Citrus Sinensis ID: 011425
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 486 | 2.2.26 [Sep-21-2011] | |||||||
| P54567 | 305 | Uncharacterized protein Y | yes | no | 0.411 | 0.655 | 0.289 | 3e-10 | |
| Q6IRP4 | 336 | Alpha/beta hydrolase doma | N/A | no | 0.279 | 0.404 | 0.272 | 6e-05 | |
| Q8XA81 | 284 | Uncharacterized protein Y | N/A | no | 0.310 | 0.531 | 0.25 | 0.0002 | |
| P77538 | 284 | Uncharacterized protein Y | N/A | no | 0.310 | 0.531 | 0.267 | 0.0003 | |
| Q99390 | 286 | Uncharacterized 31.7 kDa | no | no | 0.201 | 0.342 | 0.284 | 0.0004 |
| >sp|P54567|YQKD_BACSU Uncharacterized protein YqkD OS=Bacillus subtilis (strain 168) GN=yqkD PE=4 SV=1 | Back alignment and function desciption |
|---|
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
P DTP ++ CHG + ++ + + L + D G S G S G++EKD
Sbjct: 77 PHDTP-NTIIICHGVTMNVLNSLKYMHLFLDLGWNVLIYDHRRHGQSGGKTTSYGFYEKD 135
Query: 121 DLKVVVSYLRGNKQTSR--IGLWGRSMGAVTSLLYGAEDPSIAG--MVLDSAFSDLFDLM 176
DL VVS L+ NK R IG+ G SMGAVT+LLY S + D F+ FD
Sbjct: 136 DLNKVVSLLK-NKTNHRGLIGIHGESMGAVTALLYAGAHCSDGADFYIADCPFA-CFDEQ 193
Query: 177 LELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDK 236
L + RLP + + + ++ + + +++ L + K P LF H+ +D
Sbjct: 194 LAYRLRAEYRLPSWPLLPIADFFLKL---RGGYRAREVSPLAVIDKIEKPVLFIHSKDDD 250
Query: 237 FIRARHSDLIFNAYAGDKNI-IKFDGDHNSS 266
+I ++ ++ G K + I +G+H S
Sbjct: 251 YIPVSSTERLYEKKRGPKALYIAENGEHAMS 281
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Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|Q6IRP4|ABHDD_XENLA Alpha/beta hydrolase domain-containing protein 13 OS=Xenopus laevis GN=abhd13 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 67 PCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125
P ++Y HGN+G A+++L + + L +D+ G G SDG+ G + D + V
Sbjct: 115 PTIIYFHGNAGNIGHRLPNALLMLVNLKVNLILVDYRGYGKSDGEPSEEGLYM--DSEAV 172
Query: 126 VSYL--RGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182
+ Y+ R + ++I L+GRS+G ++ +E+ I +VL++ F + + L V
Sbjct: 173 LDYVMTRPDIDKTKIILFGRSLGGAVAIHLASENAHRICALVLENTFLSIPHMASTLFSV 232
Query: 183 YKIR-LPKFTVKMAVQYMRRVIQ 204
+R LP + K R+++Q
Sbjct: 233 LPMRYLPLWCYKNKFLSYRKIVQ 255
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Xenopus laevis (taxid: 8355) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8XA81|YHFR_ECO57 Uncharacterized protein YfhR OS=Escherichia coli O157:H7 GN=yhfR PE=3 SV=4 | Back alignment and function description |
|---|
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 17/168 (10%)
Query: 6 INFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTP 65
INF P Y PD + + +E G LQ S P D
Sbjct: 31 INFFYYPDDKIYGPD-------------PWSAESVEFTAKDGTRLQGWFIPSSTGPADNA 77
Query: 66 LPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124
+ +++ HGN+G A+ V LP N +F D+ G G S G G + +
Sbjct: 78 IATIIHAHGNAG-NMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAI 136
Query: 125 VVSYLRGNKQTSRIGLWGRSMGA--VTSLLYGAEDPSIAGMVLDSAFS 170
V R + R+ L+G+S+G + +++ + I ++LDS F+
Sbjct: 137 NVVRHRSDVNPQRLVLFGQSIGGANILAVIGQGDREGIRAVILDSTFA 184
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Escherichia coli O157:H7 (taxid: 83334) |
| >sp|P77538|YFHR_ECOLI Uncharacterized protein YfhR OS=Escherichia coli (strain K12) GN=yfhR PE=3 SV=4 | Back alignment and function description |
|---|
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 17/168 (10%)
Query: 6 INFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTP 65
INF P Y PD + + +E G LQ S P D
Sbjct: 31 INFFYYPDDKIYGPD-------------PWSAESVEFTAKDGTRLQGWFIPSSTGPADNA 77
Query: 66 LPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124
+ +++ HGN+G + A+ V LP N +F D+ G G S G G + +
Sbjct: 78 IATIIHAHGNAGNMS-AHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAI 136
Query: 125 VVSYLRGNKQTSRIGLWGRSMGAVTSL-LYGAED-PSIAGMVLDSAFS 170
V R + R+ L+G+S+G L + G D I ++LDS F+
Sbjct: 137 NVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFA 184
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Escherichia coli (strain K12) (taxid: 83333) |
| >sp|Q99390|YPT2_ECOLX Uncharacterized 31.7 kDa protein in traX-finO intergenic region OS=Escherichia coli PE=3 SV=1 | Back alignment and function description |
|---|
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 67 PCVVYCHGNSGCRADANEAAVILLP--------SNITLFTLDFSGSGLSDGDYVSL-GWH 117
P ++ CHG G R +LLP + T D+ G G SDG+ L
Sbjct: 26 PLIILCHGFCGIRN-------VLLPCFANAFTEAGFATITFDYRGFGESDGERGRLVPAM 78
Query: 118 EKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD 171
+ +D+ V+++ + RIGLWG S+G A+D + +V AF+D
Sbjct: 79 QTEDIISVINWAEKQECIDNQRIGLWGTSLGGGHVFSAAAQDQRVKCIVSQLAFAD 134
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Escherichia coli (taxid: 562) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 486 | ||||||
| 255568530 | 493 | catalytic, putative [Ricinus communis] g | 0.997 | 0.983 | 0.795 | 0.0 | |
| 449434066 | 489 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.975 | 0.729 | 0.0 | |
| 356565447 | 481 | PREDICTED: uncharacterized protein LOC10 | 0.979 | 0.989 | 0.725 | 0.0 | |
| 297804474 | 501 | hypothetical protein ARALYDRAFT_915007 [ | 0.997 | 0.968 | 0.690 | 0.0 | |
| 79476960 | 502 | esterase/lipase domain-containing protei | 0.997 | 0.966 | 0.689 | 0.0 | |
| 357123878 | 497 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.959 | 0.652 | 0.0 | |
| 147840892 | 595 | hypothetical protein VITISV_035499 [Viti | 0.952 | 0.778 | 0.604 | 0.0 | |
| 225217050 | 502 | unknown [Oryza granulata] | 0.991 | 0.960 | 0.640 | 0.0 | |
| 225216955 | 502 | unknown [Oryza officinalis] | 0.991 | 0.960 | 0.640 | 1e-180 | |
| 225217034 | 502 | unknown [Oryza brachyantha] | 0.991 | 0.960 | 0.638 | 1e-180 |
| >gi|255568530|ref|XP_002525239.1| catalytic, putative [Ricinus communis] gi|223535536|gb|EEF37205.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/494 (79%), Positives = 429/494 (86%), Gaps = 9/494 (1%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MIDQFINFVIRPPRA YNPDQYLWERDF LAGR+YKR DLE+ N RGH LQCSHY+PSPF
Sbjct: 1 MIDQFINFVIRPPRAAYNPDQYLWERDFTLAGRAYKRLDLELTNIRGHTLQCSHYVPSPF 60
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
PEDTPLPCV+YCHGNSGCRADANEAAVILLPSNIT+FTLDFSGSGLSDGDYVSLGWHE+D
Sbjct: 61 PEDTPLPCVIYCHGNSGCRADANEAAVILLPSNITVFTLDFSGSGLSDGDYVSLGWHERD 120
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLKVVVSYLR +KQ SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS+LFDLM+ELV
Sbjct: 121 DLKVVVSYLRSSKQISRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSNLFDLMMELV 180
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLK+APKTFIP LFGHASEDKFI++
Sbjct: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKVAPKTFIPTLFGHASEDKFIQS 240
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
HSDLIF +YAGDKN+IKFDGDHNSSRPQFYYDS+SIFF+NVLHPPQ ++ S EKYY
Sbjct: 241 HHSDLIFKSYAGDKNMIKFDGDHNSSRPQFYYDSLSIFFFNVLHPPQSNASSS-NLEKYY 299
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIAS-- 358
+LG LK GA++D+SLL EIITGLR A TDAASSS+APPSI T KPV EL+SEAVP+ S
Sbjct: 300 NLGDLKVGAAIDESLLCEIITGLRSACTDAASSSAAPPSIPTIKPVSELISEAVPVTSIA 359
Query: 359 -----KENSAVNEDEPSSFQDKLSGLSEECCSYTSSNRESWGRCSSLGGSDEESSADCAA 413
EN ++ D+PS QDK +G SEECCSYTSSNRESWGRCSSLG SDEESSA+C A
Sbjct: 360 VDSVVNENDRISSDDPSKLQDKPNGQSEECCSYTSSNRESWGRCSSLGCSDEESSAECRA 419
Query: 414 ADRNRQTTFNALATPVRS-KHKSLELPKEEKKKKKAAAGGKKTKHEKLEKLEALSKRLRL 472
AD + + A ATP+RS + KS + PKEEKKKKK A KK K EK EKLEA SKRLR
Sbjct: 420 ADNSHEMALKAFATPLRSIQQKSPKAPKEEKKKKKTLAAPKKLKGEKFEKLEAFSKRLRH 479
Query: 473 CIMRRVKHQRHLSS 486
CI+RRV HQRH SS
Sbjct: 480 CILRRVNHQRHRSS 493
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449434066|ref|XP_004134817.1| PREDICTED: uncharacterized protein LOC101211724 [Cucumis sativus] gi|449508739|ref|XP_004163397.1| PREDICTED: uncharacterized protein LOC101223332 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/488 (72%), Positives = 410/488 (84%), Gaps = 11/488 (2%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MIDQFINFVIRPPRA+YNPDQYLWE+ F LAGR+Y+RQDLE+RN+RGH LQCSHY+PS
Sbjct: 1 MIDQFINFVIRPPRADYNPDQYLWEKSFTLAGRAYQRQDLELRNSRGHTLQCSHYLPSSI 60
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
PEDTPLPCV+YCHGNSGCRADANEAAVILLPSNIT+FTLDFSGSGLSDGDYVSLGWHE+D
Sbjct: 61 PEDTPLPCVIYCHGNSGCRADANEAAVILLPSNITVFTLDFSGSGLSDGDYVSLGWHERD 120
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLKVVV+YLR NK SRIGLWGRSMGAVTSLLYGAEDPS+AGMVLDSAFS+L++LM+ELV
Sbjct: 121 DLKVVVTYLRSNKHVSRIGLWGRSMGAVTSLLYGAEDPSVAGMVLDSAFSNLYNLMMELV 180
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIRLPKFTVKMAVQYMRRVI+K+AKFDIM+LNCL++ PKTFIPALFGHA+ DKF++
Sbjct: 181 DVYKIRLPKFTVKMAVQYMRRVIEKRAKFDIMNLNCLQVTPKTFIPALFGHANCDKFVQP 240
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
HS+LI+N+YAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQ+PS H+ K EKYY
Sbjct: 241 HHSELIYNSYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQLPSAHASKLEKYY 300
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASK- 359
DLG LK GA D++L+YEII+ LR D A SSSA PS+ T K V +L+SE P+ ++
Sbjct: 301 DLGDLKIGADKDENLIYEIISRLRSTGNDVAGSSSA-PSVPTTKFVGDLISEIPPVITEI 359
Query: 360 -----ENSAVNEDEPSSFQDKLSGLSEECCSYTSSNRESWGRCSSLGGSDEESSADCAAA 414
+ S +N DE S+ QD+ G +EECCSYTSSNRESWGRCSSLGGS+EESSADC +
Sbjct: 360 DTIPNDYSTINGDELSNLQDQPDGETEECCSYTSSNRESWGRCSSLGGSEEESSADCMVS 419
Query: 415 DRNRQTTFNALATPVRSKHK----SLELPKEEKKKKKAAAGGKKTKHEKLEKLEALSKRL 470
Q T A TP+RS S E K++KKKK A + +K K K EKLEALS+ L
Sbjct: 420 KNKFQETLEAFPTPLRSTQGKPSYSSEGDKKKKKKKVATSQSQKQKKSKTEKLEALSRHL 479
Query: 471 RLCIMRRV 478
RLCI+RR+
Sbjct: 480 RLCILRRI 487
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565447|ref|XP_003550951.1| PREDICTED: uncharacterized protein LOC100784510 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/491 (72%), Positives = 408/491 (83%), Gaps = 15/491 (3%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MI+QFINFVIRPPRAEYNPDQYLWE++F L GR+Y+RQDLE++N RG+ L+CSHY+PSPF
Sbjct: 1 MIEQFINFVIRPPRAEYNPDQYLWEKEFTLTGRTYQRQDLELKNTRGYTLKCSHYLPSPF 60
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
PEDT LPCV+YCHGNSGCRADANEAAVILLPSNIT+FTLDFSGSGLSDGDYVSLGWHEKD
Sbjct: 61 PEDTSLPCVIYCHGNSGCRADANEAAVILLPSNITVFTLDFSGSGLSDGDYVSLGWHEKD 120
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLK+VVSYLR NKQ SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS+L+DLM+ELV
Sbjct: 121 DLKMVVSYLRSNKQISRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSNLYDLMMELV 180
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIRLPKFTVKMAVQYMRRVI+KKAKFDIM+LNCL++APKTFIP LFGHAS+DKFI+
Sbjct: 181 DVYKIRLPKFTVKMAVQYMRRVIEKKAKFDIMNLNCLQVAPKTFIPVLFGHASDDKFIQP 240
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
HSDLI AYAGDKN+IKFDGDHNSSRPQF+YDSVSIFFYNVLHPP +P H K EKYY
Sbjct: 241 HHSDLISEAYAGDKNVIKFDGDHNSSRPQFFYDSVSIFFYNVLHPPNVPRAH--KLEKYY 298
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKE 360
+LG LK G+ +D+SLLYEI++ LR ASTDAASSSS P+I + K V ELLSE P+ E
Sbjct: 299 NLGDLKLGSGVDESLLYEILSSLRSASTDAASSSSVLPAISSTKSVSELLSEVAPVTDTE 358
Query: 361 N----SAVNEDEPSSFQD-KLSGLSEECCSYTSSNRESWGRCSSLGGSDEESSADCAAAD 415
+ DE + QD KL+G E+CCSYTSSNRESWGRCSSLGGSDEES AD
Sbjct: 359 SFFREDTNGNDEATDVQDKKLNGEGEDCCSYTSSNRESWGRCSSLGGSDEESCAD----- 413
Query: 416 RNRQTTFNALATPVRSKHKSLELPKEEKKKKKAAAGGKKTKHEKLEKLEALSKRLRLCIM 475
T ATP+RS ++ + ++ ++KK GKK K E+ EKLEALS+RLRLC++
Sbjct: 414 ---DTLSQVFATPMRSTNEKEKDDDKKHEEKKKKKKGKKPKSERFEKLEALSRRLRLCLL 470
Query: 476 RRVKHQRHLSS 486
+ H RH S+
Sbjct: 471 KGSTHGRHKST 481
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297804474|ref|XP_002870121.1| hypothetical protein ARALYDRAFT_915007 [Arabidopsis lyrata subsp. lyrata] gi|297315957|gb|EFH46380.1| hypothetical protein ARALYDRAFT_915007 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/491 (69%), Positives = 389/491 (79%), Gaps = 6/491 (1%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MIDQFINFVIRPPRAEY+PDQYLWE++F L G KRQDLE+ N+RGH L+CSHY+PS
Sbjct: 10 MIDQFINFVIRPPRAEYDPDQYLWEKEFSLGGTECKRQDLELTNSRGHTLRCSHYVPSSS 69
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
EDTPLPCV+YCHGNSGCRADANEA ++LLPSNIT+FTLDFSGSGLS+GDYVSLGWHEKD
Sbjct: 70 LEDTPLPCVIYCHGNSGCRADANEAVMVLLPSNITVFTLDFSGSGLSEGDYVSLGWHEKD 129
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLK VVSYLR + Q SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS+LFDLM+ELV
Sbjct: 130 DLKTVVSYLRNSDQVSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSNLFDLMMELV 189
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIRLPKFTVK+AVQYMRR+IQKKAKF+IMDLNC+K++PKTFIPALFGHASEDKFI+
Sbjct: 190 DVYKIRLPKFTVKVAVQYMRRIIQKKAKFNIMDLNCVKVSPKTFIPALFGHASEDKFIQP 249
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
HSDLI YAGDKNIIKFDGDHNSSRPQ +YDSV IFFYNVL PP I S S K E YY
Sbjct: 250 HHSDLILKCYAGDKNIIKFDGDHNSSRPQSFYDSVLIFFYNVLRPPPISSACSSKLESYY 309
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKE 360
LG + +D+S LYEII+GLR A D ASSSSAPP+ LT KP ELLSEA+P+ K+
Sbjct: 310 SLGDVNSATGLDESFLYEIISGLRSACIDVASSSSAPPAPLTTKPTTELLSEAMPMTDKD 369
Query: 361 NSAV-----NEDEPSSFQDKLSGLSEECCSYTSSNRESWGRCSSLGGSDEESSADCAAAD 415
+ V N D+P +F+ + E+ CS+TSSNRESWGRCSSLGG++E+ S D
Sbjct: 370 DVPVEDNDHNMDDPENFEGRPVDQFEDGCSFTSSNRESWGRCSSLGGTEEDESLTACEGD 429
Query: 416 RNRQTT-FNALATPVRSKHKSLELPKEEKKKKKAAAGGKKTKHEKLEKLEALSKRLRLCI 474
+ +T N P S + E KE+K K KK +HEKLE+LEA SKRLR I
Sbjct: 430 QVEKTADINTEQKPRDSSREEEEDSKEKKIKNGGETDAKKPRHEKLERLEAFSKRLRHRI 489
Query: 475 MRRVKHQRHLS 485
++RV H+RH S
Sbjct: 490 LKRVNHRRHRS 500
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79476960|ref|NP_193448.2| esterase/lipase domain-containing protein [Arabidopsis thaliana] gi|26452722|dbj|BAC43443.1| unknown protein [Arabidopsis thaliana] gi|332658454|gb|AEE83854.1| esterase/lipase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/492 (68%), Positives = 389/492 (79%), Gaps = 7/492 (1%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MIDQFINFVIRPPRAEY+PDQYLWE++F L G KRQDLE+ N+RGH L+CSHY+PS
Sbjct: 10 MIDQFINFVIRPPRAEYDPDQYLWEKEFSLGGTKCKRQDLELTNSRGHTLRCSHYVPSSS 69
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
EDTPLPCV+YCHGNSGCRADANEA ++LLPSNIT+FTLDFSGSGLS+GDYVSLGWHEKD
Sbjct: 70 REDTPLPCVIYCHGNSGCRADANEAVMVLLPSNITVFTLDFSGSGLSEGDYVSLGWHEKD 129
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLK VVSYLR + Q SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS+LFDLM+ELV
Sbjct: 130 DLKTVVSYLRNSNQVSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSNLFDLMMELV 189
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIRLPKFTVK+AVQYMRR+IQKKAKF+IMDLNC+K++PKTFIPALFGHAS DKFI+
Sbjct: 190 DVYKIRLPKFTVKVAVQYMRRIIQKKAKFNIMDLNCVKVSPKTFIPALFGHASGDKFIQP 249
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
HSDLI YAGDKNIIKFDGDHNSSRPQ YYDSV +FFYNVL PP I S++S K E YY
Sbjct: 250 HHSDLILKCYAGDKNIIKFDGDHNSSRPQSYYDSVLVFFYNVLRPPPISSSYSSKLESYY 309
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKE 360
LG + +D+S LYEII+GLR A D ASSSSAPP+ LT KP +ELLSEA+P+ +
Sbjct: 310 SLGDVNSATGLDESFLYEIISGLRSACIDVASSSSAPPAPLTTKPTNELLSEAMPMIDTD 369
Query: 361 NSAV-----NEDEPSSFQDKLSGLSEECCSYTSSNRESWGRCSSLGGSDEESSADCAAAD 415
V N D+P +F+ K EE CS+TSSNRESWGRCSSLGG++E+ S D
Sbjct: 370 TVLVEDNDHNVDDPENFEGKRIDQFEEGCSFTSSNRESWGRCSSLGGTEEDESLTAGEGD 429
Query: 416 RNRQTT-FNALATPVRSKHKSLELPKEEKKKKKAA-AGGKKTKHEKLEKLEALSKRLRLC 473
+ +T N P S + E +EKK K KK +HEKLE+LEA SKRLR
Sbjct: 430 QVEKTADVNTERKPRDSSREEEEEDSKEKKIKNGGETDAKKPRHEKLERLEAFSKRLRHY 489
Query: 474 IMRRVKHQRHLS 485
I++RV H+RH S
Sbjct: 490 ILKRVNHRRHRS 501
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357123878|ref|XP_003563634.1| PREDICTED: uncharacterized protein LOC100831715 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/506 (65%), Positives = 384/506 (75%), Gaps = 29/506 (5%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MI+QF+NFVIRPPRAEYNPDQYLWE +F LAGR YKR DLE+ N R L+CSHY+PS
Sbjct: 1 MIEQFVNFVIRPPRAEYNPDQYLWEPEFTLAGRKYKRLDLELSNERNQTLKCSHYVPSVI 60
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
PE+T LPCV+YCHGNSGCRADANEAAVILLPSNIT+F LDF+GSGLS G+YVSLGWHEK
Sbjct: 61 PENTALPCVIYCHGNSGCRADANEAAVILLPSNITVFALDFAGSGLSGGEYVSLGWHEKQ 120
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLK VVS+LR NK+ S IGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS+L+DLMLELV
Sbjct: 121 DLKCVVSFLRNNKEVSCIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSNLYDLMLELV 180
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIR+PKFTVKMAVQYMRRVIQ++AKFDIMDLN ++ APKTFIPALFGHAS D FI++
Sbjct: 181 DVYKIRVPKFTVKMAVQYMRRVIQRRAKFDIMDLNVVQFAPKTFIPALFGHASNDMFIQS 240
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
HSD I YAGDKN+IKFDGDHNS RPQFYYDSVSIFFYNVLHPPQ PS S K EKYY
Sbjct: 241 HHSDRIHQTYAGDKNLIKFDGDHNSPRPQFYYDSVSIFFYNVLHPPQFPSVCSNKLEKYY 300
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTDAASSSSAPPSILTA-KPVDELLSEAVPIAS- 358
+L GA ++SLLYEII GLR A TDA SSS+A S+ A K V ELL+E V S
Sbjct: 301 NL-----GAGTNESLLYEIINGLRAAGTDAGSSSAAATSLTNATKSVVELLTERVNQLSV 355
Query: 359 ----------KENSAVNEDEP----SSFQDKLSGLSEECCSYTSSNRESWGRCSSLGGSD 404
EN + E + S QDK + +EECCSYTSS RESWGRCSSLG +
Sbjct: 356 KNDNDLDFLLDENHNLTEMDSNTAESHTQDKTNRQNEECCSYTSSTRESWGRCSSLGAAS 415
Query: 405 EESSAD---CAAADRNRQTTFNALATPVRS-KHKSLELPKEEKKKKKAAAGGKKTKHEKL 460
+ SS+ + ++++ T ALATP+R + K L +PKE K + + K+ E+
Sbjct: 416 DRSSSGERPGISNNKHKSMTLRALATPLRRIRRKPLTIPKERKNR----SLWKRLNQERH 471
Query: 461 EKLEALSKRLRLCIMRRVKHQRHLSS 486
+ E+L++R RLCI + KH+R SS
Sbjct: 472 DMGESLTQRFRLCIQGQAKHKRTKSS 497
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147840892|emb|CAN66506.1| hypothetical protein VITISV_035499 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/594 (60%), Positives = 403/594 (67%), Gaps = 131/594 (22%)
Query: 14 RAEYNPDQYLWERDFMLAGRSYKRQDLE-----------IRNARGHVLQCSHYMPSPFPE 62
+AEYNPDQYLWE+DF LAGR+YKRQDLE + N RGH L CSHY+PSPFPE
Sbjct: 12 QAEYNPDQYLWEKDFTLAGRTYKRQDLEASMDNSYQNFTLTNGRGHTLHCSHYVPSPFPE 71
Query: 63 DTPLPCVVYCHGN-------------------SGCRADANEAAVILLPSNITLFTLDFSG 103
DTPLPCV+YCHGN SGCRADANEAAVILLPSNIT+FTLDFSG
Sbjct: 72 DTPLPCVIYCHGNRVLRMREFRIDSFGSCGQYSGCRADANEAAVILLPSNITVFTLDFSG 131
Query: 104 SGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGM 163
SGLSDGDYVSLGWHE+DDLKVVVS+LR NKQ SRIGLWGRSMGAVTSLLYGAEDPSIAGM
Sbjct: 132 SGLSDGDYVSLGWHERDDLKVVVSHLRSNKQISRIGLWGRSMGAVTSLLYGAEDPSIAGM 191
Query: 164 VLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT 223
VLDSAFS+LFDLM+ELVD VKMAVQYMRRVIQKKAKFDIMDLNCL++APKT
Sbjct: 192 VLDSAFSNLFDLMMELVD----------VKMAVQYMRRVIQKKAKFDIMDLNCLQVAPKT 241
Query: 224 FIPALFGHASEDKFIRARHSDLIFNAYA---------GDKNIIKFDGDHNSSRPQFYYDS 274
FIPALFGHA ED+FI+ HSD+IF +Y+ GDKNIIKFDGDHNSSRPQFYYDS
Sbjct: 242 FIPALFGHAIEDRFIQPHHSDIIFKSYSVLCHSGGLVGDKNIIKFDGDHNSSRPQFYYDS 301
Query: 275 VSIFFYNVLHPPQIPSTHSIKAEKYYDLGALKFGASMDQS-------------------- 314
VSIFFYNVLHPPQ+ S + K +KYYDLG LK GA MD++
Sbjct: 302 VSIFFYNVLHPPQVSSVYPSKLDKYYDLGDLKIGAGMDETSEEELRSLGQLYGSFFSGVG 361
Query: 315 ----------LLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIAS----KE 360
+LYEII GLR A TDAASSSSAPPSI + K V E LSE P+ S E
Sbjct: 362 VGQWREEYMRVLYEIIAGLRTAGTDAASSSSAPPSISSTKFVGEFLSEIAPVTSVSMLNE 421
Query: 361 NSAVNEDEPSSFQ----------------------------------------------D 374
++N D+P FQ D
Sbjct: 422 EISINGDDPLHFQVMLGYMHERDICTVHVVIKAMFVFVYEREEGDHALIHAPLCGGSELD 481
Query: 375 KLSGLSEECCSYTSSNRESWGRCSSLGGSDEESSADCAAADRNRQTTFNALATPVRSKHK 434
K +G ++ECCSYTSSNRESWGRCSSLGGSDEE+SADCAAA+ + Q T ALATP+RS +
Sbjct: 482 KPNGQNDECCSYTSSNRESWGRCSSLGGSDEETSADCAAANNSHQMTLKALATPLRSTQQ 541
Query: 435 --SLELPKEEKKKKKAAAGGKKTKHEKLEKLEALSKRLRLCIMRRVKHQRHLSS 486
S +++KKK K KK K EK EKLEALS+RLRLCI++RV H+RH SS
Sbjct: 542 KPSDPPEEKKKKKTKPPTAPKKPKREKFEKLEALSQRLRLCILKRVNHRRHHSS 595
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225217050|gb|ACN85333.1| unknown [Oryza granulata] | Back alignment and taxonomy information |
|---|
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/506 (64%), Positives = 386/506 (76%), Gaps = 24/506 (4%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MI+QF+NFVIRPPRAEYNPDQYLWE +F LAGR Y+R DLE+ N R L+CSHY+P+
Sbjct: 1 MIEQFVNFVIRPPRAEYNPDQYLWEPEFTLAGRKYRRIDLELTNGRDQALKCSHYVPAVI 60
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
PE+T LPCV+YCHGNSGCRADANEAAVILLPSNITLFTLDF+GSGLS G+YVSLGWHEK
Sbjct: 61 PENTALPCVIYCHGNSGCRADANEAAVILLPSNITLFTLDFAGSGLSGGEYVSLGWHEKQ 120
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLK VVS+LR NK+ S IGLWGRSMGAVTSLLYGAEDPSIAG+VLDSAFS+L+DLM+ELV
Sbjct: 121 DLKCVVSFLRNNKEVSCIGLWGRSMGAVTSLLYGAEDPSIAGLVLDSAFSNLYDLMMELV 180
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIR+PKFTVKMAVQYMRRVIQ++AKFDIMDL+ ++ APKTFIPALFGHAS D FI+
Sbjct: 181 DVYKIRVPKFTVKMAVQYMRRVIQRRAKFDIMDLDVVQFAPKTFIPALFGHASNDMFIQP 240
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
H+D I AYAGDKN+IKFDGDHNS RPQFYYDSVSIFFYNVLHPPQ PS S K ++YY
Sbjct: 241 HHTDRIHQAYAGDKNLIKFDGDHNSPRPQFYYDSVSIFFYNVLHPPQFPSVCSNKLDEYY 300
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTD-AASSSSAPPSILTAKPVDELLSEAVPIAS- 358
+LGA K GA ++SLLYEII GLR A D +SS++A K V ELL+E V S
Sbjct: 301 NLGAFKVGAGTNESLLYEIINGLRAAGPDAGSSSAAAANFTNATKSVVELLTERVNQLSI 360
Query: 359 ----------KENSAVNEDEP----SSFQDKLSGLSEECCSYTSSNRESWGRCSSLGGSD 404
EN + E + S +DK + +EECCSYTSSNRESWGRCSSLG +
Sbjct: 361 KTDNDLDFLLDENHNLTEMDTDTAESHLEDKSNRQNEECCSYTSSNRESWGRCSSLGAAS 420
Query: 405 EESSADCAA---ADRNRQTTFNALATPVRS-KHKSLELPKEEKKKKKAAAGGKKTKHEKL 460
+ SS + + +++ T ALATP+R + KSL +PKE K + + K+ K E+
Sbjct: 421 DGSSLGERSEIPSHKHKSMTLRALATPLRRIRRKSLAIPKERKNR----SLWKRLKQERQ 476
Query: 461 EKLEALSKRLRLCIMRRVKHQRHLSS 486
E E+L++R RLC+ + +H+R SS
Sbjct: 477 EMGESLTQRFRLCLQGQAQHKRTKSS 502
|
Source: Oryza granulata Species: Oryza granulata Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225216955|gb|ACN85247.1| unknown [Oryza officinalis] | Back alignment and taxonomy information |
|---|
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 324/506 (64%), Positives = 384/506 (75%), Gaps = 24/506 (4%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MI+QF+NFVIRPPRAEYNPDQYLWE +F LAGR YKR DLE+ N R L+CSHY+P+
Sbjct: 1 MIEQFVNFVIRPPRAEYNPDQYLWEPEFTLAGRKYKRIDLELTNGRDQTLKCSHYVPAVI 60
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
P++T LPCV+YCHGNSGCRADANEAAVILLPSNITLFTLDF+GSGLS G+YVSLGWHEK
Sbjct: 61 PDNTALPCVIYCHGNSGCRADANEAAVILLPSNITLFTLDFAGSGLSGGEYVSLGWHEKQ 120
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLK VVS+LR NK+ S IGLWGRSMGAVTSLLYGAEDPSIAG+VLDSAFS+L+DLM+ELV
Sbjct: 121 DLKCVVSFLRNNKEVSCIGLWGRSMGAVTSLLYGAEDPSIAGLVLDSAFSNLYDLMMELV 180
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIR+PKFTVKMAVQYMRRVIQ++AKFDIMDL+ ++ APKTFIPALFGHAS D FI+
Sbjct: 181 DVYKIRVPKFTVKMAVQYMRRVIQRRAKFDIMDLDVVQFAPKTFIPALFGHASNDMFIQP 240
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
H+D I AYAGDKN+IKFDGDHNS RPQFYYDSVSIFFYNVLHPPQ PS S K +KYY
Sbjct: 241 HHTDRIHQAYAGDKNLIKFDGDHNSPRPQFYYDSVSIFFYNVLHPPQFPSVCSNKLDKYY 300
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTD-AASSSSAPPSILTAKPVDELLSEAVPIAS- 358
+LGA K GA ++SLLYEII GLR A D +SS++A K V ELL+E V S
Sbjct: 301 NLGAFKVGAGTNESLLYEIINGLRAAGPDAGSSSAAAANFTNATKSVVELLTERVNQLSI 360
Query: 359 ----------KENSAVNEDEP----SSFQDKLSGLSEECCSYTSSNRESWGRCSSLGGSD 404
EN + E + S +DK + +EECCSYTSSNRESWGRCSSLG +
Sbjct: 361 KTDNDLDFLLDENHNLTEMDTHTAESHLEDKSNRQNEECCSYTSSNRESWGRCSSLGAAS 420
Query: 405 EESSAD---CAAADRNRQTTFNALATPVRS-KHKSLELPKEEKKKKKAAAGGKKTKHEKL 460
+ SS + +++ T ALATP+R + K L +PKE K + + K+ K E+
Sbjct: 421 DGSSLGERPEIPSHKHKSMTLRALATPLRRIRRKPLTIPKERKNR----SLWKRLKQERQ 476
Query: 461 EKLEALSKRLRLCIMRRVKHQRHLSS 486
E E+L++R RLC+ + +H+R SS
Sbjct: 477 EMGESLTQRFRLCLQGQAQHKRTNSS 502
|
Source: Oryza officinalis Species: Oryza officinalis Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225217034|gb|ACN85318.1| unknown [Oryza brachyantha] | Back alignment and taxonomy information |
|---|
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 323/506 (63%), Positives = 383/506 (75%), Gaps = 24/506 (4%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MI+QF+NFVIRPPRAEYNPDQYLWE +F LAGR Y+R DLE+ N R L+CSHY+P+
Sbjct: 1 MIEQFVNFVIRPPRAEYNPDQYLWEPEFTLAGRKYRRIDLELTNGRDQTLKCSHYVPAVV 60
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
PE+T LPCV+YCHGNSGCRADANEAAVILLPSNITLFTLDF+GSGLS G+YVSLGWHEK
Sbjct: 61 PENTALPCVIYCHGNSGCRADANEAAVILLPSNITLFTLDFAGSGLSGGEYVSLGWHEKQ 120
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLK VVS+LR NK+ S IGLWGRSMGAVTSLLYGAEDPSIAG+VLDSAFS+L+DLM+ELV
Sbjct: 121 DLKCVVSFLRNNKEVSCIGLWGRSMGAVTSLLYGAEDPSIAGLVLDSAFSNLYDLMMELV 180
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIR+PKFTVKMAVQYMRRVIQ++AKFDIMDL+ ++ APKTFIPALFGHAS D FI+
Sbjct: 181 DVYKIRVPKFTVKMAVQYMRRVIQRRAKFDIMDLDVVQFAPKTFIPALFGHASNDMFIQP 240
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
H+D I AYAGDKN+I+FDGDHNS RPQFYYDSVSIFFYNVLHPPQ PS S K +KYY
Sbjct: 241 HHTDRIHQAYAGDKNLIRFDGDHNSPRPQFYYDSVSIFFYNVLHPPQFPSVCSNKLDKYY 300
Query: 301 DLGALKFGASMDQSLLYEIITGLRCASTD-AASSSSAPPSILTAKPVDELLSEAVPIAS- 358
+LGA K GA ++SLLYEII GLR A D +SS++A K V ELL+E V S
Sbjct: 301 NLGAFKVGAGTNESLLYEIINGLRAAGPDAGSSSAAAANFTNATKSVVELLTERVNQLSI 360
Query: 359 ----------KENSAVNEDEP----SSFQDKLSGLSEECCSYTSSNRESWGRCSSLGGSD 404
EN + E + S +DK + +EECCSYTSSNRESWGRCSSLG +
Sbjct: 361 KTDNDLDFLLDENHNLTEMDTHTAESHLEDKSNRQNEECCSYTSSNRESWGRCSSLGAAS 420
Query: 405 EESSAD---CAAADRNRQTTFNALATPVRS-KHKSLELPKEEKKKKKAAAGGKKTKHEKL 460
+ SS +++ T ALATP+R + K L +PKE K + + K+ K E+
Sbjct: 421 DGSSLGERPEIPTHKHKSMTLRALATPLRRIRRKPLAIPKERKNR----SLWKRLKQERQ 476
Query: 461 EKLEALSKRLRLCIMRRVKHQRHLSS 486
E E+L++R RLC+ + +H+R SS
Sbjct: 477 EMGESLTQRFRLCLQGQAQHKRTKSS 502
|
Source: Oryza brachyantha Species: Oryza brachyantha Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 486 | ||||||
| TAIR|locus:2130604 | 502 | AT4G17150 [Arabidopsis thalian | 0.827 | 0.800 | 0.724 | 3.2e-162 | |
| TAIR|locus:2129585 | 558 | AT4G14290 [Arabidopsis thalian | 0.623 | 0.543 | 0.677 | 1.9e-115 | |
| TAIR|locus:2088085 | 566 | AT3G23540 [Arabidopsis thalian | 0.590 | 0.507 | 0.703 | 2.2e-114 | |
| DICTYBASE|DDB_G0295699 | 576 | rsc11-2 "alpha/beta hydrolase | 0.596 | 0.503 | 0.506 | 8.4e-74 | |
| DICTYBASE|DDB_G0272791 | 576 | rsc11-1 "alpha/beta hydrolase | 0.596 | 0.503 | 0.506 | 8.4e-74 | |
| UNIPROTKB|Q81MC1 | 307 | BAS4015 "Uncharacterized prote | 0.454 | 0.719 | 0.253 | 1.2e-11 | |
| TIGR_CMR|BA_4328 | 307 | BA_4328 "conserved hypothetica | 0.454 | 0.719 | 0.253 | 1.2e-11 | |
| UNIPROTKB|P77538 | 284 | yfhR "predicted peptidase" [Es | 0.320 | 0.549 | 0.255 | 1.3e-06 | |
| UNIPROTKB|Q71XT9 | 319 | LMOf2365_2106 "Putative unchar | 0.446 | 0.680 | 0.230 | 9.8e-06 | |
| TAIR|locus:2079172 | 309 | AT3G47590 "AT3G47590" [Arabido | 0.341 | 0.537 | 0.277 | 5.6e-05 |
| TAIR|locus:2130604 AT4G17150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1560 (554.2 bits), Expect = 3.2e-162, Sum P(2) = 3.2e-162
Identities = 295/407 (72%), Positives = 332/407 (81%)
Query: 1 MIDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF 60
MIDQFINFVIRPPRAEY+PDQYLWE++F L G KRQDLE+ N+RGH L+CSHY+PS
Sbjct: 10 MIDQFINFVIRPPRAEYDPDQYLWEKEFSLGGTKCKRQDLELTNSRGHTLRCSHYVPSSS 69
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120
EDTPLPCV+YCHGNSGCRADANEA ++LLPSNIT+FTLDFSGSGLS+GDYVSLGWHEKD
Sbjct: 70 REDTPLPCVIYCHGNSGCRADANEAVMVLLPSNITVFTLDFSGSGLSEGDYVSLGWHEKD 129
Query: 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV 180
DLK VVSYLR + Q SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS+LFDLM+ELV
Sbjct: 130 DLKTVVSYLRNSNQVSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSNLFDLMMELV 189
Query: 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240
DVYKIRLPKFTVK+AVQYMRR+IQKKAKF+IMDLNC+K++PKTFIPALFGHAS DKFI+
Sbjct: 190 DVYKIRLPKFTVKVAVQYMRRIIQKKAKFNIMDLNCVKVSPKTFIPALFGHASGDKFIQP 249
Query: 241 RHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYY 300
HSDLI YAGDKNIIKFDGDHNSSRPQ YYDSV +FFYNVL PP I S++S K E YY
Sbjct: 250 HHSDLILKCYAGDKNIIKFDGDHNSSRPQSYYDSVLVFFYNVLRPPPISSSYSSKLESYY 309
Query: 301 DLGALKFGASMDQSLLYEIITGLRCXXXXXXXXXXXXXXILTAKPVDELLSEAVPIASKE 360
LG + +D+S LYEII+GLR LT KP +ELLSEA+P+ +
Sbjct: 310 SLGDVNSATGLDESFLYEIISGLRSACIDVASSSSAPPAPLTTKPTNELLSEAMPMIDTD 369
Query: 361 NSAV-----NEDEPSSFQDKLSGLSEECCSYTSSNRESWGRCSSLGG 402
V N D+P +F+ K EE CS+TSSNRESWGRCSSLGG
Sbjct: 370 TVLVEDNDHNVDDPENFEGKRIDQFEEGCSFTSSNRESWGRCSSLGG 416
|
|
| TAIR|locus:2129585 AT4G14290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1138 (405.7 bits), Expect = 1.9e-115, P = 1.9e-115
Identities = 206/304 (67%), Positives = 250/304 (82%)
Query: 2 IDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFP 61
++Q +NFVIRPPRAEYNP+ L E++F+L GR Y+R+DLE++N RG +LQCSHYMP P
Sbjct: 1 MEQLVNFVIRPPRAEYNPEHDLLEQEFLLKGRWYQRKDLEVKNIRGDILQCSHYMPVERP 60
Query: 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD 121
ED PLPCV+YCHGNSGCRADA+EAA++LLPSNIT+FTLDFSGSGLS G++V+LGW+EKDD
Sbjct: 61 EDRPLPCVIYCHGNSGCRADASEAAIVLLPSNITIFTLDFSGSGLSGGEHVTLGWNEKDD 120
Query: 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVD 181
LK VV YLR + S IGLWGRSMGAVTSL+YGAEDPSIA MVLDS FSDL DLM+ELVD
Sbjct: 121 LKAVVEYLRTDGNVSLIGLWGRSMGAVTSLMYGAEDPSIAAMVLDSPFSDLVDLMMELVD 180
Query: 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241
YK RLPKFT+K A+QYMRR +QKKA F+I DLN +K+A F+P LFGHA +D FI+
Sbjct: 181 TYKFRLPKFTIKFAIQYMRRAVQKKANFNITDLNTIKVAKSCFVPVLFGHAVDDDFIQPH 240
Query: 242 HSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPS-THSIKAEKYY 300
HS+ I+ AY GDKNIIKFDGDHNS RPQFY+DS++IFF+NVL PP++ T + Y+
Sbjct: 241 HSERIYEAYIGDKNIIKFDGDHNSPRPQFYFDSINIFFHNVLQPPEVVGPTFFDPVDDYF 300
Query: 301 DLGA 304
G+
Sbjct: 301 AKGS 304
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| TAIR|locus:2088085 AT3G23540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1128 (402.1 bits), Expect = 2.2e-114, P = 2.2e-114
Identities = 202/287 (70%), Positives = 243/287 (84%)
Query: 2 IDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFP 61
+DQ +NF+IRPPRAEY+P+ L E+ FM+ GR Y+R+DLE++N+RG VLQCSHYMP P
Sbjct: 1 MDQLVNFIIRPPRAEYDPEHDLLEKKFMMKGRWYQRKDLEVKNSRGDVLQCSHYMPVERP 60
Query: 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD 121
E PLPCV+YCHGNSGCRAD +EAA++LLPSNIT+FTLDFSGSGLS G++V+LGW+EKDD
Sbjct: 61 EGKPLPCVIYCHGNSGCRADGSEAAIVLLPSNITVFTLDFSGSGLSGGEHVTLGWNEKDD 120
Query: 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVD 181
LK VV +LR + S IGLWGRSMGAVTSL+YG EDPSIAGM+LDS FSDL DLM+ELVD
Sbjct: 121 LKAVVEFLRQDGNISLIGLWGRSMGAVTSLMYGVEDPSIAGMILDSPFSDLVDLMMELVD 180
Query: 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241
YK RLPKFTVK A+Q+MRR IQKKAKFDIM+LN +K+A +F+P LFGHA +D FIR
Sbjct: 181 TYKFRLPKFTVKFAIQFMRRAIQKKAKFDIMELNTIKVAKASFVPVLFGHALDDDFIRPH 240
Query: 242 HSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQI 288
HSD I+ AY GDKNIIKF GDHNS RP FY+DS++IFF+NVL PP++
Sbjct: 241 HSDRIYEAYVGDKNIIKFPGDHNSPRPPFYFDSINIFFHNVLQPPEV 287
|
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| DICTYBASE|DDB_G0295699 rsc11-2 "alpha/beta hydrolase fold-1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 149/294 (50%), Positives = 189/294 (64%)
Query: 3 DQFINFVIRPPRAEYNPDQYLWERDFMLAG--RSYKRQDLEIRNARGHVLQCSHYMPSPF 60
D N +IRPPR Y+ D L + F L ++Y R D E+ N RGH +QCSH+ S +
Sbjct: 140 DSLCNMIIRPPRYTYSLDD-LGPKAFSLGHPLKTYVRNDFELINPRGHSIQCSHFKQSEY 198
Query: 61 PED-TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEK 119
E PCV+YCHGNSGCR DA E LLP NIT+ DFSGSGLS G YVSLG+ EK
Sbjct: 199 WETGEKQPCVIYCHGNSGCRLDAMECVRTLLPMNITVLVFDFSGSGLSGGQYVSLGYFEK 258
Query: 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLEL 179
+D+ V+V +LR + S IGLWGRSMGAVTS+LY +DPSIAGMVLDS FS L+ + EL
Sbjct: 259 EDVGVIVKHLRDTGKISTIGLWGRSMGAVTSILYARDDPSIAGMVLDSPFSSLYKVAEEL 318
Query: 180 VDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIR 239
V +LPK + + ++ +R I+K+A FDI +L+ L +A + +IPALF H D F+R
Sbjct: 319 VHSAVQKLPKLMISLGLKMVRGSIKKRAHFDIKELDVLNIADQVYIPALFAHGESDNFVR 378
Query: 240 ARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHS 293
HS+ +F Y GDKN + G HNS RP F+ +SV IFF N L P Q S S
Sbjct: 379 PHHSEKLFEKYNGDKNRLLLKGGHNSERPNFFLESVCIFFQNTLKPNQDDSNDS 432
|
|
| DICTYBASE|DDB_G0272791 rsc11-1 "alpha/beta hydrolase fold-1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 149/294 (50%), Positives = 189/294 (64%)
Query: 3 DQFINFVIRPPRAEYNPDQYLWERDFMLAG--RSYKRQDLEIRNARGHVLQCSHYMPSPF 60
D N +IRPPR Y+ D L + F L ++Y R D E+ N RGH +QCSH+ S +
Sbjct: 140 DSLCNMIIRPPRYTYSLDD-LGPKAFSLGHPLKTYVRNDFELINPRGHSIQCSHFKQSEY 198
Query: 61 PED-TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEK 119
E PCV+YCHGNSGCR DA E LLP NIT+ DFSGSGLS G YVSLG+ EK
Sbjct: 199 WETGEKQPCVIYCHGNSGCRLDAMECVRTLLPMNITVLVFDFSGSGLSGGQYVSLGYFEK 258
Query: 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLEL 179
+D+ V+V +LR + S IGLWGRSMGAVTS+LY +DPSIAGMVLDS FS L+ + EL
Sbjct: 259 EDVGVIVKHLRDTGKISTIGLWGRSMGAVTSILYARDDPSIAGMVLDSPFSSLYKVAEEL 318
Query: 180 VDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIR 239
V +LPK + + ++ +R I+K+A FDI +L+ L +A + +IPALF H D F+R
Sbjct: 319 VHSAVQKLPKLMISLGLKMVRGSIKKRAHFDIKELDVLNIADQVYIPALFAHGESDNFVR 378
Query: 240 ARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLHPPQIPSTHS 293
HS+ +F Y GDKN + G HNS RP F+ +SV IFF N L P Q S S
Sbjct: 379 PHHSEKLFEKYNGDKNRLLLKGGHNSERPNFFLESVCIFFQNTLKPNQDDSNDS 432
|
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| UNIPROTKB|Q81MC1 BAS4015 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 59/233 (25%), Positives = 108/233 (46%)
Query: 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITL 96
++++ I + G+ L +Y+P+ D +++CHG + + ++ + A + L +
Sbjct: 56 KEEIHIPSQFGYDLH-GYYIPA----DHSNKFMIFCHGVTVNKMNSVKYARLFLNRGYNV 110
Query: 97 FTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS-RIGLWGRSMGAVTSLLY-G 154
D G + G S G++EK DLK VV +L+ T+ +G+ G SMGA T L Y G
Sbjct: 111 VIYDHRRHGKTGGKTTSYGYYEKHDLKSVVDWLKSRFGTNITLGIHGESMGAATLLQYAG 170
Query: 155 AEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDL 214
+ + D FSD + + + V + LPK+ + +V ++ +
Sbjct: 171 LVEDGADFYIADCPFSDFYGQLQHRLKV-EFHLPKWPLLPLANAFLKVRDGYTIREVSPI 229
Query: 215 NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI-IKFDGDHNSS 266
+C+K P LF H+ +D +I A + ++ A +K + I G H S
Sbjct: 230 DCIKNINN---PVLFIHSKDDDYILADMTKALYEAKENNKQLYIAEHGAHACS 279
|
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| TIGR_CMR|BA_4328 BA_4328 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 59/233 (25%), Positives = 108/233 (46%)
Query: 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITL 96
++++ I + G+ L +Y+P+ D +++CHG + + ++ + A + L +
Sbjct: 56 KEEIHIPSQFGYDLH-GYYIPA----DHSNKFMIFCHGVTVNKMNSVKYARLFLNRGYNV 110
Query: 97 FTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS-RIGLWGRSMGAVTSLLY-G 154
D G + G S G++EK DLK VV +L+ T+ +G+ G SMGA T L Y G
Sbjct: 111 VIYDHRRHGKTGGKTTSYGYYEKHDLKSVVDWLKSRFGTNITLGIHGESMGAATLLQYAG 170
Query: 155 AEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDL 214
+ + D FSD + + + V + LPK+ + +V ++ +
Sbjct: 171 LVEDGADFYIADCPFSDFYGQLQHRLKV-EFHLPKWPLLPLANAFLKVRDGYTIREVSPI 229
Query: 215 NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI-IKFDGDHNSS 266
+C+K P LF H+ +D +I A + ++ A +K + I G H S
Sbjct: 230 DCIKNINN---PVLFIHSKDDDYILADMTKALYEAKENNKQLYIAEHGAHACS 279
|
|
| UNIPROTKB|P77538 yfhR "predicted peptidase" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 17 YNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF-PEDTPLPCVVYCHGN 75
Y PD ++ D + + +E G LQ ++PS P D + +++ HGN
Sbjct: 35 YYPDDKIYGPD------PWSAESVEFTAKDGTRLQ-GWFIPSSTGPADNAIATIIHAHGN 87
Query: 76 SGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ 134
+G A+ V LP N +F D+ G G S G G + + V R +
Sbjct: 88 AG-NMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVN 146
Query: 135 TSRIGLWGRSMGAVTSL-LYGAED-PSIAGMVLDSAFSDLFDLMLELV 180
R+ L+G+S+G L + G D I ++LDS F+ + +++
Sbjct: 147 PQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMI 194
|
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| UNIPROTKB|Q71XT9 LMOf2365_2106 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] | Back alignment and assigned GO terms |
|---|
Score = 131 (51.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 54/234 (23%), Positives = 99/234 (42%)
Query: 55 YMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114
Y+ + P +T + G SG A A + + D G S+G+ +
Sbjct: 88 YLAADKPSNTTIILAHGYRGKSGKVEMAGLARMYHEKFGYNVLMPDARAHGKSEGENIGF 147
Query: 115 GWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSD 171
GW E KD ++ + + N ++I L G SMG+ T L+ E P + ++ D ++
Sbjct: 148 GWPERKDYVQWIDQVIDKNGTDTQIALHGVSMGSSTVLMTSGEKLPKQVKSIIADCGYTS 207
Query: 172 L-FDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFG 230
+ +L +L ++ LPKF + + + K F + + + KT +P +
Sbjct: 208 MDAELSYQLKAMF--HLPKFPIIPTASLINKF---KEGFFFSEASAVDAVAKTDVPIFYI 262
Query: 231 HASEDKFIRARHSDLIF---NAYAGDKNIIKFDGDHNSS---RPQFYYDSVSIF 278
H D F+ D ++ N+Y +K I+K +H + P+ Y + V F
Sbjct: 263 HGDADAFVPTNMVDELYKATNSYK-EKWIVK-GAEHGQAFTVDPKTYEEKVRQF 314
|
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| TAIR|locus:2079172 AT3G47590 "AT3G47590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 124 (48.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 50/180 (27%), Positives = 79/180 (43%)
Query: 69 VVYCHGNSGCRADA--NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVV 125
VV CHG +++ N A + I+ F DFSG+G S+G + + HE DDL V
Sbjct: 84 VVLCHGFRSNKSNQIMNNVAAAIQKEGISAFRFDFSGNGESEGSFYYGNYNHEADDLHSV 143
Query: 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVD---V 182
V Y + I L G S G LLY ++ + ++ S DL + E + +
Sbjct: 144 VQYFSNKNRVVPIIL-GHSKGGDVVLLYASKYHDVRNVINLSGRYDLKKGIRERLGEDFL 202
Query: 183 YKIRLPKFTV----KMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFI 238
+I+ F K + + + + DI + CLK+ + + L H SED+ I
Sbjct: 203 ERIKQQGFIDVGDGKSGYRVTEKSLMDRLSTDIHEA-CLKIDKECRV--LTVHGSEDEVI 259
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00011847001 | SubName- Full=Chromosome undetermined scaffold_342, whole genome shotgun sequence; (488 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 486 | |||
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 4e-12 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 2e-09 | |
| COG1073 | 299 | COG1073, COG1073, Hydrolases of the alpha/beta sup | 5e-07 | |
| pfam02129 | 265 | pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptida | 1e-06 | |
| COG0412 | 236 | COG0412, COG0412, Dienelactone hydrolase and relat | 0.001 | |
| COG3458 | 321 | COG3458, COG3458, Acetyl esterase (deacetylase) [S | 0.001 | |
| PHA02857 | 276 | PHA02857, PHA02857, monoglyceride lipase; Provisio | 0.003 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 0.004 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 4e-12
Identities = 38/197 (19%), Positives = 62/197 (31%), Gaps = 54/197 (27%)
Query: 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSY 128
VV HG G A L + +D+ G G S G D + V++
Sbjct: 2 VVLLHGAGGDPEAYAPLARALASRGYNVVAVDYPGHGASLG---------APDAEAVLAD 52
Query: 129 LRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLP 188
+ RI L G S+G +LL A DP + V+ +A L D+ K+
Sbjct: 53 APLD--PERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDA----LDDLAKLT-- 104
Query: 189 KFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFN 248
+P L H + D + ++ +
Sbjct: 105 ------------------------------------VPVLIIHGTRDGVVPPEEAEALAA 128
Query: 249 AYAGDKNIIKFDG-DHN 264
A G ++ +G H+
Sbjct: 129 ALPGPAELVVIEGAGHS 145
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-09
Identities = 35/186 (18%), Positives = 61/186 (32%), Gaps = 25/186 (13%)
Query: 69 VVYCHGNSGCRADANEAAVI-LLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVS 127
VV HG G + L + + D G G SDG + +DD + +
Sbjct: 1 VVLLHGAGGSAESW--RPLAEALAAGYRVLAPDLPGHGDSDGPP-RTPYSLEDDAADLAA 57
Query: 128 YLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIR 186
L + L G S+G +L A P +AG+VL S + +L
Sbjct: 58 LLD-ALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPLRDLEELLA-------- 108
Query: 187 LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLI 246
+ + ++D + + + +P L H +D + + +
Sbjct: 109 -----------ADAAALLALLRAALLDADLREALARLTVPVLVIHGEDDPLVPPEAARRL 157
Query: 247 FNAYAG 252
A G
Sbjct: 158 AEALPG 163
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|223999 COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.9 bits (121), Expect = 5e-07
Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 24/202 (11%)
Query: 69 VVYCHGNSGCRADANEAAVILLPSN-ITLFTLDFSGSGLSDGDYVSLGWHEK-DDLKVVV 126
G + A + + +L + D+ G S G + G ++
Sbjct: 91 GGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALL 150
Query: 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIR 186
++ SRI +WG S+G +LL +P +A EL+D
Sbjct: 151 AWGPTRLDASRIVVWGESLGGALALLLLGANPELAR---------------ELIDYLITP 195
Query: 187 LPKFTVKMAVQYMRRVIQKKAKFDIMDL--NCLKLAPKTFIPALFGHASEDKFIRARHSD 244
+ + + + ++D + K++P P L H D+ + R ++
Sbjct: 196 GGFAPLPAPEAPLDTLPLRAVLLLLLDPFDDAEKISP---RPVLLVHGERDEVVPLRDAE 252
Query: 245 LIFNAYAGDKNIIKF--DGDHN 264
++ A + F G H
Sbjct: 253 DLYEAARERPKKLLFVPGGGHI 274
|
Length = 299 |
| >gnl|CDD|216890 pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family) | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 103 GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS-RIGLWGRSMGAVTSLLYGAED-PSI 160
G+G S+G + G E D K V+ +L G + ++G+ G S T L A P +
Sbjct: 61 GTGGSEGVFTVGGPQEVADGKDVIDWLAGQPWCNGKVGMTGISYLGTTQLAAAATGPPGL 120
Query: 161 AGMVLDSAFSDLFD 174
+ +SA SDL+D
Sbjct: 121 KAIAPESAISDLYD 134
|
Length = 265 |
| >gnl|CDD|223489 COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 27/127 (21%), Positives = 39/127 (30%), Gaps = 21/127 (16%)
Query: 56 MPSPFPEDTPLPCVVYCHGNSG--------CRADANEAAVILLPSNITLFTLDFSGSGLS 107
+ P V+ H G R A V+L P L+ + +
Sbjct: 17 YLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPD---LYGRQGDPTDIE 73
Query: 108 D-------GDYVSLGWHEK-DDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAED 157
D G + E D+ + YL Q RIG+ G MG +LL
Sbjct: 74 DEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133
Query: 158 PSIAGMV 164
P + V
Sbjct: 134 PEVKAAV 140
|
Length = 236 |
| >gnl|CDD|225989 COG3458, COG3458, Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 53/229 (23%), Positives = 76/229 (33%), Gaps = 44/229 (19%)
Query: 59 PFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD---GDYV--- 112
P E LP VV HG G + ++ + + +F +D G G S D
Sbjct: 76 PRHEKGKLPAVVQFHGYGGRGGEWHDM-LHWAVAGYAVFVMDVRGQGSSSQDTADPPGGP 134
Query: 113 -SLGWHEK---------------DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYG 154
G+ + D V L + RIG+ G S G +L
Sbjct: 135 SDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAA 194
Query: 155 AEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK------ 208
A DP I +V D F F +EL P + Y +R K+A+
Sbjct: 195 ALDPRIKAVVADYPFLSDFPRAIELATEG----PYDEI---QTYFKRHDPKEAEVFETLS 247
Query: 209 -FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI 256
FDI++ LA + +P L D +NA K I
Sbjct: 248 YFDIVN-----LAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTI 291
|
Length = 321 |
| >gnl|CDD|165193 PHA02857, PHA02857, monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.003
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Query: 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSG 103
N + C ++ P +P+ V HG E A + I +F+ D G
Sbjct: 7 NLDNDYIYCKYWKPITYPK----ALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIG 62
Query: 104 SGLSDGDYVSL---GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSI 160
G S+G+ + + G + +D ++ VV+ + L G SMGA S+L ++P++
Sbjct: 63 HGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVP-VFLLGHSMGATISILAAYKNPNL 121
Query: 161 -AGMVLDS 167
M+L S
Sbjct: 122 FTAMILMS 129
|
Length = 276 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.8 bits (89), Expect = 0.004
Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 8/114 (7%)
Query: 65 PLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL 122
P +V HG G + + L + + D G G SD SL + DDL
Sbjct: 20 GGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYA-DDL 78
Query: 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-SIAGMVLDSAFSDLFDL 175
++ L K L G SMG +L P + G+VL L
Sbjct: 79 AALLDALGLEKVV----LVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLL 128
|
Length = 282 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 486 | |||
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.95 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.94 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.94 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.94 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.93 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.92 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.92 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.91 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.91 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.91 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.9 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.9 | |
| PLN02511 | 388 | hydrolase | 99.9 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.9 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.9 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.89 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.89 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.89 | |
| PRK10566 | 249 | esterase; Provisional | 99.89 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.88 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.88 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.88 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.87 | |
| PLN02578 | 354 | hydrolase | 99.87 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.87 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.87 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.87 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.87 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.87 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.86 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.86 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.86 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.86 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.86 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.86 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.86 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.85 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.85 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.85 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.85 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.84 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.84 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.84 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.84 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.84 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.84 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.84 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.84 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.82 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.82 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.82 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.81 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.81 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.79 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.79 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.79 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.78 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.78 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.78 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.77 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.77 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.76 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.75 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.75 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.74 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.73 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.73 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.72 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.72 | |
| PRK10115 | 686 | protease 2; Provisional | 99.72 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.72 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.71 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.7 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.69 | |
| PLN00021 | 313 | chlorophyllase | 99.69 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.69 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.68 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.67 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.66 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.64 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.64 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.64 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.64 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.58 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.58 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.57 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.56 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.55 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.51 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.51 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.51 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.49 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.49 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.48 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.48 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.47 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.42 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.41 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.39 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.38 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.38 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.37 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.36 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.36 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.35 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.34 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.27 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 99.24 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.24 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.22 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.21 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.21 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.19 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.18 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.17 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.17 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.17 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.17 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.17 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.12 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.12 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.11 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 99.09 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.08 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.02 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.0 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.99 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 98.99 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.97 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.94 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.92 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.91 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.89 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.88 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.82 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 98.81 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.8 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.77 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.76 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.75 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.75 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.74 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.74 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 98.74 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 98.73 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.69 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.69 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.64 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.49 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.49 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.45 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.45 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.4 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.36 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.35 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.32 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.3 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.29 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.26 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.24 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.24 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.21 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.2 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 98.15 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.12 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.11 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.1 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 98.03 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.02 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 97.92 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.78 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 97.76 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.7 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.69 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.67 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.63 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 97.42 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.38 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 97.28 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.19 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.15 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 97.06 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.04 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 96.98 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 96.95 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 96.92 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.91 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 96.89 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 96.75 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 96.72 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.68 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 96.55 | |
| PLN02209 | 437 | serine carboxypeptidase | 96.49 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.37 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.29 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 95.95 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 95.77 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 95.58 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 95.52 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 95.46 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 95.37 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 95.1 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 95.1 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 95.01 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 94.94 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 94.89 | |
| PLN02454 | 414 | triacylglycerol lipase | 94.32 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 94.26 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 94.06 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 93.91 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 93.64 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 93.51 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 93.46 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 92.29 | |
| PLN02408 | 365 | phospholipase A1 | 92.28 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 92.1 | |
| PLN00413 | 479 | triacylglycerol lipase | 91.33 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 91.32 | |
| PLN02571 | 413 | triacylglycerol lipase | 91.02 | |
| PLN02162 | 475 | triacylglycerol lipase | 90.99 | |
| PLN02934 | 515 | triacylglycerol lipase | 90.87 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 90.11 | |
| PLN02310 | 405 | triacylglycerol lipase | 89.54 | |
| PLN02847 | 633 | triacylglycerol lipase | 89.35 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 89.26 | |
| PLN02324 | 415 | triacylglycerol lipase | 89.26 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 89.11 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 88.39 | |
| PLN02802 | 509 | triacylglycerol lipase | 88.24 | |
| PLN02761 | 527 | lipase class 3 family protein | 87.53 | |
| PLN02719 | 518 | triacylglycerol lipase | 87.42 | |
| PLN02753 | 531 | triacylglycerol lipase | 87.34 | |
| PF09994 | 277 | DUF2235: Uncharacterized alpha/beta hydrolase doma | 85.52 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 85.11 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 85.11 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 85.03 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 84.38 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 82.06 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 81.7 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 81.16 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 80.58 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 80.22 |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=223.92 Aligned_cols=241 Identities=15% Similarity=0.137 Sum_probs=175.4
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC-CCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSL 114 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~-G~S~~~~~~~ 114 (486)
.+.+..+...||..|.+++..|.. ....+.++||++||+++....+..++++|+++||+|+.+|+||+ |.|+|.+...
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~-~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKE-NSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCcc-cCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 345666888999999999988853 23456789999999999887789999999999999999999987 9999877544
Q ss_pred Ccc-hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHH
Q 011425 115 GWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVK 193 (486)
Q Consensus 115 ~~~-~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~ 193 (486)
... ...|+.++++|+++. ...+|+|+||||||.+++.+|... +++++|+.+|+.++.+.+..........+|.....
