Query 011416
Match_columns 486
No_of_seqs 471 out of 1247
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 01:07:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011416.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011416hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 2.3E-46 5E-51 368.9 41.5 464 11-476 153-740 (742)
2 KOG0253 Synaptic vesicle trans 100.0 4.8E-43 1E-47 300.7 33.5 456 10-477 63-527 (528)
3 TIGR00887 2A0109 phosphate:H+ 100.0 1.8E-42 3.9E-47 337.8 39.4 432 14-483 5-502 (502)
4 COG2271 UhpC Sugar phosphate p 100.0 2.3E-43 4.9E-48 311.0 25.7 406 14-469 18-434 (448)
5 PRK11551 putative 3-hydroxyphe 100.0 5.8E-40 1.3E-44 313.2 38.5 384 19-468 9-395 (406)
6 PRK10077 xylE D-xylose transpo 100.0 2.1E-40 4.6E-45 323.3 36.2 426 19-483 6-471 (479)
7 COG2814 AraJ Arabinose efflux 100.0 1.5E-39 3.3E-44 291.7 37.1 377 20-470 8-387 (394)
8 PRK09556 uhpT sugar phosphate 100.0 4.5E-41 9.7E-46 325.2 29.5 414 5-468 9-448 (467)
9 TIGR02332 HpaX 4-hydroxyphenyl 100.0 5.7E-40 1.2E-44 311.8 34.8 397 20-457 3-409 (412)
10 PRK10642 proline/glycine betai 100.0 3.2E-39 6.9E-44 313.7 40.6 396 24-477 15-437 (490)
11 PRK11663 regulatory protein Uh 100.0 8.3E-40 1.8E-44 313.3 35.6 404 19-475 17-430 (434)
12 TIGR00898 2A0119 cation transp 100.0 9E-40 2E-44 320.6 35.1 388 46-479 110-504 (505)
13 KOG0569 Permease of the major 100.0 2.1E-39 4.6E-44 299.9 35.4 425 25-483 11-468 (485)
14 TIGR00879 SP MFS transporter, 100.0 6E-39 1.3E-43 314.0 37.0 423 27-477 30-478 (481)
15 PRK12307 putative sialic acid 100.0 1.1E-38 2.4E-43 306.5 37.2 374 20-450 13-389 (426)
16 PRK03545 putative arabinose tr 100.0 2.4E-38 5.1E-43 299.9 37.4 372 22-469 6-380 (390)
17 TIGR00891 2A0112 putative sial 100.0 3E-38 6.4E-43 302.0 37.3 388 19-451 6-398 (405)
18 PRK10406 alpha-ketoglutarate t 100.0 1.8E-37 3.9E-42 297.2 40.4 377 21-468 18-423 (432)
19 TIGR00903 2A0129 major facilit 100.0 4.3E-38 9.3E-43 292.4 34.5 355 37-466 3-362 (368)
20 PRK09705 cynX putative cyanate 100.0 3.2E-37 7E-42 291.5 35.7 377 23-477 8-389 (393)
21 PRK09952 shikimate transporter 100.0 1.5E-36 3.2E-41 290.8 40.0 382 22-468 19-432 (438)
22 PRK10489 enterobactin exporter 100.0 2.5E-37 5.5E-42 295.5 34.1 386 33-486 25-416 (417)
23 TIGR00895 2A0115 benzoate tran 100.0 1.8E-36 3.8E-41 289.1 37.8 388 16-441 8-397 (398)
24 PRK11273 glpT sn-glycerol-3-ph 100.0 1.3E-36 2.8E-41 292.8 36.5 399 19-469 23-435 (452)
25 PRK15075 citrate-proton sympor 100.0 5.5E-36 1.2E-40 287.2 40.1 358 23-448 13-398 (434)
26 PRK03699 putative transporter; 100.0 1.8E-36 3.9E-41 287.1 35.7 375 22-469 4-380 (394)
27 PRK03893 putative sialic acid 100.0 1.9E-36 4.1E-41 296.7 35.3 416 19-459 14-443 (496)
28 TIGR00890 2A0111 Oxalate/Forma 100.0 3.7E-37 8.1E-42 291.5 28.5 365 29-462 7-375 (377)
29 PRK05122 major facilitator sup 100.0 6.8E-36 1.5E-40 284.4 36.4 365 25-469 15-389 (399)
30 PLN00028 nitrate transmembrane 100.0 1.6E-36 3.5E-41 293.0 32.0 392 15-469 26-433 (476)
31 PRK10213 nepI ribonucleoside t 100.0 2.3E-35 5.1E-40 278.5 39.3 368 21-464 16-386 (394)
32 TIGR00893 2A0114 d-galactonate 100.0 1.6E-36 3.4E-41 289.5 30.4 383 34-466 3-396 (399)
33 PRK14995 methyl viologen resis 100.0 1.5E-35 3.3E-40 288.2 37.6 393 22-444 3-413 (495)
34 TIGR00894 2A0114euk Na(+)-depe 100.0 7.3E-36 1.6E-40 289.5 34.8 396 19-468 13-449 (465)
35 PRK12382 putative transporter; 100.0 5.1E-35 1.1E-39 277.5 36.3 363 26-468 16-388 (392)
36 PRK15034 nitrate/nitrite trans 100.0 4.5E-35 9.8E-40 273.0 34.7 373 20-469 29-454 (462)
37 COG2223 NarK Nitrate/nitrite t 100.0 1.7E-35 3.6E-40 262.1 29.5 382 19-472 8-404 (417)
38 PRK15402 multidrug efflux syst 100.0 1.8E-34 4E-39 274.9 38.0 380 20-468 8-394 (406)
39 TIGR00892 2A0113 monocarboxyla 100.0 8.9E-36 1.9E-40 286.3 29.0 397 18-463 12-415 (455)
40 PRK10091 MFS transport protein 100.0 3.5E-34 7.6E-39 270.3 37.4 367 27-469 5-376 (382)
41 TIGR00712 glpT glycerol-3-phos 100.0 6.2E-35 1.3E-39 280.2 31.5 403 20-473 22-437 (438)
42 PRK10504 putative transporter; 100.0 1.7E-33 3.8E-38 273.6 41.1 391 26-447 11-418 (471)
43 TIGR00900 2A0121 H+ Antiporter 100.0 3.2E-34 6.8E-39 270.2 33.7 352 30-446 4-365 (365)
44 PRK09874 drug efflux system pr 100.0 1.3E-33 2.9E-38 269.9 36.8 373 28-469 17-398 (408)
45 KOG0254 Predicted transporter 100.0 3.6E-34 7.9E-39 279.3 32.7 427 24-482 44-496 (513)
46 PRK03633 putative MFS family t 100.0 3.1E-33 6.8E-38 263.9 37.9 360 27-466 8-369 (381)
47 TIGR00711 efflux_EmrB drug res 100.0 2.5E-33 5.4E-38 274.2 36.7 391 26-445 3-411 (485)
48 TIGR00899 2A0120 sugar efflux 100.0 5.3E-33 1.1E-37 262.8 37.3 364 32-468 4-373 (375)
49 TIGR00710 efflux_Bcr_CflA drug 100.0 6.7E-33 1.5E-37 263.1 36.3 346 28-443 8-360 (385)
50 TIGR00897 2A0118 polyol permea 100.0 1E-32 2.2E-37 262.0 37.5 367 33-468 21-400 (402)
51 TIGR00881 2A0104 phosphoglycer 100.0 1.6E-34 3.5E-39 273.7 24.3 369 32-450 2-378 (379)
52 PRK11195 lysophospholipid tran 100.0 8.2E-33 1.8E-37 261.1 35.7 370 30-469 8-380 (393)
53 KOG0252 Inorganic phosphate tr 100.0 2.9E-35 6.2E-40 261.1 17.4 433 20-483 36-511 (538)
54 PRK10133 L-fucose transporter; 100.0 1.4E-32 3.1E-37 262.1 37.2 373 21-463 22-427 (438)
55 PF07690 MFS_1: Major Facilita 100.0 1.1E-33 2.5E-38 265.1 28.7 343 31-435 2-352 (352)
56 PRK10473 multidrug efflux syst 100.0 4.4E-32 9.5E-37 257.5 39.7 352 30-456 8-361 (392)
57 cd06174 MFS The Major Facilita 100.0 1.2E-32 2.6E-37 258.0 34.7 346 29-467 3-350 (352)
58 PRK11043 putative transporter; 100.0 4.3E-32 9.3E-37 258.3 38.4 343 31-447 12-360 (401)
59 PRK15403 multidrug efflux syst 100.0 6.8E-32 1.5E-36 256.4 37.6 362 31-462 22-390 (413)
60 KOG0255 Synaptic vesicle trans 100.0 4.3E-32 9.4E-37 266.5 37.1 392 53-484 111-507 (521)
61 KOG2532 Permease of the major 100.0 1.3E-32 2.7E-37 258.6 31.1 365 52-469 65-447 (466)
62 TIGR00883 2A0106 metabolite-pr 100.0 4.2E-32 9.1E-37 258.5 33.3 356 35-456 3-388 (394)
63 PF00083 Sugar_tr: Sugar (and 100.0 1.3E-39 2.9E-44 315.0 -18.8 415 31-483 6-450 (451)
64 PRK11646 multidrug resistance 100.0 1.5E-31 3.3E-36 253.1 34.7 358 35-466 20-385 (400)
65 PRK11010 ampG muropeptide tran 100.0 5.5E-31 1.2E-35 254.8 38.9 372 29-469 16-403 (491)
66 PRK15011 sugar efflux transpor 100.0 4.3E-31 9.2E-36 250.1 36.3 361 33-468 23-390 (393)
67 TIGR00902 2A0127 phenyl propri 100.0 3.9E-31 8.5E-36 249.4 34.8 360 30-464 9-374 (382)
68 TIGR00885 fucP L-fucose:H+ sym 100.0 8.2E-31 1.8E-35 247.8 36.6 359 27-458 5-401 (410)
69 PRK10054 putative transporter; 100.0 3.1E-31 6.8E-36 250.5 32.9 364 32-466 14-381 (395)
70 PRK11652 emrD multidrug resist 100.0 1.6E-30 3.5E-35 247.0 38.0 350 23-444 6-360 (394)
71 KOG1330 Sugar transporter/spin 100.0 9.3E-34 2E-38 252.8 12.0 369 19-446 27-414 (493)
72 KOG2533 Permease of the major 100.0 1E-31 2.2E-36 252.8 26.3 384 19-451 39-438 (495)
73 PRK11102 bicyclomycin/multidru 100.0 1.1E-30 2.4E-35 246.8 33.2 333 39-439 5-344 (377)
74 KOG2504 Monocarboxylate transp 100.0 7.1E-32 1.5E-36 256.8 24.4 426 18-469 39-476 (509)
75 PRK09528 lacY galactoside perm 100.0 1.8E-30 3.9E-35 248.4 31.7 377 32-471 17-405 (420)
76 TIGR00886 2A0108 nitrite extru 100.0 3.5E-31 7.6E-36 249.4 25.7 344 28-430 4-365 (366)
77 PRK11128 putative 3-phenylprop 100.0 9.4E-30 2E-34 240.1 35.3 355 34-463 13-373 (382)
78 PRK11902 ampG muropeptide tran 100.0 3E-29 6.5E-34 238.4 38.3 366 31-469 5-390 (402)
79 TIGR00889 2A0110 nucleoside tr 100.0 1.2E-29 2.6E-34 241.0 35.2 381 31-477 8-410 (418)
80 TIGR00896 CynX cyanate transpo 100.0 2.4E-30 5.3E-35 242.1 29.7 332 41-448 16-352 (355)
81 PF05977 MFS_3: Transmembrane 100.0 1.6E-28 3.4E-33 235.2 34.9 376 26-467 11-392 (524)
82 KOG2615 Permease of the major 100.0 8.7E-30 1.9E-34 221.0 22.2 353 57-461 65-432 (451)
83 TIGR00901 2A0125 AmpG-related 100.0 1.2E-28 2.7E-33 230.8 30.2 321 41-428 4-355 (356)
84 COG0738 FucP Fucose permease [ 100.0 4E-28 8.6E-33 213.8 30.9 366 24-462 12-402 (422)
85 TIGR00882 2A0105 oligosacchari 100.0 3.4E-28 7.4E-33 231.0 32.9 371 29-466 6-392 (396)
86 PRK06814 acylglycerophosphoeth 100.0 1.9E-28 4.2E-33 262.7 33.9 368 28-459 18-412 (1140)
87 TIGR00924 yjdL_sub1_fam amino 100.0 1.7E-27 3.7E-32 229.3 35.4 417 27-470 12-469 (475)
88 PRK08633 2-acyl-glycerophospho 100.0 1.8E-27 3.9E-32 256.4 36.5 344 38-443 23-383 (1146)
89 TIGR00806 rfc RFC reduced fola 100.0 3.6E-28 7.8E-33 221.8 23.3 357 38-437 39-408 (511)
90 PTZ00207 hypothetical protein; 100.0 4.8E-27 1E-31 225.4 32.2 430 20-469 23-552 (591)
91 PRK10207 dipeptide/tripeptide 100.0 9.7E-27 2.1E-31 223.9 34.1 418 25-469 14-476 (489)
92 COG2807 CynX Cyanate permease 100.0 1.1E-26 2.4E-31 201.5 30.7 369 24-468 11-384 (395)
93 KOG3764 Vesicular amine transp 100.0 3.4E-29 7.3E-34 218.7 14.4 345 53-468 99-453 (464)
94 TIGR00792 gph sugar (Glycoside 100.0 6.3E-27 1.4E-31 225.8 31.9 335 46-448 21-384 (437)
95 TIGR02718 sider_RhtX_FptX side 100.0 4.9E-26 1.1E-30 215.7 36.7 367 27-464 3-386 (390)
96 TIGR00805 oat sodium-independe 100.0 2E-27 4.3E-32 234.9 24.4 372 28-444 36-581 (633)
97 PF06609 TRI12: Fungal trichot 100.0 1.6E-25 3.5E-30 213.3 36.0 388 31-443 50-466 (599)
98 PRK09584 tppB putative tripept 100.0 1.8E-25 4E-30 216.4 33.1 411 30-469 26-479 (500)
99 TIGR01301 GPH_sucrose GPH fami 99.9 2.1E-23 4.5E-28 196.5 34.4 394 33-474 12-476 (477)
100 PF03825 Nuc_H_symport: Nucleo 99.9 4.1E-23 9E-28 192.4 36.0 371 31-471 8-397 (400)
101 TIGR00788 fbt folate/biopterin 99.9 4.1E-24 8.9E-29 205.3 26.7 369 24-446 25-415 (468)
102 PF01306 LacY_symp: LacY proto 99.9 5.2E-23 1.1E-27 187.6 29.1 380 30-476 12-407 (412)
103 PRK09669 putative symporter Ya 99.9 1.5E-22 3.2E-27 195.0 32.3 331 46-447 31-391 (444)
104 PF11700 ATG22: Vacuole efflux 99.9 8.2E-21 1.8E-25 180.4 40.6 348 61-469 71-468 (477)
105 KOG4686 Predicted sugar transp 99.9 1.7E-24 3.6E-29 180.4 11.3 384 22-470 41-444 (459)
106 PRK15462 dipeptide/tripeptide 99.9 2E-21 4.3E-26 183.9 33.0 382 27-441 11-437 (493)
107 PRK10429 melibiose:sodium symp 99.9 3.9E-21 8.6E-26 186.1 28.9 347 35-447 16-396 (473)
108 KOG2563 Permease of the major 99.9 5.1E-21 1.1E-25 171.2 23.9 395 18-478 38-459 (480)
109 PF13347 MFS_2: MFS/sugar tran 99.9 9.7E-21 2.1E-25 181.5 26.9 333 46-448 23-388 (428)
110 TIGR01272 gluP glucose/galacto 99.9 3.2E-20 6.9E-25 168.5 27.2 277 109-455 6-301 (310)
111 PRK09848 glucuronide transport 99.9 9.3E-20 2E-24 175.9 30.8 330 47-447 31-391 (448)
112 PRK11462 putative transporter; 99.9 6.9E-19 1.5E-23 169.2 35.2 329 47-447 32-390 (460)
113 COG2270 Permeases of the major 99.9 3.5E-19 7.5E-24 158.8 29.8 350 60-472 58-431 (438)
114 COG2211 MelB Na+/melibiose sym 99.8 5.4E-18 1.2E-22 156.3 30.9 333 48-447 36-399 (467)
115 KOG2325 Predicted transporter/ 99.8 7E-20 1.5E-24 169.0 17.8 391 16-469 25-475 (488)
116 COG3104 PTR2 Dipeptide/tripept 99.8 3.7E-17 7.9E-22 149.4 28.0 413 26-472 22-490 (498)
117 PF03209 PUCC: PUCC protein; 99.8 5.8E-16 1.3E-20 138.9 31.5 329 50-444 5-363 (403)
118 KOG2816 Predicted transporter 99.7 6.9E-15 1.5E-19 138.4 28.2 361 26-445 23-393 (463)
119 PRK10642 proline/glycine betai 99.7 2.2E-16 4.7E-21 154.0 18.8 183 40-222 265-458 (490)
120 PF03137 OATP: Organic Anion T 99.7 5.4E-19 1.2E-23 170.4 -0.4 376 30-444 8-514 (539)
121 KOG3626 Organic anion transpor 99.7 1.4E-15 3.1E-20 146.5 21.6 374 26-444 98-649 (735)
122 PF01770 Folate_carrier: Reduc 99.7 9.1E-14 2E-18 126.5 28.6 362 42-434 21-392 (412)
123 PF03092 BT1: BT1 family; Int 99.7 2.1E-14 4.6E-19 136.3 22.2 343 45-446 10-382 (433)
124 TIGR00880 2_A_01_02 Multidrug 99.6 1.3E-15 2.9E-20 122.1 9.9 135 66-200 4-140 (141)
125 TIGR00889 2A0110 nucleoside tr 99.6 4.2E-15 9E-20 141.6 13.9 157 46-202 229-406 (418)
126 PRK15011 sugar efflux transpor 99.6 1.2E-14 2.6E-19 137.9 16.5 154 46-200 237-392 (393)
127 PRK09528 lacY galactoside perm 99.6 1.3E-14 2.7E-19 139.2 15.3 149 53-201 255-406 (420)
128 COG2271 UhpC Sugar phosphate p 99.6 1.6E-14 3.6E-19 129.0 14.0 185 277-472 23-209 (448)
129 TIGR01299 synapt_SV2 synaptic 99.6 3.7E-14 8.1E-19 141.3 17.0 139 63-202 598-737 (742)
130 TIGR02332 HpaX 4-hydroxyphenyl 99.6 1E-13 2.2E-18 132.1 19.4 180 283-473 8-193 (412)
131 PRK11663 regulatory protein Uh 99.6 1.6E-13 3.6E-18 131.8 20.3 147 322-468 51-197 (434)
132 PRK10054 putative transporter; 99.6 1E-13 2.2E-18 131.4 18.5 172 287-469 11-182 (395)
133 PF07690 MFS_1: Major Facilita 99.6 1.4E-13 3.1E-18 128.8 19.5 149 322-470 25-173 (352)
134 PRK10213 nepI ribonucleoside t 99.6 1.8E-13 3.8E-18 129.7 20.1 150 322-471 48-197 (394)
135 PF05631 DUF791: Protein of un 99.6 1.5E-12 3.2E-17 115.4 24.0 179 19-202 32-220 (354)
136 PRK03545 putative arabinose tr 99.6 1.4E-13 3.1E-18 130.5 19.2 150 322-471 37-186 (390)
137 COG2814 AraJ Arabinose efflux 99.6 2.1E-13 4.5E-18 123.7 18.8 179 281-470 11-189 (394)
138 TIGR00890 2A0111 Oxalate/Forma 99.6 2.3E-14 5.1E-19 135.5 13.5 146 46-191 226-374 (377)
139 cd06174 MFS The Major Facilita 99.6 9.1E-14 2E-18 130.1 17.3 163 35-197 185-350 (352)
140 TIGR00710 efflux_Bcr_CflA drug 99.6 1.2E-13 2.7E-18 131.0 18.3 152 322-473 33-184 (385)
141 PRK11551 putative 3-hydroxyphe 99.6 1E-13 2.3E-18 132.4 17.2 157 43-199 238-396 (406)
142 PRK05122 major facilitator sup 99.6 1.7E-13 3.6E-18 130.6 17.1 154 46-201 237-391 (399)
143 TIGR00899 2A0120 sugar efflux 99.5 1.2E-13 2.7E-18 130.6 15.6 149 50-199 225-374 (375)
144 PRK10504 putative transporter; 99.5 4.6E-13 1E-17 130.5 19.8 178 283-471 10-187 (471)
145 TIGR00895 2A0115 benzoate tran 99.5 2.1E-13 4.5E-18 130.1 17.1 174 288-472 22-195 (398)
146 TIGR00902 2A0127 phenyl propri 99.5 1.3E-13 2.8E-18 130.3 15.2 155 39-195 219-375 (382)
147 TIGR00891 2A0112 putative sial 99.5 6.3E-13 1.4E-17 127.1 19.3 169 282-461 11-181 (405)
148 PRK14995 methyl viologen resis 99.5 8.8E-13 1.9E-17 128.8 20.2 177 285-472 8-185 (495)
149 PRK15462 dipeptide/tripeptide 99.5 7E-13 1.5E-17 126.2 18.7 174 283-466 9-186 (493)
150 TIGR00924 yjdL_sub1_fam amino 99.5 6.2E-13 1.3E-17 128.6 18.7 175 284-466 11-189 (475)
151 TIGR00893 2A0114 d-galactonate 99.5 1.9E-13 4.2E-18 130.2 15.1 151 322-472 22-172 (399)
152 PLN00028 nitrate transmembrane 99.5 1.6E-12 3.5E-17 126.1 21.6 178 280-469 33-219 (476)
153 PRK09874 drug efflux system pr 99.5 2.6E-13 5.7E-18 129.8 15.9 154 43-196 237-395 (408)
154 PRK03699 putative transporter; 99.5 1.4E-12 3.1E-17 123.8 20.7 173 283-466 7-180 (394)
155 PRK15402 multidrug efflux syst 99.5 8.5E-13 1.9E-17 126.0 18.9 152 322-473 41-192 (406)
156 TIGR00711 efflux_EmrB drug res 99.5 4.9E-13 1.1E-17 131.1 17.6 151 322-472 30-180 (485)
157 PRK12382 putative transporter; 99.5 3.2E-13 7E-18 128.3 15.6 150 44-195 235-385 (392)
158 PRK03893 putative sialic acid 99.5 1.1E-12 2.4E-17 128.9 19.8 167 279-456 16-182 (496)
159 TIGR00900 2A0121 H+ Antiporter 99.5 7.3E-13 1.6E-17 124.7 17.8 145 324-468 29-178 (365)
160 PRK10473 multidrug efflux syst 99.5 8.8E-13 1.9E-17 125.4 18.2 152 322-473 31-182 (392)
161 PRK10489 enterobactin exporter 99.5 5E-13 1.1E-17 128.0 16.4 158 45-202 243-403 (417)
162 PRK10091 MFS transport protein 99.5 7.7E-13 1.7E-17 125.1 17.5 151 322-472 31-181 (382)
163 PRK09556 uhpT sugar phosphate 99.5 6.5E-13 1.4E-17 129.0 16.6 170 27-196 260-446 (467)
164 PRK11652 emrD multidrug resist 99.5 1.8E-12 3.9E-17 123.3 19.2 151 322-472 36-186 (394)
165 PRK15403 multidrug efflux syst 99.5 1.3E-12 2.9E-17 124.4 18.1 152 322-473 44-195 (413)
166 PRK11646 multidrug resistance 99.5 2.8E-12 6.1E-17 121.8 20.2 149 322-471 39-187 (400)
167 PRK12307 putative sialic acid 99.5 1.4E-12 3.1E-17 125.5 18.2 160 285-455 20-179 (426)
168 TIGR00892 2A0113 monocarboxyla 99.5 2.6E-13 5.7E-18 130.9 12.9 159 35-193 251-415 (455)
169 TIGR00897 2A0118 polyol permea 99.5 1.2E-12 2.7E-17 124.6 17.1 163 34-197 231-399 (402)
170 PRK11273 glpT sn-glycerol-3-ph 99.5 3E-12 6.5E-17 123.8 19.6 147 325-471 59-210 (452)
171 PRK03633 putative MFS family t 99.5 1.5E-12 3.3E-17 123.1 16.9 150 46-198 221-371 (381)
172 PRK11102 bicyclomycin/multidru 99.5 9.2E-13 2E-17 124.6 15.1 151 322-472 19-169 (377)
173 TIGR00881 2A0104 phosphoglycer 99.5 4.2E-13 9.2E-18 127.0 12.5 151 322-472 23-174 (379)
174 TIGR00712 glpT glycerol-3-phos 99.5 3E-12 6.6E-17 123.3 18.2 148 324-471 56-208 (438)
175 TIGR00886 2A0108 nitrite extru 99.5 5.5E-12 1.2E-16 118.9 19.3 170 288-468 6-187 (366)
176 TIGR00903 2A0129 major facilit 99.5 3.3E-12 7.2E-17 119.2 17.1 151 322-473 19-169 (368)
177 PRK09705 cynX putative cyanate 99.5 3.1E-12 6.7E-17 121.3 17.1 163 39-203 219-386 (393)
178 PRK10207 dipeptide/tripeptide 99.4 4.9E-12 1.1E-16 122.4 18.4 170 283-462 14-187 (489)
179 PRK11043 putative transporter; 99.4 7.3E-12 1.6E-16 119.5 19.4 148 322-469 34-181 (401)
180 KOG3762 Predicted transporter 99.4 6.1E-12 1.3E-16 115.7 17.7 146 324-469 401-547 (618)
181 PRK09584 tppB putative tripept 99.4 9.4E-12 2E-16 121.1 19.7 170 284-463 22-195 (500)
182 TIGR00883 2A0106 metabolite-pr 99.4 1.5E-12 3.3E-17 123.9 13.5 158 32-189 226-391 (394)
183 TIGR00879 SP MFS transporter, 99.4 3.3E-12 7.1E-17 125.1 16.0 178 25-202 284-474 (481)
184 KOG1330 Sugar transporter/spin 99.4 1.7E-13 3.6E-18 123.9 5.9 158 323-480 62-220 (493)
185 TIGR00880 2_A_01_02 Multidrug 99.4 2.1E-12 4.6E-17 103.3 11.2 135 337-471 6-140 (141)
186 PRK15034 nitrate/nitrite trans 99.4 4.9E-11 1.1E-15 112.4 21.9 148 323-471 64-234 (462)
187 COG2223 NarK Nitrate/nitrite t 99.4 1.3E-11 2.8E-16 110.9 16.8 179 279-470 10-194 (417)
188 PRK11010 ampG muropeptide tran 99.4 4E-11 8.7E-16 116.7 21.8 154 47-200 245-404 (491)
189 PRK11128 putative 3-phenylprop 99.4 5.1E-12 1.1E-16 119.5 15.1 146 47-194 227-374 (382)
190 PF06813 Nodulin-like: Nodulin 99.4 6.4E-12 1.4E-16 107.9 13.8 177 23-202 1-185 (250)
191 PF05977 MFS_3: Transmembrane 99.4 9.9E-12 2.2E-16 120.0 15.9 151 44-194 237-389 (524)
192 TIGR00894 2A0114euk Na(+)-depe 99.4 8.8E-12 1.9E-16 121.3 15.8 149 323-471 70-221 (465)
193 PRK11195 lysophospholipid tran 99.4 2.2E-11 4.7E-16 115.4 18.0 135 323-461 32-166 (393)
194 PRK10077 xylE D-xylose transpo 99.4 3.3E-11 7.1E-16 118.0 19.4 160 43-202 289-461 (479)
195 TIGR00882 2A0105 oligosacchari 99.4 1.8E-11 4E-16 116.4 16.7 139 56-194 250-390 (396)
196 TIGR00885 fucP L-fucose:H+ sym 99.4 5.5E-11 1.2E-15 113.0 19.2 169 286-465 6-203 (410)
197 PRK09952 shikimate transporter 99.4 3.9E-11 8.5E-16 115.4 18.4 152 50-201 276-435 (438)
198 KOG3764 Vesicular amine transp 99.4 5.2E-12 1.1E-16 111.9 10.7 154 323-476 100-254 (464)
199 TIGR02718 sider_RhtX_FptX side 99.4 2.2E-11 4.8E-16 115.6 15.6 148 47-194 230-386 (390)
200 TIGR00887 2A0109 phosphate:H+ 99.3 4.5E-11 9.8E-16 117.2 16.8 161 42-202 305-492 (502)
201 PF11700 ATG22: Vacuole efflux 99.3 1.3E-10 2.8E-15 111.1 18.4 161 41-201 298-470 (477)
202 KOG2615 Permease of the major 99.3 1.7E-11 3.6E-16 108.1 10.1 128 324-452 63-193 (451)
203 PF02487 CLN3: CLN3 protein; 99.3 1.1E-08 2.5E-13 93.6 28.3 324 63-441 62-394 (402)
204 KOG3098 Uncharacterized conser 99.3 7.5E-09 1.6E-13 96.4 27.5 310 66-439 56-409 (461)
205 PRK10133 L-fucose transporter; 99.3 4.6E-10 1E-14 107.7 20.3 150 282-442 25-177 (438)
206 PRK10406 alpha-ketoglutarate t 99.3 4.7E-10 1E-14 107.9 19.9 129 333-461 67-211 (432)
207 PRK15075 citrate-proton sympor 99.3 2.5E-10 5.4E-15 109.9 17.9 142 37-178 250-398 (434)
208 TIGR00792 gph sugar (Glycoside 99.3 1.4E-10 3E-15 112.2 16.1 130 47-177 244-383 (437)
209 TIGR00898 2A0119 cation transp 99.3 6.7E-11 1.4E-15 116.5 13.2 147 321-471 116-265 (505)
210 KOG0637 Sucrose transporter an 99.2 2.4E-11 5.2E-16 109.8 9.0 147 25-171 32-202 (498)
211 PTZ00207 hypothetical protein; 99.2 5.8E-10 1.3E-14 108.3 19.0 162 295-470 39-206 (591)
212 PRK11902 ampG muropeptide tran 99.2 2.7E-10 5.8E-15 108.6 16.5 146 48-197 233-388 (402)
213 PF06963 FPN1: Ferroportin1 (F 99.2 1.3E-07 2.7E-12 88.5 33.5 368 28-437 5-411 (432)
214 TIGR01272 gluP glucose/galacto 99.2 3.7E-10 8E-15 102.8 15.9 158 26-186 141-302 (310)
215 TIGR00806 rfc RFC reduced fola 99.2 1.3E-09 2.7E-14 101.2 18.9 146 322-469 54-203 (511)
216 PF01306 LacY_symp: LacY proto 99.2 2.4E-10 5.2E-15 105.2 13.9 165 36-201 236-403 (412)
217 TIGR00805 oat sodium-independe 99.2 1.8E-10 3.8E-15 114.9 14.1 150 320-469 59-281 (633)
218 KOG2504 Monocarboxylate transp 99.2 7.6E-11 1.6E-15 113.3 11.0 174 26-199 299-476 (509)
219 KOG4332 Predicted sugar transp 99.2 9.2E-10 2E-14 92.3 15.5 352 41-465 53-427 (454)
220 COG3104 PTR2 Dipeptide/tripept 99.2 2.7E-10 5.9E-15 104.9 13.5 186 283-474 21-211 (498)
221 KOG0569 Permease of the major 99.2 1.6E-09 3.5E-14 101.8 18.5 180 22-202 267-458 (485)
222 PF03825 Nuc_H_symport: Nucleo 99.2 5.3E-10 1.2E-14 104.8 15.0 167 34-200 216-397 (400)
223 TIGR00896 CynX cyanate transpo 99.2 6.5E-10 1.4E-14 104.2 14.9 137 322-460 28-166 (355)
224 PF06609 TRI12: Fungal trichot 99.2 8E-10 1.7E-14 106.7 15.6 142 325-468 75-216 (599)
225 TIGR01301 GPH_sucrose GPH fami 99.2 3E-09 6.6E-14 101.1 18.9 152 322-473 32-222 (477)
226 KOG4686 Predicted sugar transp 99.2 3E-10 6.4E-15 96.0 10.2 171 24-198 266-442 (459)
227 TIGR00901 2A0125 AmpG-related 99.1 5.7E-10 1.2E-14 104.6 13.5 149 322-472 16-181 (356)
228 COG2270 Permeases of the major 99.1 9.4E-10 2E-14 99.2 13.4 160 42-201 270-431 (438)
229 PRK06814 acylglycerophosphoeth 99.1 4E-09 8.7E-14 114.3 21.1 137 329-465 52-191 (1140)
230 KOG3810 Micronutrient transpor 99.1 1.1E-09 2.4E-14 95.2 13.2 376 47-468 27-420 (433)
231 PRK08633 2-acyl-glycerophospho 99.1 1.2E-09 2.7E-14 118.6 16.7 141 49-189 257-400 (1146)
232 PRK09848 glucuronide transport 99.1 1.1E-09 2.4E-14 106.0 14.3 134 44-177 247-391 (448)
233 KOG2532 Permease of the major 99.1 1.3E-09 2.7E-14 103.7 14.0 149 322-470 66-217 (466)
234 TIGR00926 2A1704 Peptide:H+ sy 99.1 2.2E-07 4.8E-12 92.2 28.9 148 48-195 11-178 (654)
235 TIGR00769 AAA ADP/ATP carrier 99.0 5.4E-06 1.2E-10 78.7 34.7 143 26-172 8-189 (472)
236 PRK10429 melibiose:sodium symp 99.0 1.8E-08 3.9E-13 98.1 18.7 139 39-177 245-396 (473)
237 PF13347 MFS_2: MFS/sugar tran 99.0 3.9E-09 8.4E-14 101.5 13.7 147 30-176 230-386 (428)
238 COG0738 FucP Fucose permease [ 99.0 2.6E-08 5.6E-13 89.4 17.6 172 285-467 15-208 (422)
239 KOG0255 Synaptic vesicle trans 99.0 4.1E-09 8.9E-14 104.1 13.5 144 325-472 114-257 (521)
240 COG0477 ProP Permeases of the 99.0 1.5E-08 3.2E-13 93.2 15.9 157 34-190 11-176 (338)
241 KOG3574 Acetyl-CoA transporter 99.0 6.7E-08 1.5E-12 85.5 18.5 351 23-446 29-433 (510)
242 KOG0254 Predicted transporter 99.0 2.4E-08 5.3E-13 98.1 17.3 141 330-472 90-232 (513)
243 PRK09669 putative symporter Ya 99.0 1.2E-08 2.6E-13 98.6 14.7 119 59-177 263-391 (444)
244 PF06813 Nodulin-like: Nodulin 98.9 2.3E-08 4.9E-13 86.2 13.3 138 294-444 13-157 (250)
245 KOG1237 H+/oligopeptide sympor 98.9 3.2E-06 7E-11 82.5 29.6 174 22-195 34-241 (571)
246 TIGR00788 fbt folate/biopterin 98.9 1.3E-08 2.9E-13 98.4 12.9 150 51-200 279-447 (468)
247 KOG2533 Permease of the major 98.9 5.4E-08 1.2E-12 92.9 15.9 152 322-473 74-231 (495)
248 PF06779 DUF1228: Protein of u 98.9 1E-08 2.2E-13 70.9 6.8 81 37-117 4-84 (85)
249 KOG0253 Synaptic vesicle trans 98.8 3.2E-08 6.9E-13 87.3 11.0 129 69-202 390-522 (528)
250 COG2211 MelB Na+/melibiose sym 98.8 2.5E-07 5.3E-12 86.5 17.3 144 33-176 244-398 (467)
251 COG2807 CynX Cyanate permease 98.8 2.7E-07 5.8E-12 81.8 15.1 159 36-195 219-381 (395)
252 PF13000 Acatn: Acetyl-coenzym 98.7 9.2E-07 2E-11 81.9 17.7 141 29-171 4-177 (544)
253 PRK11462 putative transporter; 98.7 3.5E-07 7.6E-12 88.5 15.6 119 59-177 262-390 (460)
254 KOG3762 Predicted transporter 98.7 4.1E-08 8.9E-13 91.1 8.4 156 42-197 388-545 (618)
255 KOG0252 Inorganic phosphate tr 98.7 1.1E-07 2.3E-12 86.7 10.1 114 325-438 80-200 (538)
256 PF03209 PUCC: PUCC protein; 98.7 3.6E-06 7.8E-11 76.6 18.8 147 49-195 233-394 (403)
257 PF00083 Sugar_tr: Sugar (and 98.6 9.7E-10 2.1E-14 106.7 -6.8 143 329-472 46-194 (451)
258 PF12832 MFS_1_like: MFS_1 lik 98.6 4.2E-07 9E-12 62.7 7.7 71 30-100 5-75 (77)
259 PF05631 DUF791: Protein of un 98.6 1.6E-05 3.4E-10 71.3 19.4 152 323-475 63-222 (354)
260 TIGR00939 2a57 Equilibrative N 98.5 0.00015 3.3E-09 69.0 25.6 108 330-438 308-428 (437)
261 COG3202 ATP/ADP translocase [E 98.5 0.00064 1.4E-08 63.5 28.4 152 18-173 20-209 (509)
262 PF05978 UNC-93: Ion channel r 98.5 8E-06 1.7E-10 64.9 13.8 112 59-171 36-148 (156)
263 KOG2816 Predicted transporter 98.4 2E-05 4.4E-10 75.0 16.7 138 338-478 71-208 (463)
264 PF03219 TLC: TLC ATP/ADP tran 98.4 0.0027 5.8E-08 61.1 30.7 154 19-173 18-205 (491)
265 TIGR00926 2A1704 Peptide:H+ sy 98.3 1.7E-05 3.6E-10 79.1 15.6 145 324-468 18-181 (654)
266 PF00854 PTR2: POT family; In 98.3 5E-06 1.1E-10 78.3 11.1 107 91-197 2-121 (372)
267 KOG2325 Predicted transporter/ 98.3 1.9E-05 4.1E-10 74.3 14.1 151 324-475 66-235 (488)
268 KOG1479 Nucleoside transporter 98.1 0.00024 5.2E-09 65.1 17.2 108 331-441 284-401 (406)
269 TIGR00769 AAA ADP/ATP carrier 97.9 0.0021 4.6E-08 61.4 20.3 152 282-443 6-190 (472)
270 PF03092 BT1: BT1 family; Int 97.9 0.00045 9.7E-09 66.2 15.4 148 323-471 19-177 (433)
271 PF05978 UNC-93: Ion channel r 97.8 0.0029 6.2E-08 50.5 16.5 115 327-442 35-149 (156)
272 PF07672 MFS_Mycoplasma: Mycop 97.8 0.00023 4.9E-09 60.7 10.2 107 334-440 146-264 (267)
273 KOG2563 Permease of the major 97.6 0.00041 8.8E-09 64.0 9.7 174 27-200 268-451 (480)
274 PF12832 MFS_1_like: MFS_1 lik 97.5 0.0013 2.8E-08 45.4 8.8 47 322-368 28-74 (77)
275 KOG3880 Predicted small molecu 97.4 0.0072 1.6E-07 52.8 14.3 133 62-198 64-198 (409)
276 COG0477 ProP Permeases of the 97.2 0.035 7.7E-07 50.4 17.9 116 329-444 39-158 (338)
277 PF03137 OATP: Organic Anion T 97.2 6.5E-05 1.4E-09 73.5 -0.7 152 320-471 29-252 (539)
278 PRK03612 spermidine synthase; 97.2 0.048 1E-06 53.5 18.8 139 325-465 46-193 (521)
279 KOG3626 Organic anion transpor 97.1 0.0036 7.9E-08 62.1 10.1 153 321-473 124-347 (735)
280 PF06963 FPN1: Ferroportin1 (F 97.0 0.011 2.4E-07 55.9 12.3 147 25-171 258-415 (432)
281 PF02487 CLN3: CLN3 protein; 96.9 0.013 2.8E-07 54.6 11.4 140 30-172 252-395 (402)
282 PF00854 PTR2: POT family; In 96.9 0.0058 1.3E-07 57.6 9.7 111 360-470 2-124 (372)
283 PF01770 Folate_carrier: Reduc 96.8 0.078 1.7E-06 49.5 15.7 145 324-469 35-182 (412)
284 PF03219 TLC: TLC ATP/ADP tran 96.7 0.29 6.2E-06 47.5 18.9 153 279-443 20-205 (491)
285 PF06779 DUF1228: Protein of u 96.6 0.023 5E-07 39.7 8.3 63 322-384 20-82 (85)
286 KOG3097 Predicted membrane pro 96.6 0.5 1.1E-05 42.3 18.4 70 69-139 67-137 (390)
287 COG3202 ATP/ADP translocase [E 96.6 0.63 1.4E-05 44.2 19.5 152 281-444 25-210 (509)
288 PRK03612 spermidine synthase; 96.5 0.084 1.8E-06 51.8 14.2 138 52-191 42-189 (521)
289 PF01733 Nucleoside_tran: Nucl 96.1 0.0017 3.6E-08 59.3 0.5 105 333-438 186-304 (309)
290 KOG3098 Uncharacterized conser 96.0 0.43 9.4E-06 45.5 15.8 135 34-169 249-409 (461)
291 KOG0637 Sucrose transporter an 96.0 0.0095 2E-07 55.3 4.4 118 322-439 60-200 (498)
292 KOG1237 H+/oligopeptide sympor 95.7 0.69 1.5E-05 46.0 16.4 145 324-468 68-244 (571)
293 KOG2601 Iron transporter [Inor 95.5 0.63 1.4E-05 42.5 13.7 164 27-190 29-217 (503)
294 TIGR00939 2a57 Equilibrative N 94.7 0.66 1.4E-05 44.6 12.6 108 63-171 310-431 (437)
295 KOG4332 Predicted sugar transp 93.5 0.29 6.4E-06 42.3 6.7 154 321-475 64-226 (454)
296 KOG3574 Acetyl-CoA transporter 92.1 2.2 4.8E-05 39.3 10.5 142 283-438 31-189 (510)
297 KOG1479 Nucleoside transporter 88.4 11 0.00025 35.3 12.2 37 384-421 119-155 (406)
298 KOG4830 Predicted sugar transp 87.1 0.25 5.5E-06 42.4 0.8 64 29-92 21-93 (412)
299 KOG2765 Predicted membrane pro 84.5 29 0.00062 32.0 12.1 75 275-371 152-226 (416)
300 KOG2601 Iron transporter [Inor 84.2 29 0.00063 32.3 12.1 134 327-460 61-217 (503)
301 COG5336 Uncharacterized protei 81.2 8 0.00017 28.1 6.0 39 413-451 37-75 (116)
302 KOG3880 Predicted small molecu 80.6 4.9 0.00011 35.9 5.8 142 27-171 253-401 (409)
303 PF02990 EMP70: Endomembrane p 80.2 29 0.00063 34.4 11.8 27 274-300 252-278 (521)
304 PRK10263 DNA translocase FtsK; 79.5 50 0.0011 36.3 13.6 26 337-362 60-85 (1355)
305 PF01733 Nucleoside_tran: Nucl 79.3 0.67 1.4E-05 42.3 0.3 106 64-170 186-306 (309)
306 COG4262 Predicted spermidine s 79.0 53 0.0012 30.3 14.4 81 380-462 103-184 (508)
307 PF07672 MFS_Mycoplasma: Mycop 79.0 34 0.00073 30.1 10.3 91 65-155 146-249 (267)
308 COG5336 Uncharacterized protei 78.5 7 0.00015 28.4 5.0 39 63-101 45-84 (116)
309 COG1288 Predicted membrane pro 77.9 43 0.00094 31.7 11.1 45 159-203 199-246 (481)
310 PF06912 DUF1275: Protein of u 74.8 52 0.0011 27.9 14.1 37 143-179 157-193 (209)
311 KOG3810 Micronutrient transpor 70.2 22 0.00047 32.8 7.2 108 63-173 274-384 (433)
312 KOG2881 Predicted membrane pro 69.2 78 0.0017 27.6 10.8 33 340-372 251-283 (294)
313 PF11947 DUF3464: Protein of u 68.5 36 0.00079 27.0 7.3 41 394-434 106-146 (153)
314 KOG1278 Endosomal membrane pro 65.5 8.7 0.00019 37.1 4.0 31 326-356 356-386 (628)
315 PRK10263 DNA translocase FtsK; 61.5 49 0.0011 36.3 8.9 22 160-181 143-164 (1355)
316 COG4769 Predicted membrane pro 60.4 8.3 0.00018 30.5 2.5 51 69-125 82-132 (181)
317 COG4262 Predicted spermidine s 58.4 1.6E+02 0.0034 27.4 13.7 113 55-170 38-161 (508)
318 KOG3097 Predicted membrane pro 58.2 1.5E+02 0.0034 27.3 12.0 110 281-408 27-136 (390)
319 PF11151 DUF2929: Protein of u 57.9 47 0.001 21.2 6.3 47 156-202 10-56 (57)
320 PF02694 UPF0060: Uncharacteri 57.1 33 0.00071 25.1 4.8 52 60-111 54-105 (107)
321 PF13000 Acatn: Acetyl-coenzym 56.7 61 0.0013 31.6 7.9 61 118-178 410-471 (544)
322 PRK02237 hypothetical protein; 52.0 53 0.0012 24.1 5.2 52 60-111 56-107 (109)
323 COG2274 SunT ABC-type bacterio 51.2 3.1E+02 0.0067 28.6 12.7 25 332-356 160-184 (709)
324 TIGR02230 ATPase_gene1 F0F1-AT 50.8 90 0.0019 22.8 6.2 31 342-372 56-86 (100)
325 PF02694 UPF0060: Uncharacteri 50.0 39 0.00084 24.8 4.2 50 329-378 54-103 (107)
326 PF03547 Mem_trans: Membrane t 49.8 2.1E+02 0.0045 27.1 10.7 19 339-357 5-23 (385)
327 PF03547 Mem_trans: Membrane t 48.5 2.4E+02 0.0052 26.6 16.0 15 74-88 9-23 (385)
328 PRK13743 conjugal transfer pro 47.2 1.1E+02 0.0023 23.3 6.2 63 22-84 40-102 (141)
329 PRK02237 hypothetical protein; 43.9 69 0.0015 23.6 4.7 49 329-377 56-104 (109)
330 PF12805 FUSC-like: FUSC-like 43.6 1.9E+02 0.0041 26.0 8.9 11 381-391 22-32 (284)
331 COG2962 RarD Predicted permeas 39.8 2.8E+02 0.0061 24.9 11.3 48 329-378 99-146 (293)
332 TIGR00844 c_cpa1 na(+)/h(+) an 39.1 4.9E+02 0.011 27.5 28.1 38 152-189 105-142 (810)
333 PF06645 SPC12: Microsomal sig 38.5 72 0.0016 21.9 4.1 32 431-464 20-51 (76)
334 PF01914 MarC: MarC family int 38.1 2.5E+02 0.0054 23.8 10.2 67 401-468 22-89 (203)
335 COG1268 BioY Uncharacterized c 36.9 94 0.002 25.7 5.2 22 68-89 90-111 (184)
336 PF03606 DcuC: C4-dicarboxylat 36.4 4.1E+02 0.009 26.0 10.5 15 348-362 103-117 (465)
337 TIGR03644 marine_trans_1 proba 34.1 4.3E+02 0.0093 25.3 13.2 27 162-188 112-138 (404)
338 PF13536 EmrE: Multidrug resis 34.0 2E+02 0.0042 21.4 8.7 21 354-374 84-104 (113)
339 PF06912 DUF1275: Protein of u 33.5 3E+02 0.0064 23.3 16.4 21 427-447 171-191 (209)
340 PF07556 DUF1538: Protein of u 33.3 2.1E+02 0.0045 24.4 6.7 87 110-200 59-148 (212)
341 COG2233 UraA Xanthine/uracil p 30.8 2.1E+02 0.0044 27.8 7.1 121 27-149 18-142 (451)
342 PF02632 BioY: BioY family; I 30.6 1.2E+02 0.0027 24.0 4.8 24 68-91 61-84 (148)
343 PF06123 CreD: Inner membrane 30.3 5.1E+02 0.011 25.0 11.4 20 402-421 365-384 (430)
344 PRK10697 DNA-binding transcrip 27.0 82 0.0018 23.8 3.1 13 192-204 57-69 (118)
345 COG1079 Uncharacterized ABC-ty 26.2 5E+02 0.011 23.6 9.7 94 343-440 21-116 (304)
346 PRK10599 calcium/sodium:proton 25.9 4.2E+02 0.0092 24.9 8.0 29 39-67 236-264 (366)
347 PF05255 UPF0220: Uncharacteri 25.6 3.7E+02 0.008 21.9 10.5 61 139-199 13-79 (166)
348 TIGR01666 YCCS hypothetical me 25.3 6.9E+02 0.015 26.1 10.2 147 74-233 37-189 (704)
349 PF01102 Glycophorin_A: Glycop 25.0 56 0.0012 24.9 1.9 8 465-472 85-92 (122)
350 PF04346 EutH: Ethanolamine ut 25.0 5.7E+02 0.012 23.8 19.1 69 61-130 48-119 (354)
351 PF07760 DUF1616: Protein of u 24.5 4.9E+02 0.011 23.5 8.2 56 116-171 22-77 (287)
352 PRK11715 inner membrane protei 24.5 6.6E+02 0.014 24.4 11.3 20 403-422 372-391 (436)
353 PRK11111 hypothetical protein; 24.2 4.6E+02 0.0099 22.5 10.3 66 401-467 28-94 (214)
354 PRK15015 carbon starvation pro 23.7 8.2E+02 0.018 25.2 19.5 102 69-178 10-114 (701)
355 TIGR02230 ATPase_gene1 F0F1-AT 23.1 3.1E+02 0.0067 20.1 5.7 32 72-103 54-86 (100)
356 PF11299 DUF3100: Protein of u 23.0 71 0.0015 27.4 2.3 48 121-169 179-227 (241)
357 PRK11588 hypothetical protein; 23.0 6.7E+02 0.014 24.9 9.1 146 328-486 107-268 (506)
358 TIGR01667 YCCS_YHJK integral m 22.9 4.9E+02 0.011 27.2 8.7 133 74-219 37-175 (701)
359 PF07456 Hpre_diP_synt_I: Hept 22.6 1.5E+02 0.0033 23.5 4.0 50 67-122 68-117 (148)
360 PF10785 NADH-u_ox-rdase: NADH 22.5 2E+02 0.0044 20.3 4.2 41 72-112 30-77 (86)
361 KOG4050 Glutamate transporter 22.4 4.1E+02 0.0089 21.3 10.3 95 339-446 83-181 (188)
362 PF12805 FUSC-like: FUSC-like 22.0 4.9E+02 0.011 23.3 7.8 37 94-130 3-40 (284)
363 PF11023 DUF2614: Protein of u 21.8 3.5E+02 0.0075 20.2 5.7 10 354-363 6-15 (114)
364 PHA03242 envelope glycoprotein 21.7 4.2E+02 0.0092 25.4 7.2 53 107-159 242-299 (428)
365 PF11947 DUF3464: Protein of u 21.6 4.3E+02 0.0093 21.2 8.6 36 272-307 52-87 (153)
366 PF10639 UPF0546: Uncharacteri 21.5 1.8E+02 0.0038 21.9 3.9 13 342-354 78-90 (113)
367 PF00909 Ammonium_transp: Ammo 21.3 7.3E+02 0.016 23.7 14.2 33 145-177 108-140 (399)
368 PTZ00370 STEVOR; Provisional 21.2 1.2E+02 0.0025 27.0 3.3 20 450-469 260-279 (296)
369 TIGR01478 STEVOR variant surfa 21.1 1.2E+02 0.0026 26.9 3.3 20 450-469 264-283 (295)
370 COG1742 Uncharacterized conser 20.8 1.6E+02 0.0036 21.5 3.4 53 59-111 54-106 (109)
371 PRK03818 putative transporter; 20.2 9E+02 0.02 24.4 10.6 44 394-437 500-544 (552)
372 PF05313 Pox_P21: Poxvirus P21 20.2 5E+02 0.011 21.4 9.0 23 411-433 110-132 (189)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.3e-46 Score=368.90 Aligned_cols=464 Identities=24% Similarity=0.396 Sum_probs=356.6
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcch
Q 011416 11 DEALTHVGFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRR 90 (486)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r 90 (486)
|+..++.+.++++|.++++++++.+..+++...++.++|.+.++++++..+.+++.++++++.+++++++|+++||+|||
T Consensus 153 d~~l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR 232 (742)
T TIGR01299 153 ELIIQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK 232 (742)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 33445566788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 91 MGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAW 169 (486)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~ 169 (486)
+++++++++.+++.++++++++++.++++|++.|++.|.. +...+++.|++|+++|++.+++...+..+|.++++.++.
T Consensus 233 ~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~ 312 (742)
T TIGR01299 233 QCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAW 312 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 788899999999999999999999999999999998887
Q ss_pred HHhcC-------------CCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCC--CCchh
Q 011416 170 IIMPR-------------LDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKL--PNGKL 234 (486)
Q Consensus 170 ~l~~~-------------~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 234 (486)
.+... .+||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.++++...+.+.. +....
T Consensus 313 ~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~ 392 (742)
T TIGR01299 313 AIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVF 392 (742)
T ss_pred HHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHH
Confidence 66543 3689999998888888788888999999999999999999999988876654321 11100
Q ss_pred hh-ccccCCCCCC--CCccch-hhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011416 235 VA-RRSTLPTGER--APPELV-HLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELS 310 (486)
Q Consensus 235 ~~-~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (486)
.. +.+....+++ +..+.. ....+............+..++.+++++.++.++.+++.+++..+.+|++..|.|.+.
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~ 472 (742)
T TIGR01299 393 SVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMI 472 (742)
T ss_pred HHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000000 000000 0000000000000111223567888999999999999999999999999999999764
Q ss_pred ccccc------------CCCC-------cc--------------------------------------------------
Q 011416 311 SLDTR------------CRSP-------LM-------------------------------------------------- 321 (486)
Q Consensus 311 ~~~~~------------~~~~-------~~-------------------------------------------------- 321 (486)
+.... .+.. +.
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 552 (742)
T TIGR01299 473 KHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFI 552 (742)
T ss_pred HHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchh
Confidence 32100 0000 00
Q ss_pred ----------c----------------cCCC---------CCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHH
Q 011416 322 ----------F----------------SHHP---------QDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMF 366 (486)
Q Consensus 322 ----------~----------------~~~~---------~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~ 366 (486)
+ ..+- +.........+..++.+++.+++|+++||+|||+++.++.
T Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~ 632 (742)
T TIGR01299 553 DTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSM 632 (742)
T ss_pred hhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 0 0000 0012345566777899999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011416 367 TLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH 446 (486)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g 446 (486)
++.+++.+++.+..+....++..++.+++.++.++....+++|.+|++.|++++|+.+..+.+|++++|++.+.+.+. +
T Consensus 633 ~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~ 711 (742)
T TIGR01299 633 VLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-T 711 (742)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence 999988888777665555566666777777788889999999999999999999999999999999999999988875 4
Q ss_pred cchHHHHHHHHHHHHHHHHhcccccccCCC
Q 011416 447 QMTAVVLLVVVIVTSILSVMLIPFETKGQE 476 (486)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (486)
...++++++++.++++++.+++ ||++++.
T Consensus 712 ~~~pf~i~a~~lll~~ll~~~L-PET~~~~ 740 (742)
T TIGR01299 712 KAAPILFASAALACGGLLALKL-PDTRGQV 740 (742)
T ss_pred hHHHHHHHHHHHHHHHHHHHhC-CCCcccc
Confidence 5567777777777766666554 7887764
No 2
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=4.8e-43 Score=300.68 Aligned_cols=456 Identities=39% Similarity=0.650 Sum_probs=385.7
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 011416 10 VDEALTHVGFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGR 89 (486)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~ 89 (486)
.|+.....+++|++|........++....+.....+.+.|...+..|.+..|..++....+.|..+++-.+|.++|++||
T Consensus 63 v~ea~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~gr 142 (528)
T KOG0253|consen 63 VDEAMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGR 142 (528)
T ss_pred ehhhhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhc
Confidence 45566677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 90 RMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAW 169 (486)
Q Consensus 90 r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~ 169 (486)
|+.+.+..+...+...+.+.++|+..+++.|.+.|+|.|+.|...++-.|..|..+|...+-.. ..+.+|.++...++.
T Consensus 143 r~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law 221 (528)
T KOG0253|consen 143 RKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAW 221 (528)
T ss_pred chhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888888999999999887777 999999999999999
Q ss_pred HHhcCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCc
Q 011416 170 IIMPRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPP 249 (486)
Q Consensus 170 ~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (486)
.+..++||||.....+.+..+.....+++||+|++...+++++++.+.++++...|+.+.+..........+.++++ .
T Consensus 222 ~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~--~ 299 (528)
T KOG0253|consen 222 GVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEE--S 299 (528)
T ss_pred HHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhh--h
Confidence 99999999999999998888888899999999999999999999999999999999888776544333222222111 1
Q ss_pred cchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcc------cc
Q 011416 250 ELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLM------FS 323 (486)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 323 (486)
+.+ +...+..+.......++++++.++..++.+..++.+.+.||+...+...+.+....++.+.. +.
T Consensus 300 ~~~-------~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~ 372 (528)
T KOG0253|consen 300 DLD-------DSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELET 372 (528)
T ss_pred chh-------hhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHh
Confidence 100 01111112222367789999999999999999999999999999998887765443322211 11
Q ss_pred ---CCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhh
Q 011416 324 ---HHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAF 400 (486)
Q Consensus 324 ---~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (486)
-..+...-..-.....+..+.|.++.++++||+|||+.+..++++++++.+.+....+........+...++..+.+
T Consensus 373 ~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~f 452 (528)
T KOG0253|consen 373 RANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAF 452 (528)
T ss_pred hhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchh
Confidence 02233344556677889999999999999999999999999999999999988887777677778888889999999
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCCCc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQEL 477 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (486)
.+.+.+..|.+|+..|+++.|....++.+|+++.|++. +........+..+++++++++++...++..|+|+|..
T Consensus 453 qvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 453 QVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred eEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 99999999999999999999999999999999999998 4555566778889999999999999999999999864
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.8e-42 Score=337.79 Aligned_cols=432 Identities=22% Similarity=0.296 Sum_probs=312.8
Q ss_pred HhhcCCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhc-----CCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 011416 14 LTHVGFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEW-----NLSSTEESLITTSVFAGLVVGAYAWGLVADNYG 88 (486)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G 88 (486)
.++.+.++++++++.++.++.+..+++...++...|.+.+++ +.+..+.+++.+.+.+++.++++++|+++||+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~G 84 (502)
T TIGR00887 5 ADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLG 84 (502)
T ss_pred hhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456678889999999999999999999999999999887653 345667899999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhhhhhhcCCC------HHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHH
Q 011416 89 RRMGFLGEALVTAGAGLLSSFSPN------YITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGS 161 (486)
Q Consensus 89 ~r~~~~~~~~~~~~~~~~~~~a~~------~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 161 (486)
||+++.++.++..++.++++++++ ++.++++|+++|++.|.. +....++.|++|+++|++++++.+....+|.
T Consensus 85 rr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~ 164 (502)
T TIGR00887 85 RKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGI 164 (502)
T ss_pred cHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999888876 789999999999999998 7788999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-----------------------CCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHH-HHHH
Q 011416 162 VSEAIGAWIIMP-----------------------RLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAE-AHRA 217 (486)
Q Consensus 162 ~i~~~l~~~l~~-----------------------~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~~~ 217 (486)
++++.++..+.. ..+||+.|.+.++++++..+..+++||+|+|+..+++.++ +++.
T Consensus 165 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~ 244 (502)
T TIGR00887 165 LAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASD 244 (502)
T ss_pred HHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHH
Confidence 999988876532 2479999999888888887888899999999887776643 4444
Q ss_pred HHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhch----hhHHHHHHHHHHHH
Q 011416 218 LEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSS----KLARTTILLWLLLF 293 (486)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~ 293 (486)
+.+....+..+ +. ++. ++ .+ ++++ ....++++++++ +..+..+.....++
T Consensus 245 ~~~~~~~~~~~-~~-----------~~~------~~-~~---~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 298 (502)
T TIGR00887 245 MSAVLQVKIEA-EP-----------DEV------EK-AS---TAVE----VPKASWSDFFTHFFKWRHGKHLLGTAGSWF 298 (502)
T ss_pred HHHHhcccccc-Cc-----------ccc------cc-hh---cccc----chhhhHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 44333211100 00 000 00 00 0000 001245666543 22233333344455
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchh------------HHHHHHHHhhHHHHHHHHHHHHHHhchhHH
Q 011416 294 GNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL------------YIDEFITSLAEIPGLLLAAILVDTAGRKLS 361 (486)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~ 361 (486)
...+.+|+...+.|.+.+ +.|++.... ........++.+++.+++++++||+|||+.
T Consensus 299 ~~~~~~y~~~~~~p~i~~-----------~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~ 367 (502)
T TIGR00887 299 LLDIAFYGVNLNQKVILS-----------AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI 367 (502)
T ss_pred HHHHHHHccccccHHHHH-----------HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH
Confidence 555667776666665542 223332211 112334455677788999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhc----hhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHH
Q 011416 362 ITIMFTLSCLFLLPLVTYQ----SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLV 437 (486)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i 437 (486)
+.++..+++++++++.... .........+...++..+..+..+.+..|.+|++.|+++.|+.+.++.++++++|.+
T Consensus 368 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 447 (502)
T TIGR00887 368 QLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFG 447 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9888877777665554421 111111111222222344566778888999999999999999999999999999999
Q ss_pred HHHHHHhh----------ccchHHHHHHHHHHHHHHHHhcccccccCCCccccccc
Q 011416 438 AVALVANC----------HQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVDF 483 (486)
Q Consensus 438 ~g~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (486)
.+.+.+.. +....+++++++++++.+.. ++.||+++++.+|.++|
T Consensus 448 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 448 FLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSGE 502 (502)
T ss_pred hhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhCC
Confidence 99998843 33456788888777776654 56689999988776543
No 4
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-43 Score=311.04 Aligned_cols=406 Identities=18% Similarity=0.172 Sum_probs=327.9
Q ss_pred HhhcCCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH
Q 011416 14 LTHVGFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGF 93 (486)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~ 93 (486)
+.++..+++|+.+++.+++++...++.+.+++.+.|.+.++.++|.+|+|++.|.++++|.++..+.|.++||.++|+.+
T Consensus 18 ~~~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm 97 (448)
T COG2271 18 EIDKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee
Confidence 33445778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHH--HH
Q 011416 94 LGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGA--WI 170 (486)
Q Consensus 94 ~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~--~~ 170 (486)
..++++.++..++++++++.+.+.+..++.|..+|.. |++...++.|++++|||+..++++++.++|..+.|++. +.
T Consensus 98 ~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 98 AFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999999999 88
Q ss_pred HhcCCCcHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCc
Q 011416 171 IMPRLDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPP 249 (486)
Q Consensus 171 l~~~~~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (486)
+..+.+||..|++.++++++. ++.++..+++|+..--+ ..++.+++..+..+ +
T Consensus 178 ~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP-~ie~~~~d~~e~~~--------------------~----- 231 (448)
T COG2271 178 FAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP-PIEEYRGDPLEIYE--------------------E----- 231 (448)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-CHHHhhcCchhhhh--------------------h-----
Confidence 888899999999999998886 55566678887532111 11111100000000 0
Q ss_pred cchhhcccCCCCCccc-CCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCC
Q 011416 250 ELVHLLSSNGGNKTTE-GKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQD 328 (486)
Q Consensus 250 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (486)
+++.+ ......-.+.++++ +.++.+++......+.-|++..|.|.+. .+.+|++.
T Consensus 232 -----------~~~~~~ls~~~i~~~YVL~N---k~iW~la~a~vfvYivR~gi~dW~p~YL----------~e~k~~s~ 287 (448)
T COG2271 232 -----------EKENEGLTAWQIFVKYVLKN---KLIWLLALANVFVYVVRYGINDWGPLYL----------SEVKGFSL 287 (448)
T ss_pred -----------hccCCCccHHHHHHHHHHcC---hHHHHHHHHHHHHHHHHHHHhhhHHHHH----------HHhcCCCH
Confidence 00000 00000122233333 4466667777777788888888888766 45779999
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHh--chhHHHHH-HHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHhhhhhhhhH
Q 011416 329 ANLYIDEFITSLAEIPGLLLAAILVDTA--GRKLSITI-MFTLSCLFLLPLVTYQ--SNILTTGLLFGARMCVMGAFTVS 403 (486)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~--g~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 403 (486)
.++....+.+-+++++|.+++|+++||+ |||....+ ..+...++.+.+...+ +.+...+++++.|+...+..-..
T Consensus 288 ~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLi 367 (448)
T COG2271 288 VKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLI 367 (448)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999999999999999999999996 66665544 4444444444444433 34777788888888888888778
Q ss_pred hhhccccccccchhhHhHHHHHHHHH-HHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 404 LIYAAEIYPTSVRSTGAGAANAMGRI-GGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 404 ~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
-....|..|++..|++.|+...++++ |...+....|++.|.+||...|.++.+.++++.++.....
T Consensus 368 Gl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 368 GLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred HHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999998 9999999999999999999999988888887776666554
No 5
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=5.8e-40 Score=313.19 Aligned_cols=384 Identities=22% Similarity=0.300 Sum_probs=301.1
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
..+++|.++.+.++..+.++++....++..|.+.+++|+++.+.|++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 34688889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 99 VTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 99 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
+.+++.+++.+++|++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|..+++.++..+.+..+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 99999999999999999999999999999887 77778999999999999999999999999999999999988888999
Q ss_pred HHHHHHhHHHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcc
Q 011416 178 RWLLGLSSIPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLS 256 (486)
Q Consensus 178 ~~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (486)
|..|++.+++.++.. +...++||+|++...+++.++.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------------------------------- 208 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAP---------------------------------------- 208 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhh----------------------------------------
Confidence 999998877665543 345567887654322111110000
Q ss_pred cCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHH
Q 011416 257 SNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEF 336 (486)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (486)
..+.+++++..+.....+...+......+....+.|.+. ++.|.++.+.+....
T Consensus 209 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-----------~~~g~s~~~~~~~~~ 262 (406)
T PRK11551 209 ---------------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLL-----------VGQGLSRSQAGLVQI 262 (406)
T ss_pred ---------------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HhCCCChhhhhHHHH
Confidence 011111111112222233333333344455555566544 345788888999999
Q ss_pred HHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccch
Q 011416 337 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 416 (486)
Q Consensus 337 ~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (486)
...++.++++++.|++.||+++|+.+..+.+..+++++.+...++.+...+..++.+++..+..+..+++..|.+|++.|
T Consensus 263 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 342 (406)
T PRK11551 263 AFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVR 342 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhh
Confidence 99999999999999999999999988877776666666655555555555666677777777888889999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhccch-HHHHHHHHHHHHHHHHhcc
Q 011416 417 STGAGAANAMGRIGGMVCPLVAVALVANCHQMT-AVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 417 ~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~-~~~~~~~~~~~~~~~~~~~ 468 (486)
+++.|+.+....+|..++|.+.|.+.++.+.+. .+.....+.+++.+..+..
T Consensus 343 g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 343 GTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998765443 3444444444444444444
No 6
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.1e-40 Score=323.31 Aligned_cols=426 Identities=19% Similarity=0.219 Sum_probs=304.0
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhc--------CCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcch
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEW--------NLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRR 90 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r 90 (486)
..+++.+...+..++.+..+++...+++..|.+++++ +++..+.+++.+++.++..++++++|+++||+|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr 85 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR 85 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 3456677778888889999999999999999888877 88899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhcC---------CC---HHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHH
Q 011416 91 MGFLGEALVTAGAGLLSSFS---------PN---YITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFW 157 (486)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~a---------~~---~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~ 157 (486)
+++.++.++.+++.++++++ ++ ++.+++.|+++|++.|.. +...+++.|++|+++|++++++.+.+.
T Consensus 86 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~ 165 (479)
T PRK10077 86 DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAI 165 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHH
Confidence 99999999999988877763 22 567889999999999998 788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh--------cCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCC
Q 011416 158 TIGSVSEAIGAWIIM--------PRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKL 229 (486)
Q Consensus 158 ~~G~~i~~~l~~~l~--------~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (486)
.+|.++++.++..+. +..|||++|++.+++.++..+..+++||+|+++..+++.+++++..++.......
T Consensus 166 ~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~-- 243 (479)
T PRK10077 166 IFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLA-- 243 (479)
T ss_pred HHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhH--
Confidence 999999988776553 3579999999988888777666788999998876666655554433332111000
Q ss_pred CCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011416 230 PNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISEL 309 (486)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (486)
.... .+ ...... .+.. ..+..+...............+.....++...++.|.+
T Consensus 244 -~~~~-~~-------------~~~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 297 (479)
T PRK10077 244 -TQAL-QE-------------IKHSLD-------HGRK----TGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEI 297 (479)
T ss_pred -HHHH-HH-------------HHHHHH-------Hhhh----hhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHH
Confidence 0000 00 000000 0000 00001100000000001111111222233334445544
Q ss_pred ccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--chh--HHH
Q 011416 310 SSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY--QSN--ILT 385 (486)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~ 385 (486)
. +..|.+...........++..+++.+++++++||+|||+.+..+.++.+++.+.+... .+. ...
T Consensus 298 ~-----------~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 298 F-----------KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred H-----------HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 3 2346666666777778888999999999999999999999999998888877666432 111 122
Q ss_pred HHHHHHHHHhhhh-hhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH------HhhccchHHHHHHHHH
Q 011416 386 TGLLFGARMCVMG-AFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV------ANCHQMTAVVLLVVVI 458 (486)
Q Consensus 386 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~------~~~g~~~~~~~~~~~~ 458 (486)
....++.+++.+. ..|..+.++.|.+|++.|+++.|+.+..+++++++++.+.+.+. +..++...++++++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 2233333333332 34678899999999999999999999999999999977776544 5677778888888888
Q ss_pred HHHHHHHhcccccccCCCccccccc
Q 011416 459 VTSILSVMLIPFETKGQELSDTVDF 483 (486)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (486)
++++++.+.+.+|+|+++.+|.+++
T Consensus 447 ~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 447 VLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred HHHHHHHHhccccCCCCCHHHHHHH
Confidence 8888888878888888877765443
No 7
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=291.72 Aligned_cols=377 Identities=17% Similarity=0.160 Sum_probs=301.6
Q ss_pred CchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 011416 20 GKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALV 99 (486)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~ 99 (486)
++..+..++.+.++.|...........++|++.+|+|+|..+.|++.|.|.+++.++.|+...+.||+.||++++..+.+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 34556677778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Q 011416 100 TAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 100 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
+.++.+++++++||+.++++|++.|+..|.+ ....+...+..||++|++++++...+..++.++|.+++.++.+.+|||
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR 167 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWR 167 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHH
Confidence 9999999999999999999999999999999 777889999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhccc
Q 011416 179 WLLGLSSIPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSS 257 (486)
Q Consensus 179 ~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (486)
..|++.+.++++.. ..+..+| |+.. .++++.+.+
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP--~~~~-~~~~~~~~~------------------------------------------ 202 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP--PSEI-SGSLPGPLR------------------------------------------ 202 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--CccC-CCCCCcchh------------------------------------------
Confidence 99999999998874 4566777 2110 001101100
Q ss_pred CCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHH
Q 011416 258 NGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFI 337 (486)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (486)
...++++++..+..+....+.+ ...|....|...+. .+..|++....++....
T Consensus 203 --------------~~~~~l~~p~v~~~l~~t~l~~---~g~F~~ftYi~P~L----------~~v~g~s~~~vs~~Ll~ 255 (394)
T COG2814 203 --------------TLLRLLRRPGVLLGLLATFLFM---TGHFALYTYIRPFL----------ESVAGFSVSAVSLVLLA 255 (394)
T ss_pred --------------HHHHHhcCchHHHHHHHHHHHH---cchhhhHHhHHHHH----------HHccCCCHhHHHHHHHH
Confidence 1222233333333333333322 22222222322222 24458999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccch
Q 011416 338 TSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 416 (486)
Q Consensus 338 ~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (486)
++++.++|..++|++.|| +.|+.+.....+.++.++.+.+ ..+.+......++.++..............+.. ++.+
T Consensus 256 ~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~ 333 (394)
T COG2814 256 FGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAA 333 (394)
T ss_pred HHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCch
Confidence 999999999999999999 8888887777777777766665 445555556666667766666666677777744 4679
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccc
Q 011416 417 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 417 ~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
+.+.+++....|+|..+|..++|.+.|+.|+....+..+.+.+++.++.+...+
T Consensus 334 ~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 334 DLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998888888888888877766553
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=4.5e-41 Score=325.17 Aligned_cols=414 Identities=13% Similarity=0.072 Sum_probs=297.4
Q ss_pred CccccHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhh
Q 011416 5 GHVYTVDEALTHVGFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVA 84 (486)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~ 84 (486)
+|..+.++++.++.+.|..+.++..+++.+++.+.++..+++..|.+.+|+|++..+.|++.+++.+++.+++++.|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~ 88 (467)
T PRK09556 9 KPTLDLPLEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYA 88 (467)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHh
Confidence 44445555555556677788889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcchHHHHHHHHHHHHhhhhhhc-----CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHH
Q 011416 85 DNYGRRMGFLGEALVTAGAGLLSSF-----SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWT 158 (486)
Q Consensus 85 dr~G~r~~~~~~~~~~~~~~~~~~~-----a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 158 (486)
||+|||+++..+.++++++.++.++ ++|++.+++.|+++|++.+.. +...+++.||+|+++||+++|+...+.+
T Consensus 89 Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~ 168 (467)
T PRK09556 89 DGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHN 168 (467)
T ss_pred hccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccc
Confidence 9999999998888887777665554 689999999999999999888 7777899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC---CcHHHHHHhHHHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchh
Q 011416 159 IGSVSEAIGAWIIMPRL---DWRWLLGLSSIPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKL 234 (486)
Q Consensus 159 ~G~~i~~~l~~~l~~~~---~w~~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (486)
+|.++++++...+.+.. +||..|.+.+++.++..+. +++.+++|+..... ++ ++.. +... .
T Consensus 169 lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~---~~-~~~~------~~~~-~---- 233 (467)
T PRK09556 169 LGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG---KA-EEIF------GEPI-S---- 233 (467)
T ss_pred hhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC---Ch-hhcc------cCcc-c----
Confidence 99999999887766543 6999998888877765443 44456665421100 00 0000 0000 0
Q ss_pred hhccccCCCCCCCCccchhhcccCCCCCcccCCCchhh-hHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 011416 235 VARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSL-FLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLD 313 (486)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (486)
++++ ..+.++...... .+..++++ .++...+..++....+++...+.|.+.
T Consensus 234 --------~~~~--------------~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~p~yl--- 285 (467)
T PRK09556 234 --------EEDK--------------ETESTDMTKWQIFVEYVLKNP---VIWLLCFANIFLYIVRIGIDNWSPVYA--- 285 (467)
T ss_pred --------hhhh--------------ccccccCcHHHHHHHHHHcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 0000 000000000001 11133332 344444455555555566666777554
Q ss_pred ccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH--hhhchhHHHHHHHHH
Q 011416 314 TRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPL--VTYQSNILTTGLLFG 391 (486)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 391 (486)
.+.+|.+..+++.......++.+++.+++|+++||++||+.......+..++...+ ....+.+...+..++
T Consensus 286 -------~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (467)
T PRK09556 286 -------FQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFA 358 (467)
T ss_pred -------HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 23467888899999888999999999999999999998887665444433332222 222334344445555
Q ss_pred HHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHH-HHHHHHHHHHHHHH------------hhccchHHHHHHHHH
Q 011416 392 ARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRI-GGMVCPLVAVALVA------------NCHQMTAVVLLVVVI 458 (486)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~i~g~l~~------------~~g~~~~~~~~~~~~ 458 (486)
.|++..+..........|.+|++.+|++.|+.+..+++ |.+++|.+.|.+.| ..+|...|.+..++.
T Consensus 359 ~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~ 438 (467)
T PRK09556 359 LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAA 438 (467)
T ss_pred HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHH
Confidence 55444333333345667999999999999999999997 77999999999999 567888888887777
Q ss_pred HHHHHHHhcc
Q 011416 459 VTSILSVMLI 468 (486)
Q Consensus 459 ~~~~~~~~~~ 468 (486)
+++.+..+.+
T Consensus 439 ~~~~~~~~~~ 448 (467)
T PRK09556 439 IGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHH
Confidence 7776665544
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=5.7e-40 Score=311.77 Aligned_cols=397 Identities=17% Similarity=0.186 Sum_probs=286.1
Q ss_pred CchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 011416 20 GKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALV 99 (486)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~ 99 (486)
+|.+|+.+..+++.++++++|+.+++...|.+.+|+|++..+.|++.+++.+++.+++++.|+++||+|||+++..++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Q 011416 100 TAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP----- 173 (486)
Q Consensus 100 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~----- 173 (486)
.+++.+++++++|++.+++.|+++|++.+.. +....++.|++|+++|++++++++.+.++|.++++++++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999988 6677889999999999999999999999999999999988763
Q ss_pred -CCCcHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccc
Q 011416 174 -RLDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPEL 251 (486)
Q Consensus 174 -~~~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (486)
..|||+.|++.++++++. .+.++++||+|+... .-.+++++..++..+.+..+.+ + +.
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~--~l~~~~~~~~~~~~~~~~~~~~-------------~---~~-- 222 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAK--WLDEEDKKALKEMIDNDQLTLE-------------Q---PE-- 222 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCC--CCCHHHHHHHHHHHHhcccccc-------------c---cc--
Confidence 469999999988887765 445667788875210 0011111111111000000000 0 00
Q ss_pred hhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchh
Q 011416 252 VHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL 331 (486)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (486)
....++.......++.++++ .++.....+++....++....+.|.+.+.. ..+.+..++
T Consensus 223 --------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---------~~~~s~~~~ 281 (412)
T TIGR02332 223 --------GAFAHAAMPQRSMLREIFTP----AIMLYTLAYFCLTNTLSAINIWTPQILQSF---------NQGSSNIMI 281 (412)
T ss_pred --------cccccccccHHHHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCCCcHHHh
Confidence 00000000001133444432 334445555566666777777777766210 125677788
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhchhHH-HHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhcccc
Q 011416 332 YIDEFITSLAEIPGLLLAAILVDTAGRKLS-ITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEI 410 (486)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (486)
+.......++.+++.++.|+++||+++|+. .....++..+.+++.....+.........+.+++.....+..+....|.
T Consensus 282 ~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 361 (412)
T TIGR02332 282 GLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQS 361 (412)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccc
Confidence 888999999999999999999999987664 3334334444332222222222222222222333333334455666788
Q ss_pred ccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHH
Q 011416 411 YPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVV 457 (486)
Q Consensus 411 ~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~ 457 (486)
+|++.|++++|+.+...++|++++|.+.|.+.|..| |...+...+++
T Consensus 362 ~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 362 ISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999999999999999999876 66666655543
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=3.2e-39 Score=313.74 Aligned_cols=396 Identities=17% Similarity=0.167 Sum_probs=283.2
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcch-hHH-----HHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHH
Q 011416 24 CFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTE-ESL-----ITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEA 97 (486)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~-----~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~ 97 (486)
+..+...+++++++++|...++...|.+.++++.+.++ .++ +.++.++++.++++++|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 44667778899999999999999999999999754432 222 257788999999999999999999999999999
Q ss_pred HHHHHhhhhhhcCCCHHH--------HHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011416 98 LVTAGAGLLSSFSPNYIT--------LITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGA 168 (486)
Q Consensus 98 ~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~ 168 (486)
++++++++++++++|+++ +++.|+++|++.|.. +...+++.|++|+++||++.++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 889999999999988 77788999999999999999999999888988888766
Q ss_pred HHHh--------cCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhcccc
Q 011416 169 WIIM--------PRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRST 240 (486)
Q Consensus 169 ~~l~--------~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (486)
..+. ..+|||+.|++.+++.++.+++...+||+|++...+++.++.. .+..
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~----------~~~~----------- 233 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD----------REGL----------- 233 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc----------cccc-----------
Confidence 5443 3689999999987766666666677899887642211110000 0000
Q ss_pred CCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCc
Q 011416 241 LPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPL 320 (486)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (486)
. + ....++++++++ .++.........+.....+|....+.|.+.+
T Consensus 234 ---------------------~-~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~--------- 278 (490)
T PRK10642 234 ---------------------Q-D---GPKVSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLS--------- 278 (490)
T ss_pred ---------------------c-c---cccCCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 0 0 000134455543 2233333333344455667777777776542
Q ss_pred cccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-Hhh--hchhHHHHHHHHHHHHhhh
Q 011416 321 MFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLP-LVT--YQSNILTTGLLFGARMCVM 397 (486)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 397 (486)
+..|.+............++.+++.++.|+++||+|||+.+..+.++..+..+. +.. ..+........++.+++.+
T Consensus 279 -~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 357 (490)
T PRK10642 279 -HNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILN 357 (490)
T ss_pred -HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 234677777777777778888999999999999999999887776543332222 221 2233334444455556555
Q ss_pred hhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHhcccccccCCC
Q 011416 398 GAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIPFETKGQE 476 (486)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (486)
...+....+..|.+|++.|+++.|+.+....+++.++|.+.+++.+..+ +..++++..+..+++.+..++ .||++++.
T Consensus 358 ~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~pes~~~~ 436 (490)
T PRK10642 358 CFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT-MKETANRP 436 (490)
T ss_pred HHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH-hccccCCC
Confidence 5666677778899999999999998777777888999999999988765 454555555555555554444 36766544
Q ss_pred c
Q 011416 477 L 477 (486)
Q Consensus 477 ~ 477 (486)
.
T Consensus 437 ~ 437 (490)
T PRK10642 437 L 437 (490)
T ss_pred C
Confidence 3
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=8.3e-40 Score=313.30 Aligned_cols=404 Identities=15% Similarity=0.130 Sum_probs=289.1
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
.+++++.++....+.++..++++..++...|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~ 96 (434)
T PRK11663 17 YRYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI 96 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH
Confidence 44556677777888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 99 VTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 99 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
+.+++.+++++++|++.+++.|++.|++.|.. +...+++.|++|+++|++++++.+.+.++|..+++.+++.+.+.+||
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw 176 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW 176 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence 99999999999999999999999999999877 77778999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcc
Q 011416 178 RWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLS 256 (486)
Q Consensus 178 ~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (486)
|+.|++.+++.++. ++..++++|+|++...+...+..++. + +..
T Consensus 177 ~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---------------------~---~~~----------- 221 (434)
T PRK11663 177 RYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA---------------------L---ELA----------- 221 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc---------------------c---ccc-----------
Confidence 99999988876654 34455677766432101000000000 0 000
Q ss_pred cCCCCCcccCCCchh-hhH-hhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHH
Q 011416 257 SNGGNKTTEGKSGLS-LFL-MLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYID 334 (486)
Q Consensus 257 ~~~~~~~~~~~~~~~-~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (486)
++.++.+.+.. .++ ..++++ .++......+.....++.+..+.|.+. .++.|.+..+++..
T Consensus 222 ----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~l----------~~~~g~s~~~a~~~ 284 (434)
T PRK11663 222 ----QQQEGAGLSRKEILTKYVLLNP---YIWLLSFSYVLVYVVRAAINDWGNLYM----------SETLGVDLVTANSA 284 (434)
T ss_pred ----hhccccCCChhhhHHHHHhcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhccCCCHHHHHHH
Confidence 00000000000 111 122222 233333334444445555555666544 13457888889999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHh--chh-HHHHHHH---HHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhcc
Q 011416 335 EFITSLAEIPGLLLAAILVDTA--GRK-LSITIMF---TLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAA 408 (486)
Q Consensus 335 ~~~~~i~~~~~~~~~g~l~dr~--g~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (486)
.....+++++++++.|+++||+ ++| ....... ....+....+. ..+........+..+++..+..........