T Consensus 87 t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp 164 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELP 164 (307)
T ss_pred cccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHHHHHHhhhcccccCcccccc
Confidence 322 278999999999886 467899999999999997777644 49999999999998876665333211111211110
Q ss_pred HHH-----HH-HHHHHhhhhccccc-ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-CCcEEEEeCC-CCC
Q 011425 194 MAV-----QY-MRRVIQKKAKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHN 264 (486)
Q Consensus 194 ~~~-----~~-~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~l~~~~g-gH~ 264 (486)
... .. ....+.....+.+. ...+...+.++++|+|+|||..|.+||++.+..+++.++ .++++++++| +|.
T Consensus 165 ~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 165 EDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred cccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc
Confidence 000 00 01111111112111 234556677888999999999999999999999999986 5789999998 999
Q ss_pred CCChHHHHHHHHHHHHHh
Q 011425 265 SSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 265 ~~~p~~~~~~I~~FL~~~ 282 (486)
+...--+ +.+|.+..
T Consensus 245 l~~~~~~---~~~~~~~~ 259 (307)
T PRK13604 245 LGENLVV---LRNFYQSV 259 (307)
T ss_pred cCcchHH---HHHHHHHH
Confidence 8754333 34455444
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=227.24 Aligned_cols=250 Identities=20% Similarity=0.284 Sum_probs=168.0
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh-hHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC-CC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LG 115 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~-~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-~~ 115 (486)
+...|...||..|++..|.|.+ ...++++|||+||++.+.. .|..++..|+.+||+|+++|+||||.|.+.... ..
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~--~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 110 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSS--SSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPN 110 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCC--CCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCC
Confidence 5666888899999999998853 2246789999999986643 456677789889999999999999999753321 12
Q ss_pred cc-hHHHHHHHHHHHHhcC--CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH------HHHHHHHHHhh
Q 011425 116 WH-EKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELVDVYKI 185 (486)
Q Consensus 116 ~~-~~~Dl~~~i~~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~------~~~~~~~~~~~ 185 (486)
+. .++|+.++++++.... ...+++|+||||||.+++.++..+|+ |+++|+++|...... ...........
T Consensus 111 ~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (330)
T PLN02298 111 VDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVAR 190 (330)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHH
Confidence 22 2788999999997642 23579999999999999999999998 999999998653211 01111111111
Q ss_pred hCCchhH-------HHH--HHHHHHHHh-hhhccc----------cc--ccchhhhCCCCCCCEEEEEeCCCCCCCHHHH
Q 011425 186 RLPKFTV-------KMA--VQYMRRVIQ-KKAKFD----------IM--DLNCLKLAPKTFIPALFGHASEDKFIRARHS 243 (486)
Q Consensus 186 ~~p~~~~-------~~~--~~~~~~~~~-~~~~~~----------~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 243 (486)
..+.... ... ......... ....+. .. .......+.++++|+||++|.+|.++|++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~ 270 (330)
T PLN02298 191 FLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVS 270 (330)
T ss_pred HCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHH
Confidence 1111000 000 000000000 000000 00 0012345678899999999999999999999
Q ss_pred HHHHHHcC-CCcEEEEeCC-CCCCC--Ch----HHHHHHHHHHHHHhcCCCCCC
Q 011425 244 DLIFNAYA-GDKNIIKFDG-DHNSS--RP----QFYYDSVSIFFYNVLHPPQIP 289 (486)
Q Consensus 244 ~~l~~~l~-~~~~l~~~~g-gH~~~--~p----~~~~~~I~~FL~~~l~~~~~~ 289 (486)
+.+++.++ ..++++++++ +|... .| +.+.+.|.+||.+.+.+...|
T Consensus 271 ~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 271 RALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred HHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999876 4578999998 89865 34 457788899999987654433
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=218.79 Aligned_cols=237 Identities=17% Similarity=0.263 Sum_probs=165.6
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC-Cc-chH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-GW-HEK 119 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~-~~-~~~ 119 (486)
+.+.||..|.+.+|.|. ..++++|+++||++++...|..++..|.+.||.|+++|+||||.|++..... .+ ..+
T Consensus 5 ~~~~~g~~l~~~~~~~~----~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPI----TYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred eecCCCCEEEEEeccCC----CCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 55679999999999874 3456888888999999999999999999999999999999999998643222 22 126
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH-----HHHHH-HHHHh-hhC-Cch
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-----LMLEL-VDVYK-IRL-PKF 190 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~-----~~~~~-~~~~~-~~~-p~~ 190 (486)
+|+..++++++......+++|+||||||.+++.+|..+|+ |+++|+++|...... .+... ...+. ... ..+
T Consensus 81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T PHA02857 81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKL 160 (276)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCC
Confidence 7777888877766556789999999999999999999998 899999998754211 11111 01010 000 000
Q ss_pred hHHHHHH---HHHHHHhhhhc----------ccc--cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcE
Q 011425 191 TVKMAVQ---YMRRVIQKKAK----------FDI--MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKN 255 (486)
Q Consensus 191 ~~~~~~~---~~~~~~~~~~~----------~~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~ 255 (486)
....... ........... ... ...+....+.++++|+|+++|++|.++|++.+..+.+.+....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~ 240 (276)
T PHA02857 161 CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNRE 240 (276)
T ss_pred CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCce
Confidence 0000000 00000000000 000 00122356778999999999999999999999999998866678
Q ss_pred EEEeCC-CCCCC--C---hHHHHHHHHHHHHHh
Q 011425 256 IIKFDG-DHNSS--R---PQFYYDSVSIFFYNV 282 (486)
Q Consensus 256 l~~~~g-gH~~~--~---p~~~~~~I~~FL~~~ 282 (486)
+.++++ ||... . .+++++.+.+||+++
T Consensus 241 ~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 241 IKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 888887 99876 2 467889999999875
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-25 Score=224.80 Aligned_cols=247 Identities=20% Similarity=0.328 Sum_probs=166.5
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
+..++..+.+.||.+|.+..|.|. ...++++|||+||++++... |..++..|+++||.|+++|+||||.|++....
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~---~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPE---NSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecC---CCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence 334566677899999999999985 23567999999999988665 46788889888999999999999999864321
Q ss_pred -CCcch-HHHHHHHHHHHHhcC--CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH------HHHHHHHHH
Q 011425 114 -LGWHE-KDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVDV 182 (486)
Q Consensus 114 -~~~~~-~~Dl~~~i~~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~------~~~~~~~~~ 182 (486)
..+.. ++|+.++++.+.... ...+++|+||||||++++.++..+|+ |+++|+++|..... .........
T Consensus 136 ~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 136 IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHH
Confidence 12222 667777777775432 23579999999999999999999998 99999999864321 111111111
Q ss_pred HhhhCCch------h-HHH-HHHHHHHHHhhh--hcc----------ccc--ccchhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 183 YKIRLPKF------T-VKM-AVQYMRRVIQKK--AKF----------DIM--DLNCLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 183 ~~~~~p~~------~-~~~-~~~~~~~~~~~~--~~~----------~~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
.....+.. . ... ............ ..+ ... ..+....+.++++|+|+|+|++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 11001100 0 000 000000000000 000 000 0122345778999999999999999999
Q ss_pred HHHHHHHHHcC-CCcEEEEeCC-CCCCC--ChHH----HHHHHHHHHHHhcC
Q 011425 241 RHSDLIFNAYA-GDKNIIKFDG-DHNSS--RPQF----YYDSVSIFFYNVLH 284 (486)
Q Consensus 241 ~~~~~l~~~l~-~~~~l~~~~g-gH~~~--~p~~----~~~~I~~FL~~~l~ 284 (486)
..+..+++.+. .+.+++++++ ||... .|++ +++.|.+||++++.
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999885 3578889997 99876 4554 78889999998753
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=207.23 Aligned_cols=243 Identities=19% Similarity=0.342 Sum_probs=173.4
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh-hhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC-
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG- 115 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~-~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~- 115 (486)
..-.+.+.+|..|....|.|.. ..+++..|+++||+++.. ..|..++..|+..||.|+++|++|||.|+|......
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~--~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~ 105 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLS--GTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPS 105 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCC--CCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCc
Confidence 4456889999999999999964 236788999999999876 667779999999999999999999999997544332
Q ss_pred c-chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH------HHHHHHHHHhh
Q 011425 116 W-HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELVDVYKI 185 (486)
Q Consensus 116 ~-~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~------~~~~~~~~~~~ 185 (486)
+ ..++|+...++.++.+... -+.+|+||||||.+++.++.++|. ..|+|+++|.....+ ....+......
T Consensus 106 ~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~ 185 (313)
T KOG1455|consen 106 FDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSK 185 (313)
T ss_pred HHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHH
Confidence 1 2277888888876665433 689999999999999999999998 899999887653221 22222222222
Q ss_pred hCCchhHHHHH--------H-HHHHHHhhh-----------hccccc--ccchhhhCCCCCCCEEEEEeCCCCCCCHHHH
Q 011425 186 RLPKFTVKMAV--------Q-YMRRVIQKK-----------AKFDIM--DLNCLKLAPKTFIPALFGHASEDKFIRARHS 243 (486)
Q Consensus 186 ~~p~~~~~~~~--------~-~~~~~~~~~-----------~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 243 (486)
.+|.+..-... + ..+...... ..+++. ..+....+.++++|++|+||++|.++.+..+
T Consensus 186 liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~S 265 (313)
T KOG1455|consen 186 LIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVS 265 (313)
T ss_pred hCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHH
Confidence 23332210000 0 000000000 000000 1144567889999999999999999999999
Q ss_pred HHHHHHcC-CCcEEEEeCC-CCCCC------ChHHHHHHHHHHHHHh
Q 011425 244 DLIFNAYA-GDKNIIKFDG-DHNSS------RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 244 ~~l~~~l~-~~~~l~~~~g-gH~~~------~p~~~~~~I~~FL~~~ 282 (486)
+.+++... .++++.+||| -|... +-+.+...|.+||+++
T Consensus 266 k~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 266 KELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999976 6899999999 78654 3467778888998865
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-23 Score=210.53 Aligned_cols=241 Identities=15% Similarity=0.148 Sum_probs=163.7
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC---
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS--- 113 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~--- 113 (486)
++...+...+|..|.+..|.|. .++++||++||++++...|..++..|+..||.|+++|+||||.|++....
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 104 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR 104 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC-----CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc
Confidence 3566777889999999998653 34679999999999988899999889999999999999999999753221
Q ss_pred ---CCcc-hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH-----HHHHH---HH
Q 011425 114 ---LGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLE---LV 180 (486)
Q Consensus 114 ---~~~~-~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~-----~~~~~---~~ 180 (486)
..+. .++|+.++++.+....+..+++++||||||.+++.+|..+|+ |+++|+++|..... ..... ..
T Consensus 105 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 184 (330)
T PRK10749 105 GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWA 184 (330)
T ss_pred CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHH
Confidence 1221 266777777776655456899999999999999999999998 99999999864311 01111 11
Q ss_pred HHHhh----------hCCch---------hHHHHHHHHHHHHhhhhc------c----cccc--cchhhhCCCCCCCEEE
Q 011425 181 DVYKI----------RLPKF---------TVKMAVQYMRRVIQKKAK------F----DIMD--LNCLKLAPKTFIPALF 229 (486)
Q Consensus 181 ~~~~~----------~~p~~---------~~~~~~~~~~~~~~~~~~------~----~~~~--~~~~~~l~~i~~PvLi 229 (486)
..... ..... .......+.......... + .... ......+.++++|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Li 264 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLL 264 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEE
Confidence 10000 00000 001111111111111000 0 0000 0123456789999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHcC------CCcEEEEeCC-CCCCC--C---hHHHHHHHHHHHHHh
Q 011425 230 GHASEDKFIRARHSDLIFNAYA------GDKNIIKFDG-DHNSS--R---PQFYYDSVSIFFYNV 282 (486)
Q Consensus 230 i~G~~D~~vp~~~~~~l~~~l~------~~~~l~~~~g-gH~~~--~---p~~~~~~I~~FL~~~ 282 (486)
|+|++|.+++++.+..+++.++ ..++++++++ ||... . .+.+.+.|.+||+++
T Consensus 265 i~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 265 LQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999999999998988764 2457899998 99865 2 367888899998764
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-24 Score=200.02 Aligned_cols=217 Identities=23% Similarity=0.361 Sum_probs=173.5
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCC
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLG 115 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~ 115 (486)
.+.+..++..|..+....+.|. ....++|+++||...+......+...|.. -+++|+.+||+|+|.|.|.+.+.+
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~----~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n 110 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPP----EAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERN 110 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCc----cccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccccc
Confidence 3556778889999999888875 23579999999998777755555555544 379999999999999999998875
Q ss_pred cchHHHHHHHHHHHHhcCC-CCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHH
Q 011425 116 WHEKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKM 194 (486)
Q Consensus 116 ~~~~~Dl~~~i~~l~~~~~-~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~ 194 (486)
. .+|+.++.+||++.++ .++|+|+|+|+|...++.+|++.| ++++||.+|+.+..+.+.......
T Consensus 111 ~--y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~~~~~~----------- 176 (258)
T KOG1552|consen 111 L--YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFPDTKTT----------- 176 (258)
T ss_pred c--hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhccCcceE-----------
Confidence 4 6999999999999984 689999999999999999999999 999999999998766543321100
Q ss_pred HHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-ChHHHH
Q 011425 195 AVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQFYY 272 (486)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-~p~~~~ 272 (486)
+....+.....+..|++|+|++||++|++|+..+..++++.++...+-.+..| ||... ...++.
T Consensus 177 --------------~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi 242 (258)
T KOG1552|consen 177 --------------YCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYI 242 (258)
T ss_pred --------------EeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHH
Confidence 00001112467778999999999999999999999999999987655555555 88866 567899
Q ss_pred HHHHHHHHHhcCC
Q 011425 273 DSVSIFFYNVLHP 285 (486)
Q Consensus 273 ~~I~~FL~~~l~~ 285 (486)
+.+..|+......
T Consensus 243 ~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 243 EHLRRFISSVLPS 255 (258)
T ss_pred HHHHHHHHHhccc
Confidence 9999999887654
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-23 Score=212.66 Aligned_cols=244 Identities=18% Similarity=0.244 Sum_probs=170.4
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC-C
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-G 115 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~-~ 115 (486)
.....+..++|..+.+..|.|. ...++++|||+||++++...|..++..|+++||.|+++|+||||.|++..... .
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~---~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPA---AGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCC---CCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 3566788899999999999885 23457899999999999888999999999999999999999999998653221 2
Q ss_pred cc-hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC----CccEEEEcCCccCHHH---HHHHHHHHHhhhC
Q 011425 116 WH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFSDLFD---LMLELVDVYKIRL 187 (486)
Q Consensus 116 ~~-~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p----~v~~lVl~sp~~~~~~---~~~~~~~~~~~~~ 187 (486)
+. ..+|+.++++++.......+++|+||||||.+++.++. +| .|+++|+.+|...... ........+....
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 21 26889999999987655568999999999999998765 44 3899999998754321 1111111111111
Q ss_pred CchhH--------------HHHHHHHHH-H-----Hhhhhcccccc--cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHH
Q 011425 188 PKFTV--------------KMAVQYMRR-V-----IQKKAKFDIMD--LNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (486)
Q Consensus 188 p~~~~--------------~~~~~~~~~-~-----~~~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 245 (486)
|.+.. ......... . +.....+.... ......+.++++|+|++||++|.++|++.++.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 11100 000000000 0 00000000000 01234567899999999999999999999999
Q ss_pred HHHHcCC-CcEEEEeCC-CCCCC---ChHHHHHHHHHHHHHhcC
Q 011425 246 IFNAYAG-DKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 246 l~~~l~~-~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~~~l~ 284 (486)
+++.+.. .++++++++ +|... .++++++.+.+||..++.
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 9998654 578999998 79854 578999999999998874
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-23 Score=203.25 Aligned_cols=229 Identities=13% Similarity=0.134 Sum_probs=152.2
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl 122 (486)
..+|.++++..+. ++...++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.......+.. ++++
T Consensus 8 ~~~~~~~~~~~~~-----~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~ 81 (276)
T TIGR02240 8 DLDGQSIRTAVRP-----GKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLA 81 (276)
T ss_pred ccCCcEEEEEEec-----CCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHH
Confidence 3578888886541 122347899999999999999999988876 69999999999999975433222221 4445
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH------HHHHHHHH--HHhhhCC--chh
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVD--VYKIRLP--KFT 191 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~------~~~~~~~~--~~~~~~p--~~~ 191 (486)
.++++.+ +.++++|+||||||.+++.+|.++|+ |+++|++++..... ........ .+..... ...
T Consensus 82 ~~~i~~l----~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (276)
T TIGR02240 82 ARMLDYL----DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIA 157 (276)
T ss_pred HHHHHHh----CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchh
Confidence 5555544 56899999999999999999999998 99999998765321 01000000 0000000 000
Q ss_pred H----------HHHHHHHHHHHhhhhc-------ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCc
Q 011425 192 V----------KMAVQYMRRVIQKKAK-------FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDK 254 (486)
Q Consensus 192 ~----------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~ 254 (486)
. ................ ......+....+.++++|+|+|+|+.|++++++.+..+.+.++. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-~ 236 (276)
T TIGR02240 158 PDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-A 236 (276)
T ss_pred hhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-C
Confidence 0 0000000000000000 00011122345678999999999999999999999999998865 5
Q ss_pred EEEEeCCCCCCC--ChHHHHHHHHHHHHHhc
Q 011425 255 NIIKFDGDHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 255 ~l~~~~ggH~~~--~p~~~~~~I~~FL~~~l 283 (486)
+++++++||+.. .|+++++.|.+|+.+.-
T Consensus 237 ~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 237 ELHIIDDGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred EEEEEcCCCchhhccHHHHHHHHHHHHHHhh
Confidence 677788899866 78999999999998754
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-22 Score=207.76 Aligned_cols=232 Identities=17% Similarity=0.197 Sum_probs=163.1
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh-hhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~-~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
..+.+.|...+|..|.++++.|. ..++.|+||++||+++.. ..|..++..|+++||+|+++|+||+|.|.+.....
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~---~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~ 243 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPK---GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQ 243 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECC---CCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccc
Confidence 44788888889989999999996 235689999888888765 45667888999999999999999999997543211
Q ss_pred CcchHHHHHHHHHHHHhcC--CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHH--------HHHH
Q 011425 115 GWHEKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL--------VDVY 183 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~--------~~~~ 183 (486)
. ......++++++.... +..+|+++||||||++++.+|...|. |+++|+++|+.......... ...+
T Consensus 244 d--~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~l 321 (414)
T PRK05077 244 D--SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVL 321 (414)
T ss_pred c--HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHH
Confidence 1 1233467889998775 34799999999999999999998885 99999999876421100000 0000
Q ss_pred hhh--CCchhHHHHHHHHHHHHhhhhcccccccchhhh-CCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeC
Q 011425 184 KIR--LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKL-APKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD 260 (486)
Q Consensus 184 ~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ 260 (486)
... .+......+... ...+.. ..... ..++++|+|+|+|++|+++|++.++.+.+..+ +.++++++
T Consensus 322 a~~lg~~~~~~~~l~~~-------l~~~sl---~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-~~~l~~i~ 390 (414)
T PRK05077 322 ASRLGMHDASDEALRVE-------LNRYSL---KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-DGKLLEIP 390 (414)
T ss_pred HHHhCCCCCChHHHHHH-------hhhccc---hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-CCeEEEcc
Confidence 000 000000000000 001110 01111 25789999999999999999999998887774 45688888
Q ss_pred CCCCCCChHHHHHHHHHHHHHhc
Q 011425 261 GDHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 261 ggH~~~~p~~~~~~I~~FL~~~l 283 (486)
+.|....++.+.+.+.+||.+.+
T Consensus 391 ~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 391 FKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred CCCccCCHHHHHHHHHHHHHHHh
Confidence 87777789999999999998875
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=201.40 Aligned_cols=244 Identities=14% Similarity=0.120 Sum_probs=151.4
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCC
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~ 111 (486)
..++..+.+.+...+|..+... |... +.+..|+|||+||++++...|..++..|.+.||+|+++|+||||.|+...
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~-y~~~---G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~ 91 (302)
T PRK00870 16 DYPFAPHYVDVDDGDGGPLRMH-YVDE---GPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT 91 (302)
T ss_pred CCCCCceeEeecCCCCceEEEE-EEec---CCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 4445555677765566543322 2222 22246899999999999999999999998889999999999999997533
Q ss_pred CCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH-----HHHHHHHHHHhh
Q 011425 112 VSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLELVDVYKI 185 (486)
Q Consensus 112 ~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~-----~~~~~~~~~~~~ 185 (486)
....+ ..+++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++..... .....+.. +..
T Consensus 92 ~~~~~-~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~ 169 (302)
T PRK00870 92 RREDY-TYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRA-FSQ 169 (302)
T ss_pred CcccC-CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhc-ccc
Confidence 21111 123333333333333366899999999999999999999998 99999998642211 00100000 000
Q ss_pred hCCc--------------hhHHHHHHHHH--------HHHhhhhcc---c------ccccchhhhCCCCCCCEEEEEeCC
Q 011425 186 RLPK--------------FTVKMAVQYMR--------RVIQKKAKF---D------IMDLNCLKLAPKTFIPALFGHASE 234 (486)
Q Consensus 186 ~~p~--------------~~~~~~~~~~~--------~~~~~~~~~---~------~~~~~~~~~l~~i~~PvLii~G~~ 234 (486)
..+. ........+.. ......... . .........+.++++|+++|+|+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 249 (302)
T PRK00870 170 YSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDS 249 (302)
T ss_pred cCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCC
Confidence 0000 00000000000 000000000 0 000011234678999999999999
Q ss_pred CCCCCHHHHHHHHHHcCCCc--EEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 235 DKFIRARHSDLIFNAYAGDK--NIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 235 D~~vp~~~~~~l~~~l~~~~--~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
|.++|... ..+.+.+++.. .++++++ ||+.. .|+.+.+.|.+||.++
T Consensus 250 D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 250 DPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred CCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 99999866 77888776432 3677787 99976 7899999999999764
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=187.56 Aligned_cols=250 Identities=18% Similarity=0.363 Sum_probs=189.1
Q ss_pred cccccCCCCCCCCCcccccccccccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHH
Q 011425 7 NFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA 86 (486)
Q Consensus 7 ~~~~rp~~~~y~~~~~~~~~~~~~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~ 86 (486)
+.+..|+.+.=...+..-++++ +.+| +.+++.+.|..+|.++...- ..+.|+++++||..|+.......+
T Consensus 29 ~~LvYps~pqgsR~~vptP~~~---n~py--e~i~l~T~D~vtL~a~~~~~-----E~S~pTlLyfh~NAGNmGhr~~i~ 98 (300)
T KOG4391|consen 29 KTLVYPSFPQGSRENVPTPKEF---NMPY--ERIELRTRDKVTLDAYLMLS-----ESSRPTLLYFHANAGNMGHRLPIA 98 (300)
T ss_pred ceeeccCcccccccCCCCcccc---CCCc--eEEEEEcCcceeEeeeeecc-----cCCCceEEEEccCCCcccchhhHH
Confidence 4455666433233333344555 6677 78889999999999988762 248999999999999988877766
Q ss_pred HH-hccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccE
Q 011425 87 VI-LLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAG 162 (486)
Q Consensus 87 ~~-L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~ 162 (486)
.. +...+.+|+.++|||+|.|+|.+.+.+. .-|.+++++|+..+... .+++|+|.|+||.+|+.+|+++.+ +.+
T Consensus 99 ~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL--~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~ 176 (300)
T KOG4391|consen 99 RVFYVNLKMNVLIVSYRGYGKSEGSPSEEGL--KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISA 176 (300)
T ss_pred HHHHHHcCceEEEEEeeccccCCCCccccce--eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheee
Confidence 54 4455899999999999999999988876 47899999999998655 689999999999999999999887 999
Q ss_pred EEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH
Q 011425 163 MVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (486)
Q Consensus 163 lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (486)
+|+-+.+.+.......+...+. . .++....... .+.....+.....|.|+|.|.+|.+|||..
T Consensus 177 ~ivENTF~SIp~~~i~~v~p~~-------~----k~i~~lc~kn------~~~S~~ki~~~~~P~LFiSGlkDelVPP~~ 239 (300)
T KOG4391|consen 177 IIVENTFLSIPHMAIPLVFPFP-------M----KYIPLLCYKN------KWLSYRKIGQCRMPFLFISGLKDELVPPVM 239 (300)
T ss_pred eeeechhccchhhhhheeccch-------h----hHHHHHHHHh------hhcchhhhccccCceEEeecCccccCCcHH
Confidence 9999999886544332222111 1 1111111110 001224455778999999999999999999
Q ss_pred HHHHHHHcCC-CcEEEEeCC-CCCCC-ChHHHHHHHHHHHHHhcCC
Q 011425 243 SDLIFNAYAG-DKNIIKFDG-DHNSS-RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 243 ~~~l~~~l~~-~~~l~~~~g-gH~~~-~p~~~~~~I~~FL~~~l~~ 285 (486)
.+++++.++. .+.+..||+ .|+.. ..+.+++.|.+||.+....
T Consensus 240 Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 240 MRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred HHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhccC
Confidence 9999999874 567888886 79877 5789999999999988653
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-22 Score=203.24 Aligned_cols=268 Identities=17% Similarity=0.144 Sum_probs=169.0
Q ss_pred CCCCCCccccccccc---------ccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-H-H
Q 011425 15 AEYNPDQYLWERDFM---------LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-A-N 83 (486)
Q Consensus 15 ~~y~~~~~~~~~~~~---------~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~-~ 83 (486)
..|.|+.|+.+...+ .....|.++ .+...||..+.+..+.+.........|+||++||++++... | .
T Consensus 42 ~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re--~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~ 119 (388)
T PLN02511 42 RPYDAFPLLGNRHVETIFASFFRSLPAVRYRRE--CLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVR 119 (388)
T ss_pred CCccCCccCCCccHHHhhHHHhcCCCCCceeEE--EEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHH
Confidence 357777777666554 234556544 46678998888755433211123457899999999877543 4 4
Q ss_pred HHHHHhccCCeEEEEEcCCCCCCCCCCCCCC-CcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC---
Q 011425 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSL-GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS--- 159 (486)
Q Consensus 84 ~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~-~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~--- 159 (486)
.++..+.++||+|+++|+||||.|....... .....+|+.++++++...++..+++++||||||.+++.++.++++
T Consensus 120 ~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~ 199 (388)
T PLN02511 120 HMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCP 199 (388)
T ss_pred HHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCC
Confidence 5667777889999999999999997432211 112378999999999988766799999999999999999999885
Q ss_pred ccEEEEcCCccCHHHHHHHHHH----HHhh----hC--------------C-chhHHH------HHHHHHHHHhhhhccc
Q 011425 160 IAGMVLDSAFSDLFDLMLELVD----VYKI----RL--------------P-KFTVKM------AVQYMRRVIQKKAKFD 210 (486)
Q Consensus 160 v~~lVl~sp~~~~~~~~~~~~~----~~~~----~~--------------p-~~~~~~------~~~~~~~~~~~~~~~~ 210 (486)
|.++|+++++.++......+.. .+.. .+ + .+.... ..++..........+.
T Consensus 200 v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~ 279 (388)
T PLN02511 200 LSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFK 279 (388)
T ss_pred ceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCC
Confidence 7888887776654211100000 0000 00 0 000000 0000000000000111
Q ss_pred c-----cccchhhhCCCCCCCEEEEEeCCCCCCCHHHH-HHHHHHcCCCcEEEEeCC-CCCCC--ChHH------HHHHH
Q 011425 211 I-----MDLNCLKLAPKTFIPALFGHASEDKFIRARHS-DLIFNAYAGDKNIIKFDG-DHNSS--RPQF------YYDSV 275 (486)
Q Consensus 211 ~-----~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~-~~l~~~l~~~~~l~~~~g-gH~~~--~p~~------~~~~I 275 (486)
. ...+....+.+|++|+|+|+|.+|+++|.... ..+.+.+ ++..++++++ ||..+ .++. +.+.+
T Consensus 280 ~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~-p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i 358 (388)
T PLN02511 280 SVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN-PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVV 358 (388)
T ss_pred CHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC-CCEEEEECCCcceeccccCCCCCCCCccHHHHH
Confidence 0 11234457788999999999999999998754 3344444 4567887775 99866 3433 57889
Q ss_pred HHHHHHhcCC
Q 011425 276 SIFFYNVLHP 285 (486)
Q Consensus 276 ~~FL~~~l~~ 285 (486)
.+||......
T Consensus 359 ~~Fl~~~~~~ 368 (388)
T PLN02511 359 MEFLEALEEG 368 (388)
T ss_pred HHHHHHHHHh
Confidence 9999887643
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-23 Score=186.01 Aligned_cols=212 Identities=18% Similarity=0.238 Sum_probs=159.4
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
...||++||+.|+..+...+++.|.++||.|.++.|||||.....+...++.+ .+|+.+..++|.+. +.+.|.++|.|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEeec
Confidence 48999999999999999999999999999999999999999986666555443 68889999999866 56899999999
Q ss_pred chHHHHHHHHhcCCCccEEEEcCCccCHHH---HHHHHHH---HHhhhCCchhHHHHHHHHHHH----Hhhhhccccccc
Q 011425 145 MGAVTSLLYGAEDPSIAGMVLDSAFSDLFD---LMLELVD---VYKIRLPKFTVKMAVQYMRRV----IQKKAKFDIMDL 214 (486)
Q Consensus 145 mGG~lAl~~A~~~p~v~~lVl~sp~~~~~~---~~~~~~~---~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~ 214 (486)
|||.+++.+|..+| ++++|.+|++..... .+..+.. .+. .++..........+... ......+...-.
T Consensus 94 mGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~k-k~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~ 171 (243)
T COG1647 94 MGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAK-KYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIK 171 (243)
T ss_pred chhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHhh-hccCCCHHHHHHHHHHhhcchHHHHHHHHHHHH
Confidence 99999999999999 999999999876322 1111111 111 11111111221111111 111111111122
Q ss_pred chhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-CCcEEEEeCC-CCCCC---ChHHHHHHHHHHHH
Q 011425 215 NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHNSS---RPQFYYDSVSIFFY 280 (486)
Q Consensus 215 ~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~ 280 (486)
+....+..|..|++++.|.+|+.||.+.+..+++... .++++.++++ ||... +.+.+.+.|..||+
T Consensus 172 ~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 172 DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 4456677889999999999999999999999999875 5789999998 99866 67899999999986
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-21 Score=193.08 Aligned_cols=211 Identities=16% Similarity=0.150 Sum_probs=137.2
Q ss_pred CCcEEEEeCCCCCChhhHHH---HHHHhccCCeEEEEEcCCCCCCCCCCCCCC--CcchHHHHHHHHHHHHhcCCCCcEE
Q 011425 65 PLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSRIG 139 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~--~~~~~~Dl~~~i~~l~~~~~~~~i~ 139 (486)
..|+|||+||++++...|.. .+..+++.||+|+++|+||||.|+...... ....++++.++++.+ +.++++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 104 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAH 104 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCee
Confidence 45789999999988776654 345666779999999999999998543211 111245555555444 678999
Q ss_pred EEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH--------HHHHHHHHHHhh--------------hCCchhHHHHH
Q 011425 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--------DLMLELVDVYKI--------------RLPKFTVKMAV 196 (486)
Q Consensus 140 LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~--------~~~~~~~~~~~~--------------~~p~~~~~~~~ 196 (486)
++||||||.+++.+|.++|+ |+++|++++..... .........+.. ..+........
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELL 184 (282)
T ss_pred EEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHH
Confidence 99999999999999999997 99999988742100 000111100000 00000000000
Q ss_pred H-HHH----------HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCC
Q 011425 197 Q-YMR----------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHN 264 (486)
Q Consensus 197 ~-~~~----------~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~ 264 (486)
. .+. ..............+....+.++++|+|+++|++|.+++++.+..+++.++ +.+++++++ ||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-~~~~~~i~~agH~ 263 (282)
T TIGR03343 185 QGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-DAQLHVFSRCGHW 263 (282)
T ss_pred HhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC-CCEEEEeCCCCcC
Confidence 0 000 000000000111223345577899999999999999999999999988885 467778886 999
Q ss_pred CC--ChHHHHHHHHHHHH
Q 011425 265 SS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 265 ~~--~p~~~~~~I~~FL~ 280 (486)
.. .|+.+.+.|.+||.
T Consensus 264 ~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 264 AQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CcccCHHHHHHHHHHHhh
Confidence 76 78999999999986
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-22 Score=196.46 Aligned_cols=226 Identities=15% Similarity=0.174 Sum_probs=145.7
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~ 123 (486)
.+|.++.|..+ +..|+|||+||++++...|..++..|.+.+ +|+++|+||||.|+.......... ++|+.
T Consensus 14 ~~g~~i~y~~~--------G~g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~ 84 (295)
T PRK03592 14 VLGSRMAYIET--------GEGDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLD 84 (295)
T ss_pred ECCEEEEEEEe--------CCCCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 47888887765 245899999999999999999999998874 999999999999986543222211 34444
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH------HHHHHHHHHHhhhC---------
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVDVYKIRL--------- 187 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~------~~~~~~~~~~~~~~--------- 187 (486)
++++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++..... .........+....
T Consensus 85 ~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (295)
T PRK03592 85 AWFDAL----GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEE 160 (295)
T ss_pred HHHHHh----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccch
Confidence 444443 66899999999999999999999998 99999999743211 00111111111000
Q ss_pred --------Cc-----hhHHHHHHHHHH---------HHhhhhcccc----cc-----cchhhhCCCCCCCEEEEEeCCCC
Q 011425 188 --------PK-----FTVKMAVQYMRR---------VIQKKAKFDI----MD-----LNCLKLAPKTFIPALFGHASEDK 236 (486)
Q Consensus 188 --------p~-----~~~~~~~~~~~~---------~~~~~~~~~~----~~-----~~~~~~l~~i~~PvLii~G~~D~ 236 (486)
+. +.......+... .......... .. .+....+.++++|+|+|+|++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 240 (295)
T PRK03592 161 NVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGA 240 (295)
T ss_pred hhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCc
Confidence 00 000000000000 0000000000 00 01123456789999999999999
Q ss_pred CCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 237 FIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 237 ~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
++++.....+.....++.+++++++ ||... .|+++.+.|.+|+.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 241 ILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred ccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 9965555555544434567777775 99976 89999999999998764
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-22 Score=196.86 Aligned_cols=243 Identities=23% Similarity=0.279 Sum_probs=171.2
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCC-CCCCCCC-
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD-GDYVSLG- 115 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~-~~~~~~~- 115 (486)
.+..+...||..+.+..|.+. ..+..+||++||++.+...|..++..|..+||.|+++|+||||.|. +......
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~----~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAP----EPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccceeecCCCceEEEEeecCC----CCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 456688899999999999774 2334899999999999999999999999999999999999999997 4332222
Q ss_pred cch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH--HHHHHHH----HHhhhC
Q 011425 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--LMLELVD----VYKIRL 187 (486)
Q Consensus 116 ~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~--~~~~~~~----~~~~~~ 187 (486)
+.. ..|+..+++.+.......+++|+||||||.+++.++..++. |+++|+.+|...+.. ....... ......
T Consensus 86 f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIR 165 (298)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccc
Confidence 222 67888888888776556899999999999999999999986 999999999887652 1111111 111111
Q ss_pred CchhHHH-------------HHHHHHHHHhhhh-cc------------cccccchhhhCCCCCCCEEEEEeCCCCCCC-H
Q 011425 188 PKFTVKM-------------AVQYMRRVIQKKA-KF------------DIMDLNCLKLAPKTFIPALFGHASEDKFIR-A 240 (486)
Q Consensus 188 p~~~~~~-------------~~~~~~~~~~~~~-~~------------~~~~~~~~~~l~~i~~PvLii~G~~D~~vp-~ 240 (486)
|.+.... ............. .+ .............+++|+|+++|++|.+++ .
T Consensus 166 p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~ 245 (298)
T COG2267 166 PKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNV 245 (298)
T ss_pred cccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCc
Confidence 1111111 0000000000000 00 000001223356688999999999999999 7
Q ss_pred HHHHHHHHHcCC-CcEEEEeCC-CCCCC---Ch--HHHHHHHHHHHHHhcC
Q 011425 241 RHSDLIFNAYAG-DKNIIKFDG-DHNSS---RP--QFYYDSVSIFFYNVLH 284 (486)
Q Consensus 241 ~~~~~l~~~l~~-~~~l~~~~g-gH~~~---~p--~~~~~~I~~FL~~~l~ 284 (486)
+...++++.++. ++++++++| .|... .. +++.+.+.+|+.+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 246 EGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 888888888874 468999998 78755 34 7888999999988754
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=193.82 Aligned_cols=228 Identities=15% Similarity=0.181 Sum_probs=145.1
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC----CCcchHHH
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS----LGWHEKDD 121 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~----~~~~~~~D 121 (486)
+|..+.+... + .+.|+|||+||++++...|..++..|.+. |+|+++|+||||.|+..... ...+..++
T Consensus 16 ~~~~i~y~~~------G-~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~ 87 (294)
T PLN02824 16 KGYNIRYQRA------G-TSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFET 87 (294)
T ss_pred cCeEEEEEEc------C-CCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHH
Confidence 6777776543 2 13489999999999999999999999875 79999999999999853211 01122344
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH---------HH-HHHHHHHHHhh-----
Q 011425 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---------FD-LMLELVDVYKI----- 185 (486)
Q Consensus 122 l~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~---------~~-~~~~~~~~~~~----- 185 (486)
+...+..+.+....++++|+||||||.+++.+|.++|+ |+++|++++.... .. ....+......
T Consensus 88 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
T PLN02824 88 WGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGK 167 (294)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHH
Confidence 33333333333356899999999999999999999998 9999999875311 00 00001000000
Q ss_pred ----h-C-CchhHHHH-----------HHHHHHHHh---------hhhcc-ccc-ccchhhhCCCCCCCEEEEEeCCCCC
Q 011425 186 ----R-L-PKFTVKMA-----------VQYMRRVIQ---------KKAKF-DIM-DLNCLKLAPKTFIPALFGHASEDKF 237 (486)
Q Consensus 186 ----~-~-p~~~~~~~-----------~~~~~~~~~---------~~~~~-~~~-~~~~~~~l~~i~~PvLii~G~~D~~ 237 (486)
. . +......+ ......... ....+ ... .......+.++++|+|+|+|++|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 247 (294)
T PLN02824 168 AFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPW 247 (294)
T ss_pred HHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCC
Confidence 0 0 00000000 000000000 00000 000 0112345678999999999999999
Q ss_pred CCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 238 IRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 238 vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
++.+.++.+.+.. ...+++++++ ||+.. .|+++.+.|.+|++++
T Consensus 248 ~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 248 EPVELGRAYANFD-AVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred CChHHHHHHHhcC-CccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 9999888876655 4456788876 99876 7999999999999763
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-21 Score=187.73 Aligned_cols=222 Identities=18% Similarity=0.212 Sum_probs=145.5
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC---C-c----chHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL---G-W----HEKD 120 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~---~-~----~~~~ 120 (486)
.+...+|.|.+. .+++.|+||++||++++...|..++..|+++||.|+++|+||+|.+....... . | ..++
T Consensus 11 ~~~~~~~~p~~~-~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (249)
T PRK10566 11 GIEVLHAFPAGQ-RDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQ 89 (249)
T ss_pred CcceEEEcCCCC-CCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHH
Confidence 444556777531 23467999999999999888888999999999999999999999763211111 0 1 2257
Q ss_pred HHHHHHHHHHhcC--CCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 011425 121 DLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQY 198 (486)
Q Consensus 121 Dl~~~i~~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 198 (486)
|+.++++++.+.. +.++|+++||||||.+++.++..+|++.+.+.+.+...... ..... +....... ......
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~--~~~~~~ 164 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTS-LARTL--FPPLIPET--AAQQAE 164 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHH-HHHHh--cccccccc--cccHHH
Confidence 7888889988764 33789999999999999999999998766554333211111 11000 00000000 000000
Q ss_pred HHHHHhhhhcccccccchhhhCCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHcCC-----CcEEEEeCC-CCCCCChHHH
Q 011425 199 MRRVIQKKAKFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAG-----DKNIIKFDG-DHNSSRPQFY 271 (486)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~~-----~~~l~~~~g-gH~~~~p~~~ 271 (486)
......... ..+....+.++ ++|+|++||++|.++|++.+..+++.+.. ..+++.+++ ||... ...
T Consensus 165 ~~~~~~~~~-----~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--~~~ 237 (249)
T PRK10566 165 FNNIVAPLA-----EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--PEA 237 (249)
T ss_pred HHHHHHHHh-----hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--HHH
Confidence 111111111 11233345555 68999999999999999999999998753 246777888 99864 456
Q ss_pred HHHHHHHHHHhc
Q 011425 272 YDSVSIFFYNVL 283 (486)
Q Consensus 272 ~~~I~~FL~~~l 283 (486)
.+.+.+||++++
T Consensus 238 ~~~~~~fl~~~~ 249 (249)
T PRK10566 238 LDAGVAFFRQHL 249 (249)
T ss_pred HHHHHHHHHhhC
Confidence 799999999764
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=186.68 Aligned_cols=211 Identities=16% Similarity=0.189 Sum_probs=137.4
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC-CCcch-HHHHHHHHHHHHhcCCCCcEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHE-KDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-~~~~~-~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
...|+|||+||++++...|..++..|.+ +|+|+++|+||||.|...... ..... ++++.++++. .+..+++++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~----~~~~~~~l~ 85 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA----LNIERFHFV 85 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH----hCCCcEEEE
Confidence 4578999999999999999888877765 799999999999999754321 12111 3344444433 356889999
Q ss_pred EEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHH----HHHHHHhhh-CCchh---------HHHHHHH---H-HHH
Q 011425 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML----ELVDVYKIR-LPKFT---------VKMAVQY---M-RRV 202 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~----~~~~~~~~~-~p~~~---------~~~~~~~---~-~~~ 202 (486)
||||||.+++.+|..+|+ |+++|+++++........ ......... ...+. ..+.... . ...
T Consensus 86 G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (257)
T TIGR03611 86 GHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADE 165 (257)
T ss_pred EechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhh
Confidence 999999999999999987 999999887654311110 000000000 00000 0000000 0 000
Q ss_pred Hhhhhc-----------ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--Ch
Q 011425 203 IQKKAK-----------FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RP 268 (486)
Q Consensus 203 ~~~~~~-----------~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p 268 (486)
...... ......+....+.++++|+|+++|++|.++|++.+..+++.++. .+++++++ ||... +|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~ 244 (257)
T TIGR03611 166 AHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN-AQLKLLPYGGHASNVTDP 244 (257)
T ss_pred hhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCC-ceEEEECCCCCCccccCH
Confidence 000000 00011123355678899999999999999999999999988765 46777775 99866 78
Q ss_pred HHHHHHHHHHHH
Q 011425 269 QFYYDSVSIFFY 280 (486)
Q Consensus 269 ~~~~~~I~~FL~ 280 (486)
+++.+.|.+||+
T Consensus 245 ~~~~~~i~~fl~ 256 (257)
T TIGR03611 245 ETFNRALLDFLK 256 (257)
T ss_pred HHHHHHHHHHhc
Confidence 999999999986
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=193.29 Aligned_cols=240 Identities=15% Similarity=0.167 Sum_probs=149.4
Q ss_pred EEEEEEEc---CCCcEEEEEEEecCCCCCCCC-------CcEEEEeCCCCCChhhHH--HHHHHh-------ccCCeEEE
Q 011425 37 RQDLEIRN---ARGHVLQCSHYMPSPFPEDTP-------LPCVVYCHGNSGCRADAN--EAAVIL-------LPSNITLF 97 (486)
Q Consensus 37 ~~~i~~~~---~dG~~L~~~~~~P~~~~~~~~-------~p~VV~lHG~gg~~~~~~--~~~~~L-------~~~Gy~Vv 97 (486)
.+++.+.. .+|..++|..+ +.+. .|+|||+||++++...|. .+...| ...+|+|+
T Consensus 36 ~~~~~~~~~~~~~g~~i~y~~~------G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Vi 109 (360)
T PRK06489 36 ARDFTFHSGETLPELRLHYTTL------GTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFII 109 (360)
T ss_pred ccceeccCCCCcCCceEEEEec------CCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEE
Confidence 34444544 56777777665 2222 689999999999887775 444443 24579999
Q ss_pred EEcCCCCCCCCCCCCCC----CcchHHHHH-HHHHHHHhcCCCCcEE-EEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc
Q 011425 98 TLDFSGSGLSDGDYVSL----GWHEKDDLK-VVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (486)
Q Consensus 98 ~~D~rG~G~S~~~~~~~----~~~~~~Dl~-~~i~~l~~~~~~~~i~-LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~ 170 (486)
++|+||||.|+...... ..+..+++. .++..+.+..+.++++ |+||||||++|+.+|.++|+ |+++|++++..
T Consensus 110 a~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 110 LPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred EeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 99999999997432210 012244544 3445555555777875 89999999999999999998 99999987653
Q ss_pred CH---HHH-HHHH-HHHHhh-------hCCch--hHHH-------------------------HHHHHHHHHhhhhc---
Q 011425 171 DL---FDL-MLEL-VDVYKI-------RLPKF--TVKM-------------------------AVQYMRRVIQKKAK--- 208 (486)
Q Consensus 171 ~~---~~~-~~~~-~~~~~~-------~~p~~--~~~~-------------------------~~~~~~~~~~~~~~--- 208 (486)
.. ... .... ...... ..... .... ...++...+.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T PRK06489 190 TEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADA 269 (360)
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCH
Confidence 11 110 1000 000000 00000 0000 00001000000000
Q ss_pred ------cc-ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHH--HHHHHHcCCCcEEEEeCC-----CCCCC-ChHHHHH
Q 011425 209 ------FD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHS--DLIFNAYAGDKNIIKFDG-----DHNSS-RPQFYYD 273 (486)
Q Consensus 209 ------~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~--~~l~~~l~~~~~l~~~~g-----gH~~~-~p~~~~~ 273 (486)
+. ....+....+.+|++|+|+|+|++|.++|++.+ +.+.+.+++ .+++++++ ||... +|+++.+
T Consensus 270 ~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~e~P~~~~~ 348 (360)
T PRK06489 270 NDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTTGSAKFWKA 348 (360)
T ss_pred HHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccccCHHHHHH
Confidence 00 011234456778999999999999999999875 778888765 56777876 89876 7999999
Q ss_pred HHHHHHHHhc
Q 011425 274 SVSIFFYNVL 283 (486)
Q Consensus 274 ~I~~FL~~~l 283 (486)
.|.+||.++.
T Consensus 349 ~i~~FL~~~~ 358 (360)
T PRK06489 349 YLAEFLAQVP 358 (360)
T ss_pred HHHHHHHhcc
Confidence 9999998754
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.1e-21 Score=185.20 Aligned_cols=226 Identities=16% Similarity=0.132 Sum_probs=146.1
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-CCCcchHHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHEKDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-~~~~~~~~Dl 122 (486)
..+|..+.+... +....|+|||+||++++...|..+...|.+ +|+|+++|+||||.|+.... ... .+++
T Consensus 12 ~~~~~~~~~~~~------g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~---~~~~ 81 (278)
T TIGR03056 12 TVGPFHWHVQDM------GPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFT---LPSM 81 (278)
T ss_pred eECCEEEEEEec------CCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCC---HHHH
Confidence 347777776554 223458999999999999999999888876 69999999999999975443 222 3444
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH--------HHHHHHH----------HH
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--------LMLELVD----------VY 183 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~--------~~~~~~~----------~~ 183 (486)
.+.+..+.+..+.++++|+||||||.+++.+|..+|+ ++++|++++...... .+..... ..
T Consensus 82 ~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (278)
T TIGR03056 82 AEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRG 161 (278)
T ss_pred HHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhh
Confidence 4444444444456789999999999999999999998 999998876532110 0000000 00
Q ss_pred hhhCCchh--H--------HHHHHHHHHHHhhhh-------cc-cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHH
Q 011425 184 KIRLPKFT--V--------KMAVQYMRRVIQKKA-------KF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (486)
Q Consensus 184 ~~~~p~~~--~--------~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 245 (486)
........ . .....+......... .. ..........+.++++|+|+|+|++|.++|+..++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~ 241 (278)
T TIGR03056 162 AADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKR 241 (278)
T ss_pred cccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHH
Confidence 00000000 0 000000000000000 00 000001224567789999999999999999999999
Q ss_pred HHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 246 IFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 246 l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
+.+.+++ .+++.+++ ||+.. .|+++++.|.+|++
T Consensus 242 ~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 242 AATRVPT-ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHhccC-CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 8887754 56788887 99866 79999999999974
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-20 Score=187.13 Aligned_cols=263 Identities=14% Similarity=0.113 Sum_probs=161.6
Q ss_pred CCCCCccccccccc---------ccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh--HHH
Q 011425 16 EYNPDQYLWERDFM---------LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANE 84 (486)
Q Consensus 16 ~y~~~~~~~~~~~~---------~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--~~~ 84 (486)
.|.|+.|+.+..++ ...+++.++. +...||..+... |.+.. ......|+||++||++++... +..
T Consensus 3 ~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~--~~~~dg~~~~l~-w~~~~-~~~~~~p~vll~HG~~g~~~~~~~~~ 78 (324)
T PRK10985 3 EFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQR--LELPDGDFVDLA-WSEDP-AQARHKPRLVLFHGLEGSFNSPYAHG 78 (324)
T ss_pred CCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeE--EECCCCCEEEEe-cCCCC-ccCCCCCEEEEeCCCCCCCcCHHHHH
Confidence 46666666555553 1223343333 567788776654 33221 123457999999999887443 456
Q ss_pred HHHHhccCCeEEEEEcCCCCCCCCCCCCC-CCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC-C--c
Q 011425 85 AAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-S--I 160 (486)
Q Consensus 85 ~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p-~--v 160 (486)
++..|.++||+|+++|+||||.++..... ......+|+..+++++++..+..+++++||||||.+++.+++.++ + +
T Consensus 79 ~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~ 158 (324)
T PRK10985 79 LLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPL 158 (324)
T ss_pred HHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCc
Confidence 88889999999999999999987643211 111237899999999998777789999999999998888887764 2 8
Q ss_pred cEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHH----------------------------HHHHhhhhcccc-
Q 011425 161 AGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYM----------------------------RRVIQKKAKFDI- 211 (486)
Q Consensus 161 ~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----------------------------~~~~~~~~~~~~- 211 (486)
.++|+++++..+......+...+...+..+....+.... .........+..
T Consensus 159 ~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~ 238 (324)
T PRK10985 159 DAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADA 238 (324)
T ss_pred cEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCH
Confidence 899998888765432211111000000000000000000 000000000000
Q ss_pred ----cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC------Ch-HHHHHHHHHHH
Q 011425 212 ----MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS------RP-QFYYDSVSIFF 279 (486)
Q Consensus 212 ----~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~------~p-~~~~~~I~~FL 279 (486)
...+....+.++++|+|+|+|++|++++++....+.+.. ++..++++++ ||+.+ .+ ..+-+.+.+||
T Consensus 239 ~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 239 IDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLP-PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred HHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhC-CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHH
Confidence 012334567889999999999999999988777765544 4566677765 99854 12 24446677888
Q ss_pred HHhc
Q 011425 280 YNVL 283 (486)
Q Consensus 280 ~~~l 283 (486)
...+
T Consensus 318 ~~~~ 321 (324)
T PRK10985 318 TTYL 321 (324)
T ss_pred HHhh
Confidence 7654
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=191.53 Aligned_cols=222 Identities=17% Similarity=0.207 Sum_probs=144.4
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~ 123 (486)
.+|..+.|... +.+|+|||+||++++...|..++..|.+ +|.|+++|+||||.|+.......... .+++.
T Consensus 73 ~~~~~i~Y~~~--------g~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~ 143 (354)
T PLN02578 73 WRGHKIHYVVQ--------GEGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVA 143 (354)
T ss_pred ECCEEEEEEEc--------CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHH
Confidence 35667765432 2447799999999999999988888876 69999999999999987644333211 23444
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH--------------HHHH--------HH
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--------------LMLE--------LV 180 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~--------------~~~~--------~~ 180 (486)
++++.+ ..++++++||||||++++.+|.++|+ |+++|++++...... .... ..
T Consensus 144 ~~i~~~----~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (354)
T PLN02578 144 DFVKEV----VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWF 219 (354)
T ss_pred HHHHHh----ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHH
Confidence 444433 35789999999999999999999998 999999876432100 0000 00
Q ss_pred HHHh-------hhCCchhHHHHH----------HHHHHHH-------------hhh-hcc--cccccchhhhCCCCCCCE
Q 011425 181 DVYK-------IRLPKFTVKMAV----------QYMRRVI-------------QKK-AKF--DIMDLNCLKLAPKTFIPA 227 (486)
Q Consensus 181 ~~~~-------~~~p~~~~~~~~----------~~~~~~~-------------~~~-~~~--~~~~~~~~~~l~~i~~Pv 227 (486)
.... ...+........ .++...+ ... ..+ .....+....+.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 299 (354)
T PLN02578 220 QRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPL 299 (354)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCE
Confidence 0000 000000000000 0000000 000 000 001123345577899999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHH
Q 011425 228 LFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 228 Lii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~ 280 (486)
++|+|++|.+++.+.+..+.+.+++ .+++++++||+.. .|+++.+.|.+|+.
T Consensus 300 LiI~G~~D~~v~~~~~~~l~~~~p~-a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 300 LLLWGDLDPWVGPAKAEKIKAFYPD-TTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999999999988865 4677777899976 79999999999985
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-21 Score=209.60 Aligned_cols=239 Identities=18% Similarity=0.221 Sum_probs=177.0
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh--hHHHHHHHhccCCeEEEEEcCCCCCCCC----
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSD---- 108 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~--~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~---- 108 (486)
.+.+.+++...||.+|.++++.|.+....++.|+||++||+..... .+....+.|+.+||.|+.+++||.+.-.
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH
Confidence 4568899999999999999999987665566799999999974433 3667788999999999999999875532
Q ss_pred -CCCCCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhh
Q 011425 109 -GDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKI 185 (486)
Q Consensus 109 -~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~ 185 (486)
......+..+.+|+.++++++.+.... ++++|+|+|+||++++.++...+.+++.|...+..+...........+..
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~ 522 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRF 522 (620)
T ss_pred HhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcC
Confidence 222233345589999999988777555 59999999999999999999999988888777766533222111110000
Q ss_pred hCCchhHHHHHHHHHHHHhhh--hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeC
Q 011425 186 RLPKFTVKMAVQYMRRVIQKK--AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFD 260 (486)
Q Consensus 186 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~ 260 (486)
. ........ ........++...+.++++|+|||||+.|..||.+++..+++++. ..+++++|+
T Consensus 523 ~------------~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p 590 (620)
T COG1506 523 D------------PEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP 590 (620)
T ss_pred C------------HHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC
Confidence 0 00000000 001122336778889999999999999999999999999999875 467899999
Q ss_pred C-CCCCCC---hHHHHHHHHHHHHHhcCC
Q 011425 261 G-DHNSSR---PQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 261 g-gH~~~~---p~~~~~~I~~FL~~~l~~ 285 (486)
+ +|.... ...+.+.+.+||.++++.
T Consensus 591 ~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 591 DEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 8 998774 456788899999998753
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-21 Score=185.46 Aligned_cols=213 Identities=17% Similarity=0.231 Sum_probs=138.7
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEE
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGL 140 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~L 140 (486)
....+|+|||+||++++...|..++..|.+ +|.|+++|+||||.|..... ..+.. ++|+.++++++ +.++++|
T Consensus 12 ~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l----~~~~~~l 85 (255)
T PRK10673 12 NPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL----QIEKATF 85 (255)
T ss_pred CCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc----CCCceEE
Confidence 335679999999999999999888888876 69999999999999985432 23222 45565555554 5678999
Q ss_pred EEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH--HHHHHHHHHH----hhhCCchh--HHHH---------HHHHHHH
Q 011425 141 WGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--DLMLELVDVY----KIRLPKFT--VKMA---------VQYMRRV 202 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~--~~~~~~~~~~----~~~~p~~~--~~~~---------~~~~~~~ 202 (486)
+||||||.+++.+|..+|+ |+++|++++..... .......... ........ .... ..+....
T Consensus 86 vGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKS 165 (255)
T ss_pred EEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhc
Confidence 9999999999999999998 99999975432111 0000000000 00000000 0000 0000000
Q ss_pred Hhhhh-ccc-------ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHH
Q 011425 203 IQKKA-KFD-------IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFY 271 (486)
Q Consensus 203 ~~~~~-~~~-------~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~ 271 (486)
+.... .+. .........+..+++|+|+|+|+.|..++.+..+.+.+.+++ .+++++++ ||+.. .|+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~ 244 (255)
T PRK10673 166 FVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIAGAGHWVHAEKPDAV 244 (255)
T ss_pred CCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeCCCCCeeeccCHHHH
Confidence 00000 000 000011123567889999999999999999999999888765 56777776 99866 78999
Q ss_pred HHHHHHHHHH
Q 011425 272 YDSVSIFFYN 281 (486)
Q Consensus 272 ~~~I~~FL~~ 281 (486)
.+.|.+||.+
T Consensus 245 ~~~l~~fl~~ 254 (255)
T PRK10673 245 LRAIRRYLND 254 (255)
T ss_pred HHHHHHHHhc
Confidence 9999999975
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=183.47 Aligned_cols=211 Identities=14% Similarity=0.185 Sum_probs=136.5
Q ss_pred cEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-CCCcch-HHHHHHHHHHHHhcCCC-CcEEEEEE
Q 011425 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHE-KDDLKVVVSYLRGNKQT-SRIGLWGR 143 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-~~~~~~-~~Dl~~~i~~l~~~~~~-~~i~LvGh 143 (486)
-+|||+||++.+...|..++..|...||+|+++|+||||.|+.... ...... ++|+.++++.+ +. .+++|+||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~~lvGh 79 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL----PPDHKVILVGH 79 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc----CCCCCEEEEec
Confidence 3599999999999999999999988899999999999999975432 122111 33344444433 44 59999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCcc---CH--HHHHHHHHH----HHhh------hCCc----hhHHHHHHHH-H--
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFS---DL--FDLMLELVD----VYKI------RLPK----FTVKMAVQYM-R-- 200 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~---~~--~~~~~~~~~----~~~~------~~p~----~~~~~~~~~~-~-- 200 (486)
||||.+++.+|..+|+ |+++|++++.. .. ......... .+.. ..+. ........+. .
T Consensus 80 SmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T PLN02965 80 SIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQS 159 (255)
T ss_pred CcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCC
Confidence 9999999999999998 99999988752 10 111111000 0000 0000 0000000000 0
Q ss_pred ---------HHHhhhhccccccc-chhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--C
Q 011425 201 ---------RVIQKKAKFDIMDL-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--R 267 (486)
Q Consensus 201 ---------~~~~~~~~~~~~~~-~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~ 267 (486)
..+........... +....+..+++|+++|+|++|.++|+..++.+.+.+++. +++++++ ||..+ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~ 238 (255)
T PLN02965 160 PLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSV 238 (255)
T ss_pred CHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcC
Confidence 00000000000000 111234468999999999999999999999999988764 5677765 99977 7
Q ss_pred hHHHHHHHHHHHHHh
Q 011425 268 PQFYYDSVSIFFYNV 282 (486)
Q Consensus 268 p~~~~~~I~~FL~~~ 282 (486)
|+++.+.|.+|+...
T Consensus 239 p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 239 PTTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-20 Score=189.58 Aligned_cols=231 Identities=16% Similarity=0.227 Sum_probs=139.2
Q ss_pred CCc-EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 46 RGH-VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 46 dG~-~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
+|. +++|...-+.. .....|+|||+||++++...|..++..|.+ +|.|+++|+||||.|+.... ..+ ..+++.+
T Consensus 69 ~g~~~i~Y~~~G~g~--~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~-~~~~~a~ 143 (360)
T PLN02679 69 KGEYSINYLVKGSPE--VTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSY-TMETWAE 143 (360)
T ss_pred CCceeEEEEEecCcc--cCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccc-cHHHHHH
Confidence 354 77765542100 001348999999999999999999988876 79999999999999975422 111 1233332
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc-CCC-ccEEEEcCCccCHH------HHHHHH----HHHH--hhhCCch
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE-DPS-IAGMVLDSAFSDLF------DLMLEL----VDVY--KIRLPKF 190 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~-~p~-v~~lVl~sp~~~~~------~~~~~~----~~~~--~~~~p~~ 190 (486)
.+..+.+..+.++++|+||||||.+++.++.. +|+ |+++|++++..... ...... ...+ ....+..
T Consensus 144 ~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (360)
T PLN02679 144 LILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGI 223 (360)
T ss_pred HHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhh
Confidence 22222223356899999999999999988874 676 99999998753210 000000 0000 0000000
Q ss_pred h---------HHHHHHHHHH--------------HHhhh----------hc-cc-ccccchhhhCCCCCCCEEEEEeCCC
Q 011425 191 T---------VKMAVQYMRR--------------VIQKK----------AK-FD-IMDLNCLKLAPKTFIPALFGHASED 235 (486)
Q Consensus 191 ~---------~~~~~~~~~~--------------~~~~~----------~~-~~-~~~~~~~~~l~~i~~PvLii~G~~D 235 (486)
. ......++.. .+... .. .. ....+....+.++++|+|+|+|++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D 303 (360)
T PLN02679 224 ASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQD 303 (360)
T ss_pred HHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCC
Confidence 0 0000000000 00000 00 00 0011233456789999999999999
Q ss_pred CCCCHHHH-----HHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 236 KFIRARHS-----DLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 236 ~~vp~~~~-----~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
.++|+... ..+.+.++ +.+++++++ ||+.. .|+++.+.|.+||.+.
T Consensus 304 ~~~p~~~~~~~~~~~l~~~ip-~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 304 PFTPLDGPVGKYFSSLPSQLP-NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred CCcCchhhHHHHHHhhhccCC-ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 99998632 23444444 467888887 99976 7999999999999863
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-20 Score=195.03 Aligned_cols=235 Identities=13% Similarity=0.110 Sum_probs=149.8
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH-HHHHhc---cCCeEEEEEcCCCCCCCCCCCCCCCc
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-AAVILL---PSNITLFTLDFSGSGLSDGDYVSLGW 116 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~-~~~~L~---~~Gy~Vv~~D~rG~G~S~~~~~~~~~ 116 (486)
.+.+..|..|++....|. ++..+|+|||+||++++...|.. +...|. ..+|+|+++|+||||.|+.... ..
T Consensus 179 ~~~~~~~~~l~~~~~gp~---~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~- 253 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPK---DNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SL- 253 (481)
T ss_pred eeEeeCCeEEEEEEecCC---CCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-Cc-
Confidence 445556678888888775 22446899999999999988875 334444 4689999999999999975422 11
Q ss_pred chHHHHHHHH-HHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH----HHHHHHHHHh--hhCC
Q 011425 117 HEKDDLKVVV-SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----LMLELVDVYK--IRLP 188 (486)
Q Consensus 117 ~~~~Dl~~~i-~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~----~~~~~~~~~~--~~~p 188 (486)
+..+++.+.+ ..+.+..+.++++++||||||.+++.+|..+|+ |+++|+++++..... .......... ...+
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWP 333 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCC
Confidence 2234444444 244455577899999999999999999999998 999999987542111 0000000000 0000
Q ss_pred c-----hh---HH--------------HHHHHHHHHHhhh-----h-----------cccc-----------cccchhhh
Q 011425 189 K-----FT---VK--------------MAVQYMRRVIQKK-----A-----------KFDI-----------MDLNCLKL 219 (486)
Q Consensus 189 ~-----~~---~~--------------~~~~~~~~~~~~~-----~-----------~~~~-----------~~~~~~~~ 219 (486)
. .. .. .....+...+... . .+.. .+......
T Consensus 334 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l 413 (481)
T PLN03087 334 PIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHV 413 (481)
T ss_pred ccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHH
Confidence 0 00 00 0000000000000 0 0000 00001112
Q ss_pred CCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC---ChHHHHHHHHHHHHH
Q 011425 220 APKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS---RPQFYYDSVSIFFYN 281 (486)
Q Consensus 220 l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~~ 281 (486)
..++++|+|+|+|++|.++|++.++.+.+.++. .+++++++ ||+.+ .|+.+++.|.+|+..
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 236899999999999999999999999999865 67888887 99854 689999999999864
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=177.79 Aligned_cols=211 Identities=17% Similarity=0.182 Sum_probs=136.7
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
..|+||++||++.+...|..++..|. .||.|+++|+||||.|........ .+++.+.+..+.+..+.++++++|||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~---~~~~~~~~~~~i~~~~~~~v~liG~S 87 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYS---IEDLADDVLALLDHLGIERAVFCGLS 87 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 57899999999999999988888876 489999999999999965433222 33433333333333356789999999
Q ss_pred chHHHHHHHHhcCCC-ccEEEEcCCccCHHH--HHHHHH------------HH-Hhhh-CCch---hHHHHHHHHHHHHh
Q 011425 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--LMLELV------------DV-YKIR-LPKF---TVKMAVQYMRRVIQ 204 (486)
Q Consensus 145 mGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~--~~~~~~------------~~-~~~~-~p~~---~~~~~~~~~~~~~~ 204 (486)
|||++++.+|..+|+ |+++|++++...... ...... .. .... ...+ .......+......
T Consensus 88 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (251)
T TIGR02427 88 LGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVR 167 (251)
T ss_pred chHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHh
Confidence 999999999999987 999998876532111 000000 00 0000 0000 00000000000000
Q ss_pred hh------hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHH
Q 011425 205 KK------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSV 275 (486)
Q Consensus 205 ~~------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I 275 (486)
.. ........+....+.++++|+++++|++|.++|.+....+.+.+++ .+++++++ ||..+ .|+.+.+.|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 168 QPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred cCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEECCCCCcccccChHHHHHHH
Confidence 00 0000112233455678899999999999999999998888888754 56777875 99866 788999999
Q ss_pred HHHHH
Q 011425 276 SIFFY 280 (486)
Q Consensus 276 ~~FL~ 280 (486)
.+||.
T Consensus 247 ~~fl~ 251 (251)
T TIGR02427 247 RDFLR 251 (251)
T ss_pred HHHhC
Confidence 98873
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-20 Score=187.59 Aligned_cols=234 Identities=18% Similarity=0.212 Sum_probs=152.9
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-H-------------------------HHHHHHhccCCeE
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-A-------------------------NEAAVILLPSNIT 95 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~-------------------------~~~~~~L~~~Gy~ 95 (486)
|.+.||..|.++.|.|. .++.+||++||++++... + ..+++.|.++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 56789999999999874 467899999999988752 1 3578899999999
Q ss_pred EEEEcCCCCCCCCCCCCC----CCcch-HHHHHHHHHHHHh-------------------cCC-CCcEEEEEEcchHHHH
Q 011425 96 LFTLDFSGSGLSDGDYVS----LGWHE-KDDLKVVVSYLRG-------------------NKQ-TSRIGLWGRSMGAVTS 150 (486)
Q Consensus 96 Vv~~D~rG~G~S~~~~~~----~~~~~-~~Dl~~~i~~l~~-------------------~~~-~~~i~LvGhSmGG~lA 150 (486)
|+++|+||||.|.+.... .++.. ++|+..+++.+.+ ... ..+++|+||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 999999999999864221 12322 6778888877754 222 3589999999999999
Q ss_pred HHHHhcCC---------CccEEEEcCCccCH-----------HHHHHHHHHHHhhhCCchhHHH---HH--HHHHHHH-h
Q 011425 151 LLYGAEDP---------SIAGMVLDSAFSDL-----------FDLMLELVDVYKIRLPKFTVKM---AV--QYMRRVI-Q 204 (486)
Q Consensus 151 l~~A~~~p---------~v~~lVl~sp~~~~-----------~~~~~~~~~~~~~~~p~~~~~~---~~--~~~~~~~-~ 204 (486)
+.++...+ .++|+|+.+|...+ ......+........|.+.... .. ....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKF 236 (332)
T ss_pred HHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhc
Confidence 99886542 38899988876421 1111111111111122111100 00 0000000 0
Q ss_pred hhhccc----------cccc--chhhhCCCC--CCCEEEEEeCCCCCCCHHHHHHHHHHcC-CCcEEEEeCC-CCCCC--
Q 011425 205 KKAKFD----------IMDL--NCLKLAPKT--FIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHNSS-- 266 (486)
Q Consensus 205 ~~~~~~----------~~~~--~~~~~l~~i--~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~l~~~~g-gH~~~-- 266 (486)
....+. .... .....+..+ ++|+|+++|++|.+++++.+..+++.+. ..++++++++ +|...
T Consensus 237 Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E 316 (332)
T TIGR01607 237 DKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIE 316 (332)
T ss_pred CccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccC
Confidence 000000 0000 011233444 6899999999999999999999988765 4678889998 89876
Q ss_pred -ChHHHHHHHHHHHH
Q 011425 267 -RPQFYYDSVSIFFY 280 (486)
Q Consensus 267 -~p~~~~~~I~~FL~ 280 (486)
..+++.+.|.+||.
T Consensus 317 ~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 317 PGNEEVLKKIIEWIS 331 (332)
T ss_pred CCHHHHHHHHHHHhh
Confidence 35789999999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-19 Score=176.92 Aligned_cols=228 Identities=17% Similarity=0.208 Sum_probs=139.8
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH-HHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~-~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~ 123 (486)
.+|..+.+..+.+ .+..++|||+||++++...|.. +...+.+.||.|+++|+||+|.|............+++.
T Consensus 9 ~~~~~~~~~~~~~-----~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 9 VDGGYHLFTKTGG-----EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred CCCCeEEEEeccC-----CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 4555665544321 2346889999998766555544 444555559999999999999997543221112245555
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCc-------------
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPK------------- 189 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~------------- 189 (486)
+.+..+.+..+..+++++||||||.+++.+|..+|+ |+++|++++............... ...+.
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 162 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLR-KELPPEVRAAIKRCEASG 162 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHH-hhcChhHHHHHHHHHhcc
Confidence 555555555566789999999999999999999998 999999887654322111100000 00000
Q ss_pred -hhHHHHHHHHHHHH--------------hhh------h---------cc----cccccchhhhCCCCCCCEEEEEeCCC
Q 011425 190 -FTVKMAVQYMRRVI--------------QKK------A---------KF----DIMDLNCLKLAPKTFIPALFGHASED 235 (486)
Q Consensus 190 -~~~~~~~~~~~~~~--------------~~~------~---------~~----~~~~~~~~~~l~~i~~PvLii~G~~D 235 (486)
+............. ... . .+ .....+....+.++++|+|+++|+.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 242 (288)
T TIGR01250 163 DYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFD 242 (288)
T ss_pred CcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCC
Confidence 00000000000000 000 0 00 00111233456788999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 236 KFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 236 ~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
.+ ++.....+.+.++. .+++++++ ||+.. .|+++.+.|.+||+
T Consensus 243 ~~-~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 243 TM-TPEAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cc-CHHHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 85 66777888777754 46777776 99866 78999999999973
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=181.39 Aligned_cols=205 Identities=14% Similarity=0.117 Sum_probs=134.9
Q ss_pred cEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcch
Q 011425 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmG 146 (486)
|+|||+||++++...|..++..|.+ .|+|+++|+||||.|.... .. ..+++.. .+.+. ..++++|+|||||
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-~~---~~~~~~~---~l~~~-~~~~~~lvGhS~G 84 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG-AL---SLADMAE---AVLQQ-APDKAIWLGWSLG 84 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC-CC---CHHHHHH---HHHhc-CCCCeEEEEECHH
Confidence 5799999999999999999999976 5999999999999997532 11 2333333 33332 4589999999999
Q ss_pred HHHHHHHHhcCCC-ccEEEEcCCccCHH----------HHHHHHHHHHhh----hCCch---------h-HHHHHHHHHH
Q 011425 147 AVTSLLYGAEDPS-IAGMVLDSAFSDLF----------DLMLELVDVYKI----RLPKF---------T-VKMAVQYMRR 201 (486)
Q Consensus 147 G~lAl~~A~~~p~-v~~lVl~sp~~~~~----------~~~~~~~~~~~~----~~p~~---------~-~~~~~~~~~~ 201 (486)
|.+++.+|..+|+ |+++|++++..... .....+...... ....+ . ......+...
T Consensus 85 g~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (256)
T PRK10349 85 GLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKT 164 (256)
T ss_pred HHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHH
Confidence 9999999999998 99999987642210 001011000000 00000 0 0000000000
Q ss_pred HHhhh--------hcc-cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChH
Q 011425 202 VIQKK--------AKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQ 269 (486)
Q Consensus 202 ~~~~~--------~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~ 269 (486)
..... ... .....+....+.++++|+|+|+|+.|.++|.+.+..+.+.+++ .+++++++ ||+.+ .|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~~i~~~gH~~~~e~p~ 243 (256)
T PRK10349 165 VLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAKAAHAPFISHPA 243 (256)
T ss_pred hhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC-CeEEEeCCCCCCccccCHH
Confidence 00000 000 0012234456778999999999999999999988888888754 56788886 99977 799
Q ss_pred HHHHHHHHHHHH
Q 011425 270 FYYDSVSIFFYN 281 (486)
Q Consensus 270 ~~~~~I~~FL~~ 281 (486)
.+.+.|.+|-++
T Consensus 244 ~f~~~l~~~~~~ 255 (256)
T PRK10349 244 EFCHLLVALKQR 255 (256)
T ss_pred HHHHHHHHHhcc
Confidence 999999988653
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=177.35 Aligned_cols=204 Identities=15% Similarity=0.125 Sum_probs=133.8
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSm 145 (486)
.|+|||+||++++...|..++..|.+ +|+|+++|+||+|.|..... ...+++ ++.+.+.. .++++++||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~----~~~~~~---~~~~~~~~-~~~~~lvG~S~ 74 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP----LSLADA---AEAIAAQA-PDPAIWLGWSL 74 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCCC----cCHHHH---HHHHHHhC-CCCeEEEEEcH
Confidence 47899999999999999999988876 69999999999999875321 123333 33333332 36899999999
Q ss_pred hHHHHHHHHhcCCC-ccEEEEcCCccCHH-----------HHHHHHHHHHhhhCC----ch----------hHHHHHHHH
Q 011425 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----------DLMLELVDVYKIRLP----KF----------TVKMAVQYM 199 (486)
Q Consensus 146 GG~lAl~~A~~~p~-v~~lVl~sp~~~~~-----------~~~~~~~~~~~~~~p----~~----------~~~~~~~~~ 199 (486)
||.+++.+|.++|+ ++++|++++..... .....+......... .+ .......+.
T Consensus 75 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (245)
T TIGR01738 75 GGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALK 154 (245)
T ss_pred HHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHH
Confidence 99999999999998 99999987653210 001000000000000 00 000000000
Q ss_pred HHHHhhh--------hcc-cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--C
Q 011425 200 RRVIQKK--------AKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--R 267 (486)
Q Consensus 200 ~~~~~~~--------~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~ 267 (486)
....... ..+ .....+....+.++++|+|+++|++|.++|++..+.+.+.++ +.+++++++ ||+.. +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~ 233 (245)
T TIGR01738 155 QTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFLSH 233 (245)
T ss_pred HHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccccC
Confidence 0000000 000 011123344567899999999999999999999888888875 467888886 99866 7
Q ss_pred hHHHHHHHHHHH
Q 011425 268 PQFYYDSVSIFF 279 (486)
Q Consensus 268 p~~~~~~I~~FL 279 (486)
|+++++.|.+|+
T Consensus 234 p~~~~~~i~~fi 245 (245)
T TIGR01738 234 AEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHHhhC
Confidence 999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.6e-20 Score=180.29 Aligned_cols=222 Identities=16% Similarity=0.191 Sum_probs=140.0
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHH
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~ 125 (486)
+|.++++..+ +..|+|||+||++.....|..++..|.+ +|+|+++|+||||.|+.... .. ...+++.+.
T Consensus 22 ~~~~i~y~~~--------G~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~-~~~~~~~~~ 90 (286)
T PRK03204 22 SRGRIHYIDE--------GTGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FG-YQIDEHARV 90 (286)
T ss_pred CCcEEEEEEC--------CCCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cc-cCHHHHHHH
Confidence 5667765442 2458999999999888889888888876 69999999999999975432 11 225667777
Q ss_pred HHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH-HHHHHHHHh-----------------hh
Q 011425 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL-MLELVDVYK-----------------IR 186 (486)
Q Consensus 126 i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~-~~~~~~~~~-----------------~~ 186 (486)
+..+.+..+.++++++||||||.+++.++..+|+ |+++|++++....... ......... ..
T Consensus 91 ~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (286)
T PRK03204 91 IGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERL 170 (286)
T ss_pred HHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHh
Confidence 7776666677899999999999999999999997 9999988765311000 000000000 00
Q ss_pred CC-----chhHHHHHHHH--------HHHHhh-hhcccccc---cchhhhCC--CCCCCEEEEEeCCCCCCCHH-HHHHH
Q 011425 187 LP-----KFTVKMAVQYM--------RRVIQK-KAKFDIMD---LNCLKLAP--KTFIPALFGHASEDKFIRAR-HSDLI 246 (486)
Q Consensus 187 ~p-----~~~~~~~~~~~--------~~~~~~-~~~~~~~~---~~~~~~l~--~i~~PvLii~G~~D~~vp~~-~~~~l 246 (486)
.+ .........+. ...+.. ...+.... ......+. .+++|+|+|+|++|.++++. ..+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~ 250 (286)
T PRK03204 171 IPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRL 250 (286)
T ss_pred ccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHH
Confidence 00 00000000000 000000 00000000 00000111 12799999999999998665 46777
Q ss_pred HHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHH
Q 011425 247 FNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFF 279 (486)
Q Consensus 247 ~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL 279 (486)
.+.+++ .+++++++ ||+.. .|+++.+.|.+||
T Consensus 251 ~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 251 RATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHhcCC-CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 777765 57777876 99977 7999999999997
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=175.58 Aligned_cols=202 Identities=20% Similarity=0.255 Sum_probs=131.6
Q ss_pred EEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHH
Q 011425 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAV 148 (486)
Q Consensus 69 VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~ 148 (486)
|||+||++++...|..++..|. +||.|+++|+||+|.|........ ...++....+..+.+....++++|+|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSP-YSIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSG-GSHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCC-cchhhhhhhhhhcccccccccccccccccccc
Confidence 7999999999999999999995 799999999999999986543111 12233333333333333558999999999999
Q ss_pred HHHHHHhcCCC-ccEEEEcCCccCHHHHH---------HHHHHHHhhhCCchh---------HHHHHHHHHHHHhhhhcc
Q 011425 149 TSLLYGAEDPS-IAGMVLDSAFSDLFDLM---------LELVDVYKIRLPKFT---------VKMAVQYMRRVIQKKAKF 209 (486)
Q Consensus 149 lAl~~A~~~p~-v~~lVl~sp~~~~~~~~---------~~~~~~~~~~~p~~~---------~~~~~~~~~~~~~~~~~~ 209 (486)
+++.++..+|+ |+++|+++|........ ..+..........+. .......+.........+
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEY 158 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 99999999997 99999999988643321 111110000000000 000001110000000000
Q ss_pred -c--ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHH
Q 011425 210 -D--IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYD 273 (486)
Q Consensus 210 -~--~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~ 273 (486)
. ....+....+.++++|+++++|++|.+++.+..+.+.+.++ +.+++++++ ||+.. +|+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 159 LRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp HHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTHHHHSHHHHHH
T ss_pred cccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCccHHHCHHHHhc
Confidence 0 11223345667789999999999999999999999988875 578889986 99966 6777654
|
... |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.3e-20 Score=186.49 Aligned_cols=210 Identities=19% Similarity=0.169 Sum_probs=138.1
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
+..|+|||+||++++...|..++..|.. +|+|+++|+||||.|........ .+++.+.+..+.+..+..+++|+||
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lvG~ 204 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVGAGS---LDELAAAVLAFLDALGIERAHLVGH 204 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCCCCC---HHHHHHHHHHHHHhcCCccEEEEee
Confidence 4568999999999999999999888876 59999999999999965433322 4555555555555556688999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHH-------------HHhhh--CC-chhHHHHHHHHH------
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD-------------VYKIR--LP-KFTVKMAVQYMR------ 200 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~-------------~~~~~--~p-~~~~~~~~~~~~------ 200 (486)
||||.+++.+|..+|. +.++|++++..........+.. .+... .+ ..........+.
T Consensus 205 S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (371)
T PRK14875 205 SMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDG 284 (371)
T ss_pred chHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhcccc
Confidence 9999999999999986 9999998876321110000000 00000 00 000000000000
Q ss_pred ------HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHH
Q 011425 201 ------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFY 271 (486)
Q Consensus 201 ------~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~ 271 (486)
..............+....+.++++|+|+++|++|.++|+..+..+ .....+.++++ ||+.. .|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~~~~~~~~~gH~~~~e~p~~~ 360 (371)
T PRK14875 285 VDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----PDGVAVHVLPGAGHMPQMEAAADV 360 (371)
T ss_pred HHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----cCCCeEEEeCCCCCChhhhCHHHH
Confidence 0000000000111233445678899999999999999998876544 34567888886 99876 78999
Q ss_pred HHHHHHHHHH
Q 011425 272 YDSVSIFFYN 281 (486)
Q Consensus 272 ~~~I~~FL~~ 281 (486)
.+.|.+||.+
T Consensus 361 ~~~i~~fl~~ 370 (371)
T PRK14875 361 NRLLAEFLGK 370 (371)
T ss_pred HHHHHHHhcc
Confidence 9999999864
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-19 Score=177.87 Aligned_cols=216 Identities=14% Similarity=0.177 Sum_probs=138.8
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC-CCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
+.+|+|||+||++.+...|..++..|.+.||.|+++|+||||.|...... .++ .+++..+++++......++++|+|
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~--~~~~~~l~~~i~~l~~~~~v~lvG 93 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTF--DEYNKPLIDFLSSLPENEKVILVG 93 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCH--HHHHHHHHHHHHhcCCCCCEEEEE
Confidence 55789999999999999999999999888999999999999987543322 222 233344445555443347999999
Q ss_pred EcchHHHHHHHHhcCCC-ccEEEEcCCccC-----HHHHHHHHH---HHHhhh------C------Cc--hhHHHHHHHH
Q 011425 143 RSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLMLELV---DVYKIR------L------PK--FTVKMAVQYM 199 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~-v~~lVl~sp~~~-----~~~~~~~~~---~~~~~~------~------p~--~~~~~~~~~~ 199 (486)
|||||.+++.++..+|+ |+++|++++... ....+.... ...... . .. ........++
T Consensus 94 hS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
T PLN02211 94 HSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKIL 173 (273)
T ss_pred ECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHH
Confidence 99999999999999987 999999977532 111100000 000000 0 00 0000000000
Q ss_pred H--------H---HHhhhh-cccccccchhhhCCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC
Q 011425 200 R--------R---VIQKKA-KFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS 266 (486)
Q Consensus 200 ~--------~---~~~~~~-~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~ 266 (486)
. . ...... ...+...+.......+ ++|+++|.|++|..+|++..+.+.+.++.. +++.+++||..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~-~~~~l~~gH~p~ 252 (273)
T PLN02211 174 YQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS-QVYELESDHSPF 252 (273)
T ss_pred hcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc-EEEEECCCCCcc
Confidence 0 0 000000 0000111111123344 789999999999999999999999988654 677778999876
Q ss_pred --ChHHHHHHHHHHHHHh
Q 011425 267 --RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 267 --~p~~~~~~I~~FL~~~ 282 (486)
.|+++.+.|.++....
T Consensus 253 ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 253 FSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccCHHHHHHHHHHHHHHh
Confidence 8999999988876543
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-19 Score=184.41 Aligned_cols=220 Identities=15% Similarity=0.125 Sum_probs=139.3
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc-chHH-HHH-HHHHHHHhcCCCCcEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW-HEKD-DLK-VVVSYLRGNKQTSRIGL 140 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~-~~~~-Dl~-~~i~~l~~~~~~~~i~L 140 (486)
+..|+|||+||++++...|...+..|.+ +|+|+++|+||||.|+........ .... .+. .+.+++. ..+..+++|
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~-~l~~~~~~l 180 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK-AKNLSNFIL 180 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH-HcCCCCeEE
Confidence 4579999999999998888888888876 599999999999999754322111 1111 222 2334443 336679999
Q ss_pred EEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH--H----HHH----H----HHHH--hhhCCchh--------HHHH
Q 011425 141 WGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--L----MLE----L----VDVY--KIRLPKFT--------VKMA 195 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~--~----~~~----~----~~~~--~~~~p~~~--------~~~~ 195 (486)
+||||||++++.+|.++|+ |+++|+++|...... . ... + .... ....|... ....
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 9999999999999999997 999999987532110 0 000 0 0000 00000000 0000
Q ss_pred H-------------------------HHHHHHHhh----------hhcc-cccccchhhhCCCCCCCEEEEEeCCCCCCC
Q 011425 196 V-------------------------QYMRRVIQK----------KAKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIR 239 (486)
Q Consensus 196 ~-------------------------~~~~~~~~~----------~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp 239 (486)
. +++...... ...+ .....+....+.++++|+++|+|.+|.+++
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc
Confidence 0 000000000 0000 011223344577899999999999998775
Q ss_pred HHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhcCCC
Q 011425 240 ARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 240 ~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l~~~ 286 (486)
.....+.+......+++++++ ||+.. .|+.|++.|.+|++..+...
T Consensus 341 -~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 341 -EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred -HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 556666666655567888887 99866 79999999999999998753
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-20 Score=182.88 Aligned_cols=263 Identities=24% Similarity=0.305 Sum_probs=167.0
Q ss_pred hhhhhcccccCCCCCCCCCcccccccccccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh
Q 011425 2 IDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD 81 (486)
Q Consensus 2 ~~~~~~~~~rp~~~~y~~~~~~~~~~~~~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~ 81 (486)
+|.||+..++-.+.. .++.-+.+.++...++.+ .++.|.+.+|..|.+++++|.. ..++.|+||.+||+++....
T Consensus 24 Fd~FW~~~l~e~~~~-p~~~~l~~~~~~~~~~~v--y~v~f~s~~g~~V~g~l~~P~~--~~~~~Pavv~~hGyg~~~~~ 98 (320)
T PF05448_consen 24 FDAFWKKTLAELAAV-PLDPELEPVEFPTPGVEV--YDVSFESFDGSRVYGWLYRPKN--AKGKLPAVVQFHGYGGRSGD 98 (320)
T ss_dssp HHHHHHHHHHHHHTS-----EEEEES-SBSSEEE--EEEEEEEGGGEEEEEEEEEES---SSSSEEEEEEE--TT--GGG
T ss_pred HHHHHHHHHHHHhcC-CCCcEEEEeccCCCCEEE--EEEEEEccCCCEEEEEEEecCC--CCCCcCEEEEecCCCCCCCC
Confidence 466776655333211 111112233444445544 7899999999999999999984 34688999999999998777
Q ss_pred HHHHHHHhccCCeEEEEEcCCCCCCCCCCC-----------CCCCc----------chHHHHHHHHHHHHhcCCC--CcE
Q 011425 82 ANEAAVILLPSNITLFTLDFSGSGLSDGDY-----------VSLGW----------HEKDDLKVVVSYLRGNKQT--SRI 138 (486)
Q Consensus 82 ~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~-----------~~~~~----------~~~~Dl~~~i~~l~~~~~~--~~i 138 (486)
+...+ .++..||.|+.+|.||.|...... ...+. ..+.|+..+++++.++..+ ++|
T Consensus 99 ~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI 177 (320)
T PF05448_consen 99 PFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRI 177 (320)
T ss_dssp HHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEE
T ss_pred ccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceE
Confidence 76654 467789999999999998322100 00011 0157899999999998765 799
Q ss_pred EEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHH----------HHHhhhhc
Q 011425 139 GLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMR----------RVIQKKAK 208 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----------~~~~~~~~ 208 (486)
++.|.|+||.+++.+|+.+++|+++++..|+..-......... ...+...+..+++ .++.....
T Consensus 178 ~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~~~~~~~~------~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y 251 (320)
T PF05448_consen 178 GVTGGSQGGGLALAAAALDPRVKAAAADVPFLCDFRRALELRA------DEGPYPEIRRYFRWRDPHHEREPEVFETLSY 251 (320)
T ss_dssp EEEEETHHHHHHHHHHHHSST-SEEEEESESSSSHHHHHHHT--------STTTHHHHHHHHHHSCTHCHHHHHHHHHHT
T ss_pred EEEeecCchHHHHHHHHhCccccEEEecCCCccchhhhhhcCC------ccccHHHHHHHHhccCCCcccHHHHHHHHhh
Confidence 9999999999999999999999999999887653332221111 0011111122221 12222222
Q ss_pred ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHh
Q 011425 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 209 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~ 282 (486)
+|....+++|++|+++..|-.|.++|+.....+++.++..+++++++. ||... ++...+...+||.++
T Consensus 252 -----~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~-~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 252 -----FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG-PEFQEDKQLNFLKEH 320 (320)
T ss_dssp -----T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT-HHHHHHHHHHHHHH-
T ss_pred -----hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch-hhHHHHHHHHHHhcC
Confidence 366678889999999999999999999999999999998999999998 77644 333378888898764
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.3e-19 Score=176.70 Aligned_cols=233 Identities=16% Similarity=0.185 Sum_probs=144.7
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
.+...+|.+|.+..+ +....++|||+||+.++...+ .+...+...+|+|+++|+||||.|........ ...+
T Consensus 8 ~~~~~~~~~l~y~~~------g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~-~~~~ 79 (306)
T TIGR01249 8 YLNVSDNHQLYYEQS------GNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEE-NTTW 79 (306)
T ss_pred eEEcCCCcEEEEEEC------cCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCccc-CCHH
Confidence 355567888887664 222356899999988765543 34445555689999999999999985432221 1245
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHH------------HHHHHHhhhC
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML------------ELVDVYKIRL 187 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~------------~~~~~~~~~~ 187 (486)
++.+.+..+.+..+..+++++||||||.+++.++..+|+ |+++|+++++........ .....+....
T Consensus 80 ~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T TIGR01249 80 DLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSI 159 (306)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhC
Confidence 556666666665567889999999999999999999997 999999887643211000 0000010000
Q ss_pred CchhH--HHHHH--------------HHHHHHhh-h----h--------------------cc--------ccc--ccch
Q 011425 188 PKFTV--KMAVQ--------------YMRRVIQK-K----A--------------------KF--------DIM--DLNC 216 (486)
Q Consensus 188 p~~~~--~~~~~--------------~~~~~~~~-~----~--------------------~~--------~~~--~~~~ 216 (486)
+.... ..... ........ . . .+ ... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (306)
T TIGR01249 160 PENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFI 239 (306)
T ss_pred ChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHH
Confidence 00000 00000 00000000 0 0 00 000 0012
Q ss_pred hhhCCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 011425 217 LKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 217 ~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l 283 (486)
...+.++ ++|+|+|+|..|.++|++.+..+++.+++ .+++++++ ||....+ ...+.|.+|+...+
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~-~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAFDP-NNLAALVHALETYL 306 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCCCh-HHHHHHHHHHHHhC
Confidence 2344566 58999999999999999999999998864 56888876 9998755 45677888877653
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=182.33 Aligned_cols=235 Identities=14% Similarity=0.077 Sum_probs=147.6
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHH---HHhccCCeEEEEEcCCCCCCCCCCCC---CCCc---
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA---VILLPSNITLFTLDFSGSGLSDGDYV---SLGW--- 116 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~---~~L~~~Gy~Vv~~D~rG~G~S~~~~~---~~~~--- 116 (486)
+|.+|.|..+-+. ..+..|+||++||++++...|..++ ..|...+|+|+++|+||||.|+.... ..+.
T Consensus 24 ~~~~l~y~~~G~~---~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 24 PDARLAYKTYGTL---NAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CCceEEEEecCcc---CCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 5667776655221 1124577888888887766654443 35666689999999999999974432 1111
Q ss_pred ---chHHHHHHHHHHHHhcCCCCc-EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHH----HHHH-------
Q 011425 117 ---HEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM----LELV------- 180 (486)
Q Consensus 117 ---~~~~Dl~~~i~~l~~~~~~~~-i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~----~~~~------- 180 (486)
...+|+.+....+.+..++++ ++|+||||||++|+.+|..+|+ |+++|++++........ ....
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 124666665555666567888 5799999999999999999998 99999987654311100 0000
Q ss_pred -------------------HHHhh--hCCch---------h----HHHHHHHHHHHHh------------hhhccccc--
Q 011425 181 -------------------DVYKI--RLPKF---------T----VKMAVQYMRRVIQ------------KKAKFDIM-- 212 (486)
Q Consensus 181 -------------------~~~~~--~~p~~---------~----~~~~~~~~~~~~~------------~~~~~~~~-- 212 (486)
..+.. ..+.+ . ............. ........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 00000 00000 0 0000000000000 00000000
Q ss_pred ---ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC--CCCCC--ChHHHHHHHHHHHHHhcC
Q 011425 213 ---DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG--DHNSS--RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 213 ---~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g--gH~~~--~p~~~~~~I~~FL~~~l~ 284 (486)
..+....+.++++|+|+|+|++|.++|+..+..+.+.+++ .+++++++ ||..+ .++.+...|.+||.+.+.
T Consensus 261 ~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 261 PAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred cccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 1134456778999999999999999999999999888865 56777774 99866 789999999999998764
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-20 Score=174.12 Aligned_cols=262 Identities=23% Similarity=0.293 Sum_probs=192.3
Q ss_pred hhhhhcccccCCCCCCCCCcccccccccccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh
Q 011425 2 IDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD 81 (486)
Q Consensus 2 ~~~~~~~~~rp~~~~y~~~~~~~~~~~~~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~ 81 (486)
+|+||+.-++-.+ .+.++..+.+.++++..++. -+++|+.-+|.+|.+++.+|.. +.+..|+||-.||+++....
T Consensus 24 FdeFW~~~l~e~~-~~~~~p~l~~~d~~~~~ve~--ydvTf~g~~g~rI~gwlvlP~~--~~~~~P~vV~fhGY~g~~g~ 98 (321)
T COG3458 24 FDEFWKKTLEEAR-KVPPEPVLERSDFTLPRVEV--YDVTFTGYGGARIKGWLVLPRH--EKGKLPAVVQFHGYGGRGGE 98 (321)
T ss_pred HHHHHHHHHHHHh-cCCCCceEEeccccCCceEE--EEEEEeccCCceEEEEEEeecc--cCCccceEEEEeeccCCCCC
Confidence 5778877776655 34666667888888877766 7899999999999999999984 44789999999999999887
Q ss_pred HHHHHHHhccCCeEEEEEcCCCCCCCCC----CCCC---CC------------c---chHHHHHHHHHHHHhcCCC--Cc
Q 011425 82 ANEAAVILLPSNITLFTLDFSGSGLSDG----DYVS---LG------------W---HEKDDLKVVVSYLRGNKQT--SR 137 (486)
Q Consensus 82 ~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~----~~~~---~~------------~---~~~~Dl~~~i~~l~~~~~~--~~ 137 (486)
|..+. .|+..||.|+.+|.||.|.+.. .+.. .+ + ....|+..+++-+.....+ ++
T Consensus 99 ~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~R 177 (321)
T COG3458 99 WHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEER 177 (321)
T ss_pred ccccc-cccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhh
Confidence 87766 5566699999999999988732 1111 01 0 1157888999999887666 79
Q ss_pred EEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHH-------HHHHhhhhccc
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYM-------RRVIQKKAKFD 210 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-------~~~~~~~~~~~ 210 (486)
|++.|.|.||.+++.+++..|+|++++++-|+.+-......+.. .-+...+..++ ..++.....+
T Consensus 178 i~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~~~~-------~~~ydei~~y~k~h~~~e~~v~~TL~yf- 249 (321)
T COG3458 178 IGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIELAT-------EGPYDEIQTYFKRHDPKEAEVFETLSYF- 249 (321)
T ss_pred eEEeccccCchhhhhhhhcChhhhcccccccccccchhheeecc-------cCcHHHHHHHHHhcCchHHHHHHHHhhh-
Confidence 99999999999999999999999999999998753332211100 00011111111 1122222222
Q ss_pred ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHh
Q 011425 211 IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 211 ~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~ 282 (486)
|....+.++++|+|+..|-.|+++||...-.+++++...+++.+++- +|... |....+.+..|+...
T Consensus 250 ----D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~-p~~~~~~~~~~l~~l 317 (321)
T COG3458 250 ----DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG-PGFQSRQQVHFLKIL 317 (321)
T ss_pred ----hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC-cchhHHHHHHHHHhh
Confidence 55667889999999999999999999999999999999999999986 88755 233334466666543
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=175.32 Aligned_cols=245 Identities=16% Similarity=0.101 Sum_probs=155.1
Q ss_pred ccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCC
Q 011425 30 LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 30 ~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
...++|..+.+.+. ++..+......+ +...++++||+||+|.....|......|++ ...|+++|++|+|.|+.
T Consensus 60 ~~~v~~~~~~v~i~--~~~~iw~~~~~~----~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSR 132 (365)
T KOG4409|consen 60 SVPVPYSKKYVRIP--NGIEIWTITVSN----ESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSR 132 (365)
T ss_pred hcCCCcceeeeecC--CCceeEEEeecc----cccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCC
Confidence 34667766666554 454444434333 346788999999999999999988889988 79999999999999986
Q ss_pred CCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH------------
Q 011425 110 DYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL------------ 175 (486)
Q Consensus 110 ~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~------------ 175 (486)
+........ ...+.+.|+..+...+..+.+|+|||+||+++..||.++|+ |+.|||++|..-....
T Consensus 133 P~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~ 212 (365)
T KOG4409|consen 133 PKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPE 212 (365)
T ss_pred CCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChH
Confidence 655443322 34455666666666688999999999999999999999998 9999999986532210
Q ss_pred -HHHHHHHHhhhCCchhH--------HHHHHHHHHHHhhhh---c----------------------------ccccccc
Q 011425 176 -MLELVDVYKIRLPKFTV--------KMAVQYMRRVIQKKA---K----------------------------FDIMDLN 215 (486)
Q Consensus 176 -~~~~~~~~~~~~p~~~~--------~~~~~~~~~~~~~~~---~----------------------------~~~~~~~ 215 (486)
...+........|...+ .....+..+.+.... . ..+....
T Consensus 213 w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~P 292 (365)
T KOG4409|consen 213 WYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRP 292 (365)
T ss_pred HHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhh
Confidence 00000000000010000 000001000000000 0 0000111
Q ss_pred hhhhCCCCC--CCEEEEEeCCCCCCCHHHHHHHHHH-cCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 216 CLKLAPKTF--IPALFGHASEDKFIRARHSDLIFNA-YAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 216 ~~~~l~~i~--~PvLii~G~~D~~vp~~~~~~l~~~-l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
..+.+..++ ||+++|+|++|.+=.. ...++... ....++++++++ ||+.. +|+.|.+.|..+++..
T Consensus 293 m~~r~~~l~~~~pv~fiyG~~dWmD~~-~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 293 MIQRLRELKKDVPVTFIYGDRDWMDKN-AGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHHHhhccCCCEEEEecCcccccch-hHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 223333344 9999999999977443 34444443 445578888887 99866 8999999999998753
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-19 Score=176.32 Aligned_cols=237 Identities=16% Similarity=0.202 Sum_probs=148.5
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCC----ChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG----CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg----~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
+.+.|. .+|..|.+.++.|.. ...+.||++||+.+ ....+..+++.|+++||.|+++|+||||.|.+....
T Consensus 3 ~~~~~~-~~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~ 77 (274)
T TIGR03100 3 RALTFS-CEGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLG 77 (274)
T ss_pred eeEEEE-cCCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC
Confidence 345565 567889999998853 23456777777653 333456678899999999999999999999865322
Q ss_pred CCcchHHHHHHHHHHHHhcC-CCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHH-----HHHHHHHHH----
Q 011425 114 LGWHEKDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFD-----LMLELVDVY---- 183 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~-~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~-----~~~~~~~~~---- 183 (486)
.. ...+|+.++++++++.. +.++|+++||||||.+++.+|...+.|+++|+++|+..... .........
T Consensus 78 ~~-~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T TIGR03100 78 FE-GIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA 156 (274)
T ss_pred HH-HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh
Confidence 11 22688999999998764 45789999999999999999877667999999999854221 111110000
Q ss_pred ---hhhCC-chhHHHHHHHHHH-HHhhhh-----cccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH-----HHHHHH
Q 011425 184 ---KIRLP-KFTVKMAVQYMRR-VIQKKA-----KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH-----SDLIFN 248 (486)
Q Consensus 184 ---~~~~p-~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-----~~~l~~ 248 (486)
....+ .+.+......+.. ...... .......+....+..+++|+|+++|..|...+.-. .....+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~ 236 (274)
T TIGR03100 157 DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRG 236 (274)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHH
Confidence 00000 0000000111111 000000 00001112334455678999999999998863211 033334
Q ss_pred HcC-CCcEEEEeCC-CCCCC---ChHHHHHHHHHHHH
Q 011425 249 AYA-GDKNIIKFDG-DHNSS---RPQFYYDSVSIFFY 280 (486)
Q Consensus 249 ~l~-~~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~ 280 (486)
.+. ..++++.+++ +|+.. .++++.+.|.+||+
T Consensus 237 ~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 237 ALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 343 5678888876 99875 45789999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-19 Score=170.41 Aligned_cols=210 Identities=17% Similarity=0.195 Sum_probs=134.3
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHH-HHHHHhcCCCCcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV-VSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~-i~~l~~~~~~~~i~LvGhS 144 (486)
+|+||++||++++...|..++..|+ .||.|+++|+||+|.|+....... ...+++... +..+.+..+.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIER-YDFEEAAQDILATLLDQLGIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccCh-hhHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 3789999999999999999999998 699999999999999975432121 223444433 5555555566899999999
Q ss_pred chHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH---------HHHHHhhh-CCc----------------hhHHHHHH
Q 011425 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE---------LVDVYKIR-LPK----------------FTVKMAVQ 197 (486)
Q Consensus 145 mGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~---------~~~~~~~~-~p~----------------~~~~~~~~ 197 (486)
|||.+++.+|..+|+ |+++|++++.......... ....+... ... ........
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 999999999999998 9999998876432211000 00000000 000 00000000
Q ss_pred HHHHH--------Hhhhhccc-ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-
Q 011425 198 YMRRV--------IQKKAKFD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS- 266 (486)
Q Consensus 198 ~~~~~--------~~~~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~- 266 (486)
+.... ........ ....+....+..+++|+++++|++|..++ .....+.+.+ ...+++.+++ ||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~ 236 (251)
T TIGR03695 159 LRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHNIHL 236 (251)
T ss_pred HHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCCcCc
Confidence 00000 00000000 00112334567789999999999998764 4455555555 4567888887 99866
Q ss_pred -ChHHHHHHHHHHH
Q 011425 267 -RPQFYYDSVSIFF 279 (486)
Q Consensus 267 -~p~~~~~~I~~FL 279 (486)
.++++.+.|.+||
T Consensus 237 e~~~~~~~~i~~~l 250 (251)
T TIGR03695 237 ENPEAFAKILLAFL 250 (251)
T ss_pred cChHHHHHHHHHHh
Confidence 7889999999987
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.2e-19 Score=180.49 Aligned_cols=227 Identities=14% Similarity=0.120 Sum_probs=144.8
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC-cchHHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG-WHEKDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~-~~~~~Dl 122 (486)
..+|.++.+... +....|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+....... .+..+++
T Consensus 111 ~~~~~~~~y~~~------G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 111 SSDLFRWFCVES------GSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred cCCceEEEEEec------CCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHH
Confidence 467777765443 223468999999999999999999988876 79999999999999986533211 1223444
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH-----HHHHHHHHHHH----hhhCCc---
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL-----FDLMLELVDVY----KIRLPK--- 189 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~-----~~~~~~~~~~~----~~~~p~--- 189 (486)
...+..+.+....++++|+|||+||.+++.+|..+|+ |+++|++++.... ......+.... ....+.
T Consensus 184 a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~ 263 (383)
T PLN03084 184 VSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRAS 263 (383)
T ss_pred HHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHH
Confidence 4444444344466899999999999999999999998 9999999987431 11111000000 000000
Q ss_pred -----------hhHHHHHHHHH-------------HHHhhhhcccccc--cchhh--hCCCCCCCEEEEEeCCCCCCCHH
Q 011425 190 -----------FTVKMAVQYMR-------------RVIQKKAKFDIMD--LNCLK--LAPKTFIPALFGHASEDKFIRAR 241 (486)
Q Consensus 190 -----------~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~~~~--~l~~i~~PvLii~G~~D~~vp~~ 241 (486)
........+.. ..+... ...... .+... ....+++|+|+|+|+.|.+++.+
T Consensus 264 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~-~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~ 342 (383)
T PLN03084 264 DKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSM-KKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYD 342 (383)
T ss_pred hhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHh-hcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHH
Confidence 00000000000 000000 000000 00001 11357899999999999999999
Q ss_pred HHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 242 HSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 242 ~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
.++.+++.. +.+++++++ ||+.. .|+++++.|.+||.
T Consensus 343 ~~~~~a~~~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 343 GVEDFCKSS--QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHhc--CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 888888864 457888887 99877 79999999999985
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-19 Score=172.10 Aligned_cols=203 Identities=16% Similarity=0.192 Sum_probs=127.1
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSm 145 (486)
.|+|||+||++++...|..++..| + +|+|+++|+||||.|..... .. .+++...+..+.+..+.++++++||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~-~~---~~~~~~~l~~~l~~~~~~~~~lvG~S~ 75 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV-DG---FADVSRLLSQTLQSYNILPYWLVGYSL 75 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc-cC---HHHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 478999999999999999999887 3 69999999999999975432 12 233333332222333678999999999
Q ss_pred hHHHHHHHHhcCC-C-ccEEEEcCCccCHHH---HHHHHH--HHHhhhCCchh-HHHHH-----------------HHHH
Q 011425 146 GAVTSLLYGAEDP-S-IAGMVLDSAFSDLFD---LMLELV--DVYKIRLPKFT-VKMAV-----------------QYMR 200 (486)
Q Consensus 146 GG~lAl~~A~~~p-~-v~~lVl~sp~~~~~~---~~~~~~--~~~~~~~p~~~-~~~~~-----------------~~~~ 200 (486)
||.+++.+|..+| + |+++|++++...... ...... ..+........ ..... .+..
T Consensus 76 Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (242)
T PRK11126 76 GGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVA 155 (242)
T ss_pred HHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHH
Confidence 9999999999985 4 999999876543211 000000 00000000000 00000 0000
Q ss_pred HHH-------hhhh-ccc-ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--Ch
Q 011425 201 RVI-------QKKA-KFD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RP 268 (486)
Q Consensus 201 ~~~-------~~~~-~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p 268 (486)
... .... ... ....+....+.++++|+++|+|++|..+. .+.+.. +.+++++++ ||+.. .|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~--~~~~~~i~~~gH~~~~e~p 228 (242)
T PRK11126 156 KRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL--ALPLHVIPNAGHNAHRENP 228 (242)
T ss_pred hcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh--cCeEEEeCCCCCchhhhCh
Confidence 000 0000 000 01113345677899999999999998652 223332 467888887 99977 79
Q ss_pred HHHHHHHHHHHHH
Q 011425 269 QFYYDSVSIFFYN 281 (486)
Q Consensus 269 ~~~~~~I~~FL~~ 281 (486)
+++.+.|.+||.+
T Consensus 229 ~~~~~~i~~fl~~ 241 (242)
T PRK11126 229 AAFAASLAQILRL 241 (242)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999964
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.6e-19 Score=171.72 Aligned_cols=233 Identities=16% Similarity=0.153 Sum_probs=150.5
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE- 118 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~- 118 (486)
+.+.+-+|..+.+..- +.+..|+|+++||+...-.+|+.....|+.+||+|+++|+||+|.|+.......+..
T Consensus 24 hk~~~~~gI~~h~~e~------g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~ 97 (322)
T KOG4178|consen 24 HKFVTYKGIRLHYVEG------GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTID 97 (322)
T ss_pred eeeEEEccEEEEEEee------cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHH
Confidence 3344445644443332 446789999999999999999999999999999999999999999997655444332
Q ss_pred --HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC-----HHHHH--------------
Q 011425 119 --KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLM-------------- 176 (486)
Q Consensus 119 --~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~-----~~~~~-------------- 176 (486)
+.|+.++++.+ +.++++++||+||+++|+.+|..+|+ |+++|+++.... ..+..
T Consensus 98 ~l~~di~~lld~L----g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ 173 (322)
T KOG4178|consen 98 ELVGDIVALLDHL----GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQ 173 (322)
T ss_pred HHHHHHHHHHHHh----ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEecc
Confidence 44555555555 68999999999999999999999998 999999775443 00000
Q ss_pred --------------HHHHHHH-hhhCC---------c----hhHHHHHHHHHHHHhhhh------cccccccch---hhh
Q 011425 177 --------------LELVDVY-KIRLP---------K----FTVKMAVQYMRRVIQKKA------KFDIMDLNC---LKL 219 (486)
Q Consensus 177 --------------~~~~~~~-~~~~p---------~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~---~~~ 219 (486)
..+...+ ....+ . +......++....+.... .+..+..+. ...
T Consensus 174 ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~ 253 (322)
T KOG4178|consen 174 EPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWA 253 (322)
T ss_pred ccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccc
Confidence 0000000 00000 0 000011111111110000 001111121 345
Q ss_pred CCCCCCCEEEEEeCCCCCCCHHHHHHHHHH-cCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 220 APKTFIPALFGHASEDKFIRARHSDLIFNA-YAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 220 l~~i~~PvLii~G~~D~~vp~~~~~~l~~~-l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
...+++|+++|+|..|.+.+.......++. ++...+.+++++ ||+.. .|+++.+.+..||++.
T Consensus 254 ~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 254 LAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 667899999999999999887744444443 444446667776 99976 7999999999999874
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.2e-19 Score=175.83 Aligned_cols=218 Identities=17% Similarity=0.244 Sum_probs=147.5
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
...|.||++||++++...|...+..|.+. |+.|+++|++|+|.++..+....++ +.+....+..+.......+++++|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~-~~~~v~~i~~~~~~~~~~~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYT-LRELVELIRRFVKEVFVEPVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCcee-hhHHHHHHHHHHHhhcCcceEEEE
Confidence 47899999999999999999998888776 5999999999999665444333333 455555555555544667799999
Q ss_pred EcchHHHHHHHHhcCCC-ccEEE---EcCCccCHHH----HHHHHHH----HHhhhCCchhHHH----------------
Q 011425 143 RSMGAVTSLLYGAEDPS-IAGMV---LDSAFSDLFD----LMLELVD----VYKIRLPKFTVKM---------------- 194 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~-v~~lV---l~sp~~~~~~----~~~~~~~----~~~~~~p~~~~~~---------------- 194 (486)
|||||.+|+.+|+.+|+ |+.+| ++++...... ....... ......|......
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVY 214 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeec
Confidence 99999999999999999 99999 6665543211 1111111 1111111100000
Q ss_pred -----HHHHHHHHHh--------hhhccccc------ccchhhhCCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHcCCCc
Q 011425 195 -----AVQYMRRVIQ--------KKAKFDIM------DLNCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYAGDK 254 (486)
Q Consensus 195 -----~~~~~~~~~~--------~~~~~~~~------~~~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~~~ 254 (486)
........+. ......+. +......+.++. +|+||++|..|+++|.+.+..+.+.+ ++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~ 293 (326)
T KOG1454|consen 215 TDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNA 293 (326)
T ss_pred cccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCc
Confidence 0000000000 00001111 123344566676 99999999999999999999999988 667
Q ss_pred EEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 255 NIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 255 ~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
+++++++ ||... .|+.++..|..|+.+..
T Consensus 294 ~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 294 ELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred eEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 8999985 99876 79999999999998753
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.4e-19 Score=179.52 Aligned_cols=233 Identities=12% Similarity=0.086 Sum_probs=144.7
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-----------HHHHH---HHhccCCeEEEEEcCCC--CCCCC
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----------ANEAA---VILLPSNITLFTLDFSG--SGLSD 108 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-----------~~~~~---~~L~~~Gy~Vv~~D~rG--~G~S~ 108 (486)
.+|.+|.|..|-+. .....|+|||+||++++... |..++ ..|...+|.|+++|+|| ||.|.
T Consensus 13 ~~~~~~~y~~~g~~---~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 13 LSDVRVAYETYGTL---NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred cCCceEEEEecccc---CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCC
Confidence 36778888887542 11345799999999997632 44443 25666789999999999 55553
Q ss_pred CC---CCC------CCcchHHHHHHHHHHHHhcCCCCc-EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH--
Q 011425 109 GD---YVS------LGWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL-- 175 (486)
Q Consensus 109 ~~---~~~------~~~~~~~Dl~~~i~~l~~~~~~~~-i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~-- 175 (486)
.. +.. .....++|+.+.+..+.+..+.++ ++|+||||||++++.+|..+|+ |+++|++++.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCI 169 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHH
Confidence 21 110 111235666666655556567788 9999999999999999999998 9999999876532110
Q ss_pred -HHH-HHHHHhhh-------C-----CchhHHH--------------------------------------HHHHHH---
Q 011425 176 -MLE-LVDVYKIR-------L-----PKFTVKM--------------------------------------AVQYMR--- 200 (486)
Q Consensus 176 -~~~-~~~~~~~~-------~-----p~~~~~~--------------------------------------~~~~~~--- 200 (486)
... ........ . |...... ...+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
T TIGR01392 170 AFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQG 249 (351)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHH
Confidence 000 00000000 0 0000000 000000
Q ss_pred -HHHh------------hhhcccccc--cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEE----EEeCC
Q 011425 201 -RVIQ------------KKAKFDIMD--LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI----IKFDG 261 (486)
Q Consensus 201 -~~~~------------~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l----~~~~g 261 (486)
..+. ....++... .+....+.+|++|+|+|+|++|.++|+..++.+.+.+++.... .++++
T Consensus 250 ~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 250 DKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESP 329 (351)
T ss_pred HHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCC
Confidence 0000 000000000 1234667789999999999999999999999999998754322 14555
Q ss_pred -CCCCC--ChHHHHHHHHHHHH
Q 011425 262 -DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 262 -gH~~~--~p~~~~~~I~~FL~ 280 (486)
||..+ .|+++.+.|.+||.
T Consensus 330 ~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCcchhhcCHHHHHHHHHHHhC
Confidence 99876 89999999999973
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=177.23 Aligned_cols=228 Identities=13% Similarity=0.126 Sum_probs=135.9
Q ss_pred EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh------------hHHHHHH---HhccCCeEEEEEcCCCCCCC
Q 011425 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA------------DANEAAV---ILLPSNITLFTLDFSGSGLS 107 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~------------~~~~~~~---~L~~~Gy~Vv~~D~rG~G~S 107 (486)
...+|..|.|..+ +.+..| +||+||+.++.. .|..++. .|...+|+|+++|+||||.|
T Consensus 41 ~~~~~~~l~y~~~------G~~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s 113 (343)
T PRK08775 41 AGLEDLRLRYELI------GPAGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGS 113 (343)
T ss_pred CCCCCceEEEEEe------ccCCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCC
Confidence 3447778887765 212335 555555554443 4666665 46445799999999999987
Q ss_pred CCCCCCCCcc-hHHHHHHHHHHHHhcCCCCc-EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH---HHHHHHH
Q 011425 108 DGDYVSLGWH-EKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD---LMLELVD 181 (486)
Q Consensus 108 ~~~~~~~~~~-~~~Dl~~~i~~l~~~~~~~~-i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~---~~~~~~~ 181 (486)
... ..... .++|+.++++. .+.++ ++|+||||||++++.+|.++|+ |+++|++++...... .......
T Consensus 114 ~~~--~~~~~~~a~dl~~ll~~----l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~ 187 (343)
T PRK08775 114 LDV--PIDTADQADAIALLLDA----LGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQR 187 (343)
T ss_pred CCC--CCCHHHHHHHHHHHHHH----cCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHH
Confidence 532 11111 13344433333 36655 5799999999999999999998 999999987543211 0110000
Q ss_pred HHhhhC-----Cch--------------hHH-------------------HHHHHHHH----HHhhhh---ccccc-ccc
Q 011425 182 VYKIRL-----PKF--------------TVK-------------------MAVQYMRR----VIQKKA---KFDIM-DLN 215 (486)
Q Consensus 182 ~~~~~~-----p~~--------------~~~-------------------~~~~~~~~----~~~~~~---~~~~~-~~~ 215 (486)
...... ... ... ....++.. ...... ..... ..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T PRK08775 188 RAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESID 267 (343)
T ss_pred HHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHh
Confidence 000000 000 000 00000000 000000 00000 000
Q ss_pred h-hhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeC--CCCCCC--ChHHHHHHHHHHHHHhc
Q 011425 216 C-LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD--GDHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 216 ~-~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~--ggH~~~--~p~~~~~~I~~FL~~~l 283 (486)
. ...+.++++|+|+|+|+.|.++|+..+..+.+.+.++.++++++ +||... .|+++.+.|.+||.+.-
T Consensus 268 ~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 268 LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 0 12356889999999999999999999999999886556788885 499866 89999999999998653
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.1e-19 Score=155.04 Aligned_cols=143 Identities=30% Similarity=0.462 Sum_probs=119.8
Q ss_pred EEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHh-cCCCCcEEEEEEcch
Q 011425 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRG-NKQTSRIGLWGRSMG 146 (486)
Q Consensus 68 ~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~-~~~~~~i~LvGhSmG 146 (486)
+||++||++++...|..++..|+++||.|+++|+||+|.+.+ ..++..+++++.. ..+..+++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG---------ADAVERVLADIRAGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH---------SHHHHHHHHHHHHHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch---------hHHHHHHHHHHHhhcCCCCcEEEEEEccC
Confidence 589999999999999999999999999999999999998832 2466777776633 235689999999999
Q ss_pred HHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCC
Q 011425 147 AVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP 226 (486)
Q Consensus 147 G~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 226 (486)
|.+++.++.+++.|+++|+++++.. ...+...++|
T Consensus 72 g~~a~~~~~~~~~v~~~v~~~~~~~---------------------------------------------~~~~~~~~~p 106 (145)
T PF12695_consen 72 GAIAANLAARNPRVKAVVLLSPYPD---------------------------------------------SEDLAKIRIP 106 (145)
T ss_dssp HHHHHHHHHHSTTESEEEEESESSG---------------------------------------------CHHHTTTTSE
T ss_pred cHHHHHHhhhccceeEEEEecCccc---------------------------------------------hhhhhccCCc
Confidence 9999999999888999999998411 1233456679
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCC
Q 011425 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHN 264 (486)
Q Consensus 227 vLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~ 264 (486)
+++++|+.|.+++++....+++.++.+.+++++++ +|+
T Consensus 107 v~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 107 VLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred EEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 99999999999999999999999988889999998 885
|
... |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.4e-18 Score=173.43 Aligned_cols=235 Identities=15% Similarity=0.113 Sum_probs=143.6
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-------------HHHHH---HHhccCCeEEEEEcCCCC-CCCC
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-------------ANEAA---VILLPSNITLFTLDFSGS-GLSD 108 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-------------~~~~~---~~L~~~Gy~Vv~~D~rG~-G~S~ 108 (486)
+|.+|.|..+-.. ..+..|+|||+||++++... |..++ ..|...+|.|+++|++|+ |.|.
T Consensus 31 ~~~~~~y~~~G~~---~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 31 PPVELAYETYGTL---NADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCceEEEEecccc---CCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 4556677666321 12236899999999999875 33443 134356899999999983 5443
Q ss_pred CCC----C---CC----CcchHHHHHHHHHHHHhcCCCCc-EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH
Q 011425 109 GDY----V---SL----GWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL 175 (486)
Q Consensus 109 ~~~----~---~~----~~~~~~Dl~~~i~~l~~~~~~~~-i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~ 175 (486)
+.. . .. ..+.++++.+.+..+.+..+.++ ++|+||||||.+++.+|..+|+ |+++|++++.......
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 211 0 00 01234555555555555557778 5899999999999999999998 9999998876432110
Q ss_pred ---HHH-HHHHHhh-------------hCCchhH-------------------------------------HHHHHHHH-
Q 011425 176 ---MLE-LVDVYKI-------------RLPKFTV-------------------------------------KMAVQYMR- 200 (486)
Q Consensus 176 ---~~~-~~~~~~~-------------~~p~~~~-------------------------------------~~~~~~~~- 200 (486)
+.. ....... ..+.... .....+..
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 188 NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH
Confidence 000 0000000 0000000 00000000
Q ss_pred ---HHHh------------hhhcccccc---cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCC---cEEEEe
Q 011425 201 ---RVIQ------------KKAKFDIMD---LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD---KNIIKF 259 (486)
Q Consensus 201 ---~~~~------------~~~~~~~~~---~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~---~~l~~~ 259 (486)
.... ....++... .+....+.+|++|+|+|+|+.|.++|++.++.+.+.+++. .+++++
T Consensus 268 ~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i 347 (379)
T PRK00175 268 QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI 347 (379)
T ss_pred HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 0000 000000000 1234667889999999999999999999999999998754 256655
Q ss_pred C-C-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 260 D-G-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 260 ~-g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
+ + ||..+ .|+++.+.|.+||.+..
T Consensus 348 ~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 348 DSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred CCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 3 4 99876 89999999999998753
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=181.51 Aligned_cols=230 Identities=17% Similarity=0.177 Sum_probs=140.2
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc---h
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH---E 118 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~---~ 118 (486)
+...+|..|.+..+- +...|+|||+||++++...|..+...| ..||.|+++|+||||.|........+. .
T Consensus 7 ~~~~~g~~l~~~~~g------~~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 7 VVSSDGVRLAVYEWG------DPDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEeeCCEEEEEEEcC------CCCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 344689999887762 234689999999999999999999888 558999999999999997543222211 1
Q ss_pred HHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCC--C-ccEEEEcCCccC-HHHH-----------------H
Q 011425 119 KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFSD-LFDL-----------------M 176 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p--~-v~~lVl~sp~~~-~~~~-----------------~ 176 (486)
++|+..+++.+ +. .+++|+||||||.+++.++.... . +..+++++++.. .... .
T Consensus 80 a~dl~~~i~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (582)
T PRK05855 80 ADDFAAVIDAV----SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARAL 155 (582)
T ss_pred HHHHHHHHHHh----CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHH
Confidence 45555555554 33 45999999999999988877632 2 444444433221 0000 0
Q ss_pred HHHHHHH---hhhCCchhHHH----HHHHHHHHHhhhhc------------------cc-----ccccchhhhCCCCCCC
Q 011425 177 LELVDVY---KIRLPKFTVKM----AVQYMRRVIQKKAK------------------FD-----IMDLNCLKLAPKTFIP 226 (486)
Q Consensus 177 ~~~~~~~---~~~~p~~~~~~----~~~~~~~~~~~~~~------------------~~-----~~~~~~~~~l~~i~~P 226 (486)
....... ....+...... ....+...+..... .. .........+..+++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (582)
T PRK05855 156 GQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVP 235 (582)
T ss_pred HHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCc
Confidence 0000000 00000000000 00000000000000 00 0000011123458899
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHHHhc
Q 011425 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 227 vLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~~~l 283 (486)
+|+|+|++|.++|+.....+.+.++ ...++++++||+.+ .|+.+.+.|.+|+...-
T Consensus 236 ~lii~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 236 VQLIVPTGDPYVRPALYDDLSRWVP-RLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred eEEEEeCCCcccCHHHhccccccCC-cceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 9999999999999998888877665 45677778899977 78999999999998754
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.2e-18 Score=158.21 Aligned_cols=183 Identities=13% Similarity=0.126 Sum_probs=123.0
Q ss_pred cEEEEeCCCCCChhhHHH--HHHHhcc--CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 67 PCVVYCHGNSGCRADANE--AAVILLP--SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~--~~~~L~~--~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
|+|||+||++++...|.. +...+.+ .+|.|+++|+||+| +++.+.+..+.+..+.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCCCeEEEE
Confidence 689999999999998874 3455544 37999999999985 23444445555555678999999
Q ss_pred EcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC
Q 011425 143 RSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK 222 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (486)
|||||.+++.+|..+| . .+|+++|..+....+.....................++... ..+ +. ..+.
T Consensus 68 ~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~~~-----~~-~~i~- 134 (190)
T PRK11071 68 SSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDL----KVM-----QI-DPLE- 134 (190)
T ss_pred ECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHH----Hhc-----CC-ccCC-
Confidence 9999999999999998 3 45788888775444433321110000000000001111111 001 11 1133
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHH
Q 011425 223 TFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 223 i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~ 280 (486)
..+|++++||++|++||++.+.++++.. .+++++| +|.+...+++.+.+.+|+.
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 6678999999999999999999999854 4555676 8998877899999999975
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.6e-18 Score=173.13 Aligned_cols=226 Identities=15% Similarity=0.133 Sum_probs=146.6
Q ss_pred EEEEEecCCCCCCCCCcEEEEeCCCCCChhh-----HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHH
Q 011425 51 QCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125 (486)
Q Consensus 51 ~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-----~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~ 125 (486)
....|.|.. +....++||++||+...... +..++..|+++||.|+++|++|+|.+.....-.. ...+++.++
T Consensus 49 ~l~~~~~~~--~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d-~~~~~~~~~ 125 (350)
T TIGR01836 49 VLYRYTPVK--DNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDD-YINGYIDKC 125 (350)
T ss_pred EEEEecCCC--CcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHH-HHHHHHHHH
Confidence 333565642 12334569999998644333 2578899999999999999999998764321111 113568889
Q ss_pred HHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH---HHH---------HHHHHhhhCCchhH
Q 011425 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL---MLE---------LVDVYKIRLPKFTV 192 (486)
Q Consensus 126 i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~---~~~---------~~~~~~~~~p~~~~ 192 (486)
++++++..+..+++++||||||.+++.+++.+|+ |+++|+++++.++... ... ..... ..+|....
T Consensus 126 v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~ 204 (350)
T TIGR01836 126 VDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTM-GNIPGELL 204 (350)
T ss_pred HHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhc-CCCCHHHH
Confidence 9999988777899999999999999999999987 9999999887653210 000 00000 00110000
Q ss_pred ------------------------------------------------HHHHHHHHHHHhhhhccccccc---chhhhCC
Q 011425 193 ------------------------------------------------KMAVQYMRRVIQKKAKFDIMDL---NCLKLAP 221 (486)
Q Consensus 193 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~ 221 (486)
....+++...+...... .... +....+.
T Consensus 205 ~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~-~g~~~~~~~~~~l~ 283 (350)
T TIGR01836 205 NLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLI-NGEVEIGGRKVDLK 283 (350)
T ss_pred HHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCccc-CCeeEECCEEccHH
Confidence 00000000000000000 0000 0112355
Q ss_pred CCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-CcEEEEeCCCCCCC-----ChHHHHHHHHHHHHH
Q 011425 222 KTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDGDHNSS-----RPQFYYDSVSIFFYN 281 (486)
Q Consensus 222 ~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~l~~~~ggH~~~-----~p~~~~~~I~~FL~~ 281 (486)
++++|+|+++|+.|.++|++.+..+++.++. .++++++++||+.. .++++++.|.+||.+
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 7899999999999999999999999998874 56788889999864 257899999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=159.98 Aligned_cols=248 Identities=18% Similarity=0.202 Sum_probs=157.0
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh--HHHHHHHhccCCeEEEEEcCCCCCCCCC
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
...|.++ .+..+||..+-.....+. .....|.||++||+.|+... ...++..+.++||.||+++.|||+.+..
T Consensus 46 ~~~~~re--~v~~pdg~~~~ldw~~~p---~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n 120 (345)
T COG0429 46 KVAYTRE--RLETPDGGFIDLDWSEDP---RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEAN 120 (345)
T ss_pred ccccceE--EEEcCCCCEEEEeeccCc---cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcc
Confidence 3455555 455677776666555432 44567999999999876443 3457788899999999999999998864
Q ss_pred C-CCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc-CCC--ccEEEEcCCccCHHHHHHHHHHHHh-
Q 011425 110 D-YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE-DPS--IAGMVLDSAFSDLFDLMLELVDVYK- 184 (486)
Q Consensus 110 ~-~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~-~p~--v~~lVl~sp~~~~~~~~~~~~~~~~- 184 (486)
. +.-+.....+|+..++++++......++..+|+|+||.+...+..+ ..+ +.+.+.++.+.++......+...+.
T Consensus 121 ~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~ 200 (345)
T COG0429 121 TSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSL 200 (345)
T ss_pred cCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhh
Confidence 2 2211112259999999999998788999999999999555445444 333 7777777776665332222211111
Q ss_pred hhCCchhHHHHHHHHHH------------------HHhhhhccccc----------------ccchhhhCCCCCCCEEEE
Q 011425 185 IRLPKFTVKMAVQYMRR------------------VIQKKAKFDIM----------------DLNCLKLAPKTFIPALFG 230 (486)
Q Consensus 185 ~~~p~~~~~~~~~~~~~------------------~~~~~~~~~~~----------------~~~~~~~l~~i~~PvLii 230 (486)
..+.......+...+.. .+.....|+.. ..+....+++|.+|+|||
T Consensus 201 ~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii 280 (345)
T COG0429 201 RLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLII 280 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEE
Confidence 00000000111111100 00011111111 124567788999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHcCCCcEEEEeC-CCCCCC------ChH-HHHHHHHHHHHHhcC
Q 011425 231 HASEDKFIRARHSDLIFNAYAGDKNIIKFD-GDHNSS------RPQ-FYYDSVSIFFYNVLH 284 (486)
Q Consensus 231 ~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~-ggH~~~------~p~-~~~~~I~~FL~~~l~ 284 (486)
|+.+|++++++..-......++.+.+.+.+ |||... ++. ...+.+.+||+..+.