T Consensus 285 ~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 363 (434)
T PRK11663 285 VSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAA 363 (434)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999999998 333 3222211 11111111111 222222222233333333323333455678
Q ss_pred ccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCC
Q 011416 409 EIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQ 475 (486)
Q Consensus 409 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (486)
|..|++.++++.|+.+...++|++++|.+.|++.|..|+...+...+++.+++++..+...++++++
T Consensus 364 ~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 364 ECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred hcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 9999999999999999999999999999999999999999999888888888777666655444443
No 12
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=9e-40 Score=320.55 Aligned_cols=388 Identities=32% Similarity=0.583 Sum_probs=303.0
Q ss_pred chhchhhhhcCCC---cchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHH
Q 011416 46 FVGPTVKSEWNLS---STEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCL 122 (486)
Q Consensus 46 ~~~~~~~~~~~~s---~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 122 (486)
+..|.+.+|+|++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++.++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678899999999 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCCC
Q 011416 123 VGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPES 201 (486)
Q Consensus 123 ~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 201 (486)
.|++.+.. +...+++.|++|+++|+++.++...+..+|.++++.++..+. +||+.|++.+++.++..+..+++||+
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~~~~~~~~es 266 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTFLFFLLSWFVPES 266 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999997 788899999999999999999999999999999999987764 39999999998888877777889999
Q ss_pred chhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhh
Q 011416 202 PRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKL 281 (486)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 281 (486)
|+|...+++.+++.+..++..+.++.+.+.+......+ ++..+ +.+...++++++++.
T Consensus 267 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~-~~~~~~~~~l~~~~~ 324 (505)
T TIGR00898 267 PRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLE---------------------KDLSS-SKKQYSFLDLFRTPN 324 (505)
T ss_pred hHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhh---------------------hhhhh-ccCCCcHHHHhCChH
Confidence 99998888888888887777665543222111000000 00000 001124566665544
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhH
Q 011416 282 A-RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 360 (486)
Q Consensus 282 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~ 360 (486)
. +..+..+..++.....+++...+.+.+. .+ ........++..+++.++.+++.||+|||+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr~ 386 (505)
T TIGR00898 325 LRKTTLCLMMLWFTTAFSYYGLVLDLGNLG---------------GN---IYLDLFISGLVELPAKLITLLLIDRLGRRY 386 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccC---------------CC---hHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 3 3344445555666666666655544322 22 334555667888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhchh--HHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHH
Q 011416 361 SITIMFTLSCLFLLPLVTYQSN--ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 438 (486)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~ 438 (486)
.+.++.++.+++++++...++. +......++.+++....++..+.+..|.+|++.|+++.|+.+....+|++++|.+.
T Consensus 387 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~ 466 (505)
T TIGR00898 387 TMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLV 466 (505)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHH
Confidence 9999988888877766654333 44445555666777777888999999999999999999999999999999999999
Q ss_pred HHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCCCccc
Q 011416 439 VALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSD 479 (486)
Q Consensus 439 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (486)
+ .+..+...++.+++++.+++.++.++ .||+++++.+|
T Consensus 467 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~~~l~~ 504 (505)
T TIGR00898 467 Y--LGEKWLFLPLVLFGGLALLAGILTLF-LPETKGVPLPE 504 (505)
T ss_pred H--HHHHHHhhHHHHHHHHHHHHHHHHHc-CcCCCCCCCCC
Confidence 8 44456677888888888777766654 46888877654
No 13
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=299.89 Aligned_cols=425 Identities=21% Similarity=0.298 Sum_probs=319.9
Q ss_pred HHHHHHHHHHHHHHhhHhhhhchhchh--------hhhcCC--Ccch----hHHHHHHHHHHHHHHHHHHhhhhhhhcch
Q 011416 25 FVLAYAGLGWVAEAMEIMILSFVGPTV--------KSEWNL--SSTE----ESLITTSVFAGLVVGAYAWGLVADNYGRR 90 (486)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--s~~~----~g~~~s~~~~~~~i~~~~~g~l~dr~G~r 90 (486)
.......++.+-.++....+++..+.+ .+++|. +.++ .+.+.+++.+|.++|++..|.++||+|||
T Consensus 11 ~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK 90 (485)
T KOG0569|consen 11 LAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRK 90 (485)
T ss_pred HHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 334444444455555555555544333 345563 3333 37788999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhc---CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHH
Q 011416 91 MGFLGEALVTAGAGLLSSF---SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAI 166 (486)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~---a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~ 166 (486)
..+.++.++..++.++..+ ++++.+++++|++.|+..|.. ....-++.|..|++.||....+.+.+..+|.+++..
T Consensus 91 ~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~ 170 (485)
T KOG0569|consen 91 NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQV 170 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888776665 478999999999999999998 666679999999999999999999999999999977
Q ss_pred HHHH--HhcCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhh-cCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCC
Q 011416 167 GAWI--IMPRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCL-KGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPT 243 (486)
Q Consensus 167 l~~~--l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (486)
++.. +.+...|++.+.+..+++++.++...++||+|+|+.. +++.+++++.++..+..++.+.+.++..++.+.+..
T Consensus 171 ~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~ 250 (485)
T KOG0569|consen 171 LGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEEL 250 (485)
T ss_pred HccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhcc
Confidence 7653 3355579999999999999999999999999999987 788999999998887655443332222221111111
Q ss_pred CCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHH-HHHHHHHHHH-HHHHHHHHHHHHhhhccccccCCCCcc
Q 011416 244 GERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLART-TILLWLLLFG-NSFAYYAVVLLISELSSLDTRCRSPLM 321 (486)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (486)
+ +....+++++++++..|. ..+.+...++ .....+....|...+.
T Consensus 251 ~----------------------~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~----------- 297 (485)
T KOG0569|consen 251 E----------------------KKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIF----------- 297 (485)
T ss_pred c----------------------cccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHH-----------
Confidence 1 112226777776644443 3333333332 2222333333334333
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh---hch---hHHH---HHHHHHH
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT---YQS---NILT---TGLLFGA 392 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~---~~~~~~~ 392 (486)
...|++..++.......++..++.++++.++.||.|||++++.+..++.+..+++.. ..+ .|.. +...++.
T Consensus 298 ~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~ 377 (485)
T KOG0569|consen 298 KTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLF 377 (485)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 235789999999999999999999999999999999999999999998888777654 111 1221 2222222
Q ss_pred H-HhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 393 R-MCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 393 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
. .+..+..|+.+.+.+|++|++.|++++++...++++..++....+..+.+..|. ..|+++.+.+++..++.+...||
T Consensus 378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 378 IISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred HHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcc
Confidence 2 333455789999999999999999999999999999999999999999999988 78899999999999999999999
Q ss_pred ccCCCccccccc
Q 011416 472 TKGQELSDTVDF 483 (486)
Q Consensus 472 ~~~~~~~~~~~~ 483 (486)
||+|+..|..++
T Consensus 457 Tkgr~~~eI~~~ 468 (485)
T KOG0569|consen 457 TKGRTPYEIIEE 468 (485)
T ss_pred cCCCCHHHHHHH
Confidence 999988776554
No 14
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=6e-39 Score=314.00 Aligned_cols=423 Identities=21% Similarity=0.252 Sum_probs=299.5
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhhhhcCCC--------cchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVKSEWNLS--------STEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
..++.++.+...++...+++..|.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+++..+.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~ 109 (481)
T TIGR00879 30 SLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIAL 109 (481)
T ss_pred HHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHH
Confidence 33444455667778888889999998888877 8999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcC---CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHH---HHH
Q 011416 99 VTAGAGLLSSFS---PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGA---WII 171 (486)
Q Consensus 99 ~~~~~~~~~~~a---~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~---~~l 171 (486)
+.+++.+++.++ .+++.+++.|+++|++.+.. +...+++.|++|+++|++++++.+.+.++|..+++.++ ...
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 189 (481)
T TIGR00879 110 LFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSL 189 (481)
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999888554 45668999999999999988 67778999999999999999999999999999999999 666
Q ss_pred hcCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccc
Q 011416 172 MPRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPEL 251 (486)
Q Consensus 172 ~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (486)
.+..+||+.|++.++..++..+..+++||+|++...+++.++.++..++....+. +......... .
T Consensus 190 ~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----------~ 255 (481)
T TIGR00879 190 NNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSG---EDKELLDELE-----------L 255 (481)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCC---CcHHHHHHHH-----------H
Confidence 6778999999997777666667777889998776555554443333322211110 0000000000 0
Q ss_pred hhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchh
Q 011416 252 VHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL 331 (486)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (486)
. ..... .+.+. ...........+++...+.++...+..+...........+.+.+. ++.|.+....
T Consensus 256 ~-~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~~~~ 321 (481)
T TIGR00879 256 I-DIKRS-IEKRS-VQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF-----------ENAGVSTDHA 321 (481)
T ss_pred H-HHHHH-HHHhh-ccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH-----------HHcCCCchHH
Confidence 0 00000 00000 001111222222221222233333333333333333344444333 3456777788
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-----hch-----hHHHH-HHHHHHHHhhhhhh
Q 011416 332 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-----YQS-----NILTT-GLLFGARMCVMGAF 400 (486)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~-~~~~~~~~~~~~~~ 400 (486)
+.......++.+++.++.+++.||++||+.+..+.++.+++++.+.. ..+ ..... ...++.+....+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (481)
T TIGR00879 322 FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWG 401 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHcccc
Confidence 88888999999999999999999999999998888777777666552 110 22222 22222223333344
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCCCc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQEL 477 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (486)
+....+..|.+|++.|+++.|+.+...+++++++|.+.+.+.++.++...|++.++++++++++.+.+.+|+|+++.
T Consensus 402 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 402 PVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred CeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCCh
Confidence 66777889999999999999999999999999999999999999899989999999988888888777777776554
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.1e-38 Score=306.45 Aligned_cols=374 Identities=18% Similarity=0.205 Sum_probs=277.8
Q ss_pred CchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 011416 20 GKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALV 99 (486)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~ 99 (486)
+++++..+..+++.++..+++.....+..|.+.+++|+|+.+.+++.+++.+++.+++++.|+++||+|||+++.++.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 45677778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Q 011416 100 TAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 100 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
.+++.++++++++++.++++|+++|++.+.. +....++.|++|+++|+++.++...+.++|.++++.+.+.+.+..+||
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 9999999999999999999999999999887 777789999999999999999999999999999999999998989999
Q ss_pred HHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccC
Q 011416 179 WLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSN 258 (486)
Q Consensus 179 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (486)
+.|++..+..++........||++++...+. .. +.++
T Consensus 173 ~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~------------~~-~~~~------------------------------ 209 (426)
T PRK12307 173 AAFFVGLLPVLLVIYIRARAPESKEWEEAKL------------SG-KGKH------------------------------ 209 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCChHHHHhhh------------hc-cccc------------------------------
Confidence 9998855443333333323344432211000 00 0000
Q ss_pred CCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHH
Q 011416 259 GGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFIT 338 (486)
Q Consensus 259 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (486)
++...+.....++++++++..+.........+......+....+.+.+. .+.|.++...+......
T Consensus 210 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~ 275 (426)
T PRK12307 210 ---SQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYL-----------AGEGFDTGVVSNLMTAA 275 (426)
T ss_pred ---cccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHH
Confidence 0000000011455566655544433333333333333333444555443 23467778888888888
Q ss_pred HhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHH--HhhhhhhhhHhhhccccccccch
Q 011416 339 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGAR--MCVMGAFTVSLIYAAEIYPTSVR 416 (486)
Q Consensus 339 ~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 416 (486)
.++.++++++.|++.||++||+.+..+.++.++..+.+.............++.+ +...+..+..+.++.|.+|++.|
T Consensus 276 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 355 (426)
T PRK12307 276 AFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVR 355 (426)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHH
Confidence 9999999999999999999999988887776665544433222111112222222 22233445667788999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchH
Q 011416 417 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTA 450 (486)
Q Consensus 417 ~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~ 450 (486)
++++|+.+...++++.++|.+.|++.+..|....
T Consensus 356 g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 356 GLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred hhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 9999999999999999999999999998886543
No 16
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.4e-38 Score=299.86 Aligned_cols=372 Identities=13% Similarity=0.065 Sum_probs=281.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH
Q 011416 22 YQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTA 101 (486)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~ 101 (486)
++|..+..+.++.+..........+.+|.+.+++|.|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34554555555445444444456677899999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Q 011416 102 GAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWL 180 (486)
Q Consensus 102 ~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~ 180 (486)
++++++++++|++.+++.|+++|++.+.. +...+++.|++|+++|++++|+...+.++|.+++|++++.+.+..|||+.
T Consensus 86 ~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 165 (390)
T PRK03545 86 ASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTT 165 (390)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHH
Confidence 99999999999999999999999999877 67778999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCC
Q 011416 181 LGLSSIPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNG 259 (486)
Q Consensus 181 f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (486)
|++.+++.++..+. ...+||+|+. ++++ .
T Consensus 166 f~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~-~-------------------------------------------- 195 (390)
T PRK03545 166 FLAIGGGALITLLLLIKLLPLLPSE-----HSGS-L-------------------------------------------- 195 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCC-----Ccch-H--------------------------------------------
Confidence 99998887766443 4445654321 0000 0
Q ss_pred CCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHH
Q 011416 260 GNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITS 339 (486)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (486)
+..++.++++..+..... .+.....++....+.+.+. .+..|.+....+.......
T Consensus 196 -----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l----------~~~~g~s~~~~~~~~~~~~ 251 (390)
T PRK03545 196 -----------KSLPLLFRRPALVSLYLL---TVVVVTAHFTAYSYIEPFV----------QQVAGLSENFATLLLLLFG 251 (390)
T ss_pred -----------HHHHHHHhCcHHHHHHHH---HHHHHHHHHHHHHHHHHHH----------HHhcCCCccHHHHHHHHHH
Confidence 022233333332222221 1122222222222333222 1234788888899999999
Q ss_pred hhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-HhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhh
Q 011416 340 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLP-LVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRST 418 (486)
Q Consensus 340 i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (486)
++.++++++.+++.||+++|.... +..+..++... ....++.+......++.+++.....+.....+.+..| +.+++
T Consensus 252 ~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~ 329 (390)
T PRK03545 252 GAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDV 329 (390)
T ss_pred HHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHH
Confidence 999999999999999999886544 44434343333 3334455555666667777776666777777778776 57899
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 419 GAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 419 ~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
++|+.+...++|..+||.+.|.+.|+.|+...+...+++.+++.+..+...
T Consensus 330 ~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 330 AMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999998888888877776665
No 17
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=3e-38 Score=302.00 Aligned_cols=388 Identities=20% Similarity=0.281 Sum_probs=285.3
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
.++++|+.+..++++++..+++....++..|.+.+++|++..+.|++.+++.++..+++++.|.++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 011416 99 VTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD- 176 (486)
Q Consensus 99 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~- 176 (486)
+.+++.++++++++++.+++.|++.|++.+.. +...+++.|++|+++|+++.++.+.+.++|.++++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999888 7777899999999999999999999999999999999999887766
Q ss_pred -cHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhc
Q 011416 177 -WRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLL 255 (486)
Q Consensus 177 -w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (486)
||+.|++.+++.++..+....+||++++...+++.++..+..++..+ .+.. .+
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------~~--------- 219 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYG---GEHR--------------IA--------- 219 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhc---cchh--------------hh---------
Confidence 99999887766666666666778876543221111111111111000 0000 00
Q ss_pred ccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHH
Q 011416 256 SSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDE 335 (486)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (486)
...+......+... .+.+..+...................+.+.+. .++.+.+..+.+...
T Consensus 220 --------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~g~s~~~~~~~~ 280 (405)
T TIGR00891 220 --------NIVMTLAAAMVQSA-GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYL----------KADLGLSPHTVANIV 280 (405)
T ss_pred --------hhhhhhhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHH----------HHHhCCCHHHHHHHH
Confidence 00000000001100 11111111122222222222223333334332 123578888899999
Q ss_pred HHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-HhhhchhHHHHHHHHHHHHhhhhhhhhHhhhcccccccc
Q 011416 336 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLP-LVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 414 (486)
Q Consensus 336 ~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (486)
....++.+++.++.+++.||++||+.+..+.....+.... +....+.+...+..++.+++..+..+....++.|.+|++
T Consensus 281 ~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (405)
T TIGR00891 281 VFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTD 360 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcc
Confidence 9999999999999999999999999888777665333322 222334444444445556666667778888999999999
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHH
Q 011416 415 VRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAV 451 (486)
Q Consensus 415 ~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~ 451 (486)
.|++++|+.+.+.+++..++|.+.|.+.|..| +...+
T Consensus 361 ~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~ 398 (405)
T TIGR00891 361 QRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTAL 398 (405)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhH
Confidence 99999999999999999999999999999988 54433
No 18
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.8e-37 Score=297.19 Aligned_cols=377 Identities=18% Similarity=0.214 Sum_probs=263.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcC---CCcchhHHHHH---HHHHHHHHHHHHHhhhhhhhcchHHHH
Q 011416 21 KYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWN---LSSTEESLITT---SVFAGLVVGAYAWGLVADNYGRRMGFL 94 (486)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~g~~~s---~~~~~~~i~~~~~g~l~dr~G~r~~~~ 94 (486)
+++++.+...+++++++++|+..++...|.+.++++ .+..+.+...+ ..+++..++++++|+++||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 445666777788899999999999999999999985 45555444444 445555599999999999999999999
Q ss_pred HHHHHHHHhhhhhhcCCCHH--------HHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHH
Q 011416 95 GEALVTAGAGLLSSFSPNYI--------TLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEA 165 (486)
Q Consensus 95 ~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~ 165 (486)
.+.++++++++++++++|+. .+++.|+++|++.|.. +...+++.|++|+++|+++.++.+.+...|.++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999875 5889999999999988 77889999999999999999999998888888888
Q ss_pred HHHHHHh--------cCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhc
Q 011416 166 IGAWIIM--------PRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVAR 237 (486)
Q Consensus 166 ~l~~~l~--------~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (486)
.+...+. +.+|||.+|++.++++++...+...+||+|++..+ .. +.
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~------~~---------~~----------- 231 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR------AL---------KE----------- 231 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh------hh---------cc-----------
Confidence 7765543 25799999999888777766555566776542100 00 00
Q ss_pred cccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCC
Q 011416 238 RSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCR 317 (486)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (486)
..+++++++++.. ........+.....+|....+.|.+..
T Consensus 232 --------------------------------~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~lp~~l~------ 271 (432)
T PRK10406 232 --------------------------------AGSLKGLWRNRRA--FIMVLGFTAAGSLCFYTFTTYMQKYLV------ 271 (432)
T ss_pred --------------------------------cccHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 0034445543322 112222222334556666677776541
Q ss_pred CCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh--h--hchhHHHHHHHHHHH
Q 011416 318 SPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV--T--YQSNILTTGLLFGAR 393 (486)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~ 393 (486)
+..|.+..+.+.......+...++.++.|+++||++||+.+.+...+.++....+. . ..+.........+..
T Consensus 272 ----~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (432)
T PRK10406 272 ----NTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCAL 347 (432)
T ss_pred ----HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 23567777888888887888888899999999999999887766554433332221 1 112222222222222
Q ss_pred HhhhhhhhhHhhhccccccccchhhHhHHHHHHHHH-HHHHHHHHHHHHHHhhccch-HHHHHHHHHHHHHHHHhcc
Q 011416 394 MCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRI-GGMVCPLVAVALVANCHQMT-AVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~i~g~l~~~~g~~~-~~~~~~~~~~~~~~~~~~~ 468 (486)
+..+...+..+.+.+|.+|++.|++++|+.+..+++ .+...|.+.+.+ +..|.+. .++..++..+++.+..++.
T Consensus 348 ~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 348 LIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 333334456778889999999999999999988774 355578877754 5556443 4444555555555555543
No 19
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=4.3e-38 Score=292.37 Aligned_cols=355 Identities=15% Similarity=0.083 Sum_probs=262.8
Q ss_pred HHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHH
Q 011416 37 EAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITL 116 (486)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l 116 (486)
+......+++.+|.+.+|+|+|..+.|++.+++++++.+++++.|+++||+|||+++..+......+......++|++.+
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 45667788999999999999999999999999999999999999999999999988776655555544333444799999
Q ss_pred HHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHH-HHHh
Q 011416 117 ITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFL 195 (486)
Q Consensus 117 ~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~-~~~~ 195 (486)
++.|+++|++.+...+....+.|++|+++|++++++.+.+..+|.+++++++..+.+..|||+.|++.++++++. ++.+
T Consensus 83 ~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 83 LACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999998666566667899999999999999999999999999999999999999999999988887765 4456
Q ss_pred hccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHh
Q 011416 196 GFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLM 275 (486)
Q Consensus 196 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (486)
+++||+|++..+ +.+ .++. ...+++
T Consensus 163 ~~lp~~p~~~~~--~~~-~~~~----------------------------------------------------~~~~~~ 187 (368)
T TIGR00903 163 AALPALPFQAAE--GFG-FKDA----------------------------------------------------VKEFGA 187 (368)
T ss_pred HHcCCCCCCCCC--Ccc-hHHH----------------------------------------------------HHHHHH
Confidence 678988754210 000 0000 003445
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH
Q 011416 276 LFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT 355 (486)
Q Consensus 276 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr 355 (486)
+++++. ++.....+++....++++..|.|.+. ++.+++.. .+.......+.+.++ .+++.||
T Consensus 188 ll~~~~---~~~~~~~~~~~~~~~~~~~~wlp~~L-----------~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~ 249 (368)
T TIGR00903 188 LAGRKD---LWIIGAILGFGVALFDNLAIWLEAAL-----------RPAGLEDI-AGDAVALAILAGLIG---VAVIPDR 249 (368)
T ss_pred HHcChh---HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHCCCChH-HHHHHHHHHHHHHHH---HHHhhHH
Confidence 555533 45555666777777888888888776 23355543 455555555544444 5777777
Q ss_pred hch---hHHHH-HHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHH
Q 011416 356 AGR---KLSIT-IMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGG 431 (486)
Q Consensus 356 ~g~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 431 (486)
..| |+... ....+.++....+....+.........+.+++....++..+++.+|.+|++.|+++.|+.+..+++++
T Consensus 250 ~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~ 329 (368)
T TIGR00903 250 VARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAIS 329 (368)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHH
Confidence 654 33322 23333444444444333444444555556677777778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHh
Q 011416 432 MVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 432 ~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 466 (486)
..+|.+.+.+.. +....|..+++..+++++..+
T Consensus 330 ~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 330 VALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 999999988774 666677888877777777664
No 20
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=3.2e-37 Score=291.49 Aligned_cols=377 Identities=14% Similarity=0.098 Sum_probs=279.9
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHH
Q 011416 23 QCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAG 102 (486)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~ 102 (486)
.|.....++++.+.... ....++..|.+++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..+..++++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 34444444444444333 36778999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHH
Q 011416 103 AGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-DWRWL 180 (486)
Q Consensus 103 ~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-~w~~~ 180 (486)
+.+++++++|++.+++.|+++|++.+.. +....++.+++| ++|+++++++..+..+|..+++.+++.+.++. +||..
T Consensus 87 ~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~ 165 (393)
T PRK09705 87 GALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQT 165 (393)
T ss_pred HHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 9999999999999999999999999987 566678888886 88999999999999999999999999988875 89998
Q ss_pred HHHhHHHHHHHHHHhhccCC-CchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCC
Q 011416 181 LGLSSIPSFILLAFLGFQPE-SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNG 259 (486)
Q Consensus 181 f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (486)
+.+.++..++..+.++...+ .|+ + ++ ++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~------~-~~------------~~-------------------------------- 194 (393)
T PRK09705 166 LAWWALPAVVALFAWWWQSAREVA------S-SH------------KT-------------------------------- 194 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCc------c-cc------------CC--------------------------------
Confidence 87766655444333322211 110 0 00 00
Q ss_pred CCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHH
Q 011416 260 GNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITS 339 (486)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (486)
+ . ..++.++++ ..+......+.....++....+.+.+. .++|.+..+++......+
T Consensus 195 ---~---~----~~~~~l~~~---~~~~l~~~~~~~~~~~~~~~~~lp~~l-----------~~~g~s~~~ag~~~~~~~ 250 (393)
T PRK09705 195 ---T---T----TPVRVVFTP---RAWTLGVYFGLINGGYASLIAWLPAFY-----------IEIGASAQYSGSLLALMT 250 (393)
T ss_pred ---C---c----CCcccccCH---hHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHcCCChhhhhHHHHHHH
Confidence 0 0 000111111 122233333344455566666666554 235788899999999999
Q ss_pred hhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhcccccc-ccchhh
Q 011416 340 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYP-TSVRST 418 (486)
Q Consensus 340 i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 418 (486)
++.++++++.+++.||++||+....+..+.+++.+.+...++... ....++.+++.+...+.......+..+ ++.+++
T Consensus 251 i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~ 329 (393)
T PRK09705 251 LGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLP-VLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGK 329 (393)
T ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHH-HHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHH
Confidence 999999999999999999999888887777776665443222111 122344567777777777666667764 578899
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHhcccccccCCCc
Q 011416 419 GAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIPFETKGQEL 477 (486)
Q Consensus 419 ~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (486)
.+|+.+...++++.++|.+.|++.|..| +...+.+..+++++..+..+.+.+|++.+.+
T Consensus 330 ~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 330 LVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 9999999999999999999999999987 4555666666666666666777777776654
No 21
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.5e-36 Score=290.75 Aligned_cols=382 Identities=16% Similarity=0.157 Sum_probs=269.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhchhch-hhhhc--CCCcchhHHHH-----HHHHHHHHHHHHHHhhhhhhhcchHHH
Q 011416 22 YQCFVLAYAGLGWVAEAMEIMILSFVGPT-VKSEW--NLSSTEESLIT-----TSVFAGLVVGAYAWGLVADNYGRRMGF 93 (486)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~g~~~-----s~~~~~~~i~~~~~g~l~dr~G~r~~~ 93 (486)
++++.+...+++++++++|...++.+.|. +.+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 44567777888999999999999988875 45555 66665 46554 355667889999999999999999999
Q ss_pred HHHHHHHHHhhhhhhcCCCHH--------HHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHH
Q 011416 94 LGEALVTAGAGLLSSFSPNYI--------TLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSE 164 (486)
Q Consensus 94 ~~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~ 164 (486)
..+.++++++++++++++|++ .+++.|+++|++.|.. +....++.|++|+++|++..+..+.+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 5888999999999998 7777899999999999999999999999999998
Q ss_pred HHHHHHHh--------cCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhh
Q 011416 165 AIGAWIIM--------PRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVA 236 (486)
Q Consensus 165 ~~l~~~l~--------~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (486)
..+...+. +.+|||.+|++.+++.++...+....||+|++...+++.++.+
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~--------------------- 236 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAK--------------------- 236 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccccc---------------------
Confidence 87776654 3579999999988776655555556677765421110000000
Q ss_pred ccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC
Q 011416 237 RRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRC 316 (486)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (486)
.+ ....+.+++++. .........++..+.+|....+.+.+.+
T Consensus 237 -----------------------------~~--~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~y~~----- 278 (438)
T PRK09952 237 -----------------------------KR--IPVIEALLRHPG--AFLKIIALRLCELLTMYIVTAFALNYST----- 278 (438)
T ss_pred -----------------------------cc--CCHHHHHHHchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 00 001122222221 1222222333444455555556554431
Q ss_pred CCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh---h-chhHHHHHHHHHH
Q 011416 317 RSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT---Y-QSNILTTGLLFGA 392 (486)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~ 392 (486)
+..|.+...........++..+++.++.|+++||++||+.+..+.++.+++.+.+.. . ++.+......++.
T Consensus 279 -----~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 353 (438)
T PRK09952 279 -----QNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLA 353 (438)
T ss_pred -----HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 234566655445555667778888999999999999999888776665544332222 1 1223333344455
Q ss_pred HHhhhhhhhhHhhhccccccccchhhHhHHHHHHHH-HHHHHHHHHHHHHHHhhc--cchHHHHHHHHHHHHHHHHhcc
Q 011416 393 RMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR-IGGMVCPLVAVALVANCH--QMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~~~~i~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
+++.+...+..+++..|.+|++.|+++.|+.+..+. +++.++|.+.+++.+..+ +...+...+++.+++.+..+..
T Consensus 354 ~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 354 NIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 666677778888999999999999999999776654 899999999999998653 4555666666666666555543
No 22
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.5e-37 Score=295.54 Aligned_cols=386 Identities=18% Similarity=0.054 Sum_probs=296.5
Q ss_pred HHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhh----
Q 011416 33 GWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSS---- 108 (486)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~---- 108 (486)
..++..+......+..|.+.++++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 3455556666777888999999999999999999999999999999999999999999999988887777665543
Q ss_pred -cCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHH
Q 011416 109 -FSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSI 186 (486)
Q Consensus 109 -~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~ 186 (486)
..++++.+++.|++.|++.+.. ++..+++.|+.|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 2578899999999999998877 66778899999999999999999999999999999999999888899999998887
Q ss_pred HHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccC
Q 011416 187 PSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEG 266 (486)
Q Consensus 187 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (486)
..++..+..+.+|++++.. +++.+. .+ +.
T Consensus 185 ~~~~~~~~~~~l~~~~~~~--~~~~~~-~~---~~--------------------------------------------- 213 (417)
T PRK10489 185 GTFITLLPLLRLPALPPPP--QPREHP-LR---SL--------------------------------------------- 213 (417)
T ss_pred HHHHHHHHHHhCCCCCCCC--cccccc-hH---HH---------------------------------------------
Confidence 7776666666677654311 000000 00 00
Q ss_pred CCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHH
Q 011416 267 KSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGL 346 (486)
Q Consensus 267 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 346 (486)
...++.+++++..+.......... . ......+.|.+. .+..|.++...+.......++.+++.
T Consensus 214 ---~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~p~~~----------~~~~g~~~~~~g~~~~~~~~g~~ig~ 276 (417)
T PRK10489 214 ---LAGFRFLLASPVVGGIALLGGLLT---M-ASAVRVLYPALA----------DEVWQMGAAQIGLLYAAVPLGAALGA 276 (417)
T ss_pred ---HHHHHHHHcChHHHHHHHHHHHHH---H-HHhHHHhhHHHH----------HhccCCChhHhHHHHHHHHHHHHHHH
Confidence 002334444444333322222111 1 122333444333 12357888888999999999999999
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHH
Q 011416 347 LLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAM 426 (486)
Q Consensus 347 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 426 (486)
++.+++.||.++++.+..+..+.+++.+.+...++.+...+..++.+++.+...+...+++.|..|++.||+++|+.+..
T Consensus 277 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 356 (417)
T PRK10489 277 LTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQ 356 (417)
T ss_pred HHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 99999999988777777777777777766666666555566666777777766777788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCCCccccccccCC
Q 011416 427 GRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVDFTSD 486 (486)
Q Consensus 427 ~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (486)
.++|..++|.+.|++.+..|+...+...+++.++..++.....++.|+++.+|.++|.+|
T Consensus 357 ~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (417)
T PRK10489 357 NVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDASD 416 (417)
T ss_pred HhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 999999999999999999998888888888877777777777778888888888777665
No 23
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.8e-36 Score=289.09 Aligned_cols=388 Identities=25% Similarity=0.364 Sum_probs=293.7
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH
Q 011416 16 HVGFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLG 95 (486)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~ 95 (486)
+.+.++++|..+....+.++..+.+....++..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 87 (398)
T TIGR00895 8 KQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLW 87 (398)
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHH
Confidence 34455677777777778888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 011416 96 EALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR 174 (486)
Q Consensus 96 ~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~ 174 (486)
+.++.+++.++..++++++.+++.|++.|++.+.. +...+++.|++|+++|++++++...+..+|..+++.+++.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 88 SILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999988 77788999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchh
Q 011416 175 LDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVH 253 (486)
Q Consensus 175 ~~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (486)
.+||..|++.++..++. .+...++||++++...+ +.++..+..++.......+.+ .+.+
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~---------- 227 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ---------SALP---------- 227 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc---------cccc----------
Confidence 99999999886555554 45566778887654333 222222222222111100000 0000
Q ss_pred hcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHH
Q 011416 254 LLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYI 333 (486)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (486)
++..+.+......+.+++++..+.....+...+.....++....+.|.+. ++.+.++.+.+.
T Consensus 228 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~~~~~~ 289 (398)
T TIGR00895 228 -------EQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM-----------VELGFSLSLAAT 289 (398)
T ss_pred -------ccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHcCCCHHHHHH
Confidence 00000001111334455555555555555555555555666666666433 345788888899
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccc
Q 011416 334 DEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 413 (486)
Q Consensus 334 ~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (486)
......++.+++.++.+++.||+++|+.............++.....+.+......++.+++.+...+...++..|.+|+
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 369 (398)
T TIGR00895 290 GGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT 369 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH
Confidence 99999999999999999999999998544433333333333332244555666777788888888999999999999999
Q ss_pred cchhhHhHHHHHHHHHHHHHHHHHHHHH
Q 011416 414 SVRSTGAGAANAMGRIGGMVCPLVAVAL 441 (486)
Q Consensus 414 ~~~~~~~g~~~~~~~~g~~~~~~i~g~l 441 (486)
+.|+++.|+.+.+..+|..++|.+.|++
T Consensus 370 ~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 370 AIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999999999999875
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.3e-36 Score=292.81 Aligned_cols=399 Identities=13% Similarity=0.152 Sum_probs=274.9
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
.++++|.++...++.....+.++..++...|.+.++ |+|..+.|++.+++.+++.+++++.|+++||+|||++++.+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~ 101 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLI 101 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHH
Confidence 445667777777777778888888888889999988 9999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcC----CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHH-HHHHHHHHHh
Q 011416 99 VTAGAGLLSSFS----PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSV-SEAIGAWIIM 172 (486)
Q Consensus 99 ~~~~~~~~~~~a----~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-i~~~l~~~l~ 172 (486)
+.+++.++++++ .+++.+++.|++.|++.+.. +.....+.|++|+++|++++++.+.+.++|.. .+++++..+.
T Consensus 102 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 102 LAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred HHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999888775 37888999999999999887 66667888999999999999999999999874 4555444443
Q ss_pred cCCCcHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccc
Q 011416 173 PRLDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPEL 251 (486)
Q Consensus 173 ~~~~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (486)
...+||+.|++.+++.++. ++..+++||+|+....+++ ++.++ + . +. +.++
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~---~----~----~~---------~~~~------- 233 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPI-EEYKN---D----Y----PD---------DYNE------- 233 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCCh-hhhhh---c----c----cc---------cccc-------
Confidence 4459999999988877665 4556667887653111110 00000 0 0 00 0000
Q ss_pred hhhcccCCCCCcccCCCchhh-hHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCch
Q 011416 252 VHLLSSNGGNKTTEGKSGLSL-FLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDAN 330 (486)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (486)
+ ++ ++...... .+.+++++ .++...+..+......+....+.|.+.+ +..|++..+
T Consensus 234 --------~-~~-~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~P~~l~----------~~~g~s~~~ 290 (452)
T PRK11273 234 --------K-HE-QELTAKQIFMQYVLPNK---LLWYIAIANVFVYLLRYGILDWSPTYLK----------EVKHFALDK 290 (452)
T ss_pred --------c-cC-CCccHHHHHHHHHHcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhcCCCHHH
Confidence 0 00 00000001 11233332 2333334444444455566667776552 234677788
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHh--chhHHH-HHHHHHHHHHHHHHhh--hchhHHHHHHHHHHHHhhhhhhhhHhh
Q 011416 331 LYIDEFITSLAEIPGLLLAAILVDTA--GRKLSI-TIMFTLSCLFLLPLVT--YQSNILTTGLLFGARMCVMGAFTVSLI 405 (486)
Q Consensus 331 ~~~~~~~~~i~~~~~~~~~g~l~dr~--g~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (486)
++.......++.+++.++.|+++||+ +||... .....+..++.+.+.. ..+.+...+..+..+.+..+.......
T Consensus 291 ~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 370 (452)
T PRK11273 291 SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGL 370 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHH
Confidence 88888888899999999999999998 455432 2222222333322222 222333333334444433333333445
Q ss_pred hccccccccchhhHhHHHHHHHHHHHHH-HHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 406 YAAEIYPTSVRSTGAGAANAMGRIGGMV-CPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 406 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
+..|.+|++.+|+++|+.+...++|+.+ +|.+.|.+.|+.|+...|.+.+++++++++....+.
T Consensus 371 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 371 HALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 6779999999999999999999988765 799999999999999999888888887776666554
No 25
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=5.5e-36 Score=287.15 Aligned_cols=358 Identities=17% Similarity=0.229 Sum_probs=252.0
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHH-HHH-----HHHHHHHHHHHhhhhhhhcchHHHHHH
Q 011416 23 QCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLIT-TSV-----FAGLVVGAYAWGLVADNYGRRMGFLGE 96 (486)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~-s~~-----~~~~~i~~~~~g~l~dr~G~r~~~~~~ 96 (486)
|++....++++.++.++|+..+++..|.+.+|++.++.+.+.+. +.. .++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 44567788899999999999999999999999999888875443 332 222347889999999999999999999
Q ss_pred HHHHHHhhhhhhcCCCHHH--------HHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011416 97 ALVTAGAGLLSSFSPNYIT--------LITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIG 167 (486)
Q Consensus 97 ~~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l 167 (486)
.++++++++++++++|++. +++.|+++|++.+.. +....++.|++|+++|++++++...+.++|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874 688999999999988 6677899999999999999999999998988888888
Q ss_pred HHHHh--------cCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccc
Q 011416 168 AWIIM--------PRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRS 239 (486)
Q Consensus 168 ~~~l~--------~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (486)
++.+. +.+|||++|++..+...+........||++++...+ .+.+
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~----------------~~~~----------- 225 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK----------------HRPS----------- 225 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh----------------hccc-----------
Confidence 77753 568999999875443322222222223321100000 0000
Q ss_pred cCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 011416 240 TLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSP 319 (486)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (486)
. ...++.+.+++ +.........+.....++....+.|.+.+
T Consensus 226 --------------------------~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~-------- 266 (434)
T PRK15075 226 --------------------------M---REIFRSLAANW--RIVLAGMLMVAMTTVSFYLITVYTPTFGK-------- 266 (434)
T ss_pred --------------------------c---ccHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 0 00122222111 11222222333344455666667776542
Q ss_pred ccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHH-HHh-h--hchhHHHHHHHHHHHHh
Q 011416 320 LMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLL-PLV-T--YQSNILTTGLLFGARMC 395 (486)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~ 395 (486)
+..|.+..+.++......++.+++.++.|+++||++||+....+..+.++... .+. . .++.........+.+++
T Consensus 267 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (434)
T PRK15075 267 --TVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFL 344 (434)
T ss_pred --HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 23478878888888888899999999999999999999988776554433221 111 1 12222222333444556
Q ss_pred hhhhhhhHhhhccccccccchhhHhHHHHHHHH-HHHHHHHHHHHHHHHhhccc
Q 011416 396 VMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR-IGGMVCPLVAVALVANCHQM 448 (486)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~~~~i~g~l~~~~g~~ 448 (486)
.+...+..+.+..|.+|++.|+++.|+.+.++. +++.++|.+.|++.|..|+.
T Consensus 345 ~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 345 YGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 666666677888999999999999999766665 46889999999999998853
No 26
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.8e-36 Score=287.09 Aligned_cols=375 Identities=13% Similarity=0.103 Sum_probs=290.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH
Q 011416 22 YQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTA 101 (486)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~ 101 (486)
.|++....+++.+++.+.+....++..|.+.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45566667778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcHH
Q 011416 102 GAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP-RLDWRW 179 (486)
Q Consensus 102 ~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~-~~~w~~ 179 (486)
++.+++++++|++.+++.|+++|++.+.. +...+++.|++|+++|+++++..+...++|..++|.+.+.+.. ..+||+
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 99999999999999999999999999877 6777889999999999999999999999999999998887654 579999
Q ss_pred HHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCC
Q 011416 180 LLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNG 259 (486)
Q Consensus 180 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (486)
.|.+.+++.++..+..++ .+.|+.. +++.+ + +
T Consensus 164 ~f~~~~~~~~~~~~~~~~-~~~p~~~--~~~~~-------------~-~------------------------------- 195 (394)
T PRK03699 164 VYACIGLVYVAIFILTLF-SEFPALG--KHAPK-------------A-D------------------------------- 195 (394)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCcccc--ccCcc-------------c-c-------------------------------
Confidence 999888777665444332 2222100 00000 0 0
Q ss_pred CCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHH
Q 011416 260 GNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITS 339 (486)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (486)
.+ ..+ ....+.++......++....++....+.|.+.+ +.+|.++.+.+.......
T Consensus 196 -~~---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~----------~~~g~s~~~~~~~~~~~~ 251 (394)
T PRK03699 196 -KP---------VAK----EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQ----------KKFGMSLEDAGNLVSNFW 251 (394)
T ss_pred -Cc---------ccc----ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHcCCChHHhhHHHHHHH
Confidence 00 000 000122333334444444555666667775542 345788889999999999
Q ss_pred hhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhH
Q 011416 340 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 419 (486)
Q Consensus 340 i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (486)
++..+++++.+++.||+++|+.+.....+.++...++...++.+......++.+++.+..++...+...+..|.+ ++..
T Consensus 252 ~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~ 330 (394)
T PRK03699 252 MAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKL 330 (394)
T ss_pred HHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHH
Confidence 999999999999999999999888777766666555555555555555666777777777888777777777644 6778
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 420 AGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 420 ~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.+......++|..++|.+.|++.|..|+...++..+++++++.+......
T Consensus 331 ~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 331 VNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999998888888877777765554443
No 27
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.9e-36 Score=296.73 Aligned_cols=416 Identities=18% Similarity=0.269 Sum_probs=281.4
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
.++.+|+.+..+++.+++..++....++..|.+.+++|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 14 LNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 34567788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 99 VTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 99 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
+.+++.+++++++|++.+++.|++.|++.+.. +...+++.|++|+++|++++++...+.++|..+++.+++.+.+..+|
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99999999999999999999999999998877 67778899999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhccc
Q 011416 178 RWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSS 257 (486)
Q Consensus 178 ~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (486)
|+.|++..+..++.++....+||++++...+++.++.++..+.... ...+. ........ ........
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~----------~~~~~~~~ 240 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYR-GEHRI--INILLTLA----------AAAALWFC 240 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhc-chhHH--HHHHHHHH----------HHHHHHHH
Confidence 9999876554444444455567665432211111110100000000 00000 00000000 00000000
Q ss_pred CCCCCcccCCCchh--------h---hHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCC
Q 011416 258 NGGNKTTEGKSGLS--------L---FLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHP 326 (486)
Q Consensus 258 ~~~~~~~~~~~~~~--------~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (486)
. . .......... . .....+.+.++.........+......+....+.|.+. .++.|.
T Consensus 241 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l----------~~~~g~ 308 (496)
T PRK03893 241 F-A-GNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYL----------KTDLGY 308 (496)
T ss_pred H-H-hhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHH----------HhhcCC
Confidence 0 0 0000000000 0 00000000001111111111111111122334445433 134578
Q ss_pred CCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--chhHHHHHHHHHHHHhhhhhhhhHh
Q 011416 327 QDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY--QSNILTTGLLFGARMCVMGAFTVSL 404 (486)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (486)
+..+++.......++.+++.++.|++.||+++|+.+..+..+..+..+.+... .+.+......++.++...+..+...
T Consensus 309 ~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (496)
T PRK03893 309 DPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLP 388 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhH
Confidence 88999999999999999999999999999999998887776666554433332 2222222333333333334456677
Q ss_pred hhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Q 011416 405 IYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIV 459 (486)
Q Consensus 405 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~ 459 (486)
.++.|.+|++.|++++|+.+....+|+.++|.+.|.+.|..|+...+...++.+.
T Consensus 389 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 389 KLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLT 443 (496)
T ss_pred HHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999988777655554443
No 28
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=3.7e-37 Score=291.52 Aligned_cols=365 Identities=14% Similarity=0.125 Sum_probs=273.6
Q ss_pred HHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhh
Q 011416 29 YAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSS 108 (486)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 108 (486)
...+...+........++..|.+.+++|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~ 86 (377)
T TIGR00890 7 VGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYA 86 (377)
T ss_pred HHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHH
Confidence 33444444445577888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHH
Q 011416 109 FSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIP 187 (486)
Q Consensus 109 ~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~ 187 (486)
+++|++.+++.|++.|++.+.. +.....+.+++| ++|+++.++...+.++|..+++++.+.+.+..+||+.|++.+++
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 87 IADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 9999999999999999999877 566677788886 67999999999999999988777777777888999999999888
Q ss_pred HHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccC
Q 011416 188 SFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEG 266 (486)
Q Consensus 188 ~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (486)
.++..+. +++++++|+.. .+++.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------------------------------------------------- 192 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQL-IKTNIEVS---------------------------------------------------- 192 (377)
T ss_pred HHHHHHHHHHheecCchhc-cccCcccc----------------------------------------------------
Confidence 8776544 44444433210 00000000
Q ss_pred CCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHH
Q 011416 267 KSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGL 346 (486)
Q Consensus 267 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 346 (486)
......++.++++..+.... ..+...........+.+.+. ++.+.+..+.+.......++.++++
T Consensus 193 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (377)
T TIGR00890 193 -VKDYTVWEMLRTPQFWVLYL---SFFLNAVSGLLLIGLYKPYG-----------QSLGLSDGFLVLAVSISSIFNGGGR 257 (377)
T ss_pred -hhhhhHHHHHcCccHHHHHH---HHHHHhHHHHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00002233343333222222 22222222222222222222 2346777778888899999999999
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch--hHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHH
Q 011416 347 LLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQS--NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAAN 424 (486)
Q Consensus 347 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 424 (486)
++.|++.||++||+.+..+..+.+++.+.+...++ .........+.+++.+...+....+..|.+|+++|+++.|+.+
T Consensus 258 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 337 (377)
T TIGR00890 258 PFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLY 337 (377)
T ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHH
Confidence 99999999999999998888888877766655432 2223334455666667677777888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHH
Q 011416 425 AMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSI 462 (486)
Q Consensus 425 ~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 462 (486)
....+|..++|.+.|.+.+..|+...+.+.+++.+++.
T Consensus 338 ~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 338 TAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999888888777766553
No 29
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=6.8e-36 Score=284.37 Aligned_cols=365 Identities=14% Similarity=0.033 Sum_probs=273.5
Q ss_pred HHHHHHHHHHHHHHhhHhhhhchhch-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHh
Q 011416 25 FVLAYAGLGWVAEAMEIMILSFVGPT-VKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGA 103 (486)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 103 (486)
+.+..+.+..++..++..+..+.+|. +.+++|.|..+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 34445667777888888888888887 67899999999999999999999999999999999999999999999988887
Q ss_pred hhhhhcC---C-----CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 011416 104 GLLSSFS---P-----NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR 174 (486)
Q Consensus 104 ~~~~~~a---~-----~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~ 174 (486)
.+++.++ + +++.+++.|+++|++.+.. +...+++.|++|+++|++++++...+..+|.++++.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 6665443 2 5678999999999999988 66778889999999999999999999999999999999999999
Q ss_pred CCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhh
Q 011416 175 LDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHL 254 (486)
Q Consensus 175 ~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (486)
.|||..+++.++..++..+.....|++++. +++++
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------------------------------ 209 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLARPRPAVPPV---KGERL------------------------------------------ 209 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCCCCC---Cccch------------------------------------------
Confidence 999999887666555443333222322110 00000
Q ss_pred cccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHH
Q 011416 255 LSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYID 334 (486)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (486)
++++.+++. ++... ......+.+.....+.+.+.. +.+. ...+..
T Consensus 210 -----------------~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~-----------~~~~--~~~~~~ 254 (399)
T PRK05122 210 -----------------PFRRVLGRV-WPYGM----GLALASIGFGTIATFITLYYA-----------ARGW--DGAALA 254 (399)
T ss_pred -----------------hHHHHHHHH-HHHHH----HHHHHHHHHHHHHHHHHHHHH-----------Hccc--ccchHH
Confidence 111111110 01111 111112222223333333221 1233 234555
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhcccccccc
Q 011416 335 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 414 (486)
Q Consensus 335 ~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (486)
.....++.+++.++.|++.||+++|+.+..+..+.+++.+.+...++.+...+..++.+++.+..++.......|..|++
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 334 (399)
T PRK05122 255 LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ 334 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH
Confidence 66778888999999999999999999988888887777777666666666666677788888888888777888899999
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 415 VRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 415 ~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.|++++|+.+...++|..++|.+.|.+.+..|+...+.+.+++.+++.+..+.+.
T Consensus 335 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 335 NRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998888888888887776666554
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.6e-36 Score=292.97 Aligned_cols=392 Identities=16% Similarity=0.104 Sum_probs=271.6
Q ss_pred hhcCCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHH
Q 011416 15 THVGFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFL 94 (486)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~ 94 (486)
+..+.++++++.+...+...+....+....++..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~ 105 (476)
T PLN00028 26 RLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSA 105 (476)
T ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 34445566677777777888888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh--
Q 011416 95 GEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM-- 172 (486)
Q Consensus 95 ~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~-- 172 (486)
.+.++++++.+++++++|++.+++.|++.|++.+...+...++.|++|+++|++++|+.....++|..+++.+...+.
T Consensus 106 ~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~ 185 (476)
T PLN00028 106 FLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL 185 (476)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998766445567889999999999999998877777777766554432
Q ss_pred --c-----CCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCC
Q 011416 173 --P-----RLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGE 245 (486)
Q Consensus 173 --~-----~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (486)
+ ..|||+.|++.+++.++..+..++++++++. ++.++.+ +...
T Consensus 186 ~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~----~~~~~~~-------~~~~------------------- 235 (476)
T PLN00028 186 IKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD----GNYRELK-------KSGT------------------- 235 (476)
T ss_pred HHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC----CchhhHH-------hcCc-------------------
Confidence 2 2589999999998887765555555433211 0000000 0000
Q ss_pred CCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCC
Q 011416 246 RAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHH 325 (486)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (486)
.++......+++.++.+. ++..++.++......+....+.+.+. .+..|
T Consensus 236 ------------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~l----------~~~~g 284 (476)
T PLN00028 236 ------------------MPKDSFSKVLRYGVTNYR---TWILALTYGYSFGVELTMDNIIAEYF----------YDRFG 284 (476)
T ss_pred ------------------cccccHHHHHHHHHcCch---hHHHHHHHHHHHHHHHHHHhHHHHHH----------HHhcC
Confidence 000000012233333322 23333333333333334444444433 13457
Q ss_pred CCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchh-------HHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhh
Q 011416 326 PQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK-------LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMG 398 (486)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (486)
.+..+++.......++.+++++++|+++||++|| ....+...+.++..+.+....+.+......++.+++.+.
T Consensus 285 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~ 364 (476)
T PLN00028 285 LSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQA 364 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999865 223333333333333333344444444445555666555
Q ss_pred hhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 399 AFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
..+..+++..+..| +.+|++.|+.+..+++|+.++|.+.+ ..+..++...|.+.+++.++++++.++..
T Consensus 365 ~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 365 ACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 66667777777654 67999999998887788888777654 11223477788888888877777666553
No 31
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.3e-35 Score=278.46 Aligned_cols=368 Identities=11% Similarity=0.058 Sum_probs=273.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 011416 21 KYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVT 100 (486)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~ 100 (486)
|..|..+..+..+.+..........+.+|.+.+++|+++++.|+..+++.++..+++++.|.++||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 34666655555555555555556666789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 011416 101 AGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRW 179 (486)
Q Consensus 101 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~ 179 (486)
+++.+++++++|++.+++.|+++|++.+.. +...+++.|++|+++|++++++...+.++|.+++|++++.+.+.+|||+
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 999999999999999999999999999988 7777889999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccC
Q 011416 180 LLGLSSIPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSN 258 (486)
Q Consensus 180 ~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (486)
.|++.++++++..+. ....||+|++ +++..+
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~-----~~~~~~------------------------------------------- 207 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGE-----PSHQKQ------------------------------------------- 207 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcc-----cccchh-------------------------------------------
Confidence 999988776665433 3345654321 000000
Q ss_pred CCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccccCCCCccccCCCCCchhHHHHHH
Q 011416 259 GGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLI-SELSSLDTRCRSPLMFSHHPQDANLYIDEFI 337 (486)
Q Consensus 259 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (486)
..+..++++..+..... .+......+....+. |.+. ++.|.++...+.....
T Consensus 208 -------------~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~-----------~~~g~s~~~~g~~~~~ 260 (394)
T PRK10213 208 -------------NTFRLLQRPGVMAGMIA---IFMSFAGQFAFFTYIRPVYM-----------NLAGFGVDGLTLVLLS 260 (394)
T ss_pred -------------HHHHHhcCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-----------HhcCCChhHHHHHHHH
Confidence 11223333332222222 222222222222232 3222 3457888888998999
Q ss_pred HHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchh
Q 011416 338 TSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRS 417 (486)
Q Consensus 338 ~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (486)
.+++.+++.++.+++.||.+++.......+..+..+++....++.+......++.|++.+...+...+.+.+..| ++++
T Consensus 261 ~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~ 339 (394)
T PRK10213 261 FGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAE 339 (394)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHH
Confidence 999999999999999999654444443333333334443444555666667777888888888888888888887 4467
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q 011416 418 TGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILS 464 (486)
Q Consensus 418 ~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 464 (486)
...++.....++|..+||.+.|++.|..|+...+...+.+.++..+.
T Consensus 340 ~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 340 KAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 77788888889999999999999999988877777766655544433
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.6e-36 Score=289.48 Aligned_cols=383 Identities=18% Similarity=0.217 Sum_probs=276.3
Q ss_pred HHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCH
Q 011416 34 WVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNY 113 (486)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~ 113 (486)
++..++++..++...|.+.+++|.+..+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++..++++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHH
Q 011416 114 ITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL 192 (486)
Q Consensus 114 ~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~ 192 (486)
+.+++.|++.|++.+.. +...+++.|++|+++|++++++.+...++|.++++.+++.+.+..+||+.|++.+++.++..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 99999999999999888 77788999999999999999999999999999999999999899999999999888777764
Q ss_pred HH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchh
Q 011416 193 AF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLS 271 (486)
Q Consensus 193 ~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (486)
+. .+..||+|+.. +...++.++...+ . ... +. +++++.+....
T Consensus 163 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~-~~~-----------------~~--------------~~~~~~~~~~~ 206 (399)
T TIGR00893 163 VLWLKFIPDPPQKA--KWLTEEEKYIVVG--G-LLA-----------------EQ--------------QGKGPSTPKKY 206 (399)
T ss_pred HHhhheecCCCCcc--ccCCHHHHhhcch--h-hcc-----------------cc--------------ccccccCCCcc
Confidence 44 44456654321 1111111000000 0 000 00 00000001111
Q ss_pred hhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHH
Q 011416 272 LFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAI 351 (486)
Q Consensus 272 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~ 351 (486)
..++.++++. ++......+...........+.+.+.+ +..+.++.+.+.......++.+++.++.|+
T Consensus 207 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (399)
T TIGR00893 207 QIKELLKDRR---VWGLALGQFLVNIGLGFFLTWFPTYLV----------QERGLSILEAGFMASLPGIVGFIGMILGGR 273 (399)
T ss_pred chHHHhcCHH---HHHHHHHHHHHHhHHHHHHHHHHHHHH----------HHhcccHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 3444444433 333333334444444444455554431 234677888889999999999999999999
Q ss_pred HHHHhchhH--HHHHHHH--H----HHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHH
Q 011416 352 LVDTAGRKL--SITIMFT--L----SCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAA 423 (486)
Q Consensus 352 l~dr~g~~~--~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 423 (486)
+.||++||+ ....... . ..+........++.+... .....+.+..+..+...++..|.+|++.|++++|+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (399)
T TIGR00893 274 LSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAAL-ALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLI 352 (399)
T ss_pred HHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHH-HHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHH
Confidence 999999985 1111111 1 111111111112233223 333333334447889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHh
Q 011416 424 NAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 424 ~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 466 (486)
+.+.++|+.++|.+.|.+.|..| +...+.+.+++.+++.+..+
T Consensus 353 ~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 353 NSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 77777777777776665554
No 33
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.5e-35 Score=288.17 Aligned_cols=393 Identities=15% Similarity=0.094 Sum_probs=285.9
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH
Q 011416 22 YQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTA 101 (486)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~ 101 (486)
++|..+..++++.++..+|..+++..+|.+.+++|.+.++.+|+.+.+.+++.++.+++|+++||+|||+++..+..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 35778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhcccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 011416 102 GAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFV-PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRW 179 (486)
Q Consensus 102 ~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~ 179 (486)
++++++++++|++.++++|+++|+|.+.. +.....+.+++ |+++|++++|+.....++|..+||.+++.+.++.+||+
T Consensus 83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~ 162 (495)
T PRK14995 83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGS 162 (495)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHH
Confidence 99999999999999999999999999887 66666676665 67999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHH------HHHHhc-CCCCCCchhhhccccCCCCCCCCccc
Q 011416 180 LLGLSSIPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALE------KIAQVN-KTKLPNGKLVARRSTLPTGERAPPEL 251 (486)
Q Consensus 180 ~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (486)
.|++...+.++.. +..+++||+++.. +++.+....... ...... ..+..... ....
T Consensus 163 ~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~--------------~~~~ 226 (495)
T PRK14995 163 VFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSL--------------WVTS 226 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCch--------------HHHH
Confidence 9999877766653 4455667765321 111111111000 000000 00000000 0000
Q ss_pred hhhccc-----CCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCC
Q 011416 252 VHLLSS-----NGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHP 326 (486)
Q Consensus 252 ~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (486)
...... .....+.+.+.+..+++ +++++.... .....+.....+++...+.+.+.+ ..+|.
T Consensus 227 ~~~~~~~~~l~~f~~~e~~~~~p~~~~~-lf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lq----------~v~g~ 292 (495)
T PRK14995 227 LTLLTGALLLGLFIRTQLAASRPMIDMR-LFTHRIILS---GVVMAMTAMITLVGFELLMAQELQ----------FVHGL 292 (495)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcCHH-HhCCcccHH---HHHHHHHHHHHHHHHHHHHHHHHH----------HHcCC
Confidence 000000 00000001111222333 344433222 222222233334444444443331 23479
Q ss_pred CCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh---hchhHHHHHHHHHHHHhhhhhhhhH
Q 011416 327 QDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT---YQSNILTTGLLFGARMCVMGAFTVS 403 (486)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (486)
++.+++.......++..++.++.|++.||+|+|+.+..+.++.+++.+.+.. ..+.+......++.|++.+...+..
T Consensus 293 s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~ 372 (495)
T PRK14995 293 SPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLAS 372 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHH
Confidence 9999999999999999999999999999999999888888877776655543 2344445566777888888888888
Q ss_pred hhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 404 LIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVAN 444 (486)
Q Consensus 404 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~ 444 (486)
.....+..|+++++.+.++.+...++|+.+|+.+.|.+.++
T Consensus 373 ~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 373 TSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999998764
No 34
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=7.3e-36 Score=289.50 Aligned_cols=396 Identities=14% Similarity=0.149 Sum_probs=287.6
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhh----------------------hcCCCcchhHHHHHHHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKS----------------------EWNLSSTEESLITTSVFAGLVVG 76 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~g~~~s~~~~~~~i~ 76 (486)
..+.||.+..++++++.+++.++..++...+.+.+ |++++..+.|++.+++.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 56778899999999999999999999999988877 89999999999999999999999
Q ss_pred HHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcC--CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHH
Q 011416 77 AYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFS--PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIF 153 (486)
Q Consensus 77 ~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~ 153 (486)
+++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+.. +....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999998887543 67889999999999999998 77888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHhHHHHHHHHHHhh-ccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCC
Q 011416 154 SSFWTIGSVSEAIGAWIIMPR-LDWRWLLGLSSIPSFILLAFLG-FQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPN 231 (486)
Q Consensus 154 ~~~~~~G~~i~~~l~~~l~~~-~~w~~~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (486)
..+..+|.++++++++.+.+. .+||..|++.++++++..+.++ +.+|+|+... +..++.++..+ +....+
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~i~---~~~~~~--- 244 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP--CISKFEKKYIN---SSLQGQ--- 244 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC--CCCHHHHHHHH---hhcccc---
Confidence 999999999999999999888 4999999999988877655544 4556664211 11111111110 000000
Q ss_pred chhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 011416 232 GKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSS 311 (486)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (486)
.++.+...+++++++++. ++......++....++....+.|.+.+
T Consensus 245 --------------------------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lp~~l~ 289 (465)
T TIGR00894 245 --------------------------------KGSTRQSLPIKAIPKSLP---VWAIWFAIFGHFWLYTILPTYLPTFIS 289 (465)
T ss_pred --------------------------------cCCCCCCCCHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000114556665543 444455555566666666677776652
Q ss_pred ccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHH--------HHHHHHHH--HHHHHHHhh-hc
Q 011416 312 LDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLS--------ITIMFTLS--CLFLLPLVT-YQ 380 (486)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~--------~~~~~~~~--~~~~~~~~~-~~ 380 (486)
+..|.+..+.++......++.+++.+++|+++||+++|+. +..+.... ++..+.... ..
T Consensus 290 ----------~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (465)
T TIGR00894 290 ----------WVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSA 359 (465)
T ss_pred ----------HHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3457888899999999999999999999999999754321 11111111 111111111 22
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhh--c-cchHHHHHHHH
Q 011416 381 SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC--H-QMTAVVLLVVV 457 (486)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~--g-~~~~~~~~~~~ 457 (486)
+.......+.+.+.+.+...+.......|..|+ .+|.+.|+.+..+.+++.++|.+.|.+.+.. + +...|.+.+++
T Consensus 360 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~ 438 (465)
T TIGR00894 360 AFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFV 438 (465)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHH
Confidence 333333344444444444555555666677765 7999999999999999999999999887753 2 56677777777
Q ss_pred HHHHHHHHhcc
Q 011416 458 IVTSILSVMLI 468 (486)
Q Consensus 458 ~~~~~~~~~~~ 468 (486)
.+++.++....
T Consensus 439 ~~i~~i~~~~~ 449 (465)
T TIGR00894 439 NILCVIFYLIF 449 (465)
T ss_pred HHHHHHHeeee
Confidence 77776665544
No 35
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=5.1e-35 Score=277.55 Aligned_cols=363 Identities=17% Similarity=0.081 Sum_probs=265.8
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhch-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhh
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPT-VKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAG 104 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 104 (486)
.+..+.++.++.........+.+|. +.+++|.|..+.|++.+++.+++.++++++|+++||+|||+++..+.+...++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3444555566667777777788886 578999999999999999999999999999999999999999999988777665
Q ss_pred hhh---hc-----CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 011416 105 LLS---SF-----SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL 175 (486)
Q Consensus 105 ~~~---~~-----a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~ 175 (486)
+.+ +. .+|++.+++.|+++|++.+.. +...+++.|++|+++|++++++.+.+.++|..++|++++.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 432 22 357899999999999999877 666788899999999999999999999999999999999999999
Q ss_pred CcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhc
Q 011416 176 DWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLL 255 (486)
Q Consensus 176 ~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (486)
|||..+.+..+..++........||.++. +++++
T Consensus 176 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------------------------------- 209 (392)
T PRK12382 176 GFAALALTTMVLPLLAWAFNGTVRKVPAH---AGERP------------------------------------------- 209 (392)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccCCCCC---cccCc-------------------------------------------
Confidence 99988776555443333222222322110 00000
Q ss_pred ccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHH
Q 011416 256 SSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDE 335 (486)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (486)
+.++..+........ ..+ ....+.....+.+.+. ++.+.+ ..+...
T Consensus 210 ----------------~~~~~~~~~~~~~~~-~~l----~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~ 255 (392)
T PRK12382 210 ----------------SLWSVVGLIWKPGLG-LAL----QGVGFAVIGTFVSLYF-----------ASKGWA--MAGFTL 255 (392)
T ss_pred ----------------hHHHHHHHHHHhHHH-HHH----HHHHHhHHHHHHHHHH-----------HhcCCc--hhHHHH
Confidence 011111110001111 111 1112222222333222 112333 245556
Q ss_pred HHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccc
Q 011416 336 FITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 415 (486)
Q Consensus 336 ~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (486)
....++.++++++.|++.||+++|+.+..+..+.+++.+.+...++.+......++.+++.+...+.......|..|+++
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 335 (392)
T PRK12382 256 TAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV 335 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH
Confidence 66777888999999999999999999888888888777766665566556666677777777778888888889999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 416 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 416 ~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
|+++.|+.+...++|..++|.+.|.+.|+.|+...+...+++.+++.++.+..
T Consensus 336 ~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 336 RGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999998888887777766544
No 36
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=4.5e-35 Score=272.99 Aligned_cols=373 Identities=13% Similarity=0.070 Sum_probs=277.6
Q ss_pred CchHHHHHHHHHHHHHHHHhhHhhhhchhchhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 20 GKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKS-EWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
++-.++.+.+.+++.+..+..+..++++.+.+.+ ++|+|.+|.+++.+++.+++.++.++.|++.||+|+|+++.++.+
T Consensus 29 ~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~l 108 (462)
T PRK15034 29 KHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTA 108 (462)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 3445678888889999999999999999999876 899999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcC-----CCHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 011416 99 VTAGAGLLSSFS-----PNYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM- 172 (486)
Q Consensus 99 ~~~~~~~~~~~a-----~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~- 172 (486)
++++.+++.+++ +|++.+++.|++.|++.+..++....+++|+|+++||+++|+.....++|..+++++...+.
T Consensus 109 l~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~ 188 (462)
T PRK15034 109 ILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999987 89999999999999984444778889999999999999999998777788776666554432
Q ss_pred ----c-------------CCCcHHHHHHhHHHHHHHHHHhh-ccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchh
Q 011416 173 ----P-------------RLDWRWLLGLSSIPSFILLAFLG-FQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKL 234 (486)
Q Consensus 173 ----~-------------~~~w~~~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (486)
+ ..+||.+.++..++.++..+..+ +.++.|. .+.+.+
T Consensus 189 ~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~~---------------------- 243 (462)
T PRK15034 189 VPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASIA---------------------- 243 (462)
T ss_pred HHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCHH----------------------
Confidence 2 23478888787777766654433 3333221 000000
Q ss_pred hhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 011416 235 VARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDT 314 (486)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (486)
..+..+|++ ..+.....+++....+.++..+.|.+.+.
T Consensus 244 -------------------------------------~~~~vlk~~---~~Wllslly~~tFG~fvg~s~~lp~~~~~-- 281 (462)
T PRK15034 244 -------------------------------------DQLPVLQRL---HLWLLSLLYLATFGSFIGFSAGFAMLAKT-- 281 (462)
T ss_pred -------------------------------------HHHHHhCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 222233333 34555566666666666666666655421
Q ss_pred cCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-h-----chhHHHHHH
Q 011416 315 RCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-Y-----QSNILTTGL 388 (486)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~ 388 (486)
.++............+...+.++++|+++||+|+++++.++.+.+.++...... . .+.+.....
T Consensus 282 ----------~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~ 351 (462)
T PRK15034 282 ----------QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAV 351 (462)
T ss_pred ----------HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence 233333333344556788899999999999999999998888777666543222 1 133444444
Q ss_pred HHHHHHhhhhhhhhHhhhccccccc---------------------cchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-
Q 011416 389 LFGARMCVMGAFTVSLIYAAEIYPT---------------------SVRSTGAGAANAMGRIGGMVCPLVAVALVANCH- 446 (486)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g- 446 (486)
.+...++.+..+...+-++.+++|+ ++.|.+.|+....+.+|+++.|.+.|...+..|
T Consensus 352 ~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~ 431 (462)
T PRK15034 352 FMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGS 431 (462)
T ss_pred HHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCC
Confidence 4444566666667777777777764 157899999999999999999999999998877
Q ss_pred cchHHHHHHHHHHHHHHHHhccc
Q 011416 447 QMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
+...++.+.+..+++.++.|...
T Consensus 432 ~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 432 PVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHh
Confidence 55677888888888888888775
No 37
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-35 Score=262.10 Aligned_cols=382 Identities=16% Similarity=0.144 Sum_probs=317.6
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
.++.+++.+.+..+.....+..+.+++++.+.+.+++|+|++|.+++.++..+...+..++.|.+.||+|.|++..++.+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 45667778888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcCC---CHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 011416 99 VTAGAGLLSSFSP---NYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL 175 (486)
Q Consensus 99 ~~~~~~~~~~~a~---~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~ 175 (486)
+..+.++..+++. +++++++.+++.|++.+...+..+++++|+||+++|.++|+.. ..|+|..+...++..+....
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 9999999998885 4559999999999999988999999999999999999999999 89999999999999998888
Q ss_pred C---cHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccc
Q 011416 176 D---WRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPEL 251 (486)
Q Consensus 176 ~---w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (486)
+ ||.+-.+..+..++. +..++...|.|+.....++...
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~-------------------------------------- 208 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP-------------------------------------- 208 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch--------------------------------------
Confidence 8 999988888777775 4456666666542111111000
Q ss_pred hhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchh
Q 011416 252 VHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL 331 (486)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (486)
..++.++++ +..|.+...++.....+.++..+.+.+.+ ++++.++.++
T Consensus 209 -------------------~~~~~v~~~---~~~W~lsllY~~tFG~Fvgfs~~l~~~~~----------~~fg~~~~~A 256 (417)
T COG2223 209 -------------------AQLKAVFSN---KDTWLLSLLYFATFGGFVGFSAYLPMYLV----------TQFGLSPVTA 256 (417)
T ss_pred -------------------hHHHHHhcC---cchHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhcCCChhhH
Confidence 023333333 44566677777777777777777777663 4668999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-------chhHHHHHHHHHHHHhhhhhhhhHh
Q 011416 332 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-------QSNILTTGLLFGARMCVMGAFTVSL 404 (486)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (486)
+.......+.+.+.++++|+++||+|.++++...+..++++..+.... .+........+..+++.+......+
T Consensus 257 g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvf 336 (417)
T COG2223 257 GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVF 336 (417)
T ss_pred HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchhe
Confidence 999999999999999999999999999999999999888888777763 3345555556667778888888888
Q ss_pred hhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHhcccccc
Q 011416 405 IYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 405 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
.++..++|+ +.|.+.|+...++++|++.-|...|...+.+| +...|+++..+.+++.+..+....++
T Consensus 337 k~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 337 KMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred eechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999975 58999999999999999999999999999998 77788888999888888777765443
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.8e-34 Score=274.93 Aligned_cols=380 Identities=13% Similarity=-0.003 Sum_probs=280.7
Q ss_pred CchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 011416 20 GKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALV 99 (486)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~ 99 (486)
++..+.....+.+..+...+....+.+.+|.+.+++|.|..+.++..+.+.+++.+++++.|+++||+|||+++..+..+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 35566777777788888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Q 011416 100 TAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 100 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
.+++.+++.++++++.+++.|+++|++.+.. +...+.+.|++|+++|.++.++......+|..++|.+++.+.+..+||
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~ 167 (406)
T PRK15402 88 FILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWR 167 (406)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 9999999999999999999999999999887 677788899999999999999999988999999999999998989999
Q ss_pred HHHHHhHHHHHHHHH-HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhccc
Q 011416 179 WLLGLSSIPSFILLA-FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSS 257 (486)
Q Consensus 179 ~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (486)
+.|++.+++.++..+ .++..||+++... ++.+.++ .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~------------------------------------ 204 (406)
T PRK15402 168 GMFVLFAALAALSFFGLWRAMPETAGRVG---EKLSLKE----L------------------------------------ 204 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcccc---ccccHHH----H------------------------------------
Confidence 999998887776544 3445666543110 0000000 0
Q ss_pred CCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHH
Q 011416 258 NGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFI 337 (486)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (486)
...++.+++++..+.... ..+......+....+.|.+. .+..+.++.+.+.....
T Consensus 205 ------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~----------~~~~g~~~~~~g~~~~~ 259 (406)
T PRK15402 205 ------------GRDYKLVLKNRRFVAGAL---ALGLVSLPLLAWIALSPVIL----------ISGEQLSSYEYGLLQVP 259 (406)
T ss_pred ------------HHHHHHHHcCcHHHHHHH---HHHHHHHHHHHHHHHhHHHH----------HHHhCCCHHHHHHHHHH
Confidence 013344444443332222 22112222222222333222 12346777788887777
Q ss_pred HHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-----chhHHHHHHHHHHHHhhhhhhhhHhhhcccccc
Q 011416 338 TSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-----QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYP 412 (486)
Q Consensus 338 ~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (486)
..++.+++.++.+++.||+++|+.+.++.++.+++...+... .+.+......++.+++.+...+......... +
T Consensus 260 ~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~ 338 (406)
T PRK15402 260 VFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-S 338 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-c
Confidence 778889999999999999999999888877776666555432 2333445556667777776666665554443 3
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 413 TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 413 ~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
++++|+..++.+....++..+++.+.+.+.+..+........++..++...+...+
T Consensus 339 ~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 339 DVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999888776654444444444443433333
No 39
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=8.9e-36 Score=286.34 Aligned_cols=397 Identities=11% Similarity=0.037 Sum_probs=284.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHH
Q 011416 18 GFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEA 97 (486)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~ 97 (486)
+++.++|.++..+++.......+...++...|.+.+++|+|.++.+++.+.+.++..++.++.|+++||+|||++++.+.
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 91 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGG 91 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhH
Confidence 56677888888888887777777777889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcCCCHHHHHH-HHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 011416 98 LVTAGAGLLSSFSPNYITLIT-LRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL 175 (486)
Q Consensus 98 ~~~~~~~~~~~~a~~~~~l~~-~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~ 175 (486)
++.++++++++++++++.+++ .|++.|++.+.. ++..+++.++++ ++|+++.++.+.+..+|..++|++++.+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 92 LLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 999999999999999998875 579999999876 666677788885 78999999999999999999999999999999
Q ss_pred CcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhc
Q 011416 176 DWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLL 255 (486)
Q Consensus 176 ~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (486)
|||+.|++.+++.++..+..+++.+.++.. .+.+.++ . ... +.+ ....+ .
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~---------~~~--~~~---------~~~~~--~------ 220 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRPVGPSQ-RVSKSKS-K---------EGL--PPD---------GSTKK--L------ 220 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCccc-ccccccc-c---------ccC--CCC---------Ccccc--c------
Confidence 999999999887776554443333221100 0000000 0 000 000 00000 0
Q ss_pred ccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHH
Q 011416 256 SSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDE 335 (486)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (486)
......++..+...++ +++++.. +......+.....++....+.+.+. ++.+.+..+++...
T Consensus 221 ---~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~~~~~~~~~~l~~~~-----------~~~g~s~~~~g~~~ 282 (455)
T TIGR00892 221 ---SKKSTAEKINRFLDFS-LFTHRGF---LVYLSGNVIMFLGFFAPIIFLVPYA-----------KDKGVDEYEAAFLL 282 (455)
T ss_pred ---cccchhhhhhhhcchH-HhcCchH---HHHHHHHHHHHHHccchHHHHHHHH-----------HHcCCCHHHHHHHH
Confidence 0000000000011122 3333322 2222223333334444444445433 23478889999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHh--chhHHHHH--HHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccc
Q 011416 336 FITSLAEIPGLLLAAILVDTA--GRKLSITI--MFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIY 411 (486)
Q Consensus 336 ~~~~i~~~~~~~~~g~l~dr~--g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (486)
...+++.++++++.|++.||. ++++...+ +.+..+++.+.....++.+...+..++.+++.+...+...+.+.|.+
T Consensus 283 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~ 362 (455)
T TIGR00892 283 SIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLV 362 (455)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHh
Confidence 999999999999999999973 33433322 33333344444444556666667777888888888888899999999
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Q 011416 412 PTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSIL 463 (486)
Q Consensus 412 ~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~ 463 (486)
|++++++++|+.+...++|++++|.+.|.+.|..+ +...+.+.+++.+++.+
T Consensus 363 ~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 363 GAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999999999999875 66777777666655544
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=3.5e-34 Score=270.28 Aligned_cols=367 Identities=14% Similarity=0.086 Sum_probs=265.4
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhh
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLL 106 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 106 (486)
+....+..+..........+.+|.+.+|+|.+.++.|++.+++.+++.+++++.|+++||+|||+++..+..+.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 34455666777788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhH
Q 011416 107 SSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSS 185 (486)
Q Consensus 107 ~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~ 185 (486)
+++++|++.+++.|++.|++.+.. +....++.|++++++|++++++...+..+|..+++++++.+.+..+||++|++.+
T Consensus 85 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~ 164 (382)
T PRK10091 85 FTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIA 164 (382)
T ss_pred HHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHH
Confidence 999999999999999999999887 6666788899999999999999999999999999999999999899999999988
Q ss_pred HHHHHHHH-HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcc
Q 011416 186 IPSFILLA-FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTT 264 (486)
Q Consensus 186 ~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (486)
++.++..+ ...++||.++. ++.+ .++
T Consensus 165 ~~~~~~~~~~~~~lp~~~~~----~~~~-~~~------------------------------------------------ 191 (382)
T PRK10091 165 VFNIAVLASIYFWVPDIRDE----AKGG-LRE------------------------------------------------ 191 (382)
T ss_pred HHHHHHHHHHHHhCCCCCcc----cccC-HHH------------------------------------------------
Confidence 87766543 34556765321 0000 000
Q ss_pred cCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHH
Q 011416 265 EGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIP 344 (486)
Q Consensus 265 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 344 (486)
.++.+++++. +......+......+....+.+.+. .+..|.++.+.+.......++.++
T Consensus 192 -------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~g~s~~~~~~~~~~~~~~~~i 250 (382)
T PRK10091 192 -------QFHFLRSPAP----WLIFAATMFGNAGVFAWFSYIKPYM----------MFISGFSETSMTFIMMLVGLGMVL 250 (382)
T ss_pred -------HHHHhcChHH----HHHHHHHHHHHHHHHHHHHHHHHHH----------HHhcCCCHHHHHHHHHHHHHHHHH
Confidence 1111111211 1111111111111111111222111 123578888999999999999999
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hchhHHHHHHHHHHHHhhhhhhhhHh-hhccccccccchhhHhHH
Q 011416 345 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-YQSNILTTGLLFGARMCVMGAFTVSL-IYAAEIYPTSVRSTGAGA 422 (486)
Q Consensus 345 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 422 (486)
++++.+++.||+++|+.+..+..+.+++.+.+.. .++.+......++.+.+..+..+... ....+..+++.++.+ .
T Consensus 251 g~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~ 328 (382)
T PRK10091 251 GNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--G 328 (382)
T ss_pred HhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--H
Confidence 9999999999999999988888777777655543 33333334444444444444444333 334444455545544 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hccchHHHHHHHHHHHHHHHHhccc
Q 011416 423 ANAMGRIGGMVCPLVAVALVAN-CHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 423 ~~~~~~~g~~~~~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.+...++|..++|.+.|.+.|. .++...+...++++++.........
T Consensus 329 ~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 329 GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 4677889999999999999996 4677777776666655554444443
No 41
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=6.2e-35 Score=280.22 Aligned_cols=403 Identities=16% Similarity=0.142 Sum_probs=275.8
Q ss_pred CchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 011416 20 GKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALV 99 (486)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~ 99 (486)
.+.++..+....+.+...+.++..+....|.+++ +|++.++.+++.+++.++..+++++.|+++||+|||+++..+.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~ 100 (438)
T TIGR00712 22 KRLRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHH
Confidence 3445667777777888888888888888888876 599999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcC----CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh-c
Q 011416 100 TAGAGLLSSFS----PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM-P 173 (486)
Q Consensus 100 ~~~~~~~~~~a----~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~-~ 173 (486)
.+++.++.++. ++++.+.+.|++.|++.+.. ++....+.|++|+++|++++++.+.+.++|..+++.+.+... +
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 101 SAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 99998887764 46788889999999999887 667788889999999999999999999999999988776544 4
Q ss_pred CCCcHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccch
Q 011416 174 RLDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELV 252 (486)
Q Consensus 174 ~~~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (486)
..+||..|++.++++++. ++.++++||+|+....++. ++.+ + +.+. +..+
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~---------~--~~~~------------~~~~----- 231 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPI-EEYR---------N--DYPD------------DYNE----- 231 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCc-hhcc---------c--cccc------------cccc-----
Confidence 579999999988887775 4456667776542110000 0000 0 0000 0000
Q ss_pred hhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhH
Q 011416 253 HLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLY 332 (486)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (486)
+ .+.+.+......+.+++++..+ ......++.....++...+.|.+.+ +..|.++.+++
T Consensus 232 -------~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~l~----------~~~g~s~~~~~ 290 (438)
T TIGR00712 232 -------K-AEQELTAKEIFMQYVLPNKLLW---YIAIANVFVYLLRYGVLDWSPTYLK----------EVKHFALDKSS 290 (438)
T ss_pred -------c-cccccchHHHHHHHHccCchHH---HHHHHHHHHHHHHHHHHHhHHHHHH----------HccCCChhhHH
Confidence 0 0000000000112234443322 2222223333444555566665542 23478888889
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHH---HHHHHHHhh--hchhHHHHHHHHHHHHhhhhhhhhHhhhc
Q 011416 333 IDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLS---CLFLLPLVT--YQSNILTTGLLFGARMCVMGAFTVSLIYA 407 (486)
Q Consensus 333 ~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (486)
+......+.++++.+++|++.||+++++....+.... .++.+.+.. ..+.+......+..+++..+.........
T Consensus 291 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 370 (438)
T TIGR00712 291 WAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHA 370 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 9888999999999999999999995432212222111 111122111 12233333333334443332222333467
Q ss_pred cccccccchhhHhHHHHHHHHHHH-HHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 408 AEIYPTSVRSTGAGAANAMGRIGG-MVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 408 ~~~~~~~~~~~~~g~~~~~~~~g~-~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
.|.+|++.|++++|+.+...++++ .++|.+.|.+.|+.|+...+.+..++.+++.+..+.+.+|.|
T Consensus 371 ~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 371 LELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 789999999999999999988875 689999999999999988888888888888888777776654
No 42
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.7e-33 Score=273.64 Aligned_cols=391 Identities=14% Similarity=0.084 Sum_probs=274.5
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhh
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGL 105 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 105 (486)
.+..++++.++..++...+.+..|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||+++..+..+.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34556677888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHh
Q 011416 106 LSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLS 184 (486)
Q Consensus 106 ~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~ 184 (486)
+++++++++.+++.|+++|++.+.. +...+++.|++|+++|+++.++.....++|..++|.+++.+.+..+||+.|++.
T Consensus 91 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~ 170 (471)
T PRK10504 91 FCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLIN 170 (471)
T ss_pred HHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHH
Confidence 9999999999999999999999988 777788999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHH------HHhcCCCCCCchhhhccccCCCCCCCCccchhhcc-
Q 011416 185 SIPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKI------AQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLS- 256 (486)
Q Consensus 185 ~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 256 (486)
.....+..+. ....|+++.. +.+.+......... ...+..+... . ..........
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~---~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~ 233 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNYTMQ---TRRFDLSGFLLLAVGMATLTLALDGSKGLG-L-------------SPLAIAGLVAV 233 (471)
T ss_pred HHHHHHHHHHHHHhCCCcccc---CCCCChHHHHHHHHHHHHHHHHHhcCCcCC-c-------------chHHHHHHHHH
Confidence 7766665443 3344443321 11212111110000 0000000000 0 0000000000
Q ss_pred -----cCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchh
Q 011416 257 -----SNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL 331 (486)
Q Consensus 257 -----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (486)
-....++.+.+.+..+.+ +++++.....+...++. ...+.....+.+.+.+ ...|.++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~----------~~~g~~~~~~ 299 (471)
T PRK10504 234 GVVALLLYLLHARNNNRALFSLK-LFRTRTFSLGLAGSFAG---RIGSGMLPFMTPVFLQ----------IGLGFSPFHA 299 (471)
T ss_pred HHHHHHHHHHHHhcCCCCccCHH-HhcccchHHHHHHHHHH---HHHHHHHHHHHHHHHH----------HHcCCCHHHH
Confidence 000000000001111222 44444433333322222 1222222223332221 1246888888
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh---chhHHHHHHHHHHHHhhhhhhhhHhhhcc
Q 011416 332 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY---QSNILTTGLLFGARMCVMGAFTVSLIYAA 408 (486)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (486)
++......++.+++.++.+++.||+++|+.+..+..+.++...++... .+.+......++.+++.+..++.......