T Consensus 281 ~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 281 NAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 999999999987766666566777777776 699744 233 455778899887654
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=180.20 Aligned_cols=129 Identities=21% Similarity=0.302 Sum_probs=106.2
Q ss_pred EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh----hHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch
Q 011425 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA----DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~----~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~ 118 (486)
+..||.+|.+.+|+|.+ .++.|+||++||++.... ........|+++||.|+++|+||+|.|++........+
T Consensus 2 ~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDE 78 (550)
T ss_pred cCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCccc
Confidence 45799999999999963 357899999999997653 12234567889999999999999999998765443455
Q ss_pred HHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH
Q 011425 119 KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD 174 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~ 174 (486)
++|+.++|+|+..+... .+|+++|+||||.+++.+|..+|. ++++|+.++..+...
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 89999999999887433 699999999999999999998876 999999888876554
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.5e-18 Score=160.83 Aligned_cols=188 Identities=24% Similarity=0.343 Sum_probs=130.5
Q ss_pred HHHHHHHhccCCeEEEEEcCCCCCCCCCC-----CCCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHH
Q 011425 82 ANEAAVILLPSNITLFTLDFSGSGLSDGD-----YVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYG 154 (486)
Q Consensus 82 ~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~-----~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A 154 (486)
|......|+++||.|+.+|+||.+..... ....+...++|+.++++++.++..+ ++|+|+|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44567789999999999999998754322 2222334489999999999988644 7999999999999999999
Q ss_pred hcCCC-ccEEEEcCCccCHHHHHHH---HHH-HH-hhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC--CCCC
Q 011425 155 AEDPS-IAGMVLDSAFSDLFDLMLE---LVD-VY-KIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIP 226 (486)
Q Consensus 155 ~~~p~-v~~lVl~sp~~~~~~~~~~---~~~-~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~P 226 (486)
..+|+ ++++|..+|+.++...... +.. .+ ....+..... .+. ..++...+.+ +++|
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~------------~~s~~~~~~~~~~~~P 146 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPE----FYR------------ELSPISPADNVQIKPP 146 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHH----HHH------------HHHHGGGGGGCGGGSE
T ss_pred cccceeeeeeeccceecchhcccccccccccccccccCccchhhh----hhh------------hhccccccccccCCCC
Confidence 98998 8999999988764332211 100 00 0001100000 000 0122233334 7899
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCC---ChHHHHHHHHHHHHHhcCC
Q 011425 227 ALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 227 vLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~~~l~~ 285 (486)
+||+||++|..||++++..+++.+. .+.+++++++ ||... ....+.+.+.+||+++++.
T Consensus 147 ~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 147 VLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999998875 4588999998 99766 3457889999999999863
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=169.85 Aligned_cols=250 Identities=18% Similarity=0.196 Sum_probs=160.2
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCC--CCCCCcEEEEeCCCCCChhhHH------HHHHHhccCCeEEEEEcCCC
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFP--EDTPLPCVVYCHGNSGCRADAN------EAAVILLPSNITLFTLDFSG 103 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~--~~~~~p~VV~lHG~gg~~~~~~------~~~~~L~~~Gy~Vv~~D~rG 103 (486)
...|+.++..+.+.||..|....+ |...+ ....+|+||++||++++...|. .++..|+++||.|+++|+||
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri-~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG 117 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRV-SSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRG 117 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEc-CCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccc
Confidence 345666888899999999988655 43211 1234689999999998877762 35567888999999999999
Q ss_pred CCCCCCC---------CCCCCcch--HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC----ccEEEEcCC
Q 011425 104 SGLSDGD---------YVSLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSA 168 (486)
Q Consensus 104 ~G~S~~~---------~~~~~~~~--~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~----v~~lVl~sp 168 (486)
++.+.+. +....+++ ..|+.++++++.+.. ..+++++||||||.+++.++ ..|+ |+.+++++|
T Consensus 118 ~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 118 TRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT-NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCP 195 (395)
T ss_pred cccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc-CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcc
Confidence 8866321 11233444 369999999998653 37999999999999998555 5665 778888877
Q ss_pred ccCHHH----HH---H-----HHHHHHhh--hCCch-hHHHH--------------------------------------
Q 011425 169 FSDLFD----LM---L-----ELVDVYKI--RLPKF-TVKMA-------------------------------------- 195 (486)
Q Consensus 169 ~~~~~~----~~---~-----~~~~~~~~--~~p~~-~~~~~-------------------------------------- 195 (486)
...... .. . .+...++. ..|.. ....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~p 275 (395)
T PLN02872 196 ISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEP 275 (395)
T ss_pred hhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCC
Confidence 643210 00 0 00000000 00100 00000
Q ss_pred --------HHHHHHHHhh-hhcccccc-cc---------hhhhCCCC--CCCEEEEEeCCCCCCCHHHHHHHHHHcCCCc
Q 011425 196 --------VQYMRRVIQK-KAKFDIMD-LN---------CLKLAPKT--FIPALFGHASEDKFIRARHSDLIFNAYAGDK 254 (486)
Q Consensus 196 --------~~~~~~~~~~-~~~~~~~~-~~---------~~~~l~~i--~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~ 254 (486)
..+..-.... ...|+... .+ +.-.+.++ ++|+++++|+.|.++++..+..+.+.++...
T Consensus 276 agtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~ 355 (395)
T PLN02872 276 HPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKP 355 (395)
T ss_pred CcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCcc
Confidence 0000000000 00111110 01 11234556 5799999999999999999999999998756
Q ss_pred EEEEeCC-CCC--CC---ChHHHHHHHHHHHHHhcC
Q 011425 255 NIIKFDG-DHN--SS---RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 255 ~l~~~~g-gH~--~~---~p~~~~~~I~~FL~~~l~ 284 (486)
+++.+++ +|. .+ .++.+++.|.+||++...
T Consensus 356 ~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 356 ELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred EEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 7878887 996 21 588899999999997654
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-16 Score=159.02 Aligned_cols=269 Identities=15% Similarity=0.153 Sum_probs=163.2
Q ss_pred CCCCCCCccccccccc---------ccCcceeEEEEEEEcCCCcEEEEEEEecCCCC---CCCCCcEEEEeCCCCCChhh
Q 011425 14 RAEYNPDQYLWERDFM---------LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFP---EDTPLPCVVYCHGNSGCRAD 81 (486)
Q Consensus 14 ~~~y~~~~~~~~~~~~---------~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~---~~~~~p~VV~lHG~gg~~~~ 81 (486)
...|.|..|.+...++ ...+.|+++ -++.+||..+...++.+.... +.+..|+||++||+.+++..
T Consensus 63 ~~~y~p~~w~~~ghlQT~~~~~~~~~p~~~y~Re--ii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~ 140 (409)
T KOG1838|consen 63 EEKYLPTLWLFSGHLQTLLLSFFGSKPPVEYTRE--IIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHE 140 (409)
T ss_pred ccccccceeecCCeeeeeehhhcCCCCCCcceeE--EEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChh
Confidence 3456665665555553 234566444 466689999999887665432 23577999999999876443
Q ss_pred --HHHHHHHhccCCeEEEEEcCCCCCCCCC-CCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC
Q 011425 82 --ANEAAVILLPSNITLFTLDFSGSGLSDG-DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (486)
Q Consensus 82 --~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~-~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p 158 (486)
...++..+.+.||.|++++.||+|.+.- .+.-+.....+|+.+++++++.+++..+++.+|.||||++...|+.+..
T Consensus 141 ~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g 220 (409)
T KOG1838|consen 141 SYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEG 220 (409)
T ss_pred HHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhcc
Confidence 3557777888899999999999998862 2222222337999999999999999899999999999999999998865
Q ss_pred C----ccEEEEcCCccCH--HHHHHH-----HHHHH-hhhCC-----chh--H------------HHHHHHHHHHHhhhh
Q 011425 159 S----IAGMVLDSAFSDL--FDLMLE-----LVDVY-KIRLP-----KFT--V------------KMAVQYMRRVIQKKA 207 (486)
Q Consensus 159 ~----v~~lVl~sp~~~~--~~~~~~-----~~~~~-~~~~p-----~~~--~------------~~~~~~~~~~~~~~~ 207 (486)
+ +.|+++.+|+..+ ...+.. ..... ...+. ... . +...++-........
T Consensus 221 ~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~ 300 (409)
T KOG1838|consen 221 DNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMF 300 (409)
T ss_pred CCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhc
Confidence 4 4555555555422 111100 00000 00000 000 0 000000000000001
Q ss_pred ccc-----ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEe-CCCCCCC------ChHHHHHH-
Q 011425 208 KFD-----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKF-DGDHNSS------RPQFYYDS- 274 (486)
Q Consensus 208 ~~~-----~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~-~ggH~~~------~p~~~~~~- 274 (486)
.+. ....+....+.+|++|+|+|++.+|+++|....-.-...-++++-+++- .|||... .+..+++.
T Consensus 301 gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~ 380 (409)
T KOG1838|consen 301 GFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKL 380 (409)
T ss_pred CCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHH
Confidence 111 1122566788899999999999999999986222211112233434433 3699744 34456666
Q ss_pred HHHHHHHhcC
Q 011425 275 VSIFFYNVLH 284 (486)
Q Consensus 275 I~~FL~~~l~ 284 (486)
+.+|+.....
T Consensus 381 l~ef~~~~~~ 390 (409)
T KOG1838|consen 381 LVEFLGNAIF 390 (409)
T ss_pred HHHHHHHHHh
Confidence 7888877654
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=189.37 Aligned_cols=218 Identities=14% Similarity=0.096 Sum_probs=140.7
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-----CCCcchHHHHHHHHHHHHhcCCCCcEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-----SLGWHEKDDLKVVVSYLRGNKQTSRIG 139 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-----~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 139 (486)
..|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..... ......++++.+.+..+.+..+.++++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999988876 59999999999999974321 011122445555444444444668999
Q ss_pred EEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH-HH---HH-----HH--------HHh-hhCCchhH------HH
Q 011425 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL-ML---EL-----VD--------VYK-IRLPKFTV------KM 194 (486)
Q Consensus 140 LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~-~~---~~-----~~--------~~~-~~~p~~~~------~~ 194 (486)
|+||||||.+++.++.++|+ |+++|++++....... .. .. .. .+. ........ ..
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 1528 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPH 1528 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHH
Confidence 99999999999999999998 9999998764321110 00 00 00 000 00000000 00
Q ss_pred HHHHHHHHHhh---------hhccc-ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCC-----------
Q 011425 195 AVQYMRRVIQK---------KAKFD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD----------- 253 (486)
Q Consensus 195 ~~~~~~~~~~~---------~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~----------- 253 (486)
....+...... ...+. ....+....+.++++|+|+|+|++|.+++ ..+.++.+.+++.
T Consensus 1529 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~ 1607 (1655)
T PLN02980 1529 FNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEI 1607 (1655)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccc
Confidence 00000000000 00000 01123345678899999999999999875 6667777776542
Q ss_pred cEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhcC
Q 011425 254 KNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 254 ~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l~ 284 (486)
.+++++++ ||..+ +|+.+.+.|.+||.+.-.
T Consensus 1608 a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1608 IEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred eEEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 47888887 99876 899999999999998653
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-17 Score=148.62 Aligned_cols=227 Identities=18% Similarity=0.207 Sum_probs=151.8
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCC-ChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCCCCCCCcch-HHHH
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG-CRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg-~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl 122 (486)
+|.+|.+.-| +.+ ...|+++.|.-| ...+|.+....+-+. .+.|+++|.||+|.|......+..+. ..|.
T Consensus 29 ng~ql~y~~~------G~G-~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da 101 (277)
T KOG2984|consen 29 NGTQLGYCKY------GHG-PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDA 101 (277)
T ss_pred cCceeeeeec------CCC-CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhH
Confidence 6888887765 222 346677777655 456677766665443 49999999999999986655555433 6788
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH--HH-----HHHHHHHHh-hhCC---ch
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--DL-----MLELVDVYK-IRLP---KF 190 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~--~~-----~~~~~~~~~-~~~p---~~ 190 (486)
..+++.++.. ...++.|+|+|-||.+|+.+|+++++ |..+|+.++..-+. +. ++....+.. .+.| .+
T Consensus 102 ~~avdLM~aL-k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Y 180 (277)
T KOG2984|consen 102 EYAVDLMEAL-KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHY 180 (277)
T ss_pred HHHHHHHHHh-CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhc
Confidence 8888877665 66899999999999999999999998 99988877654321 11 111111100 0111 11
Q ss_pred hHHHHHHHHHHHHhhhhcc-ccccc-chhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEe-CCCCCCC-
Q 011425 191 TVKMAVQYMRRVIQKKAKF-DIMDL-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKF-DGDHNSS- 266 (486)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~-~ggH~~~- 266 (486)
....+...+..+......+ .+-+- -+...+++++||+||+||+.|++++..++--+....+.. ++.++ +|+|++.
T Consensus 181 g~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a-~~~~~peGkHn~hL 259 (277)
T KOG2984|consen 181 GPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA-KVEIHPEGKHNFHL 259 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc-eEEEccCCCcceee
Confidence 1222222222222221111 11111 145678999999999999999999988888777776554 45555 4699977
Q ss_pred -ChHHHHHHHHHHHHH
Q 011425 267 -RPQFYYDSVSIFFYN 281 (486)
Q Consensus 267 -~p~~~~~~I~~FL~~ 281 (486)
.+++|...+.+||+.
T Consensus 260 rya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 260 RYAKEFNKLVLDFLKS 275 (277)
T ss_pred echHHHHHHHHHHHhc
Confidence 899999999999985
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.7e-17 Score=146.67 Aligned_cols=230 Identities=22% Similarity=0.273 Sum_probs=159.3
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh--HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
..+.+.+++..+..+.+.+. ..+...+||++||+-++... +..++..|.+.||.++.+|++|.|+|.+.+..
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh------~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~ 82 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLH------ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY 82 (269)
T ss_pred eeeEEEeccCCCchhhccee------ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc
Confidence 44667788888877777554 44678899999999887654 34577889999999999999999999988765
Q ss_pred CCc-chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHH-HH--------HHHH
Q 011425 114 LGW-HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLML-EL--------VDVY 183 (486)
Q Consensus 114 ~~~-~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~-~~--------~~~~ 183 (486)
..+ .+++|+..+++++... ..---+++|||-||.+++.+|.+++++.-+|-+++-.+...... .+ ....
T Consensus 83 Gn~~~eadDL~sV~q~~s~~-nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~G 161 (269)
T KOG4667|consen 83 GNYNTEADDLHSVIQYFSNS-NRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQG 161 (269)
T ss_pred CcccchHHHHHHHHHHhccC-ceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCC
Confidence 544 3489999999999763 22233689999999999999999999999999888776544332 11 1100
Q ss_pred hhhCCc----hhHHHHHHHHHHHHhhhhcccccccchhhhCC--CCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEE
Q 011425 184 KIRLPK----FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP--KTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNII 257 (486)
Q Consensus 184 ~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~ 257 (486)
.+..+. +...+...-+.. + ...+..+.-. ..+||+|-+||..|.+||.+.+.++++.+++ +.+.
T Consensus 162 fid~~~rkG~y~~rvt~eSlmd----r-----Lntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~ 231 (269)
T KOG4667|consen 162 FIDVGPRKGKYGYRVTEESLMD----R-----LNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLE 231 (269)
T ss_pred ceecCcccCCcCceecHHHHHH----H-----HhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-CceE
Confidence 000110 100000000000 0 0011111211 3579999999999999999999999999987 7788
Q ss_pred EeCC-CCCCC-ChHHHHHHHHHHHHHh
Q 011425 258 KFDG-DHNSS-RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 258 ~~~g-gH~~~-~p~~~~~~I~~FL~~~ 282 (486)
+++| +|.+. ...+.......|+...
T Consensus 232 iIEgADHnyt~~q~~l~~lgl~f~k~r 258 (269)
T KOG4667|consen 232 IIEGADHNYTGHQSQLVSLGLEFIKTR 258 (269)
T ss_pred EecCCCcCccchhhhHhhhcceeEEee
Confidence 8998 99987 4555555555555433
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.7e-17 Score=152.34 Aligned_cols=190 Identities=23% Similarity=0.276 Sum_probs=132.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCC-CCCCCCCC--Cc---------c
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGL-SDGDYVSL--GW---------H 117 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~-S~~~~~~~--~~---------~ 117 (486)
+.+++..|.+ .++.|.||++|+..|-......++..|+++||.|+++|+-+... ........ .+ .
T Consensus 1 ~~ay~~~P~~---~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (218)
T PF01738_consen 1 IDAYVARPEG---GGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQ 77 (218)
T ss_dssp EEEEEEEETT---SSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHH
T ss_pred CeEEEEeCCC---CCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHH
Confidence 3567788863 25789999999999988778889999999999999999864433 11111100 00 1
Q ss_pred hHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 118 EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
...++.+++++|+++... .+|+++|+|+||.+++.+|...+.++++|...|.....
T Consensus 78 ~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~---------------------- 135 (218)
T PF01738_consen 78 VAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPP---------------------- 135 (218)
T ss_dssp HHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGG----------------------
T ss_pred HHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCC----------------------
Confidence 146778889999998633 79999999999999999999987799999887711100
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc---CCCcEEEEeCC-CCCCCC----
Q 011425 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHNSSR---- 267 (486)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~---- 267 (486)
.......++++|+++++|+.|+.++.+....+.+.+ +...++++|+| +|.+..
T Consensus 136 -------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 136 -------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp -------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred -------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 111234467899999999999999999888888777 45789999998 898661
Q ss_pred ------hHHHHHHHHHHHHHhc
Q 011425 268 ------PQFYYDSVSIFFYNVL 283 (486)
Q Consensus 268 ------p~~~~~~I~~FL~~~l 283 (486)
.+..++.+.+||+++|
T Consensus 197 ~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 197 PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T--HHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHhcC
Confidence 2466788889998765
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.73 E-value=6e-16 Score=152.88 Aligned_cols=225 Identities=16% Similarity=0.204 Sum_probs=137.3
Q ss_pred EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH---HHHHhccCCeEEEEEcCCCCCCC-CCC--------
Q 011425 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLS-DGD-------- 110 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~S-~~~-------- 110 (486)
...-|..+.+.+|+|... .+.+.|+|+|+||++++...|.. +...+...|+.|+++|..++|.. .+.
T Consensus 25 s~~l~~~~~~~vy~P~~~-~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~ 103 (283)
T PLN02442 25 SSTLGCSMTFSVYFPPAS-DSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGV 103 (283)
T ss_pred ccccCCceEEEEEcCCcc-cCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCC
Confidence 335788999999999732 34578999999999988776643 33556677999999998876621 000
Q ss_pred ----C---CCCC---cc----hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH
Q 011425 111 ----Y---VSLG---WH----EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL 175 (486)
Q Consensus 111 ----~---~~~~---~~----~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~ 175 (486)
+ .... +. ..+++..+++......+.++++|+||||||++++.++.++|+ ++++++++|..++...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~ 183 (283)
T PLN02442 104 GAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINC 183 (283)
T ss_pred CcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccC
Confidence 0 0000 01 133444444443333355889999999999999999999998 8999999888653210
Q ss_pred HHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHH-HHHHHHH---HcC
Q 011425 176 MLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFN---AYA 251 (486)
Q Consensus 176 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~---~l~ 251 (486)
... .. ....++........ .....+....+...++|+++++|++|.+++.. .+..+++ ..+
T Consensus 184 ~~~-~~------------~~~~~~g~~~~~~~--~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g 248 (283)
T PLN02442 184 PWG-QK------------AFTNYLGSDKADWE--EYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAG 248 (283)
T ss_pred chh-hH------------HHHHHcCCChhhHH--HcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcC
Confidence 000 00 00000000000000 00112333445567899999999999999863 2444444 344
Q ss_pred CCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 011425 252 GDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 252 ~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l 283 (486)
.+.+++++++ +|....-..+.+....|..+.+
T Consensus 249 ~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~~~~ 281 (283)
T PLN02442 249 APVTLRLQPGYDHSYFFIATFIDDHINHHAQAL 281 (283)
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHHHHHHh
Confidence 5678899998 9976533444444445554443
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-16 Score=155.44 Aligned_cols=135 Identities=19% Similarity=0.280 Sum_probs=106.0
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC----hhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC----RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~----~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~ 115 (486)
+.+.+..|. +.++++.|. +.++.|+|||+||+++. ...|..++..|+++||.|+++|+||||.|.+......
T Consensus 3 ~~l~~~~g~-~~~~~~~p~---~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPV---AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EEecCCCCc-EEEEEecCC---CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCC
Confidence 455666665 445566664 23457899999999864 3345667888998999999999999999987655444
Q ss_pred cch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHH
Q 011425 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL 179 (486)
Q Consensus 116 ~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~ 179 (486)
+.. ++|+..+++++++. +..+++|+||||||.+++.+|..+|+ ++++|+++|.......+..+
T Consensus 79 ~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~ 143 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQF 143 (266)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHH
Confidence 433 68899999999876 56899999999999999999999987 99999999988876655553
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-15 Score=148.44 Aligned_cols=226 Identities=15% Similarity=0.198 Sum_probs=139.9
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHH--HHHh-ccCCeEEEEEcC--CCCCCCCCC-
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVIL-LPSNITLFTLDF--SGSGLSDGD- 110 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~--~~~L-~~~Gy~Vv~~D~--rG~G~S~~~- 110 (486)
+.+.+... -+..+.+.+|+|++.. ..+.|+|||+||++++...|... +..+ .+.||.|+++|. +|+|.+...
T Consensus 14 ~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~ 92 (275)
T TIGR02821 14 GFYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDD 92 (275)
T ss_pred EEEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcc
Confidence 44444433 5778889999997532 34579999999999988777532 2334 456999999998 555533210
Q ss_pred ----------CC-------CCCcchHHHH-HHHHHHHHhcC--CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCc
Q 011425 111 ----------YV-------SLGWHEKDDL-KVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (486)
Q Consensus 111 ----------~~-------~~~~~~~~Dl-~~~i~~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~ 169 (486)
+. ...+.....+ .++...+.+.+ +.++++|+||||||++++.++..+|+ ++++++++|.
T Consensus 93 ~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 93 AWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred cccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 00 0011112222 23333344432 34789999999999999999999998 8999999888
Q ss_pred cCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCC--CCCCCEEEEEeCCCCCCCH-HHHHHH
Q 011425 170 SDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP--KTFIPALFGHASEDKFIRA-RHSDLI 246 (486)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~PvLii~G~~D~~vp~-~~~~~l 246 (486)
.+.... + ... ..+...+..... .....++...+. ....|+++++|+.|+.++. .....+
T Consensus 173 ~~~~~~------------~-~~~----~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~ 234 (275)
T TIGR02821 173 VAPSRC------------P-WGQ----KAFSAYLGADEA-AWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAF 234 (275)
T ss_pred cCcccC------------c-chH----HHHHHHhccccc-chhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHH
Confidence 653210 0 000 001111100000 000111111111 2457999999999999998 444555
Q ss_pred HHHc---CCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHh
Q 011425 247 FNAY---AGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 247 ~~~l---~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~ 282 (486)
.+.+ +...++..++| +|.+.....+....++|+.++
T Consensus 235 ~~~l~~~g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 235 EQACRAAGQALTLRRQAGYDHSYYFIASFIADHLRHHAER 274 (275)
T ss_pred HHHHHHcCCCeEEEEeCCCCccchhHHHhHHHHHHHHHhh
Confidence 5544 34678889998 999887778888888888765
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.3e-16 Score=169.13 Aligned_cols=245 Identities=16% Similarity=0.131 Sum_probs=167.8
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh--hhHHHHHHHhccCCeEEEEEcCCCCCCCCCC
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR--ADANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~--~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
..+..+.+.+++.||..|.+++..++.....++.|+||++||..+.. ..|......|+++||.|+.+++||.|.-...
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 35677899999999999998665544322345679999999987665 3466666789999999999999998766533
Q ss_pred CCCC-----CcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHH
Q 011425 111 YVSL-----GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (486)
Q Consensus 111 ~~~~-----~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~ 182 (486)
+... .....+|+.+++++|.++.-. ++++++|.|.||+++..++.++|+ ++++|+..|+.++...+..-
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~--- 568 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDE--- 568 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccC---
Confidence 2221 123479999999999887433 799999999999999999999998 99999999998866543110
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccc-cccchhhhCCCCCCC-EEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEE
Q 011425 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDI-MDLNCLKLAPKTFIP-ALFGHASEDKFIRARHSDLIFNAYA---GDKNII 257 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P-vLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~ 257 (486)
..|.... ....+ ... .....+.. ..+++...+.+++.| +||++|.+|..||+.++.++..++. .+..++
T Consensus 569 ---~~p~~~~-~~~e~-G~p-~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~v 642 (686)
T PRK10115 569 ---SIPLTTG-EFEEW-GNP-QDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLL 642 (686)
T ss_pred ---CCCCChh-HHHHh-CCC-CCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceE
Confidence 0110000 00000 000 00001111 234677788888899 5677999999999999999998875 344556
Q ss_pred Ee---CC-CCCCC-ChHHHH---HHHHHHHHHhcCCC
Q 011425 258 KF---DG-DHNSS-RPQFYY---DSVSIFFYNVLHPP 286 (486)
Q Consensus 258 ~~---~g-gH~~~-~p~~~~---~~I~~FL~~~l~~~ 286 (486)
++ ++ ||... .....+ .....|+-..+...
T Consensus 643 l~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~ 679 (686)
T PRK10115 643 LLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGT 679 (686)
T ss_pred EEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCc
Confidence 66 54 99854 223333 33456777766543
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=161.42 Aligned_cols=231 Identities=20% Similarity=0.289 Sum_probs=140.3
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHH-HHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA-VILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~-~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
+-+.++|+..+ ..|.+++++|. .+++.|+||++.|+.+...++..+. ..|+.+|++++++|+||.|.|...+...
T Consensus 164 ~i~~v~iP~eg-~~I~g~LhlP~---~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~ 239 (411)
T PF06500_consen 164 PIEEVEIPFEG-KTIPGYLHLPS---GEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ 239 (411)
T ss_dssp EEEEEEEEETT-CEEEEEEEESS---SSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S
T ss_pred CcEEEEEeeCC-cEEEEEEEcCC---CCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCc
Confidence 33555565544 89999999997 4578899999999999998876654 5688999999999999999987544333
Q ss_pred CcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcC-CCccEEEEcCCccC-HHHHHHHHHHHHhhhCCch
Q 011425 115 GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAED-PSIAGMVLDSAFSD-LFDLMLELVDVYKIRLPKF 190 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~-p~v~~lVl~sp~~~-~~~~~~~~~~~~~~~~p~~ 190 (486)
... .-..++++||.....+ .+|+++|.|+||++|+.+|... ++|+++|..+++.. +..... .....|..
T Consensus 240 D~~--~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~-----~~~~~P~m 312 (411)
T PF06500_consen 240 DSS--RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPE-----WQQRVPDM 312 (411)
T ss_dssp -CC--HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HH-----HHTTS-HH
T ss_pred CHH--HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHH-----HHhcCCHH
Confidence 322 4567889999988655 6999999999999999999765 56999999988753 221110 01112222
Q ss_pred hHHHHHHHH-------HHHHhhhhcccccccchhhhC--CCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC
Q 011425 191 TVKMAVQYM-------RRVIQKKAKFDIMDLNCLKLA--PKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG 261 (486)
Q Consensus 191 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g 261 (486)
....+...+ .........+.+.. ...+ .++.+|+|.+.|++|+++|.+..+.++..-... +...++.
T Consensus 313 y~d~LA~rlG~~~~~~~~l~~el~~~SLk~---qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g-k~~~~~~ 388 (411)
T PF06500_consen 313 YLDVLASRLGMAAVSDESLRGELNKFSLKT---QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG-KALRIPS 388 (411)
T ss_dssp HHHHHHHHCT-SCE-HHHHHHHGGGGSTTT---TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-S
T ss_pred HHHHHHHHhCCccCCHHHHHHHHHhcCcch---hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC-ceeecCC
Confidence 111111100 00111111222211 1123 678899999999999999999998888765444 4555554
Q ss_pred -C-CCCCChHHHHHHHHHHHHHhc
Q 011425 262 -D-HNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 262 -g-H~~~~p~~~~~~I~~FL~~~l 283 (486)
. |.. -+.....+.+||+..+
T Consensus 389 ~~~~~g--y~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 389 KPLHMG--YPQALDEIYKWLEDKL 410 (411)
T ss_dssp SSHHHH--HHHHHHHHHHHHHHHH
T ss_pred Cccccc--hHHHHHHHHHHHHHhc
Confidence 2 432 2567788899998764
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-16 Score=152.20 Aligned_cols=217 Identities=17% Similarity=0.196 Sum_probs=136.7
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHH----H------HHhccCCeEEEEEcCCCCCCCCCCCCCCC
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA----A------VILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~----~------~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~ 115 (486)
||.+|.+.+|+| +....++.|+||..|+++......... . ..|+++||.||++|.||.|.|+|.+....
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMS 79 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTS
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCC
Confidence 799999999999 444678899999999999654221111 1 12889999999999999999999987755
Q ss_pred cchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCC-CccEEEEcCCccCHHH---------------HH--
Q 011425 116 WHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDP-SIAGMVLDSAFSDLFD---------------LM-- 176 (486)
Q Consensus 116 ~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p-~v~~lVl~sp~~~~~~---------------~~-- 176 (486)
..+.+|..++|+|+..+... ++|+++|.|++|.+++.+|+..| .++++|...+..++.. ..
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w~~ 159 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGWED 159 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccccchhHHHH
Confidence 56799999999999998433 79999999999999999999555 4999999776554322 11
Q ss_pred -HHHHHHHhhhCCch--hHHHHH-------H----------HHHHHHhhhh-cccccccchhhhCCCCCCCEEEEEeCCC
Q 011425 177 -LELVDVYKIRLPKF--TVKMAV-------Q----------YMRRVIQKKA-KFDIMDLNCLKLAPKTFIPALFGHASED 235 (486)
Q Consensus 177 -~~~~~~~~~~~p~~--~~~~~~-------~----------~~~~~~~~~~-~~~~~~~~~~~~l~~i~~PvLii~G~~D 235 (486)
.............. ...... . +...+..... ...+...+....+.++++|+|++.|..|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~Gw~D 239 (272)
T PF02129_consen 160 LQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLIVGGWYD 239 (272)
T ss_dssp HHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEETTC
T ss_pred HHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEEecccCC
Confidence 01111111111100 000000 0 0111110000 0011122333456889999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCc----EEEEeCCCCC
Q 011425 236 KFIRARHSDLIFNAYAGDK----NIIKFDGDHN 264 (486)
Q Consensus 236 ~~vp~~~~~~l~~~l~~~~----~l~~~~ggH~ 264 (486)
..+. ..+...++.+.... .+++-+++|.
T Consensus 240 ~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 240 TLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp SSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred cccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 7776 77778888876544 7888888996
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.6e-16 Score=146.99 Aligned_cols=177 Identities=17% Similarity=0.160 Sum_probs=124.0
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCC---CC-CC---CCCc-ch-------HHHHHHHH
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD---GD-YV---SLGW-HE-------KDDLKVVV 126 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~---~~-~~---~~~~-~~-------~~Dl~~~i 126 (486)
...+.|+||++||+|++...|..++..|...++.+..++++|..... +. +. .... .. .+.+.+++
T Consensus 12 ~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 12 DKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 34567999999999999999999999998776656666666653221 10 00 0000 00 22344455
Q ss_pred HHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHH
Q 011425 127 SYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVI 203 (486)
Q Consensus 127 ~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 203 (486)
+++..+.+. ++|+|+|||+||.+++.++..+|+ +.++|+.++.... .+
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------------~~--------------- 142 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------------LP--------------- 142 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------cc---------------
Confidence 666555444 689999999999999999998888 5667766553210 00
Q ss_pred hhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCCChHHHHHHHHHHH
Q 011425 204 QKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFF 279 (486)
Q Consensus 204 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~p~~~~~~I~~FL 279 (486)
......+|++++||++|++||++.+.++.+.+. ...+++.+++ ||... .+..+.+.+||
T Consensus 143 ---------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~--~~~~~~~~~~l 205 (232)
T PRK11460 143 ---------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID--PRLMQFALDRL 205 (232)
T ss_pred ---------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC--HHHHHHHHHHH
Confidence 001235899999999999999999998888775 3567788887 99875 56778888899
Q ss_pred HHhcC
Q 011425 280 YNVLH 284 (486)
Q Consensus 280 ~~~l~ 284 (486)
.+.+.
T Consensus 206 ~~~l~ 210 (232)
T PRK11460 206 RYTVP 210 (232)
T ss_pred HHHcc
Confidence 88874
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=136.47 Aligned_cols=193 Identities=20% Similarity=0.297 Sum_probs=146.6
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CC--hhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GC--RADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~--~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
.++.+..+.|. |.+ .|.|. .....|+.|++|... |+ -.....++..|.++||.++.+|+||.|.|.|.+.
T Consensus 5 ~~v~i~Gp~G~-le~-~~~~~---~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD 79 (210)
T COG2945 5 PTVIINGPAGR-LEG-RYEPA---KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD 79 (210)
T ss_pred CcEEecCCccc-cee-ccCCC---CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc
Confidence 45556655553 333 34453 346789999999763 32 2334567788999999999999999999999875
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCCcE-EEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchh
Q 011425 113 SLGWHEKDDLKVVVSYLRGNKQTSRI-GLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (486)
Q Consensus 113 ~~~~~~~~Dl~~~i~~l~~~~~~~~i-~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~ 191 (486)
. +.-+.+|+.++++|++++.+..+. .|.|+|+|+++++.+|.+.|++...+.+.|..+.++.
T Consensus 80 ~-GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~df---------------- 142 (210)
T COG2945 80 N-GIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDF---------------- 142 (210)
T ss_pred C-CcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhh----------------
Confidence 4 446789999999999998776554 7899999999999999999998888888777662110
Q ss_pred HHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-ChH
Q 011425 192 VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQ 269 (486)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-~p~ 269 (486)
..+.-+.+|.++|+|+.|.++++....+.++.. ..+++.+++ +|++. .-.
T Consensus 143 --------------------------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~--~~~~i~i~~a~HFF~gKl~ 194 (210)
T COG2945 143 --------------------------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI--KITVITIPGADHFFHGKLI 194 (210)
T ss_pred --------------------------hhccCCCCCceeEecChhhhhcHHHHHHhhcCC--CCceEEecCCCceecccHH
Confidence 123345689999999999999999888888763 334555555 99988 567
Q ss_pred HHHHHHHHHHH
Q 011425 270 FYYDSVSIFFY 280 (486)
Q Consensus 270 ~~~~~I~~FL~ 280 (486)
.+.+.+.+|+.
T Consensus 195 ~l~~~i~~~l~ 205 (210)
T COG2945 195 ELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHhh
Confidence 88899999985
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=151.13 Aligned_cols=200 Identities=14% Similarity=0.094 Sum_probs=135.4
Q ss_pred cccccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCC
Q 011425 27 DFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGL 106 (486)
Q Consensus 27 ~~~~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~ 106 (486)
.|.-+.......++.+.+.-...+.+.+|+|. ..+..|+|||+||++.+...|..+++.|+++||.|+++|++|++.
T Consensus 16 ~~~~g~~~~~~~~~~~~~~~~~~~p~~v~~P~---~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~ 92 (313)
T PLN00021 16 VFETGKFPVELITVDESSRPSPPKPLLVATPS---EAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAG 92 (313)
T ss_pred ccccCCceeEEEEecCCCcCCCCceEEEEeCC---CCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCC
Confidence 34333333344444443334456888899996 446789999999999998889999999999999999999998653
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHhc----------CCCCcEEEEEEcchHHHHHHHHhcCC------CccEEEEcCCcc
Q 011425 107 SDGDYVSLGWHEKDDLKVVVSYLRGN----------KQTSRIGLWGRSMGAVTSLLYGAEDP------SIAGMVLDSAFS 170 (486)
Q Consensus 107 S~~~~~~~~~~~~~Dl~~~i~~l~~~----------~~~~~i~LvGhSmGG~lAl~~A~~~p------~v~~lVl~sp~~ 170 (486)
... ...+++..++++|+.+. .+.++++|+||||||.+++.+|..++ .++++|+++|..
T Consensus 93 ~~~------~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 93 PDG------TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred CCc------hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 211 12356777788888753 12368999999999999999998876 378999988875
Q ss_pred CHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCC-----C----CCHH
Q 011425 171 DLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDK-----F----IRAR 241 (486)
Q Consensus 171 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~-----~----vp~~ 241 (486)
..... ....|.. . ......-++.+|+|+|++..|. . .|..
T Consensus 167 g~~~~--------~~~~p~i------------------l-----~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~ 215 (313)
T PLN00021 167 GTSKG--------KQTPPPV------------------L-----TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDG 215 (313)
T ss_pred ccccc--------cCCCCcc------------------c-----ccCcccccCCCCeEEEecCCCcccccccccccCCCC
Confidence 42100 0000100 0 0011222377999999999763 2 2343
Q ss_pred -HHHHHHHHcCCCcEEEEeCC-CCCCC
Q 011425 242 -HSDLIFNAYAGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 242 -~~~~l~~~l~~~~~l~~~~g-gH~~~ 266 (486)
+..++++.++..+.+.+.++ ||+.+
T Consensus 216 ~~~~~f~~~~~~~~~~~~~~~~gH~~~ 242 (313)
T PLN00021 216 VNHAEFFNECKAPAVHFVAKDYGHMDM 242 (313)
T ss_pred CCHHHHHHhcCCCeeeeeecCCCccee
Confidence 44778888877777766665 99754
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.3e-16 Score=145.78 Aligned_cols=180 Identities=15% Similarity=0.105 Sum_probs=116.6
Q ss_pred EEEecCCCCCCCCCcEEEEeCCCCCChhhHH---HHHHHhccCCeEEEEEcCCCCCCCCCCCC-------CCCcchHHHH
Q 011425 53 SHYMPSPFPEDTPLPCVVYCHGNSGCRADAN---EAAVILLPSNITLFTLDFSGSGLSDGDYV-------SLGWHEKDDL 122 (486)
Q Consensus 53 ~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~---~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-------~~~~~~~~Dl 122 (486)
++|+|.+. .++.|+||++||++++...+. .+...+.+.||.|+++|++|++.+...+. .....+..++
T Consensus 2 ~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (212)
T TIGR01840 2 YVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESL 79 (212)
T ss_pred EEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHH
Confidence 57888753 357899999999998877664 24445555799999999999875442111 0111236788
Q ss_pred HHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH-HHHHHHHHHhhhCCchhHHHHHHH
Q 011425 123 KVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-LMLELVDVYKIRLPKFTVKMAVQY 198 (486)
Q Consensus 123 ~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~ 198 (486)
..+++++.+.+.. ++|+|+||||||.+++.++..+|+ +.+++.+++...... ......... .+......+...
T Consensus 80 ~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 156 (212)
T TIGR01840 80 HQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM---CTAATAASVCRL 156 (212)
T ss_pred HHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc---CCCCCHHHHHHH
Confidence 8999999887655 689999999999999999999998 888888776542111 000000000 000001111111
Q ss_pred HHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC
Q 011425 199 MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (486)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~ 251 (486)
.... .........|++|+||.+|.+||++.++.+.+.+.
T Consensus 157 ~~~~--------------~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 157 VRGM--------------QSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred Hhcc--------------CCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 1100 01112233457899999999999999999888764
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.5e-15 Score=142.30 Aligned_cols=201 Identities=22% Similarity=0.256 Sum_probs=155.2
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC-CCCCCCC-----
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDY----- 111 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~-G~S~~~~----- 111 (486)
+++.+...+ ..+.+++..|.+ ..+.|.||++|+..|-......+++.|+..||.|+++|+-+. |.+....
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~---~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~ 78 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAG---AGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAE 78 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCc---CCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHH
Confidence 456677667 889999999974 344499999999999989999999999999999999999763 3222111
Q ss_pred -C-----CCCc-chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHH
Q 011425 112 -V-----SLGW-HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDV 182 (486)
Q Consensus 112 -~-----~~~~-~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~ 182 (486)
. .... ....|+.++++||..+... .+|+++|+||||.+++.++...|+|++.|...|....
T Consensus 79 ~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~---------- 148 (236)
T COG0412 79 LETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIA---------- 148 (236)
T ss_pred HhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCC----------
Confidence 0 0111 2378999999999988633 6899999999999999999999999999976655321
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEe
Q 011425 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKF 259 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~ 259 (486)
+......++++|+|+++|+.|..+|......+.+.+.. ...+.+|
T Consensus 149 --------------------------------~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y 196 (236)
T COG0412 149 --------------------------------DDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY 196 (236)
T ss_pred --------------------------------CcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe
Confidence 01122457889999999999999999988888888753 4678888
Q ss_pred CC-CCCCCC-------------hHHHHHHHHHHHHHhcC
Q 011425 260 DG-DHNSSR-------------PQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 260 ~g-gH~~~~-------------p~~~~~~I~~FL~~~l~ 284 (486)
++ .|.+.. .+..++.+.+||.+.+.
T Consensus 197 ~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 197 PGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 88 586552 24667888999988764
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.8e-15 Score=150.65 Aligned_cols=232 Identities=10% Similarity=0.060 Sum_probs=145.0
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-------------HHHHH---HHhccCCeEEEEEcCCCCCCCC--
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-------------ANEAA---VILLPSNITLFTLDFSGSGLSD-- 108 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-------------~~~~~---~~L~~~Gy~Vv~~D~rG~G~S~-- 108 (486)
..+|.|..|-.. .....++||++|+++++... |..++ ..+-...|-||++|..|.|.|.
T Consensus 40 ~~~~~Y~t~G~l---n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 40 DVQMGYETYGTL---NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CceEEEEecccc---CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 356777777432 22446899999999986422 33332 2243456999999999987532
Q ss_pred -----C---------CCC--CCCcchHHHHHHHHHHHHhcCCCCcEE-EEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc
Q 011425 109 -----G---------DYV--SLGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (486)
Q Consensus 109 -----~---------~~~--~~~~~~~~Dl~~~i~~l~~~~~~~~i~-LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~ 170 (486)
+ .+. .+....+.|+.+.+..+.+..++.++. |+||||||++++.+|.++|+ |+++|++++..
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 1 100 112234677777776666777888886 99999999999999999998 99999987654
Q ss_pred CHHHH-----HHHHHHHHhhh------------CCchhHHHH--------------------------------------
Q 011425 171 DLFDL-----MLELVDVYKIR------------LPKFTVKMA-------------------------------------- 195 (486)
Q Consensus 171 ~~~~~-----~~~~~~~~~~~------------~p~~~~~~~-------------------------------------- 195 (486)
..... ........... .|.......
T Consensus 197 ~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~ 276 (389)
T PRK06765 197 QNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSF 276 (389)
T ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhH
Confidence 32111 11111100000 010000000
Q ss_pred HHHHHHHH---hh-------------hhccccc--ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---Cc
Q 011425 196 VQYMRRVI---QK-------------KAKFDIM--DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DK 254 (486)
Q Consensus 196 ~~~~~~~~---~~-------------~~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~ 254 (486)
..++.... .. ...++.. ..+....+.++++|+|+|+|+.|.++|++.++.+.+.++. ..
T Consensus 277 e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a 356 (389)
T PRK06765 277 EKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYA 356 (389)
T ss_pred HHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCe
Confidence 00100000 00 0000000 0034556778999999999999999999999999998863 57
Q ss_pred EEEEeCC--CCCCC--ChHHHHHHHHHHHHH
Q 011425 255 NIIKFDG--DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 255 ~l~~~~g--gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+++++++ ||... .++++.+.|.+||.+
T Consensus 357 ~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 357 EVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 7888873 89866 789999999999965
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-14 Score=145.46 Aligned_cols=234 Identities=18% Similarity=0.222 Sum_probs=147.9
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~ 111 (486)
..+++.+...+| .+.+.+|.|.. ...|+||++||++ ++...+..++..|+. .|+.|+.+|||......
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~--- 127 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR--- 127 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC---
Confidence 457788887777 58889999852 3469999999987 555667777777876 49999999999654321
Q ss_pred CCCCcchHHHHHHHHHHHHhc---CC--CCcEEEEEEcchHHHHHHHHhcC-------CCccEEEEcCCccCHHHHHHHH
Q 011425 112 VSLGWHEKDDLKVVVSYLRGN---KQ--TSRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLEL 179 (486)
Q Consensus 112 ~~~~~~~~~Dl~~~i~~l~~~---~~--~~~i~LvGhSmGG~lAl~~A~~~-------p~v~~lVl~sp~~~~~~~~~~~ 179 (486)
.. ..++|+.++++|+.+. ++ .++|+|+|+|+||.+++.++... +.+.++|+++|..+......
T Consensus 128 ~p---~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s-- 202 (318)
T PRK10162 128 FP---QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS-- 202 (318)
T ss_pred CC---CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh--
Confidence 11 1268899999998764 23 36899999999999999888642 24899999998776422100
Q ss_pred HHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchh-hhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcE
Q 011425 180 VDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCL-KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKN 255 (486)
Q Consensus 180 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~ 255 (486)
...+......+....+..+....+...........++. ..+...-.|++|++|+.|.+.+ ++..+++++. ..++
T Consensus 203 ~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~ 280 (318)
T PRK10162 203 RRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCE 280 (318)
T ss_pred HHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEE
Confidence 11111111112222222222222111100000000110 1121223599999999999975 5566666653 4688
Q ss_pred EEEeCC-CCCCC-------ChHHHHHHHHHHHHHhcC
Q 011425 256 IIKFDG-DHNSS-------RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 256 l~~~~g-gH~~~-------~p~~~~~~I~~FL~~~l~ 284 (486)
+++++| .|.+. ...+.++.+.+||.+.++
T Consensus 281 ~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 281 FKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred EEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999998 89754 235677888899988764
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=160.67 Aligned_cols=203 Identities=18% Similarity=0.222 Sum_probs=142.6
Q ss_pred HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcC--------------C--CCcEEEEEEcchH
Q 011425 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK--------------Q--TSRIGLWGRSMGA 147 (486)
Q Consensus 84 ~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~--------------~--~~~i~LvGhSmGG 147 (486)
.+..+|+.+||.|+.+|.||.|.|+|.+...+..+.+|+.++|+|+..+. . .++|+++|.||||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 35578999999999999999999999887766677999999999998531 1 2799999999999
Q ss_pred HHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHH-----------------HHHHhhh--CCch---hHHHHHHHHH---H
Q 011425 148 VTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL-----------------VDVYKIR--LPKF---TVKMAVQYMR---R 201 (486)
Q Consensus 148 ~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~-----------------~~~~~~~--~p~~---~~~~~~~~~~---~ 201 (486)
++++.+|+..|. ++++|..++..+..+..... ......+ .+.. .......... .
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 429 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTA 429 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhh
Confidence 999999888765 99999999888765533220 0000000 0000 0000000000 0
Q ss_pred HHhhh-hcc--cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCCCCCCC---ChHHHH
Q 011425 202 VIQKK-AKF--DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGDHNSS---RPQFYY 272 (486)
Q Consensus 202 ~~~~~-~~~--~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~ggH~~~---~p~~~~ 272 (486)
..... ..+ .+...+....+.++++|+|+|||..|..+++.++.++++++. ..+++++.+++|... .+..+.
T Consensus 430 ~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H~~~~~~~~~d~~ 509 (767)
T PRK05371 430 AQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQGGHVYPNNWQSIDFR 509 (767)
T ss_pred hhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCccCCCchhHHHHH
Confidence 00000 000 112235566778899999999999999999999988888874 367788888899754 346788
Q ss_pred HHHHHHHHHhcCCC
Q 011425 273 DSVSIFFYNVLHPP 286 (486)
Q Consensus 273 ~~I~~FL~~~l~~~ 286 (486)
+.+.+||+.+|.+.
T Consensus 510 e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 510 DTMNAWFTHKLLGI 523 (767)
T ss_pred HHHHHHHHhccccC
Confidence 99999999998764
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=140.99 Aligned_cols=219 Identities=19% Similarity=0.208 Sum_probs=142.3
Q ss_pred CCCCcEEEEeCCCCCChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 011425 63 DTPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
-...|++|++||+.|+...|..+...|+.. +..|+++|.|.||.|+..........++|+...|+.........++.++
T Consensus 49 ~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~ 128 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLL 128 (315)
T ss_pred cCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceec
Confidence 357899999999999999999999998875 7899999999999998544333212267788888877655456899999
Q ss_pred EEcchH-HHHHHHHhcCCC-c-cEEEEcCCccC---HHHHHHHHHHHHhhhC------Cc--hhHH---------HHHHH
Q 011425 142 GRSMGA-VTSLLYGAEDPS-I-AGMVLDSAFSD---LFDLMLELVDVYKIRL------PK--FTVK---------MAVQY 198 (486)
Q Consensus 142 GhSmGG-~lAl~~A~~~p~-v-~~lVl~sp~~~---~~~~~~~~~~~~~~~~------p~--~~~~---------~~~~~ 198 (486)
|||||| .+++..+...|. + +.+|...++.. .......+........ +. ...+ ...++
T Consensus 129 GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~f 208 (315)
T KOG2382|consen 129 GHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQF 208 (315)
T ss_pred ccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHH
Confidence 999999 777888888887 4 44555433311 1111111111111000 10 0001 11111
Q ss_pred HHHHHhh--hhc-ccc-c-------------ccchhhhC--CCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEe
Q 011425 199 MRRVIQK--KAK-FDI-M-------------DLNCLKLA--PKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKF 259 (486)
Q Consensus 199 ~~~~~~~--~~~-~~~-~-------------~~~~~~~l--~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~ 259 (486)
+...+.. ... +.+ . ..+....+ .....|||+++|.++.+++.++-..+...++. .+++.+
T Consensus 209 i~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-~e~~~l 287 (315)
T KOG2382|consen 209 ILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-VEVHEL 287 (315)
T ss_pred HHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccc-hheeec
Confidence 1111110 000 000 0 00111112 44678999999999999999988888887755 788888
Q ss_pred C-CCCCCC--ChHHHHHHHHHHHHHh
Q 011425 260 D-GDHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 260 ~-ggH~~~--~p~~~~~~I~~FL~~~ 282 (486)
+ +||+.. .|+++.+.|.+|+.++
T Consensus 288 d~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 288 DEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred ccCCceeecCCHHHHHHHHHHHhccc
Confidence 8 699976 8999999999998765
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=153.15 Aligned_cols=214 Identities=14% Similarity=0.067 Sum_probs=137.2
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-----HHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-----~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~ 123 (486)
.+....|.|.. +....++||++||+......+ ..++.+|+++||.|+++|++|+|.+........ +..+++.
T Consensus 173 ~~eLi~Y~P~t--~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~dd-Y~~~~i~ 249 (532)
T TIGR01838 173 LFQLIQYEPTT--ETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDD-YIRDGVI 249 (532)
T ss_pred cEEEEEeCCCC--CcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhh-hHHHHHH
Confidence 35555777753 223578999999997665544 368999999999999999999998865432222 2246688
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHH----HHHhcC-CC-ccEEEEcCCccCHHH--------------HHHHHHHHH
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSL----LYGAED-PS-IAGMVLDSAFSDLFD--------------LMLELVDVY 183 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl----~~A~~~-p~-v~~lVl~sp~~~~~~--------------~~~~~~~~~ 183 (486)
++++++++..+..+++++||||||.++. .+++.. ++ |++++++++..++.. .+.......
T Consensus 250 ~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~ 329 (532)
T TIGR01838 250 AALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGG 329 (532)
T ss_pred HHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhc
Confidence 9999998887889999999999999852 245554 55 999999887654321 011111110
Q ss_pred hhhCCch--------------------------------------------hHHHHHHHHHHHHhhhhcc--cccccchh
Q 011425 184 KIRLPKF--------------------------------------------TVKMAVQYMRRVIQKKAKF--DIMDLNCL 217 (486)
Q Consensus 184 ~~~~p~~--------------------------------------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 217 (486)
..+|.. +.....++++.++...... .+...+..
T Consensus 330 -G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~ 408 (532)
T TIGR01838 330 -GYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVR 408 (532)
T ss_pred -CCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEe
Confidence 011111 1111122222222211110 00011233
Q ss_pred hhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC
Q 011425 218 KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS 266 (486)
Q Consensus 218 ~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~ 266 (486)
..+.+|++|+|+|+|.+|.++|++.+..+.+.+++...+++.++||...
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAG 457 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchH
Confidence 4677899999999999999999999999999988655444444599844
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.3e-15 Score=141.12 Aligned_cols=182 Identities=19% Similarity=0.234 Sum_probs=117.8
Q ss_pred eEEEEEcCCCCCCCCCC-CCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 94 ITLFTLDFSGSGLSDGD-YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 94 y~Vv~~D~rG~G~S~~~-~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
|.|+++|+||+|.|+.. .........+|+.+.++.+++..+.++++++||||||.+++.+|+.+|+ |+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 78999999999999841 1122223378899999999888888889999999999999999999999 999999998610
Q ss_pred ----H-HHHHH-----HH-HHHHhh----hCC----chh--HHHH---------HHHHHHHHhh---------h---hcc
Q 011425 172 ----L-FDLML-----EL-VDVYKI----RLP----KFT--VKMA---------VQYMRRVIQK---------K---AKF 209 (486)
Q Consensus 172 ----~-~~~~~-----~~-~~~~~~----~~p----~~~--~~~~---------~~~~~~~~~~---------~---~~~ 209 (486)
. ..... .. ...... ... ... .... .......... . ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALG 160 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccccc
Confidence 0 00000 00 000000 000 000 0000 0000000000 0 000
Q ss_pred cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHH
Q 011425 210 DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVS 276 (486)
Q Consensus 210 ~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~ 276 (486)
.....+....+.++++|+|+++|++|.++|+..+..+.+.++. .+++++++ ||+.. .++++.+.|.
T Consensus 161 ~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 161 YFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 1111234456778999999999999999999999998888765 67888888 99966 6777776664
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.9e-14 Score=160.09 Aligned_cols=231 Identities=14% Similarity=0.125 Sum_probs=137.8
Q ss_pred EEEEEEEecCCCCC--CCCCcEEEEeCCCCCChhhHHHH-----HHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHH
Q 011425 49 VLQCSHYMPSPFPE--DTPLPCVVYCHGNSGCRADANEA-----AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD 121 (486)
Q Consensus 49 ~L~~~~~~P~~~~~--~~~~p~VV~lHG~gg~~~~~~~~-----~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~D 121 (486)
.+..+.|.|..... ....++|||+||++.....|... +..|.++||.|+++|+ |.++.......+...++
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~ 124 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADH 124 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHH
Confidence 34555777753211 23568999999999988888653 7889899999999995 55543211111111233
Q ss_pred H---HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCHH-----HHHH------------HH
Q 011425 122 L---KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDLF-----DLML------------EL 179 (486)
Q Consensus 122 l---~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~~-----~~~~------------~~ 179 (486)
+ .++++.++.. ..++++++||||||.+++.+++.+ ++ |+++|+++++.++. .... .+
T Consensus 125 i~~l~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (994)
T PRK07868 125 VVALSEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHV 203 (994)
T ss_pred HHHHHHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhh
Confidence 3 4444444433 246899999999999999998755 43 99999866653321 0000 00
Q ss_pred HHHHhhhCCchh-------------HHHHH-------------------HHH-------------HHHHhhhhccccc--
Q 011425 180 VDVYKIRLPKFT-------------VKMAV-------------------QYM-------------RRVIQKKAKFDIM-- 212 (486)
Q Consensus 180 ~~~~~~~~p~~~-------------~~~~~-------------------~~~-------------~~~~~~~~~~~~~-- 212 (486)
... ...|... ..... .+. ..++.........
T Consensus 204 ~~~--~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~ 281 (994)
T PRK07868 204 FNR--LDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMT 281 (994)
T ss_pred hhc--CCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccC
Confidence 000 0011100 00000 000 0000000000000
Q ss_pred -ccch---hhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcE-EEEeCCCCCCC-----ChHHHHHHHHHHHHHh
Q 011425 213 -DLNC---LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKN-IIKFDGDHNSS-----RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 213 -~~~~---~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~-l~~~~ggH~~~-----~p~~~~~~I~~FL~~~ 282 (486)
.... ...+.+|++|+|+|+|++|.++|++.+..+.+.++.... .++.++||+.+ .+++++..|.+||.++
T Consensus 282 g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 282 GGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred ceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 0000 124678999999999999999999999999998865433 23345599855 5789999999999987
Q ss_pred cCC
Q 011425 283 LHP 285 (486)
Q Consensus 283 l~~ 285 (486)
-..
T Consensus 362 ~~~ 364 (994)
T PRK07868 362 EGD 364 (994)
T ss_pred ccC
Confidence 654
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.3e-13 Score=123.54 Aligned_cols=223 Identities=17% Similarity=0.210 Sum_probs=133.0
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC-CCCCCCCCCCCc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSLGW 116 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~-G~S~~~~~~~~~ 116 (486)
.+..+...+|..|..|.-.|... .....++||+..|++.....|..++.+|+..||+|+.+|...| |.|+|....+..
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm 81 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNN-EPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM 81 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TT-S---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------H
T ss_pred ccceeEcCCCCEEEEeccCCCCC-CcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcch
Confidence 45567778999999999988742 3345699999999999999999999999999999999999877 999999887776
Q ss_pred ch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHH--
Q 011425 117 HE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVK-- 193 (486)
Q Consensus 117 ~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~-- 193 (486)
.. ..++..+++|++.. +..+++|+.-|+.|-+|+..|++- ++.-+|+.-+..++...+......-....|.-..+
T Consensus 82 s~g~~sL~~V~dwl~~~-g~~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~d 159 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATR-GIRRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPED 159 (294)
T ss_dssp HHHHHHHHHHHHHHHHT-T---EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SE
T ss_pred HHhHHHHHHHHHHHHhc-CCCcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCc
Confidence 44 78999999999965 678999999999999999999854 68889988888888776655443222222211110
Q ss_pred --------HHHHHHHHHHhhhhccccccc-chhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-CCcEEEEeCC-C
Q 011425 194 --------MAVQYMRRVIQKKAKFDIMDL-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-D 262 (486)
Q Consensus 194 --------~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~l~~~~g-g 262 (486)
....+....+... +.+. +....+.++++|++.+++.+|..|......++...+. +.++++.++| .
T Consensus 160 ldfeGh~l~~~vFv~dc~e~~----w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~ 235 (294)
T PF02273_consen 160 LDFEGHNLGAEVFVTDCFEHG----WDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSS 235 (294)
T ss_dssp EEETTEEEEHHHHHHHHHHTT-----SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-S
T ss_pred ccccccccchHHHHHHHHHcC----CccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCcc
Confidence 0112333333221 1111 3346677889999999999999999999999888765 4567788888 9
Q ss_pred CCCCC
Q 011425 263 HNSSR 267 (486)
Q Consensus 263 H~~~~ 267 (486)
|..-+
T Consensus 236 HdL~e 240 (294)
T PF02273_consen 236 HDLGE 240 (294)
T ss_dssp S-TTS
T ss_pred chhhh
Confidence 98763
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-13 Score=129.05 Aligned_cols=181 Identities=19% Similarity=0.166 Sum_probs=109.4
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHH-HhccCCeEEEEEcCCC------CCC---CCCCC---CCCCcch-------HHH
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAV-ILLPSNITLFTLDFSG------SGL---SDGDY---VSLGWHE-------KDD 121 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~-~L~~~Gy~Vv~~D~rG------~G~---S~~~~---~~~~~~~-------~~D 121 (486)
.+...++|||+||+|++...+..... .+...+..++.+.-|. .|. +-.+. ....... .+.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 45678999999999999876666555 3344467888776652 222 11000 0001011 223
Q ss_pred HHHHHHHHHhc-CCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHH
Q 011425 122 LKVVVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYM 199 (486)
Q Consensus 122 l~~~i~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 199 (486)
+.++|+...+. .+..+|+|+|+|+||++++.++..+|. +.++|+++++...... .
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--------------~--------- 146 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--------------L--------- 146 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC--------------C---------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc--------------c---------
Confidence 44444433332 233799999999999999999999998 9999999987531000 0
Q ss_pred HHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCCChHHHHHHH
Q 011425 200 RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSV 275 (486)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~p~~~~~~I 275 (486)
. ...... -.+|++++||..|+++|.+.++...+.+. .+.++..|++ ||... .+..+.+
T Consensus 147 ----------~----~~~~~~--~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~--~~~~~~~ 208 (216)
T PF02230_consen 147 ----------E----DRPEAL--AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS--PEELRDL 208 (216)
T ss_dssp ----------H----CCHCCC--CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----HHHHHHH
T ss_pred ----------c----cccccc--CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC--HHHHHHH
Confidence 0 000111 16899999999999999998888888765 3578899995 99875 6777889
Q ss_pred HHHHHHhc
Q 011425 276 SIFFYNVL 283 (486)
Q Consensus 276 ~~FL~~~l 283 (486)
.+||.+++
T Consensus 209 ~~~l~~~~ 216 (216)
T PF02230_consen 209 REFLEKHI 216 (216)
T ss_dssp HHHHHHH-
T ss_pred HHHHhhhC
Confidence 99998764
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.1e-14 Score=131.47 Aligned_cols=127 Identities=24% Similarity=0.320 Sum_probs=93.5
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCCCC-CC
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYV-SL 114 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~-~~ 114 (486)
++++.+...++ ++..++-.|. ....|+++++||+|.+.-.|..++..+..+ ...|+++|+||||++.-... ..
T Consensus 50 kedv~i~~~~~-t~n~Y~t~~~----~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dl 124 (343)
T KOG2564|consen 50 KEDVSIDGSDL-TFNVYLTLPS----ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDL 124 (343)
T ss_pred ccccccCCCcc-eEEEEEecCC----CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhc
Confidence 35566655554 5666565553 357899999999999999999999887664 67889999999999974322 22
Q ss_pred Ccch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc--CCCccEEEEcCCc
Q 011425 115 GWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE--DPSIAGMVLDSAF 169 (486)
Q Consensus 115 ~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~--~p~v~~lVl~sp~ 169 (486)
.... ..|+.+++.++-.. ...+|+|+||||||.+|.+.|.. -|.+.|++.+.-.
T Consensus 125 S~eT~~KD~~~~i~~~fge-~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 125 SLETMSKDFGAVIKELFGE-LPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVV 181 (343)
T ss_pred CHHHHHHHHHHHHHHHhcc-CCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEe
Confidence 2222 67888888777533 23689999999999999887765 4568888876644
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-12 Score=123.10 Aligned_cols=212 Identities=19% Similarity=0.278 Sum_probs=137.1
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~ 115 (486)
.+..+.+...+|..+.....+-...+.+.+..+||-+||-.|+..+|..+...|.+.|++++.++|||+|.+++.+...
T Consensus 5 ~~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~- 83 (297)
T PF06342_consen 5 VRKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQ- 83 (297)
T ss_pred EEEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccc-
Confidence 3456677777777665554443333344566799999999999999999999999999999999999999998754322
Q ss_pred cchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccC-------HHHHHHHHHHHHhhhC
Q 011425 116 WHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD-------LFDLMLELVDVYKIRL 187 (486)
Q Consensus 116 ~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~-------~~~~~~~~~~~~~~~~ 187 (486)
+ .-.+-...+..+.+..++ ++++++|||.||-.|+.+|..+| ..|+++++|+.- +...+..+ ......+
T Consensus 84 ~-~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~G~r~HkgIrp~~r~~~i-~~l~~~l 160 (297)
T PF06342_consen 84 Y-TNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP-LHGLVLINPPGLRPHKGIRPLSRMETI-NYLYDLL 160 (297)
T ss_pred c-ChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc-cceEEEecCCccccccCcCHHHHHHHH-HHHHHHh
Confidence 1 124444555555555566 78999999999999999999997 679999887642 11111111 1111123
Q ss_pred CchhHHHHHHHHHHHHhhh--------------hccccc-ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC
Q 011425 188 PKFTVKMAVQYMRRVIQKK--------------AKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (486)
Q Consensus 188 p~~~~~~~~~~~~~~~~~~--------------~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~ 251 (486)
|.+....+...+-+++.-+ ...++. ....++.+.+-++|+|+++|.+|.+|--+.+.+++..+.
T Consensus 161 p~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 161 PRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred hHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 3332222221111111100 001110 112345566667999999999999998888777776653
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-12 Score=122.36 Aligned_cols=207 Identities=14% Similarity=0.123 Sum_probs=132.8
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcC----CCCcEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK----QTSRIG 139 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~----~~~~i~ 139 (486)
...+.++++|=.||++..|..+...|.. .+.++++.+||+|..-+.+.. .|+.++++.+.... ...++.
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~------~di~~Lad~la~el~~~~~d~P~a 77 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPLL------TDIESLADELANELLPPLLDAPFA 77 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCccc------ccHHHHHHHHHHHhccccCCCCee
Confidence 5677889999999999999999887766 599999999999977554432 33444444333322 236899
Q ss_pred EEEEcchHHHHHHHHhcCCC----ccEEEEcCCccC------------HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHH
Q 011425 140 LWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFSD------------LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVI 203 (486)
Q Consensus 140 LvGhSmGG~lAl~~A~~~p~----v~~lVl~sp~~~------------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 203 (486)
++||||||++|..+|.+..+ +.++++.+.... -.+.+..+....+.....+....+..++-.++
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPil 157 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPIL 157 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHH
Confidence 99999999999999977432 666666543221 01223333332221111111122233332222
Q ss_pred hhhhccccc-ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHH
Q 011425 204 QKKAKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 204 ~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~ 280 (486)
... +... .+.. ..-..+.||+.++.|++|..|..+......+..++..++.+++|||++. ..+++...|.+.+.