T Consensus 300 g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 379 (471)
T PRK10504 300 GLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTL 379 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888888888899999999999999999988888777665555442 22222333455566777777888888888
Q ss_pred ccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011416 409 EIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 409 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
+..|++.+++++|+.+....+|..+++.+.|.+.+..++
T Consensus 380 ~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 380 KDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999887765
No 43
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=3.2e-34 Score=270.24 Aligned_cols=352 Identities=15% Similarity=0.064 Sum_probs=272.4
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 109 (486)
+..+.++..+......+.+|.+.++++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 34556777777788888899999999999999999999999999999999999999999999999999999988888887
Q ss_pred CC-----CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 011416 110 SP-----NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGL 183 (486)
Q Consensus 110 a~-----~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~ 183 (486)
++ |++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+.++|.+++|.+++.+.+..+||+.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 77 9999999999999999988 77789999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHHhhcc--CCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCC
Q 011416 184 SSIPSFILLAFLGFQ--PESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGN 261 (486)
Q Consensus 184 ~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (486)
.++..++..+..+.+ ||+++. ++++..++..++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---------------------------------------- 199 (365)
T TIGR00900 164 DAVGFAISALLIVSVRIPELAAS----EIQALSNAVLRDT---------------------------------------- 199 (365)
T ss_pred HHHHHHHHHHHHHhcccccCCCc----cccccchhHHHHH----------------------------------------
Confidence 877666654443333 222110 0000000000000
Q ss_pred CcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHH-HHHhhhccccccCCCCccccCCCCCchhHHHHHHHHh
Q 011416 262 KTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVV-LLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSL 340 (486)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 340 (486)
...++.+++++..+......... ...+.... .+.|.+.+ +..+.++.+.+.......+
T Consensus 200 --------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 258 (365)
T TIGR00900 200 --------REGIKFVLKNPLLRTLLLLALLF---NLVFAPAIVALFPYVQS----------KYLGRGSTHYGWVLAAFGL 258 (365)
T ss_pred --------HhHHHHHHcCcHHHHHHHHHHHH---HHHHHHHHHHHhHHHHH----------HHhCCchHHHHHHHHHHHH
Confidence 01344455554433333222222 12222221 23333221 1246788888999999999
Q ss_pred hHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhH
Q 011416 341 AEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQS-NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 419 (486)
Q Consensus 341 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (486)
+.+++.++.+++.||.+||+.+..+..+.+++...+...++ .+...+..++.+++.+...+...++..|..|++.|+++
T Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (365)
T TIGR00900 259 GALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRV 338 (365)
T ss_pred HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999999999999999999988887777777666665543 56666777788888888889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011416 420 AGAANAMGRIGGMVCPLVAVALVANCH 446 (486)
Q Consensus 420 ~g~~~~~~~~g~~~~~~i~g~l~~~~g 446 (486)
.|+.+...+++..++|.+.|.+.|..|
T Consensus 339 ~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 339 FGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999998754
No 44
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.3e-33 Score=269.85 Aligned_cols=373 Identities=15% Similarity=0.109 Sum_probs=276.4
Q ss_pred HHHHHHHHHHHhhHhhhhchhchhhhhcCCCcch-----hHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHH
Q 011416 28 AYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTE-----ESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAG 102 (486)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~ 102 (486)
..++++.++.........+.+|.+.+++|.+..+ .|++.+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 3445566777777788888999999999998765 48999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 011416 103 AGLLSSFSPNYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLG 182 (486)
Q Consensus 103 ~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~ 182 (486)
+.+++.+++|++.+++.|++.|++.+..+....++.+++|+++|+++.++...+..+|..++|.+++.+.+..+||+.|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 176 (408)
T PRK09874 97 VMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFF 176 (408)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 99999999999999999999999866556666788899999999999999999999999999999999998899999999
Q ss_pred HhHHHHHHHHH-HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCC
Q 011416 183 LSSIPSFILLA-FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGN 261 (486)
Q Consensus 183 ~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (486)
+.+++.++..+ ..++++|+++.. ++++ .. ..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~-~~~~----------------------------------------- 210 (408)
T PRK09874 177 ITASVLFLCFLVTLFCIRENFQPV---SKKE-ML-HMRE----------------------------------------- 210 (408)
T ss_pred HHHHHHHHHHHHHHHHhccCcccc---cchh-hh-HHHH-----------------------------------------
Confidence 98887766544 344455543211 0000 00 0000
Q ss_pred CcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCC---chhHHHHHHH
Q 011416 262 KTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQD---ANLYIDEFIT 338 (486)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 338 (486)
..+.+.+++............ .........+.+.+... ..+... ...+......
T Consensus 211 ----------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~~ 267 (408)
T PRK09874 211 ----------VVTSLKNPKLVLSLFVTTLII---QVATGSIAPILTLYVRE----------LAGNVSNIAFISGMIASVP 267 (408)
T ss_pred ----------HHHhCcCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHH----------HhccchHHHHHHHHHHHHH
Confidence 111111122212111111111 11111111122211100 001111 1234555566
Q ss_pred HhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhh
Q 011416 339 SLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRST 418 (486)
Q Consensus 339 ~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (486)
+++.+++.+..|++.||++||+.+..+..+..++.+.....++.+...+..++.+++.+...+...+...+..|++.+|+
T Consensus 268 ~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 347 (408)
T PRK09874 268 GVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGR 347 (408)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccccee
Confidence 77888889999999999999999988888777766666555566666666777888888888888888888999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 419 GAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 419 ~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.+++.+....+|..++|.+.|.+.+..|+...|...+++.+++.++.+...
T Consensus 348 ~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 348 IFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred eehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988888888777766544
No 45
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.6e-34 Score=279.26 Aligned_cols=427 Identities=24% Similarity=0.294 Sum_probs=307.0
Q ss_pred HHHHHHHHHHHHHHHhh--Hhhhhchhchhhhhc-----CCCc--chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHH
Q 011416 24 CFVLAYAGLGWVAEAME--IMILSFVGPTVKSEW-----NLSS--TEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFL 94 (486)
Q Consensus 24 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~s~--~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~ 94 (486)
........+..+..+.+ ....++....+.++. ..+. .+.+|+.+.+.++..++++++|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 33344444555555554 455556666666543 2222 35599999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 011416 95 GEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP 173 (486)
Q Consensus 95 ~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~ 173 (486)
++.++..++.+++++++|+++++++|+++|+|.|.. .+...+++|..|++.||...+..+....+|..++..++....+
T Consensus 124 ~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999999999999999 6777899999999999999999999999999999666666543
Q ss_pred C-CCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccch
Q 011416 174 R-LDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELV 252 (486)
Q Consensus 174 ~-~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (486)
. .+||..+.+..+++++..+..+++||+|+|+..+++.+++++.+.+++..+..+.+.+ ....+ .
T Consensus 204 ~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~-~~~~~-------------~ 269 (513)
T KOG0254|consen 204 VYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVE-LELLK-------------I 269 (513)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHH-HHHHH-------------H
Confidence 3 5899999999999999877788999999999999999999999888876331111100 00000 0
Q ss_pred hhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchh
Q 011416 253 HLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLL-LFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL 331 (486)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (486)
.... .....+.+ ..+++++++...++....... .+.+...+....+|.+.+.+ ..+.+...
T Consensus 270 ~~~~---~~~~~~~~---~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~-----------~~g~~~~~- 331 (513)
T KOG0254|consen 270 KLLV---EAEVAEGK---ASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK-----------SAGLKSDT- 331 (513)
T ss_pred HHHH---hhhccccc---ccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH-----------hcCCCCch-
Confidence 0000 00000000 035555554444544433333 33333333333334443331 22333332
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-------------hhHHHHHHHHHHHHhhhh
Q 011416 332 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ-------------SNILTTGLLFGARMCVMG 398 (486)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 398 (486)
.......++..+++.+++..+.||+|||+.++.+...+.++++++.... .........+....+..+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g 411 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIG 411 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcc
Confidence 5666777888889999999999999999999999999999888776511 112223333344455566
Q ss_pred hhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH-HHhcccccccCCCc
Q 011416 399 AFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSIL-SVMLIPFETKGQEL 477 (486)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 477 (486)
..++.+.+.+|.+|.+.|+.+.++....+++.+.+-......+.+..+....|..+++++.+..+ ..+.+.||+|+++.
T Consensus 412 ~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sl 491 (513)
T KOG0254|consen 412 WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTL 491 (513)
T ss_pred cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcH
Confidence 67888899999999999999999999999988888877776666665545667777777777777 78888999999998
Q ss_pred ccccc
Q 011416 478 SDTVD 482 (486)
Q Consensus 478 ~~~~~ 482 (486)
+|.++
T Consensus 492 eei~~ 496 (513)
T KOG0254|consen 492 EEINE 496 (513)
T ss_pred HHHHH
Confidence 87654
No 46
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=263.86 Aligned_cols=360 Identities=15% Similarity=0.129 Sum_probs=264.8
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhh
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLL 106 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 106 (486)
+..++++.++.........+.+|.+.+++|.|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhH
Q 011416 107 SSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSS 185 (486)
Q Consensus 107 ~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~ 185 (486)
+++++|++.+++.|+++|++.+.. +...+.+.+..++++|+++++....+.++|..+|+.+++.+.+...|...+.. +
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~-~ 166 (381)
T PRK03633 88 LGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVT-G 166 (381)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHH-H
Confidence 999999999999999999999887 66667777888899999999999999999999999999998765444433332 2
Q ss_pred HHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcc
Q 011416 186 IPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTT 264 (486)
Q Consensus 186 ~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (486)
....... +.....+++++ ++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~------~~~~--------------------------------------------------- 189 (381)
T PRK03633 167 LVLAAILPLLFTRILNQQA------ENHD--------------------------------------------------- 189 (381)
T ss_pred HHHHHHHHHHHhcccCCCC------CCCC---------------------------------------------------
Confidence 2222111 11111111100 0000
Q ss_pred cCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHH
Q 011416 265 EGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIP 344 (486)
Q Consensus 265 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 344 (486)
..+.++.++++..+......+. ....+.....+.|.+. ++.+.++...+.......++.++
T Consensus 190 -----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~lp~~~-----------~~~g~s~~~~g~~~~~~~~~~~~ 250 (381)
T PRK03633 190 -----STSIWPMLKLRQARLGVNGCII---SGIVLGSLYGLMPLYL-----------NHQGMSDASIGFWMALLVSAGIL 250 (381)
T ss_pred -----CCCHHHHHHhcchHHHHHHHHH---HHHHHHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHHHHHHHH
Confidence 0012222333322221111111 1112222223344333 23478888888888888999999
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHH
Q 011416 345 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAAN 424 (486)
Q Consensus 345 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 424 (486)
+++..|++.||+++|+.+..+..+.+++.+.+. .. ........+.+.+.....|...+...|..|+++++...+..+
T Consensus 251 ~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 327 (381)
T PRK03633 251 GQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALL 327 (381)
T ss_pred HHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 999999999999999998888777776655443 11 122233444555556677888888899998888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHh
Q 011416 425 AMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 425 ~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 466 (486)
...++|..++|.+.|++.|+.++...|.+.+.+.++..+..+
T Consensus 328 ~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 328 LSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999988888887777766554443
No 47
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.5e-33 Score=274.20 Aligned_cols=391 Identities=15% Similarity=0.115 Sum_probs=282.2
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhh
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGL 105 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 105 (486)
.+..++++.+...++....++..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHh
Q 011416 106 LSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLS 184 (486)
Q Consensus 106 ~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~ 184 (486)
++++++|++.+++.|+++|++.+.. +...+++.|++|+++|+++++++..+..+|..++|.+++.+.++.+||+.|++.
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~ 162 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLIN 162 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhh
Confidence 9999999999999999999999988 778899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHH-HhhccCCCchhhhhcCChHHHHHHHHH-----H-HH-hcCCCCCCchhhhccccCCCCCCCCccchhhcc
Q 011416 185 SIPSFILLA-FLGFQPESPRYLCLKGRTAEAHRALEK-----I-AQ-VNKTKLPNGKLVARRSTLPTGERAPPELVHLLS 256 (486)
Q Consensus 185 ~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (486)
+.+.++..+ ..+++||+++. .+++.+........ . .. ....+.+. ...+........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 227 (485)
T TIGR00711 163 VPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGW-------------FDSNEILILSIT 227 (485)
T ss_pred hHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCC-------------CCchHHHHHHHH
Confidence 877766544 34455664331 11111111110000 0 00 00000000 000000000000
Q ss_pred c-----CCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchh
Q 011416 257 S-----NGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL 331 (486)
Q Consensus 257 ~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (486)
. ....++.+.+++..+.+ +++++.... .....+...+.++....+.|.+.+ +..|.++.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~----------~~~g~s~~~~ 293 (485)
T TIGR00711 228 GLVAIIAFVVWELTDDNPLVDLR-LFKYRNFTI---GCVYMSLLGLGLYGSFYLLPLYLQ----------QVLGYTALQA 293 (485)
T ss_pred HHHHHHHHHHHHHcCCCCccCHH-HHcCCChHH---HHHHHHHHHHHHHHHHHHHHHHHH----------HhcCCCHHHH
Confidence 0 00000000011111222 333332222 222223333344444444454431 2347888999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh----hchhHHHHHHHHHHHHhhhhhhhhHhhhc
Q 011416 332 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT----YQSNILTTGLLFGARMCVMGAFTVSLIYA 407 (486)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (486)
+.......++.+++.++.|++.||++||+.+..+..+.+++...+.. ..+.+......++.+++.+...+......
T Consensus 294 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~ 373 (485)
T TIGR00711 294 GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIA 373 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888877776652 12334445556777888877777777777
Q ss_pred cccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011416 408 AEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC 445 (486)
Q Consensus 408 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~ 445 (486)
.+..|+++++++.|+.+...++|+.+++.+.+.+.++.
T Consensus 374 ~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 374 LSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999998753
No 48
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=5.3e-33 Score=262.75 Aligned_cols=364 Identities=15% Similarity=0.113 Sum_probs=265.6
Q ss_pred HHHHHHHhhHhhhhchhch-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH-HHHHHHHhhhhhhc
Q 011416 32 LGWVAEAMEIMILSFVGPT-VKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLG-EALVTAGAGLLSSF 109 (486)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~-~~~~~~~~~~~~~~ 109 (486)
+.+++..+......+.+|. +.+++|.|..+.|++.+++.+...+.+++.|+++||+||||.++. +..+.+++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3456677777777787876 578899999999999999999999999999999999999887654 56666777788899
Q ss_pred CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHH
Q 011416 110 SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMW--MVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSI 186 (486)
Q Consensus 110 a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~ 186 (486)
++|++.+++.|++.|.+.+.. +...++..|+.++++|++. .+....+.++|.++++++++.+.+..+||+.|++.++
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 999999999999998877766 6666778888887777654 6888888999999999999999999999999999988
Q ss_pred HHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCccc
Q 011416 187 PSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTE 265 (486)
Q Consensus 187 ~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (486)
+.++..+. ++++||+|++...+++ ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------------------------------------------- 190 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYPRGAPGALT----RL------------------------------------------------- 190 (375)
T ss_pred HHHHHHHHHHHhCCCcccCcccccC----cc-------------------------------------------------
Confidence 77765444 4557876542100000 00
Q ss_pred CCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHH
Q 011416 266 GKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPG 345 (486)
Q Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 345 (486)
+.++.++++..+........... .......+.+.+. .++.+.++.+.+.......+..+++
T Consensus 191 ------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~g~~~~~~g~~~~~~~~~~~~~ 251 (375)
T TIGR00899 191 ------EVRGLLASRDTRLLFVACTLMWG---CNILYIINMPLLI----------IHELGLPDKLAGLMMGTAAGLEIPF 251 (375)
T ss_pred ------hhhhhhcCcchHHHHHHHHHHHH---HHHHHHhhhHHHH----------HHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 11112222222222221111111 1111111222221 1234677788887777777778888
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHH
Q 011416 346 LLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANA 425 (486)
Q Consensus 346 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 425 (486)
.++.|++.||++||+.+..+.+...+....+...++.+.......+.+++.+...+....+..|..|++ ++++.++.+.
T Consensus 252 ~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 330 (375)
T TIGR00899 252 MLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTN 330 (375)
T ss_pred HHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHH
Confidence 999999999999999888777666555555444555555555666667777777788888888888764 6799999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 426 MGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 426 ~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
..++|..++|.+.|.+.+..|+...+.+.+++.+++.++....
T Consensus 331 ~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 331 TGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999888888888777776665443
No 49
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=6.7e-33 Score=263.09 Aligned_cols=346 Identities=17% Similarity=0.197 Sum_probs=258.6
Q ss_pred HHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhh
Q 011416 28 AYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLS 107 (486)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 107 (486)
..+.+..+..........+..|.+.+++|.|..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 33334446666777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHH
Q 011416 108 SFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSI 186 (486)
Q Consensus 108 ~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~ 186 (486)
.++++++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+||..|++.++
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 167 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSL 167 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999988 77778999999999999999999999999999999999999998999999998887
Q ss_pred HHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCccc
Q 011416 187 PSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTE 265 (486)
Q Consensus 187 ~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (486)
..++..+. .++.||+++... + ++.++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~----------------------------------------------- 196 (385)
T TIGR00710 168 AGILLSALIFFILPETLPYEA---R-IQISTYF----------------------------------------------- 196 (385)
T ss_pred HHHHHHHHHHHhCCCCCCCcc---c-CCHHHHH-----------------------------------------------
Confidence 77665443 445566543110 0 0000000
Q ss_pred CCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHH
Q 011416 266 GKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPG 345 (486)
Q Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 345 (486)
..+++.++++..+.... ........++....+.|.+. .+..+.++.+.+.......++.+++
T Consensus 197 -----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~g~~~~~~g~~~~~~~~~~~~~ 258 (385)
T TIGR00710 197 -----ETFLLLLKSKMFWGYAL---IYGASFGGFFAFFSGAPFVY----------IDIMGVSPSVFGLLFALNIIAMIFG 258 (385)
T ss_pred -----HHHHHHHcCchhHHHHH---HHHHHHHHHHHHHHcChHHH----------HHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 02333333333222221 11122222233333333222 1245788888999999999999999
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-----chhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHh
Q 011416 346 LLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-----QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGA 420 (486)
Q Consensus 346 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (486)
.++.+++.||+++|+.+..+..+..++.+.+... ...........+.+++.+...+.......|..| +.++++.
T Consensus 259 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~ 337 (385)
T TIGR00710 259 GFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTAS 337 (385)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHH
Confidence 9999999999999998887777766665554432 122333444556677777788888888888887 5689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 011416 421 GAANAMGRIGGMVCPLVAVALVA 443 (486)
Q Consensus 421 g~~~~~~~~g~~~~~~i~g~l~~ 443 (486)
++.+.....++.+.+.+.+.+.+
T Consensus 338 ~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 338 ALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 99999988766666666664433
No 50
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1e-32 Score=261.97 Aligned_cols=367 Identities=13% Similarity=0.038 Sum_probs=256.7
Q ss_pred HHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhh---hc
Q 011416 33 GWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLS---SF 109 (486)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~ 109 (486)
+.++...........++.+.+++|.|.++.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++++++ +.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~ 100 (402)
T TIGR00897 21 GVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGL 100 (402)
T ss_pred HHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333333333333345566778999999999999999999999999999999999999999999999999887654 23
Q ss_pred -CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCcHHHHHHhHH
Q 011416 110 -SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGS-VSEAIGAWIIMPRLDWRWLLGLSSI 186 (486)
Q Consensus 110 -a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~i~~~l~~~l~~~~~w~~~f~~~~~ 186 (486)
.++++.+++.|++.|++.+.. +...+++.+++|+++|++++|+.+.+.++|. ++++.+++.+.+..||+..++....
T Consensus 101 ~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 101 GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 358889999999999998776 5666788899999999999999999999997 6899999998888897766655444
Q ss_pred HHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCccc
Q 011416 187 PSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTE 265 (486)
Q Consensus 187 ~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (486)
..++..+. .++.++.++.. .++++++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------------------------------------------- 209 (402)
T TIGR00897 181 FVLTGGVIALFSNKDIFTPQ-HMQTREKFS-------------------------------------------------- 209 (402)
T ss_pred HHHHHHHHHHhccCCCCCcc-cccCCcchh--------------------------------------------------
Confidence 33333222 33334322100 000000000
Q ss_pred CCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHH
Q 011416 266 GKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPG 345 (486)
Q Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 345 (486)
+....++.+++++. ++......++....+++...+.|.+. ++.|.+..+.+.......++.+++
T Consensus 210 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~-----------~~~g~s~~~~~~~~~~~~~~~~ig 273 (402)
T TIGR00897 210 --ELGKAATILFTNPN---VLLGGMVRIINTIGLFGFAVFLPMFV-----------AELGFSTSEWLQIWGTFFFTNIVF 273 (402)
T ss_pred --hHHHHHHHHHcChh---HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHcCCChhHHHHHHHHHHHHHHHH
Confidence 00012344444443 23333334444555566666666554 345788888888888889999999
Q ss_pred HHHHHHHHHHhchhHHHH-HHHHHHHHHHHHHhh-----hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhH
Q 011416 346 LLLAAILVDTAGRKLSIT-IMFTLSCLFLLPLVT-----YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 419 (486)
Q Consensus 346 ~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (486)
.+..|+++||++||+... .+.+...++.+.+.. .++.+...+..++.+++.+...+ ......|..| ++|+++
T Consensus 274 ~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~ 351 (402)
T TIGR00897 274 NVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAA 351 (402)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHH
Confidence 999999999999887653 233333332222221 12344445556666666665544 3455566554 679999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 420 AGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 420 ~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
.|+.+...++++.++|.+.|.+.|..|+...+++.+++.+++.+...+.
T Consensus 352 ~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 352 MSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998888887777666554
No 51
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.6e-34 Score=273.72 Aligned_cols=369 Identities=18% Similarity=0.195 Sum_probs=263.5
Q ss_pred HHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC
Q 011416 32 LGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP 111 (486)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~ 111 (486)
+.++..+.++..+++..|.+.+++|+|..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCcHHHHHHhHHHHH
Q 011416 112 NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEA-IGAWIIMPRLDWRWLLGLSSIPSF 189 (486)
Q Consensus 112 ~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~-~l~~~l~~~~~w~~~f~~~~~~~~ 189 (486)
+++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|..+++ .++..+.+..+||+.|++.+++.+
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 9999999999999999988 77888999999999999999999999999999999 577777788899999998887776
Q ss_pred HH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCC
Q 011416 190 IL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKS 268 (486)
Q Consensus 190 ~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (486)
+. ++..++.+|+|+....++.+++ +.+ +.++++ +.++++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~----------~~~~~~-------------~~~~~~~~~ 204 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEEM--------------PNE----------EPDGDA-------------EKKEEELTK 204 (379)
T ss_pred HHHHHHheeeCCCccccccCccccC--------------ccc----------cccccc-------------ccccccccc
Confidence 65 4445556665532100000000 000 000000 000000011
Q ss_pred chhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHH
Q 011416 269 GLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLL 348 (486)
Q Consensus 269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 348 (486)
.....+.+++++..+ ...+..+...........+.+.+. .+..+.++.+.+.......++.+++.++
T Consensus 205 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 271 (379)
T TIGR00881 205 KQIFLQYVLLNKVLW---YISLGYVFVYVVRTGILDWSPLYL----------TQEKGFSKEKASWAFTLYELGGLVGTLL 271 (379)
T ss_pred hHHHHHHHHhcchHH---HHHHHHHHHHHHHHHHHHHHHHHH----------HHHhCCCHHHHHHHHHHHHHHcchhHHH
Confidence 111334444443322 223333333333344444444433 1234788888999999999999999999
Q ss_pred HHHHHHHhc-hhH-HHHHHH-HHHHHHHHHHhh--hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHH
Q 011416 349 AAILVDTAG-RKL-SITIMF-TLSCLFLLPLVT--YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAA 423 (486)
Q Consensus 349 ~g~l~dr~g-~~~-~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 423 (486)
.+++.||.. +|+ ...... ....++...... ..+.+......++.+....+..+.......|..|++.|+++.|+.
T Consensus 272 ~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 351 (379)
T TIGR00881 272 AGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFV 351 (379)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHH
Confidence 999999863 332 222221 222222222222 223333444445555555555666677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchH
Q 011416 424 NAMGRIGGMVCPLVAVALVANCHQMTA 450 (486)
Q Consensus 424 ~~~~~~g~~~~~~i~g~l~~~~g~~~~ 450 (486)
+...++|+.++|.+.|.+.|..|+...
T Consensus 352 ~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 352 GFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred HHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 999999999999999999999887654
No 52
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=8.2e-33 Score=261.08 Aligned_cols=370 Identities=12% Similarity=-0.023 Sum_probs=267.6
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 109 (486)
.+++.++..+.........+.+.++++.+..+.+++.+.+.+++.++++++|+++||+|||++++.+.++.+++++++.+
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH
Confidence 45556666665555556666778999999999999999999999999999999999999999999999999998888777
Q ss_pred CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHH
Q 011416 110 SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPS 188 (486)
Q Consensus 110 a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~ 188 (486)
+.+. ++.|+++|++.+.. |...+++.|++|+++|++++|+.+...++|.++||.+++.+.+. .|+..+.+.+...
T Consensus 88 ~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~ 163 (393)
T PRK11195 88 GIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIY 163 (393)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 6664 78899999999988 88889999999999999999999999999999999999999875 4887777766555
Q ss_pred HHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCC
Q 011416 189 FILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKS 268 (486)
Q Consensus 189 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (486)
++..+..+.+||+|++... ++++..+..++..
T Consensus 164 ~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~---------------------------------------------- 195 (393)
T PRK11195 164 LLAALFNLFIPRLGARRPG--QSWNPIALLRDFF---------------------------------------------- 195 (393)
T ss_pred HHHHHHHhcCCCCcccccc--cCCCHHHHHHHHH----------------------------------------------
Confidence 5455556677876532111 1111111111100
Q ss_pred chhhhHhhhchhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHH
Q 011416 269 GLSLFLMLFSSKLARTTILL-WLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLL 347 (486)
Q Consensus 269 ~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 347 (486)
..++.+++++..+..... .+.+.+.....+....+.+.. .|.++.+.+......+++.+++.+
T Consensus 196 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------lg~s~~~~G~~~~~~~~g~i~g~~ 259 (393)
T PRK11195 196 --HACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA--------------LGITLNQPAYLQAVVAIGIAVGAG 259 (393)
T ss_pred --HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------cCCChhHHHHHHHHHHHHHHHHHH
Confidence 023344444443333222 222222233333333444433 378888999999999999999999
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccc-hhhHhHHHHHH
Q 011416 348 LAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV-RSTGAGAANAM 426 (486)
Q Consensus 348 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~ 426 (486)
..+++.||.++++.+..+.. .++....+...++.+......++.|++.+...+...+...+..|++. +|++.++.+..
T Consensus 260 ~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~ 338 (393)
T PRK11195 260 AAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFN 338 (393)
T ss_pred HHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHH
Confidence 99999999988887776643 33433344444455555556667778777777777888888766654 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 427 GRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 427 ~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.+++..++..+.+.+ +..|-...+.+.+...++++.+.+.++
T Consensus 339 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 339 ENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999855 677877777766666666655555444
No 53
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-35 Score=261.08 Aligned_cols=433 Identities=22% Similarity=0.308 Sum_probs=319.3
Q ss_pred CchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhc--------CCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchH
Q 011416 20 GKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEW--------NLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRM 91 (486)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~ 91 (486)
.+++...+.+...+.+.+.+|..+++.+.|.+...+ ++++...+.+..+..+|..++|++.|++.||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 566677888888999999999999999988876554 245667789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhcCC-------CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHH
Q 011416 92 GFLGEALVTAGAGLLSSFSP-------NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVS 163 (486)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~a~-------~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i 163 (486)
++...++++.+++++++++. -.+++...|++.|+|.|+- |...+..+|...+++||...+.+.+..++|.+.
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999999888763 1567899999999999999 555567779999999999999999999999888
Q ss_pred HHHHHHHHhcC---------------CCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcC-ChHHHHHHHHHHHHhcCC
Q 011416 164 EAIGAWIIMPR---------------LDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKG-RTAEAHRALEKIAQVNKT 227 (486)
Q Consensus 164 ~~~l~~~l~~~---------------~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 227 (486)
|.+++..+..- .=||..+.+.+++.+..+...+.+||++++..... +.+.+.+..+ +
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~---k---- 268 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMK---K---- 268 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccc---c----
Confidence 88877665321 12999999999999999999999999998763222 2121111000 0
Q ss_pred CCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 228 KLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLIS 307 (486)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (486)
..+. +.++ . +......+..++....+...+..++.+.++..+..|+...+.+|....++.
T Consensus 269 ~~~~---------~~~~---------~--~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s 328 (538)
T KOG0252|consen 269 VLSV---------DIEA---------E--STAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQS 328 (538)
T ss_pred cccc---------ccch---------h--hccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHH
Confidence 0000 0000 0 000111111122222344444444667788888899999999999999998
Q ss_pred hhccccccCCCCccccCCCCC-chhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch-----
Q 011416 308 ELSSLDTRCRSPLMFSHHPQD-ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQS----- 381 (486)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~----- 381 (486)
.+.+...+.+..... ... ..+-....+...+.++|..+...++|++||++..+.+++++++..+.+....+
T Consensus 329 ~I~~~ig~~~~~~~~---~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~ 405 (538)
T KOG0252|consen 329 VIFSAIGVIPSANTY---HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENT 405 (538)
T ss_pred HHHHhhccCCCcchH---HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccccc
Confidence 887544433222111 000 01112223333444557778888999999999999999999999998887444
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH-----hhccchHHHHHHH
Q 011416 382 NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA-----NCHQMTAVVLLVV 456 (486)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~-----~~g~~~~~~~~~~ 456 (486)
....+...+...++..+.......+.+|.+|.+.|++..|+..+.+..|++++...+.++.+ ..+....++++++
T Consensus 406 ~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~ 485 (538)
T KOG0252|consen 406 IGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAG 485 (538)
T ss_pred CceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHH
Confidence 12223333444556677778888999999999999999999999999999999999999999 7788899999999
Q ss_pred HHHHHHHHHhcccccccCCCccccccc
Q 011416 457 VIVTSILSVMLIPFETKGQELSDTVDF 483 (486)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (486)
+++++.+..+++. |++++..+|..+|
T Consensus 486 ~~~~gi~~T~l~p-Etk~~~leei~~e 511 (538)
T KOG0252|consen 486 CMLLGILFTLLIP-ETKGKSLEEISNE 511 (538)
T ss_pred HHHHhHheeEEee-cccccCHHHhcCh
Confidence 9999888877776 9999988876544
No 54
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1.4e-32 Score=262.10 Aligned_cols=373 Identities=12% Similarity=0.044 Sum_probs=267.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 011416 21 KYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVT 100 (486)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~ 100 (486)
+.....+..+.+.++...+.+...++..|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+..++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 44555666777778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhh---hcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-C-
Q 011416 101 AGAGLLS---SFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP-R- 174 (486)
Q Consensus 101 ~~~~~~~---~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~-~- 174 (486)
+++++++ .+++|++.++++|+++|+|.|.. +...+++.|+.++++|.+.+++.+...++|..+++.++..+.. .
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999875 57899999999999999999988 7777888888777777778999999999999999999876541 0
Q ss_pred ------------------------CCcHHHHHHhH-HHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCC
Q 011416 175 ------------------------LDWRWLLGLSS-IPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTK 228 (486)
Q Consensus 175 ------------------------~~w~~~f~~~~-~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (486)
.+||.+|+... +..++..+. ....||.+.. ++.++..
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~----~~~~~~~------------- 244 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD----NHSDAKQ------------- 244 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc----ccccccc-------------
Confidence 25666665433 333232222 2333432210 0000000
Q ss_pred CCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011416 229 LPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISE 308 (486)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (486)
.+.....+++++++..+...... ++.....+....+.+.
T Consensus 245 --------------------------------------~~~~~~~~~ll~~~~~~~~~l~~---~~~~~~~~~~~~~~~~ 283 (438)
T PRK10133 245 --------------------------------------GSFSASLSRLARIRHWRWAVLAQ---FCYVGAQTACWSYLIR 283 (438)
T ss_pred --------------------------------------cchhhhHHHHHhCchHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 00001233444444333322222 2222222222233332
Q ss_pred hccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 011416 309 LSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGL 388 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (486)
+. ..+..|.++.+++.......++.++++++++++.||+++|+++..+..+.++.+++....++. .....
T Consensus 284 ~l---------~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 353 (438)
T PRK10133 284 YA---------VEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIA 353 (438)
T ss_pred HH---------hhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHH
Confidence 21 012458999999999999999999999999999999999999888877766655554443333 33455
Q ss_pred HHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Q 011416 389 LFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSIL 463 (486)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~ 463 (486)
..+.+++.+..+|..++...+..|++ .+++.++.. ...+|+.++|.+.|.+.|..| ....+++...+.+....
T Consensus 354 ~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 354 LTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 67789999999999999999998754 678888876 455789999999999999887 45556544444443333
No 55
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.1e-33 Score=265.05 Aligned_cols=343 Identities=24% Similarity=0.312 Sum_probs=262.7
Q ss_pred HHHHHHHHhhHhhhhchhc-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc
Q 011416 31 GLGWVAEAMEIMILSFVGP-TVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 109 (486)
+++.++..++.....+..| .+.+++|.|..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4567788888888999999 899999999999999999999999999999999999999999999999999999666667
Q ss_pred CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHH
Q 011416 110 SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPS 188 (486)
Q Consensus 110 a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~ 188 (486)
++|++.+++.|++.|++.+.. +...+++.|++|+++|++++++.+.+.++|.+++|.+++.+.+..+||+.|++.+++.
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 788889999999999999888 7888999999999999999999999999999999999999998899999999999988
Q ss_pred HHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCC
Q 011416 189 FILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGK 267 (486)
Q Consensus 189 ~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (486)
++..++ ..+++++++....+++.++.+ +.+
T Consensus 162 ~~~~il~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~ 192 (352)
T PF07690_consen 162 LIAAILFILFLPEPPPPRERESPKESES-------------------------------------------------KKP 192 (352)
T ss_dssp HHHHHHHHCCC---STTTT--SSTTTT---------------------------------------------------HH
T ss_pred hhhhhhHhhhhhhccccccccccccccc-------------------------------------------------ccc
Confidence 887553 345555443221111111100 000
Q ss_pred Cchh-hhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCC-CchhHHHHHHHHhhHHHH
Q 011416 268 SGLS-LFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQ-DANLYIDEFITSLAEIPG 345 (486)
Q Consensus 268 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~ 345 (486)
.+.. .++.+++++..+ ......+...+.++....+.+.+. .+.++.+ ..+.+.......+..+++
T Consensus 193 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (352)
T PF07690_consen 193 KPLKPGFKSLFKNPVLW---ILLIAFFLFFFVFSGFSFFLPLYL----------QEVLGFSGPSQAGLLFSIFGIVGIIG 259 (352)
T ss_dssp HCCCH-CTHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHC----------CHHHHCCTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccchhh---hhhhhhhHHHHHHHHhhcccchhh----------hhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 0000 144444444332 122222233334444555555442 2334677 678888889999999999
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh---hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHH
Q 011416 346 LLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT---YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGA 422 (486)
Q Consensus 346 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 422 (486)
.++.+++.||+++++..........+..+.+.. ..+........++.+++.+...+...++..+..|++++|++.|+
T Consensus 260 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 339 (352)
T PF07690_consen 260 SLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGL 339 (352)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999877776666666665555544 33445566677778888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011416 423 ANAMGRIGGMVCP 435 (486)
Q Consensus 423 ~~~~~~~g~~~~~ 435 (486)
.+...++++.++|
T Consensus 340 ~~~~~~~~~~igP 352 (352)
T PF07690_consen 340 FNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC
Confidence 9999999999987
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=4.4e-32 Score=257.47 Aligned_cols=352 Identities=15% Similarity=0.063 Sum_probs=246.0
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 109 (486)
..+..+..........+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 33444555555566668899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHH
Q 011416 110 SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPS 188 (486)
Q Consensus 110 a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~ 188 (486)
++|++.+++.|+++|++.+.. +...+++.|++|+++|+++.++.+....+|..++|.+++.+.+..+||+.|++.+++.
T Consensus 88 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~ 167 (392)
T PRK10473 88 AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMG 167 (392)
T ss_pred hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHH
Confidence 999999999999999998887 6777899999999999999999999999999999999999888899999999988877
Q ss_pred HHHHH-HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCC
Q 011416 189 FILLA-FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGK 267 (486)
Q Consensus 189 ~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (486)
++..+ ...++||+++.. +++.+...
T Consensus 168 ~i~~~~~~~~~~~~~~~~--~~~~~~~~---------------------------------------------------- 193 (392)
T PRK10473 168 ILVLLLSLFILKETRPAR--APAASSKP---------------------------------------------------- 193 (392)
T ss_pred HHHHHHHHHHcCCCCCcc--cCCccchH----------------------------------------------------
Confidence 76544 345566653211 00000000
Q ss_pred CchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHH
Q 011416 268 SGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLL 347 (486)
Q Consensus 268 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 347 (486)
...++.++++............... ......+.+.+. .++.|.++.+.+......+++.+++.+
T Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~i~~~~ 257 (392)
T PRK10473 194 ---RENSESLLNRFFLSRLVITTLSVTV---ILTFVNTSPVLL----------MEQMGFSRGEYAIIMALTAGVSMTVSF 257 (392)
T ss_pred ---HHHHHHHhCHHHHHHHHHHHHHHHH---HHHHHHhCHHHH----------HHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0111222222222211111111111 111111122111 123467888888888889999999999
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHH
Q 011416 348 LAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMG 427 (486)
Q Consensus 348 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 427 (486)
+.+++.||+++|+.+..+..+..++.+.+....+.+.......+.+.+.+...+.... .+..|.++++ |......
T Consensus 258 ~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~---g~~~~~~ 332 (392)
T PRK10473 258 STPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVAMS--QALGPFSLRA---GVASSTL 332 (392)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHhccCcccc---cHHHHHH
Confidence 9999999999999998888877777766665444433333333333333333333322 3333443332 4444555
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHH
Q 011416 428 RIGGMVCPLVAVALVANCHQMTAVVLLVV 456 (486)
Q Consensus 428 ~~g~~~~~~i~g~l~~~~g~~~~~~~~~~ 456 (486)
.++..+++.+.+++.+..|+.......+.
T Consensus 333 ~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 333 GIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 67778888888888888777554444443
No 57
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=1.2e-32 Score=258.04 Aligned_cols=346 Identities=27% Similarity=0.361 Sum_probs=296.7
Q ss_pred HHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhh
Q 011416 29 YAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSS 108 (486)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 108 (486)
.+.+..+....+.....+..|.+.+++|.+..+.+++.+...++..+++++.|+++||+|||+.+..+..+..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34566777888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHH
Q 011416 109 FSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIP 187 (486)
Q Consensus 109 ~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~ 187 (486)
++++++.+++.|++.|++.+.. +...+++.|++|+++|++.+++.+...++|..+++.+++.+.+..+||+.+++.+++
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAIL 162 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999999999999999988 777889999999999999999999999999999999999999989999999998887
Q ss_pred HHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCC
Q 011416 188 SFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGK 267 (486)
Q Consensus 188 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (486)
.++..+...+++
T Consensus 163 ~~~~~~~~~~~~-------------------------------------------------------------------- 174 (352)
T cd06174 163 GLLLALLLLFLL-------------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHH--------------------------------------------------------------------
Confidence 777655543332
Q ss_pred CchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHH
Q 011416 268 SGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLL 347 (486)
Q Consensus 268 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 347 (486)
+.++......+...........+.+.+.+ +..+.+..+.+.......++.+++.+
T Consensus 175 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (352)
T cd06174 175 ---------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQ----------EVLGLSAAEAGLLLSLFGLGGILGAL 229 (352)
T ss_pred ---------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 01111223333333444444444444431 12267888999999999999999999
Q ss_pred HHHHHHHHhchhH-HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHH
Q 011416 348 LAAILVDTAGRKL-SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAM 426 (486)
Q Consensus 348 ~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 426 (486)
+.+++.||++||+ .+..+..+..++.+.+...++.+.......+.+++.+...+...++..|..|+++|++.+|+.+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T cd06174 230 LGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTF 309 (352)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 9999999999999 898898888888888877777777778888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhc
Q 011416 427 GRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVML 467 (486)
Q Consensus 427 ~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 467 (486)
.+++..++|.+.|.+.+..++...+.+.+++.+++.+..+.
T Consensus 310 ~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 310 GSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 99999999999999999889999999988888887766543
No 58
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=4.3e-32 Score=258.34 Aligned_cols=343 Identities=13% Similarity=0.122 Sum_probs=255.8
Q ss_pred HHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcC
Q 011416 31 GLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFS 110 (486)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a 110 (486)
.+...+..+....+.+..|.+.+++|.+.++.+++.+++.+++.++++++|+++||+|||+++..+..+.+++.+++.++
T Consensus 12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 33345555667788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHH
Q 011416 111 PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSF 189 (486)
Q Consensus 111 ~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~ 189 (486)
++++.+++.|+++|++.+.. +...+++.|+++++++++..+.......+|..++|.+++.+.+..+||+.|++.+++.+
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~ 171 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITL 171 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 99999999999999998877 55667889999999999999999999999999999999999999999999999888777
Q ss_pred HHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCc
Q 011416 190 ILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSG 269 (486)
Q Consensus 190 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (486)
+..+..++++|+++. ++.++.+
T Consensus 172 ~~~~~~~~~~~~~~~----~~~~~~~------------------------------------------------------ 193 (401)
T PRK11043 172 LLILPTLRLKPSKKA----RKQSQDA------------------------------------------------------ 193 (401)
T ss_pred HHHHHHHHcCCCCCc----cccchHH------------------------------------------------------
Confidence 765555555554321 0000000
Q ss_pred hhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHH
Q 011416 270 LSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLA 349 (486)
Q Consensus 270 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 349 (486)
..++++++++..+...... ......++....+.|.+. ++.|.++.+.++......++.+++.++.
T Consensus 194 -~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~-----------~~~g~s~~~~g~~~~~~~~~~~~g~~~~ 258 (401)
T PRK11043 194 -LTFKQLLKSKTYLGNVLIF---AACSAAFFAWLTGSPFIL-----------EQMGYSPADIGLSYVPQTIAFLVGGYGC 258 (401)
T ss_pred -HHHHHHHcChhHHHHHHHH---HHHHHHHHHHHHHhHHHH-----------HHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0233334333322222211 112222233333344332 3357888888888888888889999999
Q ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHh---h--hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHH
Q 011416 350 AILVDTAGRKLSITIMFTLSCLFLLPLV---T--YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAAN 424 (486)
Q Consensus 350 g~l~dr~g~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 424 (486)
+++.||+++|+.........+++.+.+. . .++.+.......+.+++.+..++.......+..| ++++++.|+.+
T Consensus 259 ~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~ 337 (401)
T PRK11043 259 RAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQN 337 (401)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHH
Confidence 9999999998876555444444333221 1 2233334444556677778888888887777776 56999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 011416 425 AMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 425 ~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
..+..++..++.+.|.+.+....
T Consensus 338 ~~~~~~~~~~~~~~g~l~~~~~~ 360 (401)
T PRK11043 338 TLQLGLCFLASLLVSALISTPLL 360 (401)
T ss_pred HHHHHHHHHHHHHHHHccCCChh
Confidence 99999999999999988775433
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=6.8e-32 Score=256.35 Aligned_cols=362 Identities=15% Similarity=0.034 Sum_probs=255.4
Q ss_pred HHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcC
Q 011416 31 GLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFS 110 (486)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a 110 (486)
.+..+...+......+.+|.+.++++.+.++.++..+++.+++.++++++|+++||+|||+++..+.++++++.+++.++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 34445567788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHH
Q 011416 111 PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSF 189 (486)
Q Consensus 111 ~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~ 189 (486)
+|++.++++|+++|++.+.. +...+++.|++++++|++++++...+..+|..+||.+++.+.++.|||+.|++.+++.+
T Consensus 102 ~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~ 181 (413)
T PRK15403 102 TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGL 181 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999998866 55567788999999999999999999999999999999999888999999999988877
Q ss_pred HHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCC
Q 011416 190 ILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKS 268 (486)
Q Consensus 190 ~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (486)
+..+. ++.+||+++. ++++.+.++.
T Consensus 182 i~~~~~~~~lp~~~~~---~~~~~~~~~~--------------------------------------------------- 207 (413)
T PRK15403 182 IAFVGLLLAMPETVKR---GAVPFSAKSV--------------------------------------------------- 207 (413)
T ss_pred HHHHHHHHhCCCCccc---cCCCCChHHH---------------------------------------------------
Confidence 76543 5557876431 1000000000
Q ss_pred chhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHH
Q 011416 269 GLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLL 348 (486)
Q Consensus 269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 348 (486)
...++.+++++..+. ...........++....+.|.+. .+..|.++.+.++.......+.+++..+
T Consensus 208 -~~~~~~ll~~~~~~~---~~l~~~~~~~~~~~~~~~~P~~l----------~~~~g~s~~~~gl~~~~~~~~~~i~~~l 273 (413)
T PRK15403 208 -LRDFRNVFRNRLFLT---GAATLSLSYIPMMSWVAVSPVIL----------IDAGGMTTSQFAWTQVPVFGAVIVANAI 273 (413)
T ss_pred -HHHHHHHHcCHHHHH---HHHHHHHHHHHHHHHHHhChHHH----------HHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 013444555443332 22222333333344444444443 1234788888888887788888888888
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHh-----hhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHH
Q 011416 349 AAILVDTAGRKLSITIMFTLSCLFLLPLV-----TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAA 423 (486)
Q Consensus 349 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 423 (486)
.+++.+|..+++.......+..++.+++. ..++.+......++.+++.+...|......-... +..+|++.++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~-~~~~G~a~a~~ 352 (413)
T PRK15403 274 VARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSN-NLPKGTVSASL 352 (413)
T ss_pred HHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccC-CCCCcHHHHHH
Confidence 88776554433332222222222222221 1222222345556667777777777664332211 22379999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHH
Q 011416 424 NAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSI 462 (486)
Q Consensus 424 ~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 462 (486)
+.....+..+++...+++.+. +....+...++++.+..
T Consensus 353 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 390 (413)
T PRK15403 353 NMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIV 390 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHH
Confidence 999999999999999988777 55555655555544433
No 60
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=4.3e-32 Score=266.51 Aligned_cols=392 Identities=30% Similarity=0.427 Sum_probs=305.6
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-h
Q 011416 53 SEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-H 131 (486)
Q Consensus 53 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~ 131 (486)
+.+..+.....+..+++++|..+|++++|.++||+|||++++.++++..++.++.++++|++.+++.|+++|++.+.. .
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 455667788899999999999999999999999999999999999999999999999999999999999999999888 7
Q ss_pred hhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCCh
Q 011416 132 VFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRT 211 (486)
Q Consensus 132 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 211 (486)
+...++.|++++++|+.+..+ ......+..+++++++++.. +||+.+++..+++++.++.+++.||+|+|+..+++.
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~ 267 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRI 267 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCch
Confidence 788899999999999999999 77777777788888887766 999999999999998877777778999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchh-hHHHHHHHHH
Q 011416 212 AEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSK-LARTTILLWL 290 (486)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~ 290 (486)
+++.+.+++..+.|.......+...... ....+......+...+.++++.+ .++..+...+
T Consensus 268 ~~a~~~l~~~a~~n~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 329 (521)
T KOG0255|consen 268 DEAIKILKKIAKLNGRKLSVKELLRLEL------------------LLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLF 329 (521)
T ss_pred HHHHHHHHHHHhhcCCCCCcHHHHHHHH------------------HhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHH
Confidence 9999998888776633222211111100 00000011111112355556554 6677777778
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHH
Q 011416 291 LLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSC 370 (486)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 370 (486)
.++.....+++.......+. .+........+..........+...|+.|||.....+..+..
T Consensus 330 ~~~~~~~~y~gl~~~~~~lg------------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~ 391 (521)
T KOG0255|consen 330 IWFVFSLVYYGLSLNVSGLG------------------GNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAG 391 (521)
T ss_pred HHHHHhHHHHhhhhhhhhcC------------------chHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 88888888888877666433 344555666666888888888999999999999999999999
Q ss_pred HHHHHHhhhchh---HHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011416 371 LFLLPLVTYQSN---ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 371 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
++++...+.... +...+...+..++.+..+...+.+..|.+|+..|..+.+..+....++++++|.+...... ...
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~ 470 (521)
T KOG0255|consen 392 IGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFP 470 (521)
T ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcc
Confidence 988888774332 2456666666677777777889999999999999999999999999999999998754444 333
Q ss_pred chHHHHHHHHHHHHHHHHhcccccccCCCcccccccc
Q 011416 448 MTAVVLLVVVIVTSILSVMLIPFETKGQELSDTVDFT 484 (486)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (486)
...+..++....+.+.+...+.||++.+++.+..++.
T Consensus 471 ~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~ 507 (521)
T KOG0255|consen 471 LLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDA 507 (521)
T ss_pred cchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHH
Confidence 3333445777777777777888899988876665444
No 61
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-32 Score=258.62 Aligned_cols=365 Identities=20% Similarity=0.281 Sum_probs=281.0
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC--CHHHHHHHHHHHHhccCc
Q 011416 52 KSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP--NYITLITLRCLVGVGLGS 129 (486)
Q Consensus 52 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~~ 129 (486)
..++++|..|.|++.++++.|+.+++++.|+++||+|.|+++..+.++.++++++..++. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 457899999999999999999999999999999999999999999999999999998874 566889999999999999
Q ss_pred c-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHhHHHHHHHHHHhh-ccCCCchhhh
Q 011416 130 G-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-LDWRWLLGLSSIPSFILLAFLG-FQPESPRYLC 206 (486)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~-~~w~~~f~~~~~~~~~~~~~~~-~~~e~~~~~~ 206 (486)
. |....+...|.|++||++..++..++..+|.+++.++++.+.+. .||+.+|++.++.+++..++++ +..|+|..+
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h- 223 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH- 223 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC-
Confidence 8 77888999999999999999999999999999999999999998 9999999999999999866654 456666531
Q ss_pred hcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHH
Q 011416 207 LKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTI 286 (486)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 286 (486)
+.-.+++ ++.+.+...++ +.++....+++++++++ .++
T Consensus 224 -~~is~~E---l~~I~~~k~~~-----------------------------------~~~~~~~vP~~~i~ts~---~vw 261 (466)
T KOG2532|consen 224 -PNISEKE---LKYIEKGKSEA-----------------------------------HVKKKPPVPYKAILTSP---PVW 261 (466)
T ss_pred -CCCCHHH---HHHHHhccccc-----------------------------------ccCCCCCCCHHHHHcCH---HHH
Confidence 1111111 22222111100 00011334888888875 456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhch--------
Q 011416 287 LLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR-------- 358 (486)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~-------- 358 (486)
.+++..++....++.+..+.|.+.+ +.++++..+.|+..++..+...+..+++|.++||+.+
T Consensus 262 ai~~~~f~~~~~~~~l~~y~PtY~~----------~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~ 331 (466)
T KOG2532|consen 262 AIWISAFGGNWGFYLLLTYLPTYLK----------EVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTV 331 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHH----------HHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhH
Confidence 6677777778888888888887763 4568999999999999999999999999999998744
Q ss_pred -hHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHH
Q 011416 359 -KLSITIMFTLSCLFLLPLVTYQS-NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPL 436 (486)
Q Consensus 359 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~ 436 (486)
|..-.++....+++++.+.+.+. .....+..+....+..+..............+++.+..+|+.+.+..+.++++|.
T Consensus 332 rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~ 411 (466)
T KOG2532|consen 332 RKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPL 411 (466)
T ss_pred HHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456777777777777776442 2222233333333444444333333333324577999999999999999999999
Q ss_pred HHHHHHH---hhccchHHHHHHHHHHHHHHHHhccc
Q 011416 437 VAVALVA---NCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 437 i~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
+.|.+.. ...|...|++.+++.+++.++..++-
T Consensus 412 ~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 412 LVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred heeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 9999883 34688899999999988887666653
No 62
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=4.2e-32 Score=258.55 Aligned_cols=356 Identities=20% Similarity=0.229 Sum_probs=255.7
Q ss_pred HHHHhhHhhhhchhchhhhhcC--CCcchhHHHHHH-----HHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhh
Q 011416 35 VAEAMEIMILSFVGPTVKSEWN--LSSTEESLITTS-----VFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLS 107 (486)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~--~s~~~~g~~~s~-----~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 107 (486)
+.+++++..++...+.+.+++. .++++.+.+.+. .+++..+++++.|+++||+|||+++..+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 5677888888888888888764 455666665543 333445789999999999999999999999999999999
Q ss_pred hcCCCHH--------HHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh------
Q 011416 108 SFSPNYI--------TLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM------ 172 (486)
Q Consensus 108 ~~a~~~~--------~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~------ 172 (486)
+++++++ .+++.|+++|++.+.. +...+++.|++++++|++..++...+..+|.++++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999875 4788999999999888 777889999999999999999999999999999998877653
Q ss_pred --cCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCcc
Q 011416 173 --PRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPE 250 (486)
Q Consensus 173 --~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (486)
+..+||+.|++.+++.++..+.....||++++...+++.++
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 205 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHKK------------------------------------- 205 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcccc-------------------------------------
Confidence 35799999998877766655555556665432110000000
Q ss_pred chhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCch
Q 011416 251 LVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDAN 330 (486)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (486)
...+.++.++++. +.++......+.....++....+.+.+.+ +..+.++.+
T Consensus 206 ------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~g~~~~~ 256 (394)
T TIGR00883 206 ------------------KRGPIRETLTKHR-KPFLLGLGLVIATTTTFYLITTYLPTYLT----------QTLGLSANS 256 (394)
T ss_pred ------------------ccCCHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhcCCChhH
Confidence 0002233333322 22333333344444444555555554431 334678888
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH-HHH-hh--hchhHHHHHHHHHHHHhhhhhhhhHhhh
Q 011416 331 LYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFL-LPL-VT--YQSNILTTGLLFGARMCVMGAFTVSLIY 406 (486)
Q Consensus 331 ~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (486)
.+.......+..+++.++.|++.||++||+.+.....+..+.. ..+ .. ..+.+......++.+++.+...+...+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 336 (394)
T TIGR00883 257 ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSF 336 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 8888888999999999999999999999997765544443322 121 12 2344445555666777777888889999
Q ss_pred ccccccccchhhHhHHHH-HHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHH
Q 011416 407 AAEIYPTSVRSTGAGAAN-AMGRIGGMVCPLVAVALVANCH-QMTAVVLLVV 456 (486)
Q Consensus 407 ~~~~~~~~~~~~~~g~~~-~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~ 456 (486)
..|.+|++.|+++.++.. ....+|..++|.+.|++.|+.| +...++....
T Consensus 337 ~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 337 LPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred HHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 999999999999999854 4456888899999999999988 5444444443
No 63
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.3e-39 Score=315.02 Aligned_cols=415 Identities=29% Similarity=0.450 Sum_probs=302.3
Q ss_pred HHHHHHHHhhHhhhhchhchhh--hhcCCC---------cchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 011416 31 GLGWVAEAMEIMILSFVGPTVK--SEWNLS---------STEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALV 99 (486)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~s---------~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~ 99 (486)
.++.+..+++....+...+... .+++.+ ..+.+++.+...+|..++++++|.++||+|||+.+..+.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3445777777777766655544 222222 23568999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcCC---CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 011416 100 TAGAGLLSSFSP---NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL 175 (486)
Q Consensus 100 ~~~~~~~~~~a~---~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~ 175 (486)
..++.++.++++ |++.+.++|+++|++.|.. +....++.|..|+++|++..++.+.+..+|.+++..++..+.+..
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 9999999999999999988 778889999999999999999999999999999988876664433
Q ss_pred ---CcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccch
Q 011416 176 ---DWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELV 252 (486)
Q Consensus 176 ---~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (486)
+||..+.+.++++++..+...++||+|+|+..+++.+++++.+++.+..+..+.+.++... +
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~-------~-------- 230 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKA-------E-------- 230 (451)
T ss_pred ccccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccc-------c--------
Confidence 4999999999999888888889999999999999888888777664332111110000000 0
Q ss_pred hhcccCCCCCcccCCCchhhhHhhhchhh-HHHHHHHHHHHHHH-HHHHHHHHHHHhhhccccccCCCCccccCCCCCch
Q 011416 253 HLLSSNGGNKTTEGKSGLSLFLMLFSSKL-ARTTILLWLLLFGN-SFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDAN 330 (486)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (486)
.++.++.+ ..++++++++. +++....+...... ....+....+.+.+. +..+.+..
T Consensus 231 -------~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~-----------~~~~~~~~- 288 (451)
T PF00083_consen 231 -------KKESQESK---ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIF-----------ENAGISNS- 288 (451)
T ss_pred -------cccccccc---eeeeeccccccccccccccccccccccccccccccccccccc-----------cccccccc-
Confidence 00000000 35566665543 33333333333322 222233333444333 22334443
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh--h---hch----hHHHHHHHHHH-HHhhhhhh
Q 011416 331 LYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV--T---YQS----NILTTGLLFGA-RMCVMGAF 400 (486)
Q Consensus 331 ~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~--~---~~~----~~~~~~~~~~~-~~~~~~~~ 400 (486)
........+...++.+++.++.||+|||+.+..+..+++++.+.+. . ..+ .........+. .....+..
T Consensus 289 -~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~ 367 (451)
T PF00083_consen 289 -FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWG 367 (451)
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccc
Confidence 2334455667778888888999999999999988888887777664 1 121 12222222222 22333566
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCCCcccc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELSDT 480 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (486)
+..+.+..|.+|++.|+++.|+....++++++++|.+...+.+..+....+.++++++++..++.+.+.||+|+++.+|.
T Consensus 368 ~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei 447 (451)
T PF00083_consen 368 PLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEI 447 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHH
Confidence 77889999999999999999999999999999999999888888776778888888889888999999999999999988
Q ss_pred ccc
Q 011416 481 VDF 483 (486)
Q Consensus 481 ~~~ 483 (486)
+++
T Consensus 448 ~~~ 450 (451)
T PF00083_consen 448 QEM 450 (451)
T ss_pred Hhh
Confidence 764
No 64
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.5e-31 Score=253.07 Aligned_cols=358 Identities=12% Similarity=0.034 Sum_probs=255.5
Q ss_pred HHHHhhHhhhhchhc-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCH
Q 011416 35 VAEAMEIMILSFVGP-TVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNY 113 (486)
Q Consensus 35 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~ 113 (486)
++.........+.++ .+++++|+|..+.|++.+...+...+.+++.|+++||+|||+++..+.++.+++.+++.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~ 99 (400)
T PRK11646 20 MLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEP 99 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccH
Confidence 333333344444444 5678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHH
Q 011416 114 ITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL 192 (486)
Q Consensus 114 ~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~ 192 (486)
+.+++.|+++|++.+.. +...+++.|++|+++|++++|+.....++|..+||.+++.+. ..+||+.|++.++..++..
T Consensus 100 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~ 178 (400)
T PRK11646 100 WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAA 178 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 99999999999998877 777788999999999999999999999999999999999998 6899999999887766653
Q ss_pred H-HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchh
Q 011416 193 A-FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLS 271 (486)
Q Consensus 193 ~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (486)
+ ..++.||.+. ++..++.+ .
T Consensus 179 i~~~~~~~~~~~----~~~~~~~~-------------------------------------------------------~ 199 (400)
T PRK11646 179 AFNAWLLPAYKL----STVRTPVR-------------------------------------------------------E 199 (400)
T ss_pred HHHHHhCCcccc----cccchhhH-------------------------------------------------------H
Confidence 3 3344454211 00000000 0
Q ss_pred hhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHH
Q 011416 272 LFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAI 351 (486)
Q Consensus 272 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~ 351 (486)
.++.+++++........ .+...........+.|.+. ++.+.++.+.+.......+....+....++
T Consensus 200 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~-----------~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 265 (400)
T PRK11646 200 GMTRVLRDKRFVTYVLT---LTGYYMLAVQVMLMLPIMV-----------NDIAGSPSAVKWMYAIEACLSLTLLYPIAR 265 (400)
T ss_pred HHHHHHcCchHHHHHHH---HHHHHHHHHHHHHhhhhhH-----------HhhcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 23334433332222111 1111111122223344332 223345677777777777766655555565
Q ss_pred HHH-HhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHH
Q 011416 352 LVD-TAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIG 430 (486)
Q Consensus 352 l~d-r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 430 (486)
+.| |++.++.+..+..+.+++...+...++.+.......+.+.+.+...|...++..+..|++++|+++|+.+...++|
T Consensus 266 ~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 345 (400)
T PRK11646 266 WSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALG 345 (400)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHH
Confidence 555 5666666667777777776666555555555555566677777777888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc----cchHHHHHHHHHHHHHHHHh
Q 011416 431 GMVCPLVAVALVANCH----QMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 431 ~~~~~~i~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~ 466 (486)
..++|.+.|.+.|+.+ ....+...+.+.+++.+...
T Consensus 346 ~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 346 GAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999853 23445554555555544433
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=5.5e-31 Score=254.77 Aligned_cols=372 Identities=16% Similarity=0.117 Sum_probs=265.8
Q ss_pred HHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh-----cchHH-HHHHHHHHHH
Q 011416 29 YAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY-----GRRMG-FLGEALVTAG 102 (486)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----G~r~~-~~~~~~~~~~ 102 (486)
.+++.++..+......+..+|.+.++.|.|.+++|.+ +.....+ ++.+++|+++||+ |||+. +..+.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 3445556777777788888999999999999999997 4444444 5889999999999 99885 6678888878
Q ss_pred hhhhhhcC---CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc
Q 011416 103 AGLLSSFS---PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP-RLDW 177 (486)
Q Consensus 103 ~~~~~~~a---~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~-~~~w 177 (486)
+..++++. ++++.+.+.+++.|++.+.. ++..+++.|++|+++|+++.++...+..+|.++++.++..+.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 87777665 47888999999999998887 7777999999999999999999999999999999999999988 5799
Q ss_pred HHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhccc
Q 011416 178 RWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSS 257 (486)
Q Consensus 178 ~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (486)
|..|++.+++.++..+..++.||+++.. +++++.++.
T Consensus 174 r~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~~~~~~~~---------------------------------------- 210 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLLAPEPTDTI---PVPKTLEQA---------------------------------------- 210 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccc---ccccchhhh----------------------------------------
Confidence 9999999888777666555677754311 000000000
Q ss_pred CCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHH-H
Q 011416 258 NGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDE-F 336 (486)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 336 (486)
...+++++++++..+......+.+. ...+....+.+.+. .+..|++..+.+... .
T Consensus 211 -----------~~~~l~~~~~~~~~~~~ll~~~l~~---~~~~~~~~~~~~~l----------~~~~G~s~~~~g~~~~~ 266 (491)
T PRK11010 211 -----------VVAPLRDFFGRNNAWLILLLIVLYK---LGDAFAMSLTTTFL----------IRGVGFDAGEVGLVNKT 266 (491)
T ss_pred -----------HHHHHHHHHcCcCHHHHHHHHHHHH---HHHHHHHHHHHHHH----------HHhcCCCHHHHHHHHHH
Confidence 0013444554443332222222221 11112222222221 123578999998887 4
Q ss_pred HHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH---hhh-chhHHHHHHHHHHHHhhhhhhhhHhhhcccccc
Q 011416 337 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPL---VTY-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYP 412 (486)
Q Consensus 337 ~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (486)
...++.+++.+++|+++||+++|+.+.++.++.++..+.+ ... ++.+......++..++.+...+...+...+..+
T Consensus 267 ~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~ 346 (491)
T PRK11010 267 LGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCN 346 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5567999999999999999999887776655544433222 222 233333334444444445555667788888888
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 413 TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 413 ~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
++.+++.+|+.+...++|..+++.+.|++.|..||...|.+.+++.+++.+.....+
T Consensus 347 ~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 347 KSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999998888888888888777666553
No 66
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=4.3e-31 Score=250.12 Aligned_cols=361 Identities=11% Similarity=0.101 Sum_probs=241.6
Q ss_pred HHHHHHhhHhhhhchhch-hhhhcCCCcchhHHHHHHHHH-HHHHHHHHHhhhhhhhcchHHH-HHHHHHHHHhhhhhhc
Q 011416 33 GWVAEAMEIMILSFVGPT-VKSEWNLSSTEESLITTSVFA-GLVVGAYAWGLVADNYGRRMGF-LGEALVTAGAGLLSSF 109 (486)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~G~r~~~-~~~~~~~~~~~~~~~~ 109 (486)
..++..+......+.+|. +.+++|+|.+++|++.+...+ ++.++.++.|+ .||+||||.+ ..+.++.+++..+.++
T Consensus 23 ~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~ 101 (393)
T PRK15011 23 VAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW 101 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 355555655556666655 678999999999999877655 55555555555 9999999875 4566666788888889
Q ss_pred CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCch--hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHH
Q 011416 110 SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNR--GMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSI 186 (486)
Q Consensus 110 a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~ 186 (486)
+++++.+++.+.+.|...+.. +...+++.++.++++| +...++.+.+.++|.+++|++++.+.+++|||..|++.++
T Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~ 181 (393)
T PRK15011 102 NRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAV 181 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHH
Confidence 999998876655544433444 6666777787776655 3456888999999999999999999999999999999888
Q ss_pred HHHHHHH-HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCccc
Q 011416 187 PSFILLA-FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTE 265 (486)
Q Consensus 187 ~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (486)
..++..+ .+.++||+++.. ++.++ ..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~---~~~~~------------~~~------------------------------------- 209 (393)
T PRK15011 182 AFIVCGVMVWLFLPSMRKEL---PLATG------------TLE------------------------------------- 209 (393)
T ss_pred HHHHHHHHHHhhcCccCCCC---ccccc------------ccc-------------------------------------
Confidence 7776544 455567654210 00000 000
Q ss_pred CCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHH
Q 011416 266 GKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPG 345 (486)
Q Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 345 (486)
..+. +++..... ..........++....+.|.+. .++.+.++.+.+.......++.+++
T Consensus 210 ------~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~l----------~~~~~~~~~~~g~~~~~~~~~~i~~ 268 (393)
T PRK15011 210 ------APRR--NRRDTLLL---FVICTLMWGTNSLYIINMPLFI----------INELHLPEKLAGVMMGTAAGLEIPT 268 (393)
T ss_pred ------cccc--ccccHHHH---HHHHHHHHHHHHHHHHHHHHHH----------HHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000 00100111 1111111122222223334322 1234678788888877777888889
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHH
Q 011416 346 LLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANA 425 (486)
Q Consensus 346 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 425 (486)
.++.|+++||++||+.+..+.....+....+...++.+......++.+++.+...+....+..|..|+ ++++++++.+.
T Consensus 269 ~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~ 347 (393)
T PRK15011 269 MLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTN 347 (393)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHH
Confidence 99999999999999887766655554444433344444444444445555555556666777888885 49999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 426 MGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 426 ~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
..++|..++|.+.|.+.|..|+...+.+.+++.+++.+..+..
T Consensus 348 ~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 348 TSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999898888887777777766665544
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=3.9e-31 Score=249.37 Aligned_cols=360 Identities=12% Similarity=-0.038 Sum_probs=269.8
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHH----HHHHHHHHHhhh
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGF----LGEALVTAGAGL 105 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~----~~~~~~~~~~~~ 105 (486)
+.+.++..+.......|.+|.+.+++|.|.+++|++.+++.+...++++++|+++||+|||... ..+..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 4456777777778888999999999999999999999999999999999999999999985433 222222222 2
Q ss_pred hhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHh
Q 011416 106 LSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLS 184 (486)
Q Consensus 106 ~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~ 184 (486)
.+..+++++.+++.|+++|.+.+.. +...++..++ +++|+++.|......++|.+++|++++.+.+.+|||..|++.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 4456789999999999999888777 6666666554 477899999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcc
Q 011416 185 SIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTT 264 (486)
Q Consensus 185 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (486)
++..++.++.. .++|+++. +++.++.+
T Consensus 165 ~~~~~~~~~~~-~~~~~~~~---~~~~~~~~------------------------------------------------- 191 (382)
T TIGR00902 165 TAGLAFMLIGF-LIKPTIPP---KDAIPEDE------------------------------------------------- 191 (382)
T ss_pred HHHHHHHHHHH-HcCCCCCC---Cccccccc-------------------------------------------------
Confidence 65533333333 33333210 00000000
Q ss_pred cCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHH
Q 011416 265 EGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIP 344 (486)
Q Consensus 265 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 344 (486)
.+.....++++|++..+.......+ ..........+.+.+. ++.|.++...+.......++.++
T Consensus 192 --~~~~~~~~~~l~~~~~~~~l~~~~l---~~~~~~~~~~~~~~~l-----------~~~g~s~~~~g~l~~~~~~~~i~ 255 (382)
T TIGR00902 192 --SQGDSAFIALLKNPMNLRFLAAVCL---IQGAHAAYYGFSAIYW-----------QAAGISASATGLLWGIGVLAEII 255 (382)
T ss_pred --cccchhHHHHHcChHHHHHHHHHHH---HHHHHHHHHHHHHHHH-----------HHCCCCHhHHHHHHHHHHHHHHH
Confidence 0000134455555443333332222 2233333333444333 34578999999999999999999
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHH
Q 011416 345 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAAN 424 (486)
Q Consensus 345 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 424 (486)
+..+.+++.||+++|+.+.++.+...+....+...++.+.......+.++..+...+....++.+. |++++++++++++
T Consensus 256 ~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~ 334 (382)
T TIGR00902 256 IFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYN 334 (382)
T ss_pred HHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHH
Confidence 999999999999999999999999999988888888888888888999999999999999999988 9999999999987
Q ss_pred H-HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q 011416 425 A-MGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILS 464 (486)
Q Consensus 425 ~-~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 464 (486)
. ...+|..++|.+.|++.|+.|. ..++..+++.+++.++
T Consensus 335 ~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 335 ALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 5 5679999999999999999985 6677777777655443
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=8.2e-31 Score=247.84 Aligned_cols=359 Identities=12% Similarity=0.054 Sum_probs=261.5
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhh
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLL 106 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 106 (486)
+.++++.++..++.....++..|.+++++|+|..+.|++.+.+++++.+++++.|++.||+|||+++..+.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44566677778888888899999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhc---CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Q 011416 107 SSF---SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-------- 174 (486)
Q Consensus 107 ~~~---a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~-------- 174 (486)
+.. .+|++.+++.|++.|+|.|.. +...+++.+..|+++|++.+++.+...++|..+++.++..+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 644 468999999999999999998 77788999999999999999999999999999999998877422
Q ss_pred ------------------CCcHHHHHHhHHHHHHHHHHhhc--cCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchh
Q 011416 175 ------------------LDWRWLLGLSSIPSFILLAFLGF--QPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKL 234 (486)
Q Consensus 175 ------------------~~w~~~f~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (486)
.+||++|++.+++.++..+...+ .||.++ ++.++ .+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~~~~-~~------------------ 220 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----SDAKQ-IS------------------ 220 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----ccccc-cc------------------
Confidence 36999999888877665444332 232111 00000 00
Q ss_pred hhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 011416 235 VARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDT 314 (486)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (486)
.....+++++++..+..... .+...........+.+.+...
T Consensus 221 ----------------------------------~~~~~~~~~~~~~~~~~~l~---~f~yvg~e~~~~s~l~~y~~~-- 261 (410)
T TIGR00885 221 ----------------------------------FSASLSRLARIRHYREGVIA---QFFYVGVQIMCWTFIIQYAVR-- 261 (410)
T ss_pred ----------------------------------chhhHHHHHhChhHHHHHHH---HHHHHHHHHHHHHHHHHHHhh--
Confidence 00022233444333332222 222223333333444443311
Q ss_pred cCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHH
Q 011416 315 RCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARM 394 (486)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (486)
...+.+...++...........+|+++++++.||+++|+.+.+...+.++..++....++.. ....+.+.++
T Consensus 262 -------~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~gl 333 (410)
T TIGR00885 262 -------LIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSA 333 (410)
T ss_pred -------ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHH
Confidence 01123334444455566677899999999999999999998888888888777777655443 3566667788
Q ss_pred hhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhh------ccchHHHHHHHHH
Q 011416 395 CVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC------HQMTAVVLLVVVI 458 (486)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~------g~~~~~~~~~~~~ 458 (486)
+.+..+|..++...+..+++.+..+.++...+ +|+.+.|.+.|.+.|.. +....|++-..+.
T Consensus 334 f~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~ 401 (410)
T TIGR00885 334 FMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCF 401 (410)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHHH
Confidence 88899999999999999877655555555544 99999999999999964 3445555443333
No 69
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=3.1e-31 Score=250.50 Aligned_cols=364 Identities=13% Similarity=0.070 Sum_probs=262.0
Q ss_pred HHHHHHHhhHhhhhchhc-hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcC
Q 011416 32 LGWVAEAMEIMILSFVGP-TVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFS 110 (486)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a 110 (486)
+..++.........+.+| .+.+++|++..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++.+++
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 344555555555555554 5667899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHH
Q 011416 111 PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSF 189 (486)
Q Consensus 111 ~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~ 189 (486)
+|++.+++.|++.|.+.+.. +...++..|..++++|++++++.....++|.+++|.+++.+.+ .+|+.+|++.+++.+
T Consensus 94 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~ 172 (395)
T PRK10054 94 NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSA 172 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHH
Confidence 99999999999988877766 6677888999999999999999999999999999999998875 799999998887776
Q ss_pred HHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCC
Q 011416 190 ILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKS 268 (486)
Q Consensus 190 ~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (486)
+..+. .+++||+++.. +++++ +.
T Consensus 173 i~~i~~~~~~~~~~~~~---~~~~~--~~--------------------------------------------------- 196 (395)
T PRK10054 173 FPLVFIQIWVQRSEKAI---ATETG--SV--------------------------------------------------- 196 (395)
T ss_pred HHHHHHHHHHhcccccc---ccchh--hh---------------------------------------------------
Confidence 65433 44455543210 00000 00
Q ss_pred chhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHH
Q 011416 269 GLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLL 348 (486)
Q Consensus 269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 348 (486)
...++.++++..+..... .+...+.+.....+.+.+.. ..++.+.+....+.......+........
T Consensus 197 --~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 263 (395)
T PRK10054 197 --WSPSVLLQDKALLWFTCS---GFLASFVSGAFASCISQYVM--------VVADSDFAEKVVAVVLPVNAAMVVSLQYS 263 (395)
T ss_pred --hhhhhhccCceehHHHHH---HHHHHHHHHHhhhhHHHHHH--------HhcccchHHHHHHHHHHhhhhheeeehhH
Confidence 011222333322222221 11111111111111121110 00123455556667777777777777788
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-chhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHH
Q 011416 349 AAILVDTAGRKLSITIMFTLSCLFLLPLVTY-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMG 427 (486)
Q Consensus 349 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 427 (486)
.|++.||.++|+.+..+..+.+++...+... ++.+...+...+.+++.....|.....+.+..|++.++++++..+ ..
T Consensus 264 ~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~ 342 (395)
T PRK10054 264 VGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LG 342 (395)
T ss_pred HHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HH
Confidence 8999999999999888887777777666543 444445566677777777777888889999999999999988755 67
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHh
Q 011416 428 RIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 428 ~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 466 (486)
++|..+||.+.|.+.|+.|+...+.+.+++..++.++..
T Consensus 343 ~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 343 WLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 799999999999999999888777776666655555544
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=1.6e-30 Score=246.97 Aligned_cols=350 Identities=12% Similarity=0.054 Sum_probs=254.4
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHH
Q 011416 23 QCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAG 102 (486)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~ 102 (486)
.++.+.+..+......+......+.+|.+.+++|.|+.+.+++.+++.+++.++++++|+++||+|||+++..+..+.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 34455555556666667777888889999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 011416 103 AGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLL 181 (486)
Q Consensus 103 ~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f 181 (486)
+.+++.+++|++.+++.|++.|++.+.. +....+..|.+++++++++.++...+..+|..++|.+++.+.+..|||+.|
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f 165 (394)
T PRK11652 86 GTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACY 165 (394)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 9999999999999999999999998877 556677889999999999999999999999999999999999889999999
Q ss_pred HHhHHHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCC
Q 011416 182 GLSSIPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGG 260 (486)
Q Consensus 182 ~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (486)
++.++..++.. +..++.||+++.. +++++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------------------------------------------- 197 (394)
T PRK11652 166 LFLLLLGAGVTFSMARWMPETRPAD---ARRTRVL--------------------------------------------- 197 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCccCccc---cchhHHH---------------------------------------------
Confidence 99887766543 3455667764311 0000000
Q ss_pred CCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHh
Q 011416 261 NKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSL 340 (486)
Q Consensus 261 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 340 (486)
..++..++++..+......+..+.....+. .+.+.+. .+..+.++.+.++......+
T Consensus 198 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----------~~~~g~~~~~~~~~~~~~~~ 254 (394)
T PRK11652 198 ----------ASYRTLLSNRRFNCYLLMLIGTLAGIAVFE---ACSGVLM----------GAVLGLSSMTVSILFILPIP 254 (394)
T ss_pred ----------HHHHHHHcChHHHHHHHHHHHHHHHHHHHH---HhChHHH----------HHHcCCCHHHHHHHHHHHHH
Confidence 033444444443333322222221111111 1111111 11246788888888888888
Q ss_pred hHHHHHHHHHHHHHHhchhHHHHHHHHHHH-HHHHHHhh--hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchh
Q 011416 341 AEIPGLLLAAILVDTAGRKLSITIMFTLSC-LFLLPLVT--YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRS 417 (486)
Q Consensus 341 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (486)
+.+++..+.+++.||.+++........... +....... ..+.+.......+.+++.+...+...+...|..| ++++
T Consensus 255 ~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g 333 (394)
T PRK11652 255 AAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAG 333 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccch
Confidence 888899999999999884433322222222 22111111 1234445556677777888888989988888887 5689
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 418 TGAGAANAMGRIGGMVCPLVAVALVAN 444 (486)
Q Consensus 418 ~~~g~~~~~~~~g~~~~~~i~g~l~~~ 444 (486)
++.++.+....+|+.+++.+.+.+.+.
T Consensus 334 ~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 334 TAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 999999999999999999998877554
No 71
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.3e-34 Score=252.82 Aligned_cols=369 Identities=18% Similarity=0.177 Sum_probs=258.4
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
..+..++.+.++++...+++.|++.+....+.+++.+|+++++.|++.+.+.+.+.+++|++|+++|||.||+++.+|..
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~ 106 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF 106 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH
Confidence 34556778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 011416 99 VTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD- 176 (486)
Q Consensus 99 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~- 176 (486)
+|.++.++++++..||+++++|.+.|+|.+.. +.++++++|.++..+|++++++++.+..+|..+|.+.+..+.+..+
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 99999999999999999999999999999999 8899999999999999999999999999999999999999887666
Q ss_pred cHHHHHHhHHHHHHHHHHhh-ccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhc
Q 011416 177 WRWLLGLSSIPSFILLAFLG-FQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLL 255 (486)
Q Consensus 177 w~~~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (486)
||+.|+..+++++++.++.+ +.+|+++. ..++....
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rg-----a~~~~~~~-------------------------------------- 223 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERG-----ARDEVDGE-------------------------------------- 223 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcccc-----cccccccC--------------------------------------
Confidence 99999999999999866544 44554321 11100000
Q ss_pred ccCCCCCcccCCCchhhhHhhhchh-hHHHHHHHHHHHH-HHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHH
Q 011416 256 SSNGGNKTTEGKSGLSLFLMLFSSK-LARTTILLWLLLF-GNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYI 333 (486)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (486)
.....+.....++.+.+.+.+ .....+......+ +..+.++......-.+ +-.+.+.....+
T Consensus 224 ----~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~------------~~~~~~~~~~~i 287 (493)
T KOG1330|consen 224 ----NKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSY------------ELIGFDHNATLI 287 (493)
T ss_pred ----CcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHH------------HHhCCccccchh
Confidence 000011112222333333322 1112222222222 2333333322221111 112355556667
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhchh----HHHH-------HHHHHHHHHHHHHhh-hchhHHHHHHHHHHHHhh-hhhh
Q 011416 334 DEFITSLAEIPGLLLAAILVDTAGRK----LSIT-------IMFTLSCLFLLPLVT-YQSNILTTGLLFGARMCV-MGAF 400 (486)
Q Consensus 334 ~~~~~~i~~~~~~~~~g~l~dr~g~~----~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 400 (486)
+..++..++.+|.+++|.++||+.|+ .... .+..+.+..+.+... ..........+++.+... ....
T Consensus 288 fg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~ 367 (493)
T KOG1330|consen 288 FGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNW 367 (493)
T ss_pred hhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccc
Confidence 78888899999999999999995321 1111 111222222222222 122222222233333332 3334
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHH-HHHHHHHHHHHHHHHhhc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGR-IGGMVCPLVAVALVANCH 446 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~~~~i~g~l~~~~g 446 (486)
+....+..|.+|++.|.+++++...+.. +|.+-+|.+.|.+.|+..
T Consensus 368 a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 368 ATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLR 414 (493)
T ss_pred ccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhh
Confidence 5566678889999999999999887776 566666769999998753
No 72
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-31 Score=252.82 Aligned_cols=384 Identities=15% Similarity=0.207 Sum_probs=277.1
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhh-chhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILS-FVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEA 97 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~ 97 (486)
..|..++++..++..++..+.++..++ ..+..+.+|.+....+.+.+.++++++|+++.+|+|.+.||++..+.+....
T Consensus 39 ~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~ 118 (495)
T KOG2533|consen 39 LRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG 118 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH
Confidence 344556677777777888888877776 3344577999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh----
Q 011416 98 LVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM---- 172 (486)
Q Consensus 98 ~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~---- 172 (486)
+++++-.++....+|++.+++.|++.|+.++.. |....+++.|+.++||++.+|++.+..++|.++|++++..+.
T Consensus 119 ~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 119 ILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 999999988888999999999999999999999 888889999999999999999999999999999999998863
Q ss_pred --cCCCcHHHHHHhHHHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCc
Q 011416 173 --PRLDWRWLLGLSSIPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPP 249 (486)
Q Consensus 173 --~~~~w~~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (486)
...|||+.|++.++++++.. +..+++|++|....-. +++|..-..++.++.+....
T Consensus 199 ~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl-~~~ek~~~~~~~~~~~~~~~-------------------- 257 (495)
T KOG2533|consen 199 SGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFL-TDEEKELVVERLRESPSGGI-------------------- 257 (495)
T ss_pred CCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcccc-chHHHHHHHHHHHhccCCCc--------------------
Confidence 45799999999999998874 5577789998632111 11111111122211111100
Q ss_pred cchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCc
Q 011416 250 ELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDA 329 (486)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (486)
.++. .++.+++....+.++...+++++.....++...|.|.+.+. ..+++..
T Consensus 258 ---------------~~~~---~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~----------~~~~s~~ 309 (495)
T KOG2533|consen 258 ---------------ENKF---KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKS----------NGGYSEL 309 (495)
T ss_pred ---------------cccc---CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHc----------CCCcChH
Confidence 0001 33334434444567777778888888888888888877632 2468899
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHH----hchhHHHHHHHHHHHHHH-HHHhhhchhHHHHHHHHHHHHhhhhhhhhHh
Q 011416 330 NLYIDEFITSLAEIPGLLLAAILVDT----AGRKLSITIMFTLSCLFL-LPLVTYQSNILTTGLLFGARMCVMGAFTVSL 404 (486)
Q Consensus 330 ~~~~~~~~~~i~~~~~~~~~g~l~dr----~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (486)
++..+.....++++++.+++|+++|| ..+|........+..+.. +.+.............+....+.....+...
T Consensus 310 ~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (495)
T KOG2533|consen 310 QANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIAL 389 (495)
T ss_pred HhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHH
Confidence 99999999999999999999999999 556666655555544433 4444444344444445555555666677778
Q ss_pred hhccccccccchhh-HhHHHHHHHHHHHHHHHHHHHH-HHHhhccchHH
Q 011416 405 IYAAEIYPTSVRST-GAGAANAMGRIGGMVCPLVAVA-LVANCHQMTAV 451 (486)
Q Consensus 405 ~~~~~~~~~~~~~~-~~g~~~~~~~~g~~~~~~i~g~-l~~~~g~~~~~ 451 (486)
...++....+.+.. ..+......+.++.++|.+.-. ....+++...+
T Consensus 390 ~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 390 SWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred hhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHH
Confidence 88887776554443 3344444445555555555432 22234555556
No 73
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.1e-30 Score=246.85 Aligned_cols=333 Identities=15% Similarity=0.156 Sum_probs=238.1
Q ss_pred hhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHH
Q 011416 39 MEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLIT 118 (486)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~ 118 (486)
+....+.|..|.+.+++|+|+.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.++++++.+++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 34456678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHH-HHhh
Q 011416 119 LRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL-AFLG 196 (486)
Q Consensus 119 ~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~-~~~~ 196 (486)
.|++.|++.+.. +...+++.|++|+++|++++++.+.+..+|..++|.+++.+.+..+||+.|++.+++.++.. +..+
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887 77778999999999999999999999999999999999999998999999998888777654 3455
Q ss_pred ccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhh
Q 011416 197 FQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLML 276 (486)
Q Consensus 197 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 276 (486)
++||+++... +++.+.++ ....+++.
T Consensus 165 ~~~~~~~~~~--~~~~~~~~----------------------------------------------------~~~~~~~~ 190 (377)
T PRK11102 165 FIPETLPKER--RQPFHLRT----------------------------------------------------TIRNFASL 190 (377)
T ss_pred hCCccCcccc--cCCCChHH----------------------------------------------------HHHHHHHH
Confidence 5666542110 00000000 00133334
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHh
Q 011416 277 FSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA 356 (486)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~ 356 (486)
++++....... ..+......+....+.+.+. .+..|.++.+.+.......++.+++.++.+++.||+
T Consensus 191 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 257 (377)
T PRK11102 191 FRHKRVLGYML---ASGFSFAGMFSFLTAGPFVY----------IELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV 257 (377)
T ss_pred HcChHHHHHHH---HHHHHHHHHHHHHHcCHHHH----------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44433222221 11111122222222222211 123478889999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHh---h-hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHH-HHH
Q 011416 357 GRKLSITIMFTLSCLFLLPLV---T-YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR-IGG 431 (486)
Q Consensus 357 g~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~ 431 (486)
|+|+.+..+..+..+..+.+. . ..+.+...+...+...+.+...+.......|..| +.++++.++.+.... ++.
T Consensus 258 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~ 336 (377)
T PRK11102 258 GALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGA 336 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHH
Confidence 999988877765444322222 1 1223333333333334444445555566777776 779999999877654 666
Q ss_pred HHHHHHHH
Q 011416 432 MVCPLVAV 439 (486)
Q Consensus 432 ~~~~~i~g 439 (486)
.+++.+.+
T Consensus 337 ~~g~~~~~ 344 (377)
T PRK11102 337 IVGALLSL 344 (377)
T ss_pred HHHHHHHh
Confidence 66665543
No 74
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.1e-32 Score=256.84 Aligned_cols=426 Identities=16% Similarity=0.106 Sum_probs=315.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHH
Q 011416 18 GFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEA 97 (486)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~ 97 (486)
+.+.+.|.+++..++..+........++.+.+.++++++-+.++++|+.++....+.+..|+.+.+.||+|.|.+.+.|.
T Consensus 39 PdGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~ 118 (509)
T KOG2504|consen 39 PDGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGG 118 (509)
T ss_pred CCCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHH
Confidence 36778899999988988888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcCCCHHHHHHH-HHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 011416 98 LVTAGAGLLSSFSPNYITLITL-RCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL 175 (486)
Q Consensus 98 ~~~~~~~~~~~~a~~~~~l~~~-r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~ 175 (486)
++.++|.++.++++++|++++. -++.|+|.|.. .+....+..++ +|+|+.+.|+..++.++|.++-|.+...+.+.+
T Consensus 119 ~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~ 197 (509)
T KOG2504|consen 119 LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence 9999999999999999988765 57899999998 55555666555 688999999999999999999999999999999
Q ss_pred CcHHHHHHhHHHHHHHHHHhhccCC-CchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCcc----
Q 011416 176 DWRWLLGLSSIPSFILLAFLGFQPE-SPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPE---- 250 (486)
Q Consensus 176 ~w~~~f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 250 (486)
|||+.+++.+.+.+..++....+++ .++.... + .+..+. .....+......+. ...+++....+
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~----~--~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 266 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRPLSPPKKPN----E--EKDLRN----SAASVESTPKPVEL-RISERDSGLKKLSLS 266 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch----h--hhhhcc----cccccccccccccc-ccccCCCCCCccccc
Confidence 9999999988888766555444433 3221111 1 111111 00000000000000 00000000000
Q ss_pred -chhhcccCCCCCcccCCCchh-hhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCC
Q 011416 251 -LVHLLSSNGGNKTTEGKSGLS-LFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQD 328 (486)
Q Consensus 251 -~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (486)
.....+..++.+....+.... .-.+++++ +.++..........+.++....+.+.+. ...+.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~---~~fl~~~~~~~~~~~g~~~p~~~l~~~~-----------~~~g~~~ 332 (509)
T KOG2504|consen 267 NLATLKRGPDKWRNSPLQAFLSMLDLSLLKD---PKFLLLALSNLFAYLGFNVPFVYLPSYA-----------KSLGLSS 332 (509)
T ss_pred chhhhhhCCccccccchhhhhhhhhHHHHcC---chHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hhcCCCh
Confidence 000000000011001111000 01234444 3444455555566677777777777665 4568999
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHhc--hhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhh
Q 011416 329 ANLYIDEFITSLAEIPGLLLAAILVDTAG--RKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIY 406 (486)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (486)
.+++...+..++..++++++.|++.|+.. ++....++.+..+++.+.++..++.+.+.....++|++.+.........
T Consensus 333 ~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i 412 (509)
T KOG2504|consen 333 NDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVI 412 (509)
T ss_pred hhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999976 5566677777778887777788888888999999999999988888899
Q ss_pred ccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHhccc
Q 011416 407 AAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 407 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
+.|+.+.++...++|+...+..++..++|.+.|++.|..+ |...|...+...+++....+...
T Consensus 413 ~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 413 LVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999999999988 66677777777776665555443
No 75
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=1.8e-30 Score=248.41 Aligned_cols=377 Identities=13% Similarity=0.013 Sum_probs=243.9
Q ss_pred HHHHHHHhhHhhhhchhch-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhh--
Q 011416 32 LGWVAEAMEIMILSFVGPT-VKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSS-- 108 (486)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~-- 108 (486)
+.+++..+......+.+|. +.+++|+|..+.|++.+++.+++.+++++.|+++||+|||+++.++..+.+++.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 3445555544555555555 4556999999999999999999999999999999999999999887666554433211
Q ss_pred -cCC-----CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 011416 109 -FSP-----NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLL 181 (486)
Q Consensus 109 -~a~-----~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f 181 (486)
.++ ......+.+++.|.+.... +....+. +.. ++++++.+|......++|..++|++++.+.+ .+|+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f 173 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINF 173 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHH-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhH
Confidence 111 1111222333344333322 2222222 222 3457788899999999999999999998876 5999999
Q ss_pred HHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCC
Q 011416 182 GLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGN 261 (486)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (486)
++.+++.++..+..++.+++++....++++++ .+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~------------------------------------ 207 (420)
T PRK09528 174 WLGSGSALILLVLLFFAKPDAPSTAKVANALG----------AN------------------------------------ 207 (420)
T ss_pred HHHHHHHHHHHHHHhcccccccchhhhccchh----------cc------------------------------------
Confidence 99888777765555544333221000000000 00
Q ss_pred CcccCCCchhhhHhhhchhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHh
Q 011416 262 KTTEGKSGLSLFLMLFSSKLARTTILLWLLL-FGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSL 340 (486)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 340 (486)
+.+...+..+..++++..+...+..... ............+..... .+.+.+....+.......+
T Consensus 208 ---~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~g~~~~~~~~ 273 (420)
T PRK09528 208 ---ASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFF-----------ATPEQGTRVFGYLNSFQVF 273 (420)
T ss_pred ---cccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHH-----------hccCcchHHHHHHHHHHHH
Confidence 0000011233344443322222211111 111111111112222111 1224555667888888888
Q ss_pred hHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHh
Q 011416 341 AEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGA 420 (486)
Q Consensus 341 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (486)
..+++.++.|++.||+++|+.+..+.++.++..+++.+.++.+.......+.++..+...+....+..+.+|++.+++..
T Consensus 274 ~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~ 353 (420)
T PRK09528 274 LEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIY 353 (420)
T ss_pred HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeee
Confidence 89999999999999999999998888888887777777667766666666677776666677778889999999999887
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 421 GA-ANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 421 g~-~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
+. .+....+|..++|.+.|++.|..|+...+...+++.++..++.+...++
T Consensus 354 ~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 354 LVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66 6777889999999999999999999999998888877766666555433
No 76
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=3.5e-31 Score=249.39 Aligned_cols=344 Identities=16% Similarity=0.163 Sum_probs=243.1
Q ss_pred HHHHHHHHHHHhhHhhhhchhch-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhh
Q 011416 28 AYAGLGWVAEAMEIMILSFVGPT-VKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLL 106 (486)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 106 (486)
...++.++..+......++..|. +++++|+|..+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34667777888888999999995 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCC-CHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc----------CC
Q 011416 107 SSFSP-NYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP----------RL 175 (486)
Q Consensus 107 ~~~a~-~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~----------~~ 175 (486)
+++++ +++.+++.|+++|++.+...+..+++.|++|+++|+++.++.....++|..+++.+++.+.+ ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~ 163 (366)
T TIGR00886 84 AGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHL 163 (366)
T ss_pred HHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 99999 99999999999999966556667889999999999999999998888888888777766553 34
Q ss_pred CcHHHH-HHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchh
Q 011416 176 DWRWLL-GLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVH 253 (486)
Q Consensus 176 ~w~~~f-~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (486)
+||+.| +..+++..+. .+...+.+|+|+.. + ++.+. +.... ..+
T Consensus 164 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~--------~~~~~----------------~~~----- 209 (366)
T TIGR00886 164 AWGWAFVIVPAGILLLPALLIFFVGADTPPGK----P-ATGKL--------SFKGA----------------RWS----- 209 (366)
T ss_pred cccchhHHHHHHHHHHHHHHHHHhcccCCccc----c-cchhc--------ccccc----------------ccc-----
Confidence 899999 4445444443 44445556655311 0 00000 00000 000
Q ss_pred hcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHH
Q 011416 254 LLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYI 333 (486)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (486)
..+......++.++++..+ ......+.....++....+.+.+.+ +..+.++.+++.
T Consensus 210 -----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~g~~~~~~~~ 265 (366)
T TIGR00886 210 -----------VGTGALGDQLKVFRDRHTW---ILALLYSVTFGSFLGVSSIFAMFFK----------DQFGLSKVTAGA 265 (366)
T ss_pred -----------ccchhHHHHHHHHhccchh---hHHHHHHHHHHHHHHHHHHHHHHHH----------HHcCCcHHHHHH
Confidence 0000001223333333222 2222223333333444444444331 234788888898
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh--hc--hhHHHHHHHHHHHHhhhhhhhhHhhhccc
Q 011416 334 DEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQ--SNILTTGLLFGARMCVMGAFTVSLIYAAE 409 (486)
Q Consensus 334 ~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (486)
......+..+++++++|++.||+++|+....+....+.+...+.. .. +.+.......+..+..+...+..+....+
T Consensus 266 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 345 (366)
T TIGR00886 266 YASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPH 345 (366)
T ss_pred HHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchh
Confidence 888889999999999999999999988777666665555544443 22 34444445555566666677778888888
Q ss_pred cccccchhhHhHHHHHHHHHH
Q 011416 410 IYPTSVRSTGAGAANAMGRIG 430 (486)
Q Consensus 410 ~~~~~~~~~~~g~~~~~~~~g 430 (486)
..| +++|+++|+.+..+++|
T Consensus 346 ~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 346 IFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred hch-hhcccHHHHHHHhccCC
Confidence 887 57999999999988765
No 77
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=9.4e-30 Score=240.14 Aligned_cols=355 Identities=8% Similarity=-0.073 Sum_probs=254.5
Q ss_pred HHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcch----HHHHHHHHHHHHhhhhhhc
Q 011416 34 WVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRR----MGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r----~~~~~~~~~~~~~~~~~~~ 109 (486)
++..........|.+|.+.+++|.|..++|++.+++.++..++++++|++.||+||| +.+.++..+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 455556667888899999999999999999999999999999999999999999984 3333322222 2233445
Q ss_pred CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHH
Q 011416 110 SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPS 188 (486)
Q Consensus 110 a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~ 188 (486)
++|+|.+++.|++.|++.+.. +...+++.++ +++|+++.+......++|.++||++++.+.+++|||..|++.++..
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~ 168 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGV 168 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 689999999999999988877 6666666665 4568888899999999999999999999999999999998877655
Q ss_pred HHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCC
Q 011416 189 FILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKS 268 (486)
Q Consensus 189 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (486)
++..+..++.||+++ ++++++. .+.
T Consensus 169 ~~~~~~~~~~~~~~~----~~~~~~~---------------------------------------------------~~~ 193 (382)
T PRK11128 169 ASMLLGQLLRPTIMP----QGESRQQ---------------------------------------------------ESA 193 (382)
T ss_pred HHHHHHHHccCCCCC----ccccccc---------------------------------------------------ccc
Confidence 544444444444311 0000000 000
Q ss_pred chhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHH
Q 011416 269 GLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLL 348 (486)
Q Consensus 269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 348 (486)
....++++++++..+......+.. ...+.....+.+.+. ++.|.++.+.+.......++.++..++
T Consensus 194 ~~~~~~~i~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~-----------~~~g~s~~~~g~~~~~~~~~~~~~~~~ 259 (382)
T PRK11128 194 GWPAWKALLKEPTVWRFLLCVSLL---QGSHAAYYGFSAIYW-----------QAAGYSASTIGYLWSLGVVAEVLIFAF 259 (382)
T ss_pred ccchHHHHHcChhHHHHHHHHHHH---HHHhHhHHHHHHHHH-----------HHCCCCHhHHHHHHHHHHHHHHHHHHH
Confidence 011455666665444333322222 122222222333222 235788888898888888999999999
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHH-H
Q 011416 349 AAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAM-G 427 (486)
Q Consensus 349 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~ 427 (486)
.+++.||+++|+.+..+.+..++..+.+...++.+...+..++.+++.+...+....+..+. +++++++..++.+.. .
T Consensus 260 ~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 338 (382)
T PRK11128 260 SNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAM 338 (382)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHH
Confidence 99999999999999988888888877777677777777778888888888888888887776 455578889988744 4
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH
Q 011416 428 RIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSIL 463 (486)
Q Consensus 428 ~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 463 (486)
.+|..++|.+.|.+.|..|. ..++..+++.+++.+
T Consensus 339 ~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 339 GGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 67789999999999999886 455555555554433
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=3e-29 Score=238.42 Aligned_cols=366 Identities=16% Similarity=0.070 Sum_probs=257.7
Q ss_pred HHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh-----cchH-HHHHHHHHHHHhh
Q 011416 31 GLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY-----GRRM-GFLGEALVTAGAG 104 (486)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----G~r~-~~~~~~~~~~~~~ 104 (486)
...++..+.........+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| ++..+.++.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 44567778888888889999999999999999999777776 68899999999999 8865 7888888888888
Q ss_pred hhhhcC---CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcHH
Q 011416 105 LLSSFS---PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-LDWRW 179 (486)
Q Consensus 105 ~~~~~a---~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~-~~w~~ 179 (486)
.+.++. ++++.+++..++.++..+.. ++..+++.|+.|+++|+++.++...+.++|.++++.++..+.+. .|||.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 887776 35788888888888877777 77789999999999999999999999999999999999998885 59999
Q ss_pred HHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCC
Q 011416 180 LLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNG 259 (486)
Q Consensus 180 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (486)
.|++.++..++..+..++.||+++.. +++++.++. .
T Consensus 163 ~f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~~~~---~-------------------------------------- 198 (402)
T PRK11902 163 TYLLMAGLMLAGALTTLWAPEPEVPA---RPPRSLGEA---V-------------------------------------- 198 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccc---cccchhHHH---H--------------------------------------
Confidence 99998887776655556667654321 010000000 0
Q ss_pred CCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHH
Q 011416 260 GNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITS 339 (486)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (486)
...++++++++..+..+.............+.. ..+.+ .++.|.++.+.+......+
T Consensus 199 ----------~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~--~~~~l-----------~~~~G~~~~~~g~~~~~~~ 255 (402)
T PRK11902 199 ----------VGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSL--STTFL-----------IRGAGFSAGEVGIVNKTLG 255 (402)
T ss_pred ----------HHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHH--HHHHH-----------HHhcCCCHHHHHHHHhHHH
Confidence 014555666665454444333322211111111 11111 1234788888888775544
Q ss_pred -hhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH---hhh-chhHHHHHHHH----HHHHhhhhhhhhHhhhcccc
Q 011416 340 -LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPL---VTY-QSNILTTGLLF----GARMCVMGAFTVSLIYAAEI 410 (486)
Q Consensus 340 -i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 410 (486)
++.+++.++++++.||+++|+.+..+..+..+..+.+ ... ++.+....... ..++..+...+....++.+.
T Consensus 256 ~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 335 (402)
T PRK11902 256 LAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRS 335 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4688999999999999999988776666555443332 222 33343333332 34445555566777777777
Q ss_pred ccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 411 YPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 411 ~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.|.+ ..++.+....++..+++.+.|.+.|..|+...|.+.+.+++++.++.+...
T Consensus 336 ~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 336 FSAT----QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred CcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh
Confidence 7654 345666666777877777899999999999888888888877766654443
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=100.00 E-value=1.2e-29 Score=241.03 Aligned_cols=381 Identities=12% Similarity=0.008 Sum_probs=254.0
Q ss_pred HHHHHHHHhhHhhh-hchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-hHHHHHHHHHHHHhhhhhh
Q 011416 31 GLGWVAEAMEIMIL-SFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGR-RMGFLGEALVTAGAGLLSS 108 (486)
Q Consensus 31 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~~~~~~~~~~~~~~~~~ 108 (486)
++.+++.+...... ++..+.+.+++|++..|+|++.+++.++..++++++|.++||+|+ |+++.++.++.+++..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 44455555655565 555566778899999999999999999999999999999999965 7788888888888888889
Q ss_pred cCCCHHHHHHHHHHHHhccCcc-hhhhhhh----c----cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 011416 109 FSPNYITLITLRCLVGVGLGSG-HVFLSWF----L----EFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRW 179 (486)
Q Consensus 109 ~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i----~----~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~ 179 (486)
+.++++.+++.|++.|++.+.. +...++. . |......|.+..| .+|.++++.+++.+....+|+
T Consensus 88 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~- 160 (418)
T TIGR00889 88 QVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI- 160 (418)
T ss_pred HhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-
Confidence 9999999999999999987665 4433332 2 2233334555554 468888888888774333455
Q ss_pred HHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCC
Q 011416 180 LLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNG 259 (486)
Q Consensus 180 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (486)
+|++.++..++..+..+++||+|+...++ +.+ .++..
T Consensus 161 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~-~~~~~----------------------------------------- 197 (418)
T TIGR00889 161 QLYITAGSSALLGVFALTLPDIPVAKSTA-KMS-IKVML----------------------------------------- 197 (418)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcccc-ccC-HHHHh-----------------------------------------
Confidence 45566665555555566778765311000 000 00000
Q ss_pred CCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHH
Q 011416 260 GNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITS 339 (486)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (486)
....+.++|++....+....++. .........+.+.+.+..+..+ ....+.+....+.......
T Consensus 198 ----------~~~~~~~~k~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~g~~~~~~~ 261 (418)
T TIGR00889 198 ----------GLDAFILFKNKRMAIFFFFSMLL---GAPLQITNIFGNGFLHEFGRNP---EFADSFVVKNASIWMSLSQ 261 (418)
T ss_pred ----------hhhHHHHhcCCCeeeHHHHHHHH---HhHHHHHHHhHHHHHHHhcccc---cccchhhhhhHHHHHHHHH
Confidence 00122233333322222222221 1111111122222221000000 0000123456688888889
Q ss_pred hhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-h---hHHHHHHHHHHHHhhhhhhhhHhhhccccccccc
Q 011416 340 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ-S---NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 415 (486)
Q Consensus 340 i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (486)
+..+++.+..|++.||+|+|+++..+.++.++....+.... + .+...+..++.+++.+...+....++.|.+|++.
T Consensus 262 i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~ 341 (418)
T TIGR00889 262 FSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI 341 (418)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 99999999999999999999999999988888766665522 1 2334455666777777777888889999999999
Q ss_pred hhhHhHHHH-HHHHHHHHHHHHHHHHHHHhhc------cchHHHHHHHHHHHHHHHHhcccccccCCCc
Q 011416 416 RSTGAGAAN-AMGRIGGMVCPLVAVALVANCH------QMTAVVLLVVVIVTSILSVMLIPFETKGQEL 477 (486)
Q Consensus 416 ~~~~~g~~~-~~~~~g~~~~~~i~g~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (486)
|++++|+.+ ....+|..++|.+.|.+.|+.| |...|.+.+++.+++.++.+++.++++++-.
T Consensus 342 ~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~ 410 (418)
T TIGR00889 342 RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIK 410 (418)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 999999997 5678999999999999999854 6677888888888888887777776655433
No 80
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=2.4e-30 Score=242.10 Aligned_cols=332 Identities=17% Similarity=0.165 Sum_probs=245.1
Q ss_pred HhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHH
Q 011416 41 IMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLR 120 (486)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r 120 (486)
....++.+|.+.+++|+|.++.|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+++ .+++++.+++.|
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT 94 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999988888877 778999999999
Q ss_pred HHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcHHHHHHhHHHHHHHHHHhhc
Q 011416 121 CLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL--DWRWLLGLSSIPSFILLAFLGF 197 (486)
Q Consensus 121 ~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~ 197 (486)
++.|++.+.. +.....+.|+++ ++|++++++.+.+.++|..+++.+++.+.+.. +||..|...+++.++... .+
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~ 171 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AW 171 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HH
Confidence 9999999876 555567778885 68999999999999999999999998887654 399998877665443322 22
Q ss_pred cCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhh
Q 011416 198 QPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLF 277 (486)
Q Consensus 198 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 277 (486)
+|+.++. ++++ ... + ....++++
T Consensus 172 ~~~~~~~----~~~~-------------~~~------------------------------------~----~~~~~~~~ 194 (355)
T TIGR00896 172 IPQVRRR----VAAN-------------QTT------------------------------------T----RLTPVRIW 194 (355)
T ss_pred hhhhccc----cCCC-------------CCC------------------------------------C----CCCCchhh
Confidence 3332210 0000 000 0 00122233
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHh-
Q 011416 278 SSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA- 356 (486)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~- 356 (486)
+++.. +......+.....++....+.|.+. ++.|.+..+.+...+...++.++++++.|++.||+
T Consensus 195 ~~~~~---~~~~~~~~~~~~~~~~~~~~lp~~~-----------~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~ 260 (355)
T TIGR00896 195 RSPLA---WQVTVFFGLQSGLYYSLIGWLPAIL-----------ISHGASAATAGSLLALMQLAQAASALLIPALARRVK 260 (355)
T ss_pred cCHhH---HHHHHHHHHHHHHHHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhc
Confidence 33322 2222223333444555555666544 23578888899999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccc-cccchhhHhHHHHHHHHHHHHHHH
Q 011416 357 GRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIY-PTSVRSTGAGAANAMGRIGGMVCP 435 (486)
Q Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~ 435 (486)
+||+.+.++..+.+++.+.+....+.... ....+.+++.+..++...+...+.. +++.+++..++.+...+++..++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp 339 (355)
T TIGR00896 261 DQRGIVAVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGP 339 (355)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666667777777766655543332222 2345678888888887777666544 456678999999999999999999
Q ss_pred HHHHHHHHhhccc
Q 011416 436 LVAVALVANCHQM 448 (486)
Q Consensus 436 ~i~g~l~~~~g~~ 448 (486)
.+.|++.|+.|.+
T Consensus 340 ~~~G~l~~~~g~~ 352 (355)
T TIGR00896 340 LFVGVLHDISGNW 352 (355)
T ss_pred HHHHHHHHHhccc
Confidence 9999999988754
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=1.6e-28 Score=235.22 Aligned_cols=376 Identities=16% Similarity=0.038 Sum_probs=292.0
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhh
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGL 105 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 105 (486)
.+-.++++.++..+...+.....+.+..+..-|+...+++..+..+...+.++++|.++||++||++++.+.++.++..+
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~ 90 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVAL 90 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Confidence 34445667777777777777778888888888999999999999999999999999999999999999999887766554
Q ss_pred hhhcC-----CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 011416 106 LSSFS-----PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRW 179 (486)
Q Consensus 106 ~~~~a-----~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~ 179 (486)
+.++. .+.+.+++.-++.|++.+.. |...+.+.|..|+++...+.++.+...++..++||.++|.+....|-.+
T Consensus 91 ~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~ 170 (524)
T PF05977_consen 91 LLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAA 170 (524)
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 43332 47899999999999999998 8888999999999999999999999999999999999999998889999
Q ss_pred HHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCC
Q 011416 180 LLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNG 259 (486)
Q Consensus 180 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (486)
+|.+.++..++.++.....+.+++. ++.+ .++..+.+++
T Consensus 171 ~f~inalsfl~~i~~l~~~~~~~~~---~~~~--~e~~~~~l~~------------------------------------ 209 (524)
T PF05977_consen 171 AFLINALSFLISILALLRWKPPPPP---SSLP--RERFFSALRE------------------------------------ 209 (524)
T ss_pred HHHHHHHHHHHHHHHHHHccccccc---cccc--hhhhhhhHHH------------------------------------
Confidence 9988877655544443333322110 0011 1111111111
Q ss_pred CCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHH
Q 011416 260 GNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITS 339 (486)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (486)
.++.+++++..+..+.............+ ...|.+. .+..+.++...|++.+..+
T Consensus 210 ------------G~ryv~~~~~l~~~l~~~~~~~l~~~a~~---aLlPl~a----------~~~l~~~a~~yGll~a~~g 264 (524)
T PF05977_consen 210 ------------GLRYVRSSPPLRSVLLRSFLFNLFASAVW---ALLPLFA----------RDVLGGGASGYGLLLAAFG 264 (524)
T ss_pred ------------HHHHHhcchHHHHHHHHHHHHHHhhhHHH---HhhhHHH----------HHHhCCcHHHHHHHHHHHH
Confidence 44555555554544443333322222222 2233332 1234788889999999999
Q ss_pred hhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhH
Q 011416 340 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 419 (486)
Q Consensus 340 i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (486)
++.++|.++.+++.+|+++++++..+.++.+++++.+.+.++.+...+.+++.|++.....+...+...+..|++.||++
T Consensus 265 vGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv 344 (524)
T PF05977_consen 265 VGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRV 344 (524)
T ss_pred HHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHH
Confidence 99999999999999999999998889888888888888888888888888889999888888999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhc
Q 011416 420 AGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVML 467 (486)
Q Consensus 420 ~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 467 (486)
++++.+....+..+|..+.|.+.+..|....+.+.++..+++.++.+.
T Consensus 345 ~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 345 FSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888887777666555555443
No 82
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.97 E-value=8.7e-30 Score=221.00 Aligned_cols=353 Identities=15% Similarity=0.069 Sum_probs=242.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcchhhhhh
Q 011416 57 LSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSGHVFLSW 136 (486)
Q Consensus 57 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~ 136 (486)
.+..-.|.+.|.|.+++.+.++.+|.++||+|||+++.++++..+++..+.+.+.|+..++++|++.|+..|...+..++
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAi 144 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAI 144 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHH
Confidence 34456799999999999999999999999999999999999999999999999999977777799999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcHHHHHH----hHHHHHH-HHHHhhccCCCchhhhhc
Q 011416 137 FLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP---RLDWRWLLGL----SSIPSFI-LLAFLGFQPESPRYLCLK 208 (486)
Q Consensus 137 i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~---~~~w~~~f~~----~~~~~~~-~~~~~~~~~e~~~~~~~~ 208 (486)
++|.+++|+|+++++.+...+++|.++||.+|+++.. ..| +++|.. ..++... .....+++||+-+...++
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~ 223 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN 223 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc
Confidence 9999999999999999999999999999999999977 222 112222 2222222 344567788874321111
Q ss_pred CChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHH
Q 011416 209 GRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILL 288 (486)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 288 (486)
+...+..+..+...+..+ .+ ...... ..+++.....+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~-------------------------------~~---------~~~~v~-~lrn~p~~~~i~~ 262 (451)
T KOG2615|consen 224 DEHSTLQEAADDRLALLK-------------------------------FA---------RIFKVA-ALRNPPLLDFISV 262 (451)
T ss_pred ccccchhhhhhhhhhhcc-------------------------------hh---------hhhhhh-hhcCccccchHHH
Confidence 000000000000000000 00 000000 0111111111111
Q ss_pred ----HHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhc--hhHHH
Q 011416 289 ----WLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAG--RKLSI 362 (486)
Q Consensus 289 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g--~~~~~ 362 (486)
...++.....+-........+. .+++++++.+.|.+....++.+.+......+..+|.+ .+-.+
T Consensus 263 ~~i~~l~~~ly~~l~s~~~~t~~~l~----------~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l 332 (451)
T KOG2615|consen 263 LRIFGLHYFLYLELFSGLENTVLFLT----------HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVL 332 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhh----------cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHH
Confidence 1111222222222222222221 2567899999999998888888888777777777766 56666
Q ss_pred HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 363 TIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 442 (486)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~ 442 (486)
..+..++.-.++.+........+.....+..+......+....+.....|+++||+.+|+....+.++.++||.+.|.+.
T Consensus 333 ~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~ 412 (451)
T KOG2615|consen 333 LFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIF 412 (451)
T ss_pred HHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeE
Confidence 66677766677777766667777888888888888888999999999999999999999999999999999999998776
Q ss_pred Hhh-ccchHHHHHHHHHHHH
Q 011416 443 ANC-HQMTAVVLLVVVIVTS 461 (486)
Q Consensus 443 ~~~-g~~~~~~~~~~~~~~~ 461 (486)
.+. +.+.++...+.+.++.
T Consensus 413 ~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 413 SWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred EEecCCCceeeehHHHHHHH
Confidence 643 2334444444444444
No 83
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=1.2e-28 Score=230.81 Aligned_cols=321 Identities=14% Similarity=0.119 Sum_probs=234.5
Q ss_pred HhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh-----cchHH-HHHHHHHHHHhhhhhhcC---C
Q 011416 41 IMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY-----GRRMG-FLGEALVTAGAGLLSSFS---P 111 (486)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----G~r~~-~~~~~~~~~~~~~~~~~a---~ 111 (486)
....++..|.+.+|+|+|.+++|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++. .
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3456778899999999999999999765 455555 89999999998 89886 567788888887777777 4
Q ss_pred CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------cHHHHH
Q 011416 112 NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD--------WRWLLG 182 (486)
Q Consensus 112 ~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~--------w~~~f~ 182 (486)
+.+.+....++.+++.+.. ++..+++.|++|+|+|+++.++...+.++|.++++.+++.+.+..+ ||..|+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 5666777778888887777 7777899999999999999999999999999999999999988888 999999
Q ss_pred HhHHHHHHHHHHhhc-cCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCC
Q 011416 183 LSSIPSFILLAFLGF-QPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGN 261 (486)
Q Consensus 183 ~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (486)
+.++..++..+..++ .||+++. ++++++..+. .
T Consensus 162 i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~~---~---------------------------------------- 195 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKEPQED---ASVPKPLTQA---V---------------------------------------- 195 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCcc---cccchhHHHH---H----------------------------------------
Confidence 988877776555443 4553221 0000000000 0
Q ss_pred CcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHH-h
Q 011416 262 KTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITS-L 340 (486)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i 340 (486)
...++++++++..+..+......+.....++....+.+.+. .+.|.++.+.+......+ +
T Consensus 196 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~g~~~~~~g~~~~~~~~~ 256 (356)
T TIGR00901 196 --------LKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFL-----------LDMGFSKEEIALVAKINGLL 256 (356)
T ss_pred --------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHcCCCHHHHHHHhHHHHHH
Confidence 00344455544333344344444444455555555555443 225788888887776655 5
Q ss_pred hHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-----------chhHHHHHHHHHHHHhhhhhhhhHhhhccc
Q 011416 341 AEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-----------QSNILTTGLLFGARMCVMGAFTVSLIYAAE 409 (486)
Q Consensus 341 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (486)
..+++.+++|++.||+|+|+.+..+.++.++....+.+. ++.+......++.+++.+..++...++..|
T Consensus 257 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 336 (356)
T TIGR00901 257 GAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSK 336 (356)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 778999999999999999998888887777665544432 233445555667788888999999999999
Q ss_pred cccccchhhHhHHHHHHHH
Q 011416 410 IYPTSVRSTGAGAANAMGR 428 (486)
Q Consensus 410 ~~~~~~~~~~~g~~~~~~~ 428 (486)
.+|+++||+.+|+.+...+
T Consensus 337 ~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 337 LSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hcCCCccHHHHHHHHHHHh
Confidence 9999999999999887654
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4e-28 Score=213.78 Aligned_cols=366 Identities=14% Similarity=0.116 Sum_probs=281.3
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHh
Q 011416 24 CFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGA 103 (486)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 103 (486)
...+..+....++.++......+++|.+++.|+++..|.+++..+++.+|.+.+++.|++.+|+|+|+.+++|+.+.+++
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34555666667888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhh---cCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-----
Q 011416 104 GLLSS---FSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR----- 174 (486)
Q Consensus 104 ~~~~~---~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~----- 174 (486)
+.+.. ...+|..++++-++.|.|.+.. ....++++...++++-.+.+++.+..+++|.+++|++++.+..+
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 99885 5578999999999999999999 88899999999999999999999999999999999999988762
Q ss_pred --------------CCcHHHHHHhHHHHHHHHHHhhc--cCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhcc
Q 011416 175 --------------LDWRWLLGLSSIPSFILLAFLGF--QPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARR 238 (486)
Q Consensus 175 --------------~~w~~~f~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (486)
..||.+|...+...+++.+.... .|+.+.....+.+
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~---------------------------- 223 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGA---------------------------- 223 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccc----------------------------
Confidence 23788887777666665444333 2332211000000
Q ss_pred ccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 011416 239 STLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRS 318 (486)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (486)
.+.....+++++++.+...+..+++.+ .......+.+.+.
T Consensus 224 -----------------------------~~~~~~~~l~~~~~~~~gvl~~FlYVG---~Eva~gsfl~~y~-------- 263 (422)
T COG0738 224 -----------------------------SGSAGLSSLFQNKHLRLGVLAIFLYVG---AEVAIGSFLVSYL-------- 263 (422)
T ss_pred -----------------------------cccchHHHHHhChHHHHHHHHHHHHHh---HHHHHHHHHHHHH--------
Confidence 000034455666665555544444443 3333334444433
Q ss_pred CccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhh
Q 011416 319 PLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMG 398 (486)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (486)
.+..+.+..++....+....+.++|++++.++..|+...+.+.....+..+.++.....++. .......+.|++++.
T Consensus 264 --~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~-v~~~~l~~ig~F~si 340 (422)
T COG0738 264 --EELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGV-VALYALFLIGLFNSI 340 (422)
T ss_pred --HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHhHH
Confidence 12257899999999999999999999999999999999999988777776666666666554 445566777899999
Q ss_pred hhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHH
Q 011416 399 AFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSI 462 (486)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 462 (486)
.+|...+...+..| ++ ....|....+...|+++.|.+.|++.|..|....+.....+|.+..
T Consensus 341 mfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 341 MFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 99999999999998 33 3334445566678999999999999999998777665555554444
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.97 E-value=3.4e-28 Score=230.95 Aligned_cols=371 Identities=15% Similarity=0.081 Sum_probs=252.6
Q ss_pred HHHHHHHHHHhhHhhhhchhchh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhh
Q 011416 29 YAGLGWVAEAMEIMILSFVGPTV-KSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLS 107 (486)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 107 (486)
.+...+++.+.......+.+|.+ .+++|.+..+.|++.+++.+++.+++++.|+++||+|||+.++.+....+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34445566666666777777765 56799999999999999999999999999999999999999988776665544322
Q ss_pred ---hcCC-----CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Q 011416 108 ---SFSP-----NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 108 ---~~a~-----~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
.+.+ .+..+++.|++.|++.+.. +....+..+.. ++++...|......++|.+++|.+++.+.+ .+||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~ 162 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQ 162 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCch
Confidence 2222 2334566788899888877 56656666643 334567788888889999999999998765 6999
Q ss_pred HHHHHhHHHHHHHHHHhhcc-CCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhccc
Q 011416 179 WLLGLSSIPSFILLAFLGFQ-PESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSS 257 (486)
Q Consensus 179 ~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (486)
.+|++.+++.++..+..+.. ||+|+. ++.++. .+.
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-------~~~------------------------------ 198 (396)
T TIGR00882 163 IVFWLGSGFALILMLLLMFAKPKAPSS-------ATVANA-------LGA------------------------------ 198 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhcc-------ccc------------------------------
Confidence 99999888877765444443 333210 000000 000
Q ss_pred CCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHH----HHHHHhhhccccccCCCCccccCCCCCchhHH
Q 011416 258 NGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYA----VVLLISELSSLDTRCRSPLMFSHHPQDANLYI 333 (486)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (486)
.+++.+.++.+++++++..+..... .+.....+.. ...+.+.+. ...+.+....+.
T Consensus 199 ------~~~~~~~~~~~~~l~~~~~~~~~l~---~~~~~~~~~~~~~~~~~y~~~~~-----------~~~~~~~~~~g~ 258 (396)
T TIGR00882 199 ------NASAFSLKLALELFRQRKFWMFVLY---VVGVACVYDVFDQQFANFFTSFF-----------ATPQQGTRVFGY 258 (396)
T ss_pred ------ccCCCCHHHHHHHHcCCcHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhc-----------cccccchHHHHH
Confidence 0000011244555555543322222 1111122211 222222221 112344556677
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccc
Q 011416 334 DEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 413 (486)
Q Consensus 334 ~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (486)
......+...++.+..+++.||+++|+.+.++..+.++........++.+......++.+++..........+..+..++
T Consensus 259 ~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 338 (396)
T TIGR00882 259 VTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDV 338 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 88888888899999999999999999999888888888777666666666666666666666555555556667777888
Q ss_pred cchhhHhHH-HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHh
Q 011416 414 SVRSTGAGA-ANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 414 ~~~~~~~g~-~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 466 (486)
+.+++..+. .+....+|+.++|.+.|++.|..|+..+|.+.+++.++..+...
T Consensus 339 ~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 339 RLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 888887776 67788999999999999999999999999988888777665543
No 86
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1.9e-28 Score=262.66 Aligned_cols=368 Identities=12% Similarity=-0.047 Sum_probs=251.2
Q ss_pred HHHHHHHHHHHhhHhhhhchh-chhhhhcCCCc-chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH---HHHHHHH
Q 011416 28 AYAGLGWVAEAMEIMILSFVG-PTVKSEWNLSS-TEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLG---EALVTAG 102 (486)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~-~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~---~~~~~~~ 102 (486)
...++..+.+++....+..+. ..+..+.+.+. ...++..+++.+.+.++++++|.++||+|||+++.. ..++..+
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 333444444455444444333 34444444433 447888999999999999999999999999997643 2223333
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 011416 103 AGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLL 181 (486)
Q Consensus 103 ~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f 181 (486)
..+.....+|+++++++|+++|++.+.. ++..+++.+++++++|++++|+.+++.++|.++||++++++.+..+|++.|
T Consensus 98 ~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~ 177 (1140)
T PRK06814 98 LAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV 177 (1140)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 3333334589999999999999999988 888899999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCC
Q 011416 182 GLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGN 261 (486)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (486)
+..++..++.++..+++|+++..... .+.+. +..+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~---------------------------------------- 214 (1140)
T PRK06814 178 ALLMGIAVLGWLASLFIPKTGNAAPD-LKIDR--NIIRST---------------------------------------- 214 (1140)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCCC-Ceecc--chHHHH----------------------------------------
Confidence 55555555556666667665421100 00000 000000
Q ss_pred CcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhh
Q 011416 262 KTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLA 341 (486)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 341 (486)
...++.+++++..+...+. .+...+.+.....+.|.+. .+..|.++...+...+..+++
T Consensus 215 --------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~----------~~~~g~~~~~~g~~~~~~~~g 273 (1140)
T PRK06814 215 --------ITLLKYAKADKRIWLAILG---ISWFWLVGAVVLSQLPLLA----------KETLGGDENVATLFLAVFSVG 273 (1140)
T ss_pred --------HHHHHHHhcCchHHHHHHH---HHHHHHHHHHHHHHhHHHH----------HHHcCCchHHHHHHHHHHHHH
Confidence 0134445544443333222 2222222233333444333 123478888999999999999
Q ss_pred HHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--------------------chhHHHHHHHHHHHHhhhhhhh
Q 011416 342 EIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY--------------------QSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 342 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
.++|.++.|++.|+..+++.+..+.++.+++.+.+.+. .+.+...+..++.+++.+...+
T Consensus 274 ~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (1140)
T PRK06814 274 VAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIV 353 (1140)
T ss_pred HHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHH
Confidence 99999999999988776665555554444443333221 4555666677778888888888
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHH
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC-HQMTAVVLLVVVIV 459 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~-g~~~~~~~~~~~~~ 459 (486)
...+++.+..|++.+|+++|+.+++..++..+++.+.|.+.+.. ++...+++.+.+.+
T Consensus 354 ~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 412 (1140)
T PRK06814 354 PLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANL 412 (1140)
T ss_pred HHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999987543 34444444444333
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=1.7e-27 Score=229.30 Aligned_cols=417 Identities=11% Similarity=-0.016 Sum_probs=265.9
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhh-hh--cCCCcchhHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHH
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVK-SE--WNLSSTEESLITTSVFAGLVVGAYAWGLVADN-YGRRMGFLGEALVTAG 102 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~~~~~~~~~~~ 102 (486)
+..+++..+.+.+..+...+.+|.+. ++ +|++..+.|++.+.+.+++.++++++|+++|| +|||+++.++.++.++
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 33444556666666666666666664 44 89999999999999999999999999999999 8999999999999999
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Q 011416 103 AGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSN---RGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 103 ~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
+.++.+++++++.+++.|++.|+|.|.. +...++++|++|+++ |+++.++.+.+.++|.++||++++.+.++.||+
T Consensus 92 g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~ 171 (475)
T TIGR00924 92 GHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYH 171 (475)
T ss_pred HHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 9999999999999999999999999988 777889999998764 888999999999999999999999999989999
Q ss_pred HHHHHhHHHHHHHHHHhhccC----CCchhhhhcCChHHHHHHHHHH-----------HH--hcCCCCCCchhhhccccC
Q 011416 179 WLLGLSSIPSFILLAFLGFQP----ESPRYLCLKGRTAEAHRALEKI-----------AQ--VNKTKLPNGKLVARRSTL 241 (486)
Q Consensus 179 ~~f~~~~~~~~~~~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~ 241 (486)
+.|.+.++..++..+.+.+.+ +.|+. .++..++.++..... .. ...+.........
T Consensus 172 ~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 244 (475)
T TIGR00924 172 VGFNLAAVGMVIGLLTFFAGRHMLRDIGSV--PDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLM----- 244 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccccCCCC--CCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH-----
Confidence 999988765555444333333 22210 000001100000000 00 0000000000000
Q ss_pred CCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCcc
Q 011416 242 PTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLM 321 (486)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (486)
.......... ..+..+. ......+++. ..++.+++........+.......+.+..... .
T Consensus 245 -------~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~-~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~------~ 304 (475)
T TIGR00924 245 -------TVTLAVIIFF-FRLAFKP-----RLDAVARNKM-YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNM------H 304 (475)
T ss_pred -------HHHHHHHHHH-HHHHHhc-----cCCHHHHhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc------c
Confidence 0000000000 0000000 0000001111 12222222222222222222221221110000 0
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhch-----hHHH--HHHHHHHHHHHHHHhh---------hchhHHH
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR-----KLSI--TIMFTLSCLFLLPLVT---------YQSNILT 385 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~-----~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~ 385 (486)
...+......+.......+..++..++..++..|.+| +... .++.++.++++..+.. ..+.++.
T Consensus 305 ~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~ 384 (475)
T TIGR00924 305 HEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFM 384 (475)
T ss_pred ccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHH
Confidence 0001111235667777777777777665544444433 3333 6777887777766653 3467778
Q ss_pred HHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHH
Q 011416 386 TGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSV 465 (486)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 465 (486)
....++.+++.....|..+++..+..|++.||+++|+......+|..+++.+.....+..++...+...+.++++..++.
T Consensus 385 i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 385 VLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999998877776677777777777777666666
Q ss_pred hcccc
Q 011416 466 MLIPF 470 (486)
Q Consensus 466 ~~~~~ 470 (486)
++..|
T Consensus 465 ~~~~~ 469 (475)
T TIGR00924 465 ALMVP 469 (475)
T ss_pred HHHHH
Confidence 65543
No 88
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=1.8e-27 Score=256.38 Aligned_cols=344 Identities=12% Similarity=-0.007 Sum_probs=245.4
Q ss_pred HhhHhhhhchhchhhhhcCCCcc--hhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhh---hcCCC
Q 011416 38 AMEIMILSFVGPTVKSEWNLSST--EESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLS---SFSPN 112 (486)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~s~~--~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~a~~ 112 (486)
..+......+.+.+..+++.+.+ ..+++.+++.+++.++++++|+++||+|||++++++.++.+++.++. ..+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~ 102 (1146)
T PRK08633 23 FNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGW 102 (1146)
T ss_pred HHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 34444555556666667776544 46999999999999999999999999999999999887665555443 34578
Q ss_pred HHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC--------C-CcHHHHH
Q 011416 113 YITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR--------L-DWRWLLG 182 (486)
Q Consensus 113 ~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~--------~-~w~~~f~ 182 (486)
++.+++.|+++|++.+.. ++..+++.|++++++|++++|+...+.++|.++|+.+++++.+. . +|++.+.
T Consensus 103 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~ 182 (1146)
T PRK08633 103 FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAG 182 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHH
Confidence 999999999999999988 77789999999999999999999999999999999999998765 2 3444444
Q ss_pred HhHHHH-HHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCC
Q 011416 183 LSSIPS-FILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGN 261 (486)
Q Consensus 183 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (486)
+..+.. ++.++..+.+||.|+....+++.++ ....+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------------------------------ 219 (1146)
T PRK08633 183 LVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK-YLFPK------------------------------------------ 219 (1146)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCcccccccc-cccHH------------------------------------------
Confidence 433333 3334445566776542111000000 00000
Q ss_pred CcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCc-hhHHHHHHHHh
Q 011416 262 KTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDA-NLYIDEFITSL 340 (486)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i 340 (486)
.....++.+++++..+..++...+.. ...+....+.+.+. .+..+.+.. ..++......+
T Consensus 220 ------~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----------~~~~g~s~~~~~g~~~~~~~i 280 (1146)
T PRK08633 220 ------LLWRNLKLLRSDRVLWLAIIGLSYFW---FISQLAQANFPAYA----------KEVLGLDNTFQVQYLLAASAI 280 (1146)
T ss_pred ------HHHHHHHHHhcCcHHHHHHHHHHHHH---HHHHHHHHhhHHHH----------HHHhCCCcHHHHHHHHHHHHH
Confidence 00113445555544333322222211 11122222223222 123467777 88899999999
Q ss_pred hHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHh
Q 011416 341 AEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGA 420 (486)
Q Consensus 341 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (486)
+.+++.++.+++.||+++++.+.++.++.+++.+.+....+.+...+..++.+++.+...+...+++.+..|++.||+++
T Consensus 281 g~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~ 360 (1146)
T PRK08633 281 GIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVL 360 (1146)
T ss_pred HHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhh
Confidence 99999999999999999988888888877777777766666666677778888888888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 011416 421 GAANAMGRIGGMVCPLVAVALVA 443 (486)
Q Consensus 421 g~~~~~~~~g~~~~~~i~g~l~~ 443 (486)
|+.+.+.+++..+++.+.+.+..
T Consensus 361 ~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 361 AANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888877765544
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=3.6e-28 Score=221.82 Aligned_cols=357 Identities=13% Similarity=0.051 Sum_probs=243.1
Q ss_pred HhhHhhhhchhchhhhhcCCCcch-hHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHH
Q 011416 38 AMEIMILSFVGPTVKSEWNLSSTE-ESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITL 116 (486)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l 116 (486)
.-.+.+.+.+.|.+.+++|+|.+| .|.+.++++.+|++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+
T Consensus 39 ~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 39 AQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred HHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345888899999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHh---HHHHHHHHH
Q 011416 117 ITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLS---SIPSFILLA 193 (486)
Q Consensus 117 ~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~---~~~~~~~~~ 193 (486)
.+.|++.|++.|...+...++..|+|+++|+++.|+..++..+|.++++++++. ...+|||..+.+. .....+.++
T Consensus 119 ~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 119 QLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999888667899999999999999999999999999999999999 4568999866544 223333466
Q ss_pred HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccC------C
Q 011416 194 FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEG------K 267 (486)
Q Consensus 194 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 267 (486)
+.+++|..++..--+++.+.... .. .+.++...+.. .+..+..+. .
T Consensus 198 ~a~~LP~~~~sl~f~~~~~~~~~--------~~-------------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 249 (511)
T TIGR00806 198 LALFLKRPKRSLFFNRLEDVRGA--------LP-------------CELDQMVPGPG-------GKLEDYLGTCRDSFLV 249 (511)
T ss_pred HHHhCCCCchhhhhccccccccc--------cc-------------cccccCCCCCc-------cccchhhhhhhhHHHH
Confidence 67788855443222211100000 00 00000000000 000000000 0
Q ss_pred CchhhhHhhhchhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHH
Q 011416 268 SGLSLFLMLFSSKLARTTILLWLL-LFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGL 346 (486)
Q Consensus 268 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 346 (486)
.-...++...+++. ++.+.+ +......++.+..|.+.+-+... .-.+..-|..-.+..+.+.+..
T Consensus 250 ~l~~~~~~~y~n~~----vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~----------~~~~~yNG~veA~~tllga~~a 315 (511)
T TIGR00806 250 RMLSELVTIYRNPQ----LLLWSLWWVFNSAGYYLITYYVHTLWGTLD----------ESLNKYNGAVDAASTLLGAITS 315 (511)
T ss_pred HHHHHHHHHhcCcc----hhhhhHHHHHHhhHHHHHHHHHHHHHHHcC----------CCccccCCHHHHHHHHHHHHHH
Confidence 00111222222222 122222 22334444555555554432211 0001122344455566667778
Q ss_pred HHHHHHHHHhch--hHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHH
Q 011416 347 LLAAILVDTAGR--KLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAAN 424 (486)
Q Consensus 347 ~~~g~l~dr~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 424 (486)
+..|++-.++.+ ...+.+..++.+..++++...++.|..++..+++........++...-+++....+..|..+|+.+
T Consensus 316 ~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNt 395 (511)
T TIGR00806 316 FIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINT 395 (511)
T ss_pred HHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHH
Confidence 888888655544 234445555566666777778899999999999999988888998888888888887899999988
Q ss_pred HHHHHHHHHHHHH
Q 011416 425 AMGRIGGMVCPLV 437 (486)
Q Consensus 425 ~~~~~g~~~~~~i 437 (486)
.+.-+-..+-..+
T Consensus 396 fvAl~LQtilT~i 408 (511)
T TIGR00806 396 FVATALKTIITAV 408 (511)
T ss_pred HHHHHHHHheEEE
Confidence 8877666665544
No 90
>PTZ00207 hypothetical protein; Provisional
Probab=99.96 E-value=4.8e-27 Score=225.40 Aligned_cols=430 Identities=12% Similarity=0.053 Sum_probs=266.2
Q ss_pred CchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH
Q 011416 20 GKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALV 99 (486)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~ 99 (486)
+.+||..+.......... ...+.++...|.+++++|+|..+++++.++. ..+.+++++.|++.||+|+|+++.++.++
T Consensus 23 e~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 355666655554444333 4455677888999999999999999998874 44566788999999999999999999999
Q ss_pred HHHhhhhhhcC------CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHH-HHHHHHH
Q 011416 100 TAGAGLLSSFS------PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSE-AIGAWII 171 (486)
Q Consensus 100 ~~~~~~~~~~a------~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~-~~l~~~l 171 (486)
+++++++++++ ++++.+++.|++.|+|.+.. +.....+.+|+| ++||++.|+...+.++|.++. ++..+++
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 68999999999999999877 666778889985 789999999999999999864 4444444
Q ss_pred hcCCCcHHHHHHhHHHHHHHHHH-hhcc--CCCchhhhhcCChHHHHHHHHHHHHh------------------------
Q 011416 172 MPRLDWRWLLGLSSIPSFILLAF-LGFQ--PESPRYLCLKGRTAEAHRALEKIAQV------------------------ 224 (486)
Q Consensus 172 ~~~~~w~~~f~~~~~~~~~~~~~-~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 224 (486)
. .+|+..|++.+++.++..++ ..++ |+.+++...+++.+++++..++..+.
T Consensus 180 ~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~ 257 (591)
T PTZ00207 180 S--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIV 257 (591)
T ss_pred H--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHH
Confidence 3 47888888888877776443 3333 33333321222112221111100000
Q ss_pred ------------c--------------------C-CCCCCchhhhcccc-CCC-CCCCCccchhhcccCCC---CCccc-
Q 011416 225 ------------N--------------------K-TKLPNGKLVARRST-LPT-GERAPPELVHLLSSNGG---NKTTE- 265 (486)
Q Consensus 225 ------------~--------------------~-~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~---~~~~~- 265 (486)
+ + -..+........+. +.+ +..+..+........+. ....+
T Consensus 258 yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (591)
T PTZ00207 258 FLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDY 337 (591)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccC
Confidence 0 0 00000000000000 000 00000000000000000 00000
Q ss_pred C-CCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCC-CCch-hHHHHHHHHhhH
Q 011416 266 G-KSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHP-QDAN-LYIDEFITSLAE 342 (486)
Q Consensus 266 ~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~i~~ 342 (486)
. .+...++.+.++ ...+|+++..+++.............++.+... |. ...+ ...+.++.++.+
T Consensus 338 ~~P~~~~t~~q~l~---~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~----------g~~~~~~~~~~~vsL~si~~ 404 (591)
T PTZ00207 338 IAPQFQETFIEGLK---TARLWCLLWSIFCCVGAHFVIIFNARFIYTALA----------GEAPDDALNTLLTVLNGVGS 404 (591)
T ss_pred CCCCCcchHHHHHh---chhHHHHHHHHHHhhCchheeeecHHHHHHHhc----------CCCCCccceeeehhhhhHHH
Confidence 0 000113333332 244555555555544444444444444432210 33 2221 222678889999
Q ss_pred HHHHHHHHHHHHHh---------chhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccc
Q 011416 343 IPGLLLAAILVDTA---------GRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT 413 (486)
Q Consensus 343 ~~~~~~~g~l~dr~---------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (486)
.+|++..|.+.... .|-..+.+..+ +.++.+++....+...+.+..++.|++.|..++.....++|++.
T Consensus 405 ~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg- 482 (591)
T PTZ00207 405 AVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA- 482 (591)
T ss_pred HhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-
Confidence 99999999988322 22223344444 55555555554333577888899999999999999999999999
Q ss_pred cchhhHhHHHHHHHHHHHHHH-HHHHHHHHHhhc-------------cchHHHHHHHHHHHHHHHHhccc
Q 011416 414 SVRSTGAGAANAMGRIGGMVC-PLVAVALVANCH-------------QMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 414 ~~~~~~~g~~~~~~~~g~~~~-~~i~g~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
++-|+-+-+.....-+|..+. -.+.|.++|+.. +..+|++++++++++.+....+.
T Consensus 483 k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 483 KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 888888888888888888777 568888887632 45688888888888877765543
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=9.7e-27 Score=223.92 Aligned_cols=418 Identities=12% Similarity=-0.039 Sum_probs=253.2
Q ss_pred HHHHHHHHHHHHHHhhHhhhh-chhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHH
Q 011416 25 FVLAYAGLGWVAEAMEIMILS-FVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADN-YGRRMGFLGEALVTAG 102 (486)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~~~~~~~~~~~ 102 (486)
+.+..+++..+...+..+... .+...+.+++|++.++.+++.+.+.....+..+++|+++|| +|||+++.++.+++++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 334444455555555544444 44456678899999999999999998888889999999999 9999999999999999
Q ss_pred hhhhhhcCCCHHH-HHHHHHHHHhccCcc-hhhhhhhccccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Q 011416 103 AGLLSSFSPNYIT-LITLRCLVGVGLGSG-HVFLSWFLEFVPPS--NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 103 ~~~~~~~a~~~~~-l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
++++++++++... ++++|+++|+|.|.. +...+++.|.+|++ +|++++++++.+.++|..+||.+++++.++.|||
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 9999999877554 558999999999998 77889999999887 4578999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhccCCCchhhh--hcCChHHHHHHHH----------HHHHhcCCCCCCchhhhccccCCCCCC
Q 011416 179 WLLGLSSIPSFILLAFLGFQPESPRYLC--LKGRTAEAHRALE----------KIAQVNKTKLPNGKLVARRSTLPTGER 246 (486)
Q Consensus 179 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (486)
+.|++.++..++.++.+...++..+... .++++.+...... ....................
T Consensus 174 ~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 246 (489)
T PRK10207 174 VTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLS------- 246 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-------
Confidence 9999865533333333333332211100 0011111111000 00000000000000000000
Q ss_pred CCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCC
Q 011416 247 APPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHP 326 (486)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (486)
......... ++.+. ++.+|++...... +++........+.......+.+.+... .....|.
T Consensus 247 --~i~~~~f~~----~~~~~-------~~~~r~r~~~~~~-l~~~~~~f~~~~~q~~~~l~l~~~~~~-----~~~~~G~ 307 (489)
T PRK10207 247 --IVVTIIFFR----EAFKL-------DKTGRNKMFVAFV-LMLEAVVFYILYAQMPTSLNFFAINNV-----HHEILGF 307 (489)
T ss_pred --HHHHHHHHH----HHhcC-------CHHHHHHHHHHHH-HHHHHHHHHHHHHHcccHHHHHHHHhc-----cccccce
Confidence 000000000 00000 0122222211111 111111111222222122222211000 0011122
Q ss_pred CCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhH-------HHHHHHHHHHHHHHHHh-----h-----hchhHHHHHHH
Q 011416 327 QDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL-------SITIMFTLSCLFLLPLV-----T-----YQSNILTTGLL 389 (486)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~-------~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~ 389 (486)
. ...........+..++..++.+++.||+++|+ .+.+++++.+++++.+. . ..+.+......
T Consensus 308 ~-i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~ 386 (489)
T PRK10207 308 S-INPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVY 386 (489)
T ss_pred E-ECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHH
Confidence 2 12334444555666677888899999999886 36667777666654321 1 12355666778
Q ss_pred HHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH----------hhccchHHHHHHHHHH
Q 011416 390 FGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA----------NCHQMTAVVLLVVVIV 459 (486)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~----------~~g~~~~~~~~~~~~~ 459 (486)
++.+++.....+...+.+.+..|++.+|.++|+.+...++|+.++..+...... ...+...|...+...+
T Consensus 387 ~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 466 (489)
T PRK10207 387 LFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTL 466 (489)
T ss_pred HHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999888764421 1113445556666666
Q ss_pred HHHHHHhccc
Q 011416 460 TSILSVMLIP 469 (486)
Q Consensus 460 ~~~~~~~~~~ 469 (486)
++.++.+...
T Consensus 467 ~~~v~~~~~~ 476 (489)
T PRK10207 467 GVAVVMALMV 476 (489)
T ss_pred HHHHHHHHHH
Confidence 6665555544
No 92
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.1e-26 Score=201.50 Aligned_cols=369 Identities=18% Similarity=0.146 Sum_probs=284.9
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHh
Q 011416 24 CFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGA 103 (486)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 103 (486)
+..+..+.+..+.---....++|+++++.+|+|+|.+..|++.++..+...+.+++..+++.|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44444444444444456677889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHH
Q 011416 104 GLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-DWRWLL 181 (486)
Q Consensus 104 ~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-~w~~~f 181 (486)
.++-... +.+.++.+-.+.|.|.+.. ......+-+.+| |+-+..+|++....++|..+++.+...+.++. +||...
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL 168 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGAL 168 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHH
Confidence 9999887 7888999999999999988 555677878885 67899999999999999999999999998877 799999
Q ss_pred HHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCC
Q 011416 182 GLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGN 261 (486)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (486)
.+.++++++.++.|+.-...++ ......
T Consensus 169 ~~WAl~allAl~~WlPq~~r~~------~~~~~~---------------------------------------------- 196 (395)
T COG2807 169 GFWALLALLALLIWLPQALREQ------AASIAT---------------------------------------------- 196 (395)
T ss_pred HHHHHHHHHHHHHHhhhccccc------cccccc----------------------------------------------
Confidence 9999999888776643211100 000000
Q ss_pred CcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhh
Q 011416 262 KTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLA 341 (486)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 341 (486)
+..+-..+++++. .+.+.+.+..++..+|....|.|.+. .+.|+|+.+++...+...+.
T Consensus 197 -------~~~~~~~vw~~~~---aW~vtLfmGlqS~~~Y~~~~WLP~il-----------i~~G~sa~~aG~llsl~~l~ 255 (395)
T COG2807 197 -------KLVSVRKVWRSPL---AWQVTLFMGLQSLLYYIVIGWLPAIL-----------IDRGLSAAEAGSLLSLMQLA 255 (395)
T ss_pred -------ccccccccccCch---hHHHHHHHHhhHHHHHHHHHHHHHHH-----------HHcCCCHHHhhhHHHHHHHH
Confidence 0001122334432 34455556678899999999999876 56789999999999999999
Q ss_pred HHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccc-cchhhH
Q 011416 342 EIPGLLLAAILVDTA-GRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPT-SVRSTG 419 (486)
Q Consensus 342 ~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 419 (486)
+++..+....+.+|. ++|+.......++.++.+.+.+.+....... .++.|++.++.++.....+.+..+. +..+.-
T Consensus 256 ~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~L 334 (395)
T COG2807 256 QLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAAL 334 (395)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHH
Confidence 999999999999975 4667777777777777777765333222222 5788999999999998888877644 556788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchH-HHHHHHHHHHHHHHHhcc
Q 011416 420 AGAANAMGRIGGMVCPLVAVALVANCHQMTA-VVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 420 ~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 468 (486)
.|+.+.++++-..+||.++|.+.|..|.+.. ...+....++..+.-+..
T Consensus 335 SgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 335 SGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999999999885544 444444444444444444
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.4e-29 Score=218.73 Aligned_cols=345 Identities=17% Similarity=0.069 Sum_probs=252.9
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-h
Q 011416 53 SEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-H 131 (486)
Q Consensus 53 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~ 131 (486)
++.+-+++++|++.+.+.+.+.+.+|+.|.+.||+|+|..+++|++++.++++++++.++|++++++|.+||+|.+.. .
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 445667889999999999999999999999999999999999999999999999999999999999999999999998 7
Q ss_pred hhhhhhccccCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCC
Q 011416 132 VFLSWFLEFVPPS-NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGR 210 (486)
Q Consensus 132 ~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 210 (486)
...+++++.+|++ +|++++|+...+.++|..+||++|+.+.+..|.+.+|++.+++.++-..+.+++-|..+. +
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~-----~ 253 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM-----D 253 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc-----C
Confidence 8889999988775 579999999999999999999999999999999999999999999876665554332110 0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHH
Q 011416 211 TAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWL 290 (486)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 290 (486)
+++. .+..+++.++++++ +..
T Consensus 254 ~~~~-----------------------------------------------------~~~~~~~~Ll~dP~------I~~ 274 (464)
T KOG3764|consen 254 PDST-----------------------------------------------------EQGTPMWSLLMDPY------ILL 274 (464)
T ss_pred cccc-----------------------------------------------------ccCccHHHHHhCch------Hhh
Confidence 0000 00013444444443 122
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhc--hhHHHHHHHHH
Q 011416 291 LLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAG--RKLSITIMFTL 368 (486)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g--~~~~~~~~~~~ 368 (486)
..+...++.....+..|.+.... .+....+..+.++.+...++...++..+.|.+.||++ |......+.+.
T Consensus 275 ~agai~~~n~~lafLePtlslwm-------~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~ 347 (464)
T KOG3764|consen 275 IAGAITFSNSSLAFLEPTLSLWM-------LETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLAT 347 (464)
T ss_pred hhcchhhccchHHHhCcccHHHH-------HHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHH
Confidence 22222233333344444333111 1223334447888899999999999999999999999 54444555555
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh---hHhhhcccccccc---chhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 369 SCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT---VSLIYAAEIYPTS---VRSTGAGAANAMGRIGGMVCPLVAVALV 442 (486)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~~~~i~g~l~ 442 (486)
.+++.....+.++...+++..+..+++.+.... ....+..|.-..+ .-|..+++......+|.++||.+.|.++
T Consensus 348 ~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv 427 (464)
T KOG3764|consen 348 VGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLV 427 (464)
T ss_pred HHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhe
Confidence 555555555666555555444444444433333 2333333333233 5688999999999999999999999999
Q ss_pred HhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 443 ANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 443 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
+..|+.+...+.+...++..-+..++
T Consensus 428 ~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 428 EAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888887776555544
No 94
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=6.3e-27 Score=225.78 Aligned_cols=335 Identities=13% Similarity=0.031 Sum_probs=237.7
Q ss_pred chhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhh----hcch-HHHHHHHHHHHHhhhhhhcCCC------HH
Q 011416 46 FVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADN----YGRR-MGFLGEALVTAGAGLLSSFSPN------YI 114 (486)
Q Consensus 46 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~G~r-~~~~~~~~~~~~~~~~~~~a~~------~~ 114 (486)
...+.+.+++|+++.++|++.++..+..++..|+.|+++|| +||| +.++.+....+++.+++.+.++ ..
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 35566788899999999999999999999999999999997 6774 4677788888888888777664 45
Q ss_pred HHHHHHHHHHhccCcc-hhhhhhhcccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCcHHHHHHhH
Q 011416 115 TLITLRCLVGVGLGSG-HVFLSWFLEFV-PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM-------PRLDWRWLLGLSS 185 (486)
Q Consensus 115 ~l~~~r~l~G~~~~~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~-------~~~~w~~~f~~~~ 185 (486)
.+++.+++.+++.+.. .+..++..|.. +++||++..++.+.+..+|..+++.+.+.+. +..+||..+.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 6677888888888877 56667888877 5689999999999999998888777665554 2468999999988
Q ss_pred HHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcc
Q 011416 186 IPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTT 264 (486)
Q Consensus 186 ~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (486)
+++++..+. .+..+|+++.. ++.++
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~~---~~~~~--------------------------------------------------- 206 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSEI---PKNIE--------------------------------------------------- 206 (437)
T ss_pred HHHHHHHHHHHcCCEecCCCC---Ccccc---------------------------------------------------
Confidence 887776444 45556543110 00000
Q ss_pred cCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHH
Q 011416 265 EGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIP 344 (486)
Q Consensus 265 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 344 (486)
++.+....++.+++++..+.... ..+.....++....+.+.+.+ ...+ ++...+.......++.++
T Consensus 207 ~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~i~~ii 272 (437)
T TIGR00792 207 KKLSLKQIFKALFKNDQLLILCL---AYLFYNLAFNIKNGVQVYYFT----------YVLG-DPELFSYMGSIAIVAGLI 272 (437)
T ss_pred cCCCHHHHHHHHhCCHHHHHHHH---HHHHHHHHHHHHcchhheeEe----------eecC-ChHHHHHHHHHHHHHHHH
Confidence 00000114455555554333222 222222223322222332221 1122 344556666777899999
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-chhHHHHHHHHHHHHhhhhhhhhHhhhcccccc-------ccch
Q 011416 345 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYP-------TSVR 416 (486)
Q Consensus 345 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 416 (486)
+.++.+++.||+|+|+.+..+..+.+++.+.+.+. ++.+...+..++.+++.+...+..+++.+|..+ ++.+
T Consensus 273 ~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (437)
T TIGR00792 273 GVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAE 352 (437)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccch
Confidence 99999999999999999988888877777666553 344455556667778888888888888888764 5567
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011416 417 STGAGAANAMGRIGGMVCPLVAVALVANCHQM 448 (486)
Q Consensus 417 ~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~ 448 (486)
|.++|+.+....+|..+++.+.|.+.+..|+.
T Consensus 353 G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 353 GLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999987753
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=4.9e-26 Score=215.70 Aligned_cols=367 Identities=12% Similarity=-0.035 Sum_probs=248.8
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHH--HHHHHHHHHHHHHHHhh-hhhhhcchHHHHHHHHH-HHH
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLI--TTSVFAGLVVGAYAWGL-VADNYGRRMGFLGEALV-TAG 102 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~~~~~i~~~~~g~-l~dr~G~r~~~~~~~~~-~~~ 102 (486)
+..++..++.++.......+.+|.+.+|.|.|.+++|++ .++..+...+.+|+++. ..||+||||..++.+.+ .++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455667789999999999999999999999999999997 46778888888998855 79999999887555433 222
Q ss_pred hhhhhh---cCCC-HHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 103 AGLLSS---FSPN-YITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 103 ~~~~~~---~a~~-~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
.....+ ...+ ...++..-++.++..+.. +...++..|..++++++...+....+..+|.++|+...+.+.+..||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 2323 333444445555555555 56667788888888889889999999899999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhccc
Q 011416 178 RWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSS 257 (486)
Q Consensus 178 ~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (486)
|..|++.+++.++..+..++++|+++.. ++++++.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~--~~~~~~~------------------------------------------- 197 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVAS--PEAPLAR------------------------------------------- 197 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCc--cccchhh-------------------------------------------
Confidence 9999999988777655545554432110 0000000
Q ss_pred CCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHH
Q 011416 258 NGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFI 337 (486)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (486)
..+.++++|++..+......++........+ .+.+.+. .+.|.++.+.+.....
T Consensus 198 ------------~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~l-----------~~~G~s~~~ig~~~~~ 251 (390)
T TIGR02718 198 ------------RASLFRFFRRPLAWSLLALALLSAMTAVSGF---GLSKLYL-----------VDAGWPLEWIGRLGMA 251 (390)
T ss_pred ------------HHHHHHHHcCcCHHHHHHHHHHHHHHHHHHH---HHhhHHH-----------HhcCCCHHHHHHHHhH
Confidence 0033444555443433333333322222222 2223222 3458999999998877
Q ss_pred HHh-hHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh------hchhHHHHHHHHHHHHhhhhhhhhHhhhcccc
Q 011416 338 TSL-AEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT------YQSNILTTGLLFGARMCVMGAFTVSLIYAAEI 410 (486)
Q Consensus 338 ~~i-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (486)
.++ ..+++.++.|++.||+|+|+.+..+..+.++..+.... ..+.........+.++..+...+...+...+.
T Consensus 252 ~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 331 (390)
T TIGR02718 252 GGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRF 331 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 764 56677899999999999999888776655333222221 11222223333344455566667777776677
Q ss_pred ccc-cchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q 011416 411 YPT-SVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILS 464 (486)
Q Consensus 411 ~~~-~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 464 (486)
.++ +.+++.+++.+...++|..++|.+.|.++|..|+...|...+++.+++...
T Consensus 332 ~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 332 AGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred hCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 665 789999999999999999999999999999999888888777766665444
No 96
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=2e-27 Score=234.88 Aligned_cols=372 Identities=12% Similarity=0.080 Sum_probs=258.8
Q ss_pred HHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhh
Q 011416 28 AYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLS 107 (486)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 107 (486)
+..++..+.........+..++.++++|+++..+.|++.+.+.+++.++.++.|+++||+|||+++.++.++++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44445677777888899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCC---------------------------------------------------CHHHHHHHHHHHHhccCcc-hhhhh
Q 011416 108 SFSP---------------------------------------------------NYITLITLRCLVGVGLGSG-HVFLS 135 (486)
Q Consensus 108 ~~a~---------------------------------------------------~~~~l~~~r~l~G~~~~~~-~~~~~ 135 (486)
++.+ .+..++++|+++|+|.+.. +...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 7753 2556789999999999998 78889
Q ss_pred hhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC----------------------CcHHHHHHhHHHHHHHHH
Q 011416 136 WFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL----------------------DWRWLLGLSSIPSFILLA 193 (486)
Q Consensus 136 ~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~----------------------~w~~~f~~~~~~~~~~~~ 193 (486)
++.|++|+++|+++++++..+..+|.++|+++++.+.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887532 277788888888877666
Q ss_pred HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhh
Q 011416 194 FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF 273 (486)
Q Consensus 194 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (486)
.++++|++.+....+.+.+..++. ..+. .+.+.+ .......+.....+
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~-----~~~~----------------~~~~~~-----------~~~~~~~~~~~~~~ 323 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETE-----KLEK----------------SEDKSR-----------KKNSDITKDFPKII 323 (633)
T ss_pred HHHhCccccCCcccccchhhhhhh-----cccc----------------cccccc-----------hhhhhhHHHHHHHH
Confidence 666677653211000000000000 0000 000000 00000001112245
Q ss_pred HhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHh-hHHHHHHHHHHH
Q 011416 274 LMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSL-AEIPGLLLAAIL 352 (486)
Q Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~g~l 352 (486)
+.+++++. ++...+..+.....+++...+.|.+.+ ..++.++.++++......+ +.+++.+++|++
T Consensus 324 ~~Ll~n~~---f~~~~l~~~~~~~~~~~~~~~lP~yl~----------~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l 390 (633)
T TIGR00805 324 KRLLCNPI---YMLVILAQVIDSLAFNGYITFLPKYLE----------NQYGISSAEANFLIGVVNLPAAGLGYLIGGFI 390 (633)
T ss_pred HHHHcCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHcCCcHHHHHHHhhhhhhhHHHHHHhhhhhe
Confidence 55666543 333444444455566666667776652 3458899999988877766 568999999999
Q ss_pred HHHhc--hhHHHHHHHHHHHHHHHHHh------------------------------h-------hc-------------
Q 011416 353 VDTAG--RKLSITIMFTLSCLFLLPLV------------------------------T-------YQ------------- 380 (486)
Q Consensus 353 ~dr~g--~~~~~~~~~~~~~~~~~~~~------------------------------~-------~~------------- 380 (486)
+||++ .|+.+..+.++..+..+... . ..
T Consensus 391 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~t 470 (633)
T TIGR00805 391 MKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLA 470 (633)
T ss_pred eeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCE
Confidence 99987 45666555555555433311 0 00
Q ss_pred ---------------------------------------------h-hHHHHHHHHHHHHhhhhhhhhHhhhcccccccc
Q 011416 381 ---------------------------------------------S-NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 414 (486)
Q Consensus 381 ---------------------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (486)
. ...+++..++..+..+..........-+.+|++
T Consensus 471 Y~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~ 550 (633)
T TIGR00805 471 YLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPE 550 (633)
T ss_pred EECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcc
Confidence 0 011112222222333333445666778889999
Q ss_pred chhhHhHHHHHHHH-HHHHHHHHHHHHHHHh
Q 011416 415 VRSTGAGAANAMGR-IGGMVCPLVAVALVAN 444 (486)
Q Consensus 415 ~~~~~~g~~~~~~~-~g~~~~~~i~g~l~~~ 444 (486)
+|+.+.|+...+.. +|.+.+|+++|++.|.
T Consensus 551 ~rs~alg~~~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 551 EKSLAIGLQWLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred cchHHhhHHHHHHHHhcCCChhHHHhhhhhc
Confidence 99999999987765 7889999999999985
No 97
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.96 E-value=1.6e-25 Score=213.29 Aligned_cols=388 Identities=19% Similarity=0.183 Sum_probs=253.8
Q ss_pred HHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcC
Q 011416 31 GLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFS 110 (486)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a 110 (486)
++.....++.....+..++.+..|+|- .....|+.+.+.++..++.++.|+++|.||||++++.+.++..+|+++++.+
T Consensus 50 ~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA 128 (599)
T PF06609_consen 50 SLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA 128 (599)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC
Confidence 333344455556667778899999985 4788999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHH
Q 011416 111 PNYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFI 190 (486)
Q Consensus 111 ~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~ 190 (486)
+|...++++..+.|+|.|........++|..|.|.|+...++.....-....+++.++..+..+.+|||.|++.++...+
T Consensus 129 ~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i 208 (599)
T PF06609_consen 129 QNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGI 208 (599)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHH
Confidence 99999999999999998777555566889999999998887777666566667788887777778999999999887666
Q ss_pred HHHHhhccCCCchhhhhcCChHHHHHHHHHHHH----------------hcCCCCCCchhhhccccCCCCCCCCccchhh
Q 011416 191 LLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQ----------------VNKTKLPNGKLVARRSTLPTGERAPPELVHL 254 (486)
Q Consensus 191 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (486)
.++..+++-.+|++.+.++++...++.++++.- .+-...+. .+....+. ....
T Consensus 209 ~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~----------~~W~Sa~V-Ia~l 277 (599)
T PF06609_consen 209 ALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPY----------YPWKSAHV-IAPL 277 (599)
T ss_pred HHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCC----------CCCCCccc-hhhH
Confidence 544322222222222222221111222222210 00000000 00000000 0000
Q ss_pred cc------cCCCCCccc-CCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCC
Q 011416 255 LS------SNGGNKTTE-GKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQ 327 (486)
Q Consensus 255 ~~------~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (486)
.. -..-.|... .+.+..+.+ +++++ |.+....+..+.....+|....+.|..... .++.+
T Consensus 278 viG~~~Lv~F~~wE~~~~~~~Pl~P~~-Lf~~~--r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~----------vf~~d 344 (599)
T PF06609_consen 278 VIGFVLLVAFVVWEWFGAPKDPLFPHR-LFKDR--RGFAALLVISFISGMNFFSVNILWPQQVVN----------VFGSD 344 (599)
T ss_pred HHHHHHHHHHHHhhhhccCCCCcCCHH-Hhccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------hccCC
Confidence 00 000011111 112222333 44332 233333444444555566665555543311 11222
Q ss_pred C---chhHHHHHHHHhhHHHHHHHHHHHHHHhchhHH-HHHHHHHHHHHHHHHhh--hchhHHHHHHHHHHHHhhhhhhh
Q 011416 328 D---ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLS-ITIMFTLSCLFLLPLVT--YQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 328 ~---~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
+ ...++.....+++..+|.++.|.+..+++|-|. ++++..++.+++..+.. .++....+...++.+++.+....
T Consensus 345 ~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~ 424 (599)
T PF06609_consen 345 PISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILV 424 (599)
T ss_pred CcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHH
Confidence 2 346677778888888999999999998887544 45666666555444443 33444556777788888888888
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 443 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~ 443 (486)
.......-..|++.-|++.|+..++..+|+.++..+...+..
T Consensus 425 ~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 425 PAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 888888888999999999999999999999999988866654
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.95 E-value=1.8e-25 Score=216.44 Aligned_cols=411 Identities=11% Similarity=-0.029 Sum_probs=240.6
Q ss_pred HHHHHHHHHhhHhhhhchh-chhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHhhhhh
Q 011416 30 AGLGWVAEAMEIMILSFVG-PTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADN-YGRRMGFLGEALVTAGAGLLS 107 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~ 107 (486)
+++..+...+..+.+...+ ..+.+++|++.++.+++.+.+........+++|+++|| +|||+++..+.++.+++..++
T Consensus 26 ~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~ 105 (500)
T PRK09584 26 IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV 105 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 3344444544444444444 44568899999999999988877767777899999999 599999999999999999999
Q ss_pred hcCC-CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 011416 108 SFSP-NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSN--RGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGL 183 (486)
Q Consensus 108 ~~a~-~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~ 183 (486)
++++ +.+.+.+.|+++|++.|.. +...+++.|++|+++ |..++++++.+.++|..++|.+++++.+..|||+.|.+
T Consensus 106 ~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i 185 (500)
T PRK09584 106 AWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFAL 185 (500)
T ss_pred HHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 8874 5667778899999999988 777789999998654 45678999999999999999999999999999999998
Q ss_pred hHHHHHHHHHH----hhccCCCchhhhhcCChHHHHHHHH--------HHHHhcCCCCCCchhhhccccCCCCCCCCccc
Q 011416 184 SSIPSFILLAF----LGFQPESPRYLCLKGRTAEAHRALE--------KIAQVNKTKLPNGKLVARRSTLPTGERAPPEL 251 (486)
Q Consensus 184 ~~~~~~~~~~~----~~~~~e~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (486)
.++..++.++. ...++|.++.. .+++.+....... -........ + +..... . ..
T Consensus 186 ~~i~~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~-~---------~~ 251 (500)
T PRK09584 186 SVVGMLITVVNFAFCQRWVKQYGSKP-DFEPINYRKLLLTIVGVVALIAIATWLLHN-Q--EIARMA-L---------GV 251 (500)
T ss_pred HHHHHHHHHHHHHHhHHHhccCCCCC-CccccchhhHHHHHHHHHHHHHHHHHHHhc-c--hHHHHH-H---------HH
Confidence 77644443322 22233321100 0000111000000 000000000 0 000000 0 00
Q ss_pred hhhcccCCCCCcccCCCchhhhHh--hhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCc
Q 011416 252 VHLLSSNGGNKTTEGKSGLSLFLM--LFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDA 329 (486)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (486)
...... ....++ ..++..+++.+.... .+.....+|......+.......... .-....|. ..
T Consensus 252 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~-~~~~~~g~-~i 316 (500)
T PRK09584 252 VALGIV------------VIFGKEAFAMKGAARRKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRN-VEHSILGI-AV 316 (500)
T ss_pred HHHHHH------------HHHHHHHhhcCHHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHh-ccccccce-EE
Confidence 000000 000000 001111122222221 12222333333332222211000000 00000111 12
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHH----HhchhHHHHHHHHHHHHHHHHHhhhch---------hHHHHHHHHHHHHhh
Q 011416 330 NLYIDEFITSLAEIPGLLLAAILVD----TAGRKLSITIMFTLSCLFLLPLVTYQS---------NILTTGLLFGARMCV 396 (486)
Q Consensus 330 ~~~~~~~~~~i~~~~~~~~~g~l~d----r~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 396 (486)
..+.......+..++..++.+++-+ |.+..+.+.+++++.+++++.+..... .++.....++.+++.
T Consensus 317 ~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge 396 (500)
T PRK09584 317 EPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGE 396 (500)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHH
Confidence 2445556666666666666644444 445557788889999998888765332 346777788889999
Q ss_pred hhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH----------hhccchHHHHHHHHHHHHHHHHh
Q 011416 397 MGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA----------NCHQMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~ 466 (486)
....|...+++.+..|++.||+++|+......+|..++..+.+.... ..++...|...++..++.+++.+
T Consensus 397 ~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 397 LMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred HHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997776666666666555542210 11244566666666555554444
Q ss_pred ccc
Q 011416 467 LIP 469 (486)
Q Consensus 467 ~~~ 469 (486)
...
T Consensus 477 ~~~ 479 (500)
T PRK09584 477 LTA 479 (500)
T ss_pred HHH
Confidence 443
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.94 E-value=2.1e-23 Score=196.48 Aligned_cols=394 Identities=14% Similarity=0.035 Sum_probs=258.3
Q ss_pred HHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhh----hhcchHHHHHH-HHHHHHhhhhh
Q 011416 33 GWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVAD----NYGRRMGFLGE-ALVTAGAGLLS 107 (486)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~r~~~~~~-~~~~~~~~~~~ 107 (486)
..+-..+......+..+.+.+++|.+..+.+++..+..+...+.+|+.|.++| |+||||.++++ ....+++.++.