T Consensus 158 RAD--~~~~e~Y~~-~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 158 RAD--FRALESYRY-PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHH--HHHhccccc-CCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhh
Confidence 221 1100 0011 1124688999999999999999999999999998899999999999987 34555555555554
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.5e-13 Score=147.82 Aligned_cols=224 Identities=20% Similarity=0.262 Sum_probs=161.7
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-----HHHHHHHhccCCeEEEEEcCCCCCCCCCCC-----CCCC
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----ANEAAVILLPSNITLFTLDFSGSGLSDGDY-----VSLG 115 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-----~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~-----~~~~ 115 (486)
+|..+.+.+.+|++.....+.|+||.+||+.++... .......+...|+.|+.+|.||.|...... ...+
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 999999999999988888899999999999873221 111222466779999999999998776442 3345
Q ss_pred cchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC--ccEEEEcCCccCHHHHHHHHHHHHhhhCCchh
Q 011425 116 WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (486)
Q Consensus 116 ~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~--v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~ 191 (486)
..+++|...++.++.+..-+ .+|.|+|+|+||++++.++...+. ++|.|.++|..++. .............|...
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~terymg~p~~~ 664 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTERYMGLPSEN 664 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHhhcCCCccc
Confidence 45689999999999887643 799999999999999999999984 88889999998754 11111100000111111
Q ss_pred HHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCE-EEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCC
Q 011425 192 VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPA-LFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS 266 (486)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-Lii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~ 266 (486)
... .........+..++.|. |++||+.|..|+.+++..+++++. -...+.++++ +|...
T Consensus 665 ~~~----------------y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 665 DKG----------------YEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred cch----------------hhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccc
Confidence 100 11113334455566666 999999999999999999998875 2467888888 99977
Q ss_pred Ch---HHHHHHHHHHHHHhcCCC
Q 011425 267 RP---QFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 267 ~p---~~~~~~I~~FL~~~l~~~ 286 (486)
.. ..+...+..||..++..+
T Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 729 YVEVISHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred cccchHHHHHHHHHHHHHHcCcc
Confidence 32 578889999999776543
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.1e-13 Score=138.21 Aligned_cols=230 Identities=18% Similarity=0.197 Sum_probs=158.2
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh---H--HH--HHHHhccCCeEEEEEcCCCCCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD---A--NE--AAVILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~---~--~~--~~~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
+-+.|....|..+++.+|.|.....+++.|+|+++-|+.+-... | .. -...|+..||.|+++|-||.-...-.
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 55778888999999999999988888889999999999764221 1 11 23568889999999999997554422
Q ss_pred -----CCCCCcchHHHHHHHHHHHHhcCCC---CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHH
Q 011425 111 -----YVSLGWHEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD 181 (486)
Q Consensus 111 -----~~~~~~~~~~Dl~~~i~~l~~~~~~---~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~ 181 (486)
...++.-+++|-.+.+++|.++.+. ++|+|-|+|+||++++..+.++|+ +++.|..+|..+....-.....
T Consensus 694 FE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTE 773 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTE 773 (867)
T ss_pred hHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchh
Confidence 2234445589999999999998754 899999999999999999999999 6888877777653211111111
Q ss_pred HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEE
Q 011425 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIK 258 (486)
Q Consensus 182 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~ 258 (486)
.+. ..|.... ..+....+ ......++.-.-.+|++||--|..|...+...+...+- +..++.+
T Consensus 774 RYM-g~P~~nE---~gY~agSV----------~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~I 839 (867)
T KOG2281|consen 774 RYM-GYPDNNE---HGYGAGSV----------AGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQI 839 (867)
T ss_pred hhc-CCCccch---hcccchhH----------HHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEE
Confidence 111 1110000 00000000 01123344444569999999999999998888877653 5678999
Q ss_pred eCC-CCCCCCh---HHHHHHHHHHHHH
Q 011425 259 FDG-DHNSSRP---QFYYDSVSIFFYN 281 (486)
Q Consensus 259 ~~g-gH~~~~p---~~~~~~I~~FL~~ 281 (486)
||. -|..-.+ ..+-..+..|+++
T Consensus 840 fP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 840 FPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccccCCCccchhHHHHHHHHHhh
Confidence 998 8886533 3455667788765
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-13 Score=137.50 Aligned_cols=205 Identities=19% Similarity=0.252 Sum_probs=117.2
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH------------------HHHHHHhccCCe
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA------------------NEAAVILLPSNI 94 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~------------------~~~~~~L~~~Gy 94 (486)
-.|+.+.+.|...++..+.+++.+|.+. .++.|.||++||-++..+.. ..++..|+++||
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 3478899999999999999999999853 57889999999998764321 235788999999
Q ss_pred EEEEEcCCCCCCCCCCCCC-C----------------Ccc----hHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHH
Q 011425 95 TLFTLDFSGSGLSDGDYVS-L----------------GWH----EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSL 151 (486)
Q Consensus 95 ~Vv~~D~rG~G~S~~~~~~-~----------------~~~----~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl 151 (486)
.|+++|.+|+|+....... . ++. ..-|...+++||.++..+ ++|+++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 9999999999987532110 0 000 123455689999988766 7999999999999999
Q ss_pred HHHhcCCCccEEEEcCCccCHHHHHHHHH--H---------HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhC
Q 011425 152 LYGAEDPSIAGMVLDSAFSDLFDLMLELV--D---------VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLA 220 (486)
Q Consensus 152 ~~A~~~p~v~~lVl~sp~~~~~~~~~~~~--~---------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (486)
.+|+..++|++.|..+-.....+....+. . .+....|++. ..+ +....+
T Consensus 242 ~LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~---------------r~~-----D~PdIa 301 (390)
T PF12715_consen 242 WLAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLW---------------RYF-----DFPDIA 301 (390)
T ss_dssp HHHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCC---------------CC-------HHHHH
T ss_pred HHHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHH---------------hhC-----ccHHHH
Confidence 99999999999888765544332211110 0 0000111110 000 111111
Q ss_pred C-CCCCCEEEEEeCCCCCCCHHHHHHHHHHcC--CCcEEEEeCC
Q 011425 221 P-KTFIPALFGHASEDKFIRARHSDLIFNAYA--GDKNIIKFDG 261 (486)
Q Consensus 221 ~-~i~~PvLii~G~~D~~vp~~~~~~l~~~l~--~~~~l~~~~g 261 (486)
. -...|+|++.|..|..+|. ++..++... .+.+++.++.
T Consensus 302 sliAPRPll~~nG~~Dklf~i--V~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 302 SLIAPRPLLFENGGKDKLFPI--VRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp HTTTTS-EEESS-B-HHHHHH--HHHHHHHTT-GGGEEE---GG
T ss_pred HHhCCCcchhhcCCcccccHH--HHHHHHhcCCCcceEEeeccc
Confidence 1 1235999999999998765 667777665 3556666664
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.3e-12 Score=119.28 Aligned_cols=209 Identities=19% Similarity=0.246 Sum_probs=121.5
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccC--CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~--Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
.|.||++||++++...|......+... .|.++++|+||||.|. .. . .........+..+.+..+..+++++||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~-~~~~~~~~~~~~~~~~~~~~~~~l~G~ 95 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---G-YSLSAYADDLAALLDALGLEKVVLVGH 95 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---c-ccHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 559999999999988887733333332 1999999999999997 11 1 111222333333333446667999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCccC-----------HH-HHHHHHHHHH------------hhh--CCchh-----
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----------LF-DLMLELVDVY------------KIR--LPKFT----- 191 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~~-----------~~-~~~~~~~~~~------------~~~--~p~~~----- 191 (486)
||||.+++.++..+|+ ++++|++++... .. .......... ... .....
T Consensus 96 S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (282)
T COG0596 96 SMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARA 175 (282)
T ss_pred cccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchh
Confidence 9999999999999998 999999886543 00 0000000000 000 00000
Q ss_pred --HH----HHHHHHHHHHhhhh--ccccc-----ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEE
Q 011425 192 --VK----MAVQYMRRVIQKKA--KFDIM-----DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIK 258 (486)
Q Consensus 192 --~~----~~~~~~~~~~~~~~--~~~~~-----~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~ 258 (486)
.. .............. ..... ..........+.+|+++++|..|.+.+......+.+.++....+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~ 255 (282)
T COG0596 176 GLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVV 255 (282)
T ss_pred ccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEE
Confidence 00 00000000000000 00000 0012234566789999999999977777665555555544356777
Q ss_pred eCC-CCCCC--ChHHHHHHHHHHH
Q 011425 259 FDG-DHNSS--RPQFYYDSVSIFF 279 (486)
Q Consensus 259 ~~g-gH~~~--~p~~~~~~I~~FL 279 (486)
+++ ||... .|+.+.+.+.+|+
T Consensus 256 ~~~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 256 IPGAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred eCCCCCcchhhcHHHHHHHHHHHH
Confidence 776 99977 6777877777744
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=5e-13 Score=122.63 Aligned_cols=234 Identities=17% Similarity=0.204 Sum_probs=146.9
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCc-EEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC---CC
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLP-CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS---LG 115 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p-~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~---~~ 115 (486)
+.+...||..+.+.+| |. .++.+ .|++-.+.+.....|++++..++..||.|+.+||||.|.|...... ..
T Consensus 8 ~~l~~~DG~~l~~~~~-pA----~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~ 82 (281)
T COG4757 8 AHLPAPDGYSLPGQRF-PA----DGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR 82 (281)
T ss_pred cccccCCCccCccccc-cC----CCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccc
Confidence 5677889999999988 32 23334 5555556666666778899999999999999999999999744322 22
Q ss_pred cch--HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHH---------------
Q 011425 116 WHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLE--------------- 178 (486)
Q Consensus 116 ~~~--~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~--------------- 178 (486)
+.+ ..|+.++++++++..+.-+..++||||||.+.-.+.. ++.+.+....+........+..
T Consensus 83 ~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 83 YLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-CcccceeeEeccccccccchhhhhcccceeecccccc
Confidence 222 5789999999999877789999999999997765543 3343222222111111110000
Q ss_pred HHHHHhhhCCc--------hhHHHHHHHHHHHHhhhhccccc-ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHH
Q 011425 179 LVDVYKIRLPK--------FTVKMAVQYMRRVIQKKAKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249 (486)
Q Consensus 179 ~~~~~~~~~p~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 249 (486)
.+..+...+|. .+...+.++.+.....+..++.. ..+..+....+.+|++++...+|+.+|+...+.+.+.
T Consensus 162 ~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~ 241 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASF 241 (281)
T ss_pred chhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHh
Confidence 01111111111 12223333333332222222211 1124455677899999999999999999999999888
Q ss_pred cCC-CcEEEEeC---C--CCCCC--Ch-HHHHHHHHHHH
Q 011425 250 YAG-DKNIIKFD---G--DHNSS--RP-QFYYDSVSIFF 279 (486)
Q Consensus 250 l~~-~~~l~~~~---g--gH~~~--~p-~~~~~~I~~FL 279 (486)
..+ ..+.+.++ + ||+.. ++ |.+++.+++|+
T Consensus 242 y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 242 YRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 764 33344332 3 89866 34 77888888776
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-12 Score=120.52 Aligned_cols=177 Identities=24% Similarity=0.274 Sum_probs=123.9
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC--CCC-------CCCCCCCCc-chHHHHHHHHHHHHh
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS--GLS-------DGDYVSLGW-HEKDDLKVVVSYLRG 131 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~--G~S-------~~~~~~~~~-~~~~Dl~~~i~~l~~ 131 (486)
+++..|+||++||+|++..++.++...+..+ +.++.+.-+-- |.- .+.+..... .....+.+.++.+.+
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 4567789999999999999998877777664 55554432211 100 011110000 113445556666666
Q ss_pred cCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhc
Q 011425 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK 208 (486)
Q Consensus 132 ~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 208 (486)
.++. ++++++|+|.||++++.+...+|. ++++|+.+|...+...
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 6666 899999999999999999999998 8999998887642110
Q ss_pred ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCCCCCCCChHHHHHHHHHHHHHhc
Q 011425 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 209 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~ggH~~~~p~~~~~~I~~FL~~~l 283 (486)
..-..-.+|++++||..|++||...+.++.+.+. ..++...+++||... .+..+.+.+|+.+.+
T Consensus 140 ---------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~--~e~~~~~~~wl~~~~ 206 (207)
T COG0400 140 ---------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIP--PEELEAARSWLANTL 206 (207)
T ss_pred ---------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCC--HHHHHHHHHHHHhcc
Confidence 0111234799999999999999998888777654 578888999999875 566778888988754
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1e-12 Score=136.99 Aligned_cols=135 Identities=19% Similarity=0.245 Sum_probs=112.0
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeC--CCCCC---hhhHHHHHH---HhccCCeEEEEEcCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCH--GNSGC---RADANEAAV---ILLPSNITLFTLDFSGSGL 106 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lH--G~gg~---~~~~~~~~~---~L~~~Gy~Vv~~D~rG~G~ 106 (486)
|...++.++..||++|...+|+|. ..++.|+++..+ .+... ......... .++.+||.||..|.||.|.
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa---~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~ 93 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPA---GAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccC---CCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccccc
Confidence 666889999999999999999998 347899999999 55432 111222333 6888999999999999999
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH
Q 011425 107 SDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (486)
Q Consensus 107 S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~ 172 (486)
|+|.+.....++++|..++|+|+.++... ++|+++|.|++|+.++.+|+..|. +++++..++..+.
T Consensus 94 SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 94 SEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred CCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 99998777655789999999999998655 899999999999999999998776 9999988777664
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.2e-12 Score=131.88 Aligned_cols=208 Identities=11% Similarity=0.039 Sum_probs=136.3
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-----HHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-----~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~ 123 (486)
+....|.|.. +.....+||+++++-.-...+ ..++++|.++||.|+++|+++-+..... .++.+ ++.+.
T Consensus 201 ~eLiqY~P~t--e~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~---~~ldDYv~~i~ 275 (560)
T TIGR01839 201 LELIQYKPIT--EQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE---WGLSTYVDALK 275 (560)
T ss_pred eEEEEeCCCC--CCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC---CCHHHHHHHHH
Confidence 4445677753 334568899999987432222 4588999999999999999987665432 22222 56888
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHH----HHhcCCC--ccEEEEcCCccCHHH-----------HH---HHHHHHH
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLL----YGAEDPS--IAGMVLDSAFSDLFD-----------LM---LELVDVY 183 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~----~A~~~p~--v~~lVl~sp~~~~~~-----------~~---~~~~~~~ 183 (486)
++|+.+++..+..+|.++||||||.+++. +++.+++ |+.++++.++.++.. .+ ......
T Consensus 276 ~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~- 354 (560)
T TIGR01839 276 EAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQ- 354 (560)
T ss_pred HHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHh-
Confidence 99999998877899999999999999986 7777773 999998777654321 00 000000
Q ss_pred hhhCCchhH--------------------------------------------HHHHHHHHHHHhhhhcccccc---cch
Q 011425 184 KIRLPKFTV--------------------------------------------KMAVQYMRRVIQKKAKFDIMD---LNC 216 (486)
Q Consensus 184 ~~~~p~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~---~~~ 216 (486)
...+|.... ....+++ .++..+....... ...
T Consensus 355 ~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l-~ly~~N~L~~pG~l~v~G~ 433 (560)
T TIGR01839 355 AGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLL-DMFKSNPLTRPDALEVCGT 433 (560)
T ss_pred cCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHH-HHHhcCCCCCCCCEEECCE
Confidence 011111111 0111111 0111000000000 011
Q ss_pred hhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCC
Q 011425 217 LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHN 264 (486)
Q Consensus 217 ~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~ 264 (486)
.-.+.+|++|+|++.|..|.++|++.+..+.+.++.+++++..++||.
T Consensus 434 ~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHI 481 (560)
T TIGR01839 434 PIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHI 481 (560)
T ss_pred EechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCcc
Confidence 234677999999999999999999999999999988889999999997
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-11 Score=113.92 Aligned_cols=181 Identities=14% Similarity=0.179 Sum_probs=112.6
Q ss_pred EEEeCCCCCChhhHH--HHHHHhccCC--eEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 69 VVYCHGNSGCRADAN--EAAVILLPSN--ITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 69 VV~lHG~gg~~~~~~--~~~~~L~~~G--y~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
||++||+.++..... .+.+.+.+.+ ..+.++|++.+ ...+.+.++.+.+....+.++|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------------p~~a~~~l~~~i~~~~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------------PEEAIAQLEQLIEELKPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------------HHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 799999998876553 3445566554 56677776511 13333333333333344569999999
Q ss_pred chHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCC
Q 011425 145 MGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF 224 (486)
Q Consensus 145 mGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 224 (486)
|||+.|..+|.+++ +++ |+++|...+...+.............-........ +.....+.. ....-.
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~----~~~l~~l~~-------~~~~~~ 134 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEH----IEELKALEV-------PYPTNP 134 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHh----hhhcceEec-------cccCCC
Confidence 99999999998886 555 88899998877766554432111111000000000 000000000 012234
Q ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCCChHHHHHHHHHHH
Q 011425 225 IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFF 279 (486)
Q Consensus 225 ~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~~p~~~~~~I~~FL 279 (486)
.++++++++.|++++++.+...+ .+.+.++..+|+|.+..-+++...|.+|+
T Consensus 135 ~~~lvll~~~DEvLd~~~a~~~~---~~~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 135 ERYLVLLQTGDEVLDYREAVAKY---RGCAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred ccEEEEEecCCcccCHHHHHHHh---cCceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 68999999999999997665554 34566777677999888888899999987
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.4e-11 Score=120.15 Aligned_cols=230 Identities=18% Similarity=0.195 Sum_probs=142.6
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC-----hhhHHHHHHHhc-cCCeEEEEEcCCCCCCCCCCCCCCCcch
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC-----RADANEAAVILL-PSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~-----~~~~~~~~~~L~-~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~ 118 (486)
.....|..++|+|.........|+|||+||+|-. ...+..+...++ ..+..|+.+||| ..+..+.+..+
T Consensus 69 ~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYR---LAPEh~~Pa~y-- 143 (336)
T KOG1515|consen 69 DPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYR---LAPEHPFPAAY-- 143 (336)
T ss_pred cCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcc---cCCCCCCCccc--
Confidence 4555677789999876554688999999999842 445666666664 458999999999 56555555554
Q ss_pred HHHHHHHHHHHHhc------CCCCcEEEEEEcchHHHHHHHHhcC-------CCccEEEEcCCccCHHHHHHHHHHHHhh
Q 011425 119 KDDLKVVVSYLRGN------KQTSRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLELVDVYKI 185 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~------~~~~~i~LvGhSmGG~lAl~~A~~~-------p~v~~lVl~sp~~~~~~~~~~~~~~~~~ 185 (486)
+|...++.|+.++ .+.++|+|+|-|.||.+|..+|.+. +.|++.|++.|+....+....-......
T Consensus 144 -~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~ 222 (336)
T KOG1515|consen 144 -DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLN 222 (336)
T ss_pred -hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhc
Confidence 7777777777664 3448999999999999998877542 3399999999987654322221111111
Q ss_pred hCCchhHHHHHHHHHHHHhhhh-cccccccchhh-----hCCCCCC-CEEEEEeCCCCCCCHHHHHHHHHHcC---CCcE
Q 011425 186 RLPKFTVKMAVQYMRRVIQKKA-KFDIMDLNCLK-----LAPKTFI-PALFGHASEDKFIRARHSDLIFNAYA---GDKN 255 (486)
Q Consensus 186 ~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~l~~i~~-PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~ 255 (486)
..+.........++...+.... ..+..-.++.. ......+ |+|++.++.|.+. .....+++++. -.++
T Consensus 223 ~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~ 300 (336)
T KOG1515|consen 223 GSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVT 300 (336)
T ss_pred CCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEE
Confidence 1222222233333332222222 11111112221 2223344 5999999999886 44555555554 3455
Q ss_pred EEEeCC-CCCCC-------ChHHHHHHHHHHHHHh
Q 011425 256 IIKFDG-DHNSS-------RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 256 l~~~~g-gH~~~-------~p~~~~~~I~~FL~~~ 282 (486)
++.+++ .|.+. ...++.+.+.+|+...
T Consensus 301 ~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 301 LIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 666776 78643 2356777888888754
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-11 Score=126.06 Aligned_cols=249 Identities=16% Similarity=0.182 Sum_probs=165.7
Q ss_pred cCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH------HHHHhccCCeEEEEEcCCCC
Q 011425 31 AGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE------AAVILLPSNITLFTLDFSGS 104 (486)
Q Consensus 31 ~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~------~~~~L~~~Gy~Vv~~D~rG~ 104 (486)
..-.|+-++..+.+.||..|. .+-.|... +++|+|++.||+.+++..|.. ++-.|+++||.|..-+.||.
T Consensus 42 ~~~gy~~E~h~V~T~DgYiL~-lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn 117 (403)
T KOG2624|consen 42 EKYGYPVEEHEVTTEDGYILT-LHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGN 117 (403)
T ss_pred HHcCCceEEEEEEccCCeEEE-EeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCc
Confidence 334456688999999999444 45567632 789999999999998888743 56678999999999999997
Q ss_pred CCCC----------CCCCCCCcch--HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC----ccEEEEcCC
Q 011425 105 GLSD----------GDYVSLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSA 168 (486)
Q Consensus 105 G~S~----------~~~~~~~~~~--~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~----v~~lVl~sp 168 (486)
-.|. ..+..++|++ ..|+.+.|+++.+.-+.++++.+|||.|+.+...++...|+ |+.+++++|
T Consensus 118 ~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 118 TYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred ccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecc
Confidence 6553 1233445555 68999999999998777999999999999999999999876 999999999
Q ss_pred ccCHH---HHHHHHHHHH----------h---hhCCchh-HHHHHH-----------HH---------------------
Q 011425 169 FSDLF---DLMLELVDVY----------K---IRLPKFT-VKMAVQ-----------YM--------------------- 199 (486)
Q Consensus 169 ~~~~~---~~~~~~~~~~----------~---~~~p~~~-~~~~~~-----------~~--------------------- 199 (486)
..... .........+ . ..+|... ...... ..
T Consensus 198 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~ 277 (403)
T KOG2624|consen 198 AAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLP 277 (403)
T ss_pred hhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccc
Confidence 87332 1111111100 0 0001000 000000 00
Q ss_pred ---------------HHHHhh-----hhcccccc----------cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHH
Q 011425 200 ---------------RRVIQK-----KAKFDIMD----------LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249 (486)
Q Consensus 200 ---------------~~~~~~-----~~~~~~~~----------~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 249 (486)
....+. ...++... ..+...+.++++|+.+.+|..|.++.++.+..+...
T Consensus 278 ~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~ 357 (403)
T KOG2624|consen 278 VYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLV 357 (403)
T ss_pred hhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHh
Confidence 000000 00011110 012234566899999999999999999999988888
Q ss_pred cCCCcEE--EEeCC-CCCCC-----ChHHHHHHHHHHHHHhc
Q 011425 250 YAGDKNI--IKFDG-DHNSS-----RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 250 l~~~~~l--~~~~g-gH~~~-----~p~~~~~~I~~FL~~~l 283 (486)
+...... +.++. .|... .++.+++.|.+.+....
T Consensus 358 ~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 358 LPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 7654432 22456 88754 47889999998888654
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-11 Score=116.73 Aligned_cols=181 Identities=17% Similarity=0.176 Sum_probs=112.8
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHH--HHHhcc-CCeEEEEEcCCCCCCCCCCC------CCCCcchHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVILLP-SNITLFTLDFSGSGLSDGDY------VSLGWHEKD 120 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~--~~~L~~-~Gy~Vv~~D~rG~G~S~~~~------~~~~~~~~~ 120 (486)
|.|.+|+|.+.+. .+.|+||++||.+++...+... ...+++ +||.|+.++..........+ ...+..+..
T Consensus 1 l~Y~lYvP~~~~~-~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAPR-GPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCCC-CCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 4678999986543 4689999999999998876542 223444 58999999865322111111 111223466
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH--HHHHHHHHHHhhhCCchhHHHH
Q 011425 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--DLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~--~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
.+..+|+++..++.+ .+|++.|+|.||+++..++..+|+ +.++.+.++..... .....+ ..........+...
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~-~~m~~g~~~~p~~~- 157 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASAL-SAMRSGPRPAPAAA- 157 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHH-HHhhCCCCCChHHH-
Confidence 788899999888766 799999999999999999999999 78877766543210 000000 00000000000000
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
..... . ... .-..|++++||+.|..|.+....++.+.+
T Consensus 158 ~~a~~--------------~-~g~--~~~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 158 WGARS--------------D-AGA--YPGYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred HHhhh--------------h-ccC--CCCCCEEEEecCCCCccCcchHHHHHHHH
Confidence 00000 0 000 11259999999999999999888877765
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=3e-11 Score=121.08 Aligned_cols=226 Identities=17% Similarity=0.188 Sum_probs=135.9
Q ss_pred EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhH-HHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch
Q 011425 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~-~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~ 118 (486)
....+..+.+.+|.| ........|+||++||++ ++.... ..+...+...|+.|+.+|||-. +..... ..
T Consensus 57 ~~~~~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla---Pe~~~p---~~ 129 (312)
T COG0657 57 AGPSGDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA---PEHPFP---AA 129 (312)
T ss_pred cCCCCCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC---CCCCCC---ch
Confidence 344555677889988 222445689999999997 334444 3455566668999999999933 322221 22
Q ss_pred HHHHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHhcC-----CCccEEEEcCCccCHHHHHHHHHHHHhhhCC
Q 011425 119 KDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAED-----PSIAGMVLDSAFSDLFDLMLELVDVYKIRLP 188 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~~~-----p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p 188 (486)
++|+.+++.|+.++.. .++|+|+|+|.||.+++.++... |...+.++++|..+... .......+. ...
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~-~~~ 207 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYG-EAD 207 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcC-Ccc
Confidence 6899999999997732 48999999999999999887653 24799999999877554 111111111 111
Q ss_pred chhHHHHH-HHHHHHHhhhhcccccccchh--hhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-
Q 011425 189 KFTVKMAV-QYMRRVIQKKAKFDIMDLNCL--KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG- 261 (486)
Q Consensus 189 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g- 261 (486)
.+...... .+.................+. ..+.. -.|+++++|+.|.+.+ +...+.+++. ...+++.+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~ 284 (312)
T COG0657 208 LLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGM 284 (312)
T ss_pred ccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCc
Confidence 11122222 122221111111000001111 11233 4689999999999988 5566666553 4568888998
Q ss_pred CCCCC--C---hHHHHHHHHHHHH
Q 011425 262 DHNSS--R---PQFYYDSVSIFFY 280 (486)
Q Consensus 262 gH~~~--~---p~~~~~~I~~FL~ 280 (486)
.|.+. . .......+.+|+.
T Consensus 285 ~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 285 IHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred ceeccccCcHHHHHHHHHHHHHHH
Confidence 88653 2 2233445556655
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.3e-12 Score=120.19 Aligned_cols=186 Identities=19% Similarity=0.177 Sum_probs=111.4
Q ss_pred EEEeCCCCC---ChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhc-----CCCCcEE
Q 011425 69 VVYCHGNSG---CRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGN-----KQTSRIG 139 (486)
Q Consensus 69 VV~lHG~gg---~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~-----~~~~~i~ 139 (486)
||++||++. +......++..++. .|+.|+.+|||=..+. . . ...++|+.++++|+.+. .+.++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~---~--~-p~~~~D~~~a~~~l~~~~~~~~~d~~~i~ 74 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA---P--F-PAALEDVKAAYRWLLKNADKLGIDPERIV 74 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS---S--T-THHHHHHHHHHHHHHHTHHHHTEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc---c--c-cccccccccceeeeccccccccccccceE
Confidence 799999973 44555666777765 7999999999943221 1 1 13389999999999998 4458999
Q ss_pred EEEEcchHHHHHHHHhcC-----CCccEEEEcCCccCH-HHHHHHH--HHHHhhhCCchhHHHHHHHHHHHHhhhhcccc
Q 011425 140 LWGRSMGAVTSLLYGAED-----PSIAGMVLDSAFSDL-FDLMLEL--VDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (486)
Q Consensus 140 LvGhSmGG~lAl~~A~~~-----p~v~~lVl~sp~~~~-~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 211 (486)
|+|+|.||.+++.++... +.++++++++|..++ ....... .... ...+.........+...... ......
T Consensus 75 l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 152 (211)
T PF07859_consen 75 LIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNEN-KDDPFLPAPKIDWFWKLYLP-GSDRDD 152 (211)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHH-STTSSSBHHHHHHHHHHHHS-TGGTTS
T ss_pred Eeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccc-cccccccccccccccccccc-cccccc
Confidence 999999999999988642 238999999998765 1100111 1111 11122222222222222221 111111
Q ss_pred cccchhhh--CCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCC
Q 011425 212 MDLNCLKL--APKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNS 265 (486)
Q Consensus 212 ~~~~~~~~--l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~ 265 (486)
...++... +.. -.|+++++|+.|.++ ..+..+++++. ..++++++++ +|.+
T Consensus 153 ~~~sp~~~~~~~~-~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 153 PLASPLNASDLKG-LPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp TTTSGGGSSCCTT-CHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred ccccccccccccc-CCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 11222222 222 359999999999875 46677777664 4578889998 8864
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.1e-10 Score=115.23 Aligned_cols=233 Identities=13% Similarity=0.100 Sum_probs=144.3
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH-------HHHH-------hccCCeEEEEEcCCCCC-CCCCC
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-------AAVI-------LLPSNITLFTLDFSGSG-LSDGD 110 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~-------~~~~-------L~~~Gy~Vv~~D~rG~G-~S~~~ 110 (486)
++..|.|..|--- ......+||++||+.++...... +.+. +--..|-||++|..|.. .|.++
T Consensus 34 ~~~~vay~T~Gtl---n~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP 110 (368)
T COG2021 34 SDARVAYETYGTL---NAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGP 110 (368)
T ss_pred cCcEEEEEecccc---cccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCC
Confidence 3456777776322 22456799999999986433221 2222 33346999999999875 33322
Q ss_pred ----CC------CCCcchHHHHHHHHHHHHhcCCCCcEE-EEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH--HHH
Q 011425 111 ----YV------SLGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--DLM 176 (486)
Q Consensus 111 ----~~------~~~~~~~~Dl~~~i~~l~~~~~~~~i~-LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~--~~~ 176 (486)
+. .+....+.|+..+-..|.+.+++.++. |+|-||||+.++.++..+|+ |..+|.++...... ...
T Consensus 111 ~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia 190 (368)
T COG2021 111 SSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA 190 (368)
T ss_pred CCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH
Confidence 11 112234778887778888888998876 99999999999999999998 87777666543221 111
Q ss_pred -HHHHHHHhhhCCch----------------------------------------------------hHHHHHHHHHHHH
Q 011425 177 -LELVDVYKIRLPKF----------------------------------------------------TVKMAVQYMRRVI 203 (486)
Q Consensus 177 -~~~~~~~~~~~p~~----------------------------------------------------~~~~~~~~~~~~~ 203 (486)
..........-|.+ ......++....+
T Consensus 191 ~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf 270 (368)
T COG2021 191 FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKF 270 (368)
T ss_pred HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHH
Confidence 11111110011111 1111111111110
Q ss_pred hhhh-------------ccccc--ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC--CCCCC
Q 011425 204 QKKA-------------KFDIM--DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG--DHNSS 266 (486)
Q Consensus 204 ~~~~-------------~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g--gH~~~ 266 (486)
..+. .++.. .-+....+.++++|+|++.-+.|.++|++..+++.+.++....+++++. ||...
T Consensus 271 ~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaF 350 (368)
T COG2021 271 VARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAF 350 (368)
T ss_pred HhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhh
Confidence 0000 00000 1134455788999999999999999999999999999987665777765 89754
Q ss_pred --ChHHHHHHHHHHHHH
Q 011425 267 --RPQFYYDSVSIFFYN 281 (486)
Q Consensus 267 --~p~~~~~~I~~FL~~ 281 (486)
+.+.+...|..||..
T Consensus 351 L~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 351 LVESEAVGPLIRKFLAL 367 (368)
T ss_pred hcchhhhhHHHHHHhhc
Confidence 666777888888864
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.3e-11 Score=115.17 Aligned_cols=175 Identities=15% Similarity=0.122 Sum_probs=122.7
Q ss_pred EEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHh
Q 011425 52 CSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRG 131 (486)
Q Consensus 52 ~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~ 131 (486)
..++.|. ..+..|+|||+||+......|..+.+.++++||.|+++|+...+... ...+++++.++++|+.+
T Consensus 6 l~v~~P~---~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~------~~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 6 LLVYYPS---SAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD------DTDEVASAAEVIDWLAK 76 (259)
T ss_pred eEEEecC---CCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC------cchhHHHHHHHHHHHHh
Confidence 3467786 45789999999999977777888999999999999999976543311 11347889999999876
Q ss_pred cC----------CCCcEEEEEEcchHHHHHHHHhcC-----C-CccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 132 NK----------QTSRIGLWGRSMGAVTSLLYGAED-----P-SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 132 ~~----------~~~~i~LvGhSmGG~lAl~~A~~~-----p-~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
.. +..+++|.|||.||-++..++..+ + .++++|++.|....... ....|..
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~--------~~~~P~v----- 143 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG--------SQTEPPV----- 143 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc--------cCCCCcc-----
Confidence 32 236899999999999999998886 2 39999999998631110 0000000
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCC---------CCCHH-HHHHHHHHcCCCcEEEEeCC-CCC
Q 011425 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDK---------FIRAR-HSDLIFNAYAGDKNIIKFDG-DHN 264 (486)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~---------~vp~~-~~~~l~~~l~~~~~l~~~~g-gH~ 264 (486)
. ......-+..+|+++|....+. ..|.. .-.++++.+......++..+ ||+
T Consensus 144 ----------------~--~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 144 ----------------L--TYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHM 205 (259)
T ss_pred ----------------c--cCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCch
Confidence 0 0111222456899999887774 23333 56788888877766666666 998
Q ss_pred CC
Q 011425 265 SS 266 (486)
Q Consensus 265 ~~ 266 (486)
.+
T Consensus 206 d~ 207 (259)
T PF12740_consen 206 DF 207 (259)
T ss_pred Hh
Confidence 55
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.1e-11 Score=113.65 Aligned_cols=173 Identities=18% Similarity=0.193 Sum_probs=127.2
Q ss_pred cEEEEeCCCCC-ChhhHHHHHHHhccCCeEEEEEcCC-CCCCCCC-CCCCC-------Cc-chHHHHHHHHHHHHhcCCC
Q 011425 67 PCVVYCHGNSG-CRADANEAAVILLPSNITLFTLDFS-GSGLSDG-DYVSL-------GW-HEKDDLKVVVSYLRGNKQT 135 (486)
Q Consensus 67 p~VV~lHG~gg-~~~~~~~~~~~L~~~Gy~Vv~~D~r-G~G~S~~-~~~~~-------~~-~~~~Dl~~~i~~l~~~~~~ 135 (486)
.+||++.-..| ........+..++..||.|+++|+- |--.+.. +.... ++ ....++..+++||+.+...
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 45555554444 3444677889999999999999984 3111221 11110 11 1157899999999988767
Q ss_pred CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccc
Q 011425 136 SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN 215 (486)
Q Consensus 136 ~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (486)
.+|+++|++|||.++..+....+.+.++|...|... +
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~-------------------------------------------d 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFV-------------------------------------------D 156 (242)
T ss_pred ceeeEEEEeecceEEEEeeccchhheeeeEecCCcC-------------------------------------------C
Confidence 999999999999999999999988888887665432 1
Q ss_pred hhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCC----cEEEEeCC-CCCCC-------------ChHHHHHHHHH
Q 011425 216 CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD----KNIIKFDG-DHNSS-------------RPQFYYDSVSI 277 (486)
Q Consensus 216 ~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~----~~l~~~~g-gH~~~-------------~p~~~~~~I~~ 277 (486)
...+.++++|+|++.|+.|.++|+.....+-+.+... .++.+|+| +|.++ ..++.++.+..
T Consensus 157 -~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~ 235 (242)
T KOG3043|consen 157 -SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFIS 235 (242)
T ss_pred -hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHH
Confidence 1344578899999999999999999999988888643 35889999 88755 13567788889
Q ss_pred HHHHhc
Q 011425 278 FFYNVL 283 (486)
Q Consensus 278 FL~~~l 283 (486)
||..++
T Consensus 236 Wf~~y~ 241 (242)
T KOG3043|consen 236 WFKHYL 241 (242)
T ss_pred HHHHhh
Confidence 998875
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-10 Score=106.98 Aligned_cols=178 Identities=19% Similarity=0.243 Sum_probs=125.6
Q ss_pred CCcEEEEeCCCCCChhhHHH----HHHHhccCCeEEEEEcCCCC----CCC--CC-----CCC-----CCCcch------
Q 011425 65 PLPCVVYCHGNSGCRADANE----AAVILLPSNITLFTLDFSGS----GLS--DG-----DYV-----SLGWHE------ 118 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~----~~~~L~~~Gy~Vv~~D~rG~----G~S--~~-----~~~-----~~~~~~------ 118 (486)
.++-||++||+-.+...|.. +...+.+. +..+.+|-|-- +.+ .+ .+. ...|..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 46889999999988777654 33344444 67777777621 111 10 000 112211
Q ss_pred ------HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc---------CCCccEEEEcCCccCHHHHHHHHHHHH
Q 011425 119 ------KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE---------DPSIAGMVLDSAFSDLFDLMLELVDVY 183 (486)
Q Consensus 119 ------~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~---------~p~v~~lVl~sp~~~~~~~~~~~~~~~ 183 (486)
-+.+..+.+|+.++.+.+ +|+|+|.|+.++..++.. .|.++-+|+++++.......
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~------- 153 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL------- 153 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh-------
Confidence 233666777777764444 799999999999988872 34479999999886421000
Q ss_pred hhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCC
Q 011425 184 KIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDH 263 (486)
Q Consensus 184 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH 263 (486)
+.....+.+++|.|.|.|+.|.+++...+..|++.+.++ .++..+|||
T Consensus 154 -------------------------------~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~vl~HpggH 201 (230)
T KOG2551|consen 154 -------------------------------DESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-TVLEHPGGH 201 (230)
T ss_pred -------------------------------hhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC-eEEecCCCc
Confidence 111234578899999999999999999999999999776 677789999
Q ss_pred CCCChHHHHHHHHHHHHHhcC
Q 011425 264 NSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 264 ~~~~p~~~~~~I~~FL~~~l~ 284 (486)
+.++...+.+.|.+||+..+.
T Consensus 202 ~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 202 IVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred cCCCchHHHHHHHHHHHHHHH
Confidence 999888999999999998764
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.6e-11 Score=116.96 Aligned_cols=183 Identities=21% Similarity=0.273 Sum_probs=129.2
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~ 117 (486)
+...+.+.||.+|-....--.+...+....+||++-|..|.-+. .+...-++.||.|+.+++||++.|.|.+... .
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~--n 290 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV--N 290 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcc--c
Confidence 45667888999888765543333344567899999999875332 1233334569999999999999999987655 3
Q ss_pred hHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 118 EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
+...+.+++++.....+. +.|+++|+|.||..+.++|..+|+|+++|+.+.+-++..+.... .|.+....
T Consensus 291 ~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~r-------MP~~~~gi- 362 (517)
T KOG1553|consen 291 TLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFR-------MPTFFSGI- 362 (517)
T ss_pred chHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhh-------chHHHHHH-
Confidence 367777888888877655 78999999999999999999999999999999887765433221 22211111
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
....+. ..+..+..+.+.+.+-|+.+|.-.+|+++..
T Consensus 363 ---V~~aiR-----nh~NLnnaell~ry~GPi~lIRRt~dEIitt 399 (517)
T KOG1553|consen 363 ---VEHAIR-----NHMNLNNAELLARYKGPIRLIRRTQDEIITT 399 (517)
T ss_pred ---HHHHHH-----HhcccchHHHHHhhcCchhHhhhhhHhhhhc
Confidence 111111 1223345567778899999999999988653
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.5e-10 Score=107.78 Aligned_cols=205 Identities=12% Similarity=0.142 Sum_probs=118.2
Q ss_pred cEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcch
Q 011425 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmG 146 (486)
++|+++||.+|+...|..+++.+....+.|+.++++|.+.... ...+. .+-+...++.++.....+++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~--~~~si--~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP--PPDSI--EELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH--EESSH--HHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC--CCCCH--HHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 4799999999999999999999987559999999999982221 11121 2334445566666655569999999999
Q ss_pred HHHHHHHHhcC----CCccEEEEcCCccCH-H---HH-------HHHHHHHHhhhCC-chhH-HHHHHHHHHHHhhhhcc
Q 011425 147 AVTSLLYGAED----PSIAGMVLDSAFSDL-F---DL-------MLELVDVYKIRLP-KFTV-KMAVQYMRRVIQKKAKF 209 (486)
Q Consensus 147 G~lAl~~A~~~----p~v~~lVl~sp~~~~-~---~~-------~~~~~~~~~~~~p-~~~~-~~~~~~~~~~~~~~~~~ 209 (486)
|.+|+.+|.+. ..+..++++++.... . .. ............. .... .....++..........
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQAL 156 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHH
Confidence 99999998763 238899988854321 1 00 0011111110000 0000 00111111111111000
Q ss_pred cccccchhhhCCCCCCCEEEEEeCCCCCCCHH---HHHHHHHHcCCCcEEEEeCCCCCCC-C--hHHHHHHHHHH
Q 011425 210 DIMDLNCLKLAPKTFIPALFGHASEDKFIRAR---HSDLIFNAYAGDKNIIKFDGDHNSS-R--PQFYYDSVSIF 278 (486)
Q Consensus 210 ~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~---~~~~l~~~l~~~~~l~~~~ggH~~~-~--p~~~~~~I~~F 278 (486)
.. ........-.+|.++.....|+..... ....+.+......+++.++|+|+.+ . ..++.+.|.++
T Consensus 157 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~~~~~~i~~~I~~~ 228 (229)
T PF00975_consen 157 EN---YSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLKPHVAEIAEKIAEW 228 (229)
T ss_dssp HT---CS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHSTTHHHHHHHHHHH
T ss_pred hh---ccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecchHHHHHHHHHhcc
Confidence 00 000111111467899999999998777 3333555566677899999999976 3 33444444444
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.5e-11 Score=111.33 Aligned_cols=162 Identities=19% Similarity=0.269 Sum_probs=107.6
Q ss_pred cCCCcEEEEEEEecCCCCCCCCC-cEEEEeCCCCCChhhHHHHH-H-------HhccCCeEEEEEcCCC-CCCCCCCCCC
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPL-PCVVYCHGNSGCRADANEAA-V-------ILLPSNITLFTLDFSG-SGLSDGDYVS 113 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~-p~VV~lHG~gg~~~~~~~~~-~-------~L~~~Gy~Vv~~D~rG-~G~S~~~~~~ 113 (486)
..-|.+|.|.+|.|.+...+... |+|||+||.|....+..... . ...+.++-|+++.+-- +-.++...
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t-- 245 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT-- 245 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc--
Confidence 35789999999999876555555 99999999987655443221 1 1112245555655321 11122111
Q ss_pred CCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCch
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKF 190 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~ 190 (486)
..+. ..-+..+.+-+.+.+++ .+|+++|.|+||+.++.++.++|+ +++.+++++..+-...
T Consensus 246 ~~~l-~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~l--------------- 309 (387)
T COG4099 246 LLYL-IEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYL--------------- 309 (387)
T ss_pred chhH-HHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhh---------------
Confidence 1110 12222333366667666 799999999999999999999999 8999998887652000
Q ss_pred hHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC
Q 011425 191 TVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (486)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~ 251 (486)
... .-++|+.++|+.+|.++|.+.++.+++.+.
T Consensus 310 --------------------------v~~--lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 310 --------------------------VRT--LKKAPIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred --------------------------hhh--hccCceEEEEecCCCccccCcceeehHHHH
Confidence 011 224799999999999999998888877765
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.1e-11 Score=93.97 Aligned_cols=63 Identities=25% Similarity=0.359 Sum_probs=56.5
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
|.+|.+..|.|.. +++.+|+++||++.+...|..++..|+++||.|+++|+||||.|++....
T Consensus 1 G~~L~~~~w~p~~----~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~ 63 (79)
T PF12146_consen 1 GTKLFYRRWKPEN----PPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGH 63 (79)
T ss_pred CcEEEEEEecCCC----CCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccc
Confidence 6789999999863 26899999999999999999999999999999999999999999975543
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.8e-10 Score=106.78 Aligned_cols=178 Identities=13% Similarity=0.085 Sum_probs=123.4
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSY 128 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~ 128 (486)
.....++.|. ..+..|+|+|+||+.-....|..+...++++||.|+++++-..- . ..+..++++...+++|
T Consensus 32 PkpLlI~tP~---~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~--~----p~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 32 PKPLLIVTPS---EAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF--P----PDGQDEIKSAASVINW 102 (307)
T ss_pred CCCeEEecCC---cCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc--C----CCchHHHHHHHHHHHH
Confidence 4566678886 56889999999999988888899999999999999999986421 1 2334568999999999
Q ss_pred HHhcC----------CCCcEEEEEEcchHHHHHHHHhcCC-C--ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 129 LRGNK----------QTSRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 129 l~~~~----------~~~~i~LvGhSmGG~lAl~~A~~~p-~--v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
+.+.+ +..+++++|||.||-+|..+|..+. . +.++|.+.|........ ...|..
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~--------~t~P~i----- 169 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGK--------QTPPPI----- 169 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCC--------CCCCCe-----
Confidence 98753 2378999999999999999998774 3 89999888876522100 001110
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCC-------CCCCHH--HHHHHHHHcCCCcEEEEeCC-CCCC
Q 011425 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASED-------KFIRAR--HSDLIFNAYAGDKNIIKFDG-DHNS 265 (486)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D-------~~vp~~--~~~~l~~~l~~~~~l~~~~g-gH~~ 265 (486)
. .....--++.+|+++|...-- +-+.+. .-++++..++..+...+... ||+.
T Consensus 170 ----------------L--ty~p~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hfV~~dYGHmD 231 (307)
T PF07224_consen 170 ----------------L--TYVPQSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPCAHFVAKDYGHMD 231 (307)
T ss_pred ----------------e--ecCCcccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccceeeeeccccccc
Confidence 0 001112246689999986655 222232 44667777765554444444 9985
Q ss_pred C
Q 011425 266 S 266 (486)
Q Consensus 266 ~ 266 (486)
+
T Consensus 232 m 232 (307)
T PF07224_consen 232 M 232 (307)
T ss_pred c
Confidence 5
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-10 Score=119.73 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=80.3
Q ss_pred CCCcEEEEeCCCCCCh--hhHHH-HHHHhcc--CCeEEEEEcCCCCCCCCCCCCCCCc-chHHHHHHHHHHHHhcC--CC
Q 011425 64 TPLPCVVYCHGNSGCR--ADANE-AAVILLP--SNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYLRGNK--QT 135 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~--~~~~~-~~~~L~~--~Gy~Vv~~D~rG~G~S~~~~~~~~~-~~~~Dl~~~i~~l~~~~--~~ 135 (486)
...|++|++||++++. ..|.. ++..|.. ..|+|+++|++|+|.+......... ...+++.+++++|.+.. +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4579999999998653 34554 5555542 3699999999999987633221111 11467788888886543 35
Q ss_pred CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 136 SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 136 ~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
++++|+||||||.+|..++...|. |..+++++|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 899999999999999999998887 999999998754
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-10 Score=112.43 Aligned_cols=210 Identities=22% Similarity=0.287 Sum_probs=86.2
Q ss_pred CCcEEEEeCCCCCC---hhhHHHHHHHhccCCeEEEEEcCC----CCCCCCCCCCCCCcchHHHHHHHHHHHHhcC----
Q 011425 65 PLPCVVYCHGNSGC---RADANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---- 133 (486)
Q Consensus 65 ~~p~VV~lHG~gg~---~~~~~~~~~~L~~~Gy~Vv~~D~r----G~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~---- 133 (486)
...+|||+.|++.. ..+...++..|...||.|+-+-++ |+|.++- -.+++|+.++|+||+...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL------~~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL------DRDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H------HHHHHHHHHHHHHHHHHS----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh------hhHHHHHHHHHHHHHHhhcccc
Confidence 56799999999864 445677888888789999999875 5554431 144899999999999983
Q ss_pred CCCcEEEEEEcchHHHHHHHHhcC------CCccEEEEcCCccCHHH---------HHHHHHHHHh---------hhCCc
Q 011425 134 QTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFD---------LMLELVDVYK---------IRLPK 189 (486)
Q Consensus 134 ~~~~i~LvGhSmGG~lAl~~A~~~------p~v~~lVl~sp~~~~~~---------~~~~~~~~~~---------~~~p~ 189 (486)
..++|+|+|||-|+.-++.|+... +.|+++|+-+|..+... .......... ..+|.
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~ 185 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPR 185 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG--
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeec
Confidence 458999999999999999998764 23999999998764211 1111111110 00000
Q ss_pred hh-------HH-HHHHHHHHHH----hhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHH-HHHHHHHHcCC----
Q 011425 190 FT-------VK-MAVQYMRRVI----QKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAYAG---- 252 (486)
Q Consensus 190 ~~-------~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~l~~---- 252 (486)
-. .+ ....++.-.. ......++.+......+..+..|+|++.+.+|+.||.. ...++.+++..
T Consensus 186 ~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~ 265 (303)
T PF08538_consen 186 EFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNP 265 (303)
T ss_dssp --GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------------
T ss_pred cccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccccccccc
Confidence 00 00 0000000000 00000111122334567778899999999999999875 33444444331
Q ss_pred ---CcEEEEeCC-CCCCCCh------HHHHHHHHHHHH
Q 011425 253 ---DKNIIKFDG-DHNSSRP------QFYYDSVSIFFY 280 (486)
Q Consensus 253 ---~~~l~~~~g-gH~~~~p------~~~~~~I~~FL~ 280 (486)
....-+++| +|....+ +.+.+.|..||+
T Consensus 266 ~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 266 KIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccCC
Confidence 122346677 8987632 246677777763
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-09 Score=94.90 Aligned_cols=163 Identities=16% Similarity=0.164 Sum_probs=113.0
Q ss_pred CCCcEEEEeCCCCCChhh--HHHHHHHhccCCeEEEEEcCCCCCCCC-C---CCCCCCcchHHHHHHHHHHHHhcCCCCc
Q 011425 64 TPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSD-G---DYVSLGWHEKDDLKVVVSYLRGNKQTSR 137 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~--~~~~~~~L~~~Gy~Vv~~D~rG~G~S~-~---~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 137 (486)
...-+||+.||.|.+.+. +...+..|+.+|+.|..|+++..-... + .+.... .-......++..++......+
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~-t~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSG-TLNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccc-cCCHHHHHHHHHHHhcccCCc
Confidence 445688999999876554 566788899999999999998653222 1 111111 112445666677777766679
Q ss_pred EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC 216 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (486)
+++-|+||||-++..++..... |.++++++-++. .|..+.. --
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh---------------ppGKPe~---------------------~R 134 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH---------------PPGKPEQ---------------------LR 134 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCccC---------------CCCCccc---------------------ch
Confidence 9999999999999988876543 999998764432 1221110 11
Q ss_pred hhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCC
Q 011425 217 LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNS 265 (486)
Q Consensus 217 ~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~ 265 (486)
...+..+++|+||.+|+.|++-..+++.. -.+....+++++++ +|..
T Consensus 135 t~HL~gl~tPtli~qGtrD~fGtr~~Va~--y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 135 TEHLTGLKTPTLITQGTRDEFGTRDEVAG--YALSDPIEVVWLEDADHDL 182 (213)
T ss_pred hhhccCCCCCeEEeecccccccCHHHHHh--hhcCCceEEEEeccCcccc
Confidence 24567789999999999999988776632 23456778888887 7864
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.7e-10 Score=101.13 Aligned_cols=148 Identities=18% Similarity=0.203 Sum_probs=91.5
Q ss_pred EEEeCCCCCCh-hhHHHHH-HHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC--CCcEEEEEEc
Q 011425 69 VVYCHGNSGCR-ADANEAA-VILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRS 144 (486)
Q Consensus 69 VV~lHG~gg~~-~~~~~~~-~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhS 144 (486)
|+++||++++. ..|+... ..|... +.|-.+++- ..++.+.+..|.+... .++++|||||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------------~P~~~~W~~~l~~~i~~~~~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD----------------NPDLDEWVQALDQAIDAIDEPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T----------------S--HHHHHHHHHHCCHC-TTTEEEEEET
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC----------------CCCHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 68999999874 4566654 455554 777776651 1234555555555433 2679999999
Q ss_pred chHHHHHHHH-hcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC
Q 011425 145 MGAVTSLLYG-AEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK 222 (486)
Q Consensus 145 mGG~lAl~~A-~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (486)
+|+.+++.++ ..... |.+++|++|+..... ....+. ...+.. .....
T Consensus 64 LGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~---------~~~~~~----------------~~~f~~------~p~~~ 112 (171)
T PF06821_consen 64 LGCLTALRWLAEQSQKKVAGALLVAPFDPDDP---------EPFPPE----------------LDGFTP------LPRDP 112 (171)
T ss_dssp HHHHHHHHHHHHTCCSSEEEEEEES--SCGCH---------HCCTCG----------------GCCCTT------SHCCH
T ss_pred HHHHHHHHHHhhcccccccEEEEEcCCCcccc---------cchhhh----------------cccccc------Ccccc
Confidence 9999999999 44444 999999999965200 000000 000000 01112
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 011425 223 TFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 223 i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~ 266 (486)
+.+|.++|.+++|+.+|++.+..+++.+. .+++.+++ ||+..
T Consensus 113 l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 113 LPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNA 155 (171)
T ss_dssp HHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSG
T ss_pred cCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCccc
Confidence 34678999999999999999999999994 46777776 99965
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.4e-10 Score=108.71 Aligned_cols=218 Identities=17% Similarity=0.185 Sum_probs=135.6
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH-H-HHHHhccCCeEEEEEcCCCCCCCCCCCCCC------------
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-E-AAVILLPSNITLFTLDFSGSGLSDGDYVSL------------ 114 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~-~-~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~------------ 114 (486)
.-+..+..|... ..+.+|++|.+.|.|...-... . ++..|++.|+..+.+..|.||.........
T Consensus 76 ~a~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~ 154 (348)
T PF09752_consen 76 TARFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVM 154 (348)
T ss_pred heEEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHH
Confidence 345556667643 2456899999999987543322 2 377888889999999999999765321111
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH---H-HHH------HHHHHHH
Q 011425 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---F-DLM------LELVDVY 183 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~---~-~~~------~~~~~~~ 183 (486)
+...+.+...++.|++++ +..+++|.|.||||.+|..+|+..|. |..+-.+++.... . ..+ ..+...+
T Consensus 155 g~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~ 233 (348)
T PF09752_consen 155 GRATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQF 233 (348)
T ss_pred HhHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHh
Confidence 112266788889999998 77899999999999999999999998 4444444433211 0 000 0010000
Q ss_pred h--------hhCCc-------------hhHHHHHHHHHHHHhhhhcccccccchhhhCCCC-----CCCEEEEEeCCCCC
Q 011425 184 K--------IRLPK-------------FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT-----FIPALFGHASEDKF 237 (486)
Q Consensus 184 ~--------~~~p~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-----~~PvLii~G~~D~~ 237 (486)
. ...+. ........++...+ +....+.+. .-.++++.+++|..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~m-----------d~~T~l~nf~~P~dp~~ii~V~A~~DaY 302 (348)
T PF09752_consen 234 EDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVM-----------DSFTHLTNFPVPVDPSAIIFVAAKNDAY 302 (348)
T ss_pred cccchhhhhcccccCcccccchhhccccchHHHHHHHHHHH-----------HhhccccccCCCCCCCcEEEEEecCceE
Confidence 0 00000 00000111111111 111122222 23588999999999
Q ss_pred CCHHHHHHHHHHcCCCcEEEEeCCCCCCC---ChHHHHHHHHHHHH
Q 011425 238 IRARHSDLIFNAYAGDKNIIKFDGDHNSS---RPQFYYDSVSIFFY 280 (486)
Q Consensus 238 vp~~~~~~l~~~l~~~~~l~~~~ggH~~~---~p~~~~~~I~~FL~ 280 (486)
||...+..+.+..++ .++.+++|||... +.+.|.+.|.+=|+
T Consensus 303 VPr~~v~~Lq~~WPG-sEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 303 VPRHGVLSLQEIWPG-SEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred echhhcchHHHhCCC-CeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 999999988888765 6788899999854 67777787776554
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.1e-11 Score=116.56 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=78.4
Q ss_pred CCCcEEEEeCCCCCCh-hhHHH-HHHHhc-cCCeEEEEEcCCCCCCCCCCCCCCCcc-hHHHHHHHHHHHHhcC--CCCc
Q 011425 64 TPLPCVVYCHGNSGCR-ADANE-AAVILL-PSNITLFTLDFSGSGLSDGDYVSLGWH-EKDDLKVVVSYLRGNK--QTSR 137 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~-~~~~~-~~~~L~-~~Gy~Vv~~D~rG~G~S~~~~~~~~~~-~~~Dl~~~i~~l~~~~--~~~~ 137 (486)
..+|++|++||++++. ..|.. +...++ ..+|+|+++|+++++............ ..+++..+++++.+.. ..++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 4578999999999887 55544 444444 457999999999874322100000111 1357788888887753 3478
Q ss_pred EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
++|+||||||.+|..++...+. |..+|++.|...
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 9999999999999999999886 999999988754
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.3e-09 Score=108.44 Aligned_cols=244 Identities=16% Similarity=0.128 Sum_probs=137.5
Q ss_pred cccCcceeEE-EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-HHHHHHhccCCeEEEEEcCCCCCC
Q 011425 29 MLAGRSYKRQ-DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSGSGL 106 (486)
Q Consensus 29 ~~~~~~~~~~-~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-~~~~~~L~~~Gy~Vv~~D~rG~G~ 106 (486)
.+.|..+.-. ++.+.. +-.+| .+|.|.........|.||++..+.+..... ..+++.|.. |+.|++.|+..-+.
T Consensus 67 ~~~~~~~~v~e~vV~~~-~~~~L--~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~ 142 (406)
T TIGR01849 67 EVDGKDVPIRERVVWDK-PFCRL--IHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARM 142 (406)
T ss_pred EECCEEeeeEEEEEEEC-CCeEE--EEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCC
Confidence 4555544323 333433 33333 356564211112247999999998765544 457888999 99999999986664
Q ss_pred CCCCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-----CC-ccEEEEcCCccCHHH---HH
Q 011425 107 SDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-----PS-IAGMVLDSAFSDLFD---LM 176 (486)
Q Consensus 107 S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-----p~-v~~lVl~sp~~~~~~---~~ 176 (486)
.+-....+++.+ ++-+.++++.+ +.+ +.|+|+|+||.+++.+++.. |. ++.+++++++.++.. ..
T Consensus 143 vp~~~~~f~ldDYi~~l~~~i~~~----G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v 217 (406)
T TIGR01849 143 VPLSAGKFDLEDYIDYLIEFIRFL----GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVV 217 (406)
T ss_pred CchhcCCCCHHHHHHHHHHHHHHh----CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchH
Confidence 432222223211 22233333322 444 99999999999987666553 43 999999888765321 01
Q ss_pred HHH---------HHHH-----------h-hhCCchhHHH-------------HHHHHHHHHhhh-------h-c----cc
Q 011425 177 LEL---------VDVY-----------K-IRLPKFTVKM-------------AVQYMRRVIQKK-------A-K----FD 210 (486)
Q Consensus 177 ~~~---------~~~~-----------~-~~~p~~~~~~-------------~~~~~~~~~~~~-------~-~----~~ 210 (486)
..+ .... + ..+|++.... ..+++....... . . .+
T Consensus 218 ~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d 297 (406)
T TIGR01849 218 NELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLA 297 (406)
T ss_pred HHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhh
Confidence 100 0000 0 0233222111 111111111000 0 0 00
Q ss_pred cccc--------------------------chhhhCCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHc---C-CCcEEEEe
Q 011425 211 IMDL--------------------------NCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAY---A-GDKNIIKF 259 (486)
Q Consensus 211 ~~~~--------------------------~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l---~-~~~~l~~~ 259 (486)
..++ ...-.+.+|+ +|+|.+.|+.|.++|+..+..+.+.+ + ..+..+..
T Consensus 298 ~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~ 377 (406)
T TIGR01849 298 VMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQ 377 (406)
T ss_pred ccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeec
Confidence 0000 0111345588 99999999999999999999999985 4 34545555
Q ss_pred -CCCCCCC-----ChHHHHHHHHHHHHH
Q 011425 260 -DGDHNSS-----RPQFYYDSVSIFFYN 281 (486)
Q Consensus 260 -~ggH~~~-----~p~~~~~~I~~FL~~ 281 (486)
++||... ..++++..|.+||.+
T Consensus 378 ~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 378 PGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred CCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 6699854 567899999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.7e-11 Score=117.60 Aligned_cols=220 Identities=19% Similarity=0.166 Sum_probs=134.4
Q ss_pred EEEEEEEcCC-CcEEEEEEEecCCCCC---CCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC--CCCCCC
Q 011425 37 RQDLEIRNAR-GHVLQCSHYMPSPFPE---DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS--GLSDGD 110 (486)
Q Consensus 37 ~~~i~~~~~d-G~~L~~~~~~P~~~~~---~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~--G~S~~~ 110 (486)
...+++.... +..+...+|.|....+ ....|+||+-||.|+....|..+++.|++.||.|.+++++|. |.....
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~ 117 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAA 117 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChh
Confidence 4667776554 7788999999975322 136899999999999999999999999999999999999984 333311
Q ss_pred C------CC-CCcchHHHHHHHHHHHHhc---C------CCCcEEEEEEcchHHHHHHHHhcCCCcc-----E----EEE
Q 011425 111 Y------VS-LGWHEKDDLKVVVSYLRGN---K------QTSRIGLWGRSMGAVTSLLYGAEDPSIA-----G----MVL 165 (486)
Q Consensus 111 ~------~~-~~~~~~~Dl~~~i~~l~~~---~------~~~~i~LvGhSmGG~lAl~~A~~~p~v~-----~----lVl 165 (486)
. .. ..+....|+..++++|.+. . +..+|+++|||+||+.++.++.-..+.. | .+.
T Consensus 118 ~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~ 197 (365)
T COG4188 118 YAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRIC 197 (365)
T ss_pred hcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcc
Confidence 1 11 1133478899999998877 2 2379999999999999999886654311 1 111
Q ss_pred cCCcc-CHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhccccccc----chhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 166 DSAFS-DLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDL----NCLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 166 ~sp~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
..+.. +..... . ......+. ...++-...+ +..+..... =-...+..+++|++++.|..|.+.|+
T Consensus 198 ~~~~~~~~~~l~-q---~~av~~~~----~~~~~rDpri--ravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~ 267 (365)
T COG4188 198 LDPPGLNGRLLN-Q---CAAVWLPR----QAYDLRDPRI--RAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPP 267 (365)
T ss_pred cCCCCcChhhhc-c---ccccccch----hhhccccccc--eeeeeccCCcccccccccceeeecceeeecccccccCCc
Confidence 11111 100000 0 00000010 0000000000 000000000 00245667899999999999998776
Q ss_pred H-HHHHHHHHcCCC-cEEEEeCC-CCCCC
Q 011425 241 R-HSDLIFNAYAGD-KNIIKFDG-DHNSS 266 (486)
Q Consensus 241 ~-~~~~l~~~l~~~-~~l~~~~g-gH~~~ 266 (486)
. .....+..+++. +.+.+.++ .|+..
T Consensus 268 ~~~~~~~f~~l~g~~k~~~~vp~a~h~sf 296 (365)
T COG4188 268 VTEQIRPFGYLPGALKYLRLVPGATHFSF 296 (365)
T ss_pred ccccccccccCCcchhheeecCCCccccc
Confidence 5 455556666654 45666666 89865
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.7e-10 Score=121.38 Aligned_cols=118 Identities=19% Similarity=0.224 Sum_probs=82.5
Q ss_pred EEEEEcCCCcEEEEEEEecCC---CCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC-----
Q 011425 39 DLEIRNARGHVLQCSHYMPSP---FPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD----- 110 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~---~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~----- 110 (486)
.+.+..++|..|.+...-.-. ......+|+|||+||++++...|..++..|+.+||.|+++|+||||.|...
T Consensus 419 p~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 419 PVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred ceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 344555666555543311000 011234689999999999999999999999989999999999999999432
Q ss_pred -----CCCC-------------Cc-chHHHHHHHHHHHH------hc------CCCCcEEEEEEcchHHHHHHHHhc
Q 011425 111 -----YVSL-------------GW-HEKDDLKVVVSYLR------GN------KQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 111 -----~~~~-------------~~-~~~~Dl~~~i~~l~------~~------~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
.... .+ +.+.|+..+...+. .. .+..+++++||||||.+++.++..
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1111 11 22677777777776 22 234699999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.9e-10 Score=106.60 Aligned_cols=170 Identities=21% Similarity=0.219 Sum_probs=87.1
Q ss_pred CCcEEEEeCCCCCChhhHHHHH----HHhccCCeEEEEEcCCCCC-----CCCC----------CCCCCCcc-------h
Q 011425 65 PLPCVVYCHGNSGCRADANEAA----VILLPSNITLFTLDFSGSG-----LSDG----------DYVSLGWH-------E 118 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~----~~L~~~Gy~Vv~~D~rG~G-----~S~~----------~~~~~~~~-------~ 118 (486)
+++-||++||++.+...+.... ..|.+.++.++.+|-|--- ...- ......|. .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4689999999999998886643 3343337888888876321 1100 00000111 1
Q ss_pred HHHHHHHHHHHHhcCCC-C-cEEEEEEcchHHHHHHHHhc---------CCCccEEEEcCCccCHHHHHHHHHHHHhhhC
Q 011425 119 KDDLKVVVSYLRGNKQT-S-RIGLWGRSMGAVTSLLYGAE---------DPSIAGMVLDSAFSDLFDLMLELVDVYKIRL 187 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~-~-~i~LvGhSmGG~lAl~~A~~---------~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~ 187 (486)
..++...++++.+.... . -.+|+|+|.||.+|..++.. .+.++.+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 23344444444432111 2 35899999999999888753 2348999999887541100
Q ss_pred CchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCCC
Q 011425 188 PKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSR 267 (486)
Q Consensus 188 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~~ 267 (486)
+ ........|++|+|.|+|.+|.+++++.+..+++.+.+...++..+|||..+.
T Consensus 151 ---------------------~-----~~~~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~ 204 (212)
T PF03959_consen 151 ---------------------Y-----QELYDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPR 204 (212)
T ss_dssp ---------------------G-----TTTT--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS---
T ss_pred ---------------------h-----hhhhccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcC
Confidence 0 00012346789999999999999999999999998865477888999999885
Q ss_pred hHHHH
Q 011425 268 PQFYY 272 (486)
Q Consensus 268 p~~~~ 272 (486)
.....
T Consensus 205 ~~~~~ 209 (212)
T PF03959_consen 205 KKEDV 209 (212)
T ss_dssp -HHHH
T ss_pred Chhhc
Confidence 44433
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.8e-08 Score=98.64 Aligned_cols=219 Identities=16% Similarity=0.242 Sum_probs=135.2
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-------HHHHHHhccCCeEEEEEcCCCCCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-------NEAAVILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-------~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
..+.+.. |+..|-.....- +...+...||++-|.++.-+.. ..+.......|.+|+.++|||.|.|.|.
T Consensus 113 kRv~Iq~-D~~~IDt~~I~~---~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~ 188 (365)
T PF05677_consen 113 KRVPIQY-DGVKIDTMAIHQ---PEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP 188 (365)
T ss_pred eeEEEee-CCEEEEEEEeeC---CCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC
Confidence 4455554 888888766531 2446778999999999876652 1233333445899999999999999988
Q ss_pred CCCCCcchHHHHHHHHHHHHhcC---CCCcEEEEEEcchHHHHHHHHhcCC----C-ccEE-EEcCCccCHHHHHHHHHH
Q 011425 111 YVSLGWHEKDDLKVVVSYLRGNK---QTSRIGLWGRSMGAVTSLLYGAEDP----S-IAGM-VLDSAFSDLFDLMLELVD 181 (486)
Q Consensus 111 ~~~~~~~~~~Dl~~~i~~l~~~~---~~~~i~LvGhSmGG~lAl~~A~~~p----~-v~~l-Vl~sp~~~~~~~~~~~~~ 181 (486)
.... .-+.|..+.++||++.. ..++|++.|||+||.++..++.... + |+-+ |-.-++.++......+..
T Consensus 189 ~s~~--dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~~~ 266 (365)
T PF05677_consen 189 PSRK--DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQFFG 266 (365)
T ss_pred CCHH--HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHHHHH
Confidence 7532 22789999999999753 2389999999999999988666543 1 5533 334566665554433222
Q ss_pred HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCC-------CCCCCHHHHHHHHHHcCC--
Q 011425 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASE-------DKFIRARHSDLIFNAYAG-- 252 (486)
Q Consensus 182 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~-------D~~vp~~~~~~l~~~l~~-- 252 (486)
. ...++...+ .+ +.+..+....+.||-+++++.+ |..++++.+ ++..+..
T Consensus 267 ~------------~~~~l~~l~----gW---nidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~--lA~~~l~~~ 325 (365)
T PF05677_consen 267 P------------IGKLLIKLL----GW---NIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENC--LAAAFLDPP 325 (365)
T ss_pred H------------HHHHHHHHh----cc---CCCchhhhccCCCCeEEEeccccchhhcccccCCcchh--hHHHhcCCc
Confidence 1 112222221 22 2245566778889999999874 444444422 2222211
Q ss_pred -------CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 011425 253 -------DKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 253 -------~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l 283 (486)
.+..+.-.. .|...-.+...+.+..-+.+++
T Consensus 326 ~~~~~~~~Ki~i~~~~l~H~~~L~~~~~~~la~~I~~~~ 364 (365)
T PF05677_consen 326 TAEKLSGKKIPIGERLLLHNEPLDDETIQALAEHILDHF 364 (365)
T ss_pred ccccccccceecccccccccccCChHHHHHHHHHHHhhc
Confidence 222222222 6776655666666666655543
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.3e-10 Score=115.17 Aligned_cols=178 Identities=20% Similarity=0.297 Sum_probs=99.7
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC-CCC-----CC-----C-----CCC-----CC-------
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLS-----DG-----D-----YVS-----LG------- 115 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~-G~S-----~~-----~-----~~~-----~~------- 115 (486)
+..|+|||-||+++++..|..++..|+++||.|+++|+|.. +-. ++ . ... ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 67899999999999999999999999999999999999943 210 00 0 000 00
Q ss_pred c--------chHHHHHHHHHHHHhc----------------------CCCCcEEEEEEcchHHHHHHHHhcCCCccEEEE
Q 011425 116 W--------HEKDDLKVVVSYLRGN----------------------KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVL 165 (486)
Q Consensus 116 ~--------~~~~Dl~~~i~~l~~~----------------------~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl 165 (486)
+ ..+.++..+++.|.+. .+..+|+++|||+||.+++.++....++++.|+
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I~ 257 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEEE
Confidence 0 0144566677666531 112579999999999999999999988999999
Q ss_pred cCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHH
Q 011425 166 DSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (486)
Q Consensus 166 ~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 245 (486)
+.|+.-... + .....++.|+|+|+.+. +.-......
T Consensus 258 LD~W~~Pl~----------------------------------------~--~~~~~i~~P~L~InSe~--f~~~~~~~~ 293 (379)
T PF03403_consen 258 LDPWMFPLG----------------------------------------D--EIYSKIPQPLLFINSES--FQWWENIFR 293 (379)
T ss_dssp ES---TTS-----------------------------------------G--GGGGG--S-EEEEEETT--T--HHHHHH
T ss_pred eCCcccCCC----------------------------------------c--ccccCCCCCEEEEECcc--cCChhhHHH
Confidence 887752100 0 01134678999998875 323333333
Q ss_pred HHHHc--CCCcEEEEeCC-CCCCC---------------------Ch----HHHHHHHHHHHHHhcCC
Q 011425 246 IFNAY--AGDKNIIKFDG-DHNSS---------------------RP----QFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 246 l~~~l--~~~~~l~~~~g-gH~~~---------------------~p----~~~~~~I~~FL~~~l~~ 285 (486)
+.+.. .....++.+.| +|... +| +...+.+++||+++|..
T Consensus 294 ~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 294 MKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp HHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 33322 23456777787 89622 12 23456678899999764
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.5e-09 Score=98.49 Aligned_cols=181 Identities=15% Similarity=0.062 Sum_probs=122.4
Q ss_pred cEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcch
Q 011425 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmG 146 (486)
..+||+-|=||-...-..++..|+++|+.|+.+|-+-+=-+...+. +.+.|+..+|++.+++-+..+++|+|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~----~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFG 78 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPE----QTAADLARIIRHYRARWGRKRVVLIGYSFG 78 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHH----HHHHHHHHHHHHHHHHhCCceEEEEeecCC
Confidence 4678899988877666778999999999999999875544443332 337899999999999878899999999999
Q ss_pred HHHHHHHHhcCCC-----ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCC
Q 011425 147 AVTSLLYGAEDPS-----IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP 221 (486)
Q Consensus 147 G~lAl~~A~~~p~-----v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (486)
+-+.-.+..+.|. |..+++++|.......+ ....++...-+ -...+....+.
T Consensus 79 ADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFei-hv~~wlg~~~~----------------------~~~~~~~pei~ 135 (192)
T PF06057_consen 79 ADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEI-HVSGWLGMGGD----------------------DAAYPVIPEIA 135 (192)
T ss_pred chhHHHHHhhCCHHHHhheeEEEEeccCCcceEEE-EhhhhcCCCCC----------------------cccCCchHHHH
Confidence 9988888877774 99999998875421100 00000000000 00012233444
Q ss_pred CCC-CCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC-ChHHHHHHHHHHHH
Q 011425 222 KTF-IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS-RPQFYYDSVSIFFY 280 (486)
Q Consensus 222 ~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~-~p~~~~~~I~~FL~ 280 (486)
++. .|+++|+|.+|.-..-. . .-....+.+..+|||++. +.+.+.+.|++-++
T Consensus 136 ~l~~~~v~CiyG~~E~d~~cp---~---l~~~~~~~i~lpGgHHfd~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 136 KLPPAPVQCIYGEDEDDSLCP---S---LRQPGVEVIALPGGHHFDGDYDALAKRILDALK 190 (192)
T ss_pred hCCCCeEEEEEcCCCCCCcCc---c---ccCCCcEEEEcCCCcCCCCCHHHHHHHHHHHHh
Confidence 444 49999999988652211 1 112467888899988876 66777777776654
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.9e-09 Score=108.64 Aligned_cols=235 Identities=14% Similarity=0.207 Sum_probs=155.2
Q ss_pred cCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh--hhHHHHHHHhccCCeEEEEEcCCCCCCCC
Q 011425 31 AGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR--ADANEAAVILLPSNITLFTLDFSGSGLSD 108 (486)
Q Consensus 31 ~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~--~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~ 108 (486)
..-+|..+....++.||++|.|.+.. ++...+ +.|++|+--|+..-+ ..|......++++|...+..+.||-|+-.
T Consensus 388 Da~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfG 465 (648)
T COG1505 388 DADNYEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFG 465 (648)
T ss_pred CccCceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccC
Confidence 34456778888899999999999987 554444 778888777665432 23455557888999999999999988776
Q ss_pred CCCCCCCc-----chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHH---
Q 011425 109 GDYVSLGW-----HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML--- 177 (486)
Q Consensus 109 ~~~~~~~~-----~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~--- 177 (486)
......+. ...+|+.++.+.|.++.-. +++++.|-|-||.+.-.++.++|+ +.++|+-.|..++.+.-.
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~a 545 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTA 545 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhccccc
Confidence 43322221 1268999999999887322 689999999999999999999999 788888777776433211
Q ss_pred --HHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC--CCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-
Q 011425 178 --ELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIPALFGHASEDKFIRARHSDLIFNAYAG- 252 (486)
Q Consensus 178 --~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~~~~l~~~l~~- 252 (486)
.++..|+ .|..+.. ..+ +..+++.+.+.. .=.|+||-.+..|+.|.|.++++++.++..
T Consensus 546 G~sW~~EYG--~Pd~P~d--~~~------------l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~ 609 (648)
T COG1505 546 GSSWIAEYG--NPDDPED--RAF------------LLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEV 609 (648)
T ss_pred chhhHhhcC--CCCCHHH--HHH------------HHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhc
Confidence 1111111 1111110 011 112233344332 225899999999999999999999998762
Q ss_pred -CcEEEEe--CCCCCCCCh----HHHHHHHHHHHHHhc
Q 011425 253 -DKNIIKF--DGDHNSSRP----QFYYDSVSIFFYNVL 283 (486)
Q Consensus 253 -~~~l~~~--~ggH~~~~p----~~~~~~I~~FL~~~l 283 (486)
...++.. +|||..-.+ ......+..||.+.|
T Consensus 610 ~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 610 GAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred CCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 2223322 359986622 233445667887765
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-09 Score=102.89 Aligned_cols=164 Identities=18% Similarity=0.227 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHH
Q 011425 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQ 197 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 197 (486)
+-+..+++||+++..+ ++|+|+|.|.||-+|+.+|+.+|.|+++|+++|..-........... ...+|.........
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~-~~~lp~~~~~~~~~ 82 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDS-SKPLPYLPFDISKF 82 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE---EE----B-GGG-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCC-CccCCcCCcChhhc
Confidence 5688999999999766 69999999999999999999999999999998865432100000000 00011110000000
Q ss_pred --HHHHHHhhhhccccccc----chhhhCCCCCCCEEEEEeCCCCCCCHHHHH-HHHHHcCC-----CcEEEEeCC-CCC
Q 011425 198 --YMRRVIQKKAKFDIMDL----NCLKLAPKTFIPALFGHASEDKFIRARHSD-LIFNAYAG-----DKNIIKFDG-DHN 264 (486)
Q Consensus 198 --~~~~~~~~~~~~~~~~~----~~~~~l~~i~~PvLii~G~~D~~vp~~~~~-~l~~~l~~-----~~~l~~~~g-gH~ 264 (486)
...........+..... ...-.+.++++|+|+|.|++|.+.|..... .+.+++.. ..+++.|++ ||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 83 SWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S-
T ss_pred eecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCce
Confidence 00000000000000000 111235568999999999999999877544 44454431 357788887 997
Q ss_pred CC------------------------------ChHHHHHHHHHHHHHhcC
Q 011425 265 SS------------------------------RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 265 ~~------------------------------~p~~~~~~I~~FL~~~l~ 284 (486)
.. ..++.++.+++||+++|.
T Consensus 163 i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 163 IEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp --STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 42 014567889999998874
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.3e-08 Score=94.26 Aligned_cols=105 Identities=18% Similarity=0.245 Sum_probs=78.0
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhcc---CCeEEEEEcCCCCCCCCCCCC---CCCcch-HHHHHHHHHHHHhc---C--
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLP---SNITLFTLDFSGSGLSDGDYV---SLGWHE-KDDLKVVVSYLRGN---K-- 133 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~---~Gy~Vv~~D~rG~G~S~~~~~---~~~~~~-~~Dl~~~i~~l~~~---~-- 133 (486)
++.|||++|..|-.+.|..++..|.+ ..+.|+++.+.||-.++.... ...... .+.+...++++++. .
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 57899999999999999998877764 379999999999977664410 111111 23444444444443 2
Q ss_pred CCCcEEEEEEcchHHHHHHHHhcCC----CccEEEEcCCcc
Q 011425 134 QTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFS 170 (486)
Q Consensus 134 ~~~~i~LvGhSmGG~lAl~~A~~~p----~v~~lVl~sp~~ 170 (486)
...+++|+|||+|+++++.++.+.+ +|.+++++.|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 3478999999999999999999998 389999887754
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.4e-09 Score=104.72 Aligned_cols=202 Identities=13% Similarity=0.041 Sum_probs=130.1
Q ss_pred CCCcEEEEeCCCCCChhhH-----HHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcE
Q 011425 64 TPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRI 138 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~-----~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i 138 (486)
.-.++++++|.+-.....+ ..++.+|.++|+.|+.+++++-..+.+... ...+..+.+..+|+.+++..+.++|
T Consensus 105 v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~-~edYi~e~l~~aid~v~~itg~~~I 183 (445)
T COG3243 105 VLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKN-LEDYILEGLSEAIDTVKDITGQKDI 183 (445)
T ss_pred cCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhcc-HHHHHHHHHHHHHHHHHHHhCcccc
Confidence 3467888899886432222 457889999999999999987666654221 1112247888999999998888999
Q ss_pred EEEEEcchHHHHHHHHhcCCC--ccEEEEcCCccCHHH-----------HHHHHHHH--HhhhCCchhHHHHH-------
Q 011425 139 GLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFD-----------LMLELVDV--YKIRLPKFTVKMAV------- 196 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~p~--v~~lVl~sp~~~~~~-----------~~~~~~~~--~~~~~p~~~~~~~~------- 196 (486)
.++|||+||.++..+++..+. |+.++++....++.. .+...... ....+|+.......
T Consensus 184 nliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpnd 263 (445)
T COG3243 184 NLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPND 263 (445)
T ss_pred ceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccc
Confidence 999999999999998888774 888887665544321 00100000 00112221111111
Q ss_pred -------------------------------------HHHHHHHhhhhccc--ccccchhhhCCCCCCCEEEEEeCCCCC
Q 011425 197 -------------------------------------QYMRRVIQKKAKFD--IMDLNCLKLAPKTFIPALFGHASEDKF 237 (486)
Q Consensus 197 -------------------------------------~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLii~G~~D~~ 237 (486)
.+++..+....... +.-....-.+.+|+||++++.|+.|.+
T Consensus 264 liw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI 343 (445)
T COG3243 264 LIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHI 343 (445)
T ss_pred cchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeeccccc
Confidence 11111111110000 000011234667999999999999999
Q ss_pred CCHHHHHHHHHHcCCCcEEEEeCCCCCCC
Q 011425 238 IRARHSDLIFNAYAGDKNIIKFDGDHNSS 266 (486)
Q Consensus 238 vp~~~~~~l~~~l~~~~~l~~~~ggH~~~ 266 (486)
+|.+.+......+++.++++..++||...
T Consensus 344 ~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~ 372 (445)
T COG3243 344 APWSSVYLGARLLGGEVTFVLSRSGHIAG 372 (445)
T ss_pred CCHHHHHHHHHhcCCceEEEEecCceEEE
Confidence 99999999999999888999999999743
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.4e-09 Score=102.51 Aligned_cols=126 Identities=19% Similarity=0.264 Sum_probs=82.3
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH--HHHHHHhccCC----eEEEEEcCCCCCCCCCC---------C
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA--NEAAVILLPSN----ITLFTLDFSGSGLSDGD---------Y 111 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~--~~~~~~L~~~G----y~Vv~~D~rG~G~S~~~---------~ 111 (486)
|....+++|+|.+.....+.|+|+++||.......+ ...+..+...| ..+|+++..+.+..... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 667788899999876677899999999972222111 12233333332 55677776555411110 0
Q ss_pred -CCCCcc-hH-H-HHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH
Q 011425 112 -VSLGWH-EK-D-DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (486)
Q Consensus 112 -~~~~~~-~~-~-Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~ 172 (486)
...+.. .. . -..+++.++.+.+.. .+.+|+|+||||+.|+.++.++|+ +.+++++||....
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 011111 11 1 234677788887765 338999999999999999999999 9999999988553
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.2e-07 Score=93.84 Aligned_cols=199 Identities=17% Similarity=0.242 Sum_probs=112.8
Q ss_pred HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC------CCcEEEEEEcchHHHHHHHHhcC
Q 011425 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ------TSRIGLWGRSMGAVTSLLYGAED 157 (486)
Q Consensus 84 ~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~------~~~i~LvGhSmGG~lAl~~A~~~ 157 (486)
.++..++.+||.|+++||.|.|. .+ ..+......+.+.|+..++... ..+++++|||.||..++.++...
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~---~y-~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT---PY-LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC---cc-cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 45677778899999999999987 22 1222223344444444443222 26899999999999998776542
Q ss_pred ----CC----ccEEEEcCCccCHHHHHHHH------------HHHHhhhCCchh--HHH-----HHHHH----HHHHhh-
Q 011425 158 ----PS----IAGMVLDSAFSDLFDLMLEL------------VDVYKIRLPKFT--VKM-----AVQYM----RRVIQK- 205 (486)
Q Consensus 158 ----p~----v~~lVl~sp~~~~~~~~~~~------------~~~~~~~~p~~~--~~~-----~~~~~----~~~~~~- 205 (486)
|+ |.+.++.+++.++...+... +..+....|.+. +.. ....+ ..+...
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~ 172 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADI 172 (290)
T ss_pred HHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHH
Confidence 33 67788877777655433211 111112223222 100 00000 000000
Q ss_pred ---hhcccc---------cccch-----------hhhC-----CCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC----CC
Q 011425 206 ---KAKFDI---------MDLNC-----------LKLA-----PKTFIPALFGHASEDKFIRARHSDLIFNAYA----GD 253 (486)
Q Consensus 206 ---~~~~~~---------~~~~~-----------~~~l-----~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~----~~ 253 (486)
...... ...+. ...+ ...+.|++|.||..|.+||+.....+.+.+. .+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~ 252 (290)
T PF03583_consen 173 VAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGAD 252 (290)
T ss_pred HHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCC
Confidence 000000 00000 0111 1236899999999999999999988887753 35
Q ss_pred cEEEEeCC-CCCCCChHHHHHHHHHHHHHhcCCCC
Q 011425 254 KNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLHPPQ 287 (486)
Q Consensus 254 ~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~~~~ 287 (486)
++++.+++ +|.... ..-......||..++....
T Consensus 253 V~~~~~~~~~H~~~~-~~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 253 VEYVRYPGGGHLGAA-FASAPDALAWLDDRFAGKP 286 (290)
T ss_pred EEEEecCCCChhhhh-hcCcHHHHHHHHHHHCCCC
Confidence 67777776 897542 1223566799999987654
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.6e-07 Score=97.42 Aligned_cols=197 Identities=11% Similarity=0.054 Sum_probs=114.2
Q ss_pred EEEEc-CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh-hHHHHHHHhccCC----eEEEEEcCCCCCCCCCCCCC
Q 011425 40 LEIRN-ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSN----ITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 40 i~~~~-~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~-~~~~~~~~L~~~G----y~Vv~~D~rG~G~S~~~~~~ 113 (486)
+.+.+ .-|....+++|+|.+.. ..+.|+|+++||..-... .....+..|...| ..++.+|..+..........
T Consensus 183 ~~~~S~~Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~ 261 (411)
T PRK10439 183 IIWKSERLGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC 261 (411)
T ss_pred EEEEccccCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc
Confidence 44433 35778888999998654 467899999999652211 1233455555555 45678876321111111111
Q ss_pred CCcchHHHHHHHHHHHHhcCCC----CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCC
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLP 188 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~~----~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p 188 (486)
.......-+.+++-++.+++.. ++.+|+|+||||+.|+.++..+|+ +.+++.++|..-.... ..
T Consensus 262 ~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~-----------~~ 330 (411)
T PRK10439 262 NADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHR-----------GG 330 (411)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCc-----------cC
Confidence 1000011234556677666443 678999999999999999999999 8999999886421000 00
Q ss_pred chhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCCCCCC
Q 011425 189 KFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGDHNS 265 (486)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~ggH~~ 265 (486)
.....+...+. . .........++|-+|..|..+ ....+.+.+.+. -...+.+++|||..
T Consensus 331 -~~~~~l~~~l~----~------------~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~GGHd~ 392 (411)
T PRK10439 331 -QQEGVLLEQLK----A------------GEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDGGHDA 392 (411)
T ss_pred -CchhHHHHHHH----h------------cccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCCCcCH
Confidence 00000000000 0 001112245888889988654 445566666654 35778888999975
Q ss_pred C
Q 011425 266 S 266 (486)
Q Consensus 266 ~ 266 (486)
.
T Consensus 393 ~ 393 (411)
T PRK10439 393 L 393 (411)
T ss_pred H
Confidence 4
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.7e-09 Score=102.02 Aligned_cols=199 Identities=16% Similarity=0.128 Sum_probs=118.1
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhc-cCCe----EEEEEcCCCC----CCCCCC---C--------CC-CCc-chHHHH
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILL-PSNI----TLFTLDFSGS----GLSDGD---Y--------VS-LGW-HEKDDL 122 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~-~~Gy----~Vv~~D~rG~----G~S~~~---~--------~~-~~~-~~~~Dl 122 (486)
...+.||+||++++...+..++..+. +.|. -++.++--|. |.-... | .. ..+ ..+.-+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 45688999999999999999998886 5542 3455555553 221110 0 00 011 126678
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC------CCccEEEEcCCccCHHHHHHHHH--HHHhhhCCchhHHH
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFDLMLELV--DVYKIRLPKFTVKM 194 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~------p~v~~lVl~sp~~~~~~~~~~~~--~~~~~~~p~~~~~~ 194 (486)
..++.+|.++++..++-+|||||||..++.|+..+ |.+..+|.++++.+......... ......-|...
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~--- 166 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSM--- 166 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS----
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCccc---
Confidence 89999999999999999999999999999998874 44888998887765321100000 00000001111
Q ss_pred HHHHHHHHHhh-hhcccccccchhhhCCCCCCCEEEEEeC------CCCCCCHHHHHHHHHHcCCC---cEEEEeCC---
Q 011425 195 AVQYMRRVIQK-KAKFDIMDLNCLKLAPKTFIPALFGHAS------EDKFIRARHSDLIFNAYAGD---KNIIKFDG--- 261 (486)
Q Consensus 195 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~PvLii~G~------~D~~vp~~~~~~l~~~l~~~---~~l~~~~g--- 261 (486)
...+..++.. +. .+ .-.+.+|.|.|. .|..||...+..+...+.+. .+-.++.|
T Consensus 167 -~~~y~~l~~~~~~-----------~~-p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a 233 (255)
T PF06028_consen 167 -TPMYQDLLKNRRK-----------NF-PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDA 233 (255)
T ss_dssp --HHHHHHHHTHGG-----------GS-TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGG
T ss_pred -CHHHHHHHHHHHh-----------hC-CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCC
Confidence 1222222211 11 11 124679999999 89999999999988888642 23344444
Q ss_pred CCCCC-ChHHHHHHHHHHH
Q 011425 262 DHNSS-RPQFYYDSVSIFF 279 (486)
Q Consensus 262 gH~~~-~p~~~~~~I~~FL 279 (486)
.|... +-.++.+.|.+||
T Consensus 234 ~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 234 QHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp SCCGGGCCHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHh
Confidence 68755 6678889999997
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-07 Score=86.27 Aligned_cols=117 Identities=14% Similarity=0.039 Sum_probs=78.6
Q ss_pred CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccc
Q 011425 136 SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN 215 (486)
Q Consensus 136 ~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (486)
+++.|+|.|+||+.|..+|.++. + ..|+++|...+...+...... +.. .. .+....+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~-----~~~-y~---~~~~~h~~----------- 117 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDR-----PEE-YA---DIATKCVT----------- 117 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCC-----Ccc-hh---hhhHHHHH-----------
Confidence 57999999999999999999887 4 456678888876655444321 100 00 11111111
Q ss_pred hhhhCC-CCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHH
Q 011425 216 CLKLAP-KTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 216 ~~~~l~-~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~ 280 (486)
.+. .-.-..+++..+.|++.+...+.+.+... ..+++.+| +|.+..-+.+...|.+|+.
T Consensus 118 ---eL~~~~p~r~~vllq~gDEvLDyr~a~~~y~~~---y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 118 ---NFREKNRDRCLVILSRNDEVLDSQRTAEELHPY---YEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred ---HhhhcCcccEEEEEeCCCcccCHHHHHHHhccC---ceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 111 11124599999999999999887766543 24666676 7877788899999999985
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.8e-08 Score=91.30 Aligned_cols=188 Identities=14% Similarity=0.080 Sum_probs=125.5
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~ 125 (486)
.-...+|.|. ...+++||+||+- +++......+..+.++||+|..++|- .++.... . .+.+.++..-
T Consensus 55 ~q~VDIwg~~-----~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q~ht-L-~qt~~~~~~g 124 (270)
T KOG4627|consen 55 RQLVDIWGST-----NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQVHT-L-EQTMTQFTHG 124 (270)
T ss_pred ceEEEEecCC-----CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCccccc-H-HHHHHHHHHH
Confidence 3445577653 5679999999984 44555555667788889999999763 4432111 0 1236778888
Q ss_pred HHHHHhcCCC-CcEEEEEEcchHHHHHHHHhc--CCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHH
Q 011425 126 VSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAE--DPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRV 202 (486)
Q Consensus 126 i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~--~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 202 (486)
++|+.+.... ..+.+-|||.|+.+|+.+..+ .|+|.|+++.++...+.++...-.. ..-++..
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g----~dlgLt~---------- 190 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG----NDLGLTE---------- 190 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc----cccCccc----------
Confidence 8898887665 667888999999999988776 4569999999988775543321100 0000000
Q ss_pred HhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 011425 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~ 266 (486)
+.+.. .. -....+..++.|+|++.|..|.-.-.++.+.+...+.. ..+..|++ +|+..
T Consensus 191 --~~ae~--~S-cdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~n~~hy~I 249 (270)
T KOG4627|consen 191 --RNAES--VS-CDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFKNYDHYDI 249 (270)
T ss_pred --chhhh--cC-ccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeecCCcchhhH
Confidence 00000 00 01234556889999999999988888888998888765 56888898 99854
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.8e-07 Score=86.14 Aligned_cols=232 Identities=11% Similarity=0.094 Sum_probs=125.8
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-HHHHH-----HHhccCCeEEEEEcCCCCCCCCCC-CCCC
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAA-----VILLPSNITLFTLDFSGSGLSDGD-YVSL 114 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~~~~~-----~~L~~~Gy~Vv~~D~rG~G~S~~~-~~~~ 114 (486)
+.+.-| .|.+.++-. ..+++|+||-.|-.|-+... |..+. +.+.+ .|.|+-+|.||+...... +..+
T Consensus 4 v~t~~G-~v~V~v~G~----~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y 77 (283)
T PF03096_consen 4 VETPYG-SVHVTVQGD----PKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGY 77 (283)
T ss_dssp EEETTE-EEEEEEESS------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT-
T ss_pred eccCce-EEEEEEEec----CCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccccc
Confidence 444555 556556521 12369999999999977655 55432 34444 699999999999765432 2222
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhh------hC
Q 011425 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKI------RL 187 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~------~~ 187 (486)
.+-.++++++.+..+.+..+.+.++-+|--.||++..++|..+|+ |.|+||+++.......+......... .+
T Consensus 78 ~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gm 157 (283)
T PF03096_consen 78 QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGM 157 (283)
T ss_dssp ----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CT
T ss_pred cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccc
Confidence 333466666666666666688999999999999999999999998 99999999877654443333222211 01
Q ss_pred CchhHHH----------------HHHHHHHHHhhhhc-c--------cccccchhhhCCCCCCCEEEEEeCCCCCCCHHH
Q 011425 188 PKFTVKM----------------AVQYMRRVIQKKAK-F--------DIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (486)
Q Consensus 188 p~~~~~~----------------~~~~~~~~~~~~~~-~--------~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (486)
....... ..+..+..+..... . .....+.........||+|++.|...+. .+.
T Consensus 158 t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~~ 235 (283)
T PF03096_consen 158 TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VDD 235 (283)
T ss_dssp TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HHH
T ss_pred ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hhh
Confidence 1110000 11111111111100 0 0011233344556679999999999988 567
Q ss_pred HHHHHHHcCC-CcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 243 SDLIFNAYAG-DKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 243 ~~~l~~~l~~-~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+..+..++.+ ..+++.+++ |=... .|..+.+.+.=|++-
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 7888888864 456666665 54433 789999999888874
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.3e-08 Score=92.24 Aligned_cols=104 Identities=19% Similarity=0.202 Sum_probs=73.0
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhc--------cCCeEEEEEcCCCCCCCC-CCCCCCCcchHHHHHHHHHHHHhcC--
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILL--------PSNITLFTLDFSGSGLSD-GDYVSLGWHEKDDLKVVVSYLRGNK-- 133 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~--------~~Gy~Vv~~D~rG~G~S~-~~~~~~~~~~~~Dl~~~i~~l~~~~-- 133 (486)
.+.+|||+||.+|+...+..++..+. ...+.++++|+......- +... ....+.+..+++.+.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l---~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTL---QRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccH---HHHHHHHHHHHHHHHHhhhh
Confidence 46799999999999888777765552 225889999987542111 1110 012455667777776665
Q ss_pred ---CCCcEEEEEEcchHHHHHHHHhcCC---C-ccEEEEcCCccC
Q 011425 134 ---QTSRIGLWGRSMGAVTSLLYGAEDP---S-IAGMVLDSAFSD 171 (486)
Q Consensus 134 ---~~~~i~LvGhSmGG~lAl~~A~~~p---~-v~~lVl~sp~~~ 171 (486)
+..+|+|+||||||.++..++...+ . |+.+|.++.+..
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 4589999999999999988876644 2 899998876654
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.2e-07 Score=99.74 Aligned_cols=217 Identities=17% Similarity=0.181 Sum_probs=147.6
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh--hhHHHHHHHhccCCeEEEEEcCCCCCCCCC
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR--ADANEAAVILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~--~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
...|..+.+..+..||..|...+..-....-.++.|++|+.-|.-|.. ..|....-.|+++||......-||-|.-..
T Consensus 414 p~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~ 493 (682)
T COG1770 414 PEDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGR 493 (682)
T ss_pred hhHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccCh
Confidence 356788999899899999999998876655667889999988875542 334445557889999888888899887664
Q ss_pred CCCCCC-----cchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHH
Q 011425 110 DYVSLG-----WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD 181 (486)
Q Consensus 110 ~~~~~~-----~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~ 181 (486)
.....+ .....|+.++.++|.+..-. ++|+++|-|.||++...++...|+ ++++|+..||.++...+..-
T Consensus 494 ~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~-- 571 (682)
T COG1770 494 AWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDP-- 571 (682)
T ss_pred HHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCC--
Confidence 332221 13368999999999887433 689999999999999999999999 99999999999876544221
Q ss_pred HHhhhCCchh----------HHHHHHHHHHHHhhhhcccccccchhhhCCC-CCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 182 VYKIRLPKFT----------VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK-TFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 182 ~~~~~~p~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
.+|... .+...+++. .+++...+.. --.|+|++.|..|+.|..-+..+..+++
T Consensus 572 ----slPLT~~E~~EWGNP~d~e~y~yik------------SYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkL 635 (682)
T COG1770 572 ----SLPLTVTEWDEWGNPLDPEYYDYIK------------SYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKL 635 (682)
T ss_pred ----CCCCCccchhhhCCcCCHHHHHHHh------------hcCchhccccCCCCceEEEccccCCccccchHHHHHHHH
Confidence 111111 011111111 1233333322 2357899999999999876666655555
Q ss_pred C----CC-cEEEEe--CCCCCCC
Q 011425 251 A----GD-KNIIKF--DGDHNSS 266 (486)
Q Consensus 251 ~----~~-~~l~~~--~ggH~~~ 266 (486)
. .. ..+... .+||...
T Consensus 636 R~~~td~~plLlkt~M~aGHgG~ 658 (682)
T COG1770 636 RELKTDGNPLLLKTNMDAGHGGA 658 (682)
T ss_pred hhcccCCCcEEEEecccccCCCC
Confidence 3 22 222222 3599755
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.9e-08 Score=92.28 Aligned_cols=124 Identities=21% Similarity=0.194 Sum_probs=93.4
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHH--HHhcc-CCeEEEEEcCCC-------CCCCCCCC-CC
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA--VILLP-SNITLFTLDFSG-------SGLSDGDY-VS 113 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~--~~L~~-~Gy~Vv~~D~rG-------~G~S~~~~-~~ 113 (486)
.+|....|++|.|.+.+. ..|+||++||.+++...+.... ..|++ .||.|+.+|-.. .|.+.+.. ..
T Consensus 42 ~~g~~r~y~l~vP~g~~~--~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~ 119 (312)
T COG3509 42 VNGLKRSYRLYVPPGLPS--GAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR 119 (312)
T ss_pred cCCCccceEEEcCCCCCC--CCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc
Confidence 578889999999987544 3499999999999987776644 44554 599999995432 12221111 13
Q ss_pred CCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~ 170 (486)
.+.+++..+.++++.|...+.+ .+|++.|.|-||.++..++..+|+ +.++.++++..
T Consensus 120 ~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 3446688899999999998887 599999999999999999999998 67776666554
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1e-07 Score=99.50 Aligned_cols=241 Identities=17% Similarity=0.183 Sum_probs=151.6
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh--hHHHHHHHhccCCeEEEEEcCCCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~--~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~ 111 (486)
.|..+.+.+.+.||..+...+..-......++.|++|+.+|.-+-.- .|..-...|.++|+.....|.||-|+-...+
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~W 517 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQW 517 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccch
Confidence 46778899999999999999988655555678999999888765432 2333334577789999999999988776444
Q ss_pred CCCCc-----chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHH
Q 011425 112 VSLGW-----HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVY 183 (486)
Q Consensus 112 ~~~~~-----~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~ 183 (486)
...+. ...+|+.+.++||.++.-. .++.+.|.|.||.++..+...+|+ +.++|+-.|++++...+....
T Consensus 518 Hk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~ti--- 594 (712)
T KOG2237|consen 518 HKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTI--- 594 (712)
T ss_pred hhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCc---
Confidence 43332 2379999999999987433 789999999999999999999999 899999999988654332110
Q ss_pred hhhCCchhHHHHHHHHHHHH--hhhhcccccccchhhhCCC-C-CCCEEEEEeCCCCCCCHHHHHHHHHHcC--------
Q 011425 184 KIRLPKFTVKMAVQYMRRVI--QKKAKFDIMDLNCLKLAPK-T-FIPALFGHASEDKFIRARHSDLIFNAYA-------- 251 (486)
Q Consensus 184 ~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~-i-~~PvLii~G~~D~~vp~~~~~~l~~~l~-------- 251 (486)
.|.+. .++-...- .......+..+.+.+.+.. . =.-+||..+..|..|.+-++.++.+.+.
T Consensus 595 ---lplt~----sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~ 667 (712)
T KOG2237|consen 595 ---LPLTT----SDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLK 667 (712)
T ss_pred ---cccch----hhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchh
Confidence 01000 00000000 0000011111112111111 1 1358889999988887776666655543
Q ss_pred --CCcEEEEeC-CCCCCCChH----HHHHHHHHHHHHhcC
Q 011425 252 --GDKNIIKFD-GDHNSSRPQ----FYYDSVSIFFYNVLH 284 (486)
Q Consensus 252 --~~~~l~~~~-ggH~~~~p~----~~~~~I~~FL~~~l~ 284 (486)
++.-+.+.. +||+.-.+. +-......||.+.+.
T Consensus 668 q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 668 QTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred cCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhc
Confidence 122333333 499976331 222334567776654
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.1e-07 Score=109.23 Aligned_cols=205 Identities=11% Similarity=0.030 Sum_probs=115.9
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH-HHHHHHhcCCCCcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~i~LvGhS 144 (486)
.+.|+++||++++...|..++..|.. ++.|++++++|+|..... .. .++++.+ +++.+.......+++++|||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~--~~---~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQT--AT---SLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCCC--CC---CHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 47899999999999999999988865 699999999999865321 11 2333332 23334333234689999999
Q ss_pred chHHHHHHHHhc---CCC-ccEEEEcCCccCHHH-------------HHHHHH---HHHhhhC-CchhHHHHHHHHHHHH
Q 011425 145 MGAVTSLLYGAE---DPS-IAGMVLDSAFSDLFD-------------LMLELV---DVYKIRL-PKFTVKMAVQYMRRVI 203 (486)
Q Consensus 145 mGG~lAl~~A~~---~p~-v~~lVl~sp~~~~~~-------------~~~~~~---~~~~~~~-p~~~~~~~~~~~~~~~ 203 (486)
|||.++..+|.+ .+. +..++++.+...... ...... ....... ..... .....+...+
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1220 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLST-ELFTTIEGNY 1220 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccH-HHHHHHHHHH
Confidence 999999999885 344 888888765432100 000000 0000000 00000 0000011111
Q ss_pred hhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCCChHHHHHHHHHHHHHhc
Q 011425 204 QKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 204 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~~p~~~~~~I~~FL~~~l 283 (486)
..... .........+.+|++++.|..|............+.. +...+..++|+|+.+........+..+|.+.+
T Consensus 1221 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~g~H~~~~~~~~~~~~~~~l~~~l 1294 (1296)
T PRK10252 1221 ADAVR-----LLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQDCAHVDIISPEAFEKIGPILRATL 1294 (1296)
T ss_pred HHHHH-----HHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECCCCHHHHCCcHHHHHHHHHHHHHh
Confidence 00000 0001123456789999999988765544333333333 56677888999987633334466666666544
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=85.49 Aligned_cols=176 Identities=18% Similarity=0.232 Sum_probs=112.5
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCC--CC----------CCCCCcch---H----HHHHHHH
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD--GD----------YVSLGWHE---K----DDLKVVV 126 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~--~~----------~~~~~~~~---~----~Dl~~~i 126 (486)
..+|||+||.+.+...|..++..+.-.+...+++..|-.-.+. +. .......+ . +.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 3589999999999999988888877777888888655321110 00 00000111 2 2233333
Q ss_pred HHHHhc-CCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHh
Q 011425 127 SYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQ 204 (486)
Q Consensus 127 ~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 204 (486)
++-.+. ....+|++-|+||||.+++..+..++. +.+++..+++...... .++...
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~----------~~~~~~------------- 139 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI----------GLPGWL------------- 139 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------hccCCc-------------
Confidence 332222 123789999999999999999999976 7888776666541110 001000
Q ss_pred hhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCCChHHHHHHHHHHHH
Q 011425 205 KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 205 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~ 280 (486)
... + .+|++..||+.|++||........+.+. ..+++..|+| +|... .+-.+.+..|+.
T Consensus 140 -------------~~~-~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~--~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 140 -------------PGV-N-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS--PQELDDLKSWIK 202 (206)
T ss_pred -------------ccc-C-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc--HHHHHHHHHHHH
Confidence 000 1 5799999999999999986666555543 4477888889 99865 344567778887
Q ss_pred H
Q 011425 281 N 281 (486)
Q Consensus 281 ~ 281 (486)
+
T Consensus 203 ~ 203 (206)
T KOG2112|consen 203 T 203 (206)
T ss_pred H
Confidence 6
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.3e-07 Score=80.93 Aligned_cols=169 Identities=14% Similarity=0.098 Sum_probs=99.6
Q ss_pred cEEEEeCCCCCChh-hHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcc
Q 011425 67 PCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (486)
Q Consensus 67 p~VV~lHG~gg~~~-~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSm 145 (486)
+.+|++||++++.. .|+...+.-.. .+-.+++.. ... -..+|..+.++...... .++++||+||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~~----w~~------P~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQDD----WEA------PVLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccCC----CCC------CCHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 57899999987753 34443322111 122333320 000 11345444443333322 35699999999
Q ss_pred hHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCC
Q 011425 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF 224 (486)
Q Consensus 146 GG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 224 (486)
|+.+++.++..... |+|+++++|+.--...... .....++... ...+.
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~------------------------------~~~~tf~~~p-~~~lp 117 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRP------------------------------KHLMTFDPIP-REPLP 117 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCccccccch------------------------------hhccccCCCc-cccCC
Confidence 99999999988665 9999999988531110000 0000001111 11334
Q ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC-----ChHHHHHHHHHHHHH
Q 011425 225 IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS-----RPQFYYDSVSIFFYN 281 (486)
Q Consensus 225 ~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~-----~p~~~~~~I~~FL~~ 281 (486)
-|.++++..+|++++++.+..+++..+.. .+..-++||+.. .-.+....+.+|+.+
T Consensus 118 fps~vvaSrnDp~~~~~~a~~~a~~wgs~-lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 118 FPSVVVASRNDPYVSYEHAEDLANAWGSA-LVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CceeEEEecCCCCCCHHHHHHHHHhccHh-heecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 69999999999999999999999998653 233334599854 234555566666544
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=6.3e-07 Score=88.15 Aligned_cols=119 Identities=16% Similarity=0.215 Sum_probs=96.2
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccC---------CeEEEEEcCCCCCCCCCCCCCCC
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS---------NITLFTLDFSGSGLSDGDYVSLG 115 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~---------Gy~Vv~~D~rG~G~S~~~~~~~~ 115 (486)
..|.+|++.+..|...+......+|+++||+.|+...|..++..|..- -|.||++.+||+|-|++.... +
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~-G 209 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT-G 209 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC-C
Confidence 479999999888875444455568899999999999999988887653 388999999999999865432 3
Q ss_pred cchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEE
Q 011425 116 WHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVL 165 (486)
Q Consensus 116 ~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl 165 (486)
+. +..++.++.-|.-+.+.++++|-|--||..++..+|..+|+ |.|+=+
T Consensus 210 Fn-~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 210 FN-AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred cc-HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 22 45667777777777788999999999999999999999998 777654
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.5e-06 Score=80.76 Aligned_cols=237 Identities=12% Similarity=0.076 Sum_probs=143.3
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-HHHH-----HHHhccCCeEEEEEcCCCCCCCCCC-
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEA-----AVILLPSNITLFTLDFSGSGLSDGD- 110 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~~~~-----~~~L~~~Gy~Vv~~D~rG~G~S~~~- 110 (486)
++..+.+..| .++..++-- .++++|+||-.|..|-+... |+.+ +..+..+ |.|+-+|.||+-.....
T Consensus 23 ~e~~V~T~~G-~v~V~V~Gd----~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~ 96 (326)
T KOG2931|consen 23 QEHDVETAHG-VVHVTVYGD----PKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSF 96 (326)
T ss_pred eeeeeccccc-cEEEEEecC----CCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccC
Confidence 3444555555 455555521 12368999999999977555 5543 3445565 99999999998654332
Q ss_pred CCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhh----
Q 011425 111 YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKI---- 185 (486)
Q Consensus 111 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~---- 185 (486)
+..+.+-..+++++.+-.+.+..+.+.|+-+|--.|+++..++|..+|+ |-|+||+++.......+......+..
T Consensus 97 p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~ 176 (326)
T KOG2931|consen 97 PEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLY 176 (326)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHH
Confidence 2233344577888888777777788999999999999999999999998 99999998766543332222111110
Q ss_pred --hCCchh----------------HHHHHHHHHHHHhhhhcc---------cccccchhhh----CCCCCCCEEEEEeCC
Q 011425 186 --RLPKFT----------------VKMAVQYMRRVIQKKAKF---------DIMDLNCLKL----APKTFIPALFGHASE 234 (486)
Q Consensus 186 --~~p~~~----------------~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~----l~~i~~PvLii~G~~ 234 (486)
...... ...+.+..+..+...... .....|.... ...++||+|++.|..
T Consensus 177 ~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~ 256 (326)
T KOG2931|consen 177 YYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDN 256 (326)
T ss_pred hhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCC
Confidence 000000 011112222222211110 0001111111 125679999999999
Q ss_pred CCCCCHHHHHHHHHHcC-CCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 235 DKFIRARHSDLIFNAYA-GDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 235 D~~vp~~~~~~l~~~l~-~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
-+.+ +.+......+. ....++.+.+ |-... .|..+.+.+.=|+.-.
T Consensus 257 Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 257 SPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred Cchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 8875 35566666664 3455666554 54433 7888888888888653
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.7e-07 Score=85.30 Aligned_cols=221 Identities=17% Similarity=0.188 Sum_probs=121.6
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH---HHHHhccCCeEEEEEcCCCCCCCC-CCCCCC------
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSD-GDYVSL------ 114 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~S~-~~~~~~------ 114 (486)
.-+..+..-+|+|...+.+.+.|++.++.|+..+.+.+.. +.+...++|+.|+.+|-.-.|..- ++...+
T Consensus 23 tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 23 TLKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred ccccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCc
Confidence 3466788889999988888889999999999988777643 344556779999999975443221 111110
Q ss_pred C---------cch-HHHHHHHHHHHHhcC-------CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHH
Q 011425 115 G---------WHE-KDDLKVVVSYLRGNK-------QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (486)
Q Consensus 115 ~---------~~~-~~Dl~~~i~~l~~~~-------~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~ 176 (486)
+ |.. .....-+++.|-+.. +..++.|.||||||.-|+..+.++|. .+.+-..+|..++....
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp 182 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP 182 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc
Confidence 0 100 122222333332221 22579999999999999999998887 56665555555432211
Q ss_pred HHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHH-HHHHHHHHcC----
Q 011425 177 LELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAYA---- 251 (486)
Q Consensus 177 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~l~---- 251 (486)
... +.+..++..--.....++. ...+...+....-+||=.|..|.+..-+ --..+.++..
T Consensus 183 WGq-------------KAf~gYLG~~ka~W~~yDa--t~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~ 247 (283)
T KOG3101|consen 183 WGQ-------------KAFTGYLGDNKAQWEAYDA--THLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQ 247 (283)
T ss_pred chH-------------HHhhcccCCChHHHhhcch--HHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhcccc
Confidence 100 0111111100000001110 0122344455567999999999987622 1122333333
Q ss_pred CCcEEEEeCC-CCCCCChHHHHHHHHHHHH
Q 011425 252 GDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 252 ~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~ 280 (486)
....+...+| +|....-..|...-.++-.
T Consensus 248 ~~v~~r~~~gyDHSYyfIaTFv~dHi~hHA 277 (283)
T KOG3101|consen 248 APVVFRLQEGYDHSYYFIATFVADHIEHHA 277 (283)
T ss_pred ccEEEEeecCCCcceeeehhhhHHHHHHHH
Confidence 2345556677 8976543344433333333
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.6e-07 Score=90.26 Aligned_cols=108 Identities=16% Similarity=0.228 Sum_probs=78.0
Q ss_pred CCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCC---------CCCCCCC-------------c----
Q 011425 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD---------GDYVSLG-------------W---- 116 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~---------~~~~~~~-------------~---- 116 (486)
+.+.|+|||-||+++++..|..+.-.|+++||.|.++++|.+--.- ..+.... +
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 5678999999999999999999999999999999999999653221 0000000 0
Q ss_pred ----chHHHHHHHHHHHHhc-----------------------CCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCc
Q 011425 117 ----HEKDDLKVVVSYLRGN-----------------------KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (486)
Q Consensus 117 ----~~~~Dl~~~i~~l~~~-----------------------~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~ 169 (486)
+.+..+..++.-|++. ....++.|+|||+||.+++...+.+.++++.|+..++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~W 274 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeee
Confidence 0133344444444332 1125789999999999999999988889999987766
Q ss_pred c
Q 011425 170 S 170 (486)
Q Consensus 170 ~ 170 (486)
+
T Consensus 275 M 275 (399)
T KOG3847|consen 275 M 275 (399)
T ss_pred e
Confidence 5
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=6e-06 Score=87.06 Aligned_cols=123 Identities=15% Similarity=0.206 Sum_probs=83.9
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHH------------------HhccCCeEEEEEcCC-CCCCC
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV------------------ILLPSNITLFTLDFS-GSGLS 107 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~------------------~L~~~Gy~Vv~~D~r-G~G~S 107 (486)
+..+.++.+.... .....|+||+++|+.|++..+..+.+ .|.+ -..++.+|.| |+|.|
T Consensus 60 ~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S 136 (462)
T PTZ00472 60 DKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFS 136 (462)
T ss_pred CceEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcc
Confidence 6788888887653 34567999999999998765532210 1222 3678999975 88888
Q ss_pred CCCCCCCC---cchHHHHHHHHHHHHhcCC---CCcEEEEEEcchHHHHHHHHhcC---------CC--ccEEEEcCCcc
Q 011425 108 DGDYVSLG---WHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAED---------PS--IAGMVLDSAFS 170 (486)
Q Consensus 108 ~~~~~~~~---~~~~~Dl~~~i~~l~~~~~---~~~i~LvGhSmGG~lAl~~A~~~---------p~--v~~lVl~sp~~ 170 (486)
........ ...++|+..+++.+.+..+ ..+++|+|+||||..+..+|..- .. ++|+++.+|..
T Consensus 137 ~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 137 YADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 65432221 1236777777775554433 37999999999999987777651 12 79999988876
Q ss_pred CH
Q 011425 171 DL 172 (486)
Q Consensus 171 ~~ 172 (486)
+.
T Consensus 217 dp 218 (462)
T PTZ00472 217 DP 218 (462)
T ss_pred Ch
Confidence 54
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.4e-06 Score=88.14 Aligned_cols=155 Identities=13% Similarity=0.126 Sum_probs=113.2
Q ss_pred CCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcC-CccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcc-cc
Q 011425 134 QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDS-AFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKF-DI 211 (486)
Q Consensus 134 ~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~s-p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~ 211 (486)
.+++++|.|.|-=|..++..|+.+++|+++|.+. ...+....+.+....++...+.-.......-+...+...... -.
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~ 249 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLM 249 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHH
Confidence 3589999999999999999999999999988643 455777777777776662332211111111111111111111 11
Q ss_pred cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcCCCCCC
Q 011425 212 MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLHPPQIP 289 (486)
Q Consensus 212 ~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~~~~~~ 289 (486)
.-.|+..+..++++|-++|.|..|++..+....-++..+++.+.+.++|+ +|.... ..+.+.+..|+...+.....|
T Consensus 250 ~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~-~~~~~~l~~f~~~~~~~~~lP 327 (367)
T PF10142_consen 250 QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG-SDVVQSLRAFYNRIQNGRPLP 327 (367)
T ss_pred HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch-HHHHHHHHHHHHHHHcCCCCC
Confidence 12367777888999999999999999999999999999999999999998 999876 778889999999988766555
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.9e-05 Score=77.59 Aligned_cols=202 Identities=14% Similarity=0.105 Sum_probs=124.5
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh---hHHHHHHHhccCCeEEEEEcCCCC--CCCC-----
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSGS--GLSD----- 108 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~---~~~~~~~~L~~~Gy~Vv~~D~rG~--G~S~----- 108 (486)
++..-..++..+.+ +|.|.. .+....+||++||.+.+.. ....+-..|.+.|++++.+.+|.- ....
T Consensus 63 e~~~L~~~~~~fla-L~~~~~--~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~ 139 (310)
T PF12048_consen 63 EVQWLQAGEERFLA-LWRPAN--SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATE 139 (310)
T ss_pred hcEEeecCCEEEEE-EEeccc--CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCC
Confidence 33333334444443 677763 4466789999999998754 345566788999999999999871 1000
Q ss_pred -------C--CCCCC----------------Cc--chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC--
Q 011425 109 -------G--DYVSL----------------GW--HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-- 159 (486)
Q Consensus 109 -------~--~~~~~----------------~~--~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-- 159 (486)
+ ..... .+ ....-+.+++.++.++ +..+++|+||..|++.++.|.+..+.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~~~~~ 218 (310)
T PF12048_consen 140 AEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEKPPPM 218 (310)
T ss_pred CCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcCCCcc
Confidence 0 00000 00 0134566777777766 45679999999999999999999876
Q ss_pred ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCC
Q 011425 160 IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIR 239 (486)
Q Consensus 160 v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp 239 (486)
+.++|++++.......-. .....+..+++|+|=|++.....+
T Consensus 219 ~daLV~I~a~~p~~~~n~-------------------------------------~l~~~la~l~iPvLDi~~~~~~~~- 260 (310)
T PF12048_consen 219 PDALVLINAYWPQPDRNP-------------------------------------ALAEQLAQLKIPVLDIYSADNPAS- 260 (310)
T ss_pred cCeEEEEeCCCCcchhhh-------------------------------------hHHHHhhccCCCEEEEecCCChHH-
Confidence 899999998865322100 122445578899999998873222
Q ss_pred HHHHHH---HHHHcC-CCcEEEEeCC-CCCCC-ChHHHHHHHHHHHHHh
Q 011425 240 ARHSDL---IFNAYA-GDKNIIKFDG-DHNSS-RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 240 ~~~~~~---l~~~l~-~~~~l~~~~g-gH~~~-~p~~~~~~I~~FL~~~ 282 (486)
...+.. +..+.. ....-+.+.+ .|... ..+.+.+.|..||.++
T Consensus 261 ~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 261 QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 222211 111111 1222333344 55444 3444899999999864
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.6e-06 Score=84.96 Aligned_cols=233 Identities=21% Similarity=0.188 Sum_probs=128.4
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC----C----cc--
Q 011425 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL----G----WH-- 117 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~----~----~~-- 117 (486)
..+.+.++.|.........|.+++.||+++........+..++..++.++..+...+|.+....... . +.
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 110 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAA 110 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchh
Confidence 6677888888653333678999999999998887666778888888888888763333332111110 0 00
Q ss_pred -hHHHHHHHH--HHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC---CccEEEEcCCccCH----H------HHHHHHHH
Q 011425 118 -EKDDLKVVV--SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP---SIAGMVLDSAFSDL----F------DLMLELVD 181 (486)
Q Consensus 118 -~~~Dl~~~i--~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p---~v~~lVl~sp~~~~----~------~~~~~~~~ 181 (486)
.......++ ++.......++....|+++|+..+..++...+ ....++........ . ........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~ 190 (299)
T COG1073 111 VLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELID 190 (299)
T ss_pred heeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhh
Confidence 000000000 00111111268889999999988888887775 22222222221110 0 01111111
Q ss_pred HHhhhCCchhH-HHHHHHHHHHHhhhhcccccccchhhhCCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHcCC-CcEEEE
Q 011425 182 VYKIRLPKFTV-KMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIK 258 (486)
Q Consensus 182 ~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~l~~ 258 (486)
.+......... .....+.. .... ...+...+....+..+. +|+|++||.+|.+||...+..++..... .....+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~ 267 (299)
T COG1073 191 YLITPGGFAPLPAPEAPLDT--LPLR-AVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLF 267 (299)
T ss_pred hhccCCCCCCCCcccccccc--cccc-hhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEE
Confidence 11110000000 00000000 0000 00122234444555565 7999999999999999999999998877 566666
Q ss_pred eCC-CCCCC---Ch--HHHHHHHHHHHHHhc
Q 011425 259 FDG-DHNSS---RP--QFYYDSVSIFFYNVL 283 (486)
Q Consensus 259 ~~g-gH~~~---~p--~~~~~~I~~FL~~~l 283 (486)
+++ +|... .+ .+....+.+|+.+.+
T Consensus 268 ~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 268 VPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred ecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 665 89866 23 278889999998765
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.9e-06 Score=79.69 Aligned_cols=200 Identities=20% Similarity=0.224 Sum_probs=120.6
Q ss_pred cEEEEeCCCCCChhhHHHHHHHhccCC-----eEEEEEcCCCCCCCCCCCCC---------------CC-cchHHHHHHH
Q 011425 67 PCVVYCHGNSGCRADANEAAVILLPSN-----ITLFTLDFSGSGLSDGDYVS---------------LG-WHEKDDLKVV 125 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~~~~~L~~~G-----y~Vv~~D~rG~G~S~~~~~~---------------~~-~~~~~Dl~~~ 125 (486)
-+.||+||.+|+...+..++..|...+ --++.+|--|.=...|.... .+ .....-+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 356899999999999999998887764 34666776663111111100 00 1113457888
Q ss_pred HHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC------CCccEEEEcCCccCHHHHH-HHHHHHHhhhCCchhHHHHHHH
Q 011425 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFDLM-LELVDVYKIRLPKFTVKMAVQY 198 (486)
Q Consensus 126 i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~------p~v~~lVl~sp~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~ 198 (486)
+.+|.+++++..+-++||||||.....|+..+ |.+..+|.+++..+...+. .+........-|...-....++
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~~y 205 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPYYDY 205 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHHHHH
Confidence 99999999999999999999999999998874 4588888887766511100 0000000000111000011111
Q ss_pred HHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCC------CCCCHHHHHHHHHHcCCC-cEEE--EeCC---CCCCC
Q 011425 199 MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASED------KFIRARHSDLIFNAYAGD-KNII--KFDG---DHNSS 266 (486)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D------~~vp~~~~~~l~~~l~~~-~~l~--~~~g---gH~~~ 266 (486)
+... . ..+ .-++-+|+|.|+.| -.||...+..++..+.+. +.++ +++| .|..+
T Consensus 206 ~~~n-------------~-k~v-~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~l 270 (288)
T COG4814 206 IAKN-------------Y-KKV-SPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKL 270 (288)
T ss_pred HHhc-------------c-eeC-CCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhcc
Confidence 1110 0 000 12357999999865 567888888877777643 2222 4555 57755
Q ss_pred -ChHHHHHHHHHHHHH
Q 011425 267 -RPQFYYDSVSIFFYN 281 (486)
Q Consensus 267 -~p~~~~~~I~~FL~~ 281 (486)
+...+...+..||-+
T Consensus 271 hen~~v~~yv~~FLw~ 286 (288)
T COG4814 271 HENPTVAKYVKNFLWE 286 (288)
T ss_pred CCChhHHHHHHHHhhc
Confidence 556788888888854
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.5e-06 Score=90.40 Aligned_cols=93 Identities=12% Similarity=0.019 Sum_probs=74.2
Q ss_pred CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc
Q 011425 77 GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 77 g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
.....|..+++.|.+.||.+ ..|++|+|.+-...... ....+++...|+.+.+..+..+++|+||||||.+++.++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~-~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRL-PETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccH-HHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 44577888999999999855 88999999886543211 12367888888888877677899999999999999999988
Q ss_pred CCC-----ccEEEEcCCccC
Q 011425 157 DPS-----IAGMVLDSAFSD 171 (486)
Q Consensus 157 ~p~-----v~~lVl~sp~~~ 171 (486)
+|+ |+.+|+++++..
T Consensus 183 ~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred CCHhHHhHhccEEEECCCCC
Confidence 775 889998887654
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.36 E-value=5e-06 Score=77.03 Aligned_cols=87 Identities=16% Similarity=0.085 Sum_probs=60.1
Q ss_pred CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHH-HHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHh
Q 011425 77 GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD-LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 77 g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~D-l~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~ 155 (486)
+....|..+...+.. ++.|++++++|++.+..... . .++ +...++.+.......+++++|||+||.++..++.
T Consensus 10 ~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~--~---~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 10 SGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLPA--S---ADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCCC--C---HHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 566778888888876 58999999999986543221 1 222 2334444554444578999999999999988887
Q ss_pred cC---CC-ccEEEEcCCc
Q 011425 156 ED---PS-IAGMVLDSAF 169 (486)
Q Consensus 156 ~~---p~-v~~lVl~sp~ 169 (486)
.. +. +.+++++.+.
T Consensus 84 ~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 84 RLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHhCCCCCcEEEEEccC
Confidence 53 22 7888876543
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.3e-07 Score=87.50 Aligned_cols=90 Identities=17% Similarity=0.269 Sum_probs=58.2
Q ss_pred cEEEEeCCCCC-ChhhHHHHHHHhccCCeE---EEEEcCCCCCCCCCCC-CCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 011425 67 PCVVYCHGNSG-CRADANEAAVILLPSNIT---LFTLDFSGSGLSDGDY-VSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 67 p~VV~lHG~gg-~~~~~~~~~~~L~~~Gy~---Vv~~D~rG~G~S~~~~-~~~~~~~~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
.+|||+||.++ ....|..++..|.++||. |++++|-......... .......+..+++.|+.+++.-+. +|-||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 47999999998 567789999999999999 7999994333211100 000112256788888888887777 99999
Q ss_pred EEcchHHHHHHHHhcC
Q 011425 142 GRSMGAVTSLLYGAED 157 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~ 157 (486)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999999887643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.8e-06 Score=92.14 Aligned_cols=119 Identities=16% Similarity=0.227 Sum_probs=78.2
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhHHHHHHHhccC--CeEEEEEcCC-C---CCCCCCCCCCCCcchH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADANEAAVILLPS--NITLFTLDFS-G---SGLSDGDYVSLGWHEK 119 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~~~~~~~L~~~--Gy~Vv~~D~r-G---~G~S~~~~~~~~~~~~ 119 (486)
-|...+|.|.......+.|+||++||++- +...+ ....|+.. ++.|+.++|| | +........ .+-.-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~-~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIEL-PGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCC-CcchhH
Confidence 36666888975333467899999999752 22221 12233332 4999999999 3 322221111 111226
Q ss_pred HHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhcCC--C-ccEEEEcCCcc
Q 011425 120 DDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFS 170 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~~p--~-v~~lVl~sp~~ 170 (486)
.|+..+++|+++.. +.++|.|+|+|.||.++..++.... . ++++|+.++..
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 89999999998862 2379999999999999988776532 2 78888887654
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.4e-05 Score=80.54 Aligned_cols=107 Identities=21% Similarity=0.255 Sum_probs=72.2
Q ss_pred CCCcEEEEeCCCCCChhhH----HH--HHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCc
Q 011425 64 TPLPCVVYCHGNSGCRADA----NE--AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSR 137 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~----~~--~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 137 (486)
...|+||++||+|-..... .. ....+.+ ...++++||.-...-. .-.... ..+.++.++.++|.+..+..+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~-~~~~yP-tQL~qlv~~Y~~Lv~~~G~~n 196 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDE-HGHKYP-TQLRQLVATYDYLVESEGNKN 196 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEecccccccc-CCCcCc-hHHHHHHHHHHHHHhccCCCe
Confidence 3469999999998432221 11 1122334 5699999997433000 011111 336888999999996657799
Q ss_pred EEEEEEcchHHHHHHHHhcC----C--CccEEEEcCCccCHH
Q 011425 138 IGLWGRSMGAVTSLLYGAED----P--SIAGMVLDSAFSDLF 173 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~----p--~v~~lVl~sp~~~~~ 173 (486)
|+|+|-|.||.+++.++... + -.+.+|+++|+..+.