T Consensus 12 ~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll 91 (477)
T TIGR01301 12 VAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI 91 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 33444555666667777788999999999999999999999999999999999 59999998874 66677777788
Q ss_pred hcCCCHHH-----------------HHHHHHHHHhccCcc-hhhhhhhccccCCCch--hHHHHHHHHHHHHHHHHHHHH
Q 011416 108 SFSPNYIT-----------------LITLRCLVGVGLGSG-HVFLSWFLEFVPPSNR--GMWMVIFSSFWTIGSVSEAIG 167 (486)
Q Consensus 108 ~~a~~~~~-----------------l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~i~~~l 167 (486)
+++++.+. ++++-.+..++.... .+..+++.|.+|+++| +.+.++.+.+.++|.++|+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~ 171 (477)
T TIGR01301 92 GFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA 171 (477)
T ss_pred HhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776532 222333344466655 6677899999998865 689999999999999999999
Q ss_pred HHHH--hcCC-------------CcHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCC
Q 011416 168 AWII--MPRL-------------DWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPN 231 (486)
Q Consensus 168 ~~~l--~~~~-------------~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (486)
++.. .+.+ +.|..|++.++..++. ++..+..+|.|.... ++.++ +. . +
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~--~~~~~--~~---~---~------ 235 (477)
T TIGR01301 172 GAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGS--DDFIN--SE---A---A------ 235 (477)
T ss_pred HHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcc--ccchh--hh---c---c------
Confidence 9875 2211 5788999888777765 445666788753110 00000 00 0 0
Q ss_pred chhhhccccCCCCCCCCccchhhcccCCCCCcccCCCc-hhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011416 232 GKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSG-LSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELS 310 (486)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (486)
+. ++.+.... ..-++.+++-+ +.+..++...+..-+.++.+..|.+.+.
T Consensus 236 ------------~~----------------~~~~~~~~~~~i~~~~~~mP--~~m~~l~~vqffsW~a~f~~~~y~T~~v 285 (477)
T TIGR01301 236 ------------PP----------------SKHGEEAFFGELFGAFKYLP--RPVWILLLVTCLNWIAWFPFILFDTDWM 285 (477)
T ss_pred ------------cc----------------cccchhhhHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 00 00000000 01222222211 2223333344433334444444433332
Q ss_pred ccc-ccCCCCccccCCCCC--chhHHHHHHHHhhHHHHHHHHHHHHHHhch-hHHHHHHHHHHHHHHHHHhhhch-----
Q 011416 311 SLD-TRCRSPLMFSHHPQD--ANLYIDEFITSLAEIPGLLLAAILVDTAGR-KLSITIMFTLSCLFLLPLVTYQS----- 381 (486)
Q Consensus 311 ~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~~~~~~~----- 381 (486)
... ...+.. +...++. ....+.....++...+.+++..++.+|+|+ |....++.++.+++++...+..+
T Consensus 286 g~~v~~~~~~--~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~ 363 (477)
T TIGR01301 286 GREVYGGSVN--QGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNS 363 (477)
T ss_pred HHHHcCCCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 110 000000 0000000 012344455666667777888999999985 67778888888888777764221
Q ss_pred ----------------hHHHHHHHHHHHHhhhhhhhhHhhhccccccc--cchhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 382 ----------------NILTTGLLFGARMCVMGAFTVSLIYAAEIYPT--SVRSTGAGAANAMGRIGGMVCPLVAVALVA 443 (486)
Q Consensus 382 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~ 443 (486)
.+...+...+.|+.....+.+.++++++..++ +..|..+|+.|.+..+.+.+.....|.+.+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~ 443 (477)
T TIGR01301 364 RYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQ 443 (477)
T ss_pred ccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 25667778888999999999999999999984 456999999999999999999999998777
Q ss_pred hhc--cchHHHHHHHHHHHHHHHHhcccccccC
Q 011416 444 NCH--QMTAVVLLVVVIVTSILSVMLIPFETKG 474 (486)
Q Consensus 444 ~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (486)
..| ...++.+.++..++++++.++..|+.+.
T Consensus 444 ~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 444 LFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 666 3456667777888888888888776553
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=4.1e-23 Score=192.44 Aligned_cols=371 Identities=17% Similarity=0.161 Sum_probs=251.7
Q ss_pred HHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhc-chHHHHHHHHHHHHhhhhhhc
Q 011416 31 GLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYG-RRMGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G-~r~~~~~~~~~~~~~~~~~~~ 109 (486)
...+++.+.......|..+.+.++.|.|..|+|.+.++..+...++++++|.++||++ +|+++.+..++.++.......
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666667777788889999999999999999999999999999999999999986 578888888888887777788
Q ss_pred CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHH-HHHHhcCCC---cHHHHHHh
Q 011416 110 SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIG-AWIIMPRLD---WRWLLGLS 184 (486)
Q Consensus 110 a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l-~~~l~~~~~---w~~~f~~~ 184 (486)
.++++.+++..++..+..... +...++..+... ++++-.|-.....++|.+++... +..+....+ ....+++.
T Consensus 88 ~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~ 165 (400)
T PF03825_consen 88 SSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIA 165 (400)
T ss_pred hccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHH
Confidence 889998888888888776655 555555555553 23334445555666666665433 222222222 33455666
Q ss_pred HHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcc
Q 011416 185 SIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTT 264 (486)
Q Consensus 185 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (486)
+..+++.....+.+|+.|+....+++.++
T Consensus 166 ~~~~~ll~~~~l~lp~~~~~~~~~~~~~~--------------------------------------------------- 194 (400)
T PF03825_consen 166 AILSLLLAGFALFLPKTPPKRSAKESVKK--------------------------------------------------- 194 (400)
T ss_pred HHHHHHHHHHHHhCCCCccccccCCCccc---------------------------------------------------
Confidence 66555555556667877621100000000
Q ss_pred cCCCchhhhHhhhchhhHHHHHHHHHHHH-HHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHH
Q 011416 265 EGKSGLSLFLMLFSSKLARTTILLWLLLF-GNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEI 343 (486)
Q Consensus 265 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 343 (486)
....+...++|++....+++...... .....+.....+..+.. +.+....+....+..++.+
T Consensus 195 ---~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~g--------------g~~~~~~g~~~~l~~~aEi 257 (400)
T PF03825_consen 195 ---LLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELG--------------GYSGSTIGILWALGVVAEI 257 (400)
T ss_pred ---ccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------------cchhhHHHHHHHHHHHHHH
Confidence 00002223444444344433333322 23333322233333221 2566777877888889999
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-chhHHHHHHH----HHHHHhhhhhhhhHhhhccccccccchhh
Q 011416 344 PGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-QSNILTTGLL----FGARMCVMGAFTVSLIYAAEIYPTSVRST 418 (486)
Q Consensus 344 ~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (486)
+.-...+++.+|+|.++++.++.+..++=..++... ++.+...... .+.|...+..+.....++.+..|++.|++
T Consensus 258 ~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at 337 (400)
T PF03825_consen 258 PFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRAT 337 (400)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHH
Confidence 999999999999999999999999999988888775 4444433333 35788888899999999999999999999
Q ss_pred HhHHHHHHH-HHHHHHHHHHHHHHHHhhccch------HHHHHHHHHHHHHHHHhccccc
Q 011416 419 GAGAANAMG-RIGGMVCPLVAVALVANCHQMT------AVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 419 ~~g~~~~~~-~~g~~~~~~i~g~l~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
++++++... .+|..+|..+.|+++|+.|... .+.+.+++.++..++.+++.|+
T Consensus 338 ~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 338 AQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999998875 6999999999999999987553 3344444445555555555433
No 101
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.93 E-value=4.1e-24 Score=205.30 Aligned_cols=369 Identities=11% Similarity=0.034 Sum_probs=248.0
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhc-----chHHHHHHHH
Q 011416 24 CFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYG-----RRMGFLGEAL 98 (486)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G-----~r~~~~~~~~ 98 (486)
...+.++...++..++.........|.+.+++|+|.++++...+...+...+-.+ +|.++||++ ||+.++++.+
T Consensus 25 ~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred chHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 3455556667788887744444566667778999999999999999999999655 999999998 7777888877
Q ss_pred HH-HHhhhhhhcCCCHHHHH-HHHHHHHhccCcc-hhhhhhhccccCCCchhHH---HHHHHHHHHHHHHHHHHHHHHHh
Q 011416 99 VT-AGAGLLSSFSPNYITLI-TLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMW---MVIFSSFWTIGSVSEAIGAWIIM 172 (486)
Q Consensus 99 ~~-~~~~~~~~~a~~~~~l~-~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~G~~i~~~l~~~l~ 172 (486)
+. +++....+..++..... +.+++.+++.+.. .+.-++..|..+ +++... .+......++|.++++.+++.+.
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 76 34444445555654444 4888999999888 777799999987 444443 33444445689999999999999
Q ss_pred cCCCcHHHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccch
Q 011416 173 PRLDWRWLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELV 252 (486)
Q Consensus 173 ~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (486)
+.++||..|++.+++.++..+...+++|++.....+.++++ .........
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~-~~~~~~~~~----------------------------- 232 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYL-EMNMALLTL----------------------------- 232 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccc-hhhhhhhhh-----------------------------
Confidence 99999999999888877776666777876311000000000 000000000
Q ss_pred hhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchh
Q 011416 253 HLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLL-LFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL 331 (486)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (486)
......+......+..++++..+..+...++ +. ..+....... .......|.++...
T Consensus 233 --------~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~-----------~~~~~~~~~f---~~~~~~lG~s~~~~ 290 (468)
T TIGR00788 233 --------GVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYA-----------NLPGASGSVF---CATTQCLPGGPSFS 290 (468)
T ss_pred --------hHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHh-----------hcCCCCceeE---EEEcccCCCCcchh
Confidence 0000000000122222333322222221111 11 0010000000 01113568999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh----------chhHHHHHHHHHHHHhhhhhhh
Q 011416 332 YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY----------QSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
|......+++.+++..+.+++.+|++.|+.+.++.++.+++.+..... .+.+.......+.+++.+..+.
T Consensus 291 G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~ 370 (468)
T TIGR00788 291 GMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFM 370 (468)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHc
Confidence 999999999999999999999999999999999988888876553210 2233344455666777777778
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH 446 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g 446 (486)
....++.+..|++.+|+.+++.+.+.++|..+++.++|.+.+..|
T Consensus 371 ~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 371 PFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 889999999999999999999999999999999999999999888
No 102
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.93 E-value=5.2e-23 Score=187.57 Aligned_cols=380 Identities=13% Similarity=0.088 Sum_probs=245.4
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH--Hhh-h
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSE-WNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTA--GAG-L 105 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~--~~~-~ 105 (486)
..+.+++.++.....-+..|.+.++ .|+|.+|+|.+.++..+...+.+|+.|.++||.|.||-++....... .+. .
T Consensus 12 ~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff 91 (412)
T PF01306_consen 12 LSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFF 91 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 3445556666677777788877765 89999999999999999999999999999999997776554433222 222 2
Q ss_pred hhhcC----CCHH-HHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 011416 106 LSSFS----PNYI-TLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRW 179 (486)
Q Consensus 106 ~~~~a----~~~~-~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~ 179 (486)
...+. .|.+ ..+++-+..|+..... ++.-+++.++. ++.+.-.|-.....++|.+++..++|.+.+ .+-+.
T Consensus 92 ~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~ 168 (412)
T PF01306_consen 92 IYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNI 168 (412)
T ss_dssp HHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccH
Confidence 22222 2322 1222222223332222 33334443333 334455677788889999999999999876 45567
Q ss_pred HHHHhHHHHHHHHHHhhcc-CCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccC
Q 011416 180 LLGLSSIPSFILLAFLGFQ-PESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSN 258 (486)
Q Consensus 180 ~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (486)
.|++....+++..++.... |+.++....++..++
T Consensus 169 ~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~--------------------------------------------- 203 (412)
T PF01306_consen 169 IFWIASAAAIILLLLLLLLKPDVPPQAEVADALGA--------------------------------------------- 203 (412)
T ss_dssp HHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS---------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCchhhhhhccccc---------------------------------------------
Confidence 7887766665554443333 333221111100000
Q ss_pred CCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHH----HHHHHhhhccccccCCCCccccCCCCCchhHHH
Q 011416 259 GGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYA----VVLLISELSSLDTRCRSPLMFSHHPQDANLYID 334 (486)
Q Consensus 259 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (486)
++++...+...++++.+. ++.+.+........++. ...+...+. +..+.++...|..
T Consensus 204 -----~~~~~~~~~~~~l~k~~~---fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f-----------~~~~~g~~~~G~l 264 (412)
T PF01306_consen 204 -----KKDKVSLKDVLSLFKMRN---FWFFVLFVIGVAAIYDVFDQQFPIYFASFF-----------QSAGQGNQMYGYL 264 (412)
T ss_dssp -----------HHHHHHHTTSHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-----------SSHHHHHHHHHHH
T ss_pred -----CCCCCcHHHHHHHhcchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------cccccChhHHhHH
Confidence 000001113334444443 33333332222222222 223333222 2223455667888
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhcccccccc
Q 011416 335 EFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 414 (486)
Q Consensus 335 ~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (486)
.+...+..++...+.+++.+|+|.|+.+.++..++++=.+...+.++++.....-.+.++-.........-++.+.+|++
T Consensus 265 ~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r 344 (412)
T PF01306_consen 265 WSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR 344 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHhHHH-HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCCC
Q 011416 415 VRSTGAGAA-NAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQE 476 (486)
Q Consensus 415 ~~~~~~g~~-~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (486)
..++.+.+. +...+++..+.+.+.|.++|+.|+..++++++.+.+...++..+..++.+++.
T Consensus 345 lsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 345 LSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp GHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 999999986 56678999999999999999999998999999888888777777765554433
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.93 E-value=1.5e-22 Score=195.02 Aligned_cols=331 Identities=11% Similarity=-0.008 Sum_probs=219.6
Q ss_pred chhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhh----hcch-HHHHHHHHHHHHhhhhhhcCCC------HH
Q 011416 46 FVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADN----YGRR-MGFLGEALVTAGAGLLSSFSPN------YI 114 (486)
Q Consensus 46 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~G~r-~~~~~~~~~~~~~~~~~~~a~~------~~ 114 (486)
.+.+.+.+++|++..++|.+.++..+..++..|+.|.++|| +||| +.++.+....+++..+....++ ++
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 44566788899999999999999999999999999999998 7774 5566777777777766555543 34
Q ss_pred HHHHHHHHHHhccCcc-hhhhhhhcccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCcHHHHHHhH
Q 011416 115 TLITLRCLVGVGLGSG-HVFLSWFLEFV-PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP-------RLDWRWLLGLSS 185 (486)
Q Consensus 115 ~l~~~r~l~G~~~~~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~-------~~~w~~~f~~~~ 185 (486)
.+++..++.+.+.... .+..++..|+. ++++|++..++...+..+|..+++.+...+.. ..+|+..+.+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 5566666666665555 55567888988 56889999898888888888887765544332 347888888877
Q ss_pred HHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcc
Q 011416 186 IPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTT 264 (486)
Q Consensus 186 ~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (486)
+++++..+. ++..+|.++.. ++++
T Consensus 191 ii~~v~~~~~~~~~~e~~~~~--~~~~----------------------------------------------------- 215 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTPE--VDNS----------------------------------------------------- 215 (444)
T ss_pred HHHHHHHHHHhCCeEEecCCC--CcCC-----------------------------------------------------
Confidence 777665443 33344432100 0000
Q ss_pred cCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHH
Q 011416 265 EGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIP 344 (486)
Q Consensus 265 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 344 (486)
.+....++.+++++.++......+........... ....+.+ ....++...+.......+..++
T Consensus 216 --~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~---~~~y~~~-----------~~~~~~~~~~~~~~~~~i~~ii 279 (444)
T PRK09669 216 --SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGG---ATLYYVN-----------YVLLRPDLATLFLVTGMIAGLF 279 (444)
T ss_pred --CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh---hhheeee-----------eecCCHHHHHHHHHHHHHHHHH
Confidence 00011455566666544443333222111111111 1121111 0111223333444555677788
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh--hchhHHHHHHHHHHHHhhhhhhhhHhhhcccccc-------ccc
Q 011416 345 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYP-------TSV 415 (486)
Q Consensus 345 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 415 (486)
+.++.+++.||+|+|+....+.++.++..+.+.. .++.+...+..++.+++.+...+..+++.+|..+ ++.
T Consensus 280 ~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~ 359 (444)
T PRK09669 280 GALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRL 359 (444)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCc
Confidence 8899999999999999988777665543332222 3445556666677888888888999999988874 344
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011416 416 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 416 ~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
.|..+|..+.+..+|..+++.+.|.+.+..|+
T Consensus 360 ~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 360 DGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 57788999999999999999999999998876
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.92 E-value=8.2e-21 Score=180.35 Aligned_cols=348 Identities=15% Similarity=0.123 Sum_probs=242.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHH-HHHHHHHhhhhhhcC-CC-HHHHHHHHHHHHhccCcc-hhhhhh
Q 011416 61 EESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLG-EALVTAGAGLLSSFS-PN-YITLITLRCLVGVGLGSG-HVFLSW 136 (486)
Q Consensus 61 ~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~-~~~~~~~~~~~~~~a-~~-~~~l~~~r~l~G~~~~~~-~~~~~~ 136 (486)
..++..++..+..++..|+.|.++|+-|+||.++. ...+..+++.++.+. ++ ++...+.-++.-++.+.. ....++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778899999999999999999999987665554 555555666666664 44 444444444444555555 445588
Q ss_pred hccccCCCch--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCcHHHHH
Q 011416 137 FLEFVPPSNR--------------------------GMWMVIFSSFWTIGSVSEAIGAWIIMPR--------LDWRWLLG 182 (486)
Q Consensus 137 i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~i~~~l~~~l~~~--------~~w~~~f~ 182 (486)
+.|..+++++ ++..+.-.+...+|.++...+...+... .+-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999998888 9999999999999998887776655321 23588888
Q ss_pred HhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCC
Q 011416 183 LSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGN 261 (486)
Q Consensus 183 ~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (486)
+.++..++. +...+++||.|+....++.........+++.+
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~-------------------------------------- 272 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWR-------------------------------------- 272 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHH--------------------------------------
Confidence 888876665 45567778876521111111112222222221
Q ss_pred CcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhh
Q 011416 262 KTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLA 341 (486)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 341 (486)
.++++.+.+....+ .+.++...-...++..+...+. .++.+++..+.........+.
T Consensus 273 ----------t~k~~~~~~~~~~f---Lia~~l~~dg~~ti~~~~~i~a----------~~~lg~s~~~l~~~~l~~~i~ 329 (477)
T PF11700_consen 273 ----------TFKEIRKLRQLFLF---LIAYFLYSDGVNTIISFAGIYA----------TEVLGMSTTQLIVFGLVVQIV 329 (477)
T ss_pred ----------HHHHHHhChHHHHH---HHHHHHHHHHHHHHHHHHHHHH----------HHhcCcCHHHHHHHHHHHHHH
Confidence 33444333333333 3333332223333333333222 134589999999999999999
Q ss_pred HHHHHHHHHHHHHHhchh--HHHHHHHHHHHHHHHHHhh--------hchhHHHHHHHHHHHHhhhhhhhhHhhhccccc
Q 011416 342 EIPGLLLAAILVDTAGRK--LSITIMFTLSCLFLLPLVT--------YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIY 411 (486)
Q Consensus 342 ~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (486)
+++|.++.|++.||+|.| +.+.++..+..+..+...+ ..+.+.+++..++.|++.++.++..-++.+|+.
T Consensus 330 a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~Li 409 (477)
T PF11700_consen 330 AIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLI 409 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhC
Confidence 999999999999999988 7777666665443333332 566778888889999999999999999999999
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHhccc
Q 011416 412 PTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 412 ~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
|+++.+..+|++...+...+.+||.+.|.+.+.+| .+..+....++.+++.++.+...
T Consensus 410 P~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 410 PPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999998 55666666666666666665443
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.7e-24 Score=180.35 Aligned_cols=384 Identities=12% Similarity=0.013 Sum_probs=251.0
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHH
Q 011416 22 YQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADN-YGRRMGFLGEALVT 100 (486)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~~~~~~~~~ 100 (486)
.|...+..+|+..|-.++.....+....+..++.+++.++..++.+.|++-..+...++|++.|| +|.|..-++-++..
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 34556666666667777778888888888999999999999999999999999999999999996 68888777777777
Q ss_pred HHhhhhhh---cCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 011416 101 AGAGLLSS---FSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD 176 (486)
Q Consensus 101 ~~~~~~~~---~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~ 176 (486)
.+|.++++ ..+.+|++.++||+.|+|.-.. .+-..+..-|+..||.+.++|+..+...+|..+-..+.+++.+..+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 77776664 4578999999999999998777 5556899999999999999999999999998877666666654322
Q ss_pred c------HHHH---HHhHHHHHHHHHHhhccCCCchhhhhcCChHH-HHHHHHHHHHhcCCCCCCchhhhccccCCCCCC
Q 011416 177 W------RWLL---GLSSIPSFILLAFLGFQPESPRYLCLKGRTAE-AHRALEKIAQVNKTKLPNGKLVARRSTLPTGER 246 (486)
Q Consensus 177 w------~~~f---~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (486)
- +... ...+......-+.. ....+-.|+ +++.++ .++...-
T Consensus 201 ~~~~~~ghT~LG~~l~~~~~tc~~slic---------al~lg~~D~rAerilh---~e~g~~G----------------- 251 (459)
T KOG4686|consen 201 RMFPGVGHTLLGLWLCFEVKTCKQSLIC---------ALSLGLSDDRAERILH---LEEGFLG----------------- 251 (459)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHH---------HHHhhhhhhHHHHHHh---hhcCccc-----------------
Confidence 1 0000 00111111100000 000011111 111111 1000000
Q ss_pred CCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCC
Q 011416 247 APPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHP 326 (486)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (486)
+++ .+.+. +...+.++++.....+.....+.+...-|.+. .+++|.
T Consensus 252 ---------------e~p-------kLtdv--~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF----------~~rfGl 297 (459)
T KOG4686|consen 252 ---------------EEP-------KLTDV--NTFYPPFWVLVIICVLYYVAWFPFITLGPMFF----------QKRFGL 297 (459)
T ss_pred ---------------CCc-------ccccc--cccCccHHHHHHHHHHHHHHHHHHhhhhHHHH----------HHhhCC
Confidence 000 00000 11112333333333333333333333333333 356789
Q ss_pred CCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHH-HHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhh
Q 011416 327 QDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLF-LLPLVTYQSNILTTGLLFGARMCVMGAFTVSLI 405 (486)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (486)
|+..++...+.......+.+++.|.++||+|++...+.+..+..+. -..+.+ +.+..+..+.+.|......-...|.
T Consensus 298 S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP 375 (459)
T KOG4686|consen 298 SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWP 375 (459)
T ss_pred ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhh
Confidence 9999999988888899999999999999999988776655544432 222222 2233345556667766666666888
Q ss_pred hccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccc----hHHHHHHHHHHHHHHHHhcccc
Q 011416 406 YAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQM----TAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 406 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
.++.+.|+++.|+++|..+.+.++|-.+.|++.|.+.|..|.+ ..|+..+.+.+....+.+.+.+
T Consensus 376 ~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 376 CVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred hhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheec
Confidence 8899999999999999999999999999999999999987732 2233444444544444554443
No 106
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.91 E-value=2e-21 Score=183.95 Aligned_cols=382 Identities=14% Similarity=0.015 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHHHHHhh
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTV-KSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY-GRRMGFLGEALVTAGAG 104 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~ 104 (486)
+..++...+...+..+.+...+|.+ .+++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++.+++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 3334444455555555555555554 567899999999999999999999999999999999 99999999999999998
Q ss_pred hhhhcCC-CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Q 011416 105 LLSSFSP-NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPS--NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWL 180 (486)
Q Consensus 105 ~~~~~a~-~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~ 180 (486)
++++..+ +...+.+...+.++|.|.. +...+++.|.+|++ +|..++++.+.+.++|..++|.+.+++.+..||++.
T Consensus 91 lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~ 170 (493)
T PRK15462 91 VVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMG 170 (493)
T ss_pred HHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHH
Confidence 7776543 2233444445555666766 66678899999875 699999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhhccCCCchhh-hhcCChHHHHHHHHH--------------HHHhcCCCCCCchhhhccccCCCCC
Q 011416 181 LGLSSIPSFILLAFLGFQPESPRYL-CLKGRTAEAHRALEK--------------IAQVNKTKLPNGKLVARRSTLPTGE 245 (486)
Q Consensus 181 f~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (486)
|.+.++..++.++.+....+..... ..++++.+.++.... .....-.+........-....
T Consensus 171 F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 246 (493)
T PRK15462 171 FGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATII---- 246 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 9987664444333332221110000 000000000000000 000000000000000000000
Q ss_pred CCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHH---HHHHH----HHHHHHHHhhhccccccCCC
Q 011416 246 RAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLF---GNSFA----YYAVVLLISELSSLDTRCRS 318 (486)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~ 318 (486)
....... ...+. .++..++++........ ..... ...+..+.....+
T Consensus 247 -----~~~~~~~-------------~~~~~-~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd------- 300 (493)
T PRK15462 247 -----GLGVLAK-------------IYRKA-ENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVN------- 300 (493)
T ss_pred -----HHHHHHH-------------HHHhc-CCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcc-------
Confidence 0000000 00000 01111122222111111 11111 1122222221110
Q ss_pred CccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhch--hH-----HHHHHHHHHHHHHHHHhh----h-----chh
Q 011416 319 PLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR--KL-----SITIMFTLSCLFLLPLVT----Y-----QSN 382 (486)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~--~~-----~~~~~~~~~~~~~~~~~~----~-----~~~ 382 (486)
.+-.|+. ....+..++..+..++.+++.+++-.|..+ |. -..+++++++++++.+.. . .+.
T Consensus 301 --~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~ 377 (493)
T PRK15462 301 --RDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSL 377 (493)
T ss_pred --chhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCH
Confidence 0011222 335566677777777777777777666522 21 256777888887766643 1 244
Q ss_pred HHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHH-HHHHHHHHHHHHHH
Q 011416 383 ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMG-RIGGMVCPLVAVAL 441 (486)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~~~~~i~g~l 441 (486)
++++...++..++.-...|+..+.+++..|++.+|..+|+..... .+|..++..+.+..
T Consensus 378 ~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 378 PLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777788889999999999999999999999999999985533 45555555554433
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.90 E-value=3.9e-21 Score=186.14 Aligned_cols=347 Identities=10% Similarity=-0.031 Sum_probs=221.8
Q ss_pred HHHHhhHhhhhc-hhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhh----hhcc-hHHHHHHHHHHHHhhhhhh
Q 011416 35 VAEAMEIMILSF-VGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVAD----NYGR-RMGFLGEALVTAGAGLLSS 108 (486)
Q Consensus 35 ~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~-r~~~~~~~~~~~~~~~~~~ 108 (486)
+...+......+ +...+.+.+|++..++|.+..+..+..++..|+.|.++| |+|| |+.++.+....+++..++.
T Consensus 16 ~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf 95 (473)
T PRK10429 16 FGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLF 95 (473)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHH
Confidence 333333334433 345566778999999999999999999999999999999 6698 6667778888888766665
Q ss_pred cCCC------HHHHHHHHHHHHhccCcc-hhhhhhhcccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-------
Q 011416 109 FSPN------YITLITLRCLVGVGLGSG-HVFLSWFLEFV-PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP------- 173 (486)
Q Consensus 109 ~a~~------~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~------- 173 (486)
..++ +..+++..++.+++.... .+..++..|.. +++||.+..++...+.++|..+.+.+...+.+
T Consensus 96 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~ 175 (473)
T PRK10429 96 SAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDR 175 (473)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 4332 334555666677777766 56668888988 68999999998777777776666555443321
Q ss_pred CCCcHHHHHHhHHHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccch
Q 011416 174 RLDWRWLLGLSSIPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELV 252 (486)
Q Consensus 174 ~~~w~~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (486)
..+|+....+.+++.++..+. .+..+|.+.....+.+.+
T Consensus 176 ~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~---------------------------------------- 215 (473)
T PRK10429 176 GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEG---------------------------------------- 215 (473)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccc----------------------------------------
Confidence 235677666666665554333 334555431100000000
Q ss_pred hhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhH
Q 011416 253 HLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLY 332 (486)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (486)
++.+....++.+++++..+.++. ..+......+....+.+.+.+ ....+....+
T Consensus 216 ------------~~~~~~~~~~~~~~n~~~~~ll~---~~~~~~~~~~~~~~~~~y~~~-----------y~~~~~~~~~ 269 (473)
T PRK10429 216 ------------SHLTLKDIVALIYKNDQLSCLLG---MALAYNIASNIINGFAIYYFT-----------YVIGDADLFP 269 (473)
T ss_pred ------------cCCCHHHHHHHHhcCHHHHHHHH---HHHHHHHHHHHHhhheeeEEE-----------EECCCHHHHH
Confidence 00000113444445544333222 222222333333333332321 1122344455
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-----hchhHHHHHHHHHHHHhhhhhhhhHhhhc
Q 011416 333 IDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-----YQSNILTTGLLFGARMCVMGAFTVSLIYA 407 (486)
Q Consensus 333 ~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (486)
.......++.+++.++.+++.||+|+|+.+.++..+.+++.+.+.. ..+.+...+..++.+++.+...+..+++.
T Consensus 270 ~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ 349 (473)
T PRK10429 270 YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMV 349 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666667888999999999999999999988777765554444322 23344555556667788888888888888
Q ss_pred ccccc-------ccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011416 408 AEIYP-------TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 408 ~~~~~-------~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
+|..+ ++..|..+|....+..++..+++.+.|.+.+..|+
T Consensus 350 ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 350 ADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88854 44457789999999999999999999999988775
No 108
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.89 E-value=5.1e-21 Score=171.18 Aligned_cols=395 Identities=15% Similarity=0.093 Sum_probs=286.0
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHH
Q 011416 18 GFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEA 97 (486)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~ 97 (486)
+..++||.+++..++..+.+.+.+-.+++.......-+| +....-|+.-+|.+.+....+++-|+.||+|-|....++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 355789999999999999999999999998888888889 8888899999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcCC------CHH--HHHHHHHHHHhccCcchhh-hhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011416 98 LVTAGAGLLSSFSP------NYI--TLITLRCLVGVGLGSGHVF-LSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGA 168 (486)
Q Consensus 98 ~~~~~~~~~~~~a~------~~~--~l~~~r~l~G~~~~~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~ 168 (486)
.+.++|..+-..+. .++ ....+..+.+.+.-..... .....-|++++||..+..+-..+..+|.+++.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 99999998877663 345 6667888888877766444 34556899999999999999999999999999998
Q ss_pred HHHhcCC------CcHH--HHHHhHHHHHHHHH-HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccc
Q 011416 169 WIIMPRL------DWRW--LLGLSSIPSFILLA-FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRS 239 (486)
Q Consensus 169 ~~l~~~~------~w~~--~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (486)
..+..+- .|.. .|+...+++.+.++ ..+..++.|+......+..+.
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~------------------------- 251 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ------------------------- 251 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh-------------------------
Confidence 8876543 4655 34444444444333 233344444321110000000
Q ss_pred cCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 011416 240 TLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSP 319 (486)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (486)
+.....+.+..+++ +.+.+..+.+......+++....+....
T Consensus 252 --------------------------~~~f~~si~~~~~n---~~F~il~~~ygi~~g~F~~l~~~l~~~l--------- 293 (480)
T KOG2563|consen 252 --------------------------DASFPKSIKSCFKN---RQFIILAICYGIGLGLFNSLSTLLNLAL--------- 293 (480)
T ss_pred --------------------------cCcHHHHHHHHHcC---ccHHHHHHHHhhhHHHHHHHHHHhhhcc---------
Confidence 00011144444444 4466666777777777777776666322
Q ss_pred ccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhch-hHHHHHHHHHHHHHHHHH-hh---hchhHHHHHHHHHHHH
Q 011416 320 LMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR-KLSITIMFTLSCLFLLPL-VT---YQSNILTTGLLFGARM 394 (486)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 394 (486)
...|++...+|.......++++++..+.|.+.||.+. |....+......++...+ .. ....+.+.....+.|+
T Consensus 294 --~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 294 --CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred --ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH
Confidence 2346777889999999999999999999999999875 444444444444442222 21 3344566667778888
Q ss_pred hhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc----cchHHHHHHHHHHHHHHHHhcccc
Q 011416 395 CVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH----QMTAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
+..+..|+..-+..|..-|..-++..|+.+..+++-+++-.++.+...+..+ +...-+.....+++..++..++++
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 8899999999999998766777888999999999999999999999888777 555556666666777777777665
Q ss_pred cccCCCcc
Q 011416 471 ETKGQELS 478 (486)
Q Consensus 471 ~~~~~~~~ 478 (486)
+.++++.+
T Consensus 452 ~y~R~~~e 459 (480)
T KOG2563|consen 452 DYRRLRAE 459 (480)
T ss_pred hHHhHhhh
Confidence 54444433
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.89 E-value=9.7e-21 Score=181.47 Aligned_cols=333 Identities=19% Similarity=0.135 Sum_probs=244.7
Q ss_pred chhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhh----hhcchHH-HHHHHHHHHHhhhhhhcC-C-------C
Q 011416 46 FVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVAD----NYGRRMG-FLGEALVTAGAGLLSSFS-P-------N 112 (486)
Q Consensus 46 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~r~~-~~~~~~~~~~~~~~~~~a-~-------~ 112 (486)
...+.+.+.+|+++...|.+..+..+..++..|+.|.++| |+||||. ++++....+++..++... + .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4456677888999999999999999999999999999999 8997654 556888888888877766 4 2
Q ss_pred HHHHHHHHHHHHhccCcc-hhhhhhhccccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CcHHHHHH
Q 011416 113 YITLITLRCLVGVGLGSG-HVFLSWFLEFVP-PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-------DWRWLLGL 183 (486)
Q Consensus 113 ~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-------~w~~~f~~ 183 (486)
...+.+..++..++.... .+..++..|..+ +++|.+..+.-..+..+|.++...+...+.+.. +|++...+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 233566677778888777 566688899997 578999999999999999876666666554322 69998888
Q ss_pred hHHHHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCC
Q 011416 184 SSIPSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNK 262 (486)
Q Consensus 184 ~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (486)
.+++.++..+. .+..+|+++. .++
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~------~~~------------------------------------------------- 207 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVE------VTE------------------------------------------------- 207 (428)
T ss_pred HHHHHHHHhhhhhheeeecccc------ccc-------------------------------------------------
Confidence 88887776444 5555661110 000
Q ss_pred cccCCCchhhhHhhhchhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhh
Q 011416 263 TTEGKSGLSLFLMLFSSKLARTTILLWLLL-FGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLA 341 (486)
Q Consensus 263 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 341 (486)
+.++.+....++.+++++..+......++. +..........++..+.. +.+ ...+.......+.
T Consensus 208 ~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl--------------~~~-~~~~~~~~~~~~~ 272 (428)
T PF13347_consen 208 QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVL--------------GNE-GLISIFMLIFFVA 272 (428)
T ss_pred cccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHh--------------cCc-hhhHHHHHHHHHH
Confidence 000001111456666666555544444433 233333333334444333 222 4556667788889
Q ss_pred HHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHhhhhhhhhHhhhcccccc-------
Q 011416 342 EIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ--SNILTTGLLFGARMCVMGAFTVSLIYAAEIYP------- 412 (486)
Q Consensus 342 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 412 (486)
.+++.++.++++||+|+|+.+..+..+.+++.+.+.+.. +.+...+...+.+++.+..+...+++.+|..+
T Consensus 273 ~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg 352 (428)
T PF13347_consen 273 SIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTG 352 (428)
T ss_pred HHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcC
Confidence 999999999999999999999999999999888877754 78888888899999999999999999999876
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011416 413 TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQM 448 (486)
Q Consensus 413 ~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~ 448 (486)
++..|..+|+.+....++..+++.+.+.+.+..|+.
T Consensus 353 ~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 353 RRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred CCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 345699999999999999999999999998887643
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.88 E-value=3.2e-20 Score=168.51 Aligned_cols=277 Identities=13% Similarity=0.065 Sum_probs=196.6
Q ss_pred cCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------
Q 011416 109 FSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR------------- 174 (486)
Q Consensus 109 ~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~------------- 174 (486)
...+|+.++++-++.|.|.+.. +...+++++..++|++.+.+++.+.++++|..++|.+++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4568999999999999999999 88999999999999999999999999999999999999987732
Q ss_pred ---CCcHHHHHHhHHHHHHHHHHhhcc--CCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCc
Q 011416 175 ---LDWRWLLGLSSIPSFILLAFLGFQ--PESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPP 249 (486)
Q Consensus 175 ---~~w~~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (486)
.+|+++|++.+++.++..+.+.+. ||.++ +++ ++..+
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~----~~~-~~~~~--------------------------------- 127 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE----ADV-ARVSS--------------------------------- 127 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc----ccc-ccccc---------------------------------
Confidence 379999997776655554443333 43211 000 00000
Q ss_pred cchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCc
Q 011416 250 ELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDA 329 (486)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (486)
++.. ..+..+++ +..++..+..++......+...|.+.+..+ .+..|.++.
T Consensus 128 ---------------~~~~---~~~~~~~~---~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~--------~~~~g~s~~ 178 (310)
T TIGR01272 128 ---------------GDTT---QKTSAFQF---THLVLGALGIFVYVGAEVSAGSFLVNFLSD--------PHALGLPED 178 (310)
T ss_pred ---------------cccc---chhhHHhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cccCCCCHH
Confidence 0000 00112222 223333333444444444555555554411 112478899
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccc
Q 011416 330 NLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAE 409 (486)
Q Consensus 330 ~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (486)
+.+........+.++|+++++++.||+++|+.+.++..+.+++.++....++.. ......+.+++.+..+|...+...+
T Consensus 179 ~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~ 257 (310)
T TIGR01272 179 QAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALN 257 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999988888777777665554433332 3345567889999999999999999
Q ss_pred cccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHH
Q 011416 410 IYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLV 455 (486)
Q Consensus 410 ~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~ 455 (486)
..|++ .+++.++. ..+.+|+.+.|.+.|.+.|..|...++++..
T Consensus 258 ~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 258 ALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred hhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 88754 56777775 6778999999999999999988777766433
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.88 E-value=9.3e-20 Score=175.91 Aligned_cols=330 Identities=11% Similarity=-0.069 Sum_probs=202.1
Q ss_pred hhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh----cchHHH-HHHHHHHHHhhhhh-hc----CCC--HH
Q 011416 47 VGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY----GRRMGF-LGEALVTAGAGLLS-SF----SPN--YI 114 (486)
Q Consensus 47 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~----G~r~~~-~~~~~~~~~~~~~~-~~----a~~--~~ 114 (486)
+.+.+.+.+|++..++|.+.+...+..++..|+.|.++||. |||+.. ..+.+...+...+. .. .++ ..
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 34567778899999999999999999999999999999986 776644 55555444444332 21 122 23
Q ss_pred HHHHHHHHHHhccCcc-hhhhhhhcccc-CCCchhHHHHHHHHHHH-----HHHHHHHHHHHHHhcCC--CcHHHHHHhH
Q 011416 115 TLITLRCLVGVGLGSG-HVFLSWFLEFV-PPSNRGMWMVIFSSFWT-----IGSVSEAIGAWIIMPRL--DWRWLLGLSS 185 (486)
Q Consensus 115 ~l~~~r~l~G~~~~~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~-----~G~~i~~~l~~~l~~~~--~w~~~f~~~~ 185 (486)
.+++..++.+++.+.. ++..++..+.. ++++|.+..++-..+.+ ++..++|.++....+.. +|.....+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~ 190 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLA 190 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 3444556677777766 55556666555 44678887766654433 44555565554332111 1211112223
Q ss_pred HHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcc
Q 011416 186 IPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTT 264 (486)
Q Consensus 186 ~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (486)
+++++.. +.....||+++. +.++.
T Consensus 191 v~~~~~~~~~~~~~~e~~~~---~~~~~---------------------------------------------------- 215 (448)
T PRK09848 191 IAGMVLYFICFKSTRENVVR---IVAQP---------------------------------------------------- 215 (448)
T ss_pred HHHHHHHHHHHcCcEeccCC---CccCC----------------------------------------------------
Confidence 3333322 223334443210 00000
Q ss_pred cCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHH
Q 011416 265 EGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIP 344 (486)
Q Consensus 265 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 344 (486)
.....++.+++++.........+ .....+.......+.+.+ +..+.++...++......++.++
T Consensus 216 ---~~~~~~~~l~~n~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~ 279 (448)
T PRK09848 216 ---SLKISLQTLKRNRPLFMLCIGAL---CVLISTFAVSASSLFYVR----------YVLNDTGLFTVLVLVQNLVGTVA 279 (448)
T ss_pred ---CHHHHHHHHhCCchHHHHHHHHH---HHHHHHHHHhhhheeeEe----------eecCChHHHHHHHHHHHHHHHHH
Confidence 00113555666555433332222 222333333333333321 22355554444444444566788
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHhhhhhhhhHhhhcccccccc-------c
Q 011416 345 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ--SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS-------V 415 (486)
Q Consensus 345 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 415 (486)
+.++.+++.||+++|+.+.++.++.+++.+.+.+.+ +.+......++.+++.+...+..++...|..+.+ .
T Consensus 280 ~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~ 359 (448)
T PRK09848 280 SAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRI 359 (448)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccc
Confidence 899999999999999999999888777776665532 3444555566778888888888888888887643 4
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011416 416 RSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 416 ~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
.|..+|+.+....+|..+++.+.|.+.+..|+
T Consensus 360 ~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 360 EGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 69999999999999999999999999887765
No 112
>PRK11462 putative transporter; Provisional
Probab=99.87 E-value=6.9e-19 Score=169.20 Aligned_cols=329 Identities=12% Similarity=-0.010 Sum_probs=210.2
Q ss_pred hhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhh----hcchH-HHHHHHHHHHHhhhhhhcCCC------HHH
Q 011416 47 VGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADN----YGRRM-GFLGEALVTAGAGLLSSFSPN------YIT 115 (486)
Q Consensus 47 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~G~r~-~~~~~~~~~~~~~~~~~~a~~------~~~ 115 (486)
+...+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +|||| .++++....+++.+++...++ ...
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4455677889999999999999999999999999999995 68864 555677788887776655543 334
Q ss_pred HHHHHHHHHhccCcc-hhhhhhhccccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCcHHHHHHhHH
Q 011416 116 LITLRCLVGVGLGSG-HVFLSWFLEFVP-PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-------LDWRWLLGLSSI 186 (486)
Q Consensus 116 l~~~r~l~G~~~~~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~-------~~w~~~f~~~~~ 186 (486)
+++.-++..++.... .+-.++..|..+ ++||++..++...+..+|..+++.+...+.+. .+|+....+.++
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 555666667777766 555577888876 78999999999999999988887776554432 357777777776
Q ss_pred HHHHHHHH-hhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCccc
Q 011416 187 PSFILLAF-LGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTE 265 (486)
Q Consensus 187 ~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (486)
+.++..+. ....+|.++. ++++..
T Consensus 192 i~~i~~~i~~~~~kE~~~~---~~~~~~---------------------------------------------------- 216 (460)
T PRK11462 192 VAFMMLAFCFFTTKERVEA---PPTTTS---------------------------------------------------- 216 (460)
T ss_pred HHHHHHHHHHhcceeccCC---CccCCC----------------------------------------------------
Confidence 66655433 3334443211 000000
Q ss_pred CCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHH
Q 011416 266 GKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPG 345 (486)
Q Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 345 (486)
....++..++++.++.+....+..........+...+...+. .+ ++...+.......+..+++
T Consensus 217 ---~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-------------~g-~~~~~~~~l~~~~i~~iig 279 (460)
T PRK11462 217 ---MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-------------LG-TPEVFVAFLTTYCVGNLIG 279 (460)
T ss_pred ---HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-------------cC-ChHHHHHHHHHHHHHHHHH
Confidence 001444555565555444333333332222222222222221 12 2223345566777888999
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hc-hhHHHHHHHHHHHHhhhhhhhhHhhhcccccc-------ccch
Q 011416 346 LLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT-YQ-SNILTTGLLFGARMCVMGAFTVSLIYAAEIYP-------TSVR 416 (486)
Q Consensus 346 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 416 (486)
.++++++.||+++|+....+..+..+..+++.+ .. +.+...+..++.+++.+...+..+++..|..+ .+..
T Consensus 280 ~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~ 359 (460)
T PRK11462 280 SALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLT 359 (460)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCch
Confidence 999999999999998876554443332333322 22 22233444455566666666666777776654 3444
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011416 417 STGAGAANAMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 417 ~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
|..++.......+|..+++.+.|.+.+..|+
T Consensus 360 g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 360 GISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6666777788999999999999999987665
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=3.5e-19 Score=158.79 Aligned_cols=350 Identities=15% Similarity=0.095 Sum_probs=243.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHH-HHHHHHHHHHhhhhhhcCCC--HHH-HHHHHHHHHhccCcc-hhhh
Q 011416 60 TEESLITTSVFAGLVVGAYAWGLVADNYGRRMG-FLGEALVTAGAGLLSSFSPN--YIT-LITLRCLVGVGLGSG-HVFL 134 (486)
Q Consensus 60 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~-~~~~~~~~~~~~~~~~~a~~--~~~-l~~~r~l~G~~~~~~-~~~~ 134 (486)
+..|...++..+..++.+|+.|.++|+.|+||. +-....+..+++.+..++++ ++. .++...+..++.... ....
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 445888899999999999999999999997654 55566666667777777765 444 445566777777766 4455
Q ss_pred hhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH---Hh---------------cCCCcHHHHHHhHHHHHHHHH-Hh
Q 011416 135 SWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWI---IM---------------PRLDWRWLLGLSSIPSFILLA-FL 195 (486)
Q Consensus 135 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~---l~---------------~~~~w~~~f~~~~~~~~~~~~-~~ 195 (486)
+++.+..++++-++..++-.....+|+.+.-+..-. .. +...-|..+.+.++..++..+ .+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 899999999999998888888888887776554311 11 233467788888777777644 45
Q ss_pred hccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHh
Q 011416 196 GFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLM 275 (486)
Q Consensus 196 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (486)
+..++.++.. ...+...++..+++.+ .+++
T Consensus 218 ~~v~~~~~~~--~~~~~~l~~g~k~L~~------------------------------------------------t~k~ 247 (438)
T COG2270 218 LNVHDAEKIS--SPPPTALRNGFKELKS------------------------------------------------TFKE 247 (438)
T ss_pred hccccccccc--ccchHHHHHHHHHHHH------------------------------------------------HHHH
Confidence 5555544310 0111112222222221 4555
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH
Q 011416 276 LFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT 355 (486)
Q Consensus 276 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr 355 (486)
+++++....++...+.+.- ...+...+...+. ...+|.+..+..+.....++..++|+++.|++.||
T Consensus 248 i~~~~~i~~FLiA~~~~~D---Gv~til~~~~~fg----------~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r 314 (438)
T COG2270 248 IRGRKNLVLFLIARFFYID---GVNTILAMGGVFG----------AADLGLSSTELLLIGIALSVVAALGAIIAGFLDER 314 (438)
T ss_pred HhcccchHHHHHHHHHHHh---hHHHHHHHHHHHH----------HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555544444444333321 1112222222222 12458999999999999999999999999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHH
Q 011416 356 AGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 435 (486)
Q Consensus 356 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 435 (486)
+|.|+++.++.++..+..+...+.......+++.++.|.+.++.++..-++..+.+|+++.++.+|+++..+...+.++|
T Consensus 315 fg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp 394 (438)
T COG2270 315 FGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGP 394 (438)
T ss_pred hCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHH
Confidence 99999999998888887777776666667778888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 436 LVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 436 ~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
++.+.+.+.+|....-+....+.+......+...|..
T Consensus 395 ~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 395 FLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9999999988865444433333333333333333333
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.85 E-value=5.4e-18 Score=156.35 Aligned_cols=333 Identities=17% Similarity=0.094 Sum_probs=240.0
Q ss_pred hchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhh----hhcc-hHHHHHHHHHHHHhhhhhhcCCC------HHHH
Q 011416 48 GPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVAD----NYGR-RMGFLGEALVTAGAGLLSSFSPN------YITL 116 (486)
Q Consensus 48 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~-r~~~~~~~~~~~~~~~~~~~a~~------~~~l 116 (486)
+-.+.+.+|++...+|.+..+.-+--++.-|+.|.+.| |+|| |+.++++.+..++.+.++..+++ ....
T Consensus 36 l~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya 115 (467)
T COG2211 36 LFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYA 115 (467)
T ss_pred HHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHH
Confidence 34567789999999999999999999999999999999 4777 55677788999999888888774 4456
Q ss_pred HHHHHHHHhccCcc-hhhhhhhcccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCcHHHHHHhHHH
Q 011416 117 ITLRCLVGVGLGSG-HVFLSWFLEFV-PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP-------RLDWRWLLGLSSIP 187 (486)
Q Consensus 117 ~~~r~l~G~~~~~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~-------~~~w~~~f~~~~~~ 187 (486)
++.-.+.+++.... .+-.++..|.. +++||.+..++-+.+.++|..+...+...+.. ..||+..-.+.+++
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi 195 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVI 195 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 67778888888887 55557777776 46899999999999999997777666655542 34788888787777
Q ss_pred HHHHHHHh-hccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccC
Q 011416 188 SFILLAFL-GFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEG 266 (486)
Q Consensus 188 ~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (486)
+.+..+.. +-.+|.+... +..+++. .
T Consensus 196 ~~i~~l~~~~~v~ER~~~~--~~~~~~~---------------------------------------------------~ 222 (467)
T COG2211 196 GVILLLFCFFNVKERVVET--QPTKTGV---------------------------------------------------K 222 (467)
T ss_pred HHHHHHHHHHHhhcccCcc--ccCcccc---------------------------------------------------c
Confidence 77765543 3345543200 0000000 0
Q ss_pred CCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHH-HHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHH
Q 011416 267 KSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAV-VLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPG 345 (486)
Q Consensus 267 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 345 (486)
......+..+++++.++..++..++.++..-...+. .+|.. ...+.++............+.+++
T Consensus 223 ~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~--------------y~lg~~~l~~~~~~~~~~~~~l~~ 288 (467)
T COG2211 223 LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVT--------------YVLGDPELFAYLLLLASGAGLLIG 288 (467)
T ss_pred ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEE--------------EEcCChHHHHHHHHHHHHHHHHHH
Confidence 000013344556655554444333333222222222 22222 223666777777777878888888
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHhhhhhhhhHhhhccccc-------cccch
Q 011416 346 LLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ--SNILTTGLLFGARMCVMGAFTVSLIYAAEIY-------PTSVR 416 (486)
Q Consensus 346 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 416 (486)
.++..++++|+|+|++..++.++.+++.+++.+.+ +.+..++..++.+++.+...+..+++++|.. ..+..
T Consensus 289 ~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~e 368 (467)
T COG2211 289 LILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRRE 368 (467)
T ss_pred HHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCch
Confidence 99999999999999999999999999888887744 4556666668888999999999999999875 34556
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011416 417 STGAGAANAMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 417 ~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
|..+|....+..+|.+++..+.|++.+..|+
T Consensus 369 Gi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 369 GIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8899999999999999999999999998774
No 115
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.84 E-value=7e-20 Score=169.04 Aligned_cols=391 Identities=15% Similarity=0.087 Sum_probs=251.7
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhh--cCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-hHH
Q 011416 16 HVGFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSE--WNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGR-RMG 92 (486)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~ 92 (486)
....++.+|+.+.+..+..++.......+.+..-++.++ .+.+.+..|++.++..++.+++++..|....|.+. |+.
T Consensus 25 ~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P 104 (488)
T KOG2325|consen 25 PLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP 104 (488)
T ss_pred cccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC
Confidence 334567889999999999999999888888777777776 67778889999999999999999999999999987 889
Q ss_pred HHHHHHHHHHhhhhh-hcC---C-CHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011416 93 FLGEALVTAGAGLLS-SFS---P-NYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIG 167 (486)
Q Consensus 93 ~~~~~~~~~~~~~~~-~~a---~-~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l 167 (486)
++.+.++..++.++. +++ + +.+.++++|++.|+|.|......+|+++....++|.++++....+..+|.++||.+
T Consensus 105 li~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 999999999999988 332 3 67889999999999999888899999999999999999999999999999999998
Q ss_pred HHHHhcC--CC-----------cHHHHHHhHHHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCch
Q 011416 168 AWIIMPR--LD-----------WRWLLGLSSIPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGK 233 (486)
Q Consensus 168 ~~~l~~~--~~-----------w~~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (486)
+..+..- .| +..+-|+.+++.++.+ ++.++++|.++....++..++ + +.+.
T Consensus 185 q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~-~-------~~~~------- 249 (488)
T KOG2325|consen 185 QLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV-E-------EEKS------- 249 (488)
T ss_pred HHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc-h-------hhcc-------
Confidence 8776421 11 3456677778777754 445666776542211111000 0 0000
Q ss_pred hhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 011416 234 LVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFS-SKLARTTILLWLLLFGNSFAYYAVVLLISELSSL 312 (486)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (486)
...+... +..+...+++++..+...+.+.......+.+.
T Consensus 250 --------------------------------------~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~-- 289 (488)
T KOG2325|consen 250 --------------------------------------DIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALT-- 289 (488)
T ss_pred --------------------------------------chhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHH--
Confidence 0000000 12223344444555555454444333222211
Q ss_pred cccCCCCccccCCCCCchhHHH----HHHHHhhHHHHHHHHHHHH-HHhchhHHHHHHHHHHHHHHHHHhh----hc---
Q 011416 313 DTRCRSPLMFSHHPQDANLYID----EFITSLAEIPGLLLAAILV-DTAGRKLSITIMFTLSCLFLLPLVT----YQ--- 380 (486)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~g~l~-dr~g~~~~~~~~~~~~~~~~~~~~~----~~--- 380 (486)
+..++.+.+++... .+..++..+.-.+...... .++.+|..+..+.+....+..+... ..
T Consensus 290 --------m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv 361 (488)
T KOG2325|consen 290 --------MVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPV 361 (488)
T ss_pred --------HHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeecccccccc
Confidence 11123333333222 2222222222222222222 2323344444443333333332221 00
Q ss_pred ---h---------------------hHH-HHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHH
Q 011416 381 ---S---------------------NIL-TTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 435 (486)
Q Consensus 381 ---~---------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 435 (486)
+ .+. .....++.|.+.........+.-+|...+++++++.|+.......+..++|
T Consensus 362 ~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~ 441 (488)
T KOG2325|consen 362 QPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGP 441 (488)
T ss_pred ccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhH
Confidence 0 000 111223334444444556788889999999999999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 436 LVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 436 ~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.+........|....+.+.++..++...+.....
T Consensus 442 ~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~ 475 (488)
T KOG2325|consen 442 IFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFL 475 (488)
T ss_pred HHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988777776666666555554443
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.81 E-value=3.7e-17 Score=149.41 Aligned_cols=413 Identities=15% Similarity=0.027 Sum_probs=254.3
Q ss_pred HHHHHHHHHHHHHhhHhhhh-chhchhhhhcC----CCcchhHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHH
Q 011416 26 VLAYAGLGWVAEAMEIMILS-FVGPTVKSEWN----LSSTEESLITTSVFAGLVVGAYAWGLVADNY-GRRMGFLGEALV 99 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~~~~~~~~ 99 (486)
.+..++..-+-..++.+-+. .+.-++..+++ .|+++..-+.++|..-.-+..+++|+++||+ |+|+++.+|.++
T Consensus 22 ~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail 101 (498)
T COG3104 22 GLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAIL 101 (498)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Confidence 34444455555544444333 33334445555 9999998888888888888899999999996 999999999999
Q ss_pred HHHhhhhhhcCC--CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 011416 100 TAGAGLLSSFSP--NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPS--NRGMWMVIFSSFWTIGSVSEAIGAWIIMPR 174 (486)
Q Consensus 100 ~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~ 174 (486)
..+|.++.+.+. +...+.++-.+.++|.|.. +...+++.|.+|++ +|-..++++..+.++|+.++|.+.+++.++
T Consensus 102 ~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~ 181 (498)
T COG3104 102 MAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN 181 (498)
T ss_pred HHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh
Confidence 999999999984 7889999999999999999 88889999999764 477789999999999999999999999999
Q ss_pred CCcHHHHHHhHHHHHHHHHHhhccCCCchhhhh-----cCChHHHHHHHHH----HHHhc-CCCCCCchhhhccccCCCC
Q 011416 175 LDWRWLLGLSSIPSFILLAFLGFQPESPRYLCL-----KGRTAEAHRALEK----IAQVN-KTKLPNGKLVARRSTLPTG 244 (486)
Q Consensus 175 ~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~ 244 (486)
+||...|...++-..+.++.+...+..-..... ..+..+....... .-... ......+....
T Consensus 182 ~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------- 253 (498)
T COG3104 182 YGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSG-------- 253 (498)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 999999998877666655554443321100000 0011111100000 00000 00000000000
Q ss_pred CCCCccchhhcccCCCCCcccCCCchhhhHhhhc-h---hhHHHHHHHHHHHHHHHHHHH--------HHHHHHhhhccc
Q 011416 245 ERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFS-S---KLARTTILLWLLLFGNSFAYY--------AVVLLISELSSL 312 (486)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~---~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 312 (486)
........ .......+.++ + ..+++.+..+.++. ....+| ....+.....+.
T Consensus 254 -----~~~~~~i~----------~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl-~~~iFW~~~~Q~~ssl~~~a~~~v~~ 317 (498)
T COG3104 254 -----VLLVISIL----------IAIIYFAEAFRSPKVFDERRRLLAAIPLFL-FAVIFWALYEQMGSSLNLYADRNVNR 317 (498)
T ss_pred -----HHHHHHHH----------HHHHHHHHHhccCccHHHHHHHHHHHHHHH-HHHHHHHHHHhccchHHHHHHHhhcc
Confidence 00000000 00000000000 0 11122222222111 111111 112222221100
Q ss_pred cccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchh-------HHHHHHHHHHHHHHHHHhhh------
Q 011416 313 DTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK-------LSITIMFTLSCLFLLPLVTY------ 379 (486)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~-------~~~~~~~~~~~~~~~~~~~~------ 379 (486)
+..| -+....+..++..+.-++.+++..++..|.+++ .-...+..+++.+++++...
T Consensus 318 ---------~~~g-~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~ 387 (498)
T COG3104 318 ---------QIFG-FEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGG 387 (498)
T ss_pred ---------cccc-eecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 0122 233456677777788888888888888875433 23456666666666655442
Q ss_pred ----chhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHH------HHHhhccch
Q 011416 380 ----QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVA------LVANCHQMT 449 (486)
Q Consensus 380 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~------l~~~~g~~~ 449 (486)
.+.++.+...++.+++.-...|+..+++.+..|+...+..+++.......++.++..+.+. ..+......
T Consensus 388 ~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~ 467 (498)
T COG3104 388 PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGR 467 (498)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhh
Confidence 2456777888889999999999999999999999999999998888877777777776662 344445566
Q ss_pred HHHHHHHHHHHHHHHHhcccccc
Q 011416 450 AVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
.|..++...++..+......|+.
T Consensus 468 ~F~~~g~v~i~~~~~~~~~~~~~ 490 (498)
T COG3104 468 VFGTIGVVAIVIGILLLLLSPKL 490 (498)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHH
Confidence 67777777766666655554433
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.80 E-value=5.8e-16 Score=138.94 Aligned_cols=329 Identities=15% Similarity=0.096 Sum_probs=230.5
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhc-----chHHHHH-HHHHHHHhhhhhhcC-----C-------
Q 011416 50 TVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYG-----RRMGFLG-EALVTAGAGLLSSFS-----P------- 111 (486)
Q Consensus 50 ~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G-----~r~~~~~-~~~~~~~~~~~~~~a-----~------- 111 (486)
.+..|++++..-.+.+.+..++... ..+.+|+.+|+.+ ||..+++ |.++...+..+..++ .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 3567899999999999999988776 5899999999999 8766555 566655555544432 2
Q ss_pred CH--H--HHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhH-
Q 011416 112 NY--I--TLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSS- 185 (486)
Q Consensus 112 ~~--~--~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~- 185 (486)
+. + ...+...+.|+|.+.. .+..++++|..|+++|+++.++.....-+|.+++..+.+.+.+.++-.-...+..
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 22 2 2344566788888887 7777999999999999999999999999999999999998888776433333222
Q ss_pred --HHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCc
Q 011416 186 --IPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKT 263 (486)
Q Consensus 186 --~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (486)
++.++..++..+-.|++.....+ .++
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~~~~~~----------------------------------------------------~~~ 191 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRRSRRAA----------------------------------------------------AAE 191 (403)
T ss_pred HHHHHHHHHHHHHHhcccCCccccc----------------------------------------------------CCC
Confidence 22222222222222322100000 000
Q ss_pred ccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHH
Q 011416 264 TEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEI 343 (486)
Q Consensus 264 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 343 (486)
+++.+....+++++.++..+++....+.. .+.++..-..+.. +--+.+|++..+...+....+.+.+
T Consensus 192 ~~~~~f~~a~~~~~~~~~a~~f~~fl~l~---t~a~~~QD~iLEP----------ygg~Vfgmsv~eTT~Lta~~~~G~L 258 (403)
T PF03209_consen 192 RPRPPFREAWRQVWASPQARRFFVFLFLG---TLAFFMQDVILEP----------YGGEVFGMSVGETTRLTAFWGGGTL 258 (403)
T ss_pred CCCccHHHHHHHHHhCCChhHHHHHHHHH---HHHHHhhHHHcCC----------chhHHcCCCHHHHHHHHHHHHHHHH
Confidence 11111122556666555555544433332 2222222222222 2235678999999999999999999
Q ss_pred HHHHHHHHHHH-HhchhHHHHHHHHHHHHHHHHHhh---hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhH
Q 011416 344 PGLLLAAILVD-TAGRKLSITIMFTLSCLFLLPLVT---YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 419 (486)
Q Consensus 344 ~~~~~~g~l~d-r~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (486)
+|....|++.. |.++++...++....++++..+.. ..+.+.+....+++|++.+.......+...+..++++.|..
T Consensus 259 ~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~ 338 (403)
T PF03209_consen 259 LGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLF 338 (403)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHH
Confidence 99999998877 577777777787777777666554 55677888888999999999988899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 420 AGAANAMGRIGGMVCPLVAVALVAN 444 (486)
Q Consensus 420 ~g~~~~~~~~g~~~~~~i~g~l~~~ 444 (486)
+|.-...+.+...++.++.|.+.|.
T Consensus 339 mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 339 MGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988875
No 118
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.73 E-value=6.9e-15 Score=138.39 Aligned_cols=361 Identities=16% Similarity=0.113 Sum_probs=242.6
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcc-hhHHHHHH----HHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSST-EESLITTS----VFAGLVVGAYAWGLVADNYGRRMGFLGEALVT 100 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~g~~~s~----~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~ 100 (486)
......+-.+..++.........+.....++.+.. ..+..... ..+...+.++..|.++||+|||..+....+..
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~ 102 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGT 102 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHH
Confidence 33444444444444444444555555555544332 22333333 36788899999999999999999999999998
Q ss_pred HHhhhhhhcCCCHHHHHHHHHHHHhccCcc---hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 101 AGAGLLSSFSPNYITLITLRCLVGVGLGSG---HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 101 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~---~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
.+..++..+.. +|.++ +.|+..+.. ....++++|....++|....|+.......+..++|.+++.+.+..|.
T Consensus 103 ~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~ 177 (463)
T KOG2816|consen 103 ILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI 177 (463)
T ss_pred HHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc
Confidence 88888777765 33333 666655443 45668999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHH-HHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcc
Q 011416 178 RWLLGLSSIPSFILL-AFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLS 256 (486)
Q Consensus 178 ~~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (486)
-.+|.+..+..++.. ...+++||+-... ++.++ . .++....+..
T Consensus 178 a~~f~ia~~~~~~~~~y~~~~l~Esl~~~---~~~~~---~---~~~~~~~~~~-------------------------- 222 (463)
T KOG2816|consen 178 ALVFLIAAASGILSLLYMLLFLPESLQEK---ERSDA---T---LRELTPGSLD-------------------------- 222 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhhccccccCcc---ccccc---c---ccccCCCccc--------------------------
Confidence 999999888887764 4567788874311 11100 0 0000000000
Q ss_pred cCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHH
Q 011416 257 SNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEF 336 (486)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (486)
.......++...+.+..+..+.++...+....... .........+....++++..+.+.+.+
T Consensus 223 ---------~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~---------~~~~~~~~~yl~~~f~w~~~~~s~~~~ 284 (463)
T KOG2816|consen 223 ---------SSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEA---------GGASDVLLLYLKAKFGWNKKEFSDLLS 284 (463)
T ss_pred ---------chhhhhhhhhhcccCCCccchHHHHHHHHHHHHHh---------cCceeEEEEEEeeecCcCHHHHHHHHH
Confidence 00000011111112222222222222221111111 111000011345667899999998888
Q ss_pred HHHhhHHHHHHHHH-HHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccc
Q 011416 337 ITSLAEIPGLLLAA-ILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV 415 (486)
Q Consensus 337 ~~~i~~~~~~~~~g-~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (486)
..++.+.++..+.. .+...++.|+.+..|+....+......+.++.|..+....+. .......|...+..+...++++
T Consensus 285 ~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~~e 363 (463)
T KOG2816|consen 285 LVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVV-ALAGIVFPAIRAFASILVSPEE 363 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHH-HhhcchhHHHHhHHHhhccccc
Confidence 88999999888776 777778999999999999999999999988887776665554 4457778999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011416 416 RSTGAGAANAMGRIGGMVCPLVAVALVANC 445 (486)
Q Consensus 416 ~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~ 445 (486)
+|.++++...+..+.+.++|.+.+.++..+
T Consensus 364 ~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 364 QGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred ccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 999999999999999999999999887543
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.73 E-value=2.2e-16 Score=153.98 Aligned_cols=183 Identities=14% Similarity=0.012 Sum_probs=137.3
Q ss_pred hHhhhhchhchhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhh---hhhcCCCHHH
Q 011416 40 EIMILSFVGPTVK-SEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGL---LSSFSPNYIT 115 (486)
Q Consensus 40 ~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~---~~~~a~~~~~ 115 (486)
.........|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.. ....+++...
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGL 344 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 3334444556654 66899888888888889999999999999999999999998887765443322 2223456788
Q ss_pred HHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHhHHHHHHHHH
Q 011416 116 LITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-DWRWLLGLSSIPSFILLA 193 (486)
Q Consensus 116 l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~ 193 (486)
+++++++.|++.+.. .....++.|.+|++.|++++|+......++..++|.+.+.+.+.. +|+.++++..+++++.++
T Consensus 345 ~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~ 424 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 888999998876655 455567789999999999999755555666778888888877654 578777777777777666
Q ss_pred HhhccCCCchhhhhc-----CChHHHHHHHHHHH
Q 011416 194 FLGFQPESPRYLCLK-----GRTAEAHRALEKIA 222 (486)
Q Consensus 194 ~~~~~~e~~~~~~~~-----~~~~~~~~~~~~~~ 222 (486)
..+++||+|++..++ ++.+|+++.+++++
T Consensus 425 ~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 425 TGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 667789999887654 67777777777664
No 120
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.72 E-value=5.4e-19 Score=170.42 Aligned_cols=376 Identities=16% Similarity=0.100 Sum_probs=3.0
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 109 (486)
+++..++...........+..++++|++++++.|++.+.+-++..+..++..++.+|..|-|++-.|.+++++|++++++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhc
Confidence 34444555666777778889999999999999999999999999999999999999988888999999999999988765
Q ss_pred CC--------------------------------------------------CHHHHHHHHHHHHhccCcc-hhhhhhhc
Q 011416 110 SP--------------------------------------------------NYITLITLRCLVGVGLGSG-HVFLSWFL 138 (486)
Q Consensus 110 a~--------------------------------------------------~~~~l~~~r~l~G~~~~~~-~~~~~~i~ 138 (486)
-+ -++.++++.++.|+|.... +...+|+-
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 10 0345788999999999988 88899999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC----------------------CcHHHHHHhHHHHHHHHHHhh
Q 011416 139 EFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL----------------------DWRWLLGLSSIPSFILLAFLG 196 (486)
Q Consensus 139 ~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~----------------------~w~~~f~~~~~~~~~~~~~~~ 196 (486)
|..++++-+..+|+..+...+|.++|.++++.+.+.+ .|..-|++.+++.++..+..+
T Consensus 168 Dnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~ 247 (539)
T PF03137_consen 168 DNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLF 247 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998765311 165666666777666666677
Q ss_pred ccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhh
Q 011416 197 FQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLML 276 (486)
Q Consensus 197 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 276 (486)
++|++-+... +..++.+. ++.+..+..+ ++.+.+. ........-+..+...+.+
T Consensus 248 ~FPk~lp~~~--~~~~~~~~--~~~~~~~~~~----------------~~~~~~~------~~~~~~~~~~df~~~l~~L 301 (539)
T PF03137_consen 248 FFPKKLPGTS--ERQEEKES--SERKEEDSDK----------------DSFKDPK------SKKSFGKSIKDFPKALKRL 301 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCccCCCcc--cccchhhh--hhcchhhhhh----------------hcccccc------cccchhhhhhhHHHHHHHH
Confidence 7776533210 00000000 0000000000 0000000 0000000111122233444
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHh-hHHHHHHHHHHHHHH
Q 011416 277 FSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSL-AEIPGLLLAAILVDT 355 (486)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~g~l~dr 355 (486)
++++. +....+..........++..+.|.+. ..+++.++..+.++.....+ +.++|.+++|++.+|
T Consensus 302 l~Np~---f~~~~la~~~~~~~~~G~~tF~pKyl----------E~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk 368 (539)
T PF03137_consen 302 LTNPV---FMCLILAGVFESFIVSGFATFLPKYL----------ESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKK 368 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcChH---HHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEE
Confidence 44432 33333334445555566666777655 34567888888877755554 567888999999999
Q ss_pred hc--hhHHHHHHHHHHHHHHHH---Hhh-------------hc-------------------------------------
Q 011416 356 AG--RKLSITIMFTLSCLFLLP---LVT-------------YQ------------------------------------- 380 (486)
Q Consensus 356 ~g--~~~~~~~~~~~~~~~~~~---~~~-------------~~------------------------------------- 380 (486)
++ .|..+....+...+..+. ..+ ..
T Consensus 369 ~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~ 448 (539)
T PF03137_consen 369 FKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCC 448 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccc
Confidence 75 344443333333332222 111 00
Q ss_pred -hhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHH-HHHHHHHHHHHHHHHh
Q 011416 381 -SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR-IGGMVCPLVAVALVAN 444 (486)
Q Consensus 381 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~~~~i~g~l~~~ 444 (486)
....+.+..++..+..+..........-+.+|+++|+.+.|+...+.. +|.+-+|+++|.+.|.
T Consensus 449 ~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 449 NKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------------------------------
T ss_pred cccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 001122222333334444455566677788999999999999987765 7889999999999986
No 121
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.71 E-value=1.4e-15 Score=146.51 Aligned_cols=374 Identities=14% Similarity=0.089 Sum_probs=257.6
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhh
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGL 105 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 105 (486)
.+.++++..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+++-+|+++++++++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 44555666777777778888889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCC-------------------C--------------------------------HH-HHHHHHHHHHhccCcc-hh
Q 011416 106 LSSFSP-------------------N--------------------------------YI-TLITLRCLVGVGLGSG-HV 132 (486)
Q Consensus 106 ~~~~a~-------------------~--------------------------------~~-~l~~~r~l~G~~~~~~-~~ 132 (486)
++++-+ + ++ .++++.++.|+|.... +.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 887620 0 22 5678899999999988 88
Q ss_pred hhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------------CcHHHHHHhHHHHHHHHH
Q 011416 133 FLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-------------------DWRWLLGLSSIPSFILLA 193 (486)
Q Consensus 133 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-------------------~w~~~f~~~~~~~~~~~~ 193 (486)
..+|+-|...+++-+..+|+..+...+|.++|.++++++...+ -|..-|++.+.+.++..+
T Consensus 258 GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 258 GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV 337 (735)
T ss_pred CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999975421 167777778888887777
Q ss_pred HhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhh
Q 011416 194 FLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF 273 (486)
Q Consensus 194 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (486)
.++++|++.+....+ .+.+ ..+..+..++ ..+.. ....++-+..+...
T Consensus 338 p~f~fPk~lp~~~~~---~~~~-~~~~~k~~~~----------------~~~~~------------~~~~~~ikdfp~s~ 385 (735)
T KOG3626|consen 338 PLFFFPKELPKSQKR---KRAR-DLHVLKTESG----------------GAKSD------------KTFGKKIKDFPKSI 385 (735)
T ss_pred HHHhCcccCcccccc---chhh-hhcccccccc----------------cccCC------------cchhhhHHHHHHHH
Confidence 888888764321111 0000 0000000000 00000 00000111122244
Q ss_pred HhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhh-HHHHHHHHHHH
Q 011416 274 LMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLA-EIPGLLLAAIL 352 (486)
Q Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~g~l 352 (486)
+.+++++. +....+........+.+...|+|.+. ..+++.++..+..+.....+. ..+|.+++|++
T Consensus 386 ~~ll~N~i---f~~~~l~~~~~~~~~~G~~tFlPKyL----------E~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~i 452 (735)
T KOG3626|consen 386 KRLLSNPI---FMLVVLASVIESLAITGYITFLPKYL----------ETQFGISASLANILTGSIGVPAAAVGIFLGGLI 452 (735)
T ss_pred HHHhcCch---HHHHHHHHHHHHHHHhhHHHhhHHHH----------HHHcCCCHHHHHHHhhhhhhhhhhhhhhcccee
Confidence 45555443 34444455566677777778888776 345689988888887655554 45778899999
Q ss_pred HHHhc--hhHHHHHHHHHHHHHHHH---Hhhh-----------------------c------------------------
Q 011416 353 VDTAG--RKLSITIMFTLSCLFLLP---LVTY-----------------------Q------------------------ 380 (486)
Q Consensus 353 ~dr~g--~~~~~~~~~~~~~~~~~~---~~~~-----------------------~------------------------ 380 (486)
..|+. .|.......+...+.++. ..+. .
T Consensus 453 ikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~ 532 (735)
T KOG3626|consen 453 IKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGEN 532 (735)
T ss_pred eeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCC
Confidence 99874 344443333333333222 2110 0
Q ss_pred ------------------h----------------------------------hHHHHHHHHHHHHhhhhhhhhHhhhcc
Q 011416 381 ------------------S----------------------------------NILTTGLLFGARMCVMGAFTVSLIYAA 408 (486)
Q Consensus 381 ------------------~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (486)
+ ...+++.+++..+..+...+..+.++.
T Consensus 533 G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~L 612 (735)
T KOG3626|consen 533 GITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVL 612 (735)
T ss_pred CCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEE
Confidence 0 011223333333444444567777888
Q ss_pred ccccccchhhHhHHHHHHHH-HHHHHHHHHHHHHHHh
Q 011416 409 EIYPTSVRSTGAGAANAMGR-IGGMVCPLVAVALVAN 444 (486)
Q Consensus 409 ~~~~~~~~~~~~g~~~~~~~-~g~~~~~~i~g~l~~~ 444 (486)
+.+++++|..++|+..++.. +|.+-+|+++|++.|.
T Consensus 613 R~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 613 RCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred EccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 99999999999999987765 8999999999999996
No 122
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.68 E-value=9.1e-14 Score=126.53 Aligned_cols=362 Identities=14% Similarity=0.058 Sum_probs=229.9
Q ss_pred hhhhchhchhhhh-cCCCcchhH-HHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHH
Q 011416 42 MILSFVGPTVKSE-WNLSSTEES-LITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITL 119 (486)
Q Consensus 42 ~~~~~~~~~~~~~-~~~s~~~~g-~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~ 119 (486)
-.-+.+.|.+.+. .|+|..|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+..+.++...+-+.
T Consensus 21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~ 100 (412)
T PF01770_consen 21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLM 100 (412)
T ss_pred CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHH
Confidence 3344555666665 799988874 56777778888899999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHhHHHHHHHHHHhhc
Q 011416 120 RCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP--RLDWRWLLGLSSIPSFILLAFLGF 197 (486)
Q Consensus 120 r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~--~~~w~~~f~~~~~~~~~~~~~~~~ 197 (486)
.+..|++.+...+..+++-...|+++..++.+...++..+|..++..+|..+.. ..+++...++......+.++..++
T Consensus 101 q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 101 QFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred HHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998878888999999999999999999999999999999999998876 445666666666555566677777
Q ss_pred cCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhh----
Q 011416 198 QPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLF---- 273 (486)
Q Consensus 198 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 273 (486)
+|..++...-+++.++..+ .++ .+ .+...+..+.. ++..+.++.........+
T Consensus 181 LP~~~~S~~f~r~~~~~~~-------~~~---~~----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~ 237 (412)
T PF01770_consen 181 LPMPKRSLFFHRKPPAEQD-------ANE---SE----------SDKMNESPESS---SSTEKSPSTESSSRKSVLRLLW 237 (412)
T ss_pred cCCCCcccceeccCccccc-------ccc---cc----------ccccccccccc---cccccCcccccchHHHHHHHHH
Confidence 8876543222222111100 000 00 00000000000 000000011111111122
Q ss_pred HhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHH
Q 011416 274 LMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILV 353 (486)
Q Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~ 353 (486)
+++++....+.++...+-+......++.+..+.+.+.... ...+.....-|..-....+.+.++.+..|++.
T Consensus 238 ~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v--------~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~ 309 (412)
T PF01770_consen 238 KDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTV--------PPSDNESVYNGAVEAASTLLGAIAALLAGYVK 309 (412)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhc--------CCCCCCcccchHHHHHHHHHHHHHHHHHhHhh
Confidence 2222111112222222222233334444444444443211 11123333345666666777778888888886
Q ss_pred HHhchhH--HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHH
Q 011416 354 DTAGRKL--SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGG 431 (486)
Q Consensus 354 dr~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 431 (486)
.++.+.. .+....++.+.+++++...++.|...+..++.+.......+....-++.....+.-|..+|+...+..+-.
T Consensus 310 ~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 310 VNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 5555533 33444555566666777788888888888888888888888888777777777777888888777665554
Q ss_pred HHH
Q 011416 432 MVC 434 (486)
Q Consensus 432 ~~~ 434 (486)
.+-
T Consensus 390 til 392 (412)
T PF01770_consen 390 TIL 392 (412)
T ss_pred Hhe
Confidence 443
No 123
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.66 E-value=2.1e-14 Score=136.32 Aligned_cols=343 Identities=16% Similarity=0.145 Sum_probs=215.0
Q ss_pred hchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh---c--chHHHHHHHHHHHHhhhhhhcC----CCHHH
Q 011416 45 SFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY---G--RRMGFLGEALVTAGAGLLSSFS----PNYIT 115 (486)
Q Consensus 45 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~---G--~r~~~~~~~~~~~~~~~~~~~a----~~~~~ 115 (486)
....|.+.+++|+++++.....+...+...+ -++.|.++|-+ | ||+-++++.++.+++.+.++.. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3456788999999999999999998888876 58899999976 2 5555666777765555555443 35666
Q ss_pred HHHHHHHHHhccCcc-hhhhhhhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHH
Q 011416 116 LITLRCLVGVGLGSG-HVFLSWFLEFV--PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILL 192 (486)
Q Consensus 116 l~~~r~l~G~~~~~~-~~~~~~i~~~~--~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~ 192 (486)
..+.-++..+|.... ..+-+.+.|.. .|++||...+.......+|.+++..++|.+.+..++|..|.+.+++.++..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 667778888888877 66668888877 344578888999999999999999999999999999999998887777665
Q ss_pred HHhhccCCCchhhhhcCCh---HH-HHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCC
Q 011416 193 AFLGFQPESPRYLCLKGRT---AE-AHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKS 268 (486)
Q Consensus 193 ~~~~~~~e~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (486)
+..+++.|+.+.....+.. ++ ........ +.
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~ 203 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSF---------------------------------------------RE 203 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHH---------------------------------------------HH
Confidence 5444443321100000000 00 00000000 00
Q ss_pred chhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-cccCCCCccc---cCCCCCchhHHHHHHHHhhHHH
Q 011416 269 GLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSL-DTRCRSPLMF---SHHPQDANLYIDEFITSLAEIP 344 (486)
Q Consensus 269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~ 344 (486)
.....++.++.+........ . ..++. ..+..... ..+ ...+ .-++++...+....+..++.++
T Consensus 204 ~~~~l~~~~~~~~i~~~~~~--~-----~~~~~---~~~~~~~a~~fy---~~~~~~~gp~fs~~f~~~~~~vg~~~~l~ 270 (433)
T PF03092_consen 204 QLSELWRALQQRAIWQPILF--F-----IFFFN---LPPSISSASSFY---FQTDALGGPHFSPSFYGTLSIVGSIASLL 270 (433)
T ss_pred HHHHHHHHHhhhHHHHHHHH--H-----HHHHH---hccCCCCccEEE---EEeccccccccCHHHHHHHHHHHHHHHHH
Confidence 01122222222221111110 0 00000 00100000 000 0011 2237777777777777788888
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh----------hchhHHHHHHHHHHHHhhhhhhhhHhhhcccccccc
Q 011416 345 GLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT----------YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 414 (486)
Q Consensus 345 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (486)
|..+..+...+..-|+++....++.++..+.-.. .++.+....-..+..+.....+-+...+.+|+.|+.
T Consensus 271 g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G 350 (433)
T PF03092_consen 271 GILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKG 350 (433)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 8888877777777788877766666554433211 011122233334444444555566777889999999
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011416 415 VRSTGAGAANAMGRIGGMVCPLVAVALVANCH 446 (486)
Q Consensus 415 ~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g 446 (486)
.-|+.+++..++.++|..++..+...+.+..+
T Consensus 351 ~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 351 SEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999888766
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.64 E-value=1.3e-15 Score=122.08 Aligned_cols=135 Identities=20% Similarity=0.256 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCC
Q 011416 66 TTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPS 144 (486)
Q Consensus 66 ~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~ 144 (486)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...++++++.+.+.+++.|++.+.. +...+++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567888999999999999999999999999999999998888999999999999999998887 67778899999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHH-hhccCC
Q 011416 145 NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF-LGFQPE 200 (486)
Q Consensus 145 ~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~-~~~~~e 200 (486)
+|++..++.+....+|..+++.+.+.+.+..+|++.+++.++..++..+. .+..||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999899999999888777766544 333443
No 125
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=4.2e-15 Score=141.60 Aligned_cols=157 Identities=15% Similarity=0.074 Sum_probs=128.8
Q ss_pred chhchhhhhcCCCc--------chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC----CH
Q 011416 46 FVGPTVKSEWNLSS--------TEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP----NY 113 (486)
Q Consensus 46 ~~~~~~~~~~~~s~--------~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~----~~ 113 (486)
...+.+.++.|.++ ++.+.+.++..++..++.++.|+++||+|+|+++..+.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 44455556666443 5679999999999999999999999999999999999999988877666632 24
Q ss_pred HHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHhcC------CCcHHHHHHhH
Q 011416 114 ITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFS-SFWTIGSVSEAIGAWIIMPR------LDWRWLLGLSS 185 (486)
Q Consensus 114 ~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~i~~~l~~~l~~~------~~w~~~f~~~~ 185 (486)
+.+++.+++.|++.+.. +....++.|++|+++|+++.|+.+ ...++|.++||++++.+.++ +||+..|.+.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 66778899999998877 666788999999999999999997 67889999999999999886 56999999888
Q ss_pred HHHHHH-HHHhhccCCCc
Q 011416 186 IPSFIL-LAFLGFQPESP 202 (486)
Q Consensus 186 ~~~~~~-~~~~~~~~e~~ 202 (486)
++.++. .+..++++|+.