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999998776542 1 179999999998764
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.5e-06 Score=88.46 Aligned_cols=159 Identities=18% Similarity=0.148 Sum_probs=101.2
Q ss_pred CCcEEEEeCCCC--CChhhHHH-HHHHh--ccCCeEEEEEcCCCC-CCCCCCCCCCCc-chHHHHHHHHH----HHHhcC
Q 011425 65 PLPCVVYCHGNS--GCRADANE-AAVIL--LPSNITLFTLDFSGS-GLSDGDYVSLGW-HEKDDLKVVVS----YLRGNK 133 (486)
Q Consensus 65 ~~p~VV~lHG~g--g~~~~~~~-~~~~L--~~~Gy~Vv~~D~rG~-G~S~~~~~~~~~-~~~~Dl~~~i~----~l~~~~ 133 (486)
..|++|++||.+ ....+|.. +...| ..+-..|..+|++.- |. ... +.++.+..+.. .+...+
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 468999999997 22222222 22222 223356677787632 21 111 11222333333 222334
Q ss_pred CCCcEEEEEEcchHHHHHHHHhcCCC--ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccc
Q 011425 134 QTSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (486)
Q Consensus 134 ~~~~i~LvGhSmGG~lAl~~A~~~p~--v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 211 (486)
...+|+|+|+|||+.++..+...+.+ |+++|.++-+.+..+- +. .
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg------------pr--------------------g- 294 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG------------PR--------------------G- 294 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc------------cc--------------------C-
Confidence 45799999999999888888777665 8999987755431110 00 0
Q ss_pred cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 011425 212 MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 212 ~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~ 266 (486)
..-+.+-.++.|+||+.|..|..+++...+++.+++....+++++++ +|.+-
T Consensus 295 ---irDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 295 ---IRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMA 347 (784)
T ss_pred ---CcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCcccc
Confidence 00122335678999999999999999999999999998889999998 89754
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.4e-06 Score=81.40 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=78.7
Q ss_pred cEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcch
Q 011425 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmG 146 (486)
|+|.++||.+|....|..++..|... ..|+.++.||+|.-..... .. -+.+...++.|++.-+.++++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~--~l--~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFA--SL--DDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccccccC--CH--HHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 57899999999999999999999886 9999999999985322211 11 2345556677777766789999999999
Q ss_pred HHHHHHHHhcCC----CccEEEEcCCccC
Q 011425 147 AVTSLLYGAEDP----SIAGMVLDSAFSD 171 (486)
Q Consensus 147 G~lAl~~A~~~p----~v~~lVl~sp~~~ 171 (486)
|.+|..+|.+.- .|..++++.+...
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999987632 3889998887765
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00017 Score=67.69 Aligned_cols=107 Identities=20% Similarity=0.226 Sum_probs=74.7
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccC---CeEEEEEcCCCCCCCCCC---CCCC---C-cchHHHHHHHHHHHHh
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPS---NITLFTLDFSGSGLSDGD---YVSL---G-WHEKDDLKVVVSYLRG 131 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~---Gy~Vv~~D~rG~G~S~~~---~~~~---~-~~~~~Dl~~~i~~l~~ 131 (486)
....++.|+++.|..|....|.+++..|... .+.++.+-..||-.-+.. .... . +.-.+.+..-++++++
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 3467899999999999999998888776543 255888888888655411 1000 1 1113567777888888
Q ss_pred cCCC-CcEEEEEEcchHHHHHHHHhcCC-C--ccEEEEcCC
Q 011425 132 NKQT-SRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSA 168 (486)
Q Consensus 132 ~~~~-~~i~LvGhSmGG~lAl~~A~~~p-~--v~~lVl~sp 168 (486)
..+. .+++++|||.|+++.+.+..... . |..++++-|
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 7554 78999999999999999987432 2 555555433
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.4e-05 Score=74.98 Aligned_cols=109 Identities=18% Similarity=0.185 Sum_probs=73.4
Q ss_pred CCCcEEEEeCCCCCChhhH-HHHHHHhccCC--eEEEEEcCCCCCCCCCCCCCC--CcchHHHHHHHHHHHHhcCCCCcE
Q 011425 64 TPLPCVVYCHGNSGCRADA-NEAAVILLPSN--ITLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSRI 138 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~-~~~~~~L~~~G--y~Vv~~D~rG~G~S~~~~~~~--~~~~~~Dl~~~i~~l~~~~~~~~i 138 (486)
+.+.++||+||+..+-... ...++.....+ ..++.+.+|..|.-.+-.... .......+..++..|.+..+..+|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 5678999999999875543 22322222222 289999999877532211111 112256677788888777667999
Q ss_pred EEEEEcchHHHHHHHHhc----C--C----CccEEEEcCCccCH
Q 011425 139 GLWGRSMGAVTSLLYGAE----D--P----SIAGMVLDSAFSDL 172 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~----~--p----~v~~lVl~sp~~~~ 172 (486)
+|++||||+.+.+.+... . | .|..+|+.+|-.+.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 999999999999887654 1 1 27888998887764
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.4e-06 Score=86.72 Aligned_cols=116 Identities=23% Similarity=0.348 Sum_probs=80.0
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCC-eEEEEEcCCC--CCCCC--------CCCCCCC
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSN-ITLFTLDFSG--SGLSD--------GDYVSLG 115 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~G-y~Vv~~D~rG--~G~S~--------~~~~~~~ 115 (486)
|...+|.|. ....+.|+||||||++ |+......-...|+++| +.||.++||= .|.-. ......+
T Consensus 80 L~LNIwaP~--~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 80 LYLNIWAPE--VPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred eeEEeeccC--CCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 566688887 2345689999999995 33333333445788887 9999999982 12111 1111112
Q ss_pred cchHHHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhcCCC----ccEEEEcCCccC
Q 011425 116 WHEKDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFSD 171 (486)
Q Consensus 116 ~~~~~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~~p~----v~~lVl~sp~~~ 171 (486)
+.|...+++|++++. +.++|.|+|+|.||+.++.+++. |. +..+|+.|+...
T Consensus 158 ---l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 ---LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ---HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 689999999998863 23799999999999998877654 43 666777777654
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.2e-05 Score=72.44 Aligned_cols=202 Identities=16% Similarity=0.099 Sum_probs=111.0
Q ss_pred EEEeCCCCC-ChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcc
Q 011425 69 VVYCHGNSG-CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSM 145 (486)
Q Consensus 69 VV~lHG~gg-~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSm 145 (486)
+|++=|+.+ .......+.+...+.|+.++.+-.+-....... . .....+..+++.+.+.... .++.+-.+|.
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---K--RLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---c--chHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 344445544 445556677777778999999876632211111 0 1123344455555554333 2899999999
Q ss_pred hHHHHHHHHhc-----------CCCccEEEEcCCccCHHH--HHHHHHHHHhhhCCchh------HHH-HHHHHHHHHhh
Q 011425 146 GAVTSLLYGAE-----------DPSIAGMVLDSAFSDLFD--LMLELVDVYKIRLPKFT------VKM-AVQYMRRVIQK 205 (486)
Q Consensus 146 GG~lAl~~A~~-----------~p~v~~lVl~sp~~~~~~--~~~~~~~~~~~~~p~~~------~~~-~~~~~~~~~~~ 205 (486)
||...+..... .|.++|+|+.|++..... ....+... .+... ... ....+......
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAA----LPKSSPRWFVPLWPLLQFLLRLSIIS 152 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHH----cCccchhhHHHHHHHHHHHHHHHHHH
Confidence 88887665441 123899999988754322 12111111 12110 001 01111100000
Q ss_pred h--hcccc-c--ccchh--hhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCC---ChHHH
Q 011425 206 K--AKFDI-M--DLNCL--KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS---RPQFY 271 (486)
Q Consensus 206 ~--~~~~~-~--~~~~~--~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~---~p~~~ 271 (486)
. ..... . ..... .......+|.|++++..|.+++.+..+++.+... ..+....+++ .|... +|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y 232 (240)
T PF05705_consen 153 YFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRY 232 (240)
T ss_pred HHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHH
Confidence 0 00000 0 00001 1122345899999999999999998888776653 3466667776 66644 89999
Q ss_pred HHHHHHHH
Q 011425 272 YDSVSIFF 279 (486)
Q Consensus 272 ~~~I~~FL 279 (486)
++.+.+|+
T Consensus 233 ~~~v~~fw 240 (240)
T PF05705_consen 233 WRAVDEFW 240 (240)
T ss_pred HHHHHhhC
Confidence 99999885
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.2e-05 Score=75.01 Aligned_cols=133 Identities=14% Similarity=0.116 Sum_probs=81.2
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-HHHHHHHhccC----CeEEEEEcCCCCCCCCCCCCC
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAAVILLPS----NITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~~~~~~~L~~~----Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
++.+...-..+....+|+|.+.....+.|+++++||-.-.... ...+.+.|... ...+|.+|+----........
T Consensus 71 ~~~~~~~l~~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~ 150 (299)
T COG2382 71 EILYSSELLSERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHC 150 (299)
T ss_pred hhhhhhhhccceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcc
Confidence 3334333335566668889888777889999999986422111 12233444333 356777776421000001110
Q ss_pred CCcchHHHHHHHHHHHHhcCCC----CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~~----~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
...+...-+.+++=++++.++. ..-+|+|.|+||.+++..+..+|+ +..++..||...
T Consensus 151 n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 151 NEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred cHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 0001112244556677776654 567899999999999999999999 888888888764
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.12 E-value=2e-06 Score=86.50 Aligned_cols=107 Identities=20% Similarity=0.214 Sum_probs=64.5
Q ss_pred CCCCcEEEEeCCCCCCh--hhH-HHHHHHh-cc--CCeEEEEEcCCCCCCCCCCCCCCCc---chHHHHHHHHHHHHhcC
Q 011425 63 DTPLPCVVYCHGNSGCR--ADA-NEAAVIL-LP--SNITLFTLDFSGSGLSDGDYVSLGW---HEKDDLKVVVSYLRGNK 133 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~--~~~-~~~~~~L-~~--~Gy~Vv~~D~rG~G~S~~~~~~~~~---~~~~Dl~~~i~~l~~~~ 133 (486)
+..+|++|++||+.++. ..| ..+...+ .. .+++|+++|+...-. ..+..... .....+...|..|....
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~--~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS--NNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS--S-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc--ccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 35789999999999877 334 3455544 44 489999999953211 11100000 01234556666666432
Q ss_pred --CCCcEEEEEEcchHHHHHHHHhcCCC---ccEEEEcCCccC
Q 011425 134 --QTSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLDSAFSD 171 (486)
Q Consensus 134 --~~~~i~LvGhSmGG~lAl~~A~~~p~---v~~lVl~sp~~~ 171 (486)
..++|+|+|||+||.+|-.++..... |..|+.+.|...
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred CCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 34899999999999999988877554 888998888754
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.3e-06 Score=89.11 Aligned_cols=120 Identities=20% Similarity=0.304 Sum_probs=75.0
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCC---CCh-hhHHHHHHHhccCCeEEEEEcCC----CCCCCCCCCCCCCcchHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCR-ADANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDD 121 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~-~~~~~~~~~L~~~Gy~Vv~~D~r----G~G~S~~~~~~~~~~~~~D 121 (486)
|...+|.|.......+.|++||+||++ |+. .........++..++.||.++|| |+-.+.......+-.-+.|
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~D 188 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLD 188 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhh
Confidence 677799998755545789999999986 222 12222334456679999999999 3322221111111122789
Q ss_pred HHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhcCC--C-ccEEEEcCCc
Q 011425 122 LKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAF 169 (486)
Q Consensus 122 l~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~p--~-v~~lVl~sp~ 169 (486)
...+++|+++.... ++|.|+|+|.||..+...+.... . +.++|+.|+.
T Consensus 189 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 189 QRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 99999999987432 78999999999998877665522 2 8999998873
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00024 Score=65.60 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=77.5
Q ss_pred CCCcEEEEeCCCCCCh---hhHHHHHHHhccCCeEEEEEcCC----CCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCC
Q 011425 64 TPLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS 136 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~---~~~~~~~~~L~~~Gy~Vv~~D~r----G~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 136 (486)
.....|||+.|++..- ....++..+|.+.+|.++-+-++ |+|.+.-+ ++++|+..+++++.......
T Consensus 34 v~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk------~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 34 VESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK------DDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred ceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc------ccHHHHHHHHHHhhccCccc
Confidence 3456789999998652 34566788899999999999876 34433311 34799999999886553346
Q ss_pred cEEEEEEcchHHHHHHHHhc--CCC-ccEEEEcCCccCHH
Q 011425 137 RIGLWGRSMGAVTSLLYGAE--DPS-IAGMVLDSAFSDLF 173 (486)
Q Consensus 137 ~i~LvGhSmGG~lAl~~A~~--~p~-v~~lVl~sp~~~~~ 173 (486)
.|+|+|||-|+.-.+.|+.. .++ |.+.|+.+|..+..
T Consensus 108 ~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999999999999843 234 88889988887643
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.5e-05 Score=76.76 Aligned_cols=212 Identities=14% Similarity=0.096 Sum_probs=113.0
Q ss_pred CCCCcEEEEeCCCCCChhhHH---HHHHHhccCCeEEEEEcCC--CCCCC----------CCCCCC----------CCcc
Q 011425 63 DTPLPCVVYCHGNSGCRADAN---EAAVILLPSNITLFTLDFS--GSGLS----------DGDYVS----------LGWH 117 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~---~~~~~L~~~Gy~Vv~~D~r--G~G~S----------~~~~~~----------~~~~ 117 (486)
+.+.|+++++||..++...+. .+-......|+.++++|-. +.+.. .+-+.. ..|+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 456899999999998753332 2334455568888887433 21111 100000 1111
Q ss_pred h--HHHHHHHHHHHHhcCCC----CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCch
Q 011425 118 E--KDDLKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKF 190 (486)
Q Consensus 118 ~--~~Dl~~~i~~l~~~~~~----~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~ 190 (486)
+ ..++.+ .+.+.... +...++||||||+-|+.+|+++|+ ++.+...+|............. . ..+.
T Consensus 131 tfl~~ELP~---~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~-~--~~~~- 203 (316)
T COG0627 131 TFLTQELPA---LWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLA-M--GDPW- 203 (316)
T ss_pred HHHHhhhhH---HHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccccccccccc-c--cccc-
Confidence 1 222222 22222221 278999999999999999999987 8888888887765422111100 0 0000
Q ss_pred hHHHHHHHHHHHHhhhhcccccccchhhhCCC--------------CCCCEEEEEeCCCCCCC-H-HHHHHHHHHcC---
Q 011425 191 TVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--------------TFIPALFGHASEDKFIR-A-RHSDLIFNAYA--- 251 (486)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------i~~PvLii~G~~D~~vp-~-~~~~~l~~~l~--- 251 (486)
.......++...........|+...+.+ ...++++-+|..|.+.. . ...+.+.+++.
T Consensus 204 ----g~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g 279 (316)
T COG0627 204 ----GGKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAG 279 (316)
T ss_pred ----cCccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcC
Confidence 0000011111111111111122211111 34577888999998875 1 12444444443
Q ss_pred CCcEEEEeC-CCCCCCChHHHHHHHHHHHHHhcCC
Q 011425 252 GDKNIIKFD-GDHNSSRPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 252 ~~~~l~~~~-ggH~~~~p~~~~~~I~~FL~~~l~~ 285 (486)
.+..+...+ |+|.......+.+....|+...+..
T Consensus 280 ~~~~~~~~~~G~Hsw~~w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 280 IPNGVRDQPGGDHSWYFWASQLADHLPWLAGALGL 314 (316)
T ss_pred CCceeeeCCCCCcCHHHHHHHHHHHHHHHHHHhcc
Confidence 556677774 4888766677788888888877653
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0001 Score=65.19 Aligned_cols=182 Identities=13% Similarity=0.074 Sum_probs=97.2
Q ss_pred EEEeCCCCCChhhHHHH--HHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcch
Q 011425 69 VVYCHGNSGCRADANEA--AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (486)
Q Consensus 69 VV~lHG~gg~~~~~~~~--~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmG 146 (486)
||++||+.++....... .+++... .|-.+.+....... ...+.+-++.+..........|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~p~l~h~----p~~a~~ele~~i~~~~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYSTPHLPHD----PQQALKELEKAVQELGDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeecCCCCCC----HHHHHHHHHHHHHHcCCCCceEEeecch
Confidence 89999999877665442 2333332 22222222222211 2333334444434334456899999999
Q ss_pred HHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCC
Q 011425 147 AVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP 226 (486)
Q Consensus 147 G~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 226 (486)
|+.|-+++..+. |++++ ++|...+.+.+......-.....+-..... ..-+.. -....+..++.|
T Consensus 70 GY~At~l~~~~G-irav~-~NPav~P~e~l~gylg~~en~ytg~~y~le----~~hI~~---------l~~~~~~~l~~p 134 (191)
T COG3150 70 GYYATWLGFLCG-IRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLE----SRHIAT---------LCVLQFRELNRP 134 (191)
T ss_pred HHHHHHHHHHhC-Chhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEee----hhhHHH---------HHHhhccccCCC
Confidence 999999998775 55544 567666655554443321100000000000 000000 011222333443
Q ss_pred -EEEEEeCC-CCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCCChHHHHHHHHHHHH
Q 011425 227 -ALFGHASE-DKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 227 -vLii~G~~-D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~~p~~~~~~I~~FL~ 280 (486)
.+++.... |.+...+.+.+.+..+ .+.++-+|+|-+..-+.+.+.|..|..
T Consensus 135 ~~~~lL~qtgDEvLDyr~a~a~y~~~---~~~V~dgg~H~F~~f~~~l~~i~aF~g 187 (191)
T COG3150 135 RCLVLLSQTGDEVLDYRQAVAYYHPC---YEIVWDGGDHKFKGFSRHLQRIKAFKG 187 (191)
T ss_pred cEEEeecccccHHHHHHHHHHHhhhh---hheeecCCCccccchHHhHHHHHHHhc
Confidence 34444444 9998877766666543 445554568988877788888888864
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00095 Score=69.19 Aligned_cols=77 Identities=17% Similarity=0.245 Sum_probs=48.1
Q ss_pred HHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH----HHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC
Q 011425 85 AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV----VVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS 159 (486)
Q Consensus 85 ~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~----~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~ 159 (486)
+...| ..|+.|+.+.+.- ...+ -++++|+.. .++.+....+. .+.+|+|.+.||..++.+|+.+|+
T Consensus 93 vG~AL-~~GHPvYFV~F~p----~P~p----gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 93 VGVAL-RAGHPVYFVGFFP----EPEP----GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HHHHH-HcCCCeEEEEecC----CCCC----CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 33344 4488888777641 1111 133455443 34444444332 589999999999999999999999
Q ss_pred -ccEEEEcCCcc
Q 011425 160 -IAGMVLDSAFS 170 (486)
Q Consensus 160 -v~~lVl~sp~~ 170 (486)
+.-+|+.+++.
T Consensus 164 ~~gplvlaGaPl 175 (581)
T PF11339_consen 164 LVGPLVLAGAPL 175 (581)
T ss_pred ccCceeecCCCc
Confidence 55566644433
|
Their function is unknown. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.78 E-value=5.9e-05 Score=71.53 Aligned_cols=88 Identities=17% Similarity=0.135 Sum_probs=47.0
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhcc--CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcC---CC--Cc
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLP--SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---QT--SR 137 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~--~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~---~~--~~ 137 (486)
+.-+|||+||+.|+..+|..+...+.. ..+.-..+.+.++...... ...+.. .-...+++++.+.. .. .+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~-T~~gI~--~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK-TFDGID--VCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc-cchhhH--HHHHHHHHHHHHhcccccccccc
Confidence 456899999999999988777666554 1121112222221111110 011111 11222233333221 22 58
Q ss_pred EEEEEEcchHHHHHHHHh
Q 011425 138 IGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~ 155 (486)
|.++||||||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999876554
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00034 Score=66.21 Aligned_cols=208 Identities=14% Similarity=0.123 Sum_probs=115.2
Q ss_pred CCCcEEEEeCCCCCChhhHH-HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC-cchHHH----HHHHHHHHHhc-----
Q 011425 64 TPLPCVVYCHGNSGCRADAN-EAAVILLPSNITLFTLDFSGSGLSDGDYVSLG-WHEKDD----LKVVVSYLRGN----- 132 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~-~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~-~~~~~D----l~~~i~~l~~~----- 132 (486)
+..++-|++-|-|.+...-. .+...+..+|+..+++.-|-+|.......-.. ...+.| -++.|+.....
T Consensus 111 K~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 111 KMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred CcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 44566677666665433222 34566778899999999999997653210000 000111 12233333322
Q ss_pred -CCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH----HHH---HHHHH---------HhhhCCchhHHH
Q 011425 133 -KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----LML---ELVDV---------YKIRLPKFTVKM 194 (486)
Q Consensus 133 -~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~----~~~---~~~~~---------~~~~~p~~~~~~ 194 (486)
.+.+++.|+|.||||.+|..+...++. |.-+-.+++...... .+. ..+.. +..+.|.-.+..
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~~ 270 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNPAQSYHL 270 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCchhhHHH
Confidence 345899999999999999999998876 433333322211110 000 00000 111111111100
Q ss_pred H------------HHHHHHHHhhhhcccccccchhhhCCCCCCC-----EEEEEeCCCCCCCHHHHHHHHHHcCCCcEEE
Q 011425 195 A------------VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP-----ALFGHASEDKFIRARHSDLIFNAYAGDKNII 257 (486)
Q Consensus 195 ~------------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-----vLii~G~~D~~vp~~~~~~l~~~l~~~~~l~ 257 (486)
. ..+++.++ +....+.+..+| ++++.+.+|..+|...+..+.+..++ +++.
T Consensus 271 ~~~~~srn~~~E~~~~Mr~vm-----------d~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr 338 (371)
T KOG1551|consen 271 LSKEQSRNSRKESLIFMRGVM-----------DECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPG-CEVR 338 (371)
T ss_pred HHHHhhhcchHHHHHHHHHHH-----------HhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCC-CEEE
Confidence 0 11111111 111222233333 57788999999999888888887755 6788
Q ss_pred EeCCCCCCC---ChHHHHHHHHHHHHHhc
Q 011425 258 KFDGDHNSS---RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 258 ~~~ggH~~~---~p~~~~~~I~~FL~~~l 283 (486)
+.+|||... ..+.|-++|.+-|++..
T Consensus 339 ~~egGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 339 YLEGGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EeecCceeeeehhchHHHHHHHHHHHhhh
Confidence 889999855 56788888988887754
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00041 Score=68.92 Aligned_cols=111 Identities=20% Similarity=0.183 Sum_probs=76.5
Q ss_pred CCCcEEEEeCCCCCChhh-HHHHHHHhccCC--eEEEEEcCCCCCCCCCCCCC--CCcchHHHHHHHHHHHHhcCCCCcE
Q 011425 64 TPLPCVVYCHGNSGCRAD-ANEAAVILLPSN--ITLFTLDFSGSGLSDGDYVS--LGWHEKDDLKVVVSYLRGNKQTSRI 138 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~-~~~~~~~L~~~G--y~Vv~~D~rG~G~S~~~~~~--~~~~~~~Dl~~~i~~l~~~~~~~~i 138 (486)
..+.++||+||+..+-.+ -...++.....| ...+.+-+|..|.--+-..+ ..-+...+++.++.+|.+..+..+|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 457899999999865333 344555554444 56778888865543211111 0112368899999999999888999
Q ss_pred EEEEEcchHHHHHHHHhc----CC-----CccEEEEcCCccCHHH
Q 011425 139 GLWGRSMGAVTSLLYGAE----DP-----SIAGMVLDSAFSDLFD 174 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~----~p-----~v~~lVl~sp~~~~~~ 174 (486)
+|++||||.++++..+.+ .. .|+-+|+.+|-.+..-
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 999999999999887654 11 2788888888776433
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00037 Score=73.21 Aligned_cols=106 Identities=19% Similarity=0.168 Sum_probs=67.3
Q ss_pred CcEEEEeCCCCCChhhH--HHHHHHhcc-CCeEEEEEcCCCCCCCCCCC--C--CCCc----chHHHHHHHHHHHHhcCC
Q 011425 66 LPCVVYCHGNSGCRADA--NEAAVILLP-SNITLFTLDFSGSGLSDGDY--V--SLGW----HEKDDLKVVVSYLRGNKQ 134 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~--~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~--~--~~~~----~~~~Dl~~~i~~l~~~~~ 134 (486)
.|++|++-|-+.-...+ ..+...|++ .|-.||++.+|.+|.|.... . ...+ +.++|++..+++++....
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 78888886655332222 123334444 38899999999999996321 1 1111 237899999999986542
Q ss_pred ---CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 135 ---TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 135 ---~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
..+++++|-|+||++|..+-.++|+ |.|.+.-|++..
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 2689999999999999999999999 888888887764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00012 Score=74.01 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=77.8
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeE---EEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNIT---LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~---Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
.-++|++||++.....|..+...+...|+. ++.+++++. ...... ....+.+.+.|+.+....+..++.++|
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~----~~~~~ql~~~V~~~l~~~ga~~v~Lig 133 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYSL----AVRGEQLFAYVDEVLAKTGAKKVNLIG 133 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCccc----cccHHHHHHHHHHHHhhcCCCceEEEe
Confidence 448999999988888888888888888887 888888855 111111 112455666666666665668999999
Q ss_pred EcchHHHHHHHHhcCC--C-ccEEEEcCCccCHH
Q 011425 143 RSMGAVTSLLYGAEDP--S-IAGMVLDSAFSDLF 173 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p--~-v~~lVl~sp~~~~~ 173 (486)
|||||.++..++...+ . |+.++.++++-...
T Consensus 134 HS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 134 HSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred ecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 9999999999999888 3 99999988876543
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00026 Score=66.21 Aligned_cols=165 Identities=14% Similarity=0.123 Sum_probs=88.7
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeE-EEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNIT-LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~-Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
..+|||+.|+|.+...+.++. ...++. ++++|||..-. |. + + ...+.|.|+|+|
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~--------------d~----~-~---~~y~~i~lvAWS 65 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDF--------------DF----D-L---SGYREIYLVAWS 65 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCccccc--------------cc----c-c---ccCceEEEEEEe
Confidence 579999999999887665543 123444 46889872110 11 1 1 135899999999
Q ss_pred chHHHHHHHHhcCCCccEEEEcCCccCH--------HHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcc------c
Q 011425 145 MGAVTSLLYGAEDPSIAGMVLDSAFSDL--------FDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKF------D 210 (486)
Q Consensus 145 mGG~lAl~~A~~~p~v~~lVl~sp~~~~--------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------~ 210 (486)
||-.+|..+....| ++..|.+++-.-+ ........ ..+.......+.+++....... .
T Consensus 66 mGVw~A~~~l~~~~-~~~aiAINGT~~Pid~~~GIpp~iF~~Tl-------~~l~ee~~~kF~rrmcg~~~~~~~f~~~~ 137 (213)
T PF04301_consen 66 MGVWAANRVLQGIP-FKRAIAINGTPYPIDDEYGIPPAIFAGTL-------ENLSEENLQKFNRRMCGDKELLEKFQSFP 137 (213)
T ss_pred HHHHHHHHHhccCC-cceeEEEECCCCCcCCCCCCCHHHHHHHH-------HhCCHHHHHHHHHHhcCCchhhHHhhcCC
Confidence 99999988876544 5555555543211 11111111 1111222222222222111100 0
Q ss_pred ccc--------cch-hhhCCCC-CCC----EEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC
Q 011425 211 IMD--------LNC-LKLAPKT-FIP----ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS 266 (486)
Q Consensus 211 ~~~--------~~~-~~~l~~i-~~P----vLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~ 266 (486)
... +.. ....... ..+ ...+.|.+|.++|++..+..++.. ..++.++++|+..
T Consensus 138 ~r~~~~elk~EL~~l~~~~~~~~~~~~~~wd~aiIg~~D~IFpp~nQ~~~W~~~---~~~~~~~~~Hy~F 204 (213)
T PF04301_consen 138 PRRSFEELKEELAALYEFIKKNPPADLFHWDKAIIGKKDRIFPPENQKRAWQGR---CTIVEIDAPHYPF 204 (213)
T ss_pred cCCCHHHHHHHHHHHHHHHhccCCCCCccccEEEEcCCCEEeCHHHHHHHHhCc---CcEEEecCCCcCc
Confidence 000 000 0000110 111 248899999999999999888743 3466778999865
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.003 Score=63.57 Aligned_cols=90 Identities=20% Similarity=0.173 Sum_probs=70.0
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
..-.-||..|-||-+..-......|.++|+.|+.+|-.-+--+...+. +...|+..+|++...+-+..++.|+|+|
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe----~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPE----QIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHH----HHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 455678888888877767778999999999999999754444443332 2278999999999988777999999999
Q ss_pred chHHHHHHHHhcCC
Q 011425 145 MGAVTSLLYGAEDP 158 (486)
Q Consensus 145 mGG~lAl~~A~~~p 158 (486)
+|+-+.-..-.+.|
T Consensus 335 fGADvlP~~~n~L~ 348 (456)
T COG3946 335 FGADVLPFAYNRLP 348 (456)
T ss_pred ccchhhHHHHHhCC
Confidence 99988766555544
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0024 Score=64.89 Aligned_cols=129 Identities=12% Similarity=0.064 Sum_probs=81.9
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-H-HHHHHHhccC-CeEEEEEcCCCCCCCCCC------
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-A-NEAAVILLPS-NITLFTLDFSGSGLSDGD------ 110 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~-~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~------ 110 (486)
|++--.+..+|.+.+.... ....+..|+++.|+|++... + ..+.+.+|+. +..|+.++|=|+|..+..
T Consensus 12 vELgikR~sKLEyri~ydd---~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~ 88 (403)
T PF11144_consen 12 VELGIKRESKLEYRISYDD---EKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYF 88 (403)
T ss_pred eeecccccceeeEEeecCC---CCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcC
Confidence 3333345567777775543 44567899999999998764 3 3455666664 556666777665533210
Q ss_pred ----------------C-----CC----------------------------------------CCcc-----hHHHHHH
Q 011425 111 ----------------Y-----VS----------------------------------------LGWH-----EKDDLKV 124 (486)
Q Consensus 111 ----------------~-----~~----------------------------------------~~~~-----~~~Dl~~ 124 (486)
. .. ..++ .+-|+..
T Consensus 89 ~~~D~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~IN 168 (403)
T PF11144_consen 89 DDIDKEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIIN 168 (403)
T ss_pred CHHHHHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHH
Confidence 0 00 0000 1345555
Q ss_pred HHHHHHhcCCC--C--cEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 125 VVSYLRGNKQT--S--RIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 125 ~i~~l~~~~~~--~--~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
++.++...... . +++++|+|.||++|.+.|.-.|. +.+++=.+++..
T Consensus 169 Al~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 169 ALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 66666555332 3 89999999999999999999998 788877666554
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00096 Score=65.99 Aligned_cols=156 Identities=17% Similarity=0.227 Sum_probs=103.4
Q ss_pred CCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCC-ccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccc
Q 011425 133 KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA-FSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (486)
Q Consensus 133 ~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 211 (486)
..+..++|-|.|--|..+++.|..+|+|.++|.... ..+....+.++...++..+|-.......+-+...+.......+
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL 310 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQL 310 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHH
Confidence 355889999999999999999999999888884321 2345556666666666555543332222222222211111111
Q ss_pred cc-cchhhh-----CCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 212 MD-LNCLKL-----APKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 212 ~~-~~~~~~-----l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
.+ .|+... ..++.+|-+|+.|..|++..+..+.-+++.+++.+.+.++|+ .|... +..+.+.+.-|+...-.
T Consensus 311 ~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~-n~~i~esl~~flnrfq~ 389 (507)
T COG4287 311 LEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI-NQFIKESLEPFLNRFQM 389 (507)
T ss_pred HHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh-HHHHHHHHHHHHHHHhc
Confidence 11 133333 367889999999999999999999999999999999999998 88865 23444556666666554
Q ss_pred CCCCC
Q 011425 285 PPQIP 289 (486)
Q Consensus 285 ~~~~~ 289 (486)
.+..|
T Consensus 390 ~~~LP 394 (507)
T COG4287 390 YPKLP 394 (507)
T ss_pred CCCCc
Confidence 44433
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0046 Score=56.90 Aligned_cols=107 Identities=11% Similarity=0.013 Sum_probs=68.0
Q ss_pred CCCcEEEEeCCCCCC-hhhH---------------HHHHHHhccCCeEEEEEcCCC---CCCCCCCCCCCCcchHHHHHH
Q 011425 64 TPLPCVVYCHGNSGC-RADA---------------NEAAVILLPSNITLFTLDFSG---SGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~-~~~~---------------~~~~~~L~~~Gy~Vv~~D~rG---~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+..++|++||-|-- +..| .+++......||.|++.+.-- +-.+...+.......++.+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 566799999998743 2223 234455556799999887531 111211221111122555555
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC---ccEEEEcCCcc
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLDSAFS 170 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~---v~~lVl~sp~~ 170 (486)
+...+........++++.||+||..++.+..+.|+ |.++.+...++
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 55555555456899999999999999999999986 77776654443
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.009 Score=57.46 Aligned_cols=130 Identities=16% Similarity=0.204 Sum_probs=71.4
Q ss_pred EEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCe-EEEEEcCCC---------CCC-CC
Q 011425 41 EIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNI-TLFTLDFSG---------SGL-SD 108 (486)
Q Consensus 41 ~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy-~Vv~~D~rG---------~G~-S~ 108 (486)
.+... .|..-++++..|...+.+...|+|.|+-|..-......-+...+.+.-. ..+.+.+.. ..+ .+
T Consensus 13 ~l~s~~~~~~yri~i~~P~~~~~~~~YpVlY~lDGn~vf~~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~~~r~~DyTp 92 (264)
T COG2819 13 DLKSANTGRKYRIFIATPKNYPKPGGYPVLYMLDGNAVFNALTEIMLRILADLPPPVIVGIGYETILVFDPNRRAYDYTP 92 (264)
T ss_pred eeeecCCCcEEEEEecCCCCCCCCCCCcEEEEecchhhhchHHHHhhhhhhcCCCceEEEeccccccccccccccccCCC
Confidence 34434 4566777788898776666678777777775433322222333333211 112222221 111 10
Q ss_pred CC-----------CCCC-Cc-c-hHHHHHH-HHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc
Q 011425 109 GD-----------YVSL-GW-H-EKDDLKV-VVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (486)
Q Consensus 109 ~~-----------~~~~-~~-~-~~~Dl~~-~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~ 170 (486)
.. +... +- . ..+.+.. +.-|+.+.+.. ++..|+|||+||.+++.....+|+ +...++++|..
T Consensus 93 ~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 93 PSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred CCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 00 0101 10 0 0222222 22344444433 679999999999999999999998 89999988875
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0082 Score=62.37 Aligned_cols=131 Identities=16% Similarity=0.246 Sum_probs=79.6
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHH----hc--------c------CCeEEEEEcCC-
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI----LL--------P------SNITLFTLDFS- 102 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~----L~--------~------~Gy~Vv~~D~r- 102 (486)
+....+..+.++.+.... .....|+||++.|+.|++..+..+.+. +. . +-.+++.+|.|
T Consensus 18 ~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~Pv 95 (415)
T PF00450_consen 18 VNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPV 95 (415)
T ss_dssp ECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--ST
T ss_pred cCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecC
Confidence 333467889988886553 346689999999999988877444211 11 0 13689999966
Q ss_pred CCCCCCCCCCCC-Ccch---HHHHHHHHHHHHhcCC---CCcEEEEEEcchHHHHHHHHhc----C-----CC--ccEEE
Q 011425 103 GSGLSDGDYVSL-GWHE---KDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAE----D-----PS--IAGMV 164 (486)
Q Consensus 103 G~G~S~~~~~~~-~~~~---~~Dl~~~i~~l~~~~~---~~~i~LvGhSmGG~lAl~~A~~----~-----p~--v~~lV 164 (486)
|.|.|-...... .+.. ++|+..++..+....+ ..+++|+|-|+||..+-.+|.. . +. ++|++
T Consensus 96 GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 96 GTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp TSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred ceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 899886543332 2222 4555555543333332 2589999999999987666543 2 13 89999
Q ss_pred EcCCccCHHH
Q 011425 165 LDSAFSDLFD 174 (486)
Q Consensus 165 l~sp~~~~~~ 174 (486)
+.+|..+...
T Consensus 176 IGng~~dp~~ 185 (415)
T PF00450_consen 176 IGNGWIDPRI 185 (415)
T ss_dssp EESE-SBHHH
T ss_pred ecCccccccc
Confidence 9999987654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.065 Score=51.12 Aligned_cols=98 Identities=14% Similarity=0.072 Sum_probs=62.5
Q ss_pred CCCcEEEEeCCCC--C-ChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc--chHHHHHHHHHHHHhcCCC---
Q 011425 64 TPLPCVVYCHGNS--G-CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW--HEKDDLKVVVSYLRGNKQT--- 135 (486)
Q Consensus 64 ~~~p~VV~lHG~g--g-~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~--~~~~Dl~~~i~~l~~~~~~--- 135 (486)
.+..+|-|+-|.. . ..-.|..+.+.|+++||.|++.-|.- | +..... .....+..+++.+....+.
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4556777777763 2 22346778899999999999988741 1 110000 0123445555566554332
Q ss_pred -CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcC
Q 011425 136 -SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDS 167 (486)
Q Consensus 136 -~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~s 167 (486)
-+++-+|||||+-+-+.+...++. -++.|+++
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 378889999999999998877654 56666665
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.002 Score=69.52 Aligned_cols=98 Identities=17% Similarity=0.236 Sum_probs=61.4
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhc----------------cCCeEEEEEcCCC-----CCCCCCCCCCCCcchHHHHH
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILL----------------PSNITLFTLDFSG-----SGLSDGDYVSLGWHEKDDLK 123 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~----------------~~Gy~Vv~~D~rG-----~G~S~~~~~~~~~~~~~Dl~ 123 (486)
.+-+|+|++|..|+-...+.++.... ...|..+++|+-+ ||+.- ...++-+.
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l-------~dQtEYV~ 160 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL-------LDQTEYVN 160 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH-------HHHHHHHH
Confidence 45689999999998776655543332 2246677777643 12211 01245566
Q ss_pred HHHHHHHhcCCC---------CcEEEEEEcchHHHHHHHHhcC---CC-ccEEEEcCCc
Q 011425 124 VVVSYLRGNKQT---------SRIGLWGRSMGAVTSLLYGAED---PS-IAGMVLDSAF 169 (486)
Q Consensus 124 ~~i~~l~~~~~~---------~~i~LvGhSmGG~lAl~~A~~~---p~-v~~lVl~sp~ 169 (486)
++|.++.+.+.. ..|+++||||||.+|..++..- ++ |.-++..+.+
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 777777655322 4599999999999998776542 22 6666665543
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0061 Score=58.23 Aligned_cols=98 Identities=12% Similarity=0.165 Sum_probs=63.8
Q ss_pred cEEEEeCCCCCChhh--HHHHHHHhccC-CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcEEEEE
Q 011425 67 PCVVYCHGNSGCRAD--ANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWG 142 (486)
Q Consensus 67 p~VV~lHG~gg~~~~--~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvG 142 (486)
-++|++||++..... +..+.+.+.+. |..|+++|. |-|.-..-. ... .+.+..+.+.+...... +-+.++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l--~pl--~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSL--MPL--WEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhh--ccH--HHHHHHHHHHHhcchhccCceEEEE
Confidence 568889999987665 55555555543 889999997 444111111 111 24444455555533223 6689999
Q ss_pred EcchHHHHHHHHhcCCC--ccEEEEcCCc
Q 011425 143 RSMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~--v~~lVl~sp~ 169 (486)
+|.||.++-.++...++ |+..|.++++
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 99999999999887665 8888876653
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0044 Score=64.07 Aligned_cols=83 Identities=16% Similarity=0.039 Sum_probs=60.0
Q ss_pred hHHHHHHHhccCCeE----E-EE-EcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHH
Q 011425 81 DANEAAVILLPSNIT----L-FT-LDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (486)
Q Consensus 81 ~~~~~~~~L~~~Gy~----V-v~-~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A 154 (486)
.|..+++.|.+.||. + .+ +|+| .+.. ........+...|+.+.... ..+|+|+||||||.++..++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR---~~~~----~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR---LSPA----ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh---hchh----hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHH
Confidence 788899999887764 2 23 6887 2221 00012567788888777664 68999999999999999988
Q ss_pred hcCC-------CccEEEEcCCccC
Q 011425 155 AEDP-------SIAGMVLDSAFSD 171 (486)
Q Consensus 155 ~~~p-------~v~~lVl~sp~~~ 171 (486)
...+ .|+++|.++++..
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCC
Confidence 7753 1999999887654
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0056 Score=61.73 Aligned_cols=101 Identities=17% Similarity=0.203 Sum_probs=72.8
Q ss_pred cEEEEeCCCCCChhhHHH---HH-HHhccCCeEEEEEcCCCCCCCCC--C-----CCCCCc----chHHHHHHHHHHHHh
Q 011425 67 PCVVYCHGNSGCRADANE---AA-VILLPSNITLFTLDFSGSGLSDG--D-----YVSLGW----HEKDDLKVVVSYLRG 131 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~---~~-~~L~~~Gy~Vv~~D~rG~G~S~~--~-----~~~~~~----~~~~Dl~~~i~~l~~ 131 (486)
.+|+|--|.-|+.+.|.. ++ +...+.+..+|..++|.+|+|.. . ....++ +...|.+.+|..|++
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 667778888887766643 22 22233477899999999999862 1 111222 237889999999988
Q ss_pred cCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcC
Q 011425 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDS 167 (486)
Q Consensus 132 ~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~s 167 (486)
.... .+|+++|-|+||+++..+=.++|. +.|....+
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaS 199 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAAS 199 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhcc
Confidence 7543 799999999999999999999998 55544433
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.005 Score=60.45 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=60.6
Q ss_pred CcEEEEeCCCC--CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcEEEE
Q 011425 66 LPCVVYCHGNS--GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLW 141 (486)
Q Consensus 66 ~p~VV~lHG~g--g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~Lv 141 (486)
..+||++||+| .+...+..+.+.+.. .|+.+.++- .|-+...+-+. ...+.+..+.+.|...... +-+.++
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~~~----~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDSLFM----PLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccccccc----CHHHHHHHHHHHHhcchhhcCceEEE
Confidence 45788899999 444556666666642 255555444 23222111111 1124455555555443222 469999
Q ss_pred EEcchHHHHHHHHhcCCC---ccEEEEcCCc
Q 011425 142 GRSMGAVTSLLYGAEDPS---IAGMVLDSAF 169 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~---v~~lVl~sp~ 169 (486)
|+|.||.++-.++.+.|. |+-+|.++++
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999998754 8999987654
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0018 Score=62.96 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=49.9
Q ss_pred CCcEEEEeCCCCCCh---hhHHH---HHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchH-HHHHHHHHHHHhcCCC-C
Q 011425 65 PLPCVVYCHGNSGCR---ADANE---AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEK-DDLKVVVSYLRGNKQT-S 136 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~---~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~-~ 136 (486)
+..+||+.||+|.+. ..+.. +++.... |..|.+++.- -+.+......+ +..+ +.+..+.+.+...... +
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-G~yV~si~ig-~~~~~D~~~s~-f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHP-GTYVHSIEIG-NDPSEDVENSF-FGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHST-T--EEE--SS-SSHHHHHHHHH-HSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCC-CceEEEEEEC-CCcchhhhhhH-HHHHHHHHHHHHHHHhhChhhhc
Confidence 456788999999643 23433 3333333 7888888872 22111000000 0111 2233334444433222 5
Q ss_pred cEEEEEEcchHHHHHHHHhcCCC--ccEEEEcCCc
Q 011425 137 RIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (486)
Q Consensus 137 ~i~LvGhSmGG~lAl~~A~~~p~--v~~lVl~sp~ 169 (486)
-+.++|+|.||.++-.++.+.+. |+-+|.++++
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 79999999999999999999865 8999987653
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0077 Score=65.19 Aligned_cols=116 Identities=22% Similarity=0.320 Sum_probs=72.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhH--HHHHHHhccCCeEEEEEcCC----CCCCCC--CCCCCCCcch
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADA--NEAAVILLPSNITLFTLDFS----GSGLSD--GDYVSLGWHE 118 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~--~~~~~~L~~~Gy~Vv~~D~r----G~G~S~--~~~~~~~~~~ 118 (486)
|..-+|.|......+ .|++|++||++- +...+ ......+..+...|+.+.|| |+.... ..+...+
T Consensus 97 LylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g--- 172 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG--- 172 (545)
T ss_pred ceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc---
Confidence 555578887533222 899999999963 22222 22233445557899999998 222221 1122222
Q ss_pred HHHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhcCC--C-ccEEEEcCCc
Q 011425 119 KDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAF 169 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~~p--~-v~~lVl~sp~ 169 (486)
..|+..+++|+++.. +.++|.|+|||.||..+..+...-. . +..+|.+++.
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 578999999998763 2379999999999998876554321 1 5555555544
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0063 Score=50.46 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=48.0
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 224 FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
..|+|++.++.|+++|.+.+..+.+.+++ ..++.+++ ||... ...-+.+.|.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 58999999999999999999999999987 46777777 99876 345677778888875
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.025 Score=59.24 Aligned_cols=126 Identities=16% Similarity=0.188 Sum_probs=76.2
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHH---H-------------Hhcc------CCeEEEEEcCC-
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA---V-------------ILLP------SNITLFTLDFS- 102 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~---~-------------~L~~------~Gy~Vv~~D~r- 102 (486)
.+..+.++.+.... .....|+||++-|+.|++..+..+. . .+.. +-.+++-+|.|
T Consensus 48 ~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPv 125 (433)
T PLN03016 48 ENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPV 125 (433)
T ss_pred CCeEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCC
Confidence 35677777765432 3456899999999998876432211 1 1110 13679999954
Q ss_pred CCCCCCCCCCCCCcc---hHHHHHHHHH-HHHhcCC--CCcEEEEEEcchHHHHHHHHhc----C-----CC--ccEEEE
Q 011425 103 GSGLSDGDYVSLGWH---EKDDLKVVVS-YLRGNKQ--TSRIGLWGRSMGAVTSLLYGAE----D-----PS--IAGMVL 165 (486)
Q Consensus 103 G~G~S~~~~~~~~~~---~~~Dl~~~i~-~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~----~-----p~--v~~lVl 165 (486)
|.|.|-......... .++++..++. |+..... ..+++|+|.|+||..+-.+|.. . +. ++|+++
T Consensus 126 GtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~i 205 (433)
T PLN03016 126 GSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYML 205 (433)
T ss_pred CCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEe
Confidence 888885332211111 1334444443 3333322 2789999999999876665543 2 22 899999
Q ss_pred cCCccCHH
Q 011425 166 DSAFSDLF 173 (486)
Q Consensus 166 ~sp~~~~~ 173 (486)
.+|..+..
T Consensus 206 GNg~t~~~ 213 (433)
T PLN03016 206 GNPVTYMD 213 (433)
T ss_pred cCCCcCch
Confidence 99877653
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.056 Score=56.67 Aligned_cols=128 Identities=15% Similarity=0.170 Sum_probs=77.4
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHH----------------Hhcc------CCeEEEEEcCC
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV----------------ILLP------SNITLFTLDFS 102 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~----------------~L~~------~Gy~Vv~~D~r 102 (486)
..+..+.++.+.... .....|+|+++-|+.|++..+..+.+ .+.. +-.+++-+|.|
T Consensus 49 ~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP 126 (437)
T PLN02209 49 EENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQP 126 (437)
T ss_pred CCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCC
Confidence 346677776665432 33568999999999988766533221 1111 13578999954
Q ss_pred -CCCCCCCCCC-CCC--cchHHHHHHHHHHHHhcCC---CCcEEEEEEcchHHHHHHHHhc----C-----CC--ccEEE
Q 011425 103 -GSGLSDGDYV-SLG--WHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAE----D-----PS--IAGMV 164 (486)
Q Consensus 103 -G~G~S~~~~~-~~~--~~~~~Dl~~~i~~l~~~~~---~~~i~LvGhSmGG~lAl~~A~~----~-----p~--v~~lV 164 (486)
|.|.|-.... ... ..+++|+..++....+..+ ..+++|+|.|+||..+-.+|.. . +. ++|++
T Consensus 127 vGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ 206 (437)
T PLN02209 127 VGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYV 206 (437)
T ss_pred CCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEE
Confidence 7888753221 111 1124444444443333322 2589999999999876655532 2 22 79999
Q ss_pred EcCCccCHHH
Q 011425 165 LDSAFSDLFD 174 (486)
Q Consensus 165 l~sp~~~~~~ 174 (486)
+.++..+...
T Consensus 207 igng~td~~~ 216 (437)
T PLN02209 207 LGNPITHIEF 216 (437)
T ss_pred ecCcccChhh
Confidence 9999887543
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.011 Score=44.17 Aligned_cols=50 Identities=20% Similarity=0.281 Sum_probs=29.6
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCC--CCCCCCCcEEEEeCCCCCChhhH
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSP--FPEDTPLPCVVYCHGNSGCRADA 82 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~--~~~~~~~p~VV~lHG~gg~~~~~ 82 (486)
..|+-++..+.+.||..|......+.. .+...++|+|++.||+.+++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 345668899999999999987664432 12346789999999999998877
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.031 Score=55.04 Aligned_cols=99 Identities=14% Similarity=0.084 Sum_probs=59.1
Q ss_pred CcEEEEeCCCCCChh--hHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcEEEE
Q 011425 66 LPCVVYCHGNSGCRA--DANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLW 141 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~--~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~Lv 141 (486)
..+||+.||+|.+.. ....+.+.+.. -|..+.++.. |-+.. ..+.....+.+..+.+.|...... +-+.++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~----~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVG----DSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCcc----ccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 356788999987643 33444444432 2666666654 22211 111111124444444445442222 469999
Q ss_pred EEcchHHHHHHHHhcCCC---ccEEEEcCCc
Q 011425 142 GRSMGAVTSLLYGAEDPS---IAGMVLDSAF 169 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~---v~~lVl~sp~ 169 (486)
|+|.||.++-.++.+.++ |+-+|.++++
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999998754 8999887653
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.042 Score=56.98 Aligned_cols=127 Identities=17% Similarity=0.104 Sum_probs=87.5
Q ss_pred EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-----HHHHHHhccCCeEEEEEcCCCCCCCCCCCCC----
Q 011425 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVS---- 113 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-----~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~---- 113 (486)
.+.++....=+.|.+... .....|+.|+|-|=|.....| ..+..+..+.|..|+.+++|-+|.|......
T Consensus 64 ~~~~~~~~Qq~~y~n~~~-~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~n 142 (514)
T KOG2182|consen 64 DSSNGKFFQQRFYNNNQW-AKPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSN 142 (514)
T ss_pred hcchhhhhhhheeecccc-ccCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccc
Confidence 334444333334444322 235678999999887665444 2244445556999999999999988532111
Q ss_pred CC----cchHHHHHHHHHHHHhcCCC---CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc
Q 011425 114 LG----WHEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (486)
Q Consensus 114 ~~----~~~~~Dl~~~i~~l~~~~~~---~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~ 170 (486)
.. .+.+.|++.+|+.+..+.+. .+++.+|-|+-|.++.++=.++|+ +.|.|..+++.
T Consensus 143 lk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 143 LKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 11 13378888888888777654 389999999999999999999999 77877777665
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.018 Score=51.06 Aligned_cols=51 Identities=12% Similarity=0.055 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCcc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFS 170 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~ 170 (486)
..+...++......+..+|+++|||+||.+|..++.... .+..++..+++.
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 344445555544446689999999999999999887653 245556555554
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=95.58 E-value=1.7 Score=45.52 Aligned_cols=108 Identities=19% Similarity=0.169 Sum_probs=65.3
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEE-EEEcCCCCCCCCCCCCCCCcch-HHHHHHHHHHHHhcCCC--Cc
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITL-FTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQT--SR 137 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~V-v~~D~rG~G~S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~--~~ 137 (486)
+.-+.|+.|++-|+-. ++-|..+. .+...|... +.-|.|=-|.+= . .+..+ -..+..+|+...+.++. ..
T Consensus 285 GD~KPPL~VYFSGyR~-aEGFEgy~-MMk~Lg~PfLL~~DpRleGGaF---Y-lGs~eyE~~I~~~I~~~L~~LgF~~~q 358 (511)
T TIGR03712 285 GDFKPPLNVYFSGYRP-AEGFEGYF-MMKRLGAPFLLIGDPRLEGGAF---Y-LGSDEYEQGIINVIQEKLDYLGFDHDQ 358 (511)
T ss_pred cCCCCCeEEeeccCcc-cCcchhHH-HHHhcCCCeEEeecccccccee---e-eCcHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 4456788999999965 33333221 222234443 455776444331 1 11111 23344555444444354 68
Q ss_pred EEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHH
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLM 176 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~ 176 (486)
++|-|.|||.+-|+.|++... ..++|+.-|..++....
T Consensus 359 LILSGlSMGTfgAlYYga~l~-P~AIiVgKPL~NLGtiA 396 (511)
T TIGR03712 359 LILSGLSMGTFGALYYGAKLS-PHAIIVGKPLVNLGTIA 396 (511)
T ss_pred eeeccccccchhhhhhcccCC-CceEEEcCcccchhhhh
Confidence 999999999999999998764 68888888887765543
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.02 Score=60.94 Aligned_cols=86 Identities=14% Similarity=0.015 Sum_probs=57.3
Q ss_pred hHHHHHHHhccCCeE-----EEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHh
Q 011425 81 DANEAAVILLPSNIT-----LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 81 ~~~~~~~~L~~~Gy~-----Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~ 155 (486)
.|..+++.|+..||. ...+|+| .+....... ......+...|+.+....+..+|+|+||||||.+++.++.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~~~le~r-d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWR---LSFQNTEVR-DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccc---cCccchhhh-hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHH
Confidence 457889999988875 3444555 121111000 0114668888888876655689999999999999998776
Q ss_pred cC-----------CC-----ccEEEEcCCcc
Q 011425 156 ED-----------PS-----IAGMVLDSAFS 170 (486)
Q Consensus 156 ~~-----------p~-----v~~lVl~sp~~ 170 (486)
.. ++ |++.|.++++.
T Consensus 233 wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 233 WVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hccccccccCCcchHHHHHHHHHheeccccc
Confidence 32 21 88888888764
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.53 Score=49.98 Aligned_cols=128 Identities=16% Similarity=0.182 Sum_probs=77.1
Q ss_pred EEcCCCc--EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH-HH----HHHhccCCeEEEEEcCCCCCCCCCC-CCC
Q 011425 42 IRNARGH--VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-EA----AVILLPSNITLFTLDFSGSGLSDGD-YVS 113 (486)
Q Consensus 42 ~~~~dG~--~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~-~~----~~~L~~~Gy~Vv~~D~rG~G~S~~~-~~~ 113 (486)
+...++. .|...+|+|.... .-++.+-|.| ...... .. ...-+.+||+++.-|- ||..+... ...
T Consensus 7 ~~~~~~~~~~i~fev~LP~~WN-----gR~~~~GgGG-~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~ 79 (474)
T PF07519_consen 7 IHPSDGSAPNIRFEVWLPDNWN-----GRFLQVGGGG-FAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDAS 79 (474)
T ss_pred EecCCCCcceEEEEEECChhhc-----cCeEEECCCe-eeCcccccccccccchhhhcCeEEEEecC-CCCCCccccccc
Confidence 4444555 8999999997321 1233333332 222111 11 2334456999999997 77655331 111
Q ss_pred --CC--------cchHHHHHHHHHHHHhc-CC--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHH
Q 011425 114 --LG--------WHEKDDLKVVVSYLRGN-KQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (486)
Q Consensus 114 --~~--------~~~~~Dl~~~i~~l~~~-~~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~ 176 (486)
.. +..+.++..+-..|.+. ++ ...-+..|-|-||.-++..|.++|+ ++|||..+|..+.....
T Consensus 80 ~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~~~ 156 (474)
T PF07519_consen 80 FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTHLQ 156 (474)
T ss_pred ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHHHH
Confidence 11 11122333333333332 22 3678999999999999999999998 99999999998876544
|
It also includes several bacterial homologues of unknown function. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.027 Score=48.87 Aligned_cols=50 Identities=18% Similarity=0.173 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC----C---C-ccEEEEcCCcc
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED----P---S-IAGMVLDSAFS 170 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~----p---~-v~~lVl~sp~~ 170 (486)
.+...+..+.+.....+|++.|||+||.+|..++... + . +..+..-+|..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 4445555555555557899999999999998887651 1 2 56666655554
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.25 Score=51.70 Aligned_cols=127 Identities=15% Similarity=0.234 Sum_probs=79.0
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHh----cc--------------CCeEEEEEcCC-
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVIL----LP--------------SNITLFTLDFS- 102 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L----~~--------------~Gy~Vv~~D~r- 102 (486)
+....|..|.|+.+.-.. .+...|+||++-|+.|++... .+...+ .. +-.+++-+|.|
T Consensus 51 v~~~~~~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~Pv 127 (454)
T KOG1282|consen 51 VNESEGRQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPV 127 (454)
T ss_pred CCCCCCceEEEEEEEccC--CCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCC
Confidence 333468899998775442 335579999999999987654 222111 11 12468888887
Q ss_pred CCCCCCCC-CC---CCCcchHHHH-HHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhc----C-----CC--ccEEE
Q 011425 103 GSGLSDGD-YV---SLGWHEKDDL-KVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE----D-----PS--IAGMV 164 (486)
Q Consensus 103 G~G~S~~~-~~---~~~~~~~~Dl-~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~----~-----p~--v~~lV 164 (486)
|.|-|-.. .. ......+.|. ..++.|+.+.++. .+++|.|-|++|...-.+|.. + |. ++|++
T Consensus 128 GvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~ 207 (454)
T KOG1282|consen 128 GVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYA 207 (454)
T ss_pred cCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEE
Confidence 66766321 11 1111224454 4445677665443 789999999999766555542 2 22 89999
Q ss_pred EcCCccC
Q 011425 165 LDSAFSD 171 (486)
Q Consensus 165 l~sp~~~ 171 (486)
+.+|..+
T Consensus 208 IGNg~td 214 (454)
T KOG1282|consen 208 IGNGLTD 214 (454)
T ss_pred ecCcccC
Confidence 9888765
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.036 Score=57.23 Aligned_cols=76 Identities=16% Similarity=0.021 Sum_probs=54.3
Q ss_pred hhHHHHHHHhccCCeE------EEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHH
Q 011425 80 ADANEAAVILLPSNIT------LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLY 153 (486)
Q Consensus 80 ~~~~~~~~~L~~~Gy~------Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~ 153 (486)
..|..+++.|+.-||. -+.+|+| .|-....... +....+...|+.+-+..+.++|+|+||||||.+.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwR---ls~~~~e~rd-~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWR---LSYHNSEERD-QYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchh---hccCChhHHH-HHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 4677788888887776 4567777 2221111111 2256778888888777677999999999999999999
Q ss_pred HhcCCC
Q 011425 154 GAEDPS 159 (486)
Q Consensus 154 A~~~p~ 159 (486)
+...+.
T Consensus 200 l~w~~~ 205 (473)
T KOG2369|consen 200 LKWVEA 205 (473)
T ss_pred Hhcccc
Confidence 887764
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.025 Score=59.32 Aligned_cols=100 Identities=15% Similarity=0.148 Sum_probs=63.8
Q ss_pred CCCcEEEEeCCCCC---ChhhHHHHHHHhc-cCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC-----
Q 011425 64 TPLPCVVYCHGNSG---CRADANEAAVILL-PSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ----- 134 (486)
Q Consensus 64 ~~~p~VV~lHG~gg---~~~~~~~~~~~L~-~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~----- 134 (486)
..+-+|+-+||+|- ++..-..+.+.|+ ..|+.|+.+||.-- +..+.. ...+.+.-+.-|+..+..
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLA---PEaPFP---RaleEv~fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLA---PEAPFP---RALEEVFFAYCWAINNCALLGST 467 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccC---CCCCCC---cHHHHHHHHHHHHhcCHHHhCcc
Confidence 45668899999973 2222233343333 34899999998622 222222 225667777788876532
Q ss_pred CCcEEEEEEcchHHHHHHHHhc----CCC-ccEEEEcCCc
Q 011425 135 TSRIGLWGRSMGAVTSLLYGAE----DPS-IAGMVLDSAF 169 (486)
Q Consensus 135 ~~~i~LvGhSmGG~lAl~~A~~----~p~-v~~lVl~sp~ 169 (486)
.++|+++|-|.||.+.+-+|.+ .-+ .+|+++..++
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 2899999999999987665544 223 6788875543
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.07 Score=50.77 Aligned_cols=52 Identities=10% Similarity=0.056 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-----C-CccEEEEcCCccC
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-----P-SIAGMVLDSAFSD 171 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-----p-~v~~lVl~sp~~~ 171 (486)
.++...+..+++..+..++++.|||+||.+|..++... + .+.++...+|...
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 34445555555555567899999999999998887652 2 2666666666553
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.043 Score=55.82 Aligned_cols=106 Identities=20% Similarity=0.213 Sum_probs=80.4
Q ss_pred CCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc----chHHHHHHHHHHHHhcCCCCcE
Q 011425 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW----HEKDDLKVVVSYLRGNKQTSRI 138 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~----~~~~Dl~~~i~~l~~~~~~~~i 138 (486)
+..+|+|++.-|++-...-...-...|+. -+-+.+.+|-+|.|...+..+.. +.+.|...+++.++..+. +++
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~-~kW 136 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP-GKW 136 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc-CCc
Confidence 35679999999998653322222223333 46789999999999877766543 347889999999988764 689
Q ss_pred EEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 139 GLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
+--|-|-||++++.+=..+|+ |.+.|...++.+
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 999999999999999999998 999887665544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.13 Score=52.92 Aligned_cols=53 Identities=21% Similarity=0.230 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhcCCCC--cEEEEEEcchHHHHHHHHhcC-------C--CccEEEEcCCccC
Q 011425 119 KDDLKVVVSYLRGNKQTS--RIGLWGRSMGAVTSLLYGAED-------P--SIAGMVLDSAFSD 171 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~--~i~LvGhSmGG~lAl~~A~~~-------p--~v~~lVl~sp~~~ 171 (486)
.+++...|..+.+.+... .|++.||||||.+|+++|... + .|..++..+|-..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 345666666666665544 499999999999999988541 1 2556565555543
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.17 Score=46.43 Aligned_cols=79 Identities=18% Similarity=0.102 Sum_probs=47.3
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc--CCC-----ccEEE
Q 011425 92 SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE--DPS-----IAGMV 164 (486)
Q Consensus 92 ~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~--~p~-----v~~lV 164 (486)
..+.+..++||-..... .+......-+.++...|+......+..+|+|+|+|+|+.++..++.. .+. |.++|
T Consensus 38 ~~~~~~~V~YpA~~~~~-~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avv 116 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPN-SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVV 116 (179)
T ss_dssp CEEEEEE--S---SCGG-SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEE
T ss_pred CeeEEEecCCCCCCCcc-cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEE
Confidence 34667778887432221 00000001156667777666666666899999999999999999877 221 88999
Q ss_pred EcCCccC
Q 011425 165 LDSAFSD 171 (486)
Q Consensus 165 l~sp~~~ 171 (486)
+++-+..
T Consensus 117 lfGdP~~ 123 (179)
T PF01083_consen 117 LFGDPRR 123 (179)
T ss_dssp EES-TTT
T ss_pred EecCCcc
Confidence 8776543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.12 Score=45.65 Aligned_cols=77 Identities=21% Similarity=0.179 Sum_probs=49.1
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCe-EEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNI-TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy-~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
+.-+||++-|+|.....+.++. + ..++ -++++||+..... + |+ . ....|.|+.+
T Consensus 10 gd~LIvyFaGwgtpps~v~HLi--l-peN~dl~lcYDY~dl~ld--------f----Df-s---------Ay~hirlvAw 64 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLI--L-PENHDLLLCYDYQDLNLD--------F----DF-S---------AYRHIRLVAW 64 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhcc--C-CCCCcEEEEeehhhcCcc--------c----ch-h---------hhhhhhhhhh
Confidence 3459999999998877665543 2 3344 4678998633211 0 11 0 1245679999
Q ss_pred cchHHHHHHHHhcCCCccEEEEcC
Q 011425 144 SMGAVTSLLYGAEDPSIAGMVLDS 167 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~v~~lVl~s 167 (486)
|||-.+|-.++...+ ++..+.++
T Consensus 65 SMGVwvAeR~lqg~~-lksatAiN 87 (214)
T COG2830 65 SMGVWVAERVLQGIR-LKSATAIN 87 (214)
T ss_pred hHHHHHHHHHHhhcc-ccceeeec
Confidence 999999998887665 44444444
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.13 Score=49.03 Aligned_cols=35 Identities=17% Similarity=0.055 Sum_probs=27.4
Q ss_pred CcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCcc
Q 011425 136 SRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFS 170 (486)
Q Consensus 136 ~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~ 170 (486)
+++.+.|||.||.+|..++...+ +|..++...++.