T Consensus 389 ~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHHhCCcc
Confidence 877775 44466667653
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.62 E-value=1.2e-14 Score=137.87 Aligned_cols=154 Identities=13% Similarity=0.095 Sum_probs=127.0
Q ss_pred chhch-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHH
Q 011416 46 FVGPT-VKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVG 124 (486)
Q Consensus 46 ~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 124 (486)
...|. +++++|.+..+.+++.+...++..++.+++|+++||+|||+.+..+.....+.......+++.+.+++.+++.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34454 55778999999999988888888889999999999999999888877666665555566778888888999988
Q ss_pred hccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCC
Q 011416 125 VGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 200 (486)
Q Consensus 125 ~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e 200 (486)
++.+.. .....+..|..|+ +|+++.++.+...++|..+++.+++.+.+..||+..|++.+++.++.++..++.||
T Consensus 317 ~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 877766 5555677788874 69999999999999999999999999999899999999888888777766666654
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.61 E-value=1.3e-14 Score=139.17 Aligned_cols=149 Identities=7% Similarity=-0.047 Sum_probs=127.0
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-h
Q 011416 53 SEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-H 131 (486)
Q Consensus 53 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~ 131 (486)
.+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++..+.++++|.+.+++.+++.|++.+.. +
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 344667778899999999999999999999999999999999999999999899999999999999999999988776 5
Q ss_pred hhhhhhccccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHH-hhccCCC
Q 011416 132 VFLSWFLEFVPPSNRGMWMVI-FSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF-LGFQPES 201 (486)
Q Consensus 132 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~-~~~~~e~ 201 (486)
....++.|.+|++.|+...+. ++....+|.++++.+.+.+.+..||+..|.+.+++.++..++ .+.++++
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 666788899999999887655 677788999999999999999999999999988877665443 4444443
No 128
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.6e-14 Score=129.04 Aligned_cols=185 Identities=13% Similarity=0.053 Sum_probs=156.2
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHh
Q 011416 277 FSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA 356 (486)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~ 356 (486)
.++.+.+.++..++.+.+..+.--.+..-.|.+ .++.+++..+.+.+.+...+..-++.++.|.++||.
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l-----------~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~ 91 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPAL-----------IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS 91 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHH-----------HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Confidence 334343444444444444444444444444433 356679999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHH
Q 011416 357 GRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPL 436 (486)
Q Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~ 436 (486)
+.|..+..+++++++..+++.+.++.+.+.++..+-|.+.+...|.....+.+-+|+++||+..++-|+..++|+.+.|.
T Consensus 92 npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~ 171 (448)
T COG2271 92 NPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPL 171 (448)
T ss_pred CCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH--HHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 437 VA--VALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 437 i~--g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
+. +.+.++.+|...|+.-++++++.+++.+...+++
T Consensus 172 ~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 172 VALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99 8999988999999999999988888877776544
No 129
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.59 E-value=3.7e-14 Score=141.34 Aligned_cols=139 Identities=14% Similarity=0.076 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhcccc
Q 011416 63 SLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFV 141 (486)
Q Consensus 63 g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~ 141 (486)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+.. +...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677899999999999999999999999999999999999999999888888898888877766 77778999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCCCc
Q 011416 142 PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESP 202 (486)
Q Consensus 142 ~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~ 202 (486)
|.++|++++|+.++...+|.+++|.+++.+.+. +...+|++.+++.++..++..++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999987663 456788888777777766666778864
No 130
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.59 E-value=1e-13 Score=132.08 Aligned_cols=180 Identities=10% Similarity=-0.044 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHH
Q 011416 283 RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSI 362 (486)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~ 362 (486)
+.+...++.+.....-........+.+ .++++.+..+.++..+...++..++.+..|++.||+|||+++
T Consensus 8 ~~~~~~~~~~~~~~~d~~~~~~~~~~l-----------~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~ 76 (412)
T TIGR02332 8 RLIIFLFILFIFSFLDRINIGFAGLTM-----------GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI 76 (412)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhh-----------HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH
Confidence 444444445554444444444445533 356789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 363 TIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 442 (486)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~ 442 (486)
..+.++..++.+...+.++.+.+.+.-++.|++.+...+....++.|.+|+++|+++.|+.+....+|..+++.+.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 77 AGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888888888999999988988899999999999999999999999999999999999887
Q ss_pred H------hhccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 443 A------NCHQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 443 ~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
+ ..||+..|.+.++..++..++.+++.||++
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 5 358999999888777766666666655554
No 131
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.58 E-value=1.6e-13 Score=131.81 Aligned_cols=147 Identities=11% Similarity=0.025 Sum_probs=128.3
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.+..+.++..+...++..++.++.|++.||+|||+++.++.++.+++.++....++.+...+..++.+++.+...+
T Consensus 51 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~ 130 (434)
T PRK11663 51 ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWP 130 (434)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccch
Confidence 45689999999999999999999999999999999999999999999999888887777777777767777888888888
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
....++.|.+|+++|++++|+.+...++|..++|.+.+.+.+..||+..+.+.+++.++..++..+.
T Consensus 131 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~ 197 (434)
T PRK11663 131 VCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWR 197 (434)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999888777666554444433
No 132
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=1e-13 Score=131.35 Aligned_cols=172 Identities=12% Similarity=-0.043 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHH
Q 011416 287 LLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMF 366 (486)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~ 366 (486)
.+....++....++....+.+.+. .+++|.+..+.++..+...+..+++.++.|+++||+|||+++.++.
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l----------~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYL----------SRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI 80 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----------HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Confidence 333444444444444444444332 2346899999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011416 367 TLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH 446 (486)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g 446 (486)
++.+++.+.+.+.++.+...+...+.+.+.+...+....+..|..|+++|+++.|+.+...++|..++|.+.+.+.+ .+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g 159 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS 159 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 88888887777766666555555556666666677888999999999999999999999999999999999998875 68
Q ss_pred cchHHHHHHHHHHHHHHHHhccc
Q 011416 447 QMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
+...|...+++.++..++..+..
T Consensus 160 ~~~~f~~~~~~~~i~~i~~~~~~ 182 (395)
T PRK10054 160 INLPFWLAAICSAFPLVFIQIWV 182 (395)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777776655554433
No 133
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.58 E-value=1.4e-13 Score=128.84 Aligned_cols=149 Identities=17% Similarity=0.028 Sum_probs=129.9
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.+..+.++..+...++..++.++.|+++||+|||+++..+.++.+++.+...+.++.+...+..++.|++.+...+
T Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 104 (352)
T PF07690_consen 25 EELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSP 104 (352)
T ss_dssp CCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccc
Confidence 45678999999999999999999999999999999999999999999988855554445666778888899999999999
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..+|...+++.+++.++..++...+.+
T Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 105 ASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC-
T ss_pred cccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhh
Confidence 999999999999999999999999999999999999999998888999999999998888775444443
No 134
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.58 E-value=1.8e-13 Score=129.66 Aligned_cols=150 Identities=11% Similarity=-0.020 Sum_probs=132.4
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.++.+.++..+...++..++.++.|++.||+|||+.+..+.++.+++.+.....++.+..++.-++.|++.+...+
T Consensus 48 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 127 (394)
T PRK10213 48 QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWA 127 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHH
Confidence 56689999999999999999999999999999999999999999999998888887778888888888899999999999
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
....++.|.+|+++|+.+.++.....+++..++|.+.+.+.+..+|...|++.+++.+++.+......|+
T Consensus 128 ~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~ 197 (394)
T PRK10213 128 MSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPS 197 (394)
T ss_pred HHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999999999999999998988877666655444433344
No 135
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.58 E-value=1.5e-12 Score=115.36 Aligned_cols=179 Identities=18% Similarity=0.147 Sum_probs=125.2
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEAL 98 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~ 98 (486)
..+.|+.-+.+-.++... .-..+|..-.+-+++|.+..|++.+....+....+..++.|.++||+|||+.-+.-++
T Consensus 32 f~~Fqr~yl~vY~La~~a----DWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~ci 107 (354)
T PF05631_consen 32 FRRFQRKYLLVYLLAMAA----DWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCI 107 (354)
T ss_pred HHHHHHHHHHHHHHHHHH----HHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 445555544444443333 3344565556667899999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhh-cccc----CCCchhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 011416 99 VTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWF-LEFV----PPSNRGMWMVIFS-SFWTIGSVSEAIGAWII 171 (486)
Q Consensus 99 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~G~~i~~~l~~~l 171 (486)
+.+++++ +-..+|++.++++|++.|++.... .+--+++ .|.- |++..+..++... ...++-.+++..++..+
T Consensus 108 ly~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 108 LYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 9999886 555689999999999999999888 5555654 4553 2333344444333 23344445556666677
Q ss_pred hcCCCc--HHHHHHhHHHHHHHHHH-hhccCCCc
Q 011416 172 MPRLDW--RWLLGLSSIPSFILLAF-LGFQPESP 202 (486)
Q Consensus 172 ~~~~~w--~~~f~~~~~~~~~~~~~-~~~~~e~~ 202 (486)
.+..+. ..+|.....+.++..++ ....+|+.
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 665554 77888877766665433 33445543
No 136
>PRK03545 putative arabinose transporter; Provisional
Probab=99.58 E-value=1.4e-13 Score=130.54 Aligned_cols=150 Identities=10% Similarity=-0.036 Sum_probs=132.8
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
+++|.++.+.++..+...++..++.+..|.+.||+|||+++..+..+.+++.+...+.++.+...+.-++.|++.+...+
T Consensus 37 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 116 (390)
T PRK03545 37 QSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWS 116 (390)
T ss_pred hHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999988888888888887777888888877888
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
...+++.|.+|+++|++++|+......+|..++|.+.+.+.+..||+..|++.+++.++..+..+...|+
T Consensus 117 ~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 186 (390)
T PRK03545 117 ITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPL 186 (390)
T ss_pred HHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8899999999999999999999999999999999999999999999999999888877766655554443
No 137
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.57 E-value=2.1e-13 Score=123.68 Aligned_cols=179 Identities=12% Similarity=-0.009 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhH
Q 011416 281 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 360 (486)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~ 360 (486)
.....+.+....|+.....+...-..|.+. ++++.+...+|...+.+..+..++.++...+.||+.||+
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA-----------~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~ 79 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIA-----------ADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRR 79 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHH-----------HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 345556666677777777777777778666 567899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHH
Q 011416 361 SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVA 440 (486)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~ 440 (486)
++.....+..++.++..+.++.+.+.+.=++.++..+..++...+...++.|+++|+++.++......++..+|..+..+
T Consensus 80 lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 80 LLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccchHHHHHHHHHHHHHHHHhcccc
Q 011416 441 LVANCHQMTAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 441 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
+-|..||+.+|+..+++.+++.+..+...|
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999988888877
No 138
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.57 E-value=2.3e-14 Score=135.53 Aligned_cols=146 Identities=13% Similarity=0.039 Sum_probs=125.9
Q ss_pred chhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCH--HHHHHHHHHH
Q 011416 46 FVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNY--ITLITLRCLV 123 (486)
Q Consensus 46 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~--~~l~~~r~l~ 123 (486)
...+.+.++++.+..+.+++.+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++. ..++...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 34455678899999999999999999999999999999999999999999999998888887777643 3345667888
Q ss_pred HhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHH
Q 011416 124 GVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL 191 (486)
Q Consensus 124 G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~ 191 (486)
|++.+.. +....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..||+..|.+.+++.++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8888776 5566788899999999999999999999999999999999999999999998887776654
No 139
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.57 E-value=9.1e-14 Score=130.11 Aligned_cols=163 Identities=24% Similarity=0.285 Sum_probs=143.9
Q ss_pred HHHHhhHhhhhchhchhhhhc-CCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchH-HHHHHHHHHHHhhhhhhcCCC
Q 011416 35 VAEAMEIMILSFVGPTVKSEW-NLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRM-GFLGEALVTAGAGLLSSFSPN 112 (486)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~-~~~~~~~~~~~~~~~~~~a~~ 112 (486)
+.............|.+.++. |.+..+.+++.+...++..++.++.|++.||+|||+ .+..+..+..++.+...+.++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 333444444555566666654 999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHH
Q 011416 113 YITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL 191 (486)
Q Consensus 113 ~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~ 191 (486)
.+.+.+..++.|++.+.. +....++.|..|+++|++.+++.+...++|..+++.+.+.+.+..+|+..+.+.+++.++.
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~ 344 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLA 344 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence 999999999999999988 7778899999999999999999999999999999999999999999999999999888887
Q ss_pred HHHhhc
Q 011416 192 LAFLGF 197 (486)
Q Consensus 192 ~~~~~~ 197 (486)
.+...+
T Consensus 345 ~i~~~~ 350 (352)
T cd06174 345 ALLLLL 350 (352)
T ss_pred HHHhee
Confidence 665544
No 140
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.57 E-value=1.2e-13 Score=131.04 Aligned_cols=152 Identities=16% Similarity=0.067 Sum_probs=134.4
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.++.+.++..+...++..++.++.|++.||+|||+.+..+.++.+++.+.....++.+...+..++.+++.+...+
T Consensus 33 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 112 (385)
T TIGR00710 33 ADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSV 112 (385)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHH
Confidence 45678999999999999999999999999999999999999999999888888887777777777788888888888889
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|...+++.+++.++..+..+...||++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 113 ISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999989998888888877777666665555544
No 141
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=1e-13 Score=132.43 Aligned_cols=157 Identities=15% Similarity=0.074 Sum_probs=128.9
Q ss_pred hhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHH
Q 011416 43 ILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCL 122 (486)
Q Consensus 43 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 122 (486)
......|.+.++.|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+..+.+..+++.++..+.++.+.+.+..++
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFA 317 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 33445677778899999999999999999999999999999999999999988877777777777778888888888888
Q ss_pred HHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHhHHHHHHHHHHhhccC
Q 011416 123 VGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-DWRWLLGLSSIPSFILLAFLGFQP 199 (486)
Q Consensus 123 ~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~ 199 (486)
.|++.+.. +...+++.|.+|+++|++..|+.+....+|..++|.+++.+.++. +|...++......++..+..+++.
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 88877666 667788899999999999999999999999999999999998865 455566655555555444444433
No 142
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.55 E-value=1.7e-13 Score=130.65 Aligned_cols=154 Identities=16% Similarity=0.089 Sum_probs=129.3
Q ss_pred chhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHh
Q 011416 46 FVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGV 125 (486)
Q Consensus 46 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 125 (486)
...|.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.+|.+.+++.+++.|+
T Consensus 237 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 314 (399)
T PRK05122 237 TFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGF 314 (399)
T ss_pred HHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 334444555565 345677788889999999999999999999999999999888888888888898888899999999
Q ss_pred ccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCCC
Q 011416 126 GLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPES 201 (486)
Q Consensus 126 ~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 201 (486)
+.+.. +.....+.|..|+++|+++.++++....+|..+++++.+.+.+..||+..|++.+++.++..+...+++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 98877 56566777899999999999999999999999999999999999999999999888877766555555443
No 143
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.55 E-value=1.2e-13 Score=130.55 Aligned_cols=149 Identities=14% Similarity=0.126 Sum_probs=125.7
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCc
Q 011416 50 TVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGS 129 (486)
Q Consensus 50 ~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~ 129 (486)
.+.+++|.+..+.+++.+.......++.++.|++.||+|||+++..+.++..+......+.++.+.+.+.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577899999999998888888888899999999999999999888777666666666677888888899999998887
Q ss_pred c-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccC
Q 011416 130 G-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQP 199 (486)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 199 (486)
. +....++.|..|+ +++++.++.+....+|..++|.+++.+.+..||+..|++.+++.++..+...+++
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 7 6666778888765 5679999999999999999999999999999999999998888777766665554
No 144
>PRK10504 putative transporter; Provisional
Probab=99.54 E-value=4.6e-13 Score=130.54 Aligned_cols=178 Identities=12% Similarity=-0.006 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHH
Q 011416 283 RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSI 362 (486)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~ 362 (486)
+.++..+...+......+......|.+. ++.|.++.+.++......++..++.++.|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~-----------~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~ 78 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMA-----------QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF 78 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHH-----------HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 4455556666666666666666666554 45688989988888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 363 TIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 442 (486)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~ 442 (486)
..+..+.+++.+.....++.+...+..++.|++.+...+.....+.|.+|+++|++++|+.+...++|..++|.+.|.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 98888888777776666777777778888899988889999999999999999999999999999999999999999999
Q ss_pred HhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 443 ANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 443 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
+..+|...|.+...+..+..+......++
T Consensus 159 ~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 159 EYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999988888877776666665555443
No 145
>TIGR00895 2A0115 benzoate transport.
Probab=99.54 E-value=2.1e-13 Score=130.10 Aligned_cols=174 Identities=18% Similarity=0.082 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHH
Q 011416 288 LWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFT 367 (486)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~ 367 (486)
.....+.............|.+. +++|.+..+.++......++.+++.++.|+++||+|||+.+..+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 90 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAIS-----------AEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSIL 90 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHh-----------hccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHH
Confidence 33344444444444445555443 4567888999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011416 368 LSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~ 447 (486)
+.+++.++....++.+...+..++.+++.+...+...++..|.+|++.|+++.++.+....+|..++|.+.+.+.+..+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 91 LFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 88888888777777777777888888988889999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhcccccc
Q 011416 448 MTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
...+.+.+++.++..++.+...+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCC
Confidence 8888887666665555555444443
No 146
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.54 E-value=1.3e-13 Score=130.29 Aligned_cols=155 Identities=10% Similarity=-0.059 Sum_probs=133.9
Q ss_pred hhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHH
Q 011416 39 MEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLIT 118 (486)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~ 118 (486)
..........|.+.+++|.+..+.|++.+...++..+..++.+++.||+|+|+.+.++.++.++..++.++++|.+.+++
T Consensus 219 ~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHH
Confidence 33333444556666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHh
Q 011416 119 LRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFS-SFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFL 195 (486)
Q Consensus 119 ~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 195 (486)
.+++.|++.+.. +....++.+. |+++|++..++++ ...++|.++++.++|.+.++.|+ ..|++.++++++.+++.
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 999999999998 7777888887 8999999999986 57789999999999999999997 66777777776654443
No 147
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.53 E-value=6.3e-13 Score=127.13 Aligned_cols=169 Identities=16% Similarity=0.150 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHH
Q 011416 282 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLS 361 (486)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~ 361 (486)
++.+...++.++...+..+......+.+. ++.+.+..+.++..+...++..++.++.|++.||+|||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~ 79 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVA-----------GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP 79 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34445555556666666666666666544 4568899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHH
Q 011416 362 ITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVAL 441 (486)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l 441 (486)
+..+.++.+++.+...+.++.+......++.|++.+...+...+++.|..|+++|+++.++.+....+|..+++.+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 80 MVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888877778888888888899998999999999999999999999999999999999999999999998
Q ss_pred HHhhc--cchHHHHHHHHHHHH
Q 011416 442 VANCH--QMTAVVLLVVVIVTS 461 (486)
Q Consensus 442 ~~~~g--~~~~~~~~~~~~~~~ 461 (486)
.+..+ |...+.+.+...++.
T Consensus 160 ~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 160 VPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHhcCccHHHHHHHHHHHHHHH
Confidence 88766 776666554444433
No 148
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.53 E-value=8.8e-13 Score=128.83 Aligned_cols=177 Identities=15% Similarity=0.038 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHH
Q 011416 285 TILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITI 364 (486)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~ 364 (486)
...+++..+....-...+..-.|.+. ++.|.+..+.++....+.++...+.+..|+++||+|||+.+..
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~-----------~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~ 76 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLS-----------MTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLML 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 33344444444444444445555544 4567888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccc-cccchhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 365 MFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIY-PTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 443 (486)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~ 443 (486)
+..+.+++.+.....++.+..++.-.+.|++.+...+.....+.+.+ |+++|++++|+......+|..++|.+.|.+.+
T Consensus 77 ~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 77 GGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999988888888888888888889988888887777776655 67899999999999999999999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 444 NCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 444 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
+.+|++.|++...+.++..++.....|+.
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988877777766666655554
No 149
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.53 E-value=7e-13 Score=126.16 Aligned_cols=174 Identities=14% Similarity=0.090 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHh-chhHH
Q 011416 283 RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA-GRKLS 361 (486)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~-g~~~~ 361 (486)
+.++..+...+...+.+|++..+.+.+.. +..|.++.+++...........++.+++|+++||+ |||+.
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~----------~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ 78 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLT----------NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA 78 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence 44555555666677788888877776652 24588999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHhhhc-hhHHHHHHHHHHHHhhhhhhhhHhhhcccccccc--chhhHhHHHHHHHHHHHHHHHHHH
Q 011416 362 ITIMFTLSCLFLLPLVTYQ-SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS--VRSTGAGAANAMGRIGGMVCPLVA 438 (486)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~i~ 438 (486)
+.++.++..++.+++.... +.........+..++.+...+...++..|.+|++ .|.++.++.+...++|+.++|.+.
T Consensus 79 iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 79 VMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence 9999999888876665422 2222333333444555666677788899999875 699999999999999999999999
Q ss_pred HHHHHhhccchHHHHHHHHHHHHHHHHh
Q 011416 439 VALVANCHQMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 439 g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 466 (486)
|++.+..||+..|.+.++..+++.+..+
T Consensus 159 g~L~~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 159 GYAQEEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887665555444443
No 150
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.53 E-value=6.2e-13 Score=128.58 Aligned_cols=175 Identities=15% Similarity=0.022 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH-hchhHHH
Q 011416 284 TTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKLSI 362 (486)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~ 362 (486)
.++.++...++..+.+|+...+.+.+.+.. ...|.+..+++.......++..++.+++|+++|| +|||+.+
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~--------~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l 82 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQ--------AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM 82 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH
Confidence 344455566667778888777777664210 0168899999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccc---hhhHhHHHHHHHHHHHHHHHHHHH
Q 011416 363 TIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV---RSTGAGAANAMGRIGGMVCPLVAV 439 (486)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~g~~~~~~i~g 439 (486)
.++.++.+++.+++...++.+...+...+.+++.+...+...++..+.+|+++ |+++.++.+...++|..++|.+.+
T Consensus 83 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g 162 (475)
T TIGR00924 83 VLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAG 162 (475)
T ss_pred HHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHH
Confidence 99999999998888876666666666677788888888889999999988754 888999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHHHHHHh
Q 011416 440 ALVANCHQMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 440 ~l~~~~g~~~~~~~~~~~~~~~~~~~~ 466 (486)
++.++.+|...|...++..+++.+...
T Consensus 163 ~l~~~~g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 163 VIAENYGYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 999998999888887765555544433
No 151
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.52 E-value=1.9e-13 Score=130.24 Aligned_cols=151 Identities=13% Similarity=0.024 Sum_probs=134.5
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.+..+.++......++..++.++.|++.||+|||+.+..+.++.+++.+.....++.+...+..++.|++.+...+
T Consensus 22 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 101 (399)
T TIGR00893 22 EDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFP 101 (399)
T ss_pred HhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhh
Confidence 34578899999999999999999999999999999999999999998888888888777888888888899999999999
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..+|...+...+++.++..+..+...+++
T Consensus 102 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 102 GIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDP 172 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCC
Confidence 99999999999999999999999999999999999999999999999999888887777666665554443
No 152
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.52 E-value=1.6e-12 Score=126.15 Aligned_cols=178 Identities=13% Similarity=0.138 Sum_probs=132.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchh
Q 011416 280 KLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK 359 (486)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~ 359 (486)
+..+.+...+...+......+....+.+.+. +++|.+..+.+...+...++..++.++.|+++||+|||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r 101 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIR-----------DNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR 101 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3345555555555555555555555555443 56688889999888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHH
Q 011416 360 LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 439 (486)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g 439 (486)
+++..+.++.+++.++.....+.+...+..++.|++.+... ....++.|.+|+++|+++.|+.+...++|..+++.+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~ 180 (476)
T PLN00028 102 YGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMP 180 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888777777677666666667777665543 34567889999999999999999888888888877766
Q ss_pred HHHH----h-----hccchHHHHHHHHHHHHHHHHhccc
Q 011416 440 ALVA----N-----CHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 440 ~l~~----~-----~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.+.+ . .||+..|++.+++.++..+..+++.
T Consensus 181 ~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 181 LVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 5533 1 4788899988888777666665554
No 153
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.52 E-value=2.6e-13 Score=129.82 Aligned_cols=154 Identities=14% Similarity=0.089 Sum_probs=127.2
Q ss_pred hhhchhchhhhhcCCCcc----hhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHH
Q 011416 43 ILSFVGPTVKSEWNLSST----EESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLIT 118 (486)
Q Consensus 43 ~~~~~~~~~~~~~~~s~~----~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~ 118 (486)
...+..+.+.++.+.+.. ..+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 334445555555433333 2466677778888999999999999999999999999888888888888888999999
Q ss_pred HHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhh
Q 011416 119 LRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLG 196 (486)
Q Consensus 119 ~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 196 (486)
.+++.|++.+.. +...+.+.+..++++||+.+++......+|..+||.+++.+.+..||+..|++.+++.++..+..+
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 999999999888 666677888889999999999999999999999999999999999999999999888777655443
No 154
>PRK03699 putative transporter; Provisional
Probab=99.52 E-value=1.4e-12 Score=123.78 Aligned_cols=173 Identities=13% Similarity=0.114 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHH
Q 011416 283 RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSI 362 (486)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~ 362 (486)
+.++..++.++.............|.+. ++++.+..+.++......++..++.++.|++.||+|||+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~-----------~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~ 75 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIA-----------EYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL 75 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHH-----------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 4444444444444444455555555544 45678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 363 TIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 442 (486)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~ 442 (486)
..+..+.+++.++....++.+...+..++.+++.+...+.....+.|.+|+++|+.+.+..+....+++.++|.+.+.+.
T Consensus 76 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 76 IFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888887777777777777788888888888888889999999999999999998888899999999998876
Q ss_pred H-hhccchHHHHHHHHHHHHHHHHh
Q 011416 443 A-NCHQMTAVVLLVVVIVTSILSVM 466 (486)
Q Consensus 443 ~-~~g~~~~~~~~~~~~~~~~~~~~ 466 (486)
+ ..+|+..+...+++.++..++.+
T Consensus 156 ~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 156 ARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHH
Confidence 5 46888888887777666554443
No 155
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.52 E-value=8.5e-13 Score=126.03 Aligned_cols=152 Identities=16% Similarity=0.016 Sum_probs=129.8
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++++.++.+.+.......++..++.++.|+++||+|||+.+..+..+.+++.+.....++.+......++.|++.+...+
T Consensus 41 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 120 (406)
T PRK15402 41 EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGA 120 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHH
Confidence 56678889999999999999999999999999999999999999888888888777777777777777777887777778
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
...+.+.|.+|++.+.++.++......++..++|.+.+.+.+..+|...+++.+++.+++.+..+...||++
T Consensus 121 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 121 VGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 888889999999999999999988888999999999999999889999998888887777666555555543
No 156
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.52 E-value=4.9e-13 Score=131.07 Aligned_cols=151 Identities=13% Similarity=-0.029 Sum_probs=134.5
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.+..+.++......++.+++.++.|++.||+|||+.+..+.++..++.++....++.+...+..++.|++.+...+
T Consensus 30 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~ 109 (485)
T TIGR00711 30 GDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIP 109 (485)
T ss_pred HhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHH
Confidence 45678888999999999999999999999999999999999999999999888888888888888888889999898999
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
...+++.|.+|+++|+++.++......+|..++|.+.+++.++.+|...+++.+.+.++..++..+..+++
T Consensus 110 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 110 LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999888777776666655555443
No 157
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=3.2e-13 Score=128.33 Aligned_cols=150 Identities=14% Similarity=0.091 Sum_probs=127.3
Q ss_pred hhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHH
Q 011416 44 LSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLV 123 (486)
Q Consensus 44 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 123 (486)
.....|.+.++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (392)
T PRK12382 235 IGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALT 312 (392)
T ss_pred HHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 334445555566654 456667778888899999999999999999999999999999888888889998888899999
Q ss_pred HhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHh
Q 011416 124 GVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFL 195 (486)
Q Consensus 124 G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 195 (486)
|++.+.. +...+.+.|.+|+++|+++.|+.+....+|..++|.+.+.+.++.||+..|.+.+++.++..+..
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 313 GAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 9998877 66667788999999999999999999999999999999999999999999999888777765443
No 158
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.51 E-value=1.1e-12 Score=128.85 Aligned_cols=167 Identities=17% Similarity=0.130 Sum_probs=138.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhch
Q 011416 279 SKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR 358 (486)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~ 358 (486)
+..++.+..+++.++...+.........+.+. +++|.+..+.+.......++..++.++.|++.||+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----------~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 84 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQ-----------GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGR 84 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 34444555555555555566555555556443 4567889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHH
Q 011416 359 KLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 438 (486)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~ 438 (486)
|+.+..+.++.+++.+.....++.+...+..++.|++.+...+....++.|.+|+++|+.+.++.+....+|..++|.+.
T Consensus 85 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 164 (496)
T PRK03893 85 RLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVY 164 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888778888888888889988888899999999999999999999999999999999999999
Q ss_pred HHHHHhhccchHHHHHHH
Q 011416 439 VALVANCHQMTAVVLLVV 456 (486)
Q Consensus 439 g~l~~~~g~~~~~~~~~~ 456 (486)
+.+.+..+|...+.+...
T Consensus 165 ~~l~~~~~w~~~f~~~~~ 182 (496)
T PRK03893 165 SLVVPVWGWRALFFIGIL 182 (496)
T ss_pred HHHhccCCHHHHHHHHHH
Confidence 999998888887765433
No 159
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.51 E-value=7.3e-13 Score=124.73 Aligned_cols=145 Identities=12% Similarity=-0.020 Sum_probs=125.4
Q ss_pred CCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-----hhHHHHHHHHHHHHhhhh
Q 011416 324 HHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ-----SNILTTGLLFGARMCVMG 398 (486)
Q Consensus 324 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 398 (486)
.+.++.+.++..+...++.+++.++.|+++||+|||+.+..+..+..++.+...... +.+...+..++.+++.+.
T Consensus 29 ~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 108 (365)
T TIGR00900 29 GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAF 108 (365)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 457888999999999999999999999999999999999998888777776666544 677777788888898888
Q ss_pred hhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 399 AFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
..+...++..|..|+++|++++++.+....+|..++|.+.+.+.+..+|...+++.+...+++.+..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 109 FTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999999999888887776666655544443
No 160
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.51 E-value=8.8e-13 Score=125.36 Aligned_cols=152 Identities=14% Similarity=0.091 Sum_probs=130.1
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.+.+..+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+.....++.+...+..++.+++.+...+
T Consensus 31 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 110 (392)
T PRK10473 31 ADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYV 110 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHH
Confidence 44578888999999999999999999999999999999999999988888888877777766666677778888888888
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..+|...+.+.+++.++..++.....+|++
T Consensus 111 ~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 111 VAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 889999999999999999999999999999999999998888889988888888877777666655555544
No 161
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=5e-13 Score=128.04 Aligned_cols=158 Identities=16% Similarity=0.097 Sum_probs=134.6
Q ss_pred hchhchhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHH
Q 011416 45 SFVGPTVKSE-WNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLV 123 (486)
Q Consensus 45 ~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 123 (486)
....|.+.++ +|.+..+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.+..++.
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 3455666666 899999999999999999999999999999998888888888888888888888889988888889999
Q ss_pred HhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHH-HHHhhccCCC
Q 011416 124 GVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQPES 201 (486)
Q Consensus 124 G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~-~~~~~~~~e~ 201 (486)
|++.+.. +...+++.|..|++.||+++|+......+|..+|+.+.+.+.+..|++..++..++..++. .+....+++.
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 9988776 5556788899999999999999999999999999999999999999999988877766554 4555555654
Q ss_pred c
Q 011416 202 P 202 (486)
Q Consensus 202 ~ 202 (486)
+
T Consensus 403 ~ 403 (417)
T PRK10489 403 R 403 (417)
T ss_pred c
Confidence 3
No 162
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.51 E-value=7.7e-13 Score=125.07 Aligned_cols=151 Identities=9% Similarity=-0.019 Sum_probs=132.6
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.+..+.++..+...++..++.++.|++.||+|||+.+..+..+.+++.++....++.+.+.+..++.|++.+...+
T Consensus 31 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~ 110 (382)
T PRK10091 31 HDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFG 110 (382)
T ss_pred HHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHH
Confidence 55688899999999999999999999999999999999999999999999988888888888888888888988888888
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
.......|..|+++|+.++++......++..++|.+.+.+.+..+|...+.+.+.+.++..+..+...|+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 111 VGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88888899999999999999999999999999999999999988999999988887776665555445553
No 163
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.50 E-value=6.5e-13 Score=128.97 Aligned_cols=170 Identities=14% Similarity=0.097 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHhhHhhhhchhch-hhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhh-
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPT-VKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAG- 104 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~- 104 (486)
+...++..++.+..........|. +.+++|.|..+.++..+...++..++.+++|+++||+|||+.+.....+..++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 334444455544444445555665 457799999999999999999999999999999999999988766544444333
Q ss_pred -hhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHhc--------
Q 011416 105 -LLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTI-GSVSEAIGAWIIMP-------- 173 (486)
Q Consensus 105 -~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~i~~~l~~~l~~-------- 173 (486)
+.....++.+.+.+.+++.|++.... ........|.+|+++||++.|+.+...++ |..++|.+.|.+.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 22334567777778888888654333 33335666999999999999999998886 77999999999988
Q ss_pred ----CCCcHHHHHHhHHHHHHHHHHhh
Q 011416 174 ----RLDWRWLLGLSSIPSFILLAFLG 196 (486)
Q Consensus 174 ----~~~w~~~f~~~~~~~~~~~~~~~ 196 (486)
..+|+..|++.++..++..+..+
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHH
Confidence 57899999988777766554443
No 164
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.50 E-value=1.8e-12 Score=123.35 Aligned_cols=151 Identities=13% Similarity=-0.001 Sum_probs=126.9
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.+.++.+.++......++..++.++.|+++||+|||+.+..+..+..++.+.....++.+...+..++.+++.+...+
T Consensus 36 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 115 (394)
T PRK11652 36 RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGV 115 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHH
Confidence 45689999999999999999999999999999999999999999888888887777777777777777777887777777
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
.......|.+++++++.+.++.+....++..++|.+.+.+.+..+|...+.+.+++.++..+......||+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (394)
T PRK11652 116 MARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPET 186 (394)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 77788888888889999999999999999999999999999988999888887776665555444444454
No 165
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.49 E-value=1.3e-12 Score=124.40 Aligned_cols=152 Identities=13% Similarity=0.025 Sum_probs=130.3
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++++.+....+...+.+.++..++.++.|+++||+|||+++..+..+.+++.+.....++.+.+.+.-++.|++.+...+
T Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~ 123 (413)
T PRK15403 44 RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIAT 123 (413)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678888999999999999999999999999999999999999988888888887777877777777888887766666
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
.......|.+|++++++++++.+....++..++|.+.+.+.+..||...|++.+++.+++.+..+...||++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 124 VGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 677888899999999999999999999999999999999998889999999888887777666555555543
No 166
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.49 E-value=2.8e-12 Score=121.76 Aligned_cols=149 Identities=8% Similarity=-0.111 Sum_probs=127.7
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.+..+.++......+...+..++.|+++||+|||+.+..+..+.+++.+.+...++.+...+..++.+++.+...+
T Consensus 39 ~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~ 118 (400)
T PRK11646 39 DQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDP 118 (400)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999888888777777777777778888777788
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
...+++.+..|+++|++++|+.+...++|..++|.+.|.+. ..++...+++.+.+.++..++.....++
T Consensus 119 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 119 PRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 88899999999999999999999999999999999999998 6688888888777766665554444443
No 167
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.49 E-value=1.4e-12 Score=125.50 Aligned_cols=160 Identities=15% Similarity=0.105 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHH
Q 011416 285 TILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITI 364 (486)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~ 364 (486)
....++.++......+......+.+. ++.|.++.+.++..+...++..++.++.|+++||+|||+.+..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~-----------~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIK-----------ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH-----------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 44444444444444444444445333 4567888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 365 MFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVAN 444 (486)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~ 444 (486)
+.++.+++.+.....++.+...+.-++.|++.+..++....++.|.+|+++|+++.++......+|..+++.+.+.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~ 168 (426)
T PRK12307 89 SIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA 168 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc
Confidence 99999998888888888888888888899999989999999999999999999999999999999999999999988888
Q ss_pred hccchHHHHHH
Q 011416 445 CHQMTAVVLLV 455 (486)
Q Consensus 445 ~g~~~~~~~~~ 455 (486)
.+|...+++..
T Consensus 169 ~~w~~~f~i~~ 179 (426)
T PRK12307 169 YGWRAAFFVGL 179 (426)
T ss_pred CCHHHHHHHHH
Confidence 88888887644
No 168
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.49 E-value=2.6e-13 Score=130.90 Aligned_cols=159 Identities=11% Similarity=0.075 Sum_probs=126.6
Q ss_pred HHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh--cchHHHHH--HHHHHHHhhhhhhcC
Q 011416 35 VAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY--GRRMGFLG--EALVTAGAGLLSSFS 110 (486)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~--G~r~~~~~--~~~~~~~~~~~~~~a 110 (486)
++...........+|.+.+++|.+..+.+++.++..++..+++++.|+++||. ++|+...+ +.++.+++.++...+
T Consensus 251 ~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~ 330 (455)
T TIGR00892 251 VIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA 330 (455)
T ss_pred HHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333334455667778899999999999999999999999999999983 34443333 344445555666778
Q ss_pred CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHhHHHH
Q 011416 111 PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-DWRWLLGLSSIPS 188 (486)
Q Consensus 111 ~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-~w~~~f~~~~~~~ 188 (486)
+|++.+++.+++.|++.+.. +...+++.|.+|++++++.+|+++...++|.++||.+++.+.+.. +|+..|++.+++.
T Consensus 331 ~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~ 410 (455)
T TIGR00892 331 GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIV 410 (455)
T ss_pred chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHH
Confidence 89999999999999998887 666788889999999999999999999999999999999998877 5999999988776
Q ss_pred HHHHH
Q 011416 189 FILLA 193 (486)
Q Consensus 189 ~~~~~ 193 (486)
++..+
T Consensus 411 li~~~ 415 (455)
T TIGR00892 411 VSAGL 415 (455)
T ss_pred HHHHH
Confidence 65443
No 169
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.48 E-value=1.2e-12 Score=124.56 Aligned_cols=163 Identities=13% Similarity=0.100 Sum_probs=124.6
Q ss_pred HHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHH-HHHHHHHHhhhhhh----
Q 011416 34 WVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFL-GEALVTAGAGLLSS---- 108 (486)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~-~~~~~~~~~~~~~~---- 108 (486)
.+.............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444555678888889999999999999999999999999999999999988764 33333333332222
Q ss_pred -cCCCHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHH
Q 011416 109 -FSPNYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIP 187 (486)
Q Consensus 109 -~a~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~ 187 (486)
..++++.+++..++.|++.+...+....+.|. +|++|+++.|+.+....+|..++|.+++.+.+..||+..+++.+++
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGYVPLAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 23567777888888998877663344555665 4578999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhc
Q 011416 188 SFILLAFLGF 197 (486)
Q Consensus 188 ~~~~~~~~~~ 197 (486)
.++..+...+
T Consensus 390 ~~i~~~~~~~ 399 (402)
T TIGR00897 390 YVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHH
Confidence 7776555444
No 170
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.48 E-value=3e-12 Score=123.78 Aligned_cols=147 Identities=12% Similarity=-0.011 Sum_probs=115.3
Q ss_pred CCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh----chhHHHHHHHHHHHHhhhhhh
Q 011416 325 HPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY----QSNILTTGLLFGARMCVMGAF 400 (486)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 400 (486)
+.+..+.++..+...++..++.++.|+++||+|||+++.++.++.+++.+.+.+. .+.+...+..++.+++.+...
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~ 138 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGW 138 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccc
Confidence 7899999999999999999999999999999999999999988888877766653 244555666677788888777
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHH-HHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMV-CPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
+.....+.+.+|+++|++++|+.+....+|+.+ +|.+...+....+|...+++.+++.++..++.+++.++
T Consensus 139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~ 210 (452)
T PRK11273 139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRD 210 (452)
T ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 877788889999999999999999998888654 55443333334478888888777776665555555444
No 171
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.48 E-value=1.5e-12 Score=123.12 Aligned_cols=150 Identities=16% Similarity=0.133 Sum_probs=123.5
Q ss_pred chhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHh
Q 011416 46 FVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGV 125 (486)
Q Consensus 46 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 125 (486)
..+|.+.++.|.+.++.|++.+...++..+++++.|++.||+|+|+++..+..+.+++.+... + ........++.|+
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~ 297 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGA 297 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHH
Confidence 346777777899999999999999999999999999999999999999888888777665443 2 2334456777887
Q ss_pred ccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhcc
Q 011416 126 GLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQ 198 (486)
Q Consensus 126 ~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 198 (486)
+.... |...+++.|..|+++++...+......++|.++||.+++.+.++.+|++.|.+.+.+.++..+...+.
T Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 298 AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 76655 77778888999988888888888889999999999999999999999999999888777665554443
No 172
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.47 E-value=9.2e-13 Score=124.64 Aligned_cols=151 Identities=15% Similarity=0.045 Sum_probs=132.6
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.|.++.+.+...+...++..++.++.|++.||+|||+.+..+.++.+++.+.+...++.+...+..++.+++.+...+
T Consensus 19 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 98 (377)
T PRK11102 19 ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASV 98 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999988888888777777777778888888888888
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|...+.+.+.+.++..+......+|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 99 VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 89999999999999999999999999999999999999999988998888888877777766655555444
No 173
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.47 E-value=4.2e-13 Score=127.04 Aligned_cols=151 Identities=13% Similarity=0.032 Sum_probs=130.7
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.+.+..+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.++....++.+...+..++.+++.+...+
T Consensus 23 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 102 (379)
T TIGR00881 23 EEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWP 102 (379)
T ss_pred HHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCC
Confidence 34578999999999999999999999999999999999999999999999888888888888888888888998888899
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHH-HHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP-LVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~-~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
...+++.|.+|+++|+++.++.+....+|..++| .+.+.+.+..+|...+.+.+.+.++..++.+...+++
T Consensus 103 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 103 PCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred chHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 9999999999999999999999999999999999 4666677777888888888777776666665555443
No 174
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.46 E-value=3e-12 Score=123.28 Aligned_cols=148 Identities=16% Similarity=0.053 Sum_probs=120.4
Q ss_pred CCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh----chhHHHHHHHHHHHHhhhhh
Q 011416 324 HHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY----QSNILTTGLLFGARMCVMGA 399 (486)
Q Consensus 324 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 399 (486)
.|.++.+.++......++..++.++.|+++||+|||+.+..+.++.+++.+..... .+.+...+..++.+++.+..
T Consensus 56 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~ 135 (438)
T TIGR00712 56 QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMG 135 (438)
T ss_pred cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcc
Confidence 47899999999999999999999999999999999999988888888777665542 23444455566777777777
Q ss_pred hhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH-hhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 400 FTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA-NCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
++.....+.|.+|+++|++++|+.+...++++.++|.+.+...+ ..+|+..|++.+++.++..+..+++.+|
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 78888888999999999999999999999999999988776554 4688888888888877766655555444
No 175
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.46 E-value=5.5e-12 Score=118.85 Aligned_cols=170 Identities=17% Similarity=0.170 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHH
Q 011416 288 LWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFT 367 (486)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~ 367 (486)
.+...+......+....+.|.+. .++.|.++.+.++......++..++.++.|+++||+|||+.+.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 75 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMI----------KDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLL 75 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHH----------HHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 44444444555555555555311 24568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhc-hhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHh--
Q 011416 368 LSCLFLLPLVTYQ-SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVAN-- 444 (486)
Q Consensus 368 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~-- 444 (486)
+.+++.+.+...+ +.+...+..++.|++.+ ..+....++.|.+|+++|+.+.++.....++|..+++.+.+.+.+.
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 154 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLI 154 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 9999888887776 77777777777777644 4566778899999999999999999988888888888887776653
Q ss_pred --------hccchHH-HHHHHHHHHHHHHHhcc
Q 011416 445 --------CHQMTAV-VLLVVVIVTSILSVMLI 468 (486)
Q Consensus 445 --------~g~~~~~-~~~~~~~~~~~~~~~~~ 468 (486)
.+|...+ +..+.+..+..++.+..
T Consensus 155 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 187 (366)
T TIGR00886 155 FGAGLPAHLAWGWAFVIVPAGILLLPALLIFFV 187 (366)
T ss_pred hcccccccccccchhHHHHHHHHHHHHHHHHHh
Confidence 2677777 33344444444444333
No 176
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.45 E-value=3.3e-12 Score=119.19 Aligned_cols=151 Identities=9% Similarity=-0.072 Sum_probs=120.9
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++++.++.+.++..+...++..++.+..|+++||+|||+++.........+.+.....++...+.+.-++.|++.+. ..
T Consensus 19 ~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~ 97 (368)
T TIGR00903 19 EDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LL 97 (368)
T ss_pred HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HH
Confidence 45678999999999999999999999999999999999877655544444333222235666777777788888775 45
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
.......|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+..|.+.+++.++..++.++..||.+
T Consensus 98 ~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 98 NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 555566899999999999999999999999999999999999999999999988888777776666666543
No 177
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.45 E-value=3.1e-12 Score=121.28 Aligned_cols=163 Identities=15% Similarity=0.069 Sum_probs=124.5
Q ss_pred hhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC-CHHHHH
Q 011416 39 MEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP-NYITLI 117 (486)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~-~~~~l~ 117 (486)
..........|.+.+++|.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..+.+++..+....+ +...+
T Consensus 219 ~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 297 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL- 297 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH-
Confidence 3334444556666677899999999999999999999999999999999999999998888777776554333 33222
Q ss_pred HHHHHHHhccCcc-hhhhhhhccccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cHHHHHHhHHHHHHHHH-
Q 011416 118 TLRCLVGVGLGSG-HVFLSWFLEFVP-PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD-WRWLLGLSSIPSFILLA- 193 (486)
Q Consensus 118 ~~r~l~G~~~~~~-~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~- 193 (486)
.-++.|++.+.. +.......+..+ ++++++..|+.+....++..++|.+.+++.+..| |+..|++.++..++..+
T Consensus 298 -~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK09705 298 -WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMII 376 (393)
T ss_pred -HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 234668887776 655555666664 5789999999999999999999999999999875 88888887776666543
Q ss_pred HhhccCCCch
Q 011416 194 FLGFQPESPR 203 (486)
Q Consensus 194 ~~~~~~e~~~ 203 (486)
...+.||++.
T Consensus 377 ~~~~~~~~~~ 386 (393)
T PRK09705 377 TLRFAPARFP 386 (393)
T ss_pred HHHhcccccc
Confidence 3555676643
No 178
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.45 E-value=4.9e-12 Score=122.37 Aligned_cols=170 Identities=11% Similarity=-0.004 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH-hchhHH
Q 011416 283 RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKLS 361 (486)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~ 361 (486)
+.++..+...+...+.+|+...+.+.+.+ ++.|.+..++......+.....+..+++|+++|| +|||+.
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~----------~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~ 83 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFV----------KQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRT 83 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHH
Confidence 45555666667777888888777776542 3457888888888888887778888899999999 999999
Q ss_pred HHHHHHHHHHHHHHHhhhchhH-HHHHHHHHHHHhhhhhhhhHhhhccccccccc--hhhHhHHHHHHHHHHHHHHHHHH
Q 011416 362 ITIMFTLSCLFLLPLVTYQSNI-LTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV--RSTGAGAANAMGRIGGMVCPLVA 438 (486)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~~~~i~ 438 (486)
+.++.++.+++.+.+....+.. ...+...+.+++.+...|...+++.|.+|+++ |+.++++.+...++|..++|.+.
T Consensus 84 ~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 84 IVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 9999999999888877754422 34455667788888888999999999998774 57789999999999999999999
Q ss_pred HHHHHhhccchHHHHHHHHHHHHH
Q 011416 439 VALVANCHQMTAVVLLVVVIVTSI 462 (486)
Q Consensus 439 g~l~~~~g~~~~~~~~~~~~~~~~ 462 (486)
|++.++.||+..|++.++..+++.
T Consensus 164 g~l~~~~gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 164 PVIADKFGYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHHHHhhChHHHHHHHHHHHHHHH
Confidence 999999999988887655444333
No 179
>PRK11043 putative transporter; Provisional
Probab=99.45 E-value=7.3e-12 Score=119.46 Aligned_cols=148 Identities=16% Similarity=0.101 Sum_probs=126.5
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.+.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+.....++.+...+..++.|++.+...+
T Consensus 34 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 113 (401)
T PRK11043 34 ADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAV 113 (401)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHH
Confidence 45678999999999999999999999999999999999999998888888877777777777777777777777777777
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
...+...|.+|+++++...+..+....++..++|.+.+.+.+..+|+..+++.+++.++..+..+...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 114 IWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcC
Confidence 77888899999998999999999889999999999999999999999888888877777666555444
No 180
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.45 E-value=6.1e-12 Score=115.69 Aligned_cols=146 Identities=12% Similarity=0.097 Sum_probs=128.6
Q ss_pred CCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhH
Q 011416 324 HHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVS 403 (486)
Q Consensus 324 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (486)
.+..+..-|......-.+.++..++.+++.+|+|+-+++.+++...++-++.+....++|....+-++-++..+..+...
T Consensus 401 ~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 401 LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHH
Confidence 34555566666777778888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccchhhHhHHHHHHH-HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccc
Q 011416 404 LIYAAEIYPTSVRSTGAGAANAMG-RIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 404 ~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.++++...|++.++++.|+..... .+|-.+|.+++|.+.+.++....|.++++.+++.+++...+.
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999987765 599999999999999999999999999888887776655543
No 181
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.44 E-value=9.4e-12 Score=121.11 Aligned_cols=170 Identities=12% Similarity=-0.027 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH-hchhHHH
Q 011416 284 TTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKLSI 362 (486)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~ 362 (486)
.++..+...++..+.+|....+.+.+. .++.|.+..+++..............+++|+++|| +|||+.+
T Consensus 22 ~~~~~~~~~~~~~~~~y~~~~~l~~yl----------~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~ 91 (500)
T PRK09584 22 AFYLIFSIELWERFGYYGLQGIMAVYL----------VKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI 91 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 345555666667777777777766554 23467888877777766655555556789999999 5999999
Q ss_pred HHHHHHHHHHHHHHhhhc-hhHHHHHHHHHHHHhhhhhhhhHhhhccccccccc--hhhHhHHHHHHHHHHHHHHHHHHH
Q 011416 363 TIMFTLSCLFLLPLVTYQ-SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV--RSTGAGAANAMGRIGGMVCPLVAV 439 (486)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~~~~i~g 439 (486)
..+.++.+++..++.+.. +.+...+...+.+++.+...+...++..|.+|++. ++.+.++.+...++|..++|.+.|
T Consensus 92 ~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g 171 (500)
T PRK09584 92 MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP 171 (500)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHH
Confidence 999999888877776643 33444455566778877778888889999997643 456788889999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHHHH
Q 011416 440 ALVANCHQMTAVVLLVVVIVTSIL 463 (486)
Q Consensus 440 ~l~~~~g~~~~~~~~~~~~~~~~~ 463 (486)
++.+..||+..|.+.++..+++.+
T Consensus 172 ~l~~~~g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 172 WLAAKYGWSVAFALSVVGMLITVV 195 (500)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHH
Confidence 999999999988887765555443
No 182
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.43 E-value=1.5e-12 Score=123.89 Aligned_cols=158 Identities=15% Similarity=0.043 Sum_probs=120.4
Q ss_pred HHHHHHHhhHhhhhchhchhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhh--hhhh
Q 011416 32 LGWVAEAMEIMILSFVGPTVK-SEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAG--LLSS 108 (486)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~--~~~~ 108 (486)
...+.............|.+. +++|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+.. ....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 226 GLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444555566655 7789999999999999999999999999999999999998776554443332 2222
Q ss_pred c--CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHH-HHHHHHHHHHHHHHHHHHhcCCC-cHHHHHH
Q 011416 109 F--SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIF-SSFWTIGSVSEAIGAWIIMPRLD-WRWLLGL 183 (486)
Q Consensus 109 ~--a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~i~~~l~~~l~~~~~-w~~~f~~ 183 (486)
+ .++.+.+.+..++.|++.+.. ++..+++.|.+|+++|+++.++. +.+..+|..++|.+++.+.++.| |+..++.
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 306 LLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 2 356777778888889888777 77778999999999999999984 56667899999999999999888 9887776
Q ss_pred hHHHHH
Q 011416 184 SSIPSF 189 (486)
Q Consensus 184 ~~~~~~ 189 (486)
..+..+
T Consensus 386 ~~~~~l 391 (394)
T TIGR00883 386 LAALAL 391 (394)
T ss_pred HHHHHH
Confidence 655444
No 183
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.43 E-value=3.3e-12 Score=125.08 Aligned_cols=178 Identities=16% Similarity=0.099 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhh
Q 011416 25 FVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAG 104 (486)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 104 (486)
..+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33344444444444444445566788888999999889999999999999999999999999999999999888888777
Q ss_pred hhhhc-----CC------CHHHHHHHHHHH-HhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 105 LLSSF-----SP------NYITLITLRCLV-GVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM 172 (486)
Q Consensus 105 ~~~~~-----a~------~~~~l~~~r~l~-G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~ 172 (486)
++.++ .+ +...+....++. +.+.+..+....++.|.+|+++|++++++.+...++|.++++.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66652 12 222233333332 3333333555667789999999999999999999999999999999998
Q ss_pred cCCCcHHHHHHhHHHHHHHHHH-hhccCCCc
Q 011416 173 PRLDWRWLLGLSSIPSFILLAF-LGFQPESP 202 (486)
Q Consensus 173 ~~~~w~~~f~~~~~~~~~~~~~-~~~~~e~~ 202 (486)
++.+|++.|++.++++++..+. .++.||++
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 8899999999988887776554 44456543
No 184
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.7e-13 Score=123.90 Aligned_cols=158 Identities=15% Similarity=-0.028 Sum_probs=143.9
Q ss_pred cCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhh
Q 011416 323 SHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTV 402 (486)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (486)
.++.++...+++.....+...+.++++|++.||++|++++.+|..+-.++.+...+....|.+.+.=.+.|++.....|+
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~i 141 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPI 141 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhccc
Confidence 35788999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred HhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHhcccccccCCCcccc
Q 011416 403 SLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH-QMTAVVLLVVVIVTSILSVMLIPFETKGQELSDT 480 (486)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (486)
.+++++|.+|.++|++.+++.+.....|+.+|-...+.+.+..+ |+.++...+++.++++++..++.+|++++..++.
T Consensus 142 a~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~ 220 (493)
T KOG1330|consen 142 APSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEV 220 (493)
T ss_pred chhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccccccc
Confidence 99999999999999999999999999999999888888888777 8999999999999999999888877765444433
No 185
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.41 E-value=2.1e-12 Score=103.30 Aligned_cols=135 Identities=16% Similarity=0.146 Sum_probs=115.9
Q ss_pred HHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccch
Q 011416 337 ITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR 416 (486)
Q Consensus 337 ~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (486)
...++.+++.++.+++.||+|||+.+..+.....++.+.....++.+......++.+++.+...+....+..|..|+++|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 44677888999999999999999999988888888877777667777777778888888888889999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 417 STGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 417 ~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
+++.++.+....++..++|.+.+.+.+..++...+.+.+.+.+++.+..+...+|
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999988888888888887777777666665543
No 186
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.41 E-value=4.9e-11 Score=112.38 Aligned_cols=148 Identities=12% Similarity=0.073 Sum_probs=117.0
Q ss_pred cCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-----chhHHHHHHHHHHHHhhh
Q 011416 323 SHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY-----QSNILTTGLLFGARMCVM 397 (486)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 397 (486)
++++++.+.++..+...+...+.++..|++.||+|.|+++.++.++..+..+...+. ++.+.+.+.-++.|++ +
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g 142 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-G 142 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-H
Confidence 578999999999999999999999999999999999999999998888888777764 6777777888888886 7
Q ss_pred hhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH-----Hhhc-------------cchHHHHHHHHHH
Q 011416 398 GAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV-----ANCH-------------QMTAVVLLVVVIV 459 (486)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~-----~~~g-------------~~~~~~~~~~~~~ 459 (486)
..++.....+++.+|+++||++.|+....+++|..+++.+.+.+. +..| ++.+.++...+.+
T Consensus 143 ~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~i 222 (462)
T PRK15034 143 ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLA 222 (462)
T ss_pred HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHH
Confidence 788889999999999999999999998777777776666555433 3222 4445556666666
Q ss_pred HHHHHHhccccc
Q 011416 460 TSILSVMLIPFE 471 (486)
Q Consensus 460 ~~~~~~~~~~~~ 471 (486)
+..++.++..++
T Consensus 223 v~~i~~~~~~~~ 234 (462)
T PRK15034 223 IATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHhCCC
Confidence 666666655443
No 187
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.41 E-value=1.3e-11 Score=110.93 Aligned_cols=179 Identities=16% Similarity=0.035 Sum_probs=140.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhch
Q 011416 279 SKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR 358 (486)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~ 358 (486)
+...+.++.............+......+.+. +++++|+.+.+++.....+.+.+.++..|.+.||+|.
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~-----------~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGg 78 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIK-----------SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGG 78 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----------cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCc
Confidence 44444444444444444444444444444332 5779999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhch---hHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHH
Q 011416 359 KLSITIMFTLSCLFLLPLVTYQS---NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 435 (486)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 435 (486)
|++...+.++..+-.+...+... .+..+++-++.|++ ++.+.+....+++.+|+|++|.++|+.. .+|+|..+..
T Consensus 79 R~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q 156 (417)
T COG2223 79 RKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQ 156 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHH
Confidence 99999999998887777766332 23555555555554 6778899999999999999999999999 9999999999
Q ss_pred HHHHHHHHhhc---cchHHHHHHHHHHHHHHHHhcccc
Q 011416 436 LVAVALVANCH---QMTAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 436 ~i~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
++.+.+....+ |+....+.....++..+..++..+
T Consensus 157 ~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 157 LVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999888 888888888888888887777654
No 188
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.41 E-value=4e-11 Score=116.68 Aligned_cols=154 Identities=13% Similarity=0.099 Sum_probs=119.8
Q ss_pred hhchhhhhcCCCcchhHHHHH-HHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhh---hhcC-CCHHHHHHHHH
Q 011416 47 VGPTVKSEWNLSSTEESLITT-SVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLL---SSFS-PNYITLITLRC 121 (486)
Q Consensus 47 ~~~~~~~~~~~s~~~~g~~~s-~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~---~~~a-~~~~~l~~~r~ 121 (486)
..|.+.+++|.+..+.+++.+ ...++..++.+++|+++||+|+|+.+.++.++.+++.++ .+.. ++.+.+.+.-+
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 345556779999999999974 666899999999999999999999887766655554432 2333 45555555666
Q ss_pred HHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCC
Q 011416 122 LVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPE 200 (486)
Q Consensus 122 l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e 200 (486)
+..++.|.. ....++..+..+++.+++..++.+...++|..+++.+.|.+.+..||+..|.+.++++++.++...++++
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 655555544 4556778889999999999999999999999999999999999999999999988888887666555544
No 189
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.41 E-value=5.1e-12 Score=119.52 Aligned_cols=146 Identities=10% Similarity=-0.076 Sum_probs=122.7
Q ss_pred hhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhc
Q 011416 47 VGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVG 126 (486)
Q Consensus 47 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 126 (486)
..|.+.+|.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..++.|++
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGT 306 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 34555577999999999999999999999999999999999999999999999999888888899999999999999999
Q ss_pred cCcc-hhhhhhhccccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHH
Q 011416 127 LGSG-HVFLSWFLEFVPPSNRGMWMVIFS-SFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF 194 (486)
Q Consensus 127 ~~~~-~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 194 (486)
.+.. +....++.+. +++++++..+... ...++|..+||.++|.+.+..|+ ..|+..+++.++.++.
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 8877 6666777776 5667788888886 55678889999999999999998 4666666666554433
No 190
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.40 E-value=6.4e-12 Score=107.92 Aligned_cols=177 Identities=17% Similarity=0.080 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHH
Q 011416 23 QCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAG 102 (486)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~ 102 (486)
||..+....... ......+.++..-|++++++|+|.+|...+.++..+|..+ +++.|.+.||+|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~-~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQ-LCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHH-HhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 455544444433 4445677888889999999999999999999999999987 58899999999999999999999999
Q ss_pred hhhhhhcC-------CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 011416 103 AGLLSSFS-------PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR 174 (486)
Q Consensus 103 ~~~~~~~a-------~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~ 174 (486)
|..+...+ .++|.+.+..++.|.+.+.. ........+.+| ++||++.|+.-...+++..+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 98877553 46888888888888887766 555555668886 6899999999999999998887777776655
Q ss_pred CCcHHHHHHhHHHHHHHHHHhhccCCCc
Q 011416 175 LDWRWLLGLSSIPSFILLAFLGFQPESP 202 (486)
Q Consensus 175 ~~w~~~f~~~~~~~~~~~~~~~~~~e~~ 202 (486)
-.-+..+.....+.++.++...+++..|
T Consensus 158 ~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 158 DPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred ChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 3344444333334444455555554443
No 191
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.39 E-value=9.9e-12 Score=119.96 Aligned_cols=151 Identities=16% Similarity=0.089 Sum_probs=134.3
Q ss_pred hhchhchhh-hhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHH
Q 011416 44 LSFVGPTVK-SEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCL 122 (486)
Q Consensus 44 ~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 122 (486)
+...+|.+. +++|.+....|++.+++.+|..++++..+++.+|+++++.+..+.++.+++.+..+++++.+..++..++
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l 316 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFL 316 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 334567665 5689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHH
Q 011416 123 VGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF 194 (486)
Q Consensus 123 ~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 194 (486)
.|++.... ....+.+.+..|++.|||++++++.....+..+|..+.|.+.+..|.+..+.+.++..++..++
T Consensus 317 ~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 317 AGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 99998877 5666788899999999999999999999999999999999999999999998877655554433
No 192
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.39 E-value=8.8e-12 Score=121.28 Aligned_cols=149 Identities=13% Similarity=-0.055 Sum_probs=128.1
Q ss_pred cCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh--hchhHHHHHHHHHHHHhhhhhh
Q 011416 323 SHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT--YQSNILTTGLLFGARMCVMGAF 400 (486)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 400 (486)
+++.+..+.+.....+.++.+++.++.|++.||+|+|+.+..+.++..++.++... ..+.+..++.-++.|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 56888999999999999999999999999999999999999988887777666543 2345566777788899999999
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHhccccc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC-HQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
+....++.|.+|+++|++++|+.+....+|..++|.+.+.+.+.. +|+..|.+.+++.++..++.+.+.++
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999884 99999998888777766665555433
No 193
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.39 E-value=2.2e-11 Score=115.41 Aligned_cols=135 Identities=11% Similarity=-0.029 Sum_probs=110.3
Q ss_pred cCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhh
Q 011416 323 SHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTV 402 (486)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (486)
+.+.++...++....+.+...+..++.|++.||+|||+++..+..+.+++.+.+....+. .+..++.|++.+...|.
T Consensus 32 ~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa 108 (393)
T PRK11195 32 ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPA 108 (393)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 346777888999999999999999999999999999999999998887766665544333 34456778888999999
Q ss_pred HhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHH
Q 011416 403 SLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTS 461 (486)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 461 (486)
..+++.|.+|+++|++++|+.+....++..+||.+.|.+.+.. +...+.+.+.+.+++
T Consensus 109 ~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 109 KYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998864 444444444443333
No 194
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.38 E-value=3.3e-11 Score=117.97 Aligned_cols=160 Identities=14% Similarity=0.033 Sum_probs=119.6
Q ss_pred hhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcC--CC-HH-HHHH
Q 011416 43 ILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFS--PN-YI-TLIT 118 (486)
Q Consensus 43 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a--~~-~~-~l~~ 118 (486)
......|.+.++.|.+..+.++......+...++.++.|+++||+|||++++.+..+.+++.++.+.. ++ .+ ....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 33445688888899988888888888888999999999999999999999999999988887766533 12 11 2223
Q ss_pred HHHHHHhccCcc--hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH------hcCCCcHHHHHHhHHHHHH
Q 011416 119 LRCLVGVGLGSG--HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII------MPRLDWRWLLGLSSIPSFI 190 (486)
Q Consensus 119 ~r~l~G~~~~~~--~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l------~~~~~w~~~f~~~~~~~~~ 190 (486)
+.++.+++.+.. +....++.|.+|+++|++++|+......+|.++++.+.+.+ .+..+|+..|++.++.+++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 344444444332 55678899999999999999999999999998886655543 3578899999888877666
Q ss_pred HHHH-hhccCCCc
Q 011416 191 LLAF-LGFQPESP 202 (486)
Q Consensus 191 ~~~~-~~~~~e~~ 202 (486)
..+. +++.||+.
T Consensus 449 ~~~~~~~~~~e~~ 461 (479)
T PRK10077 449 AALFMWKFVPETK 461 (479)
T ss_pred HHHHHHhccccCC
Confidence 5444 44556653
No 195
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.37 E-value=1.8e-11 Score=116.39 Aligned_cols=139 Identities=9% Similarity=-0.005 Sum_probs=118.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhh
Q 011416 56 NLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFL 134 (486)
Q Consensus 56 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~ 134 (486)
+.+..+.|.+.++..+...++.++.|++.||+|+|+.+.++..+.+++..+...++|.+.+++.+++.|++.+.. ....
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677899999999999999999999999999999999999999998888888899999999999999987655 3445
Q ss_pred hhhccccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHH
Q 011416 135 SWFLEFVPPSNRGMWMVI-FSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF 194 (486)
Q Consensus 135 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 194 (486)
.+..+..+++.++...+. .+....+|..+++.+++.+.+..||+..|.+.+++.++..+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 567777788878776665 678899999999999999999999999999988887775443
No 196
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.36 E-value=5.5e-11 Score=112.99 Aligned_cols=169 Identities=15% Similarity=0.049 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHH
Q 011416 286 ILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIM 365 (486)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~ 365 (486)
..++..++...+.+.......|.+. ++++.+..+.++..+...++..++.+..|++.||+|||+.+..+
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~-----------~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g 74 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQ-----------QAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHH-----------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 3444444444444444445555443 45689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh---hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 366 FTLSCLFLLPLVT---YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 442 (486)
Q Consensus 366 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~ 442 (486)
..+.+++.+++.. .++.+......++.|++.+...+....++.+..|++++++..++.+...++|..++|.+.+.+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888877543 3456667777788899999999998999999999999999999999999999999999998875
Q ss_pred Hh--------------------------hccchHHHHHHHHHHHHHHHH
Q 011416 443 AN--------------------------CHQMTAVVLLVVVIVTSILSV 465 (486)
Q Consensus 443 ~~--------------------------~g~~~~~~~~~~~~~~~~~~~ 465 (486)
.. .+|+.++.+.+++.++..++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 346777777777666554443
No 197
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=3.9e-11 Score=115.41 Aligned_cols=152 Identities=13% Similarity=0.018 Sum_probs=112.9
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc---C-CCHHHHHHHHHHHHh
Q 011416 50 TVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF---S-PNYITLITLRCLVGV 125 (486)
Q Consensus 50 ~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~---a-~~~~~l~~~r~l~G~ 125 (486)
.+.+++|.+..+...+.....+...++.++.|+++||+|||+++..+.++..++.+.... . ++.+.+++..++.|+
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 445678888877666666677777888999999999999999998887766555433322 2 334455556677788
Q ss_pred ccCcc-hhhhhhhccccCCCchhHHHHHHHH-HHHHHHHHHHHHHHHHhcCC--CcHHHHHHhHHHHHHHHHHhhccCCC
Q 011416 126 GLGSG-HVFLSWFLEFVPPSNRGMWMVIFSS-FWTIGSVSEAIGAWIIMPRL--DWRWLLGLSSIPSFILLAFLGFQPES 201 (486)
Q Consensus 126 ~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~i~~~l~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~~~e~ 201 (486)
+.+.. +...+++.|.+|++.|+...++... +..+|..++|.+.+.+.+.. +|+..+...++..++..+..+.++|+
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 87766 6667889999999999988888554 45589999999999987743 58888887777777766665566654
No 198
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.36 E-value=5.2e-12 Score=111.89 Aligned_cols=154 Identities=16% Similarity=0.073 Sum_probs=141.5
Q ss_pred cCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhh
Q 011416 323 SHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTV 402 (486)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (486)
..+.+..+.|+++....+.+++..++.|.+.||+|+|..+.+|++++....+++.+.++.+..++.=.+.|++.....+.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 44667788999999999999999999999999999999999999999999999999999998999999999999999999
Q ss_pred Hhhhccccccccc-hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCCC
Q 011416 403 SLIYAAEIYPTSV-RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQE 476 (486)
Q Consensus 403 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (486)
..+++++.+|++. |++++|+.-.+..+|..++|.++|.++|..|+..+|++++.++++-..+.++..+.++.++
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 9999999999866 6999999999999999999999999999999999999999999999888887775544443
No 199
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=2.2e-11 Score=115.63 Aligned_cols=148 Identities=10% Similarity=0.041 Sum_probs=112.7
Q ss_pred hhchhhhhcCCCcchhHHHHHHHHH-HHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhh------cCCCHHHHHHH
Q 011416 47 VGPTVKSEWNLSSTEESLITTSVFA-GLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSS------FSPNYITLITL 119 (486)
Q Consensus 47 ~~~~~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~------~a~~~~~l~~~ 119 (486)
..+.+.+|.|++.+++|++.+.... ...++.++.|++.||+|+|+.+..+..+.++..+... ..++...+...
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 3455666789999999999888764 6667789999999999999999887766533322221 12344445555
Q ss_pred HHHHHhccCcc-hhhhhhhccccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHH
Q 011416 120 RCLVGVGLGSG-HVFLSWFLEFVPP-SNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAF 194 (486)
Q Consensus 120 r~l~G~~~~~~-~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 194 (486)
..+.+++.+.. +...+.+.+..++ +++++.+++.++..++|..++|.+++.+.+..||+..|++.+++.++..+.
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 56666766666 5556666666665 889999999999999999999999999999999999999887776665443
No 200
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.33 E-value=4.5e-11 Score=117.22 Aligned_cols=161 Identities=15% Similarity=0.063 Sum_probs=110.2
Q ss_pred hhhhchhchhhhhcCCCcchhHH------------HHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc
Q 011416 42 MILSFVGPTVKSEWNLSSTEESL------------ITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~g~------------~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 109 (486)
.......|.+.++.|.+..+.+. ...+..++..++.+++++++||+|||++++.+..+.+++..+.++
T Consensus 305 y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 305 YGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred HccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 33444567777788876543221 233444566678889999999999999998888777776655554
Q ss_pred CC----CHHHHHHHHHHHHh-ccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC----------
Q 011416 110 SP----NYITLITLRCLVGV-GLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR---------- 174 (486)
Q Consensus 110 a~----~~~~l~~~r~l~G~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~---------- 174 (486)
.. +...+...-+...+ +.+..+....+..|.+|.+.|+++.|+.+....+|.++++.+.+.+.+.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 464 (502)
T TIGR00887 385 AYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTG 464 (502)
T ss_pred HHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccc
Confidence 31 11112211122222 2222345556778999999999999999999999999999999988773
Q ss_pred CCcHHHHHHhHHHHHHHHHHhhccCCCc
Q 011416 175 LDWRWLLGLSSIPSFILLAFLGFQPESP 202 (486)
Q Consensus 175 ~~w~~~f~~~~~~~~~~~~~~~~~~e~~ 202 (486)
.++...|++.+++.++..+..+++||+.
T Consensus 465 ~~~~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 465 IWMGHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHheEeccCC
Confidence 3556778887777776655667778864
No 201
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=1.3e-10 Score=111.10 Aligned_cols=161 Identities=19% Similarity=0.191 Sum_probs=137.2
Q ss_pred HhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcch--HHHHHHHHHHHHhhhhhhc--------C
Q 011416 41 IMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRR--MGFLGEALVTAGAGLLSSF--------S 110 (486)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r--~~~~~~~~~~~~~~~~~~~--------a 110 (486)
..........-.+++|++..+...+.-+..+...++++++|++.||+|.| +++..+++++.+..+...+ .
T Consensus 298 ~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~ 377 (477)
T PF11700_consen 298 NTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGL 377 (477)
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCc
Confidence 34444555556679999999999999999999999999999999999999 8988888888665555444 6
Q ss_pred CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cHHHHHHhHHHH
Q 011416 111 PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD-WRWLLGLSSIPS 188 (486)
Q Consensus 111 ~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~-w~~~f~~~~~~~ 188 (486)
++-+.+.+.-++.|+..|.. +...++.+|..|+++.+..+|++....-....+||++-+.+.+..| -|..+....++.
T Consensus 378 ~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf 457 (477)
T PF11700_consen 378 KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLF 457 (477)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 78889999999999999998 7788999999999999999999999999999999999999988775 888888877777
Q ss_pred HHHHHHhhccCCC
Q 011416 189 FILLAFLGFQPES 201 (486)
Q Consensus 189 ~~~~~~~~~~~e~ 201 (486)
++.+++..+++.+
T Consensus 458 ~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 458 LIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHHhhccch
Confidence 7777666666543
No 202
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.29 E-value=1.7e-11 Score=108.08 Aligned_cols=128 Identities=13% Similarity=0.023 Sum_probs=107.1
Q ss_pred CCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhH
Q 011416 324 HHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVS 403 (486)
Q Consensus 324 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (486)
.+.+...+|...+.+++..++.++..|.++||+|||.++.++.+..++...+.+...+...++..=++.|++ -+...+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~-kgnl~v~ 141 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIF-KGNLSVI 141 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cCchHHH
Confidence 345667889999999999999999999999999999999999999999888888777773333334555555 5566889
Q ss_pred hhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH---hhccchHHH
Q 011416 404 LIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA---NCHQMTAVV 452 (486)
Q Consensus 404 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~---~~g~~~~~~ 452 (486)
.++++|++++++|+.+++..+...++|-++||.++|++.+ ..|.+..++
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~al 193 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFAL 193 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHH
Confidence 9999999999999999999999999999999999999987 455443333
No 203
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.28 E-value=1.1e-08 Score=93.61 Aligned_cols=324 Identities=16% Similarity=0.113 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhcccc
Q 011416 63 SLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFV 141 (486)
Q Consensus 63 g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~ 141 (486)
+.+.-+-.+...+..+.+.+..+|+..+.=.....++..++.++.++++|.+.=+++-++.++++|.. .....+ +..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhc
Confidence 44555666777778888889999988766667777788899999999999999899999999999988 544454 4455
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cHHHHHHhHHHHHHHHHHhh-ccCCCchhhhhcCChHHHHHHH
Q 011416 142 PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD--WRWLLGLSSIPSFILLAFLG-FQPESPRYLCLKGRTAEAHRAL 218 (486)
Q Consensus 142 ~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~--w~~~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~ 218 (486)
++ ...+-+.++.+.+.++|+..-..+.+ .+ -|..+.+...+.++..+.++ .+|+++... ..++.++.
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~-~~~~~~~~---- 210 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNR-PYQESESE---- 210 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccC-CCcccCCC----
Confidence 53 35678888888888888877666655 55 47777777666655544433 444332110 00000000
Q ss_pred HHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhc--hhhHHHHHHHHHHHHHHH
Q 011416 219 EKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFS--SKLARTTILLWLLLFGNS 296 (486)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~ 296 (486)
+ +.+++. ... +..+.+.+......+++-++ ++..+.++.+...+++..
T Consensus 211 -----------~----------~~~~~~--------~~~-~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY 260 (402)
T PF02487_consen 211 -----------D----------EAEDDL--------LES-ETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEY 260 (402)
T ss_pred -----------C----------cccccc--------ccc-ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000 000 00000000000011111111 111112222333333333
Q ss_pred HHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 011416 297 FAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPL 376 (486)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 376 (486)
+...++. +.+. ...........-.++...+.++.++++--...+ |+.+.+++.+...+-.+.++.-
T Consensus 261 ~InqGv~---~tl~---------fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~ 326 (402)
T PF02487_consen 261 FINQGVA---PTLL---------FPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQ 326 (402)
T ss_pred HHHhchH---HHhc---------CCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHH
Confidence 3322222 2221 001111222333455566666666655432221 3333333322222222222222
Q ss_pred h---hhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHH
Q 011416 377 V---TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVAL 441 (486)
Q Consensus 377 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l 441 (486)
. +.++.|...+.++.-|+..|..+...+..+.|..++++|.-++|.....-.+|-.++..+.-++
T Consensus 327 s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 327 SWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 2 2456777777888888888888888888889999999999999999999888888887775443
No 204
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.28 E-value=7.5e-09 Score=96.42 Aligned_cols=310 Identities=17% Similarity=0.083 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcchhhh-hhhccccCCC
Q 011416 66 TTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSGHVFL-SWFLEFVPPS 144 (486)
Q Consensus 66 ~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~-~~i~~~~~~~ 144 (486)
.++-+..+.++.++.+.+.|+.|+|+.+.++......-.+.+-+ +|-+.+++.-.+.|+|.+...... .+++|...++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77788888999999999999999999999999999887776666 456668889999999999885554 7999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CcH-H----------HHHHhHHH---HHHHHHHhhccCCCc
Q 011416 145 NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL--------DWR-W----------LLGLSSIP---SFILLAFLGFQPESP 202 (486)
Q Consensus 145 ~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~--------~w~-~----------~f~~~~~~---~~~~~~~~~~~~e~~ 202 (486)
.+.+..++..+....+.++|......+.... +-+ . ...+.+++ ..+..+...+.|.+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 9999999999999998888876554432111 111 1 11111111 111112222222211
Q ss_pred hhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhH
Q 011416 203 RYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLA 282 (486)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 282 (486)
.. ..++..+ ......++..++....
T Consensus 215 ~~-~~~~~~~------------------------------------------------------~~~~~~l~~~~~l~~~ 239 (461)
T KOG3098|consen 215 VV-NCKSSSE------------------------------------------------------TSFSELLKLTFKLLKT 239 (461)
T ss_pred hh-hhhhhcc------------------------------------------------------ccHHHHHHHHHHHhcC
Confidence 10 0000000 0000012222222111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH---hchh
Q 011416 283 RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT---AGRK 359 (486)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr---~g~~ 359 (486)
++++.+....+...+ ...+|...+..... .-.....-+....++.....+++.+++....+.+.+| +|++
T Consensus 240 ~~ml~L~~~f~~tG~---~~Sf~~~iypt~i~----ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~ 312 (461)
T KOG3098|consen 240 PKMLLLFPFFFYTGL---ETSFWISIYPTCIS----FTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK 312 (461)
T ss_pred HhHHHHHHHHHHHHH---HHHHHHhccchhhh----hhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC
Confidence 222222222221111 11112221111100 0001112233445666677788888888888888876 5778
Q ss_pred HHHHHHHHHHHHHHHHHhhh------------------chhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhH
Q 011416 360 LSITIMFTLSCLFLLPLVTY------------------QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAG 421 (486)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 421 (486)
+.+.++..+..+..++.... ++.....+..++.|++-....+..+.++...+| +.|..+.+
T Consensus 313 ~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fs 391 (461)
T KOG3098|consen 313 PTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFS 391 (461)
T ss_pred cchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHH
Confidence 88887777777666665431 123466677788889988899999999999994 66888888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011416 422 AANAMGRIGGMVCPLVAV 439 (486)
Q Consensus 422 ~~~~~~~~g~~~~~~i~g 439 (486)
+...-..++..++-+...
T Consensus 392 i~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 392 LFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHHHHhhhhh
Confidence 888888888777666654
No 205
>PRK10133 L-fucose transporter; Provisional
Probab=99.28 E-value=4.6e-10 Score=107.68 Aligned_cols=150 Identities=15% Similarity=0.025 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHH
Q 011416 282 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLS 361 (486)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~ 361 (486)
...+.....+++...+.........|.+. ++++.++.+.++......++..++.++.|++.||+|||++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-----------~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~ 93 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQ-----------QAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG 93 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 34455556666666666677777777654 4568999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh---hhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHH
Q 011416 362 ITIMFTLSCLFLLPLV---TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 438 (486)
Q Consensus 362 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~ 438 (486)
+..+..+.+++.+++. ..++.+.+.+..++.|++.+...+..+.++.+..|++++...+++.+....+|..++|.+.
T Consensus 94 l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 94 IITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998887653 3566777778888899999999999889888877777666678999999999999999987
Q ss_pred HHHH
Q 011416 439 VALV 442 (486)
Q Consensus 439 g~l~ 442 (486)
+.+.
T Consensus 174 ~~l~ 177 (438)
T PRK10133 174 QSLI 177 (438)
T ss_pred HHHH
Confidence 7654
No 206
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.27 E-value=4.7e-10 Score=107.91 Aligned_cols=129 Identities=20% Similarity=0.097 Sum_probs=101.8
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchh--------HHHHHHHHHHHHhhhhhhhhHh
Q 011416 333 IDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSN--------ILTTGLLFGARMCVMGAFTVSL 404 (486)
Q Consensus 333 ~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 404 (486)
.......++..++.++.|+++||+|||+.+..+.++.+++.+...+.++. ..+.+.-++.|++.++.++...
T Consensus 67 ~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~ 146 (432)
T PRK10406 67 GVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSA 146 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHH
Confidence 34445556666999999999999999999999999998888887764443 2455666788899999999999
Q ss_pred hhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH--------HhhccchHHHHHHHHHHHH
Q 011416 405 IYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV--------ANCHQMTAVVLLVVVIVTS 461 (486)
Q Consensus 405 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~--------~~~g~~~~~~~~~~~~~~~ 461 (486)
+++.|..|+++|+.+.++.......|..+++.+...+. +..||+..|++.++..++.
T Consensus 147 ~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 147 TYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 99999999999999999888777788787777655443 2468888888766655544
No 207
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=2.5e-10 Score=109.91 Aligned_cols=142 Identities=14% Similarity=0.122 Sum_probs=102.0
Q ss_pred HHhhHhhhhchhchhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhh-h---hhcCC
Q 011416 37 EAMEIMILSFVGPTVKS-EWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGL-L---SSFSP 111 (486)
Q Consensus 37 ~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~-~---~~~a~ 111 (486)
............|.+.+ .+|.+..+.++....+.++..++.+++|+++||+|||+++..+..+..+... . ....+
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33334445555677655 4899999999999999999999999999999999999988876544432221 1 11234
Q ss_pred CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCcH
Q 011416 112 NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSF-WTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 112 ~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
++..+.+..++.|++.+.. +....++.|.+|+++|+.+.++.... ..++..++|.+.+.+.+..|++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 5555555556666666655 44557888999999999999986544 4445778999999999888864
No 208
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.27 E-value=1.4e-10 Score=112.16 Aligned_cols=130 Identities=15% Similarity=0.178 Sum_probs=106.0
Q ss_pred hhchhhhh-cCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcC-CCHHHHHHHHHHHH
Q 011416 47 VGPTVKSE-WNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFS-PNYITLITLRCLVG 124 (486)
Q Consensus 47 ~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G 124 (486)
..+.+.++ ++ +..+.+++.+...++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|
T Consensus 244 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 322 (437)
T TIGR00792 244 VQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAG 322 (437)
T ss_pred hhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHH
Confidence 33444333 34 56677888888899999999999999999999999999998888887777665 46677778888899
Q ss_pred hccCcc-hhhhhhhccccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 125 VGLGSG-HVFLSWFLEFVP-------PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 125 ~~~~~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
++.+.. +...++++|..+ ++++|...|+.+....+|..+++.+.+.+.+..||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 323 FGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 998877 666677777754 56689999999999999999999999998877666
No 209
>TIGR00898 2A0119 cation transport protein.
Probab=99.25 E-value=6.7e-11 Score=116.51 Aligned_cols=147 Identities=12% Similarity=0.058 Sum_probs=124.9
Q ss_pred cccCCCC---CchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhh
Q 011416 321 MFSHHPQ---DANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVM 397 (486)
Q Consensus 321 ~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (486)
..+.+.+ +.+.++..+...++.+++.++.|+++||+|||+++.++.++..++.++..+.++.+.+.+..++.|++.+
T Consensus 116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~ 195 (505)
T TIGR00898 116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIG 195 (505)
T ss_pred EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhcc
Confidence 3556777 7888999999999999999999999999999999999999988888888888888888888899999999
Q ss_pred hhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 398 GAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
...+....++.|.+|+++|+.+.++......+|.+++|.+.+.+.+ |...+++.++..++..+..++ .+|
T Consensus 196 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~-~~e 265 (505)
T TIGR00898 196 GIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWF-VPE 265 (505)
T ss_pred chHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999988888999999988765544 677777777766666555543 344
No 210
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.25 E-value=2.4e-11 Score=109.81 Aligned_cols=147 Identities=14% Similarity=0.024 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhh----hhcchHHHHH-HHHH
Q 011416 25 FVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVAD----NYGRRMGFLG-EALV 99 (486)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~r~~~~~-~~~~ 99 (486)
+.++..+...+-..+.+..--.+.+++.+++|++....+.+--...+...+.+|+.|..+| ||||||.++. +.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 3344444444445555555566778888999999999999988899999999999999999 6798877665 5666
Q ss_pred HHHhhhhhhcCCCHHH-----------------HHHHHHHHHhccCcc-hhhhhhhccccCCCchhH-HHHHHHHHHHHH
Q 011416 100 TAGAGLLSSFSPNYIT-----------------LITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGM-WMVIFSSFWTIG 160 (486)
Q Consensus 100 ~~~~~~~~~~a~~~~~-----------------l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G 160 (486)
.+++.++..++.++.. ++++-.+.-++.-.. .++-+++.|...++++.+ +.+.+..+.++|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 6777778877754332 333344444455445 677789999887776666 999999999999
Q ss_pred HHHHHHHHHHH
Q 011416 161 SVSEAIGAWII 171 (486)
Q Consensus 161 ~~i~~~l~~~l 171 (486)
..+|..++.++
T Consensus 192 nvLGY~~g~y~ 202 (498)
T KOG0637|consen 192 NVLGYALGSYL 202 (498)
T ss_pred ceeeeeccccc
Confidence 99999888743
No 211
>PTZ00207 hypothetical protein; Provisional
Probab=99.25 E-value=5.8e-10 Score=108.30 Aligned_cols=162 Identities=12% Similarity=0.057 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHH
Q 011416 295 NSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLL 374 (486)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 374 (486)
.....|....+.+.+. +++|.+..+.+......... ....++.|++.||+|+|+++.++.++..++.+
T Consensus 39 ~~g~~y~fsv~s~~L~-----------~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~l 106 (591)
T PTZ00207 39 CTSFMYAFNLISGAMQ-----------ARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTL 106 (591)
T ss_pred HHHHHHHHHHHHHHHH-----------HHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3444556666666554 45678888888777653333 34566789999999999999999999999998
Q ss_pred HHhhh------chhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011416 375 PLVTY------QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQM 448 (486)
Q Consensus 375 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~ 448 (486)
+..+. .+.+.+.+..++.|++.+...+.....+.+.+| ++||.+.|+......+|+.+.+.+...+.+ .++.
T Consensus 107 l~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~ 184 (591)
T PTZ00207 107 LFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTS 184 (591)
T ss_pred HHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHH
Confidence 88774 456667777778888887777777788888887 679999999999999999865555544443 2455
Q ss_pred hHHHHHHHHHHHHHHHHhcccc
Q 011416 449 TAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
..+++.+++.++..++.+.+.+
T Consensus 185 ~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 185 AYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhhee
Confidence 6677777777666666555543
No 212
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.24 E-value=2.7e-10 Score=108.58 Aligned_cols=146 Identities=14% Similarity=0.150 Sum_probs=105.0
Q ss_pred hchhhhhcCCCcchhHHHHHHHH-HHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhh---hcC-CCHHHHHHHHHH
Q 011416 48 GPTVKSEWNLSSTEESLITTSVF-AGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLS---SFS-PNYITLITLRCL 122 (486)
Q Consensus 48 ~~~~~~~~~~s~~~~g~~~s~~~-~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~a-~~~~~l~~~r~l 122 (486)
.+.+.+++|++..+.+++.+... .+..++.+++|++.||+|+|+.+..+..+..+..+.. ++. ++.+.+.+.-++
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34567789999999999986654 5689999999999999999998887776666554333 344 466666655544
Q ss_pred ----HHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhc
Q 011416 123 ----VGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGF 197 (486)
Q Consensus 123 ----~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 197 (486)
.|++.+.. .....++.+..|.++ .++.+...++|..+++.+++.+.+..||+..|.+.++++++.+++...
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 44445444 344456666666554 455566667788777778999999999999999988888776555433
No 213
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.24 E-value=1.3e-07 Score=88.54 Aligned_cols=368 Identities=13% Similarity=-0.029 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHhhHhhhhchhchhhhhcCC-CcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHh---
Q 011416 28 AYAGLGWVAEAMEIMILSFVGPTVKSEWNL-SSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGA--- 103 (486)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~--- 103 (486)
..+...+++...+.-++.+..|.+..+..- +---.+...-.-.+...+.++..|.+.||..|.++...+.+..-++
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~ 84 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAA 84 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHH
Confidence 345667777777777888888877776643 3333455555566777888999999999999998877765443322
Q ss_pred -hhhhh--cC--C----CHHHHH---HHHHHHHhccCcchhhhhhh--cccc------CCCchhHHHHHHHHHHHHHHHH
Q 011416 104 -GLLSS--FS--P----NYITLI---TLRCLVGVGLGSGHVFLSWF--LEFV------PPSNRGMWMVIFSSFWTIGSVS 163 (486)
Q Consensus 104 -~~~~~--~a--~----~~~~l~---~~r~l~G~~~~~~~~~~~~i--~~~~------~~~~r~~~~~~~~~~~~~G~~i 163 (486)
+.+.. +. + +-+... +.-.+.|.-.-....+.... .||. +++.+.+..+...-.-.+..++
T Consensus 85 s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckll 164 (432)
T PF06963_consen 85 SCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLL 164 (432)
T ss_pred HHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHH
Confidence 22211 11 1 112222 22222222222222222211 2453 4556677778888888889999
Q ss_pred HHHHHHHHhcCCCcHHHHHHhHHHHHHHHHH-hhcc----CCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhcc
Q 011416 164 EAIGAWIIMPRLDWRWLLGLSSIPSFILLAF-LGFQ----PESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARR 238 (486)
Q Consensus 164 ~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~-~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (486)
+|++.|.+.+..+.+....+.++..++.+++ ++++ ...|. +..+++.++.+...
T Consensus 165 aPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~-L~~~~~~~~~~~~~-------------------- 223 (432)
T PF06963_consen 165 APLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPA-LAVKKRSSESESSS-------------------- 223 (432)
T ss_pred HHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-hcCCCCCccccccc--------------------
Confidence 9999999999889888877777776665433 2222 12221 11111111000000
Q ss_pred ccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 011416 239 STLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRS 318 (486)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (486)
+.+ +.+.+.+.....+ .....-......|+..++.+....-+...++++........+..|
T Consensus 224 ~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~TVLsf~~lmt~y------------- 284 (432)
T PF06963_consen 224 DEE--SSSESSSDPSILK----RLWNPLRTIIRGWRTYFRQPVFLASFALALLYFTVLSFGGLMTAY------------- 284 (432)
T ss_pred ccc--ccccccchhhHHH----HHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHHHhcCcHHHHHH-------------
Confidence 000 0000000000000 000000111224555666555555444444444311111111111
Q ss_pred CccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh----hhchh------HHHHHH
Q 011416 319 PLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV----TYQSN------ILTTGL 388 (486)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~ 388 (486)
....|+++...+..-....+.++.+.++..++.+|+|..+.-.++......++.+.. ...++ ..+...
T Consensus 285 --l~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~g 362 (432)
T PF06963_consen 285 --LKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGG 362 (432)
T ss_pred --HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHH
Confidence 123489999999999999999999999999999999988777666665443333222 22211 122222
Q ss_pred HHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHH
Q 011416 389 LFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLV 437 (486)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i 437 (486)
..+.-++.-+.=-...-+..|..|+++||+..|+-+..+++...+.-.+
T Consensus 363 i~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 363 IALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 2333333344445677788999999999999999999998877665544
No 214
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.23 E-value=3.7e-10 Score=102.80 Aligned_cols=158 Identities=12% Similarity=0.055 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhchhhh---hcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHH
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPTVKS---EWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAG 102 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~ 102 (486)
.+.+..+..++............+.+.+ .+|++..+.+...+.+..+..++.+..+++.||+|+|+.+.++..+..+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3334445555544344444444455443 3699999999999999999999999999999999999999888888888
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 011416 103 AGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLL 181 (486)
Q Consensus 103 ~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f 181 (486)
+.++....++...+ ..-++.|++.+.. |...+...+..++ +.+.+.++. ....+|.++.|++.|.+.+..|.+..|
T Consensus 221 ~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~ 297 (310)
T TIGR01272 221 LSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAF 297 (310)
T ss_pred HHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHH
Confidence 77666665554433 3555788988888 7777777777764 456667775 566789999999999999999999988
Q ss_pred HHhHH
Q 011416 182 GLSSI 186 (486)
Q Consensus 182 ~~~~~ 186 (486)
++..+
T Consensus 298 ~v~~~ 302 (310)
T TIGR01272 298 ALPVP 302 (310)
T ss_pred HHHHH
Confidence 75433
No 215
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.22 E-value=1.3e-09 Score=101.17 Aligned_cols=146 Identities=10% Similarity=0.024 Sum_probs=125.0
Q ss_pred ccCCCCCch-hHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhh
Q 011416 322 FSHHPQDAN-LYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAF 400 (486)
Q Consensus 322 ~~~~~~~~~-~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (486)
+++|++..+ .+.....+..+..+..+.+|+++||+|.|+++.++.+...+..++..+.++...+.+.-++.|++.+...
T Consensus 54 ~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~ 133 (511)
T TIGR00806 54 TVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI 133 (511)
T ss_pred HHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999 9999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHH---HHHHHHHHHHHHHHhccc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAV---VLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~---~~~~~~~~~~~~~~~~~~ 469 (486)
....++.+.+|+++|+++.|+.+....+|.++++.+.++ ....||.... .+..+...++.++.+++.
T Consensus 134 -A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 134 -AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred -HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999 5556765433 233344444455555544
No 216
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.22 E-value=2.4e-10 Score=105.17 Aligned_cols=165 Identities=7% Similarity=-0.050 Sum_probs=132.5
Q ss_pred HHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHH
Q 011416 36 AEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYIT 115 (486)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~ 115 (486)
-..+|.. .+.....+-++-+.+....|.+.+...+.-++...+..++.+|+|.|+.++++..++++=.+++++++|.+.
T Consensus 236 Y~vfdqq-f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~ 314 (412)
T PF01306_consen 236 YDVFDQQ-FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWV 314 (412)
T ss_dssp HHHHHHH-HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHH
T ss_pred HHHHHHH-HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHH
Confidence 3444444 333333343444445667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHH
Q 011416 116 LITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIF-SSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLA 193 (486)
Q Consensus 116 l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~ 193 (486)
+.+.+.+.|+-.+.. .....|+++.+|+|..++...+. +.+.++|..+.+.++|.+.|+.|.+..|++.+.+.++..+
T Consensus 315 i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~l 394 (412)
T PF01306_consen 315 ISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTL 394 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHH
Confidence 999999999999988 77779999999998888888774 7888999999999999999999999999999888777655
Q ss_pred H-hhccCCC
Q 011416 194 F-LGFQPES 201 (486)
Q Consensus 194 ~-~~~~~e~ 201 (486)
+ .+.++++
T Consensus 395 i~~f~l~~~ 403 (412)
T PF01306_consen 395 ISAFTLKKD 403 (412)
T ss_dssp HHHHHS--S
T ss_pred HheeeecCC
Confidence 4 4445544
No 217
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.21 E-value=1.8e-10 Score=114.87 Aligned_cols=150 Identities=9% Similarity=0.017 Sum_probs=123.9
Q ss_pred ccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-------------------
Q 011416 320 LMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ------------------- 380 (486)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~------------------- 380 (486)
+.++++.+..+.+++.+...++..++.++.+++.||.+||+++.++.++.+++.++..+.+
T Consensus 59 iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 59 IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 3466789999999999999999999999999999999999999999999999888776531
Q ss_pred --------------------------------hhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHH
Q 011416 381 --------------------------------SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR 428 (486)
Q Consensus 381 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 428 (486)
....+++.-++.|++.+..++...+++.|.+|+++|+.+.|+.+....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 123445677888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh----------------------ccchHHHHHHHHHHHHHHHHhccc
Q 011416 429 IGGMVCPLVAVALVANC----------------------HQMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 429 ~g~~~~~~i~g~l~~~~----------------------g~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
+|..+++.+.+.+.+.. .|+..|++.+++.++.++..+.+.
T Consensus 219 iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred hhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999888643 145567777766666655554443
No 218
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=7.6e-11 Score=113.35 Aligned_cols=174 Identities=17% Similarity=0.186 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhc--chHHHHHHHHHHHHh
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYG--RRMGFLGEALVTAGA 103 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G--~r~~~~~~~~~~~~~ 103 (486)
.+....+...+..+...+....+|.+.++.+.+..+.+.+.++..+...++.+..|+++|+.. ++.+..++++..+++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 556666777777888888888999999999999999999999999999999999999999988 566777888888999
Q ss_pred hhhhhcCCCHHHHHHHHHHHHhccCcchhhh-hhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cHHHH
Q 011416 104 GLLSSFSPNYITLITLRCLVGVGLGSGHVFL-SWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD-WRWLL 181 (486)
Q Consensus 104 ~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~-w~~~f 181 (486)
.+.+.++++++.+.....+.|++.|...... ..+.|..+.++-..+.|+.....+++.++||++++.+.+..+ |...|
T Consensus 379 ~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f 458 (509)
T KOG2504|consen 379 RLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAF 458 (509)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeeh
Confidence 9999999999999999999999999885554 577799999999999999999999999999999999888777 99999
Q ss_pred HHhHHHHHHHHHHhhccC
Q 011416 182 GLSSIPSFILLAFLGFQP 199 (486)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~ 199 (486)
+..++..++..+.++..+
T Consensus 459 ~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 459 YFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhcChHHHHHHHHHHHhH
Confidence 999998888777666665
No 219
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.20 E-value=9.2e-10 Score=92.28 Aligned_cols=352 Identities=14% Similarity=0.026 Sum_probs=196.0
Q ss_pred HhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHH
Q 011416 41 IMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLR 120 (486)
Q Consensus 41 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r 120 (486)
.-.-+|.+-.+-+.++....++|.+.-+.+-..++...+.|.++||-|||+.-+.-++...+++ +.-.+++|-.++++|
T Consensus 53 DWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR 131 (454)
T KOG4332|consen 53 DWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGR 131 (454)
T ss_pred hhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehh
Confidence 3345677777888899999999999888888889999999999999999996544444444433 345678899999999
Q ss_pred HHHHhccCcc-hhhhh-hhccccCCCc-----hhHHHHHH-HHHHHHHHHHHHHHHHHHhcCC--CcHHHHHHhHHHHHH
Q 011416 121 CLVGVGLGSG-HVFLS-WFLEFVPPSN-----RGMWMVIF-SSFWTIGSVSEAIGAWIIMPRL--DWRWLLGLSSIPSFI 190 (486)
Q Consensus 121 ~l~G~~~~~~-~~~~~-~i~~~~~~~~-----r~~~~~~~-~~~~~~G~~i~~~l~~~l~~~~--~w~~~f~~~~~~~~~ 190 (486)
.+-|+..+.. ..--+ ++.|..+++. ....++-. ..+.++=.+++.+.+-.+.+.+ |--.+|-..+.+..+
T Consensus 132 ~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLai 211 (454)
T KOG4332|consen 132 VLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAI 211 (454)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHH
Confidence 9999999887 55545 4557653321 11111111 1233344455555565666544 444555444433333
Q ss_pred H-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCc
Q 011416 191 L-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSG 269 (486)
Q Consensus 191 ~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (486)
. .+..- .|...-+++.+.++...+.+.
T Consensus 212 gmAvil~------~W~ENygdps~~kdlltqf~g---------------------------------------------- 239 (454)
T KOG4332|consen 212 GMAVILS------SWSENYGDPSENKDLLTQFKG---------------------------------------------- 239 (454)
T ss_pred HHHHHHh------hhhhccCChhhhHHHHHHhhH----------------------------------------------
Confidence 2 22221 133333444444444433322
Q ss_pred hhhhHhhhchhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHH
Q 011416 270 LSLFLMLFSSKLARTTILLWLL-LFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLL 348 (486)
Q Consensus 270 ~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 348 (486)
..+.+.+++ ++.++... ...-...+..+..|.|.+.. ++ ...--|..+..+.+..++|+-+
T Consensus 240 --aa~aiaSD~---ki~LLG~iqsLFE~smytFVFLWTPaLsp----------n~---e~iPhGfiFatFMlASmLGSSl 301 (454)
T KOG4332|consen 240 --AARAIASDE---KIALLGAIQSLFEGSMYTFVFLWTPALSP----------ND---EEIPHGFIFATFMLASMLGSSL 301 (454)
T ss_pred --hHHHHhcch---HHHHHHHHHHHHhhhhheeeeeecccCCC----------Cc---ccCCchhHHHHHHHHHHHhhHH
Confidence 111122221 12222222 22223333333345553320 11 1122356666777777888777
Q ss_pred HHHHHHHhch--hHHHHHHHHHHHHHHHHHhh-------hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhH
Q 011416 349 AAILVDTAGR--KLSITIMFTLSCLFLLPLVT-------YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTG 419 (486)
Q Consensus 349 ~g~l~dr~g~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (486)
..++..|-.. ...+.+.+.+..+.+.+... ..++....+..+++-.+.+..+|..+-+-.+..|++.|++.
T Consensus 302 a~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearsti 381 (454)
T KOG4332|consen 302 ASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTI 381 (454)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhh
Confidence 7777665433 23445555555444433322 11233445666667788899999999999999999999887
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh--hccchHHHHHHHHHHHHHHHH
Q 011416 420 AGAANAMGRIGGMVCPLVAVALVAN--CHQMTAVVLLVVVIVTSILSV 465 (486)
Q Consensus 420 ~g~~~~~~~~g~~~~~~i~g~l~~~--~g~~~~~~~~~~~~~~~~~~~ 465 (486)
+-....--++-..++-.. .=.+. .+....|-++.+...++.+..
T Consensus 382 mNfFRvPLnifvClvLyn--lh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 382 MNFFRVPLNIFVCLVLYN--LHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred hhheechhhHhhhhhhee--cccccCccccchhhhhhHHHHHHHHHHH
Confidence 665544333322222111 00111 233456666666666654443
No 220
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.20 E-value=2.7e-10 Score=104.95 Aligned_cols=186 Identities=15% Similarity=0.042 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH-hchhHH
Q 011416 283 RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKLS 361 (486)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~ 361 (486)
|.++.++..-+.--++||++-..+..+..... .+..|+++.++.-....+....-+..+++|+++|| +|+|+.
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~------~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQL------GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhc------cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 34555666666777888887766655542211 12245888888888888777777888999999999 599999
Q ss_pred HHHHHHHHHHHHHHHhhh--chhHHHHHHHHHHHHhhhhhhhhHhhhccccccccc--hhhHhHHHHHHHHHHHHHHHHH
Q 011416 362 ITIMFTLSCLFLLPLVTY--QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSV--RSTGAGAANAMGRIGGMVCPLV 437 (486)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~~~~i 437 (486)
+..+.+++.++.+++... .....+.+.+.+..++.+..=+...++..|.+|+++ |..++++..+..++|+.++|.+
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 999999999999999886 366777888888889999999999999999987643 6778888889999999999999
Q ss_pred HHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccC
Q 011416 438 AVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKG 474 (486)
Q Consensus 438 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (486)
.+++.++.||...|...++-+.++.+..++..+..+.
T Consensus 175 ~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 175 TGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 9999999999999999999888888888777654443
No 221
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.19 E-value=1.6e-09 Score=101.80 Aligned_cols=180 Identities=16% Similarity=0.117 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH
Q 011416 22 YQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTA 101 (486)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~ 101 (486)
.|+.....+.+...-..-+...+......+-++-|++..+.-+..........+..+++..+.||+|||+.++.+..+..
T Consensus 267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMA 346 (485)
T ss_pred hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 33433333333333333444555566677888899999999999999999999999999999999999999999999998
Q ss_pred HhhhhhhcCC---CHH------HHHHHHHHH--HhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 102 GAGLLSSFSP---NYI------TLITLRCLV--GVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWI 170 (486)
Q Consensus 102 ~~~~~~~~a~---~~~------~l~~~r~l~--G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 170 (486)
+..+++..+. +.. ..+++.++. .++.|..|...-+.+|.+|++.|+.++++.....-+...+-...-..
T Consensus 347 ~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~ 426 (485)
T KOG0569|consen 347 VALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPP 426 (485)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776542 111 123344443 34445556666788899999999999999999988888887777777
Q ss_pred HhcCCCcHHHHHHhHHHHHHH-HHHhhccCCCc
Q 011416 171 IMPRLDWRWLLGLSSIPSFIL-LAFLGFQPESP 202 (486)
Q Consensus 171 l~~~~~w~~~f~~~~~~~~~~-~~~~~~~~e~~ 202 (486)
+.+..|- +.|++..+++++. +..++.+||+.
T Consensus 427 l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 427 LQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 7777776 6777777777665 56688899985
No 222
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.18 E-value=5.3e-10 Score=104.84 Aligned_cols=167 Identities=11% Similarity=0.112 Sum_probs=129.6
Q ss_pred HHHHHhhHhhhhchhchhhhhcC-CCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcC-C
Q 011416 34 WVAEAMEIMILSFVGPTVKSEWN-LSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFS-P 111 (486)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a-~ 111 (486)
.++.......+....+.+.++.| .+....|.+.++..++-.+.-...+++..|+|.|+++.++.+..++=..+++.. +
T Consensus 216 ~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~ 295 (400)
T PF03825_consen 216 AFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD 295 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34445555555555666777777 777888888888889999999999999999999999999999999988888887 5
Q ss_pred CHHHHHH----HHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHH-HHHHHHHHHHHHHHHhcCCC------cHH
Q 011416 112 NYITLIT----LRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSF-WTIGSVSEAIGAWIIMPRLD------WRW 179 (486)
Q Consensus 112 ~~~~l~~----~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~i~~~l~~~l~~~~~------w~~ 179 (486)
+.+...+ ...++|+..+.. .....++.+..|++.|+++.+++.+. .++|..+|..++|.+.+++| |..
T Consensus 296 ~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~ 375 (400)
T PF03825_consen 296 PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSA 375 (400)
T ss_pred CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHH
Confidence 5554333 345699999988 77788999999999999999998764 68999999999999998776 444
Q ss_pred HHHHhHHHHHHHHH-HhhccCC
Q 011416 180 LLGLSSIPSFILLA-FLGFQPE 200 (486)
Q Consensus 180 ~f~~~~~~~~~~~~-~~~~~~e 200 (486)
.+.+.+++.++..+ .+++++|
T Consensus 376 ~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 376 VFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHHhhccC
Confidence 55555555555433 3444444
No 223
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.17 E-value=6.5e-10 Score=104.17 Aligned_cols=137 Identities=11% Similarity=-0.080 Sum_probs=110.3
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
+++|.+..+.++..+...++..++.++.|++.||+|||+.+.++.++.+++.+.. ..++.+...+..++.+++.+...+
T Consensus 28 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~ 106 (355)
T TIGR00896 28 SALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINV 106 (355)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhc
Confidence 4568999999999999999999999999999999999999998887777766655 455566666666777777777677
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc--cchHHHHHHHHHHH
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH--QMTAVVLLVVVIVT 460 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g--~~~~~~~~~~~~~~ 460 (486)
.......|.+| ++|+++.++.+....+|..+++.+.+.+.+..+ |...+...++..++
T Consensus 107 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 107 LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 77777788876 579999999999999999999999998887653 55566555544433
No 224
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.17 E-value=8e-10 Score=106.65 Aligned_cols=142 Identities=15% Similarity=0.056 Sum_probs=114.1
Q ss_pred CCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHh
Q 011416 325 HPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSL 404 (486)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (486)
|.+ .+..+......+...++.++.|+++|.+|||..++.+.++..++.++....++....+....+.|++.+.. ....
T Consensus 75 G~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~-~~~~ 152 (599)
T PF06609_consen 75 GGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQ-ELAA 152 (599)
T ss_pred CCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHH-HHHH
Confidence 344 45567777888999999999999999999999999999999999999999888888888888888885544 4556
Q ss_pred hhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcc
Q 011416 405 IYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 405 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
..++|..|.+.|..+.++.....-....++|.+...+..+.+|++.+++...+..++++..+++
T Consensus 153 ~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 153 LAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 6689999999998888777665555555777777766667789999998888777766554444
No 225
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.16 E-value=3e-09 Score=101.14 Aligned_cols=152 Identities=10% Similarity=-0.027 Sum_probs=113.4
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHH----HhchhHHHHHH-HHHHHHHHHHHhhhchh--------------
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVD----TAGRKLSITIM-FTLSCLFLLPLVTYQSN-------------- 382 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d----r~g~~~~~~~~-~~~~~~~~~~~~~~~~~-------------- 382 (486)
+..|.+....+.......+.+++..++.|+++| |+|||+..+.. .....+++.++.+..+.
T Consensus 32 ~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~ 111 (477)
T TIGR01301 32 QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKP 111 (477)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchh
Confidence 456789999999999999999999999999999 59999988764 55555565665553321
Q ss_pred ---HHHHHHHHHHHHhhhhhhhhHhhhccccccccch--hhHhHHHHHHHHHHHHHHHHHHHHH--HHhh----------
Q 011416 383 ---ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVR--STGAGAANAMGRIGGMVCPLVAVAL--VANC---------- 445 (486)
Q Consensus 383 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~g~~~~~~i~g~l--~~~~---------- 445 (486)
+...+...+..++.....+...+++.|..|+++| +.++++.+...++|+.+++.+.+.. .+..
T Consensus 112 ~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~ 191 (477)
T TIGR01301 112 RAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGV 191 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccc
Confidence 1223333344556677778889999999998865 6799999999999999999998864 2222
Q ss_pred ---ccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 446 ---HQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 446 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
+....|.+.+++.+++..+..+..+|..
T Consensus 192 ~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 192 SCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 3455677777777777777777776654
No 226
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.15 E-value=3e-10 Score=96.03 Aligned_cols=171 Identities=16% Similarity=0.137 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHH-HHHHH
Q 011416 24 CFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEA-LVTAG 102 (486)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~-~~~~~ 102 (486)
.+++.+++..+....+....+++ ...++++|+|+.+.+.+.+....-.++.+++.|.++||+|++.+.+.+. +...+
T Consensus 266 fw~~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~ 343 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLL 343 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHH
Confidence 34555556655555554444443 3478999999999999999999999999999999999999997766654 44444
Q ss_pred hhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---cH
Q 011416 103 AGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD---WR 178 (486)
Q Consensus 103 ~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~---w~ 178 (486)
+-....+ +++.=.++..+.|++.... ...-+.++...|+++.|++.|..++..++|..+.|++++.+.++-| |-
T Consensus 344 ~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~l 421 (459)
T KOG4686|consen 344 GHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNL 421 (459)
T ss_pred HhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhH
Confidence 4444444 3344456777888887766 3455788889999999999999999999999999999999987654 55
Q ss_pred HHHHHh-HHHHHHHHHHhhcc
Q 011416 179 WLLGLS-SIPSFILLAFLGFQ 198 (486)
Q Consensus 179 ~~f~~~-~~~~~~~~~~~~~~ 198 (486)
-+|.+. +.+++....+.+.+
T Consensus 422 e~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 422 EAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhe
Confidence 455443 33444433333333
No 227
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.15 E-value=5.7e-10 Score=104.62 Aligned_cols=149 Identities=19% Similarity=0.118 Sum_probs=111.2
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHh-----chhHH-HHHHHHHHHHHHHHHhhh---chhHHHHHHHHHH
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA-----GRKLS-ITIMFTLSCLFLLPLVTY---QSNILTTGLLFGA 392 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~-----g~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 392 (486)
++.|.+..+.+..... .+...+ .++.|+++||+ |||+. +..+.++.++....+.+. .+.+......++.
T Consensus 16 ~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~ 93 (356)
T TIGR00901 16 RSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLI 93 (356)
T ss_pred HHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHH
Confidence 3457888888888644 444444 88999999998 78886 456666666665555543 2333444444556
Q ss_pred HHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc--------cchHHHHHHHHHHHHHHH
Q 011416 393 RMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH--------QMTAVVLLVVVIVTSILS 464 (486)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g--------~~~~~~~~~~~~~~~~~~ 464 (486)
+.+.....+...+++.|.+|+++|+.+.|+......+|..+++.+.+.+.+..+ |...|++.+++.++..+.
T Consensus 94 ~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~ 173 (356)
T TIGR00901 94 AFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLV 173 (356)
T ss_pred HHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence 666666778889999999999999999999999999999999999999998888 888888888777766655
Q ss_pred Hhcccccc
Q 011416 465 VMLIPFET 472 (486)
Q Consensus 465 ~~~~~~~~ 472 (486)
.++..+|+
T Consensus 174 ~~~~~~e~ 181 (356)
T TIGR00901 174 TLFLAKEP 181 (356)
T ss_pred HHHhccCC
Confidence 55444554
No 228
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.14 E-value=9.4e-10 Score=99.18 Aligned_cols=160 Identities=21% Similarity=0.173 Sum_probs=135.1
Q ss_pred hhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHH
Q 011416 42 MILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRC 121 (486)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 121 (486)
..+......-..++|++..+...+.-...+..+++++++|+|.||+|.|+++..+.++..+.++...+...-..+.+.-.
T Consensus 270 til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gl 349 (438)
T COG2270 270 TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGL 349 (438)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 33333334445599999999999999999999999999999999999999999999999998888877777777778889
Q ss_pred HHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHhHHHHHHHHHHhhccC
Q 011416 122 LVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-DWRWLLGLSSIPSFILLAFLGFQP 199 (486)
Q Consensus 122 l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~ 199 (486)
+.|...|.. ..+.++..+..|+++-++.+|++......++.+||.+-+.+.+.. +-|..+....++..+.++....+|
T Consensus 350 l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 350 LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeec
Confidence 999999998 777899999999999999999999999999999999998887644 467777666666666666666666
Q ss_pred CC
Q 011416 200 ES 201 (486)
Q Consensus 200 e~ 201 (486)
++
T Consensus 430 ~~ 431 (438)
T COG2270 430 VP 431 (438)
T ss_pred CC
Confidence 54
No 229
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.13 E-value=4e-09 Score=114.29 Aligned_cols=137 Identities=14% Similarity=-0.026 Sum_probs=105.8
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHH--HHHHHHHH-hhhchhHHHHHHHHHHHHhhhhhhhhHhh
Q 011416 329 ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL--SCLFLLPL-VTYQSNILTTGLLFGARMCVMGAFTVSLI 405 (486)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (486)
...++......+..++.++++|+++||++||+++...... .......+ ....+.+.+++..++.|++.+...|...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 3466777788888899999999999999999975332222 11111122 22467788888889999999999999999
Q ss_pred hccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHH
Q 011416 406 YAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSV 465 (486)
Q Consensus 406 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 465 (486)
++.+.+|+++++.++|+.++..++|..+||.+.|++.+..++...++..+.+.+++.++.
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLAS 191 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998888777744334344433333
No 230
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=99.13 E-value=1.1e-09 Score=95.23 Aligned_cols=376 Identities=15% Similarity=0.104 Sum_probs=227.1
Q ss_pred hhchhh-hhcCCCcchh-HHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHH
Q 011416 47 VGPTVK-SEWNLSSTEE-SLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVG 124 (486)
Q Consensus 47 ~~~~~~-~~~~~s~~~~-g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 124 (486)
+.|.+. .+.|++..|+ .-+.-...-.+.+.-.|.=.+.|-.-.|++++.-.+.......+.-+.++.+.+-+.-+..|
T Consensus 27 ~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG 106 (433)
T KOG3810|consen 27 LTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYG 106 (433)
T ss_pred cchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcC
Confidence 334433 4456666554 23344455667777788888999999999999888888888888889999999999999999
Q ss_pred hccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCcHHHHHHhHHHHHHHHHHhhccCCCc
Q 011416 125 VGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPR--LDWRWLLGLSSIPSFILLAFLGFQPESP 202 (486)
Q Consensus 125 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~--~~w~~~f~~~~~~~~~~~~~~~~~~e~~ 202 (486)
...+.-.+-++++-+..+|+++.++.|...++.-.|-..|..++..+... .++...-.+.-....+..++..++|..+
T Consensus 107 ~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 107 PATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred hHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 98877777889999999999999999999999999999999999888753 3444444555444455566677777665
Q ss_pred hhhhhcCChHHHHHHHHHHHHhcCCCCCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhH
Q 011416 203 RYLCLKGRTAEAHRALEKIAQVNKTKLPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLA 282 (486)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 282 (486)
+....+.++++. ...+..+.+ .+.+...... .--..-...+.+..+++.
T Consensus 187 rSl~f~~~~~~~--~v~~~e~~~---------------------~~~~~~~~l~-------~~~~~l~~~l~~~y~np~- 235 (433)
T KOG3810|consen 187 RSLYFHRLEDKI--SVGDLEEMN---------------------PQASYMSYLR-------GAFVLLWRDLQECYSNPR- 235 (433)
T ss_pred hhhhhhcccccc--eeccchhcC---------------------ccchhhHHHH-------HHHHHHHHHHHHHhcCch-
Confidence 433222221110 000000000 0000000000 000000001112222222
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchh--
Q 011416 283 RTTILLWLL-LFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRK-- 359 (486)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~-- 359 (486)
++-|-. +......+|.+..+.+.+-+.... ......-|..=.+..+.++++.+..|.+--++.|.
T Consensus 236 ---ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~---------~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~ 303 (433)
T KOG3810|consen 236 ---LLKWSLWWALASCGYYQVTNYTQILWKEVAP---------NPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD 303 (433)
T ss_pred ---hhhhHHHHHHhhchhHHHHHHHHHHHHhhCC---------CchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhH
Confidence 122222 233445556666666554422110 01111122333444556667777778776555554
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHH
Q 011416 360 LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAV 439 (486)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g 439 (486)
..+.++....+-..+.+....+.|...+...+.........++....+++....+..|..+|+...+.-+-..+-..+
T Consensus 304 ~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i-- 381 (433)
T KOG3810|consen 304 LLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI-- 381 (433)
T ss_pred HHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE--
Confidence 344555555555666666678888888888888877777778777777777778888999998877665555444443
Q ss_pred HHHHhhc-----------cchHHHHHHHHHHHHHHHHhcc
Q 011416 440 ALVANCH-----------QMTAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 440 ~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~ 468 (486)
+.|..| +..-|.+.+++.++.....+..
T Consensus 382 -Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 382 -VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred -EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 244322 3456777888887776665444
No 231
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.13 E-value=1.2e-09 Score=118.63 Aligned_cols=141 Identities=15% Similarity=0.045 Sum_probs=120.4
Q ss_pred chhhhhcCCCcc-hhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhcc
Q 011416 49 PTVKSEWNLSST-EESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGL 127 (486)
Q Consensus 49 ~~~~~~~~~s~~-~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 127 (486)
+.+.+++|.+.. +.|++.+...++..++++++|++.||+++|+++.++.++.+++.++..+..+.+.+++..++.|++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 345677899999 9999999999999999999999999999999999999988888888888889999989999999999
Q ss_pred Ccc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHhHHHHH
Q 011416 128 GSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP-RLDWRWLLGLSSIPSF 189 (486)
Q Consensus 128 ~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~-~~~w~~~f~~~~~~~~ 189 (486)
+.. +...+++.+..|+++||+++|+.+....+|.++++.+++.+.. .+++...|++.+.+.+
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 887 6677888999999999999999999999999888888777643 2456666665554443
No 232
>PRK09848 glucuronide transporter; Provisional
Probab=99.12 E-value=1.1e-09 Score=105.96 Aligned_cols=134 Identities=16% Similarity=0.096 Sum_probs=103.4
Q ss_pred hhchhchh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC--CHHHHHHHH
Q 011416 44 LSFVGPTV-KSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP--NYITLITLR 120 (486)
Q Consensus 44 ~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~--~~~~l~~~r 120 (486)
.....|.+ ++.+|.+....++......++..++.++++++.||+|+|+++.++..+.+++.++..+.+ +++.+++..
T Consensus 247 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 326 (448)
T PRK09848 247 VSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVAL 326 (448)
T ss_pred HhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHH
Confidence 33344544 445676665555555555677888999999999999999999999998888887776654 677777788
Q ss_pred HHHHhccCcc-hhhhhhhccccCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 121 CLVGVGLGSG-HVFLSWFLEFVPPS-------NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 121 ~l~G~~~~~~-~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
++.|+|.+.. +...++..|..|.+ ++|...|+.+....+|..+++.+.+.+.+..|+
T Consensus 327 ~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 327 AIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8899998887 66667777777643 459999999999999999999998887665554
No 233
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.11 E-value=1.3e-09 Score=103.68 Aligned_cols=149 Identities=16% Similarity=-0.028 Sum_probs=135.0
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--chhHHHHHHHHHHHHhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY--QSNILTTGLLFGARMCVMGA 399 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 399 (486)
.++.+++.+-++.......+.+++.+.+|++.||+|.|+++..+.++.++..++.+.. .+.+.+.+.-++.|++.+..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 4678899999999999999999999999999999999999999999999998888873 34446677788999999999
Q ss_pred hhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHh-hccchHHHHHHHHHHHHHHHHhcccc
Q 011416 400 FTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVAN-CHQMTAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
+|....+..+-.|+++|++..++.....++|.+++-.+.|.+.+. .||...|++.+++.++..++.+.+..
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999998 99999999999999888877766653
No 234
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.08 E-value=2.2e-07 Score=92.20 Aligned_cols=148 Identities=14% Similarity=0.074 Sum_probs=120.4
Q ss_pred hchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHhhhhhhcCCC--------HHHHHH
Q 011416 48 GPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADN-YGRRMGFLGEALVTAGAGLLSSFSPN--------YITLIT 118 (486)
Q Consensus 48 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~a~~--------~~~l~~ 118 (486)
...+.+.+|.+.++...+...+....-+..+++|.++|+ +|+++.+.++.++..+|.++.+++.. ....++
T Consensus 11 vlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~ 90 (654)
T TIGR00926 11 VLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLL 90 (654)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHH
Confidence 344556789999999999999999999999999999996 59999999999999999888776421 233566
Q ss_pred HHHHHHhccCcc-hhhhhhhccccCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCcHHHHHHhHHH
Q 011416 119 LRCLVGVGLGSG-HVFLSWFLEFVPPS---NRGMWMVIFSSFWTIGSVSEAIGAWIIMPR-------LDWRWLLGLSSIP 187 (486)
Q Consensus 119 ~r~l~G~~~~~~-~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~-------~~w~~~f~~~~~~ 187 (486)
+-.+..+|.|+. +...+...|.++++ +|-..+.++..+.++|+.+++++...+.+. .+|...|.+.++.
T Consensus 91 gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~ 170 (654)
T TIGR00926 91 GLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAIL 170 (654)
T ss_pred HHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHH
Confidence 777888899988 88888999888754 367788999999999999999998888643 3699999998888
Q ss_pred HHHHHHHh
Q 011416 188 SFILLAFL 195 (486)
Q Consensus 188 ~~~~~~~~ 195 (486)
.++.++..
T Consensus 171 m~ia~lvf 178 (654)
T TIGR00926 171 MILALIVF 178 (654)
T ss_pred HHHHHHHH
Confidence 77765543
No 235
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.04 E-value=5.4e-06 Score=78.75 Aligned_cols=143 Identities=9% Similarity=0.009 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHhhHhhhhchhchhhhhcCC-----CcchhHHHHHHHHHHHHHH-HHHHhhhhhhhcchHHHHHHHHH
Q 011416 26 VLAYAGLGWVAEAMEIMILSFVGPTVKSEWNL-----SSTEESLITTSVFAGLVVG-AYAWGLVADNYGRRMGFLGEALV 99 (486)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----s~~~~g~~~s~~~~~~~i~-~~~~g~l~dr~G~r~~~~~~~~~ 99 (486)
.+....+..++..+....+ -++.+.+.+ ..+.+.++-+...+...+. .++.+++++|++|++++-.....
T Consensus 8 k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 3444444444444444443 345555544 3357889988887777666 89999999999999998887777
Q ss_pred HHHhhhhhhcC----CC---------------------------HHHHHHHHHHHHhccCcc-h-hhhhhhccccCCCch
Q 011416 100 TAGAGLLSSFS----PN---------------------------YITLITLRCLVGVGLGSG-H-VFLSWFLEFVPPSNR 146 (486)
Q Consensus 100 ~~~~~~~~~~a----~~---------------------------~~~l~~~r~l~G~~~~~~-~-~~~~~i~~~~~~~~r 146 (486)
+.+...++++. ++ .|...+..+...+-.... . .--..+.|.+..+|-
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa 163 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA 163 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 66666655543 11 222333333444433333 3 334788899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 147 GMWMVIFSSFWTIGSVSEAIGAWIIM 172 (486)
Q Consensus 147 ~~~~~~~~~~~~~G~~i~~~l~~~l~ 172 (486)
.|..++...+.++|.++++.+...+.
T Consensus 164 kRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 164 KRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888876
No 236
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.03 E-value=1.8e-08 Score=98.08 Aligned_cols=139 Identities=9% Similarity=-0.011 Sum_probs=103.6
Q ss_pred hhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc-----CCCH
Q 011416 39 MEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF-----SPNY 113 (486)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----a~~~ 113 (486)
..........+.+.+...-+....+++.+...++..++.+++++++||+|+|+.+..+..+..++.+...+ .++.
T Consensus 245 ~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (473)
T PRK10429 245 IASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNA 324 (473)
T ss_pred HHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhH
Confidence 33344444445555554445667778888777899999999999999999999999888776666554432 3466
Q ss_pred HHHHHHHHHHHhccCcc-hhhhhhhccccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 114 ITLITLRCLVGVGLGSG-HVFLSWFLEFVP-------PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 114 ~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
+.+++.-++.|++.+.. ....+++.|..+ .++.|..+|......-+|..+++.+.+.+.+..|+
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777888889988877 566678888755 34456689999999999999999999988765554
No 237
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.03 E-value=3.9e-09 Score=101.49 Aligned_cols=147 Identities=17% Similarity=0.220 Sum_probs=119.1
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF 109 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~ 109 (486)
..+..++............+.+.++.--++...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHH
Confidence 33444555555555555566665554334467888899999999999999999999999999999999999999998888
Q ss_pred CC--CHHHHHHHHHHHHhccCcc-hhhhhhhccccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 011416 110 SP--NYITLITLRCLVGVGLGSG-HVFLSWFLEFVP-------PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD 176 (486)
Q Consensus 110 a~--~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~ 176 (486)
.+ |.+.+++.-++.|++.+.. ....++++|..+ +++.|...|.......+|..+++.+.+.+.+..|
T Consensus 310 ~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 310 LGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 86 9999999999999999988 666788888776 3446888999999999999999998888765544
No 238
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.03 E-value=2.6e-08 Score=89.42 Aligned_cols=172 Identities=17% Similarity=0.090 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHH
Q 011416 285 TILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITI 364 (486)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~ 364 (486)
+.....+++...+..-..-...|++. +.++.+..++++....+..+..++++..+++.+|+|+|+-+..
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~-----------~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l 83 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLK-----------EVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL 83 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHH-----------HHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHH
Confidence 33444444445555555555556544 4557999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh---hchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHH
Q 011416 365 MFTLSCLFLLPLVT---YQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVAL 441 (486)
Q Consensus 365 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l 441 (486)
++.++++++.++.- ..+.......+++.+.+.+...+..+.++....+++....-+.+...++.+|.+++|.+.+.+
T Consensus 84 gL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 84 GLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999988863 445566777778889999999999999999999998888889999999999999999999998
Q ss_pred HHh-------------------hccchHHHHHHHHHHHHHHHHhc
Q 011416 442 VAN-------------------CHQMTAVVLLVVVIVTSILSVML 467 (486)
Q Consensus 442 ~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~ 467 (486)
..+ ...+.++...+...++..+....
T Consensus 164 ils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~ 208 (422)
T COG0738 164 ILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILL 208 (422)
T ss_pred HHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence 873 12445666666666655554443
No 239
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.01 E-value=4.1e-09 Score=104.10 Aligned_cols=144 Identities=17% Similarity=0.143 Sum_probs=126.3
Q ss_pred CCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHh
Q 011416 325 HPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSL 404 (486)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (486)
..+.....+..+++.++..+|.++.|.++||+|||+++..+.++..++.+..++.++.+...+.-++.|++.++......
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~ 193 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGF 193 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhH
Confidence 45667777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 405 IYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 405 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
.+..|.+++++|+.+..+ ......++.++|...+++.. +|...+++......+..++ +++.+|.
T Consensus 194 ~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 194 GLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred hhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 999999999999999999 88888999999999998877 6777777777776666555 4444343
No 240
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.99 E-value=1.5e-08 Score=93.17 Aligned_cols=157 Identities=25% Similarity=0.348 Sum_probs=127.1
Q ss_pred HHHHHhhHhhhhchhchhhhhcCCCc--chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC
Q 011416 34 WVAEAMEIMILSFVGPTVKSEWNLSS--TEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP 111 (486)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~ 111 (486)
.+....+........+.+..+++.+. .+.++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++.++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T COG0477 11 ALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP 90 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc
Confidence 33444666666777888888887776 5899999999999999999999999999999888888876666667777776
Q ss_pred C--HHHHHHHHHHHHhccCcc-hhhhhhhccccCC-CchhHHHHHHHH-HHHHHHHHHHHHHHHHhcC--CCcHHHHHHh
Q 011416 112 N--YITLITLRCLVGVGLGSG-HVFLSWFLEFVPP-SNRGMWMVIFSS-FWTIGSVSEAIGAWIIMPR--LDWRWLLGLS 184 (486)
Q Consensus 112 ~--~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~i~~~l~~~l~~~--~~w~~~f~~~ 184 (486)
+ .+.+++.|+++|++.+.. +...+++.|+.++ ++|+...+.... ...+|..+++.+++.+... .+||..|...
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 6 899999999999999877 7778899999987 688999998888 5888889998777776543 6899966665
Q ss_pred HHHHHH
Q 011416 185 SIPSFI 190 (486)
Q Consensus 185 ~~~~~~ 190 (486)
......
T Consensus 171 ~~~~~~ 176 (338)
T COG0477 171 ALLGLL 176 (338)
T ss_pred HHHHHH
Confidence 555443
No 241
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.99 E-value=6.7e-08 Score=85.49 Aligned_cols=351 Identities=15% Similarity=0.105 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhh-----hhcchHHHHH-H
Q 011416 23 QCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVAD-----NYGRRMGFLG-E 96 (486)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d-----r~G~r~~~~~-~ 96 (486)
+...+.++.+.+.+.+...+..+ .+|.+.+.-|.|.++.+...-++ .-+. .-+.+.++.| |+||||.-++ +
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay-~P~s-LKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY-WPFS-LKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh-hHHH-HHHHHHhhhHHHHHHhhccccceeeeh
Confidence 34455566677888998888888 89999998899988887654333 2222 3578899999 9999875332 3
Q ss_pred HHHHHHhhhhhhc-----------CCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHH
Q 011416 97 ALVTAGAGLLSSF-----------SPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSE 164 (486)
Q Consensus 97 ~~~~~~~~~~~~~-----------a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~ 164 (486)
..+.+..+.+.+. .++...+....++.-+.++.. .+.-.+.-....+++.|-+......+...|..++
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 3333333333222 234444444556666777777 5666777778888998888877777777777776
Q ss_pred HHHHHHHhc-------CCCcH---------HHHHHhHHHHHHHHHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCCC
Q 011416 165 AIGAWIIMP-------RLDWR---------WLLGLSSIPSFILLAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKTK 228 (486)
Q Consensus 165 ~~l~~~l~~-------~~~w~---------~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (486)
..+--.+.. ..+|. ...++.+.+.++.-.+..+..+++... ..+|....++.
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~----~~~e~~~~i~~-------- 253 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES----VDEELELGIHE-------- 253 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh----hhhhhhcCHHH--------
Confidence 554333321 11222 233444555555433333333322111 00000000000
Q ss_pred CCCchhhhccccCCCCCCCCccchhhcccCCCCCcccCCCchhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011416 229 LPNGKLVARRSTLPTGERAPPELVHLLSSNGGNKTTEGKSGLSLFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLISE 308 (486)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (486)
..+.+++.++-+..+.+ .......-+.+.+-....+.
T Consensus 254 ----------------------------------------~yk~l~~vLklk~v~~l---a~i~lt~K~gf~a~da~t~L 290 (510)
T KOG3574|consen 254 ----------------------------------------SYKLLRDVLKLKSVRWL---AGILLTGKLGFQAADALTSL 290 (510)
T ss_pred ----------------------------------------HHHHHHHHHcCccHHHH---HHHHHHHHHHhhhhhhccch
Confidence 00123333333322222 22222222222222222221
Q ss_pred hccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhc----------hhHHHHHHHHHHHHHHHHHh-
Q 011416 309 LSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAG----------RKLSITIMFTLSCLFLLPLV- 377 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g----------~~~~~~~~~~~~~~~~~~~~- 377 (486)
...++|.+..+.++.. +..++..++.+....|+. |+....+........+....
T Consensus 291 -----------kLle~Gv~ke~Lal~~----v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~ 355 (510)
T KOG3574|consen 291 -----------KLLEHGVPKEELALIA----VPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTP 355 (510)
T ss_pred -----------HHHHcCCChhHheeee----eehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhc
Confidence 1235678887766554 444455555555555442 22222222222222222111
Q ss_pred hhch---------hHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011416 378 TYQS---------NILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH 446 (486)
Q Consensus 378 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g 446 (486)
.... ....+....+.+.+....+...++..+++.++...|+.+.+.|+..++|+-.-..+..++.|..+
T Consensus 356 ~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 356 TLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred ccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 1111 11122223344445555566778889999999999999999999999999888888888888654
No 242
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.98 E-value=2.4e-08 Score=98.09 Aligned_cols=141 Identities=21% Similarity=0.130 Sum_probs=120.2
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccc
Q 011416 330 NLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAE 409 (486)
Q Consensus 330 ~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (486)
+.++..+...++..++.++.|+++|++|||+.+..+.++..++.++.....+...+.+.-++.|++.++...+...+.+|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 44788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhh--ccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 410 IYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC--HQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 410 ~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
+.|++.||...+..+....+|..++ .+.+...++. +|...+.+..+.+++..+. .++.||+
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 9999999999999999888877777 5556655543 6776666666666666655 4554444
No 243
>PRK09669 putative symporter YagG; Provisional
Probab=98.97 E-value=1.2e-08 Score=98.60 Aligned_cols=119 Identities=13% Similarity=0.053 Sum_probs=91.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhh-hc-CCCHHHHHHHHHHHHhccCcc-hhhhh
Q 011416 59 STEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLS-SF-SPNYITLITLRCLVGVGLGSG-HVFLS 135 (486)
Q Consensus 59 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~-~~-a~~~~~l~~~r~l~G~~~~~~-~~~~~ 135 (486)
.+..+.+.....+...++.+++++++||+|+|+.+..+.++.++..... .. .++.+.+++..++.|++.+.. +...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556666778888899999999999999999998877666544322 22 357777888889999999888 66678
Q ss_pred hhccccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 136 WFLEFVP-------PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 136 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
+++|..+ +++.|...+.......+|..+|+.+++.+.+..|+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8887775 23346778899999999999999999998776665
No 244
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.93 E-value=2.3e-08 Score=86.17 Aligned_cols=138 Identities=17% Similarity=0.072 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Q 011416 294 GNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFL 373 (486)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 373 (486)
......|.+..|.+++- +..|+++.+.........++..+| ++.|.+.||+|++.++.++.+...+++
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk-----------~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLK-----------SRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred HhcCcccchhhhhHHHH-----------HHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 34456677777777665 567899999999999999998875 889999999999999999999999998
Q ss_pred HHHhh------h-chhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 374 LPLVT------Y-QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVAN 444 (486)
Q Consensus 374 ~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~ 444 (486)
..+.. . .+.|.+.+..++.+.+.....+.......+.+| ++||++.|+.-....+++.+...+...+.+.
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 87765 1 233444444444445544455566666678888 5699999999999999999988887766654
No 245
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.93 E-value=3.2e-06 Score=82.46 Aligned_cols=174 Identities=13% Similarity=0.092 Sum_probs=127.4
Q ss_pred hHHHHHHHHHHHHHHHHhhH-hhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHH
Q 011416 22 YQCFVLAYAGLGWVAEAMEI-MILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY-GRRMGFLGEALV 99 (486)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~~~~~~~~ 99 (486)
..|.....+.......-+.. ......+..+.++++.+...+.-..+.+.-......+..+.++|-| ||-+++.++.++
T Consensus 34 g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i 113 (571)
T KOG1237|consen 34 GGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLI 113 (571)
T ss_pred chhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34544444333333333322 3346677888899999998888899999999999999999999976 898999988888
Q ss_pred HHHhhhhhhcCC----------------------C---HHHHHHHHHHHHhccCcc-hhhhhhhccccC---CC---chh
Q 011416 100 TAGAGLLSSFSP----------------------N---YITLITLRCLVGVGLGSG-HVFLSWFLEFVP---PS---NRG 147 (486)
Q Consensus 100 ~~~~~~~~~~a~----------------------~---~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~---~~---~r~ 147 (486)
..++..+..++. + ...++.+.-+..+|.|+. +...++-+|-++ ++ ++.
T Consensus 114 ~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~ 193 (571)
T KOG1237|consen 114 SLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIP 193 (571)
T ss_pred HHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcc
Confidence 777754432211 1 234666677788899988 877788888887 32 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHh
Q 011416 148 MWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFL 195 (486)
Q Consensus 148 ~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 195 (486)
..+.++....++|..++..+..+.-++.+|...|.+..+...+.++++
T Consensus 194 ~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 194 SFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 678899999999999999888888888999999988877766654443
No 246
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.92 E-value=1.3e-08 Score=98.36 Aligned_cols=150 Identities=13% Similarity=0.131 Sum_probs=119.8
Q ss_pred hhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhc----------CCCHHHHHHHH
Q 011416 51 VKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSF----------SPNYITLITLR 120 (486)
Q Consensus 51 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~----------a~~~~~l~~~r 120 (486)
..+.+|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++...... .++.+.++..-
T Consensus 279 ~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 279 TTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred EcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 34678999999999999999999999999999999999999999999999988755431 13444555667
Q ss_pred HHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----cHHHHHHh---HHHHHHH
Q 011416 121 CLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD-----WRWLLGLS---SIPSFIL 191 (486)
Q Consensus 121 ~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~-----w~~~f~~~---~~~~~~~ 191 (486)
++.+++.+.. .+...++.+..|++++|...++..+..++|..+++.+++.+.+..| ++..+... .+..++.
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~ 438 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLP 438 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 8888888877 6778899999999999999999999999999999999999988766 44444332 2333333
Q ss_pred HHHhhccCC
Q 011416 192 LAFLGFQPE 200 (486)
Q Consensus 192 ~~~~~~~~e 200 (486)
+.+.+++|+
T Consensus 439 l~~~~llP~ 447 (468)
T TIGR00788 439 LPLLHLLPR 447 (468)
T ss_pred HHHHHhCCC
Confidence 444456785
No 247
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.90 E-value=5.4e-08 Score=92.90 Aligned_cols=152 Identities=14% Similarity=0.055 Sum_probs=130.4
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhh
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFT 401 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (486)
++.+....+.+...+.+.++.+++.+.++.+.||++..+.+....+...+..++.....+.+...+.-++.|++.+..+|
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccch
Confidence 45567778889999999999999999999999999977666666655555554444477888899999999999999999
Q ss_pred hHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH------hhccchHHHHHHHHHHHHHHHHhccccccc
Q 011416 402 VSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA------NCHQMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
....++...+.+++|+.-+|+.++..++|+++|+.+...+.+ ..||++.|++-+++.++..++.++..|+..
T Consensus 154 ~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 154 GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCCh
Confidence 999999999999999999999999999999999999988743 457999999999999999988888776543
No 248
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.86 E-value=1e-08 Score=70.92 Aligned_cols=81 Identities=12% Similarity=0.135 Sum_probs=75.7
Q ss_pred HHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHH
Q 011416 37 EAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITL 116 (486)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l 116 (486)
.++.+..+.|.+|.+++|.++|.++.|++.+..++||.++.+...++.++..+++.+..+.+...+.++.+++.++.+.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 45778999999999999999999999999999999999999999999999889999999999999999999999987765
Q ss_pred H
Q 011416 117 I 117 (486)
Q Consensus 117 ~ 117 (486)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 3
No 249
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.84 E-value=3.2e-08 Score=87.31 Aligned_cols=129 Identities=16% Similarity=0.108 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHH----HHHHHHHHHHhccCcchhhhhhhccccCCC
Q 011416 69 VFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYI----TLITLRCLVGVGLGSGHVFLSWFLEFVPPS 144 (486)
Q Consensus 69 ~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~----~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~ 144 (486)
..+.-.-|.++.+.+.||+|||+.+..+.+++++..++...+.+-. .++.+|++.. |.+.+.+.|..|.+|.+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis---g~fqvaYvYtPEVyPTa 466 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS---GAFQVAYVYTPEVYPTA 466 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh---chheEEEEecCcccchh
Confidence 3456677889999999999999999999999999988877664322 3445565542 33366778888999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCCCc
Q 011416 145 NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESP 202 (486)
Q Consensus 145 ~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~ 202 (486)
-|+...|.-....-+|.++.|.++ +.....-..+..+.+.+.++..+...++|-.+
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999999999999999999999999 33334444556667777777777777777544
No 250
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2.5e-07 Score=86.50 Aligned_cols=144 Identities=17% Similarity=0.173 Sum_probs=108.7
Q ss_pred HHHHHHhhHhhhhchhchh-hhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC
Q 011416 33 GWVAEAMEIMILSFVGPTV-KSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP 111 (486)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~ 111 (486)
.+++........+.....+ .--+|.+..+..+.......+..++.+++.++.+|+|+|+++.++.++..++.++..+.+
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 3344444444444444443 334566777778888888888888899999999999999999999999999999888876
Q ss_pred --CHHHHHHHHHHHHhccCcc-hhhhhhhccccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 011416 112 --NYITLITLRCLVGVGLGSG-HVFLSWFLEFVP-------PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD 176 (486)
Q Consensus 112 --~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~ 176 (486)
+.+.+++..++.++|.+.. +...++++|..+ .+.-|...+......=+|.+++..+.++..+..|
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7888889999999999888 555577766553 2344777788888888888888888777665443
No 251
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.79 E-value=2.7e-07 Score=81.78 Aligned_cols=159 Identities=14% Similarity=0.084 Sum_probs=125.9
Q ss_pred HHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHHHHHhhhhhhcCCCHH
Q 011416 36 AEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNY-GRRMGFLGEALVTAGAGLLSSFSPNYI 114 (486)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~a~~~~ 114 (486)
+..+..++.-.-+|.+..|-|+|..+.|++.+...+.....++....+++|. .+|+..+....++.++...+.+.+.-.
T Consensus 219 lqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~ 298 (395)
T COG2807 219 LQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQL 298 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhH
Confidence 3344444555568999999999999999999999999999999999999976 567778888888888888888877544
Q ss_pred HHHHHHHHHHhccCcc-hhhhhhhcccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHhHHHHHHH
Q 011416 115 TLITLRCLVGVGLGSG-HVFLSWFLEFV-PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL-DWRWLLGLSSIPSFIL 191 (486)
Q Consensus 115 ~l~~~r~l~G~~~~~~-~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~-~w~~~f~~~~~~~~~~ 191 (486)
.+.. -++.|+|.|.. +.....+.+.. ++++-++..++.+....+=..+||.+.|++.|.. +|+..+...+...+..
T Consensus 299 ~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 299 PILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred HHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHH
Confidence 4333 48999998888 77878777554 4566677778888877777888999999998855 6999988877777766
Q ss_pred HHHh
Q 011416 192 LAFL 195 (486)
Q Consensus 192 ~~~~ 195 (486)
.+.-
T Consensus 378 ~i~G 381 (395)
T COG2807 378 LIFG 381 (395)
T ss_pred HHHH
Confidence 5543
No 252
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.74 E-value=9.2e-07 Score=81.85 Aligned_cols=141 Identities=13% Similarity=0.071 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhhHhhhhchhchhhhh--cCCCcchhHHHHHHHHHHHHHHHHHHhhhhh-----hhcchHHHHH------
Q 011416 29 YAGLGWVAEAMEIMILSFVGPTVKSE--WNLSSTEESLITTSVFAGLVVGAYAWGLVAD-----NYGRRMGFLG------ 95 (486)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d-----r~G~r~~~~~------ 95 (486)
++.+.+++.+...+.....+|.+.++ -+.|.+|.|...-+ ..-+. .-+++.++.| |+||||.-++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 45566788887777765667888887 68888888764322 22222 2456666666 8999986443
Q ss_pred HHHHHHHhhhh----------hhcC-------CCH--HHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHH
Q 011416 96 EALVTAGAGLL----------SSFS-------PNY--ITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSS 155 (486)
Q Consensus 96 ~~~~~~~~~~~----------~~~a-------~~~--~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~ 155 (486)
|..+..++.-. -.+. ++. ..+....++.=+-++.. .++-.+.-....+++++.|......
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 33333333322 0000 011 12333333343444555 5555677777788889888877777
Q ss_pred HHHHHHHHHHHHHHHH
Q 011416 156 FWTIGSVSEAIGAWII 171 (486)
Q Consensus 156 ~~~~G~~i~~~l~~~l 171 (486)
+.+.|..++..+--.+
T Consensus 162 G~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLAL 177 (544)
T ss_pred HhhhhHHHHHHHHHhh
Confidence 7777777766554444
No 253
>PRK11462 putative transporter; Provisional
Probab=98.73 E-value=3.5e-07 Score=88.47 Aligned_cols=119 Identities=13% Similarity=0.006 Sum_probs=80.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCC--HHHHHHHHHHHHhccCcc-hhhhh
Q 011416 59 STEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPN--YITLITLRCLVGVGLGSG-HVFLS 135 (486)
Q Consensus 59 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~--~~~l~~~r~l~G~~~~~~-~~~~~ 135 (486)
....+.+.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.++ ...+++.-++.|++.+.. +...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567777888899999999999999999999877655544443333333322 334445556677776655 43445
Q ss_pred hhccccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 136 WFLEFVP-------PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 136 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
++.|..+ +++.|...+......-+|..+++.+++.+.+..|+
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6665554 33446666777788889999999988887654443
No 254
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.73 E-value=4.1e-08 Score=91.06 Aligned_cols=156 Identities=13% Similarity=0.074 Sum_probs=135.4
Q ss_pred hhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHH
Q 011416 42 MILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRC 121 (486)
Q Consensus 42 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 121 (486)
..+-..+-.-.||++..+...|.....-..+-.+.-++.+++.+|+|+-+++.+++.+.++=.+..+..+|.|+.+-..+
T Consensus 388 ~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPiei 467 (618)
T KOG3762|consen 388 GLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEI 467 (618)
T ss_pred HHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHH
Confidence 33333344457888888888898888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCcc-hhhhhhhccccCCCchhHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhc
Q 011416 122 LVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSS-FWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGF 197 (486)
Q Consensus 122 l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 197 (486)
++|+..+.. ....+|++...||+-|..+-++.+. ..++|--+|.+++|.+.+.++=|..|...++.+++.++....
T Consensus 468 lqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 468 LQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 6777899999999999999888754 567899999999999999999999999988887776554433
No 255
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.70 E-value=1.1e-07 Score=86.73 Aligned_cols=114 Identities=19% Similarity=0.089 Sum_probs=92.5
Q ss_pred CCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh---ch----hHHHHHHHHHHHHhhh
Q 011416 325 HPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTY---QS----NILTTGLLFGARMCVM 397 (486)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~ 397 (486)
++++...+.......++.++|+++.|++.||+|||++....++++.++.++.... ++ .+.+...=+++|++.+
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 3667778888899999999999999999999999999999999988888755541 11 2344455567899999
Q ss_pred hhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHH
Q 011416 398 GAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 438 (486)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~ 438 (486)
+=+|+..+..+|....+.||+-.+.+.+++..|...|.++.
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt 200 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVA 200 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence 99999999999999999999999888777776655555444
No 256
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.66 E-value=3.6e-06 Score=76.63 Aligned_cols=147 Identities=17% Similarity=0.137 Sum_probs=121.9
Q ss_pred chhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhh-hhcchHHHHHHHHHHHHhhhhh---hcCCCHHHHHHHHHHHH
Q 011416 49 PTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVAD-NYGRRMGFLGEALVTAGAGLLS---SFSPNYITLITLRCLVG 124 (486)
Q Consensus 49 ~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d-r~G~r~~~~~~~~~~~~~~~~~---~~a~~~~~l~~~r~l~G 124 (486)
|+=.+-||+|..|...+...+..|..++....|++.. |.++|+.-.+++...+++..+. +...+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 3445669999999999999999999999999999888 6788888888888887776654 44578899999999999
Q ss_pred hccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCcHHHHHHhHHHHHHHHH
Q 011416 125 VGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP----------RLDWRWLLGLSSIPSFILLA 193 (486)
Q Consensus 125 ~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~----------~~~w~~~f~~~~~~~~~~~~ 193 (486)
++.|.. ....+.+.+...+++.|..+|.+.....++..++..+++.+.| ..+|..+|.+.++..++.+.
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 999999 5556788899999999999999999999999999999988654 23577788887776666554
Q ss_pred Hh
Q 011416 194 FL 195 (486)
Q Consensus 194 ~~ 195 (486)
+.
T Consensus 393 ll 394 (403)
T PF03209_consen 393 LL 394 (403)
T ss_pred HH
Confidence 43
No 257
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.58 E-value=9.7e-10 Score=106.67 Aligned_cols=143 Identities=17% Similarity=0.108 Sum_probs=114.3
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc---hhHHHHHHHHHHHHhhhhhhhhHhh
Q 011416 329 ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ---SNILTTGLLFGARMCVMGAFTVSLI 405 (486)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (486)
...+.......++.++|.++.|++.||+|||+.+..+..+..++.++..+.+ +.+...+.-++.|++.++..+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4567788889999999999999999999999999999999999999888877 7888888889999999999999999
Q ss_pred hccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhh---ccchHHHHHHHHHHHHHHHHhcccccc
Q 011416 406 YAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC---HQMTAVVLLVVVIVTSILSVMLIPFET 472 (486)
Q Consensus 406 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (486)
++.|..|+++|+...++.+....+|..++..+.-.+.+.. +|...+.......++..+.. .+.||+
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pES 194 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccc
Confidence 9999999999999999999888888888777654332222 35555555555554443333 334443
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.56 E-value=4.2e-07 Score=62.67 Aligned_cols=71 Identities=17% Similarity=0.160 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHH
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVT 100 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~ 100 (486)
+...+++.+...+...|.+|.+.++.|+|..|+|.+.++..+...++.+++|.++||+++++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34556777777888888999999999999999999999999999999999999999999988877765543
No 259
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.55 E-value=1.6e-05 Score=71.32 Aligned_cols=152 Identities=14% Similarity=-0.018 Sum_probs=110.8
Q ss_pred cCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhh
Q 011416 323 SHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTV 402 (486)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (486)
++|++..+++..+........+...+.|.+.||+|||+.-+...++..++++.-- .++.+.+++.=++.|++....++.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaTSLLfS~ 141 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLFSA 141 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999999998888888887776443 456667777778888888887776
Q ss_pred Hhhhc-cc----cccccchhhHhHHHHH-HHHHHHHHHHHHHHHHHHhhcc--chHHHHHHHHHHHHHHHHhcccccccC
Q 011416 403 SLIYA-AE----IYPTSVRSTGAGAANA-MGRIGGMVCPLVAVALVANCHQ--MTAVVLLVVVIVTSILSVMLIPFETKG 474 (486)
Q Consensus 403 ~~~~~-~~----~~~~~~~~~~~g~~~~-~~~~g~~~~~~i~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (486)
.-++. .| -+|++..+...+.... .+.+-.+.+..+...+.+..+. ..+|.....+.+++.++.....+|..+
T Consensus 142 FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 142 FESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 65543 23 3555555665555552 3344555666666666676554 678888888888888777766666654
Q ss_pred C
Q 011416 475 Q 475 (486)
Q Consensus 475 ~ 475 (486)
.
T Consensus 222 ~ 222 (354)
T PF05631_consen 222 D 222 (354)
T ss_pred C
Confidence 4
No 260
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.49 E-value=0.00015 Score=68.97 Aligned_cols=108 Identities=12% Similarity=0.040 Sum_probs=70.1
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHhchh-HHHHHHHHHHHHHHHHHh------------hhchhHHHHHHHHHHHHhh
Q 011416 330 NLYIDEFITSLAEIPGLLLAAILVDTAGRK-LSITIMFTLSCLFLLPLV------------TYQSNILTTGLLFGARMCV 396 (486)
Q Consensus 330 ~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ 396 (486)
..-.....+.++..+|+.+..+..- -++| +.+.+..+.=.+..-++. ..++.+..++..++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 4456677888999999986654311 1122 122222222222211111 1235566777888899999
Q ss_pred hhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHH
Q 011416 397 MGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 438 (486)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~ 438 (486)
|...+..+.+..+..++++|..+-.+...+-.+|-.+|..+.
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888887777777777777777653
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.49 E-value=0.00064 Score=63.46 Aligned_cols=152 Identities=11% Similarity=0.013 Sum_probs=101.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCC---CcchhHHHHHHHHH-HHHHHHHHHhhhhhhhcchHHH
Q 011416 18 GFGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNL---SSTEESLITTSVFA-GLVVGAYAWGLVADNYGRRMGF 93 (486)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~G~r~~~ 93 (486)
+.++..+..+..+.+..++..+....+- .+.+.+.+ .+..+.++-+..-+ +..+..++.+++.+++.+.+++
T Consensus 20 pi~r~E~~kflpl~Ll~f~I~~ny~~lR----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF 95 (509)
T COG3202 20 PIRRYELKKFLPLALLFFCILFNYNLLR----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVF 95 (509)
T ss_pred eccHHHHHHHHHHHHHHHHHHHHHHHHH----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHH
Confidence 3455666666666666666666555543 34444443 45667777777777 7788899999999999999998
Q ss_pred HHHHHHHHHhhhhhhcC---------CC-----------------------HHHHHHHHHHHHhccCcc-h-hhhhhhcc
Q 011416 94 LGEALVTAGAGLLSSFS---------PN-----------------------YITLITLRCLVGVGLGSG-H-VFLSWFLE 139 (486)
Q Consensus 94 ~~~~~~~~~~~~~~~~a---------~~-----------------------~~~l~~~r~l~G~~~~~~-~-~~~~~i~~ 139 (486)
-+-+..+....+++++. ++ .|...+...+.=+=.... . .-.....|
T Consensus 96 ~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNe 175 (509)
T COG3202 96 YIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANE 175 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777666666665542 11 122222222222222222 1 12245668
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 011416 140 FVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP 173 (486)
Q Consensus 140 ~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~ 173 (486)
.+..+|-.|..++++.+.+++..++..+..++.+
T Consensus 176 itt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 176 ITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888999999999999999999999988888865
No 262
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.47 E-value=8e-06 Score=64.95 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=92.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhh
Q 011416 59 STEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWF 137 (486)
Q Consensus 59 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i 137 (486)
+..--.-.++.+....+++++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-++.|++.+.. .....++
T Consensus 36 ~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~yl 114 (156)
T PF05978_consen 36 AGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYL 114 (156)
T ss_pred ccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHH
Confidence 3333344566777788888999999999999999999999988655443 5578889999999999999999 5555789
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 138 LEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII 171 (486)
Q Consensus 138 ~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l 171 (486)
.+..++++|++..+++......+.++|.++...+
T Consensus 115 t~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 115 TSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888888776654
No 263
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.38 E-value=2e-05 Score=74.99 Aligned_cols=138 Identities=20% Similarity=0.163 Sum_probs=112.6
Q ss_pred HHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchh
Q 011416 338 TSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRS 417 (486)
Q Consensus 338 ~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (486)
.++..++.+...|.++||+|||..+......+.+....+.+.. ++..+ ..-...+....+....+++++....+.|.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHHH
Confidence 3677888889999999999999999888888777766666544 22222 22223344556678899999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccccccCCCcc
Q 011416 418 TGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFETKGQELS 478 (486)
Q Consensus 418 ~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (486)
...|+.+.....+..++|.+.+.+.+..|....+.+..+..++..+......||+...+.+
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 9999999999999999999999999999999999999999999999999888887655443
No 264
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.37 E-value=0.0027 Score=61.08 Aligned_cols=154 Identities=10% Similarity=0.004 Sum_probs=95.5
Q ss_pred CCchHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHH-HHHHHHHHHhhhhhhhcchHHHHHHH
Q 011416 19 FGKYQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFA-GLVVGAYAWGLVADNYGRRMGFLGEA 97 (486)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~G~r~~~~~~~ 97 (486)
..+..+..+..+.+..++..+.....-..-..+.-.-. ..+.+..+-....+ ...+......++++|+++.+++-+..
T Consensus 18 i~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~-gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~ 96 (491)
T PF03219_consen 18 IHRSELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ-GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIII 96 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 34555666666666666666665554433333221111 45556666554444 45566778999999999999887766
Q ss_pred HHHHHhhhhhhcC---------CC----------------------HHHHHHHHHHHHhccCcc-hh-hhhhhccccCCC
Q 011416 98 LVTAGAGLLSSFS---------PN----------------------YITLITLRCLVGVGLGSG-HV-FLSWFLEFVPPS 144 (486)
Q Consensus 98 ~~~~~~~~~~~~a---------~~----------------------~~~l~~~r~l~G~~~~~~-~~-~~~~i~~~~~~~ 144 (486)
..+.....++++. ++ .|.+.+.-++.-+-.... +. --.+..|.++.+
T Consensus 97 ~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~ 176 (491)
T PF03219_consen 97 IPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVE 176 (491)
T ss_pred HHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 6655555444432 11 112222222222222222 22 236677999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 011416 145 NRGMWMVIFSSFWTIGSVSEAIGAWIIMP 173 (486)
Q Consensus 145 ~r~~~~~~~~~~~~~G~~i~~~l~~~l~~ 173 (486)
|-.|..+++..+.++|.++++.+...+.+
T Consensus 177 eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 177 EAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888776
No 265
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.33 E-value=1.7e-05 Score=79.10 Aligned_cols=145 Identities=11% Similarity=0.014 Sum_probs=110.0
Q ss_pred CCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHhhhch--------hHHHHHHHHHHHH
Q 011416 324 HHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKLSITIMFTLSCLFLLPLVTYQS--------NILTTGLLFGARM 394 (486)
Q Consensus 324 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 394 (486)
.+.+...+......+....-+..+++|++.|+ +|+++.+.++.++..++..++.+... ....+..+.+..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 36777777777777777777788899999997 69999999999998888877765211 1234566677778
Q ss_pred hhhhhhhhHhhhcccccccc---chhhHhHHHHHHHHHHHHHHHHHHHHHHHhh-------ccchHHHHHHHHHHHHHHH
Q 011416 395 CVMGAFTVSLIYAAEIYPTS---VRSTGAGAANAMGRIGGMVCPLVAVALVANC-------HQMTAVVLLVVVIVTSILS 464 (486)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~-------g~~~~~~~~~~~~~~~~~~ 464 (486)
+.++.-|...+...|.++++ .+...+.+.....++|+.+++.+.+++.+.. +|...|.+.+++++++.++
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 88888898888888888653 3677888888999999999999999987553 4666777777777766665
Q ss_pred Hhcc
Q 011416 465 VMLI 468 (486)
Q Consensus 465 ~~~~ 468 (486)
....
T Consensus 178 f~~g 181 (654)
T TIGR00926 178 FMAG 181 (654)
T ss_pred HHHh
Confidence 5443
No 266
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.31 E-value=5e-06 Score=78.26 Aligned_cols=107 Identities=18% Similarity=0.126 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHhhhhhhcC---CC------HHHHHHHHHHHHhccCcc-hhhhhhhccccCCC---chhHHHHHHHHHH
Q 011416 91 MGFLGEALVTAGAGLLSSFS---PN------YITLITLRCLVGVGLGSG-HVFLSWFLEFVPPS---NRGMWMVIFSSFW 157 (486)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~a---~~------~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 157 (486)
|++.++.++..+|.++..++ ++ .+.++++-++.++|.|+. +...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888874332 22 267889999999999999 99999999998765 4677888999999
Q ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhc
Q 011416 158 TIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGF 197 (486)
Q Consensus 158 ~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 197 (486)
++|..++..+.+++.++.||.+.|.+.++..++.++....
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988877776555443
No 267
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.29 E-value=1.9e-05 Score=74.30 Aligned_cols=151 Identities=15% Similarity=0.116 Sum_probs=111.4
Q ss_pred CCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhch-hHHHHHHHHHHHHHHHHHhh----hc-hhHHHHHHHHHHHHhhh
Q 011416 324 HHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGR-KLSITIMFTLSCLFLLPLVT----YQ-SNILTTGLLFGARMCVM 397 (486)
Q Consensus 324 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~ 397 (486)
.+.+.+..|+......++..++.++.|+...|.+. |+.++.+.++++++.++... .+ ..+.+.+.-++.|++.
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~- 144 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV- 144 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-
Confidence 56777888999999999999999999999999875 78888899999988887733 22 3445555555655553
Q ss_pred hhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhh-------------ccchHHHHHHHHHHHHHHH
Q 011416 398 GAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANC-------------HQMTAVVLLVVVIVTSILS 464 (486)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~-------------g~~~~~~~~~~~~~~~~~~ 464 (486)
+.....-.++++..-.+.|.++++..+...-+|.++||.+...+.... -+..+-++.+.+.++..+.
T Consensus 145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~ 224 (488)
T KOG2325|consen 145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVI 224 (488)
T ss_pred ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHH
Confidence 345677888888777788899888888877788888877654433211 1456677888888888888
Q ss_pred HhcccccccCC
Q 011416 465 VMLIPFETKGQ 475 (486)
Q Consensus 465 ~~~~~~~~~~~ 475 (486)
...+.+|..+.
T Consensus 225 i~~~f~E~~~~ 235 (488)
T KOG2325|consen 225 ILFFFKEVYRG 235 (488)
T ss_pred HHhheeecccC
Confidence 77777665443
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.14 E-value=0.00024 Score=65.10 Aligned_cols=108 Identities=16% Similarity=0.089 Sum_probs=62.7
Q ss_pred hHHHHHH-HHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---------hhchhHHHHHHHHHHHHhhhhhh
Q 011416 331 LYIDEFI-TSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV---------TYQSNILTTGLLFGARMCVMGAF 400 (486)
Q Consensus 331 ~~~~~~~-~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 400 (486)
.-+.... +.+...+|.+...++-++- ||... +..++-.+..-++. ...+.+.......++++..|-..
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~-i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPD-PRKLT-IPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCC-Cceeh-HHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 3344444 6777777766655554333 23222 22222211111111 24566777888888999999999
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHH
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVAL 441 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l 441 (486)
+..+.+..+..|++++-.+-.+....-..|-+.|.. .+++
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~-~s~l 401 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL-LSWV 401 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH-HHHH
Confidence 999999999998887766544444444444444443 4444
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.94 E-value=0.0021 Score=61.44 Aligned_cols=152 Identities=8% Similarity=-0.039 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHH-HHHHHHHHHHhchhH
Q 011416 282 ARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPG-LLLAAILVDTAGRKL 360 (486)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~g~l~dr~g~~~ 360 (486)
.+.++.....+++..+.|+..=..-..+. ....+.+.+......+...+...+. .++-+++++|++|++
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~lKD~lv----------v~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~ 75 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRDTKDTLV----------VTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEA 75 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhee----------ecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 35566666666666666665544433332 0111223345555555555554444 788899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh-----c--------------------------hhHHHHHHHHHHHHhhhhhhh-hHhhhcc
Q 011416 361 SITIMFTLSCLFLLPLVTY-----Q--------------------------SNILTTGLLFGARMCVMGAFT-VSLIYAA 408 (486)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~-----~--------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 408 (486)
+..+........++++.+. + +.|.................+ ..|.+++
T Consensus 76 lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 76 LFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8866555554444443321 0 122223333344444444555 8899999
Q ss_pred ccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 409 EIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 443 (486)
Q Consensus 409 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~ 443 (486)
|.+..++..+.+++....+++|..+++.+..++.+
T Consensus 156 di~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 156 QITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888764
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.90 E-value=0.00045 Score=66.19 Aligned_cols=148 Identities=18% Similarity=0.106 Sum_probs=104.6
Q ss_pred cCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHh-----chhHHHHHHHHHHHHHHHHHhhh----chhHHHHHHHHHHH
Q 011416 323 SHHPQDANLYIDEFITSLAEIPGLLLAAILVDTA-----GRKLSITIMFTLSCLFLLPLVTY----QSNILTTGLLFGAR 393 (486)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 393 (486)
+++.++.+.........+.- ...++.|.++|-+ +||..+.++.++..++.+.+... .+.....+++++..
T Consensus 19 ~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~ 97 (433)
T PF03092_consen 19 DLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLAS 97 (433)
T ss_pred HcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHH
Confidence 45788887776665555443 4467999999976 35556666666665555544442 23344455556666
Q ss_pred HhhhhhhhhHhhhccccccc--cchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhccccc
Q 011416 394 MCVMGAFTVSLIYAAEIYPT--SVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
++....-.+.-+...|...+ +.+|...+.......+|+.++..+.|.+.+..++...|.+.+.+..+..+..+.+.+|
T Consensus 98 ~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 98 FGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 66666667777777777522 2277888888999999999999999999999999888888888877777666666655
No 271
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.85 E-value=0.0029 Score=50.49 Aligned_cols=115 Identities=12% Similarity=0.003 Sum_probs=91.2
Q ss_pred CCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhh
Q 011416 327 QDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIY 406 (486)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (486)
++..-.....+......+..++.+.+.+++|.|+.+.++.+...+-..... .++.+..+....+.|++.+..+...-.+
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~-~~~~~~l~~~s~l~G~~~a~lW~aqg~y 113 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF-YPNSYTLYPASALLGFGAALLWTAQGTY 113 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHhhhhHHhhHhhhHH
Confidence 333334445566666778888899999999999999999988876555543 4556777888889999999999998889
Q ss_pred ccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 407 AAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV 442 (486)
Q Consensus 407 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~ 442 (486)
+.+...++.+++..++.-.+.+.+.++|..+.-.+.
T Consensus 114 lt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 114 LTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888877765443
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.81 E-value=0.00023 Score=60.75 Aligned_cols=107 Identities=15% Similarity=0.029 Sum_probs=58.8
Q ss_pred HHHHHHhhHHHHHHHHHHHHHH-hchhHHHH----HHHHHHHHHHHHHhh-h-c---hhHHHHHHHHHHHHhhhhhhhhH
Q 011416 334 DEFITSLAEIPGLLLAAILVDT-AGRKLSIT----IMFTLSCLFLLPLVT-Y-Q---SNILTTGLLFGARMCVMGAFTVS 403 (486)
Q Consensus 334 ~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~----~~~~~~~~~~~~~~~-~-~---~~~~~~~~~~~~~~~~~~~~~~~ 403 (486)
...+.-.+.++|.+..|...+. +.||+.+. .+.++..+..+.... . . ......+..++.|++.-+..++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3334334444555555666654 45555443 222222222222111 1 1 23445666677777777777877
Q ss_pred hhhcccc--ccccchhhHhHHHHHHHHHHHHHHHHHHHH
Q 011416 404 LIYAAEI--YPTSVRSTGAGAANAMGRIGGMVCPLVAVA 440 (486)
Q Consensus 404 ~~~~~~~--~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~ 440 (486)
.....|. ..|++.|...|+.-.++++.-.+.-.+...
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~ 264 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSV 264 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777765 455667887787777777666665555443
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.63 E-value=0.00041 Score=63.96 Aligned_cols=174 Identities=13% Similarity=0.014 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-hHHHHHHHHHHHHhhh
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGR-RMGFLGEALVTAGAGL 105 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~~~~~~~~~~~~~~ 105 (486)
+.++.+++.........+...+......-|.+....|++.....++..+++...|.+.||... |.++.+......++..
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~ 347 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL 347 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 444444455544445555555554555566777889999999999999999999999999865 6666666655555532
Q ss_pred hhhcC----CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---c
Q 011416 106 LSSFS----PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLD---W 177 (486)
Q Consensus 106 ~~~~a----~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~---w 177 (486)
..... .+.+.++..-.+.|.+.... |...-+-.|...|..-+.-.|+.+...++=..+-..+.+.+.+..+ |
T Consensus 348 ~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~ 427 (480)
T KOG2563|consen 348 MLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGN 427 (480)
T ss_pred HHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCC
Confidence 22221 23445666667777777666 7777788887777666777787777766666666666666666555 3
Q ss_pred HH-HHHHhHHHHHHHHHHhhccCC
Q 011416 178 RW-LLGLSSIPSFILLAFLGFQPE 200 (486)
Q Consensus 178 ~~-~f~~~~~~~~~~~~~~~~~~e 200 (486)
.. .-+......++..++..+++|
T Consensus 428 ~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 428 TFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred CccchhHhHHHHHHHHHHHhhhhh
Confidence 33 333333333444444444443
No 274
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.51 E-value=0.0013 Score=45.40 Aligned_cols=47 Identities=17% Similarity=0.066 Sum_probs=41.7
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHH
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL 368 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 368 (486)
++.|.++.+++....+..+..+++.++.|.++||+++++.......+
T Consensus 28 ~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 28 KQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 45789999999999999999999999999999999998877665544
No 275
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.45 E-value=0.0072 Score=52.84 Aligned_cols=133 Identities=11% Similarity=-0.041 Sum_probs=87.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcchhhhhhhcccc
Q 011416 62 ESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSGHVFLSWFLEFV 141 (486)
Q Consensus 62 ~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~ 141 (486)
.|.+.-+-.+-..+..+.+....||+---.=..+..++.+.+..+.++++|.++-+.+-.+..++.|..-+..--++..+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 35555556666777778888889987543334566778888999999999999999999999999888743333333444
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHhHHHHHHHHHHhhcc
Q 011416 142 PPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP--RLDWRWLLGLSSIPSFILLAFLGFQ 198 (486)
Q Consensus 142 ~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~--~~~w~~~f~~~~~~~~~~~~~~~~~ 198 (486)
++. ..+-++.+.+.+.++|..--..+.+ ..+-|...++...+-++....++++
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhe
Confidence 332 3344555566666666655445544 3567777777666555554444444
No 276
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.22 E-value=0.035 Score=50.41 Aligned_cols=116 Identities=24% Similarity=0.152 Sum_probs=85.6
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch--hHHHHHHHHHHHHhhhhhhhhHhhh
Q 011416 329 ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQS--NILTTGLLFGARMCVMGAFTVSLIY 406 (486)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (486)
...+.......+...++.++.|.+.||+|||+.+..+......+.+......+ .+.........+++.+...+....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 35677788888888888899999999999997777766553444333333333 4444455555677777888899999
Q ss_pred ccccccc-cchhhHhHHHHH-HHHHHHHHHHHHHHHHHHh
Q 011416 407 AAEIYPT-SVRSTGAGAANA-MGRIGGMVCPLVAVALVAN 444 (486)
Q Consensus 407 ~~~~~~~-~~~~~~~g~~~~-~~~~g~~~~~~i~g~l~~~ 444 (486)
..|..|+ +.++...+.... ...++..++|.+.+.+.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987 568888888888 5778888888777766655
No 277
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.20 E-value=6.5e-05 Score=73.50 Aligned_cols=152 Identities=11% Similarity=0.004 Sum_probs=2.4
Q ss_pred ccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-------------------
Q 011416 320 LMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ------------------- 380 (486)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~------------------- 380 (486)
+..+++++..++|++.+..-++.++..++..++.+|..|-+++..+.++++++.+++.+.+
T Consensus 29 iErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~ 108 (539)
T PF03137_consen 29 IERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSS 108 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccc
Confidence 4567899999999999999999999999999999998888899999999999888776410
Q ss_pred -------------------------------hhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHH
Q 011416 381 -------------------------------SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRI 429 (486)
Q Consensus 381 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 429 (486)
....+++..++.|++....++...+++-|.++++..+...|+..+...+
T Consensus 109 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 109 ISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp -------------------------------------------SSS----------------------------------
T ss_pred cccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 0123345556777888888899999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHh---------------------hc-cchHHHHHHHHHHHHHHHHhccccc
Q 011416 430 GGMVCPLVAVALVAN---------------------CH-QMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 430 g~~~~~~i~g~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
|-++|-.+++...+. .| |+..|++.+.+.++.++....+.|+
T Consensus 189 GPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 189 GPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp ----------------------------------------------------------------
T ss_pred cHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 888887777665532 11 5666777777777777777666543
No 278
>PRK03612 spermidine synthase; Provisional
Probab=97.18 E-value=0.048 Score=53.49 Aligned_cols=139 Identities=15% Similarity=0.048 Sum_probs=77.8
Q ss_pred CCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHH---HHHHHHH----hhh-chhHHHHHHHHHHHHhh
Q 011416 325 HPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLS---CLFLLPL----VTY-QSNILTTGLLFGARMCV 396 (486)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~---~~~~~~~----~~~-~~~~~~~~~~~~~~~~~ 396 (486)
|.+....+...+.+-.+..+|+.+++++.++..++... +-..+. .++..++ .+. ..........++.++..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA-VELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666667777777777777777777765433222221 111111 1111111 111 11122233444556677
Q ss_pred hhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH-hhccchHHHHHHHHHHHHHHHH
Q 011416 397 MGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA-NCHQMTAVVLLVVVIVTSILSV 465 (486)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~-~~g~~~~~~~~~~~~~~~~~~~ 465 (486)
|...|...-+..+... +..+...|-......+|+++|+++.+.+.- ..|.....++.+.+.++++++.
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 7777766665544322 234667788889999999999999887654 6776666666666555554433
No 279
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.10 E-value=0.0036 Score=62.12 Aligned_cols=153 Identities=11% Similarity=0.022 Sum_probs=121.9
Q ss_pred cccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-------------------h
Q 011416 321 MFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQ-------------------S 381 (486)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 381 (486)
..+++.+..+.|++....-++..+......+...|..|-+++.++.++++++.++..+.+ +
T Consensus 124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~ 203 (735)
T KOG3626|consen 124 ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENP 203 (735)
T ss_pred hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCC
Confidence 456788889999999999999999999999999999999999999999988888776410 0
Q ss_pred --------------------------------h-HHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHH
Q 011416 382 --------------------------------N-ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGR 428 (486)
Q Consensus 382 --------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 428 (486)
. ..++...++.|++....++...+++-|...++......|+..++..
T Consensus 204 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~ 283 (735)
T KOG3626|consen 204 SSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAI 283 (735)
T ss_pred ccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHH
Confidence 1 1344556677888888889999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhh------------------c-cchHHHHHHHHHHHHHHHHhccccccc
Q 011416 429 IGGMVCPLVAVALVANC------------------H-QMTAVVLLVVVIVTSILSVMLIPFETK 473 (486)
Q Consensus 429 ~g~~~~~~i~g~l~~~~------------------g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (486)
+|-++|-.+++.+...+ | |+..|++.+.+.++.++..+.+.++.+
T Consensus 284 lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 284 LGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred hhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 88888888877766431 1 566777888888888888877765443
No 280
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.03 E-value=0.011 Score=55.91 Aligned_cols=147 Identities=14% Similarity=0.022 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhh
Q 011416 25 FVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAG 104 (486)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 104 (486)
.-++...++..+-++....++.....+...-|+++..+|..-+...+....+.....++.+|+|..|.-.++........
T Consensus 258 q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 258 QPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred CHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 34556666666666766666666667777779999999999999999999999999999999999888777766444333
Q ss_pred hhhh---cC---C----CHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 105 LLSS---FS---P----NYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII 171 (486)
Q Consensus 105 ~~~~---~a---~----~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l 171 (486)
.++. ++ + +...++.+-.+.=+|.=.+ .....++.|..|+++||...|.-.+..++-.++...++-.+
T Consensus 338 ~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 338 ALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3222 22 2 2233333334443443234 55667888999999999999999999998888877666544
No 281
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.92 E-value=0.013 Score=54.56 Aligned_cols=140 Identities=12% Similarity=-0.003 Sum_probs=89.5
Q ss_pred HHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHH---hhhh
Q 011416 30 AGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAG---AGLL 106 (486)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~---~~~~ 106 (486)
+.+.++..+.....+.+.+. ...++.-..++.-+...+|.+|-.++.--...+ |+.+-+++.+-.++..+ ....
T Consensus 252 L~lVY~aEY~InqGv~~tl~-fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~ 328 (402)
T PF02487_consen 252 LFLVYFAEYFINQGVAPTLL-FPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSW 328 (402)
T ss_pred HHHHHHHHHHHHhchHHHhc-CCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHH
Confidence 44555555544333332221 112233345677888888888877765432222 34232332222222222 2223
Q ss_pred hhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 107 SSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM 172 (486)
Q Consensus 107 ~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~ 172 (486)
.-+.+|.|..++.-+..|+..|.. ......+.|-.++++|..++|....+-++|..++.+++-.+-
T Consensus 329 ~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 329 YRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345689999999999999998888 445577788889999999999999999999999998887663
No 282
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.92 E-value=0.0058 Score=57.57 Aligned_cols=111 Identities=12% Similarity=-0.074 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHhh---hc------hhHHHHHHHHHHHHhhhhhhhhHhhhcccccccc---chhhHhHHHHHHH
Q 011416 360 LSITIMFTLSCLFLLPLVT---YQ------SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS---VRSTGAGAANAMG 427 (486)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~ 427 (486)
+.+.++.++..++.+++.. .. ....+.+.+.+.+++.++.=|...++..|.++++ .+...+..+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 4566777777777777443 11 1246777788889999999999999999998765 4567777888999
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhcccc
Q 011416 428 RIGGMVCPLVAVALVANCHQMTAVVLLVVVIVTSILSVMLIPF 470 (486)
Q Consensus 428 ~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 470 (486)
++|..+++.+.+++.++.+|...|.+.++..+++.+..+.-.+
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999988888888777666543
No 283
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.82 E-value=0.078 Score=49.53 Aligned_cols=145 Identities=12% Similarity=0.068 Sum_probs=99.2
Q ss_pred CCCCCchhHHHHHHHHh-hHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhh
Q 011416 324 HHPQDANLYIDEFITSL-AEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTV 402 (486)
Q Consensus 324 ~~~~~~~~~~~~~~~~i-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (486)
++++..+..--..+.+. ..++..+....+.|.++.|++++.+.+...+...++.+.++...+.+.-++.|.+... -..
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-eva 113 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVA 113 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHH
Confidence 45555544332222222 2233445777899999999999999998888888888888888888888888777544 566
Q ss_pred HhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc--cchHHHHHHHHHHHHHHHHhccc
Q 011416 403 SLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH--QMTAVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 469 (486)
.++++-...++++--++.+...+..-+|.+++..++-.+.+..+ +.....+..+...++.+..++++
T Consensus 114 y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 114 YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 67777777888888888999999988888888888766665333 33333344444444445544443
No 284
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.67 E-value=0.29 Score=47.46 Aligned_cols=153 Identities=14% Similarity=0.007 Sum_probs=91.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHh-hHHHHHHHHHHHHHHhc
Q 011416 279 SKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSL-AEIPGLLLAAILVDTAG 357 (486)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~g~l~dr~g 357 (486)
+..++.++.+.+.+++..+.+...-..-..+. .. ...++.+..+-....+ +.++...+-.+++++++
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lv----------vt--~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s 87 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILRDLKDTLV----------VT--AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLS 87 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEE----------Ee--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34456677777777766666554443333222 11 1233333333222222 33455567789999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhh---------hch----------------------hHHHHHHHHHHHHhhhhhhh-hHhh
Q 011416 358 RKLSITIMFTLSCLFLLPLVT---------YQS----------------------NILTTGLLFGARMCVMGAFT-VSLI 405 (486)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~---------~~~----------------------~~~~~~~~~~~~~~~~~~~~-~~~~ 405 (486)
+.++.-+........+.++++ .++ .|...+..+..-.......+ ..|.
T Consensus 88 ~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~ 167 (491)
T PF03219_consen 88 REKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWG 167 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998776554444443333322 111 12222222222222233334 5799
Q ss_pred hccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 406 YAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVA 443 (486)
Q Consensus 406 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~ 443 (486)
+++|..+.++..+.+++....+++|..+++.+..++.+
T Consensus 168 fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 168 FANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888877
No 285
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.65 E-value=0.023 Score=39.66 Aligned_cols=63 Identities=16% Similarity=-0.012 Sum_probs=56.1
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHH
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNIL 384 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (486)
++.+++..+.++..+...++.++|.+...++.++.++++.+..+.+...+..+.+.+.++.+.
T Consensus 20 ~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 20 ADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 567899999999999999999999999999999988899999999999999888887666543
No 286
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.59 E-value=0.5 Score=42.26 Aligned_cols=70 Identities=14% Similarity=0.173 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhcc
Q 011416 69 VFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLE 139 (486)
Q Consensus 69 ~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~ 139 (486)
..+....++++.+.+..++|-|+++.++......... .-+-+.|..++-.-...|++.+.. ..--+|+++
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~ 137 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTP 137 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecH
Confidence 3455566667777999999999999998877665433 223367888999999999998876 333345443
No 287
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.56 E-value=0.63 Score=44.24 Aligned_cols=152 Identities=14% Similarity=0.047 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHh-hHHHHHHHHHHHHHHhchh
Q 011416 281 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSL-AEIPGLLLAAILVDTAGRK 359 (486)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~g~l~dr~g~~ 359 (486)
-++.++...+.+++..+.+...-..-..+.- -...++.+...-...-+ ++++..++-.++.+++.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv------------~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~ 92 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLRSLKDSLVV------------TRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTRE 92 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhheEe------------ecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHH
Confidence 4566677777777777766655544443330 12344444444444444 4566777888999999998
Q ss_pred HHHHHHHHHHHHHHHHHhh--h-------ch-----------------------hHHHHHHHHHHHHhhhhhhh-hHhhh
Q 011416 360 LSITIMFTLSCLFLLPLVT--Y-------QS-----------------------NILTTGLLFGARMCVMGAFT-VSLIY 406 (486)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~--~-------~~-----------------------~~~~~~~~~~~~~~~~~~~~-~~~~~ 406 (486)
++..+.......+++++++ . ++ .|.......+.-.......+ ..+..
T Consensus 93 ~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~f 172 (509)
T COG3202 93 KVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQF 172 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776555444444444332 0 11 12333333333333333333 67889
Q ss_pred ccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 407 AAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVAN 444 (486)
Q Consensus 407 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~ 444 (486)
++|....++..+.+++.+...+++..++..+..++.++
T Consensus 173 aNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 173 ANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999998888763
No 288
>PRK03612 spermidine synthase; Provisional
Probab=96.47 E-value=0.084 Score=51.83 Aligned_cols=138 Identities=15% Similarity=0.132 Sum_probs=80.9
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHH---HHHhhhhh----hcCCCH-HHHHHHHHHH
Q 011416 52 KSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALV---TAGAGLLS----SFSPNY-ITLITLRCLV 123 (486)
Q Consensus 52 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~---~~~~~~~~----~~a~~~-~~l~~~r~l~ 123 (486)
..-+|-+..+.+.+.+++.+|..+|+.+++++.++--++.. .+-+.+ .+++..+. .+...+ ..++...++.
T Consensus 42 ~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 42 SYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34468888899999999999999999999988744333322 111111 11111111 111111 1123334556
Q ss_pred HhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCcHHHHHHhHHHHHHH
Q 011416 124 GVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIM-PRLDWRWLLGLSSIPSFIL 191 (486)
Q Consensus 124 G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~-~~~~w~~~f~~~~~~~~~~ 191 (486)
|+..|.. |....+..+. ..++-++..|-......+|.++|.++.+++. ..+|-....++.+.+.++.
T Consensus 121 ~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~ 189 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLA 189 (521)
T ss_pred HHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 6766666 5544444332 2234567788888999999999998877654 4677555554555544443
No 289
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.14 E-value=0.0017 Score=59.25 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=3.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHh-------------hhchhHHHHHHHHHHHHhhhh
Q 011416 333 IDEFITSLAEIPGLLLAAILVDTA-GRKLSITIMFTLSCLFLLPLV-------------TYQSNILTTGLLFGARMCVMG 398 (486)
Q Consensus 333 ~~~~~~~i~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 398 (486)
.....++++..+|+.+.++..-+. ++|++. +..+.-.+..-++. ..++.+..++..+++++..|.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 456678999999999888753221 233333 22222221111111 123445667778888999999
Q ss_pred hhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHH
Q 011416 399 AFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVA 438 (486)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~ 438 (486)
..+..+.+..+..++++|..+-.+....-.+|-.+|..+.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888877776666667776666553
No 290
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.02 E-value=0.43 Score=45.51 Aligned_cols=135 Identities=16% Similarity=0.226 Sum_probs=88.9
Q ss_pred HHHHHhhHhhhhchhchh---hhhcCCCcchh-HHHHHHHHHHHHHHHHHHhhhhh---hhcchHHHHHHHHHHHHhhhh
Q 011416 34 WVAEAMEIMILSFVGPTV---KSEWNLSSTEE-SLITTSVFAGLVVGAYAWGLVAD---NYGRRMGFLGEALVTAGAGLL 106 (486)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~-g~~~s~~~~~~~i~~~~~g~l~d---r~G~r~~~~~~~~~~~~~~~~ 106 (486)
.+..+..+..+....|.- ....+.+.... +...-...++..+++.+.+.+.+ |+|+++.+.++..+..++.++
T Consensus 249 f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~l 328 (461)
T KOG3098|consen 249 FFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLL 328 (461)
T ss_pred HHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHH
Confidence 344444444444444432 22333333332 33333445566666677777775 578999999998888888776
Q ss_pred hhcC------------------CCHHHHHHHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011416 107 SSFS------------------PNYITLITLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIG 167 (486)
Q Consensus 107 ~~~a------------------~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l 167 (486)
.-.. +++...++.-++.|++-+.. ...+..+.+.+ +++|..+.++...-.+++..++...
T Consensus 329 i~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 329 IHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 6443 14667777889999999888 66777788877 7888889988888888877776554
Q ss_pred HH
Q 011416 168 AW 169 (486)
Q Consensus 168 ~~ 169 (486)
..
T Consensus 408 ~~ 409 (461)
T KOG3098|consen 408 SP 409 (461)
T ss_pred hh
Confidence 44
No 291
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.96 E-value=0.0095 Score=55.34 Aligned_cols=118 Identities=11% Similarity=-0.057 Sum_probs=81.4
Q ss_pred ccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH----hchhHHH-HHHHHHHHHHHHHHhhhchh--------------
Q 011416 322 FSHHPQDANLYIDEFITSLAEIPGLLLAAILVDT----AGRKLSI-TIMFTLSCLFLLPLVTYQSN-------------- 382 (486)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr----~g~~~~~-~~~~~~~~~~~~~~~~~~~~-------------- 382 (486)
...|.+....+.......+.+++.+++.|..+|| +|||+.. ..+.....++++++.+....
T Consensus 60 ~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~ 139 (498)
T KOG0637|consen 60 QSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKP 139 (498)
T ss_pred HHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccch
Confidence 4567777777788888888899999999999996 6776655 45555566666665542110
Q ss_pred ---HHHHHHHHHHHHhhhhhhhhHhhhccccccccchhh-HhHHHHHHHHHHHHHHHHHHH
Q 011416 383 ---ILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRST-GAGAANAMGRIGGMVCPLVAV 439 (486)
Q Consensus 383 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~g~~~~~~i~g 439 (486)
...++...+.=++........-++..|...++.+.+ +++....+..+|+.+|=.+.+
T Consensus 140 rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 140 RAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 112222223334555677788889999887777777 899888888888887766554
No 292
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.70 E-value=0.69 Score=45.96 Aligned_cols=145 Identities=19% Similarity=0.095 Sum_probs=102.3
Q ss_pred CCCCCchhHHHHHHHHhhHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHhhh-------c---------------
Q 011416 324 HHPQDANLYIDEFITSLAEIPGLLLAAILVDT-AGRKLSITIMFTLSCLFLLPLVTY-------Q--------------- 380 (486)
Q Consensus 324 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~-------~--------------- 380 (486)
.+.+...+.-.............+++++++|. +||-+.+.++.++..++..++... +
T Consensus 68 ~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~ 147 (571)
T KOG1237|consen 68 LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESP 147 (571)
T ss_pred hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCc
Confidence 34555666666666666677777899999997 588888888888877776554431 0
Q ss_pred h---hHHHHHHHHHHHHhhhhhhhhHhhhcccccc---c-cc--hhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHH
Q 011416 381 S---NILTTGLLFGARMCVMGAFTVSLIYAAEIYP---T-SV--RSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAV 451 (486)
Q Consensus 381 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~--~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~ 451 (486)
+ ...+...+.+..++.++.-|...++-.|-++ + +. +...+.......++|..++-.+..++.++.+|...|
T Consensus 148 s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf 227 (571)
T KOG1237|consen 148 SKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGF 227 (571)
T ss_pred chHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeec
Confidence 0 0134444555666778888888888888887 2 22 235566677778899999999888888889998888
Q ss_pred HHHHHHHHHHHHHHhcc
Q 011416 452 VLLVVVIVTSILSVMLI 468 (486)
Q Consensus 452 ~~~~~~~~~~~~~~~~~ 468 (486)
.+..+...++.++.+..
T Consensus 228 ~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 228 GIPTVLNALAILIFLPG 244 (571)
T ss_pred cHHHHHHHHHHHHHHcC
Confidence 88877777766655443
No 293
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.52 E-value=0.63 Score=42.46 Aligned_cols=164 Identities=9% Similarity=-0.010 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhhhhcCCCc-chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH----
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSS-TEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTA---- 101 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~---- 101 (486)
.+.+.+++++.....-++.+.......+++-+. ...+.-...-.....+..++.|...|+..|+|++...+.+-=
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~ 108 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVI 108 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHH
Confidence 345567778877777777777777777776543 333333334445567778889999999999999887655432
Q ss_pred --HhhhhhhcC------CCHHHHHHHHHHHHhccCcc---hhhhhhh--cccc----CCCchhHHH---HHHHHHHHHHH
Q 011416 102 --GAGLLSSFS------PNYITLITLRCLVGVGLGSG---HVFLSWF--LEFV----PPSNRGMWM---VIFSSFWTIGS 161 (486)
Q Consensus 102 --~~~~~~~~a------~~~~~l~~~r~l~G~~~~~~---~~~~~~i--~~~~----~~~~r~~~~---~~~~~~~~~G~ 161 (486)
.+.++..+. .++..+..+-++.-.-.+.. ..+.+.+ .||. ..+.+.... +.....-..-.
T Consensus 109 vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 109 VAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 223333333 24555554444433222221 1111222 1443 344455444 55555566677
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHhHHHHHH
Q 011416 162 VSEAIGAWIIMPRLDWRWLLGLSSIPSFI 190 (486)
Q Consensus 162 ~i~~~l~~~l~~~~~w~~~f~~~~~~~~~ 190 (486)
.+.|.+.+.+....+-|..-...++-+++
T Consensus 189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeechhhhhhhhHHHHHH
Confidence 88999999988888877755555554444
No 294
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.70 E-value=0.66 Score=44.55 Aligned_cols=108 Identities=15% Similarity=0.031 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcch-HHHHHHHHHHH---Hhhhhhh---------cCCCHHHHHHHHHHHHhccCc
Q 011416 63 SLITTSVFAGLVVGAYAWGLVADNYGRR-MGFLGEALVTA---GAGLLSS---------FSPNYITLITLRCLVGVGLGS 129 (486)
Q Consensus 63 g~~~s~~~~~~~i~~~~~g~l~dr~G~r-~~~~~~~~~~~---~~~~~~~---------~a~~~~~l~~~r~l~G~~~~~ 129 (486)
-.+...|.++-.+|..+..+.. .-++| +.+.+..+.-. --.++|. +-+|-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4556777788888777554331 11222 12322222222 1222222 224566677789999999998
Q ss_pred c-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 130 G-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII 171 (486)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l 171 (486)
. .....+..+..+++||..+..+...+..+|..+|..++-.+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 66667777888999999999999999999999988876554
No 295
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.49 E-value=0.29 Score=42.35 Aligned_cols=154 Identities=11% Similarity=-0.043 Sum_probs=85.5
Q ss_pred cccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhh
Q 011416 321 MFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAF 400 (486)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (486)
...+++...+++.++.......++...+.|-++||-|||+.-+.-.+...++++.= ..+..-.+.+.-.+.|+.....+
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK-hSpqYkVLmVGR~LGGiaTsLLF 142 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK-HSPQYKVLMVGRVLGGIATSLLF 142 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh-cCCceEEEeehhhhhhHHHHHHH
Confidence 34567888888888877777777788899999999999986544333333333221 12233334444455556555555
Q ss_pred hhHhhh-ccccc-----cccchhhHhHHHHHHH-HHHHHHHHHHHHHHHHhhc--cchHHHHHHHHHHHHHHHHhccccc
Q 011416 401 TVSLIY-AAEIY-----PTSVRSTGAGAANAMG-RIGGMVCPLVAVALVANCH--QMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 401 ~~~~~~-~~~~~-----~~~~~~~~~g~~~~~~-~~g~~~~~~i~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
+..-++ +.|.. |.+-.....+=...++ .+-.+++......+.|..+ .-.+|-..+.+..++..+.+--..|
T Consensus 143 SaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~E 222 (454)
T KOG4332|consen 143 SAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSE 222 (454)
T ss_pred HHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhh
Confidence 554433 44443 3333333333333232 3556666666666677654 4555655555555555444433334
Q ss_pred ccCC
Q 011416 472 TKGQ 475 (486)
Q Consensus 472 ~~~~ 475 (486)
.-++
T Consensus 223 Nygd 226 (454)
T KOG4332|consen 223 NYGD 226 (454)
T ss_pred ccCC
Confidence 4343
No 296
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.11 E-value=2.2 Score=39.35 Aligned_cols=142 Identities=18% Similarity=0.045 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHH-----Hhc
Q 011416 283 RTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVD-----TAG 357 (486)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d-----r~g 357 (486)
+.++.+.+++..+.+..-... -.|.+. +..+.|-.+.+.......= ..-.+++..++| |+|
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL-----------~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~G 96 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLL-----------QAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFG 96 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHh-----------cCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhc
Confidence 455555666665555443333 455444 2334555544443322211 122356777777 899
Q ss_pred hhHHHH-HHHHHHHHHHHHHhhhc-----------hhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHH
Q 011416 358 RKLSIT-IMFTLSCLFLLPLVTYQ-----------SNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANA 425 (486)
Q Consensus 358 ~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 425 (486)
||+..+ -+..+.+..+..+.... +.......+++.-+....--...-.+......+++.|-++.....
T Consensus 97 rrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~V 176 (510)
T KOG3574|consen 97 RRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSV 176 (510)
T ss_pred cccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHH
Confidence 887543 34444444444444311 111111122222232222223444555556666666665554444
Q ss_pred HHHHHHHHHHHHH
Q 011416 426 MGRIGGMVCPLVA 438 (486)
Q Consensus 426 ~~~~g~~~~~~i~ 438 (486)
..+.|.+++..+.
T Consensus 177 g~~~GyfL~~~if 189 (510)
T KOG3574|consen 177 GQTAGYFLGNVVF 189 (510)
T ss_pred HHhhhHHhhccee
Confidence 4556666655443
No 297
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.40 E-value=11 Score=35.31 Aligned_cols=37 Identities=8% Similarity=-0.050 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhH
Q 011416 384 LTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAG 421 (486)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 421 (486)
.......+.+.+.+......+...++ +|+++....++
T Consensus 119 vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~ 155 (406)
T KOG1479|consen 119 VTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMS 155 (406)
T ss_pred HHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHh
Confidence 33444445555555555555555544 56665544433
No 298
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.11 E-value=0.25 Score=42.38 Aligned_cols=64 Identities=16% Similarity=0.131 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhh---------hhhhcchHH
Q 011416 29 YAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLV---------ADNYGRRMG 92 (486)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l---------~dr~G~r~~ 92 (486)
....+.+.+-....++-..+-.+.++.|+++.....+.-+..+.-++..++.|.. .||+|||+.
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 3445666766666666666666778889999888888888899999998888754 469999874
No 299
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=84.49 E-value=29 Score=31.98 Aligned_cols=75 Identities=13% Similarity=0.110 Sum_probs=37.3
Q ss_pred hhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHH
Q 011416 275 MLFSSKLARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVD 354 (486)
Q Consensus 275 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~d 354 (486)
++.+.+..+..+.++.+|+.....+.....+.+ .+...+..+..++..+.-..+.+ .|
T Consensus 152 ~~t~~~~ak~sl~fc~lWF~anl~~naALa~Ts--------------------VAS~TilSStSs~FtL~la~if~--~e 209 (416)
T KOG2765|consen 152 KLTATQTAKLSLFFCPLWFLANLTSNAALAFTS--------------------VASTTILSSTSSFFTLFLAAIFP--VE 209 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--------------------hhhhhhhhhcchHHHHHHHHHcC--cc
Confidence 344444555556666677665555544333322 11122233333333333333444 88
Q ss_pred HhchhHHHHHHHHHHHH
Q 011416 355 TAGRKLSITIMFTLSCL 371 (486)
Q Consensus 355 r~g~~~~~~~~~~~~~~ 371 (486)
|+...+++.+..-+.++
T Consensus 210 ~ft~sKllav~~si~GV 226 (416)
T KOG2765|consen 210 RFTLSKLLAVFVSIAGV 226 (416)
T ss_pred hhhHHHHHHHHHhhccE
Confidence 99888887654444433
No 300
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=84.24 E-value=29 Score=32.28 Aligned_cols=134 Identities=10% Similarity=0.038 Sum_probs=67.3
Q ss_pred CCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHH-------HHHHHHHhhhc-----hhHHHHHHHHHHHH
Q 011416 327 QDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLS-------CLFLLPLVTYQ-----SNILTTGLLFGARM 394 (486)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~~~~~~ 394 (486)
+-...+....+-+....+...+.|...|+..|++++.....+. +...+.+...+ +......++.+...
T Consensus 61 sl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~ 140 (503)
T KOG2601|consen 61 SLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANL 140 (503)
T ss_pred eehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHH
Confidence 3344455555556666777778888899999988776544332 22222222221 22222222222111
Q ss_pred -h-hhhhhhhHhhhcc---------ccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Q 011416 395 -C-VMGAFTVSLIYAA---------EIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAVVLLVVVIVT 460 (486)
Q Consensus 395 -~-~~~~~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~ 460 (486)
+ .+-.......+.. |-=++.......+.....-.....+.|.+.|.+.+..+.......+++..++
T Consensus 141 i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 141 IAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred HHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 1 1111111111111 2112222333345555566678889999999988876655544455554444
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.20 E-value=8 Score=28.09 Aligned_cols=39 Identities=10% Similarity=0.011 Sum_probs=30.7
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccchHH
Q 011416 413 TSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQMTAV 451 (486)
Q Consensus 413 ~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~ 451 (486)
++.++.+.++-...-.+++++.....||+.|++-...++
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 455788888888888899999999999999987544443
No 302
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=80.61 E-value=4.9 Score=35.95 Aligned_cols=142 Identities=16% Similarity=0.043 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHhhHhhhhchh--chhhhhcCCCc-chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHH---HHHHHHHH
Q 011416 27 LAYAGLGWVAEAMEIMILSFVG--PTVKSEWNLSS-TEESLITTSVFAGLVVGAYAWGLVADNYGRRMG---FLGEALVT 100 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~-~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~---~~~~~~~~ 100 (486)
++-++..++..++-...+...+ |- .+.+.++. .|.-|....|.+|-.++.--.-..--+ .-+. +-.-.+++
T Consensus 253 MvPL~~VY~~EY~INQGl~ell~F~c-~~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p--~l~~LailQ~vNl~f 329 (409)
T KOG3880|consen 253 MVPLALVYFAEYFINQGLAELLLFPC-SHGFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMP--YLWLLAILQFVNLLF 329 (409)
T ss_pred HHHHHHHHHHHHHHhhhhHhhEEecc-ccCCccchhhcchhhheeeeeeEEEEeccceEEech--HHHHHHHHHHHHHHH
Confidence 3444555666555443333221 21 34444443 357788888887655443221111111 1111 22233445
Q ss_pred HHhhhhhhcCCCHHHHHHHHHHHHhccCcchh-hhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 101 AGAGLLSSFSPNYITLITLRCLVGVGLGSGHV-FLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII 171 (486)
Q Consensus 101 ~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l 171 (486)
.+......+.++++..++.-+.-|+-.|..++ ..--+.+-.+|++|-.+++....+-++|..++..++-.+
T Consensus 330 f~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 330 FLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 55566778899999999999999998777744 344566667889999999999999999999988877665
No 303
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=80.16 E-value=29 Score=34.43 Aligned_cols=27 Identities=4% Similarity=-0.288 Sum_probs=14.0
Q ss_pred HhhhchhhHHHHHHHHHHHHHHHHHHH
Q 011416 274 LMLFSSKLARTTILLWLLLFGNSFAYY 300 (486)
Q Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~~~~~~ 300 (486)
.|++|++....++..++....+.+...
T Consensus 252 gDVFR~P~~~~lls~lvG~G~Qll~~~ 278 (521)
T PF02990_consen 252 GDVFRPPKHPMLLSALVGTGIQLLFMA 278 (521)
T ss_pred HHHhcCcCCchHHHhHhcchhhhhHHH
Confidence 466777665555554444444433333
No 304
>PRK10263 DNA translocase FtsK; Provisional
Probab=79.46 E-value=50 Score=36.25 Aligned_cols=26 Identities=31% Similarity=0.319 Sum_probs=16.1
Q ss_pred HHHhhHHHHHHHHHHHHHHhchhHHH
Q 011416 337 ITSLAEIPGLLLAAILVDTAGRKLSI 362 (486)
Q Consensus 337 ~~~i~~~~~~~~~g~l~dr~g~~~~~ 362 (486)
+.+.++.+|..+...+..-+|.--.+
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~AYL 85 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVMAYT 85 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHHHHH
Confidence 34566677777777776666754333
No 305
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=79.33 E-value=0.67 Score=42.33 Aligned_cols=106 Identities=16% Similarity=0.109 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHh---hhhh----------hcCCCHHHHHHHHHHHHhccCc
Q 011416 64 LITTSVFAGLVVGAYAWGLVADN-YGRRMGFLGEALVTAGA---GLLS----------SFSPNYITLITLRCLVGVGLGS 129 (486)
Q Consensus 64 ~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~~~~~~~~~~~~---~~~~----------~~a~~~~~l~~~r~l~G~~~~~ 129 (486)
.+...|.++-.+|....++.--+ -.+|++.. ..+.-.+. .++| .+.+|-+..++..++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 35667888888888877764211 13444443 32222211 1122 1223556677788999999998
Q ss_pred c-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 130 G-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWI 170 (486)
Q Consensus 130 ~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 170 (486)
. ...+.+..+..++++|..+-.+...+..+|..+|..++..
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 6777788888999999999888888888888888776644
No 306
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=79.03 E-value=53 Score=30.26 Aligned_cols=81 Identities=9% Similarity=0.011 Sum_probs=45.1
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHH-HhhccchHHHHHHHHH
Q 011416 380 QSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALV-ANCHQMTAVVLLVVVI 458 (486)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~-~~~g~~~~~~~~~~~~ 458 (486)
.+.+.+.....++|...+.=.|..+.+..... +......+.....-++|+..+..+...+. -..|....-...+.+.
T Consensus 103 ~~~~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~N 180 (508)
T COG4262 103 PSRLVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCN 180 (508)
T ss_pred hHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHH
Confidence 35566777778888888888888888877622 11122222233335677666666665543 2344333334444444
Q ss_pred HHHH
Q 011416 459 VTSI 462 (486)
Q Consensus 459 ~~~~ 462 (486)
++++
T Consensus 181 l~aA 184 (508)
T COG4262 181 LAAA 184 (508)
T ss_pred HHHH
Confidence 4444
No 307
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=79.01 E-value=34 Score=30.06 Aligned_cols=91 Identities=19% Similarity=0.210 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhh-hhcchHHHH----HHHHHHHHhhhhh-hcCC----CHHHHHHHHHHHHhcc-Ccchhh
Q 011416 65 ITTSVFAGLVVGAYAWGLVAD-NYGRRMGFL----GEALVTAGAGLLS-SFSP----NYITLITLRCLVGVGL-GSGHVF 133 (486)
Q Consensus 65 ~~s~~~~~~~i~~~~~g~l~d-r~G~r~~~~----~~~~~~~~~~~~~-~~a~----~~~~l~~~r~l~G~~~-~~~~~~ 133 (486)
..-++..|+.++....|+... ++.||+.+. .+.++..++.++. .+.. ++..+++.-|+.|++. |..++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 344455566666677777766 356666544 3455555555543 2222 3566777888888765 333332
Q ss_pred h--hhhccccCCCchhHHHHHHHH
Q 011416 134 L--SWFLEFVPPSNRGMWMVIFSS 155 (486)
Q Consensus 134 ~--~~i~~~~~~~~r~~~~~~~~~ 155 (486)
. +.=-....|++-|...|+.-.
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWG 249 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWG 249 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHH
Confidence 2 122233455666655554433
No 308
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.45 E-value=7 Score=28.37 Aligned_cols=39 Identities=18% Similarity=0.124 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh-cchHHHHHHHHHHH
Q 011416 63 SLITTSVFAGLVVGAYAWGLVADNY-GRRMGFLGEALVTA 101 (486)
Q Consensus 63 g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~~~~~~~~~~ 101 (486)
+.-.++-+++..+.....|++.||| |.+++.++...+.+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 4445566677777778889999997 66666555444433
No 309
>COG1288 Predicted membrane protein [Function unknown]
Probab=77.89 E-value=43 Score=31.68 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHH-HhcCCCcHHHHHHhHHHHHHHHHHh--hccCCCch
Q 011416 159 IGSVSEAIGAWI-IMPRLDWRWLLGLSSIPSFILLAFL--GFQPESPR 203 (486)
Q Consensus 159 ~G~~i~~~l~~~-l~~~~~w~~~f~~~~~~~~~~~~~~--~~~~e~~~ 203 (486)
.+..++.-+++. +.+..+||...++......+..+.+ ..++++|.
T Consensus 199 F~~~IAq~iAGip~~sG~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~ 246 (481)
T COG1288 199 FATVIAQNIAGIPFLSGMGLRIVVWVVFTLISIIYVYWYASKVKKDPT 246 (481)
T ss_pred hHHHHHhhhcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 334444444332 4566789999888766555543332 22455554
No 310
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=74.81 E-value=52 Score=27.93 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=20.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 011416 143 PSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRW 179 (486)
Q Consensus 143 ~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~ 179 (486)
++++.+.-.......-++..+|..++..+.+..+.+.
T Consensus 157 ~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~a 193 (209)
T PF06912_consen 157 GKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWA 193 (209)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3443333344445555566666666777666666533
No 311
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=70.19 E-value=22 Score=32.76 Aligned_cols=108 Identities=13% Similarity=0.017 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcch--HHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhcc
Q 011416 63 SLITTSVFAGLVVGAYAWGLVADNYGRR--MGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLE 139 (486)
Q Consensus 63 g~~~s~~~~~~~i~~~~~g~l~dr~G~r--~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~ 139 (486)
|..-++..+..+++.+..|.+--++.|. -.+.++.+..+...++++.+++.|..+++.++.+.-.... +++..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 6677788888999999999998887765 3444556666666777888899999888888877776666 777777887
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 011416 140 FVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMP 173 (486)
Q Consensus 140 ~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~ 173 (486)
....+.-|..+|+.... +.++-.++.....+
T Consensus 354 nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred hhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 77778788877776543 33444444444444
No 312
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=69.22 E-value=78 Score=27.61 Aligned_cols=33 Identities=15% Similarity=0.034 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Q 011416 340 LAEIPGLLLAAILVDTAGRKLSITIMFTLSCLF 372 (486)
Q Consensus 340 i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 372 (486)
++..+.-+.+-.++.|+..|++..++.++..+.
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 333344444456777888777776665555444
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=68.49 E-value=36 Score=26.99 Aligned_cols=41 Identities=12% Similarity=0.045 Sum_probs=30.7
Q ss_pred HhhhhhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHH
Q 011416 394 MCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVC 434 (486)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 434 (486)
++..+...+.+.+.+-...++..|...|+-.+-.+++.+.-
T Consensus 106 ~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 106 FFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred HHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 33444556778888888888888999999988888776543
No 314
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=65.47 E-value=8.7 Score=37.08 Aligned_cols=31 Identities=6% Similarity=-0.255 Sum_probs=19.1
Q ss_pred CCCchhHHHHHHHHhhHHHHHHHHHHHHHHh
Q 011416 326 PQDANLYIDEFITSLAEIPGLLLAAILVDTA 356 (486)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~ 356 (486)
.++..-|-+.+..-+.-++.++++|+.+-|+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 4555555556665566666666777766654
No 315
>PRK10263 DNA translocase FtsK; Provisional
Probab=61.53 E-value=49 Score=36.34 Aligned_cols=22 Identities=18% Similarity=0.043 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHhcCCCcHHHH
Q 011416 160 GSVSEAIGAWIIMPRLDWRWLL 181 (486)
Q Consensus 160 G~~i~~~l~~~l~~~~~w~~~f 181 (486)
|+++|..++.++...+|.-...
T Consensus 143 GGIIG~lLs~lL~~LfG~vGa~ 164 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLHSSGGT 164 (1355)
T ss_pred cchHHHHHHHHHHHHHhHHHHH
Confidence 5555555555554444443333
No 316
>COG4769 Predicted membrane protein [Function unknown]
Probab=60.43 E-value=8.3 Score=30.52 Aligned_cols=51 Identities=18% Similarity=0.055 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHh
Q 011416 69 VFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGV 125 (486)
Q Consensus 69 ~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 125 (486)
+.+...+.+...-++..++|+|.+-.+|... .-++.+|..++.+.+++.|-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 4455566666777788899998875555433 23567899999999998764
No 317
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=58.36 E-value=1.6e+02 Score=27.42 Aligned_cols=113 Identities=16% Similarity=0.132 Sum_probs=66.0
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHh----hhhh-hcC----CCHHHHHHHHHHHHh
Q 011416 55 WNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGA----GLLS-SFS----PNYITLITLRCLVGV 125 (486)
Q Consensus 55 ~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~----~~~~-~~a----~~~~~l~~~r~l~G~ 125 (486)
+|-..-|.+.+.+.|.+...+++...-++.|.--.-+.+..-+++..++ .+++ .|+ ++-+.+.+.-++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3556778899999999999999999888877533322222222221111 1111 222 466778888889999
Q ss_pred ccCcc-hhhhhhhcc-ccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 126 GLGSG-HVFLSWFLE-FVPPSNRGMWMVIFSSFWTIGSVSEAIGAWI 170 (486)
Q Consensus 126 ~~~~~-~~~~~~i~~-~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 170 (486)
-.|.- |..+.++.. ...-+. ..+.....-.+|...+.++-.+
T Consensus 118 LVG~EiPL~mrml~~r~a~~k~---~~s~vl~~DYLGal~~gLl~p~ 161 (508)
T COG4262 118 LVGAEIPLLMRMLQRRQAKAKD---LGSRVLTLDYLGALAGGLLWPF 161 (508)
T ss_pred HHhcchHHHHHHHHHHHHHHHh---hhhhhhhhHhhhhhhHHHHHHH
Confidence 88888 777766654 222222 2222223355666666555444
No 318
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=58.15 E-value=1.5e+02 Score=27.26 Aligned_cols=110 Identities=12% Similarity=0.086 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCccccCCCCCchhHHHHHHHHhhHHHHHHHHHHHHHHhchhH
Q 011416 281 LARTTILLWLLLFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKL 360 (486)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~ 360 (486)
..+..+.+..........+.+.......... +...... ......-+..+++.+.+++++|-|+
T Consensus 27 ~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~-------------~lg~~sl----~~~y~~l~~s~m~~~~~Ir~~g~K~ 89 (390)
T KOG3097|consen 27 ILKNVLILSIAFLLTFTAYLGLQNLQTSVNY-------------DLGTVSL----GALYLSLIDSSMFMPLLIRFLGTKW 89 (390)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc-------------Ccccchh----hhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 3344555555555555555565555544331 1222221 2223444556666779999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhcc
Q 011416 361 SITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAA 408 (486)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (486)
.+.++..........= ..+.....+......|++.+..+..--+++.
T Consensus 90 tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT 136 (390)
T KOG3097|consen 90 TMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLT 136 (390)
T ss_pred HHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceec
Confidence 9887665554432221 1223334444555566666655544334433
No 319
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=57.92 E-value=47 Score=21.24 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHHHHHhhccCCCc
Q 011416 156 FWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFILLAFLGFQPESP 202 (486)
Q Consensus 156 ~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~ 202 (486)
+.-+|.+++...+......++++....+..+.+++..++...+|+++
T Consensus 10 s~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34567777777777766678888887777777777666655555543
No 320
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=57.09 E-value=33 Score=25.11 Aligned_cols=52 Identities=13% Similarity=0.099 Sum_probs=43.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC
Q 011416 60 TEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP 111 (486)
Q Consensus 60 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~ 111 (486)
+..|=..++|.-.+.+.++.+++..|+.-+.+.=.+|..+..++..+..+.|
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5667888899999999999999999999988888888888777777666554
No 321
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=56.75 E-value=61 Score=31.63 Aligned_cols=61 Identities=8% Similarity=0.097 Sum_probs=41.5
Q ss_pred HHHHHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Q 011416 118 TLRCLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 118 ~~r~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
+.-++.-+..-.. .+..+.-+...+|.--|+.|.+.+...++|.---..+.-.++|.+.++
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 3344555554444 556688899999999999999999999998654444444444444443
No 322
>PRK02237 hypothetical protein; Provisional
Probab=51.96 E-value=53 Score=24.14 Aligned_cols=52 Identities=13% Similarity=0.031 Sum_probs=42.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC
Q 011416 60 TEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP 111 (486)
Q Consensus 60 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~ 111 (486)
+..|=+.++|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|..+..+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4478888899999999999999999999888877888877777776665554
No 323
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=51.18 E-value=3.1e+02 Score=28.62 Aligned_cols=25 Identities=16% Similarity=0.396 Sum_probs=19.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHh
Q 011416 332 YIDEFITSLAEIPGLLLAAILVDTA 356 (486)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~g~l~dr~ 356 (486)
-+...+..+.+++..++.-.+.||.
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445566777788888999999996
No 324
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=50.83 E-value=90 Score=22.78 Aligned_cols=31 Identities=13% Similarity=0.134 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Q 011416 342 EIPGLLLAAILVDTAGRKLSITIMFTLSCLF 372 (486)
Q Consensus 342 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 372 (486)
.++|.+++-|+-++++......+.+++.+++
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 3444445555555677655554444444433
No 325
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.99 E-value=39 Score=24.76 Aligned_cols=50 Identities=16% Similarity=-0.150 Sum_probs=39.2
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh
Q 011416 329 ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT 378 (486)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 378 (486)
...+-.+..++-.-++.+++.++..|+..+.+.=.++..++.++..++.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 56678888889999999999999999988777666676666666555443
No 326
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=49.84 E-value=2.1e+02 Score=27.06 Aligned_cols=19 Identities=21% Similarity=0.286 Sum_probs=11.7
Q ss_pred HhhHHHHHHHHHHHHHHhc
Q 011416 339 SLAEIPGLLLAAILVDTAG 357 (486)
Q Consensus 339 ~i~~~~~~~~~g~l~dr~g 357 (486)
.+..++..+..|++..|.+
T Consensus 5 ~i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 5 AILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 3445555667777777653
No 327
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=48.49 E-value=2.4e+02 Score=26.60 Aligned_cols=15 Identities=13% Similarity=0.328 Sum_probs=7.7
Q ss_pred HHHHHHHhhhhhhhc
Q 011416 74 VVGAYAWGLVADNYG 88 (486)
Q Consensus 74 ~i~~~~~g~l~dr~G 88 (486)
.+.....|++..|+|
T Consensus 9 i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 9 IFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHhC
Confidence 344445556655553
No 328
>PRK13743 conjugal transfer protein TrbF; Provisional
Probab=47.21 E-value=1.1e+02 Score=23.25 Aligned_cols=63 Identities=14% Similarity=0.046 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhh
Q 011416 22 YQCFVLAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVA 84 (486)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~ 84 (486)
+-+.-++.+..+.++-......+...+.++..+-.+...+.-|=.-.+.+-+.+-++-+|.+.
T Consensus 40 Y~~LfiVFl~AG~vLw~vM~~iFd~CIDsWkAdpeLnn~rymWNilMYaIPy~L~Ala~GFlv 102 (141)
T PRK13743 40 YFDLFIVFLTAGIVLWVIMHSIFDACIDSWKADPELNNFRYMWNILMYVIPYTLWALAAGFLV 102 (141)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcChhhhhHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 333334444444455555566666677777777777667776766667666666666666554
No 329
>PRK02237 hypothetical protein; Provisional
Probab=43.95 E-value=69 Score=23.58 Aligned_cols=49 Identities=14% Similarity=-0.096 Sum_probs=38.3
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh
Q 011416 329 ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLV 377 (486)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 377 (486)
...+-.+..++-.-++.+++.++.+|+..+-+.=.++..++.++..++.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 4478888899999999999999999998876666666666666655543
No 330
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=43.61 E-value=1.9e+02 Score=26.03 Aligned_cols=11 Identities=18% Similarity=-0.233 Sum_probs=4.2
Q ss_pred hhHHHHHHHHH
Q 011416 381 SNILTTGLLFG 391 (486)
Q Consensus 381 ~~~~~~~~~~~ 391 (486)
+++...+.+.+
T Consensus 22 ~~~l~~~~~~~ 32 (284)
T PF12805_consen 22 YPWLLILVLAL 32 (284)
T ss_pred ccHHHHHHHHH
Confidence 33333333333
No 331
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=39.80 E-value=2.8e+02 Score=24.88 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=26.9
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh
Q 011416 329 ANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVT 378 (486)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 378 (486)
.++++-+.+..+.+++-.. -++-||+.|-..+.++....++.....-.
T Consensus 99 leaSLGY~InPL~~VllG~--lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 99 LEASLGYFINPLVNVLLGR--LFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred hHHHhHHHHHHHHHHHHHH--HHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 3444444444444443221 24567888888877777666665554443
No 332
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=39.13 E-value=4.9e+02 Score=27.50 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHH
Q 011416 152 IFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSF 189 (486)
Q Consensus 152 ~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~ 189 (486)
+...+..++.++..+++.++....+|..++++.++++-
T Consensus 105 Ll~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILAP 142 (810)
T TIGR00844 105 LLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcC
Confidence 34444455555555555555556778777776666543
No 333
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=38.49 E-value=72 Score=21.87 Aligned_cols=32 Identities=6% Similarity=0.115 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Q 011416 431 GMVCPLVAVALVANCHQMTAVVLLVVVIVTSILS 464 (486)
Q Consensus 431 ~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 464 (486)
..+.+++.|++.+... .++..+++..++++++
T Consensus 20 ~~iisfi~Gy~~q~~~--~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 20 SAIISFIVGYITQSFS--YTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhh
Confidence 3344566677776643 3444444444444333
No 334
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=38.07 E-value=2.5e+02 Score=23.77 Aligned_cols=67 Identities=15% Similarity=0.023 Sum_probs=33.4
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHhcc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQM-TAVVLLVVVIVTSILSVMLI 468 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~ 468 (486)
|....... ..++++|-+..--......+...+.-+.+.++.+.+|-. ..+-+.+++.+....+-...
T Consensus 22 p~f~~lt~-~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~~ml~ 89 (203)
T PF01914_consen 22 PIFLSLTK-GMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIALEMLF 89 (203)
T ss_pred HHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 33333444 444444444433333444444445555556667777744 44556666655544444443
No 335
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=36.87 E-value=94 Score=25.73 Aligned_cols=22 Identities=23% Similarity=0.600 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhcc
Q 011416 68 SVFAGLVVGAYAWGLVADNYGR 89 (486)
Q Consensus 68 ~~~~~~~i~~~~~g~l~dr~G~ 89 (486)
-|.+++.+++.+.|++.||..+
T Consensus 90 GyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhhhc
Confidence 4778889999999999999875
No 336
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=36.39 E-value=4.1e+02 Score=26.03 Aligned_cols=15 Identities=20% Similarity=0.233 Sum_probs=8.3
Q ss_pred HHHHHHHHhchhHHH
Q 011416 348 LAAILVDTAGRKLSI 362 (486)
Q Consensus 348 ~~g~l~dr~g~~~~~ 362 (486)
....+.+|+++|+..
T Consensus 103 ~v~~l~k~l~~~~~~ 117 (465)
T PF03606_consen 103 LVNLLIKPLKGKKNP 117 (465)
T ss_pred HHHHHHHHhcCCcch
Confidence 344566777655433
No 337
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=34.10 E-value=4.3e+02 Score=25.33 Aligned_cols=27 Identities=11% Similarity=0.074 Sum_probs=15.1
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHhHHHH
Q 011416 162 VSEAIGAWIIMPRLDWRWLLGLSSIPS 188 (486)
Q Consensus 162 ~i~~~l~~~l~~~~~w~~~f~~~~~~~ 188 (486)
....++.+.+.++...+.......+..
T Consensus 112 ~a~~IvsGavaeR~~~~~~~v~~~~~~ 138 (404)
T TIGR03644 112 TAMSIVSGAVAERMKLWPFLLFAVVLT 138 (404)
T ss_pred HHHHHHHhHhhhcccHHHHHHHHHHHH
Confidence 334456677777777665544444433
No 338
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=33.96 E-value=2e+02 Score=21.36 Aligned_cols=21 Identities=14% Similarity=0.309 Sum_probs=12.5
Q ss_pred HHhchhHHHHHHHHHHHHHHH
Q 011416 354 DTAGRKLSITIMFTLSCLFLL 374 (486)
Q Consensus 354 dr~g~~~~~~~~~~~~~~~~~ 374 (486)
+|..+++...+.....++..+
T Consensus 84 er~~~~~~~a~~l~~~Gv~li 104 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIGVILI 104 (113)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 567777777665555544443
No 339
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=33.51 E-value=3e+02 Score=23.29 Aligned_cols=21 Identities=5% Similarity=-0.073 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcc
Q 011416 427 GRIGGMVCPLVAVALVANCHQ 447 (486)
Q Consensus 427 ~~~g~~~~~~i~g~l~~~~g~ 447 (486)
..++-.+|..+.+.+.+..+.
T Consensus 171 ~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 171 IILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 334444455555555666664
No 340
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=33.35 E-value=2.1e+02 Score=24.41 Aligned_cols=87 Identities=16% Similarity=0.033 Sum_probs=48.1
Q ss_pred CCCHHHHHHHHHHHHhccCcc-hhhhhhhc--cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHH
Q 011416 110 SPNYITLITLRCLVGVGLGSG-HVFLSWFL--EFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSI 186 (486)
Q Consensus 110 a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~--~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~ 186 (486)
..+.|.++..-++.|+..... |....+.. |...+.+..+..=....+.++|..++--+.-.+ ++|+.-+++...
T Consensus 59 ~~~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi---~g~~l~~~l~~~ 135 (212)
T PF07556_consen 59 SGSLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRII---FGIPLWYFLIPG 135 (212)
T ss_pred CCCcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHH---hCCcHHHHHHHH
Confidence 457788888889999988887 76664432 444444444444455555555555544444444 466655544333
Q ss_pred HHHHHHHHhhccCC
Q 011416 187 PSFILLAFLGFQPE 200 (486)
Q Consensus 187 ~~~~~~~~~~~~~e 200 (486)
..+ .+++.++.||
T Consensus 136 Y~l-~~~l~~f~p~ 148 (212)
T PF07556_consen 136 YIL-VLILTFFSPE 148 (212)
T ss_pred HHH-HHHHHHhcCH
Confidence 322 3334444443
No 341
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=30.83 E-value=2.1e+02 Score=27.75 Aligned_cols=121 Identities=13% Similarity=0.052 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHhhHhhhhchhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhh
Q 011416 27 LAYAGLGWVAEAMEIMILSFVGPTVKSEWNLSSTEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLL 106 (486)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 106 (486)
.....+-.++..+......|. .+..++|++.+|...+.+.-.+...++.++--....+.|-|-....+.....++.+.
T Consensus 18 ~~~lglQH~lamfg~~V~VPl--ivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i 95 (451)
T COG2233 18 LLLLGLQHLLAMFGATVLVPL--LVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMI 95 (451)
T ss_pred HHHHHHHHHHHHHhcchHhhH--HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHH
Confidence 344445555544433333222 256789999999999999999999999888766444566676666666555555554
Q ss_pred hhcC---CCHHHHHHHHHHHHhccCcchhhhh-hhccccCCCchhHH
Q 011416 107 SSFS---PNYITLITLRCLVGVGLGSGHVFLS-WFLEFVPPSNRGMW 149 (486)
Q Consensus 107 ~~~a---~~~~~l~~~r~l~G~~~~~~~~~~~-~i~~~~~~~~r~~~ 149 (486)
.... +.....+.+-+..|+..-....... ++...+||---|..
T Consensus 96 ~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~V 142 (451)
T COG2233 96 AIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPV 142 (451)
T ss_pred HHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeE
Confidence 4433 2355666666666666555433333 77778887655543
No 342
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=30.58 E-value=1.2e+02 Score=24.04 Aligned_cols=24 Identities=25% Similarity=0.397 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhcchH
Q 011416 68 SVFAGLVVGAYAWGLVADNYGRRM 91 (486)
Q Consensus 68 ~~~~~~~i~~~~~g~l~dr~G~r~ 91 (486)
-|.+++.+...+.|++.+|..+++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhccccc
Confidence 477888999999999999988764
No 343
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=30.26 E-value=5.1e+02 Score=25.05 Aligned_cols=20 Identities=10% Similarity=0.087 Sum_probs=10.5
Q ss_pred hHhhhccccccccchhhHhH
Q 011416 402 VSLIYAAEIYPTSVRSTGAG 421 (486)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~g 421 (486)
....+.........++..++
T Consensus 365 Li~~Y~~~vl~~~k~~~~~~ 384 (430)
T PF06123_consen 365 LISLYLSSVLKSWKRGLIFA 384 (430)
T ss_pred HHHHHHHHHHhcchHHHHHH
Confidence 34444455555555666554
No 344
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=26.99 E-value=82 Score=23.80 Aligned_cols=13 Identities=8% Similarity=-0.097 Sum_probs=9.0
Q ss_pred HHHhhccCCCchh
Q 011416 192 LAFLGFQPESPRY 204 (486)
Q Consensus 192 ~~~~~~~~e~~~~ 204 (486)
+++++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 5567778887754
No 345
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=26.17 E-value=5e+02 Score=23.63 Aligned_cols=94 Identities=11% Similarity=-0.070 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH-h-hhchhHHHHHHHHHHHHhhhhhhhhHhhhccccccccchhhHh
Q 011416 343 IPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPL-V-TYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGA 420 (486)
Q Consensus 343 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (486)
++-.-+++.+++|-|.-++-+=+..+.+...... . ...++|.-+... ...+........+.+.....++--++.
T Consensus 21 LllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl~~a----~l~g~l~~ll~a~~ti~l~~nqiisG~ 96 (304)
T COG1079 21 LLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGLLAA----ALVGALFGLLHAFLTIKLRANQIISGL 96 (304)
T ss_pred HHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHHHHH----HHHHHHHHHHHHHHHHhhccccchhHH
Confidence 3444578899999876554333322222221111 1 134444433333 334445555666666666666666777
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 011416 421 GAANAMGRIGGMVCPLVAVA 440 (486)
Q Consensus 421 g~~~~~~~~g~~~~~~i~g~ 440 (486)
++......+..+++-.+.+.
T Consensus 97 alnl~a~Glt~fl~~~~~~~ 116 (304)
T COG1079 97 ALNLLASGLTAFLGQSIFGQ 116 (304)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 77777767776666666554
No 346
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=25.92 E-value=4.2e+02 Score=24.91 Aligned_cols=29 Identities=7% Similarity=-0.068 Sum_probs=22.0
Q ss_pred hhHhhhhchhchhhhhcCCCcchhHHHHH
Q 011416 39 MEIMILSFVGPTVKSEWNLSSTEESLITT 67 (486)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s 67 (486)
...-.+...+....+++|+++.-.|.+..
T Consensus 236 ~lAe~lv~sIe~~v~~~Glp~afiGvIIa 264 (366)
T PRK10599 236 AVTKMNASPLETLLTSMNAPVAFTGFLVA 264 (366)
T ss_pred HHHHHhHhhHHHHHHhcCCCHHHHHHHHH
Confidence 33455566678888999999999998863
No 347
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=25.55 E-value=3.7e+02 Score=21.89 Aligned_cols=61 Identities=5% Similarity=-0.160 Sum_probs=37.9
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CcHHHHHHhHHHHHHHHHHhhccC
Q 011416 139 EFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWIIMPRL------DWRWLLGLSSIPSFILLAFLGFQP 199 (486)
Q Consensus 139 ~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~------~w~~~f~~~~~~~~~~~~~~~~~~ 199 (486)
.+.+.+++.+..+.+.++.-.+...--.+=+.+.... .+...+++.++++.+..++.-.++
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~ 79 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVS 79 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcccc
Confidence 3455556666666666665555544444444443322 578888999999888877665543
No 348
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=25.31 E-value=6.9e+02 Score=26.14 Aligned_cols=147 Identities=11% Similarity=-0.059 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhh----hhcchHHHHHHHHHHHHhhhhhhcC-CCHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhH
Q 011416 74 VVGAYAWGLVAD----NYGRRMGFLGEALVTAGAGLLSSFS-PNYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGM 148 (486)
Q Consensus 74 ~i~~~~~g~l~d----r~G~r~~~~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~ 148 (486)
...+.+++-++| .-||.+-+.++.++++++++...+. +..|.+...-++.+++.+...+. .+|..
T Consensus 37 l~LG~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga~----------G~Rya 106 (704)
T TIGR01666 37 LILGIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGAV----------GQRYA 106 (704)
T ss_pred HHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHh----------hhhHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHHHHHHhcCC
Q 011416 149 WMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALEKIAQVNKT 227 (486)
Q Consensus 149 ~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (486)
..+.......+-.++|+...+.. +.-...+...++.-.+. ++.+.+.|+.|....-.+..++-.+.++.....-..
T Consensus 107 ~Iaf~tLliaiytmlg~~~~~~w---~~~pllll~GalwY~llsl~~~~l~p~rp~q~~LA~~y~~La~yL~aka~lf~p 183 (704)
T TIGR01666 107 TIAFGSLLVALYTMLGYIEVNVW---FIQPVMLLCGTLWYSVVTLIVHLFFPNRPVQENLAKAFCQLAEYLETKSCFFDP 183 (704)
T ss_pred HHHHHHHHHHHHHHhcccccchH---HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhCCC
Q ss_pred CCCCch
Q 011416 228 KLPNGK 233 (486)
Q Consensus 228 ~~~~~~ 233 (486)
+.+.+.
T Consensus 184 ~~~~~~ 189 (704)
T TIGR01666 184 DEVAEI 189 (704)
T ss_pred Cccchh
No 349
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=25.00 E-value=56 Score=24.86 Aligned_cols=8 Identities=13% Similarity=-0.238 Sum_probs=3.0
Q ss_pred Hhcccccc
Q 011416 465 VMLIPFET 472 (486)
Q Consensus 465 ~~~~~~~~ 472 (486)
.+++.|++
T Consensus 85 ~y~irR~~ 92 (122)
T PF01102_consen 85 SYCIRRLR 92 (122)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 33343333
No 350
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=24.95 E-value=5.7e+02 Score=23.83 Aligned_cols=69 Identities=12% Similarity=0.147 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHH---HhhhhhhcCCCHHHHHHHHHHHHhccCcc
Q 011416 61 EESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTA---GAGLLSSFSPNYITLITLRCLVGVGLGSG 130 (486)
Q Consensus 61 ~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~---~~~~~~~~a~~~~~l~~~r~l~G~~~~~~ 130 (486)
..|.+..+..++..+ .++.+++.+++|.-+.+..+.++.. --.+...+++|......+-.+.|--.|..
T Consensus 48 m~GI~~laP~la~~l-~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~T 119 (354)
T PF04346_consen 48 MAGIMALAPVLAAFL-SPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGAT 119 (354)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhccc
Confidence 446666666666655 4777899999999999988777652 23445667788887777777777666654
No 351
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=24.53 E-value=4.9e+02 Score=23.48 Aligned_cols=56 Identities=7% Similarity=-0.037 Sum_probs=32.8
Q ss_pred HHHHHHHHHhccCcchhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011416 116 LITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAWII 171 (486)
Q Consensus 116 l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~l 171 (486)
--..|.+.|+-.=.+.+.++.+.-.+|++++--..--.....+++.++-+++|-.+
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888876655567788888888865443222222333444445555555554
No 352
>PRK11715 inner membrane protein; Provisional
Probab=24.50 E-value=6.6e+02 Score=24.39 Aligned_cols=20 Identities=15% Similarity=0.022 Sum_probs=10.5
Q ss_pred HhhhccccccccchhhHhHH
Q 011416 403 SLIYAAEIYPTSVRSTGAGA 422 (486)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~g~ 422 (486)
...+.........+|..++.
T Consensus 372 i~~Y~~~vl~~~k~g~~~~~ 391 (436)
T PRK11715 372 IGFYLSAVLRSWKRGLLFAA 391 (436)
T ss_pred HHHHHHHHHhcchHHHHHHH
Confidence 33444455555666665543
No 353
>PRK11111 hypothetical protein; Provisional
Probab=24.18 E-value=4.6e+02 Score=22.45 Aligned_cols=66 Identities=12% Similarity=0.033 Sum_probs=31.9
Q ss_pred hhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHhc
Q 011416 401 TVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCHQM-TAVVLLVVVIVTSILSVML 467 (486)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~ 467 (486)
|...++..+.- +++|-+..--......+.-.+..+.+.++.+.+|-. ..|-+.+++.+....+-..
T Consensus 28 piflslt~~~s-~~~r~~ia~~a~l~a~~ill~f~~~G~~iL~~fGIsl~afrIaGGiiL~~ial~Ml 94 (214)
T PRK11111 28 PVFISMTSHQT-AAERNKTNLTANLSVAIILLISLFLGDFILNLFGISIDSFRIAGGILVVTIAMSMI 94 (214)
T ss_pred HHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 44444444444 444443322222223333344455556667777744 3455666665555444444
No 354
>PRK15015 carbon starvation protein A; Provisional
Probab=23.67 E-value=8.2e+02 Score=25.21 Aligned_cols=102 Identities=15% Similarity=0.183 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHHHHhccCcchhhhhhh--ccccCCCch
Q 011416 69 VFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCLVGVGLGSGHVFLSWF--LEFVPPSNR 146 (486)
Q Consensus 69 ~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~i--~~~~~~~~r 146 (486)
......++..-+|.++-+-|...- +..+..++..++..+-.++.-++.+=+.+.=-.-..+...+- .|+.|.+++
T Consensus 10 w~~~a~~ga~~~~~~al~rge~mn---al~lv~aa~~~y~iaYrfYgr~ia~kv~~lD~~r~TPA~~~~DG~DYvPt~k~ 86 (701)
T PRK15015 10 WTVLSVMGAFALGYIALNRGEQIN---ALWIVVASVCIYLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKK 86 (701)
T ss_pred HHHHHHHHHHHheeeeecCCCchh---HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCceECCCCCCcCcCCcc
Confidence 344556666777777776666521 112222222223333333433333333344333332332222 266665554
Q ss_pred hHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCcH
Q 011416 147 GMWMVIFS-SFWTIGSVSEAIGAWIIMPRLDWR 178 (486)
Q Consensus 147 ~~~~~~~~-~~~~~G~~i~~~l~~~l~~~~~w~ 178 (486)
..+|-.. +..+.|.++||.++. .+||-
T Consensus 87 -VLfGHHFasIAGAGPivGPvlAa----~~Gwl 114 (701)
T PRK15015 87 -VLFGHHFAAIAGAGPLVGPVLAA----QMGYL 114 (701)
T ss_pred -chhHHHHHHHhccCccHHHHHHH----HHcch
Confidence 5555544 444556677777665 36875
No 355
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=23.10 E-value=3.1e+02 Score=20.09 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=17.2
Q ss_pred HHHHHHHHHhhhhhh-hcchHHHHHHHHHHHHh
Q 011416 72 GLVVGAYAWGLVADN-YGRRMGFLGEALVTAGA 103 (486)
Q Consensus 72 ~~~i~~~~~g~l~dr-~G~r~~~~~~~~~~~~~ 103 (486)
...+...+.|...|+ +|-++.+.+..++.+++
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 334445566777775 56555554444444443
No 356
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=23.04 E-value=71 Score=27.38 Aligned_cols=48 Identities=17% Similarity=0.045 Sum_probs=29.8
Q ss_pred HHHHhccCcc-hhhhhhhccccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011416 121 CLVGVGLGSG-HVFLSWFLEFVPPSNRGMWMVIFSSFWTIGSVSEAIGAW 169 (486)
Q Consensus 121 ~l~G~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~ 169 (486)
.-.|+|+|.. ..+..-+.+.+| +......++..+.+-+....|-...-
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~i 227 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSI 227 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467777777 566667777775 55566666666666555555544433
No 357
>PRK11588 hypothetical protein; Provisional
Probab=23.02 E-value=6.7e+02 Score=24.90 Aligned_cols=146 Identities=14% Similarity=0.093 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHhhHHHHHH--------HHHHHHHHhchh--HHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhh
Q 011416 328 DANLYIDEFITSLAEIPGLL--------LAAILVDTAGRK--LSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVM 397 (486)
Q Consensus 328 ~~~~~~~~~~~~i~~~~~~~--------~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (486)
...+.....+..+++.++-+ ..+++.+|++.| .++.+..++..++-...........++..........+
T Consensus 107 ~~aa~ii~filiiGG~f~vi~~TGAi~~~i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi~v~l~~alG 186 (506)
T PRK11588 107 GTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAIIIAPLMVRLG 186 (506)
T ss_pred ccccceeehhhHHhhHHHHHHHhchHHHHHHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC
Q ss_pred hhhhhHhhhccccccccchhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc------cchHHHHHHHHHHHHHHHHhccccc
Q 011416 398 GAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCPLVAVALVANCH------QMTAVVLLVVVIVTSILSVMLIPFE 471 (486)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486)
+.+=.--...-+....+..++.+-|+-.|.-.+..+ ...=..++.++.+++....+.+.++
T Consensus 187 -------------yD~ivg~ai~~lg~~iGf~~s~~NPftvgIAQ~iAglp~~SG~~~R~i~~~v~~~i~i~yv~~YA~k 253 (506)
T PRK11588 187 -------------YDSITTVLVTYVATQIGFATSWMNPFSVAIAQGIAGVPVLSGSGLRIVMWVIFTLIGLIFTMVYASR 253 (506)
T ss_pred -------------CcHHHHHHHHHHHhhhhhcccccCccHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred ccCCCccccccccCC
Q 011416 472 TKGQELSDTVDFTSD 486 (486)
Q Consensus 472 ~~~~~~~~~~~~~~~ 486 (486)
.|+.+.+....|.++
T Consensus 254 VkkdP~kS~~~~~~~ 268 (506)
T PRK11588 254 VKKNPLLSRVHESDR 268 (506)
T ss_pred hcCCCcccccccchh
No 358
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=22.90 E-value=4.9e+02 Score=27.22 Aligned_cols=133 Identities=17% Similarity=0.015 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhh----hhcchHHHHHHHHHHHHhhhhhhcC-CCHHHHHHHHHHHHhccCcchhhhhhhccccCCCchhH
Q 011416 74 VVGAYAWGLVAD----NYGRRMGFLGEALVTAGAGLLSSFS-PNYITLITLRCLVGVGLGSGHVFLSWFLEFVPPSNRGM 148 (486)
Q Consensus 74 ~i~~~~~g~l~d----r~G~r~~~~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~r~~ 148 (486)
...+.+++-+.| .-||.+-++++..+++++++...+. +..|.+...-++.+++.+...+. .+|..
T Consensus 37 l~lG~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga~----------G~r~~ 106 (701)
T TIGR01667 37 LCLGIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGAL----------GQRYA 106 (701)
T ss_pred HHHhhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHh----------hhhHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHhHHHHHHH-HHHhhccCCCchhhhhcCChHHHHHHHH
Q 011416 149 WMVIFSSFWTIGSVSEAIGAWIIMPRLDWRWLLGLSSIPSFIL-LAFLGFQPESPRYLCLKGRTAEAHRALE 219 (486)
Q Consensus 149 ~~~~~~~~~~~G~~i~~~l~~~l~~~~~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 219 (486)
..+.-.....+-.++++...+.. +.-...+...++.-.+. ++...+.|+.|....-.+-.++-.+.++
T Consensus 107 ~I~f~~L~~aiytml~~~~~~~w---~~~pllll~GalwY~l~sll~~~l~p~rp~q~~La~~y~~La~yL~ 175 (701)
T TIGR01667 107 TIAFASLLAAIYTMLGAGEVPVW---FIEPLLILAGTLWYGLLTLIWFLLFPNQPLQESLSRLYRELAEYLE 175 (701)
T ss_pred hHHHHHHHHHHHHHcCcccccHH---HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
No 359
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=22.58 E-value=1.5e+02 Score=23.51 Aligned_cols=50 Identities=8% Similarity=-0.170 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCCCHHHHHHHHHH
Q 011416 67 TSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSPNYITLITLRCL 122 (486)
Q Consensus 67 s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 122 (486)
-.++++..+.+...-.+..|..||+.-.++..+ +-+.++|..|++++.++
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi------~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGISI------AGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 456677778888888888888776654444332 33456777777777665
No 360
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=22.48 E-value=2e+02 Score=20.30 Aligned_cols=41 Identities=10% Similarity=0.103 Sum_probs=27.6
Q ss_pred HHHHHHHHHhhhhhhhcc-------hHHHHHHHHHHHHhhhhhhcCCC
Q 011416 72 GLVVGAYAWGLVADNYGR-------RMGFLGEALVTAGAGLLSSFSPN 112 (486)
Q Consensus 72 ~~~i~~~~~g~l~dr~G~-------r~~~~~~~~~~~~~~~~~~~a~~ 112 (486)
+...+.+..+++.+|..+ ++.+..+.++...+..+++...|
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 344556667777776654 67777777777777777766443
No 361
>KOG4050 consensus Glutamate transporter EAAC1-interacting protein GTRAP3-18 [Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=22.42 E-value=4.1e+02 Score=21.28 Aligned_cols=95 Identities=13% Similarity=0.070 Sum_probs=41.0
Q ss_pred HhhHHHHHHHHHHHHH----HhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhhhhhhHhhhcccccccc
Q 011416 339 SLAEIPGLLLAAILVD----TAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTS 414 (486)
Q Consensus 339 ~i~~~~~~~~~g~l~d----r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (486)
.+..+++.+++..-.| |..++.....-.....++++++...... ..+.++..+|+...++... -+
T Consensus 83 vvvlvi~~liwa~~~~a~~krmr~~hp~~~l~gvllv~yfli~v~~~v---------lv~~F~il~Pv~L~lvHAS--LR 151 (188)
T KOG4050|consen 83 VVVLVIGTLIWAASADANIKRMRTDHPLVTLAGVLLVGYFLISVFGGV---------LVFAFAILFPVLLVLVHAS--LR 151 (188)
T ss_pred HHHHHHHHHHHHHhccHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH--HH
Confidence 3444555555544444 4444444443333444444444332221 1122233344444443222 24
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011416 415 VRSTGAGAANAMGRIGGMVCPLVAVALVANCH 446 (486)
Q Consensus 415 ~~~~~~g~~~~~~~~g~~~~~~i~g~l~~~~g 446 (486)
.|+...-+-|-.-++|---. -+|.+.|..|
T Consensus 152 LRnikNkleN~iEsiglkrT--pMG~lLdal~ 181 (188)
T KOG4050|consen 152 LRNIKNKLENKIESIGLKRT--PMGQLLDALG 181 (188)
T ss_pred HhhHHHHHHHHHhhcCcCCC--cHHHHHHHhc
Confidence 55665556665555543222 2345555544
No 362
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=21.97 E-value=4.9e+02 Score=23.34 Aligned_cols=37 Identities=27% Similarity=0.186 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhhhhhc-CCCHHHHHHHHHHHHhccCcc
Q 011416 94 LGEALVTAGAGLLSSF-SPNYITLITLRCLVGVGLGSG 130 (486)
Q Consensus 94 ~~~~~~~~~~~~~~~~-a~~~~~l~~~r~l~G~~~~~~ 130 (486)
+.+++++++++++..+ .++.|.+.+.-++.+++.+..
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 4455555455444444 355566666666666554433
No 363
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=21.78 E-value=3.5e+02 Score=20.21 Aligned_cols=10 Identities=0% Similarity=0.059 Sum_probs=4.4
Q ss_pred HHhchhHHHH
Q 011416 354 DTAGRKLSIT 363 (486)
Q Consensus 354 dr~g~~~~~~ 363 (486)
.|+++-+...
T Consensus 6 ~KiN~~R~~a 15 (114)
T PF11023_consen 6 SKINKIRTFA 15 (114)
T ss_pred hHHHHHHHHH
Confidence 3455444433
No 364
>PHA03242 envelope glycoprotein M; Provisional
Probab=21.67 E-value=4.2e+02 Score=25.42 Aligned_cols=53 Identities=11% Similarity=-0.075 Sum_probs=22.6
Q ss_pred hhcCCCHHHHHHHHHHHHhccCcc-hhhhhhhccccC----CCchhHHHHHHHHHHHH
Q 011416 107 SSFSPNYITLITLRCLVGVGLGSG-HVFLSWFLEFVP----PSNRGMWMVIFSSFWTI 159 (486)
Q Consensus 107 ~~~a~~~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~----~~~r~~~~~~~~~~~~~ 159 (486)
+++++|+.....--.+..+..=.. +...-.+.|.+- +.+-|...|.+.+...+
T Consensus 242 m~~gNsF~v~~~~~v~~ai~~F~vL~ii~liv~E~vL~~Yv~vl~G~~lG~lia~~~l 299 (428)
T PHA03242 242 TIAANNFHLSLPGTLVCLTAVFALLVVLLLVVVEGVLSHYVRVLPGPHLGALVAAGIV 299 (428)
T ss_pred HHHhcceeeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHH
Confidence 344566654443333333332222 333333444432 34455555555444333
No 365
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=21.57 E-value=4.3e+02 Score=21.18 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=18.5
Q ss_pred hhHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011416 272 LFLMLFSSKLARTTILLWLLLFGNSFAYYAVVLLIS 307 (486)
Q Consensus 272 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (486)
.+-+...++..+++.+.+.+-....+..+...+++.
T Consensus 52 ~IP~~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~ 87 (153)
T PF11947_consen 52 AIPEVVSNRMLRRMAVFVGIPTALGVAVFVVFYYLK 87 (153)
T ss_pred ccCHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 334445566666666665554444444444444443
No 366
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=21.50 E-value=1.8e+02 Score=21.88 Aligned_cols=13 Identities=15% Similarity=0.020 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHH
Q 011416 342 EIPGLLLAAILVD 354 (486)
Q Consensus 342 ~~~~~~~~g~l~d 354 (486)
.++...+.|++..
T Consensus 78 ~fvfT~l~g~~lg 90 (113)
T PF10639_consen 78 AFVFTALTGWLLG 90 (113)
T ss_pred HHHHHHHHHHHhc
Confidence 3444455555544
No 367
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=21.29 E-value=7.3e+02 Score=23.73 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=18.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 011416 145 NRGMWMVIFSSFWTIGSVSEAIGAWIIMPRLDW 177 (486)
Q Consensus 145 ~r~~~~~~~~~~~~~G~~i~~~l~~~l~~~~~w 177 (486)
+|.+...+.....-++..+-|+++.+.-...||
T Consensus 108 eR~~~~~~ii~~~l~~~~vy~~~~~w~w~~~Gw 140 (399)
T PF00909_consen 108 ERIKFSAYIIFGFLWGGLVYPPLAHWVWGENGW 140 (399)
T ss_dssp CCCHHHHHHHHHHHCCCCTHHHHHHHHHCHCHH
T ss_pred ceeeehHHHHHHHHHhhhhccccceEEEecchh
Confidence 455666666665556666666666554333333
No 368
>PTZ00370 STEVOR; Provisional
Probab=21.18 E-value=1.2e+02 Score=27.03 Aligned_cols=20 Identities=20% Similarity=0.374 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHhccc
Q 011416 450 AVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~ 469 (486)
+-+++.++.++..++..++.
T Consensus 260 aalvllil~vvliilYiwly 279 (296)
T PTZ00370 260 AALVLLILAVVLIILYIWLY 279 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444444444
No 369
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=21.15 E-value=1.2e+02 Score=26.92 Aligned_cols=20 Identities=20% Similarity=0.399 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHhccc
Q 011416 450 AVVLLVVVIVTSILSVMLIP 469 (486)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~ 469 (486)
+-+++.++.++..++..++.
T Consensus 264 aalvllil~vvliiLYiWly 283 (295)
T TIGR01478 264 AALVLIILTVVLIILYIWLY 283 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444
No 370
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=20.78 E-value=1.6e+02 Score=21.50 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=40.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHhhhhhhcCC
Q 011416 59 STEESLITTSVFAGLVVGAYAWGLVADNYGRRMGFLGEALVTAGAGLLSSFSP 111 (486)
Q Consensus 59 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~a~ 111 (486)
....|=..++|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|..+..+.+
T Consensus 54 ~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 54 AAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred chhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 44567777888888999999999999998887777777777766665555443
No 371
>PRK03818 putative transporter; Validated
Probab=20.20 E-value=9e+02 Score=24.41 Aligned_cols=44 Identities=7% Similarity=0.059 Sum_probs=26.0
Q ss_pred HhhhhhhhhHhhhcccc-ccccchhhHhHHHHHHHHHHHHHHHHH
Q 011416 394 MCVMGAFTVSLIYAAEI-YPTSVRSTGAGAANAMGRIGGMVCPLV 437 (486)
Q Consensus 394 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~~~~~i 437 (486)
++-....+.....+.|. .+.+.-..+++..+.++-++.++...+
T Consensus 500 ~aG~~t~tp~l~~a~~~~~~~~~~~~gYa~~Yp~~~~~~i~~~~~ 544 (552)
T PRK03818 500 LAGSMTDPPALAFANNLHPTSGAAALSYATVYPLVMFLRIITPQL 544 (552)
T ss_pred HhccCCCcHHHHHHhcccCCCCCcccchHHHHHHHHHHHHHHHHH
Confidence 33344556666777774 555555666776666666655555443
No 372
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=20.19 E-value=5e+02 Score=21.38 Aligned_cols=23 Identities=13% Similarity=0.174 Sum_probs=13.4
Q ss_pred ccccchhhHhHHHHHHHHHHHHH
Q 011416 411 YPTSVRSTGAGAANAMGRIGGMV 433 (486)
Q Consensus 411 ~~~~~~~~~~g~~~~~~~~g~~~ 433 (486)
-|.+....++++...+..+-.++
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti~ 132 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITII 132 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHHH
Confidence 34556667777766665554433
Done!