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 46999999999999999988743 377777655543
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.74 Score=42.05 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhcC-CCCcEEEEEEcchHHHHHHHHhcCC-CccEEEEcCCc
Q 011425 119 KDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDP-SIAGMVLDSAF 169 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~-~~~~i~LvGhSmGG~lAl~~A~~~p-~v~~lVl~sp~ 169 (486)
..++...++-|+... ...++.++|||+|+.++-.++...+ .+.-+|+++.+
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 556777777776654 3478999999999999998887733 38777776544
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.13 Score=48.09 Aligned_cols=70 Identities=17% Similarity=0.114 Sum_probs=45.0
Q ss_pred HHhccCCeEEEEEcCCCCCCCC------CCCCCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcC
Q 011425 87 VILLPSNITLFTLDFSGSGLSD------GDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAED 157 (486)
Q Consensus 87 ~~L~~~Gy~Vv~~D~rG~G~S~------~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~ 157 (486)
..|.. -.+|+++-||-..... ............|+.++.++..++.+. .+++|+|||.|+.+.+.++.+.
T Consensus 40 s~F~~-~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNG-VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhc-CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 33444 3688999888432111 110000001157888888877776554 6999999999999999998764
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.57 Score=42.05 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHH
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~ 176 (486)
++.-++.-.|+++..-.....+-|-||||+.|+.+..++|+ +.++|.+++..+..+..
T Consensus 84 ~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardff 142 (227)
T COG4947 84 AERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFF 142 (227)
T ss_pred HHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhc
Confidence 44445555677665444677899999999999999999999 89999999988865443
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.29 E-value=4.3 Score=46.82 Aligned_cols=95 Identities=19% Similarity=0.220 Sum_probs=60.9
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH-HHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~i~LvG 142 (486)
...|++.|+|..-|....+..++..| ..|-+|..-....+. +.++++++ .|+.+++..+.++..++|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~--dSies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPL--DSIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCc--chHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 45789999999988776666555443 223334332222111 22455443 356666665668999999
Q ss_pred EcchHHHHHHHHhcCCC---ccEEEEcCCcc
Q 011425 143 RSMGAVTSLLYGAEDPS---IAGMVLDSAFS 170 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~---v~~lVl~sp~~ 170 (486)
+|+|+.++..+|....+ ...+|++.+..
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 99999999988876432 56677766543
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.37 Score=48.98 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhc
Q 011425 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~ 156 (486)
.+.+.|..+.+.++. ..|++.|||+||.+|.++|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 344555555554443 369999999999999988764
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.5 Score=49.47 Aligned_cols=107 Identities=20% Similarity=0.210 Sum_probs=65.7
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHH-------------------hccCCeEEEEEcC-CCCCCCCC--CCCCCC-cch
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVI-------------------LLPSNITLFTLDF-SGSGLSDG--DYVSLG-WHE 118 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~-------------------L~~~Gy~Vv~~D~-rG~G~S~~--~~~~~~-~~~ 118 (486)
...++|+|+++.|+.|++..+..+.+. |.. .-.++-+|+ -|.|.|.. ...... +..
T Consensus 97 dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS~a~~~e~~~d~~~~ 175 (498)
T COG2939 97 DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFSRALGDEKKKDFEGA 175 (498)
T ss_pred CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCcccccccccccchhcc
Confidence 345689999999999998877655321 111 236888994 47888763 211111 111
Q ss_pred HHHHHHHHHHHHhcC----C-CCcEEEEEEcchHHHHHHHHhcCCC----ccEEEEcCCc
Q 011425 119 KDDLKVVVSYLRGNK----Q-TSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAF 169 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~----~-~~~i~LvGhSmGG~lAl~~A~~~p~----v~~lVl~sp~ 169 (486)
-.|+..+.+.+.+.. . ..+.+|+|-|+||.-+..+|..-.. .+++|++++.
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 356665555544432 1 2589999999999988877754221 4555555443
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.27 Score=51.25 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHh
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~ 155 (486)
.+...+..+.+..+..++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45555555555556678999999999999998875
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=91.32 E-value=2.9 Score=42.34 Aligned_cols=219 Identities=14% Similarity=0.106 Sum_probs=108.1
Q ss_pred CCCcEEEEeCCCCCChhhH-HHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC--CCcEEE
Q 011425 64 TPLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGL 140 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~-~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~L 140 (486)
.....||++=|+.|..+.+ ..+...+.+.||.++.+-.|-+-..-...... -....+...+..+...+. ..++++
T Consensus 36 ~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~--~sl~~~~~~l~~L~~~~~~~~~pi~f 113 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRI--LSLSLASTRLSELLSDYNSDPCPIIF 113 (350)
T ss_pred CccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccccccccc--chhhHHHHHHHHHhhhccCCcCceEE
Confidence 3443444444555554443 44666777889999998888553322111111 112333344444443333 468888
Q ss_pred EEEcchHHHHHHHH---h-cC-CC----ccEEEEcCCccCHHHHHH-----------HHHHHHh---hh-----CCch--
Q 011425 141 WGRSMGAVTSLLYG---A-ED-PS----IAGMVLDSAFSDLFDLML-----------ELVDVYK---IR-----LPKF-- 190 (486)
Q Consensus 141 vGhSmGG~lAl~~A---~-~~-p~----v~~lVl~sp~~~~~~~~~-----------~~~~~~~---~~-----~p~~-- 190 (486)
--+|+||...+... . +. |. +.+++..+.+........ .....+. .. +...
T Consensus 114 h~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 193 (350)
T KOG2521|consen 114 HVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEG 193 (350)
T ss_pred EEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeeccc
Confidence 89999998765443 2 22 32 455666554432111000 0000000 00 0000
Q ss_pred hHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-C---C
Q 011425 191 TVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-D---H 263 (486)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-g---H 263 (486)
........+.... ....+.+.+ .....-.....+.+.+.+..|.++|....+++.+... .....+-+.. - |
T Consensus 194 ~~~~~~~~~~~~~-~~r~~~~~~-r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h 271 (350)
T KOG2521|consen 194 GAYLLGPLAEKIS-MSRKYHFLD-RYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAH 271 (350)
T ss_pred chhhhhhhhhccc-cccchHHHH-HHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceee
Confidence 0000000000000 000000000 0001111124678888899999999999988866543 2233333333 4 4
Q ss_pred CCCChHHHHHHHHHHHHHhcCCC
Q 011425 264 NSSRPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 264 ~~~~p~~~~~~I~~FL~~~l~~~ 286 (486)
+-..|..+.+...+|+.......
T Consensus 272 ~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 272 FRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred eccCcHHHHHHHHHHHHhccccc
Confidence 45589999999999999987654
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.29 Score=50.47 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhc
Q 011425 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~ 156 (486)
+++...|..+.+.+.. -+|++.||||||.+|.++|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4455555555554433 379999999999999988764
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.99 E-value=0.33 Score=50.59 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHh
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~ 155 (486)
.+.+.+..+....+..++++.|||+||.+|..+|+
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34445554444445578999999999999998765
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.87 E-value=0.3 Score=51.33 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHh
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~ 155 (486)
.+...++.+.+..+..++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 45666666666666679999999999999998874
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=90.11 E-value=0.5 Score=49.16 Aligned_cols=116 Identities=17% Similarity=0.239 Sum_probs=67.9
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhHHHHHHHhccC-CeEEEEEcCC----C---CCCCCCCCCCCCcch
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADANEAAVILLPS-NITLFTLDFS----G---SGLSDGDYVSLGWHE 118 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~~~~~~~L~~~-Gy~Vv~~D~r----G---~G~S~~~~~~~~~~~ 118 (486)
|+.-+|.|.. ...+..++|++-|+|- +...-..-.+.|+.. +..|+.++|| | .+..+..+..++
T Consensus 121 LYlNVW~P~~--~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG--- 195 (601)
T KOG4389|consen 121 LYLNVWAPAA--DPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG--- 195 (601)
T ss_pred eEEEEeccCC--CCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc---
Confidence 6666888852 2334458889988862 222111123445443 4677788887 2 123333444444
Q ss_pred HHHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHH-HHHhcCCC--ccEEEEcCCcc
Q 011425 119 KDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSL-LYGAEDPS--IAGMVLDSAFS 170 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl-~~A~~~p~--v~~lVl~sp~~ 170 (486)
.-|-.-++.|++++. +..+|.|+|-|.|+.-.. ++.+-..+ ++..|+-++..
T Consensus 196 l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 196 LLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred hHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 467788899998863 237899999999976543 22221112 66666655543
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.54 E-value=0.41 Score=49.23 Aligned_cols=36 Identities=22% Similarity=0.232 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhcC----CCCcEEEEEEcchHHHHHHHHhc
Q 011425 121 DLKVVVSYLRGNK----QTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 121 Dl~~~i~~l~~~~----~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
.+...|..+.+.+ ...+|.+.|||+||.+|+++|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3444444444433 22479999999999999988753
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.35 E-value=0.87 Score=48.80 Aligned_cols=30 Identities=20% Similarity=0.119 Sum_probs=22.3
Q ss_pred HHHHhcCCCCcEEEEEEcchHHHHHHHHhc
Q 011425 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 127 ~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
..+...++.-+++++|||+||.+|..++..
T Consensus 242 ~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 242 LKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 333344455689999999999999887654
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=89.26 E-value=0.41 Score=50.46 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=18.4
Q ss_pred CcEEEEEEcchHHHHHHHHhc
Q 011425 136 SRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 136 ~~i~LvGhSmGG~lAl~~A~~ 156 (486)
..|.|.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999988754
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.26 E-value=0.49 Score=48.74 Aligned_cols=37 Identities=27% Similarity=0.315 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhc
Q 011425 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~ 156 (486)
+.+...|..+.+.+.. -.|.+.|||+||.+|.++|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3455555556555443 369999999999999988753
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=89.11 E-value=1.5 Score=43.97 Aligned_cols=80 Identities=16% Similarity=0.156 Sum_probs=51.2
Q ss_pred eEEEEEcCC-CCCCCCCCCCCC-Cc--chHHHHHHHHHHHHhcCC---CCcEEEEEEcchHHHHHHHHhc----C-----
Q 011425 94 ITLFTLDFS-GSGLSDGDYVSL-GW--HEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAE----D----- 157 (486)
Q Consensus 94 y~Vv~~D~r-G~G~S~~~~~~~-~~--~~~~Dl~~~i~~l~~~~~---~~~i~LvGhSmGG~lAl~~A~~----~----- 157 (486)
.+++-+|.| |.|-|-...... .. ..+.|+..++..+.+..+ ..+++|.|-|+||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899998 888885432111 11 124555555544333332 2789999999999877666543 2
Q ss_pred CC--ccEEEEcCCccCHH
Q 011425 158 PS--IAGMVLDSAFSDLF 173 (486)
Q Consensus 158 p~--v~~lVl~sp~~~~~ 173 (486)
+. ++|+++.+|..+..
T Consensus 82 ~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 82 PPINLQGYMLGNPVTYMD 99 (319)
T ss_pred CceeeeEEEeCCCCCCcc
Confidence 22 89999999887653
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.39 E-value=0.86 Score=46.48 Aligned_cols=88 Identities=18% Similarity=0.083 Sum_probs=48.3
Q ss_pred CCCcEEEEeCCCCC-ChhhHHHHHHHhccC--CeEEEEEcCCCCCCCCCC-CCCCCcchHHHHHHHHHHHHhcCCCCcEE
Q 011425 64 TPLPCVVYCHGNSG-CRADANEAAVILLPS--NITLFTLDFSGSGLSDGD-YVSLGWHEKDDLKVVVSYLRGNKQTSRIG 139 (486)
Q Consensus 64 ~~~p~VV~lHG~gg-~~~~~~~~~~~L~~~--Gy~Vv~~D~rG~G~S~~~-~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 139 (486)
++.-+||+.||+-+ +..+|...+...... ++.++...+.|.-....+ -...++ .....+++.+... .+.+|-
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~---Rla~~~~e~~~~~-si~kIS 153 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGE---RLAEEVKETLYDY-SIEKIS 153 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeec---ccHHHHhhhhhcc-ccceee
Confidence 45679999999988 455565555554443 444444444432222111 111222 2222233333222 368999
Q ss_pred EEEEcchHHHHHHHHh
Q 011425 140 LWGRSMGAVTSLLYGA 155 (486)
Q Consensus 140 LvGhSmGG~lAl~~A~ 155 (486)
++|||+||.++..+..
T Consensus 154 fvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeecCCeeeeEEEE
Confidence 9999999998865443
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.24 E-value=0.62 Score=49.07 Aligned_cols=36 Identities=28% Similarity=0.262 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhc
Q 011425 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~ 156 (486)
++.+.|..+.+.+.. ..|+|.|||+||.+|.++|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 444455555554433 379999999999999988764
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=87.53 E-value=0.7 Score=48.80 Aligned_cols=36 Identities=22% Similarity=0.198 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCC------CCcEEEEEEcchHHHHHHHHh
Q 011425 120 DDLKVVVSYLRGNKQ------TSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~------~~~i~LvGhSmGG~lAl~~A~ 155 (486)
+++...|..+.+.+. .-+|.+.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 455556666665541 247999999999999998874
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.42 E-value=0.71 Score=48.65 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhc
Q 011425 120 DDLKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~ 156 (486)
+++.+.|..+.+.+.. -+|.+.|||+||.+|.++|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 4455555555554432 479999999999999988753
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.34 E-value=0.72 Score=48.75 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHh
Q 011425 120 DDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~ 155 (486)
+++.+.|..+.+.+. .-+|.+.|||+||.+|...|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 445555555555443 258999999999999998875
|
|
| >PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function | Back alignment and domain information |
|---|
Probab=85.52 E-value=4.7 Score=39.61 Aligned_cols=91 Identities=19% Similarity=0.258 Sum_probs=54.6
Q ss_pred cEEEEeCCCCCChh------hHHHHHHHh-ccCCeEEEEEcCCCCCCC--------CCCC---C--CCCcchHHHHHHHH
Q 011425 67 PCVVYCHGNSGCRA------DANEAAVIL-LPSNITLFTLDFSGSGLS--------DGDY---V--SLGWHEKDDLKVVV 126 (486)
Q Consensus 67 p~VV~lHG~gg~~~------~~~~~~~~L-~~~Gy~Vv~~D~rG~G~S--------~~~~---~--~~~~~~~~Dl~~~i 126 (486)
.+|||+-|.+.+.. ....+...+ ...+-..+++=.+|.|.. .... . ..++.....+..++
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 46788888765432 223344445 222334455556677761 1100 0 01122256778888
Q ss_pred HHHHhcCCC-CcEEEEEEcchHHHHHHHHhcC
Q 011425 127 SYLRGNKQT-SRIGLWGRSMGAVTSLLYGAED 157 (486)
Q Consensus 127 ~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~ 157 (486)
.++.+.+.. .+|.|+|+|-|+++|-.+|..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 888776554 7899999999999999888543
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=85.11 E-value=1.7 Score=42.19 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCC
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA 168 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp 168 (486)
.+..+++-.+++.++..+|.|.|||+||.+|.++...+. +-.+...+|
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 345556666677777899999999999999998887664 444444443
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.11 E-value=1.7 Score=42.19 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCC
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA 168 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp 168 (486)
.+..+++-.+++.++..+|.|.|||+||.+|.++...+. +-.+...+|
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 345556666677777899999999999999998887664 444444443
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.03 E-value=1.1 Score=45.39 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
..+.+.++.|...++.-.|.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677777777777777799999999999999988764
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=84.38 E-value=44 Score=32.92 Aligned_cols=61 Identities=8% Similarity=-0.006 Sum_probs=43.0
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHc---CCC-cEEEEeCC-CCCCC-----ChHHHHHHHHHHHHHhcC
Q 011425 224 FIPALFGHASEDKFIRARHSDLIFNAY---AGD-KNIIKFDG-DHNSS-----RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l---~~~-~~l~~~~g-gH~~~-----~p~~~~~~I~~FL~~~l~ 284 (486)
++-.+-|-|+.|.+-...+.++....+ +.. +..++-++ ||... ..+++...|.+|+.++-.
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCc
Confidence 467888999999998776655555543 332 33444566 99854 467888999999998754
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=82.06 E-value=2 Score=39.60 Aligned_cols=58 Identities=12% Similarity=0.057 Sum_probs=44.3
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHcC---C-CcEEEEeCC-CCCCC-----ChHHHHHHHHHHHHH
Q 011425 224 FIPALFGHASEDKFIRARHSDLIFNAYA---G-DKNIIKFDG-DHNSS-----RPQFYYDSVSIFFYN 281 (486)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~---~-~~~l~~~~g-gH~~~-----~p~~~~~~I~~FL~~ 281 (486)
++++|-|-|+.|.++.+.+.....+.+. . .+..++.+| ||+.. ..++++..|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 4678889999999999988777776654 2 344556667 99854 467888999999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=81.70 E-value=13 Score=36.87 Aligned_cols=130 Identities=18% Similarity=0.254 Sum_probs=76.4
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh----HHHHH-----------HHhccCCeEEEEEcCC-CCCCCC
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD----ANEAA-----------VILLPSNITLFTLDFS-GSGLSD 108 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~----~~~~~-----------~~L~~~Gy~Vv~~D~r-G~G~S~ 108 (486)
.++....+++|..... ....+|..+++.|..+.+.. |..+. -+|. ...++.+|-| |.|.|-
T Consensus 11 r~~a~~F~wly~~~~~-~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk--~adllfvDnPVGaGfSy 87 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATAN-VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK--DADLLFVDNPVGAGFSY 87 (414)
T ss_pred ecCceEEEEEeeeccc-cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh--hccEEEecCCCcCceee
Confidence 4677778888765421 22457999999998765432 32221 1121 2456777776 666663
Q ss_pred --CC--CCCCCcchHHHHHHHHHHHHhcCC---CCcEEEEEEcchHHHHHHHHhcC------C----CccEEEEcCCccC
Q 011425 109 --GD--YVSLGWHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAED------P----SIAGMVLDSAFSD 171 (486)
Q Consensus 109 --~~--~~~~~~~~~~Dl~~~i~~l~~~~~---~~~i~LvGhSmGG~lAl~~A~~~------p----~v~~lVl~sp~~~ 171 (486)
+. +....-+.+.|+..++.-+....+ ..+++|+--|+||-+|..++... . .+.+++|-.++.+
T Consensus 88 Vdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 88 VDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 22 111111124455555544433311 26899999999999998776542 2 2778888888877
Q ss_pred HHHHHH
Q 011425 172 LFDLML 177 (486)
Q Consensus 172 ~~~~~~ 177 (486)
+.+...
T Consensus 168 P~D~V~ 173 (414)
T KOG1283|consen 168 PEDFVF 173 (414)
T ss_pred hhHhhh
Confidence 665443
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=81.16 E-value=2.8 Score=35.21 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=22.5
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA 85 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~ 85 (486)
.+|..|++.+..+. +....+|||+||+.|+--.|..+
T Consensus 75 I~g~~iHFih~rs~----~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 75 IDGLDIHFIHVRSK----RPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp ETTEEEEEEEE--S-----TT-EEEEEE--SS--GGGGHHH
T ss_pred EeeEEEEEEEeeCC----CCCCeEEEEECCCCccHHhHHhh
Confidence 36999999887653 35667899999999987776554
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=80.58 E-value=2.2 Score=43.59 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhc-CC-CCcEEEEEEcchHHHHHHHHh
Q 011425 119 KDDLKVVVSYLRGN-KQ-TSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~-~~-~~~i~LvGhSmGG~lAl~~A~ 155 (486)
..-+.+++++|... .. .++|+|.|.|.||.-++..+-
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 56788999999887 33 389999999999999987543
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=80.22 E-value=7 Score=37.15 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=35.0
Q ss_pred CeEEEEEcCCCC-CCCCCCCCCCCcch--HHHHHHHHHHHHhcC-CCCcEEEEEEcchHHHHHHHHhc
Q 011425 93 NITLFTLDFSGS-GLSDGDYVSLGWHE--KDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 93 Gy~Vv~~D~rG~-G~S~~~~~~~~~~~--~~Dl~~~i~~l~~~~-~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
|+.+..+++|.. +--.+ .....+.+ .+-+..+.+.++... ..++++|+|+|+|+.++..++.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g-~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTG-IGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCC-CCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 677888888862 11111 11111211 222333333444322 34789999999999999877654
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 486 | ||||
| 3pe6_A | 303 | Crystal Structure Of A Soluble Form Of Human Mgll I | 1e-04 | ||
| 3jwe_A | 320 | Crystal Structure Of Human Mono-Glyceride Lipase In | 2e-04 | ||
| 3hju_A | 342 | Crystal Structure Of Human Monoglyceride Lipase Len | 2e-04 |
| >pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In Complex With An Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In Complex With Sar629 Length = 320 | Back alignment and structure |
|
| >pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase Length = 342 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 7e-40
Identities = 45/257 (17%), Positives = 84/257 (32%), Gaps = 11/257 (4%)
Query: 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLP 91
++ G L + P + HG + R E A L
Sbjct: 18 YFQGMATITLERDGLQLVGTREEP----FGEIYDMAIIFHGFTANRNTSLLREIANSLRD 73
Query: 92 SNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTS 150
NI DF+G G SDG + ++ +E +D +++Y++ + I L G + G V +
Sbjct: 74 ENIASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVA 133
Query: 151 LLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKF 209
+ P I +VL + + L LE P + + + +
Sbjct: 134 SMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDH-IPDRLPFKDLTLGGFYLR 192
Query: 210 DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDH--NSSR 267
L +++ + P H ++D + S Y + DH + S
Sbjct: 193 IAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSY 252
Query: 268 PQFYYDSVSIFFYNVLH 284
+ + + F N
Sbjct: 253 QKNAVNLTTDFLQNNNA 269
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 3e-33
Identities = 40/243 (16%), Positives = 72/243 (29%), Gaps = 7/243 (2%)
Query: 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHG--NSGCRADANEAAVILLPSNITLFTL 99
+ G L MP PE P + HG L +
Sbjct: 5 YIDCDGIKLNAYLDMPKNNPE--KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRA 62
Query: 100 DFSGSGLSDGDYVSLGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158
D G G SDG + ++ VV Y + + I + G S G ++ +L A +
Sbjct: 63 DMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMER 122
Query: 159 -SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCL 217
I ++ S + + ++ + P+ + R ++ +
Sbjct: 123 DIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVE 182
Query: 218 KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHN-SSRPQFYYDSVS 276
K P L H +D+ + S Y K + H + ++V
Sbjct: 183 DFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCYDHHLELVTEAVK 242
Query: 277 IFF 279
F
Sbjct: 243 EFM 245
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-30
Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 14/243 (5%)
Query: 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNIT 95
K +R G L P ++ G + A L +
Sbjct: 6 KTIAHVLRVNNGQELHVWETPPKE-NVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFH 64
Query: 96 LFTLDFSG-SGLSDGDYVSLGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLY 153
+F D GLS G K+ L V +L+ IGL S+ A +
Sbjct: 65 VFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGT-QNIGLIAASLSARVAYEV 123
Query: 154 GAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKA------ 207
D ++ ++ +L D + + + + LP + + + + +
Sbjct: 124 -ISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCF 182
Query: 208 KFDIMDLN-CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHN 264
+ L+ L T +P + A+ D +++ + G + G H+
Sbjct: 183 EHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHD 242
Query: 265 SSR 267
Sbjct: 243 LGE 245
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 2e-21
Identities = 45/257 (17%), Positives = 73/257 (28%), Gaps = 29/257 (11%)
Query: 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP 91
G K +EI L + P T +P V++ HG G + + A +
Sbjct: 1 GMEAKLSSIEIP-VGQDELSGTLLTP------TGMPGVLFVHGWGGSQHHSLVRAREAVG 53
Query: 92 SNITLFTLDFSGSGLSDGDYVSLG-WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAV 148
T D G S+ DD+K L I + G S G
Sbjct: 54 LGCICMTFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGY 113
Query: 149 TSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK 208
S L E P + + L S + ++ + Y RR +
Sbjct: 114 LSALLTRERP-VEWLALRSPALYKDAHWDQP------KVSLNADPDLMDYRRRALAPG-- 164
Query: 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKF---DGDHNS 265
D L + L A D + +A+ +++ DH
Sbjct: 165 ----DNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHAL 220
Query: 266 SRP---QFYYDSVSIFF 279
S Q Y ++ +
Sbjct: 221 SVKEHQQEYTRALIDWL 237
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 87.0 bits (215), Expect = 1e-18
Identities = 43/249 (17%), Positives = 75/249 (30%), Gaps = 21/249 (8%)
Query: 23 LWERDFMLAGRSYKRQDLEIRNAR----GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC 78
R L ++ G + +P P P V+ G
Sbjct: 108 GQARKVELYQKAAPLLSPPAERHELVVDGIPMPVYVRIP---EGPGPHPAVIMLGGLEST 164
Query: 79 RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TS 136
+ ++ + ++L + T D G G G +E VV L +
Sbjct: 165 KEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYE-KYTSAVVDLLTKLEAIRND 223
Query: 137 RIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAV 196
IG+ GRS+G +L A +P +A + FSD D + K V
Sbjct: 224 AIGVLGRSLGGNYALKSAACEPRLAACISWGGFSD-LDYWDLETPLTKESW------KYV 276
Query: 197 QYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI 256
+ + + + L + + P H D+ + D + +
Sbjct: 277 SKVDTLEEARLHVH-AALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLN 334
Query: 257 IKF--DGDH 263
+ DGDH
Sbjct: 335 LVVEKDGDH 343
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 81.0 bits (200), Expect = 2e-17
Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 20/219 (9%)
Query: 57 PSPF-PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115
PF E+ P+ V+ HG +G A + T+ G G D
Sbjct: 31 AEPFYAENGPV-GVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTT 89
Query: 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFD 174
+H+ ++ +L+ ++ I + G SMG +L P I G+V +A D+
Sbjct: 90 FHDWVASVEEGYGWLK--QRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPA 147
Query: 175 LMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCL-----------KLAPKT 223
+ + LP++ + ++ K+ ++ L +
Sbjct: 148 IAAGMTGG--GELPRYLDSIG-SDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRI 204
Query: 224 FIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDG 261
PAL + ED + ++D+IF + +K I++
Sbjct: 205 VCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRN 243
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 2e-15
Identities = 45/271 (16%), Positives = 79/271 (29%), Gaps = 41/271 (15%)
Query: 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSN-ITL 96
DL RG + + P + P ++ HG S D N+ + T+
Sbjct: 83 YDLYFTGVRGARIHAKYIKP---KTEGKHPALIRFHGYSSNSGDWNDKL--NYVAAGFTV 137
Query: 97 FTLDFSGSGLSDGDYVSL-----------GWHEK----------DDLKVVVSYLRGNKQ- 134
+D G G D + G + D + + +
Sbjct: 138 VAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEV 197
Query: 135 -TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYK--IRLPKFT 191
R+G+ G S G SL A +P + +V + F + + +L + +
Sbjct: 198 DEDRVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYF 257
Query: 192 VKMAVQYMR--RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249
++ R V K D+ LA + L D+ +N
Sbjct: 258 RLFDPRHERENEVFTKLGYIDV-----KNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNN 312
Query: 250 YAGDKNIIKFDG-DHNSSRPQFYYDSVSIFF 279
K+I + H R + D F
Sbjct: 313 IQSKKDIKVYPDYGHEPMRG--FGDLAMQFM 341
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 76.3 bits (187), Expect = 3e-15
Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 7/153 (4%)
Query: 24 WERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-A 82
W++ F L+ + + + + N G L Y+P LP +V + +
Sbjct: 56 WDKTFPLSAK-VEHRKVTFANRYGITLAADLYLPKNR-GGDRLPAIVIGGPFGAVKEQSS 113
Query: 83 NEAAVILLPSNITLFTLDFSGSGLSDGD--YVSLGWHEKDDLKVVVSYLRGNKQ--TSRI 138
A + D S +G S G V+ +D V ++ + RI
Sbjct: 114 GLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERI 173
Query: 139 GLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD 171
G+ G +L A D + +V + +
Sbjct: 174 GVIGICGWGGMALNAVAVDKRVKAVVTSTMYDM 206
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 76.6 bits (188), Expect = 3e-15
Identities = 40/247 (16%), Positives = 76/247 (30%), Gaps = 14/247 (5%)
Query: 30 LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAAVI 88
Y + LEI + ++ + D P P V+ G + D
Sbjct: 161 AKKSKYIIKQLEIP-FEKGKITAHLHLTNT---DKPHPVVIVSAGLDSLQTDMWRLFRDH 216
Query: 89 LLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMG 146
L +I + T+D G S ++ + + V++ L R+GL G G
Sbjct: 217 LAKHDIAMLTVDMPSVGYSSKYPLTEDYSR--LHQAVLNELFSIPYVDHHRVGLIGFRFG 274
Query: 147 AVTSLLYGA-EDPSIAGMVLDSA-FSDLFDLMLELVDVYKIRLPKFTVKMAVQYMR--RV 202
+ E I V+ A D+F +L + K+ L ++ + +
Sbjct: 275 GNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSL 334
Query: 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGD 262
+ A + + + + KT +P L D + ++ K
Sbjct: 335 SGQMAAWS-LKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSKT 393
Query: 263 HNSSRPQ 269
Q
Sbjct: 394 ITQGYEQ 400
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 74.0 bits (181), Expect = 2e-14
Identities = 38/279 (13%), Positives = 87/279 (31%), Gaps = 30/279 (10%)
Query: 8 FVIRPPRAEYNPDQYLWERDFMLAGR--SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTP 65
P +E+ + E+ FMLA + +E+ + + + S D
Sbjct: 104 QFTDPKDSEFMENFRRMEKLFMLAVDNSKIPLKSIEVPFEGELL--PGYAIISE---DKA 158
Query: 66 LPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124
++ G R D + + +D G G + + + +
Sbjct: 159 QDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARAAISA 218
Query: 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLM-------L 177
++ + + T +I + G S G + +D I + + D+ ++ L
Sbjct: 219 ILDWYQ--APTEKIAIAGFSGGGYFTAQAVEKDKRIKAWIASTPIYDVAEVFRISFSTAL 276
Query: 178 ELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN-----CLKLAPKTFI-----PA 227
+ K + + + +F +D L+ A P+
Sbjct: 277 KAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPS 336
Query: 228 LFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDGDH 263
LF + + R S ++++ + D + KF +
Sbjct: 337 LFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSES 375
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 2e-13
Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 16/216 (7%)
Query: 57 PSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDG--DYVSL 114
P PF + VV H +G D N A L S ++ FSG G +
Sbjct: 13 PQPFEYEGTDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKG 72
Query: 115 GWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF--- 169
+ V+++ + +++ ++G S+G + ++ P AG V S
Sbjct: 73 NPDIWWAESSAAVAHMT--AKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPG 130
Query: 170 -SDLFDLMLELVDVYKIRLPKFTVKMAV-QYMRRVIQKKAKFDIMDLNCLKLAPKTFIPA 227
L L+ + K + Y+ + A D P
Sbjct: 131 KHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQL---AAIDQFATTVAADLNLVKQPT 187
Query: 228 LFGHASEDKFIRARHSDLIFNAYAG--DKNIIKFDG 261
G A +D+ + R + + +A + +D
Sbjct: 188 FIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDD 223
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 5e-13
Identities = 48/216 (22%), Positives = 78/216 (36%), Gaps = 13/216 (6%)
Query: 57 PSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW 116
P PF + V+ HG +G AD L T + G G+ + V G
Sbjct: 7 PKPFFFEAGERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGP 66
Query: 117 HE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA--FSDLF 173
+ D+ +L+ K +I + G S+G V SL G P I G+V A +
Sbjct: 67 DDWWQDVMNGYEFLKN-KGYEKIAVAGLSLGGVFSLKLGYTVP-IEGIVTMCAPMYIKSE 124
Query: 174 DLMLELVDVYKIRLPKFTVKMAVQYMRRVIQ-----KKAKFDIMDL--NCLKLAPKTFIP 226
+ M E V Y K K Q + + + K + +L + + P
Sbjct: 125 ETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAP 184
Query: 227 ALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDG 261
A D+ I +++I+N K I ++
Sbjct: 185 TFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQ 220
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 65.9 bits (160), Expect = 3e-12
Identities = 35/255 (13%), Positives = 72/255 (28%), Gaps = 22/255 (8%)
Query: 31 AGRSYKRQDLEI-RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI- 88
GR + + + + + + P+ P ++ G +
Sbjct: 5 VGRPIETHAITVGQGSDARSIAALVRAPA----QDERPTCIWLGGYRSDMTGTKALEMDD 60
Query: 89 -LLPSNITLFTLDFSGSGLSDGDYVSLG-WHEKDDLKVVVSYLRGNKQTSRIGL---WGR 143
+ D+SG G S G + ++ V+ + + K W
Sbjct: 61 LAASLGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIA 120
Query: 144 SMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIR---LPKFTVKMAVQYMR 200
++GMVL + D ++E + + R + +Y
Sbjct: 121 LRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSP 180
Query: 201 RVIQKKAKFDIMDLNCLKLAPKTF---IPALFGHASEDKFIRARHSDLIFNAYAGDK--- 254
+ D ++ P D + +H+ + D
Sbjct: 181 EPNIFTRAL-MEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVL 239
Query: 255 NIIKFDGDHNSSRPQ 269
+++ DGDH SRPQ
Sbjct: 240 TLVR-DGDHRLSRPQ 253
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 5e-12
Identities = 49/261 (18%), Positives = 80/261 (30%), Gaps = 41/261 (15%)
Query: 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFT 98
D+ RG ++ +P E+ LPCVV G +G R ++ I
Sbjct: 70 DVTFSGYRGQRIKGWLLVPKL--EEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFV- 126
Query: 99 LDFSGSGLSDG-----------------DYVSLGWHEKD---------DLKVVVSYLRGN 132
+D G G +++ G + D V
Sbjct: 127 MDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASF 186
Query: 133 KQ--TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKF 190
Q RI + G S G +L A ++ D F F ++LVD +
Sbjct: 187 PQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPYA---- 242
Query: 191 TVKMAVQYMRRVIQKKAKFD--IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFN 248
+++ K+ + + + A + IPALF D +N
Sbjct: 243 ---EITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYN 299
Query: 249 AYAGDKNIIKF-DGDHNSSRP 268
YAG K I + +H
Sbjct: 300 YYAGPKEIRIYPYNNHEGGGS 320
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 64.5 bits (156), Expect = 7e-12
Identities = 38/259 (14%), Positives = 76/259 (29%), Gaps = 65/259 (25%)
Query: 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA--NEAAVILLPSNITLFTLDF 101
G + ++ P E + V+ HG + + + A +L+ I+ +D
Sbjct: 37 EVDGRTVPGVYWSP---AEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93
Query: 102 SGSG-------------LSDGDYVSLGWHEKD-------DLKVVVSYLRGNKQTSRIGLW 141
G G + D WHE D + ++ + G W
Sbjct: 94 PGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWW 153
Query: 142 GRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRR 201
G SMG + L A D I +L +
Sbjct: 154 GLSMGTMMGLPVTASDKRIKVALLGLMGVEGV---------------------------- 185
Query: 202 VIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFD 260
+ ++LAP+ P + +D+ + + +F K +
Sbjct: 186 ----------NGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNP 235
Query: 261 GDHNSSRPQFYYDSVSIFF 279
G H+ + P + + ++ +
Sbjct: 236 GKHS-AVPTWEMFAGTVDY 253
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 62.8 bits (152), Expect = 2e-11
Identities = 35/257 (13%), Positives = 56/257 (21%), Gaps = 45/257 (17%)
Query: 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTL 99
+ L +P + P ++ HG G + L
Sbjct: 3 VRTERLTLAGLSVLARIP-----EAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAF 57
Query: 100 DFSGSGLSDGD--------YVSLGWHEKDDLKVVVSYL---RGNKQTSRIGLWGRSMGAV 148
D G +G YV + K + + + L G S+GA
Sbjct: 58 DAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAF 117
Query: 149 TSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK 208
+ L AE G++ L V L + A +
Sbjct: 118 VAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRG---------- 167
Query: 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA-----YAGDKNIIKFDG-D 262
L H S D + + A G +G
Sbjct: 168 --------EAYGGVPL---LHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAG 216
Query: 263 HNSSRPQFYYDSVSIFF 279
H + F
Sbjct: 217 HTLTPL--MARVGLAFL 231
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 6e-11
Identities = 40/284 (14%), Positives = 82/284 (28%), Gaps = 67/284 (23%)
Query: 12 PPRAEYNP-DQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVV 70
+ P +R+ Y+ + E V +P + P+P ++
Sbjct: 72 QIKNSPAPVCIKREQRE------GYRLEKWEFYPLPKCVSTFLVLIPDNINK--PVPAIL 123
Query: 71 YCHGNSGC------------------RADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112
G+ G + A+ + +D +G +
Sbjct: 124 CIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLER 183
Query: 113 ---------------------SLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVT 149
S + V+++++ K RI + G S+G
Sbjct: 184 YTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEP 243
Query: 150 SLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKF--TVKMAVQYMRRVIQKKA 207
++ G D SI V + + + K F +++ + +
Sbjct: 244 MMVLGTLDTSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHLIPDFWK------ 297
Query: 208 KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251
F+ D+ LAP+ P + D+ + DL+ AYA
Sbjct: 298 NFNFPDIVAA-LAPR---PIILTEGGLDRDL-----DLVRKAYA 332
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} Length = 391 | Back alignment and structure |
|---|
Score = 60.3 bits (145), Expect = 5e-10
Identities = 36/300 (12%), Positives = 77/300 (25%), Gaps = 56/300 (18%)
Query: 9 VIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPC 68
+++ P + P + + Y + E V P +P
Sbjct: 62 IMKFPEIKRQPSPVCVKTE---KKEGYILEKWEFYPFPKSVSTFLVLKPEHL--KGAVPG 116
Query: 69 VVYCHGNSGC------------------RADANEAAVILLPSNITLFTLDFSGSGLSDGD 110
V+ G+ A+ ++ +D + +G +
Sbjct: 117 VLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDL 176
Query: 111 YV---------------------SLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGA 147
S + V+++++ RI + G S+G
Sbjct: 177 ECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGT 236
Query: 148 VTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKA 207
++ G D I V + + + + K F +
Sbjct: 237 EPMMVLGVLDKDIYAFVYNDFLCQTQERAVVMTKPDKENRRPF----PNSIRHLIPGYWR 292
Query: 208 KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSR 267
F+ D+ LAP+ P +F D+ R + A +N + +
Sbjct: 293 YFNFPDVVAS-LAPR---PIIFTEGGLDR--DFRLVQSAYAASGKPENAEFHHYPKFADK 346
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 5e-09
Identities = 40/260 (15%), Positives = 80/260 (30%), Gaps = 37/260 (14%)
Query: 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHG-NSGCRADANEAAVILLPSN--I 94
L ++ + + +P ++ P P +V HG N+ + +E ++ +
Sbjct: 57 YRLTYKSFGNARITGWYAVP---DKEGPHPAIVKYHGYNASYDGEIHE--MVNWALHGYA 111
Query: 95 TLFTLDFSGSGLSDGDYVSLGWHEK-------------------DDLKVVVSYL--RGNK 133
T G S+ +S H D + +
Sbjct: 112 TFGM-LVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEV 170
Query: 134 QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDV--YKIRLPKFT 191
+RIG+ G S G ++ A V D + F+ +++ Y F
Sbjct: 171 DETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDVALEQPYLEINSFFR 230
Query: 192 VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251
+ + + ++ + FDI + LA + +P L DK +N
Sbjct: 231 RNGSPETEVQAMKTLSYFDI-----MNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLE 285
Query: 252 GDKNIIKFDGDHNSSRPQFY 271
K + + + P F
Sbjct: 286 TKKELKVYRYFGHEYIPAFQ 305
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 54/283 (19%), Positives = 99/283 (34%), Gaps = 39/283 (13%)
Query: 11 RPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVV 70
+ P+ + + NA G L C ++ P TP +
Sbjct: 9 HHGAGDRGPEFPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKP----TGTPKALIF 64
Query: 71 YCHG---NSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEK--DDLKVV 125
HG +SG R + E A +L+ ++ +F D G G S+G+ + + D+
Sbjct: 65 VSHGAGEHSG-RYE--ELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQH 121
Query: 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYK 184
V ++ + + L G SMG ++L AE P AGMVL S V
Sbjct: 122 VDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLA 181
Query: 185 IR-----LPKFTV-KMAVQYMRRVIQKKAKF-----------------DIMDL--NCLKL 219
+ LP ++ + + R + + +++ +
Sbjct: 182 AKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERA 241
Query: 220 APKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDG 261
PK +P L S D+ ++ + L+ DK + ++G
Sbjct: 242 LPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEG 284
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 39/257 (15%)
Query: 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHG---NSGCRADANEAAVILLPSN 93
+ + NA G L C ++ P TP + HG +SG R + E A +L+ +
Sbjct: 17 QDLPHLVNADGQYLFCRYWAP----TGTPKALIFVSHGAGEHSG-RYE--ELARMLMGLD 69
Query: 94 ITLFTLDFSGSGLSDGDYVSLGWHEK--DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSL 151
+ +F D G G S+G+ + + D+ V ++ + + L G SMG ++
Sbjct: 70 LLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAI 129
Query: 152 LYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIR-----LPKFTV-KMAVQYMRRVIQ 204
L AE P AGMVL S V + LP + + + R
Sbjct: 130 LTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKT 189
Query: 205 KKAKF-----------------DIMDL--NCLKLAPKTFIPALFGHASEDKFIRARHSDL 245
+ + +++ + PK +P L S D+ ++ + L
Sbjct: 190 EVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYL 249
Query: 246 IFNAYAG-DKNIIKFDG 261
+ DK + ++G
Sbjct: 250 LMELAKSQDKTLKIYEG 266
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 52.1 bits (124), Expect = 2e-07
Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 21/220 (9%)
Query: 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS 92
R + + ++ R ++ + ++P P P P ++ G G + A +L
Sbjct: 128 RHFLPPGVWRQSVRAGRVRATLFLP---PGPGPFPGIIDIFGIGGGLLEYR--ASLLAGH 182
Query: 93 NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTS 150
L + + ++ + + V Y+ + Q IGL G S+GA
Sbjct: 183 GFATLALAYYNF---EDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADIC 239
Query: 151 LLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFD 210
L + +++ V + + + L ++ V + V +
Sbjct: 240 LSMASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNA 299
Query: 211 IMDLNCLKLAPKTFIPA-------LFGHASEDKFIRARHS 243
++ + IP L +D R+
Sbjct: 300 LVG----GYKNPSMIPIEKAQGPILLIVGQDDHNWRSELY 335
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 9e-07
Identities = 33/213 (15%), Positives = 61/213 (28%), Gaps = 21/213 (9%)
Query: 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS 92
R + + R ++ + ++P PE P P +V G G A +L
Sbjct: 144 RYFLPPGVRREPVRVGRVRGTLFLP---PEPGPFPGIVDMFGTGG--GLLEYRASLLAGK 198
Query: 93 NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLR--GNKQTSRIGLWGRSMGAVTS 150
+ L + +L + + ++YL + +GL G S G
Sbjct: 199 GFAVMALAYYNYEDLPKTMETL---HLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELC 255
Query: 151 LLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFD 210
L + I V+ + L + ++ V
Sbjct: 256 LSMASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNS 315
Query: 211 IMDLNCLKLAPKTFIPA-------LFGHASEDK 236
++ K+FIP LF +D
Sbjct: 316 PLE----GPDQKSFIPVERAESTFLFLVGQDDH 344
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 Length = 763 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 1e-06
Identities = 28/251 (11%), Positives = 65/251 (25%), Gaps = 18/251 (7%)
Query: 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFT 98
++E+ H + +P +V L
Sbjct: 227 NVELEEKTSHEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIY 286
Query: 99 LDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ----------------TSRIGLWG 142
+ G+ SDG S + + + V+ +L G + ++ + G
Sbjct: 287 VAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTG 346
Query: 143 RSMGAVTSLLYGAED-PSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRR 201
+S + + ++ ++ S ++ E V + +
Sbjct: 347 KSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTY 406
Query: 202 VIQKKAK-FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD 260
F + K + ++F R+ + + D I+
Sbjct: 407 SRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGL 466
Query: 261 GDHNSSRPQFY 271
D N + Q Y
Sbjct: 467 QDWNVTPEQAY 477
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 1e-06
Identities = 36/268 (13%), Positives = 70/268 (26%), Gaps = 50/268 (18%)
Query: 15 AEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCS-HYMPSP-------FPEDTPL 66
Y Y+ + + RN+ + + Y PE TP+
Sbjct: 6 DAYANGAYI--EGAADYPPRWAASAEDFRNSLQDRARLNLSYGEGDRHKFDLFLPEGTPV 63
Query: 67 PCVVYCHG---NSGCRADANEAAVILLPSNITLFTLDFS-GSGLSDGDYVSLGWHEKDDL 122
V+ HG + ++ + AV L + + + + +
Sbjct: 64 GLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEIT-------QQI 116
Query: 123 KVVVSYLRGNKQTSRIGLWGRSMGA-------VTSLLYGAEDPSIAGMVLDSAFSDLFDL 175
V+ I L G S G +L A I +V S SDL L
Sbjct: 117 SQAVTAAAKE-IDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL 175
Query: 176 MLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASED 235
+ M + A + + +++ + +
Sbjct: 176 LRT-------------------SMNEKFKMDAD-AAIAESPVEMQNRYDAKVTVWVGGAE 215
Query: 236 KFIRARHSDLIFNAYAGDKNIIKFDGDH 263
+ + + A+ D I + H
Sbjct: 216 RPAFLDQAIWLVEAWDADHVIAF-EKHH 242
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} Length = 258 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 2e-06
Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 5/139 (3%)
Query: 55 YMPSPFPE-DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113
Y P + P +++ +G + + + S +G
Sbjct: 37 YRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTGREMLAC 96
Query: 114 LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLF 173
L + + G T R+G G S G S++ +D + ++
Sbjct: 97 LDY-LVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMA-GQDTRVRTTAPIQPYT--L 152
Query: 174 DLMLELVDVYKIRLPKFTV 192
L + + + P F +
Sbjct: 153 GLGHDSASQRRQQGPMFLM 171
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* Length = 277 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 2e-06
Identities = 29/208 (13%), Positives = 56/208 (26%), Gaps = 25/208 (12%)
Query: 55 YMPSPFPE---DTPLPCVVYCHG---NSGCRADANEAAVILLPSNITLFTLDFSGSGLSD 108
Y + P ++ C G + A ++ + + L++ L
Sbjct: 21 YWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQ---LIV 77
Query: 109 GDYVSLGWHEKDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGA--VTSLLYGAEDPSIA 161
GD S+ L + ++ RI L G S G V + A P +
Sbjct: 78 GDQ-SVYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELR 136
Query: 162 GMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP 221
+ ++ V + T + + D +L
Sbjct: 137 TRYHLDHYQGQHAAIILGYPVIDLTAGFPT--------TSAARNQITTDARLWAAQRLVT 188
Query: 222 KTFIPALFGHASEDKFIRARHSDLIFNA 249
PA + D+ + +S A
Sbjct: 189 PASKPAFVWQTATDESVPPINSLKYVQA 216
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} Length = 208 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 2e-06
Identities = 36/234 (15%), Positives = 61/234 (26%), Gaps = 54/234 (23%)
Query: 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI-----LL 90
+D I+ G L+ P + CH + N V L
Sbjct: 5 TNEDFLIQGPVGQ-LEVMITRP---KGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALD 60
Query: 91 PSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTS 150
+ +F G G S G Y + G E +DLK V+ ++ + I L G S GA S
Sbjct: 61 ELGLKTVRFNFRGVGKSQGRYDN-GVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYIS 119
Query: 151 LLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFD 210
+ +A ++ +
Sbjct: 120 AKVAYDQK-VAQLISVAPPVFYEGFA---------------------------------S 145
Query: 211 IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DH 263
+ + P L +D+ + N + + G H
Sbjct: 146 LTQMAS---------PWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASH 190
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 47.7 bits (112), Expect = 5e-06
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 11/136 (8%)
Query: 69 VVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSD-------GDYVSLGWHE-K 119
+ +G D + L + ++T+D+ + + GW
Sbjct: 68 TISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWI 127
Query: 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA--EDPSIAGMVLDSAFSDLFDLML 177
D+K VVS+++ + RI L G S G + +L Y + I G++L +
Sbjct: 128 SDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRP 187
Query: 178 ELVDVYKIRLPKFTVK 193
+ + + K
Sbjct: 188 KFYTPEVNSIEEMEAK 203
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} Length = 283 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 5e-06
Identities = 37/247 (14%), Positives = 69/247 (27%), Gaps = 30/247 (12%)
Query: 13 PRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYC 72
+ ++ + G +Q L A+ L + P T LP ++
Sbjct: 4 DKIHHHHHH----ENLYFQGMQVIKQKLTATCAQ---LTGYLHQPDTNAHQTNLPAIIIV 56
Query: 73 HG---NSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYL 129
G A A A+ F L+++ L LG DL V+ L
Sbjct: 57 PGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYT---LLTDQQ-PLGLAPVLDLGRAVNLL 112
Query: 130 RGNKQ-----TSRIGLWGRSMGA--VTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDV 182
R + +I G S+G V + + A +++L
Sbjct: 113 RQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVL----G 168
Query: 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242
Y P + + + +L + P ++D + A +
Sbjct: 169 Y----PVISPLLGFPKDDATLATWTP-TPNELAADQHVNSDNQPTFIWTTADDPIVPATN 223
Query: 243 SDLIFNA 249
+ A
Sbjct: 224 TLAYATA 230
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 9e-06
Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 11/122 (9%)
Query: 61 PEDTPLPCVVYCHGNSGCRADANEAAV--ILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118
P V++ HG+ R V +L + + +D + D +
Sbjct: 31 PNG-ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRF 89
Query: 119 -----KDDLKVVVSYLRGNKQTS--RIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170
L +L N T ++G +G S G +L+ AE P + +V
Sbjct: 90 DIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRP 149
Query: 171 DL 172
DL
Sbjct: 150 DL 151
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} Length = 306 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 1e-05
Identities = 17/123 (13%), Positives = 38/123 (30%), Gaps = 18/123 (14%)
Query: 55 YMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114
Y P E+ + G +G ++ + + +D + +
Sbjct: 88 YYPR---ENNTYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDSRA-- 142
Query: 115 GWHEKDDLKVVVSYL--------RGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLD 166
L + Y+ R SR+ + G SMG +L ++ P + +
Sbjct: 143 -----RQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPDLKAAIPL 197
Query: 167 SAF 169
+ +
Sbjct: 198 TPW 200
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 Length = 220 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 2e-05
Identities = 39/235 (16%), Positives = 65/235 (27%), Gaps = 53/235 (22%)
Query: 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-----EAAVILL 90
+ L + G L + +P P P + CH S + AA L
Sbjct: 9 ESAALTLDGPVGP-LDVAVDLPEPDVAVQP-VTAIVCHPLSTEGGSMHNKVVTMAARALR 66
Query: 91 PSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTS 150
IT+ +F G S G + E+DDL+ V ++R + T + L G S GA S
Sbjct: 67 ELGITVVRFNFRSVGTSAGSFDHGD-GEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVS 125
Query: 151 LLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFD 210
L A Q + + ++D
Sbjct: 126 LRAAAALE-------------------------------------PQVLISIAPPAGRWD 148
Query: 211 IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHN 264
D+ L D+ + + +++ H
Sbjct: 149 FSDVQP-------PAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHF 196
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 54/360 (15%), Positives = 105/360 (29%), Gaps = 118/360 (32%)
Query: 1 MIDQFI--------NFVIRPPRAEYN-P----DQYLWERDFM------LAGRSYKRQD-- 39
M+ +F+ F++ P + E P Y+ +RD + A + R
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY 137
Query: 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG----------CRADA------- 82
L++R A L E P V+ G G C +
Sbjct: 138 LKLRQA----LL----------ELRPAKNVL-IDGVLGSGKTWVALDVCLSYKVQCKMDF 182
Query: 83 ----------NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGN 132
N +L L+ +D + + SD S ++ + L +
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS--SNIKLRIHSIQAELRRLLKS 240
Query: 133 KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS----DLFDL---ML------EL 179
K LL VL + + + F+L +L ++
Sbjct: 241 KPYEN------------CLL-----------VLLNVQNAKAWNAFNLSCKILLTTRFKQV 277
Query: 180 VDV------YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDL--NCLKLAPKTFIPALFGH 231
D I L ++ + ++ ++ K DL L P ++
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP--RRLSIIAE 335
Query: 232 ASEDKFIRARHSDLIFNAYAGDK--NIIKFDGDH-NSSRPQFYYDSVSIFFYNVLHPPQI 288
+ D + + DK II+ + + + +D +S+F + P +
Sbjct: 336 SIRDGLATWDN----WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 Length = 249 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 2e-05
Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 10/127 (7%)
Query: 55 YMPSPFPEDTPLPCVVYCHGNSGCRADAN-----EAAVILLPSNITLFTLDFSGSGLSDG 109
Y P ++ P + H + N + + T +F G S G
Sbjct: 39 YQP---SKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQG 95
Query: 110 DYVSLGWHEKDDLKVVVSYLRG-NKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA 168
++ G E D + +++ + + + G S GA + P I G + +
Sbjct: 96 EF-DHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAP 154
Query: 169 FSDLFDL 175
+ +D
Sbjct: 155 QPNTYDF 161
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A Length = 587 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 5e-05
Identities = 25/151 (16%), Positives = 54/151 (35%), Gaps = 10/151 (6%)
Query: 29 MLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVV----YCHGNSGCRADANE 84
M+ G ++ + G L Y P D P+P ++ Y + + +
Sbjct: 1 MVDGNYSVASNVMVPMRDGVRLAVDLYRP---DADGPVPVLLVRNPYDKFDVFAWSTQST 57
Query: 85 AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS-RIGLWGR 143
+ + + D G S+G++V ++ D + +S++ +G++G
Sbjct: 58 NWLEFVRDGYAVVIQDTRGLFASEGEFVPHV-DDEADAEDTLSWILEQAWCDGNVGMFGV 116
Query: 144 SMGAVTSLLYGAED-PSIAGMVLDSAFSDLF 173
S VT + + A +DL+
Sbjct: 117 SYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 Length = 262 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 6e-05
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 14/116 (12%)
Query: 55 YMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114
Y P+ + VV G + ++ L +FT+D + +
Sbjct: 44 YYPTSTADG-TFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDSRG-- 100
Query: 115 GWHEKDDLKVVVSYL------RGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMV 164
L + YL R +R+G+ G SMG SL S+ +
Sbjct: 101 -----RQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTSLKAAI 151
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A Length = 652 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 7e-05
Identities = 31/166 (18%), Positives = 51/166 (30%), Gaps = 28/166 (16%)
Query: 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVV----YCHGNSGCRADANEAAVI 88
R Y ++++ + G L +P P ++ Y R
Sbjct: 33 RDYIKREVMVPMRDGVKLYTVIVIP---KNARNAPILLTRTPYNAKGRANRVPNALTMRE 89
Query: 89 LLPSNITLFT--------LDFSGSGLSDGDYVSL----------GWHEKDDLKVVVSYLR 130
+LP +F D G S GDYV E D V +L
Sbjct: 90 VLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLV 149
Query: 131 GNKQ--TSRIGLWGRSMGAVTSLLYGAED-PSIAGMVLDSAFSDLF 173
N R+G+ G S T ++ + P++ +S D +
Sbjct: 150 HNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGW 195
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} Length = 276 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 7e-05
Identities = 25/206 (12%), Positives = 65/206 (31%), Gaps = 33/206 (16%)
Query: 55 YMPSP--FPEDTPLPCVVYCHG---NSGCRADANEAAVILLPSNITLFTLDFSGSGLSDG 109
Y E+ P ++ C G + +++ A+ L + L+++ + +
Sbjct: 30 YQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYT---VMNK 86
Query: 110 DYVSLGWHEK-DDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAEDPSIAGM 163
+ ++++ V S + N + ++ L G S G +A
Sbjct: 87 GTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGG-----------HLAAW 135
Query: 164 VLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT 223
+S + + Y P + + + +I + N + +
Sbjct: 136 YGNSEQIHRPKGV---ILCY----PVTSFTFGWPSDLSHFNFEIE-NISEYNISEKVTSS 187
Query: 224 FIPALFGHASEDKFIRARHSDLIFNA 249
P H ++D+ + +S +
Sbjct: 188 TPPTFIWHTADDEGVPIYNSLKYCDR 213
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* Length = 560 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 9e-05
Identities = 33/192 (17%), Positives = 55/192 (28%), Gaps = 44/192 (22%)
Query: 10 IRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCV 69
I +Y + + E+D + R D G L + + P+ +D P V
Sbjct: 26 IVVDSVQYGNQEMIMEKDGTVEMR-----D-------GEKLYINIFRPN---KDGKFPVV 70
Query: 70 V----Y---CHGNSGCRADANEAAVILLPSNITLFTL----------------DFSGSGL 106
+ Y + S+ T GS
Sbjct: 71 MSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALRGSDK 130
Query: 107 SDGDYVSLGWHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAEDP-SIAG 162
S G E +D V+ + Q IG G S AVT + +P +
Sbjct: 131 SKGVLSPWSKREAEDYYEVIEWAA--NQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKA 188
Query: 163 MVLDSAFSDLFD 174
M+ +D++
Sbjct: 189 MIPWEGLNDMYR 200
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 1e-04
Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 5/111 (4%)
Query: 67 PCVVYCHG-NSGCRADANEA-AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124
+ HG SG A A A + T DF+ L+
Sbjct: 5 GHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVR--GRLQR 62
Query: 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDL 175
++ R + + L G S+G+ + + + L + + L
Sbjct: 63 LLEIARAATEKGPVVLAGSSLGSYIAAQV-SLQVPTRALFLMVPPTKMGPL 112
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} Length = 375 | Back alignment and structure |
|---|
Score = 42.6 bits (99), Expect = 2e-04
Identities = 40/259 (15%), Positives = 70/259 (27%), Gaps = 38/259 (14%)
Query: 55 YMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFS----------GS 104
+ P P P ++ G S A A A + NI S GS
Sbjct: 95 TITYPSSGTAPYPAIIGYGGGSLP-APAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGS 153
Query: 105 GLSDGDYVSLGWHEKDDLKVVVSYL----RGNKQTSRIGLWGRSMGAVTSLLYGAEDPSI 160
S G + W + V+ L T++IG+ G S +++ GA + I
Sbjct: 154 SHSAGAMTAWAW----GVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEKRI 209
Query: 161 AGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI------MDL 214
+ + + + T + + D
Sbjct: 210 VLTLPQESGAGGSACWRISDYLKSQGANIQTASEIIGEDPWFSTTFNSYVNQVPVLPFDH 269
Query: 215 NCLK--LAPKTFIPALFGHASED------KFIRARHSDLIFNAY-AGDKNIIKFDGDHN- 264
+ L +AP+ + D F + + + A D G H
Sbjct: 270 HSLAALIAPR---GLFVIDNNIDWLGPQSCFGCMTAAHMAWQALGVSDHMGYSQIGAHAH 326
Query: 265 SSRPQFYYDSVSIFFYNVL 283
+ P ++ F L
Sbjct: 327 CAFPSNQQSQLTAFVQKFL 345
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} Length = 377 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 2e-04
Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 17/136 (12%)
Query: 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA---------AVILLPSN 93
++ G++ S + P + + Y HG R D A +
Sbjct: 51 QSPDGNLTIASGLVAMPIHPVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAG 110
Query: 94 ITLFTLDFSGSGLSDG------DYVSLGWHEKDDLKVVVSYL--RGNKQTSRIGLWGRSM 145
D+ G G ++ +L D L + ++ L G S
Sbjct: 111 YMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSE 170
Query: 146 GAVTSLLYGAEDPSIA 161
G ++++
Sbjct: 171 GGFSTIVMFEMLAKEY 186
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 Length = 615 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 7e-04
Identities = 28/163 (17%), Positives = 49/163 (30%), Gaps = 27/163 (16%)
Query: 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVV----YCHGNSGCRADANEAAVILL 90
Y ++++ I G L +P P V+ Y R + +L
Sbjct: 23 YIKREVMIPMRDGVKLHTVIVLPK---GAKNAPIVLTRTPYDASGRTERLASPHMKDLLS 79
Query: 91 PSNITL-------FTLDFSGSGLSDGDYVSLG----------WHEKDDLKVVVSYLRGNK 133
+ D G S+GDYV D + +L N
Sbjct: 80 AGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNV 139
Query: 134 Q--TSRIGLWGRSMGAVTSLLYGAED-PSIAGMVLDSAFSDLF 173
++G+ G S T ++ P++ V +S D +
Sbjct: 140 SESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGW 182
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 486 | |||
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.95 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.95 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.94 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.94 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.94 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.94 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.94 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.94 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.94 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.94 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.94 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.94 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.94 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.93 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.93 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.93 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.93 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.93 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.93 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.93 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.93 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.93 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.93 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.93 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.93 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.93 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.93 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.93 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.93 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.92 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.92 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.92 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.92 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.92 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.92 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.92 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.92 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.92 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.92 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.92 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.92 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.92 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.92 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.92 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.91 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.91 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.91 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.91 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.91 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.91 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.91 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.91 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.91 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.91 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.91 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.91 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.91 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.91 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.91 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.91 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.91 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.91 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.91 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.91 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.91 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.91 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.91 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.9 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.9 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.9 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.9 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.9 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.9 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.9 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.9 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.9 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.9 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.9 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.9 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.9 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.9 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.9 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.9 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.9 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.9 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.89 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.89 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.89 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.89 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.89 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.89 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.89 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.89 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.89 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.89 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.89 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.89 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.89 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.88 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.88 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.88 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.88 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.88 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.88 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.88 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.88 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.88 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.88 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.88 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.87 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.87 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.87 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.87 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.87 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.87 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.87 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.87 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.86 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.86 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.86 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.86 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.86 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.86 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.77 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.86 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.86 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.86 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.85 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.85 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.85 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.85 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.85 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.85 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.85 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.85 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.85 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.85 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.85 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.85 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.85 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.85 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.84 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.84 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.84 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.84 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.84 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.84 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.84 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.84 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.84 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.84 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.84 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.84 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.83 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.83 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.83 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.83 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.83 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.83 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.83 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.82 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.82 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.82 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.82 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.82 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.82 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.81 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.81 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.81 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.81 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.81 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.8 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.8 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.8 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.8 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.8 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.79 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.79 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.79 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.79 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.78 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.78 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.78 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.78 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.78 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.76 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.76 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.75 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.74 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.74 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.74 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.72 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.7 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.69 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.68 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.67 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.66 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.65 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.64 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.64 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.59 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.57 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.57 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.57 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.56 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.56 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.56 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.56 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.53 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.5 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.44 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.44 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.43 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.35 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.34 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.34 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.32 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.31 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.3 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.29 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.27 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.24 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.23 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.22 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.2 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.18 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.18 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.15 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.14 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 98.98 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 98.97 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.82 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.8 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.62 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.62 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.58 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.56 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.55 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.5 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.47 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.3 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.3 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.27 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.23 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.18 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.18 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.17 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.89 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.77 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.76 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.52 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 97.45 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.4 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.08 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.05 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.95 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.93 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 95.35 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 95.3 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 95.3 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 95.1 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 94.9 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 94.66 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 94.34 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 94.15 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 93.74 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 93.38 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 93.37 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 93.18 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 93.08 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 92.83 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 92.35 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 90.75 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 87.33 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 85.83 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 82.02 |
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-28 Score=232.82 Aligned_cols=228 Identities=18% Similarity=0.226 Sum_probs=167.8
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC--hhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc-hHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC--RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH-EKDD 121 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~--~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~-~~~D 121 (486)
.||.+|.+++|.|.+ ..++.|+|||+||++++ ...|..++..|+++||.|+++|+||||.|++......+. .++|
T Consensus 8 ~~g~~l~~~~~~p~~--~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 85 (251)
T 2wtm_A 8 CDGIKLNAYLDMPKN--NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTN 85 (251)
T ss_dssp ETTEEEEEEEECCTT--CCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHH
T ss_pred cCCcEEEEEEEccCC--CCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHHHHHHH
Confidence 489999999998863 12467899999999999 788889999999999999999999999998754444332 2788
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHH-HH--H-hhhCCchh--HH-
Q 011425 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELV-DV--Y-KIRLPKFT--VK- 193 (486)
Q Consensus 122 l~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~-~~--~-~~~~p~~~--~~- 193 (486)
+.++++++.+....++++|+||||||.+++.+|..+|+ |+++|+++|............ .. + ....+... ..
T Consensus 86 ~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (251)
T 2wtm_A 86 ILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDG 165 (251)
T ss_dssp HHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTTBCCSEEEETTT
T ss_pred HHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCchhcchHHhhhhc
Confidence 99999999776445799999999999999999999997 999999998865433221100 00 0 00001000 00
Q ss_pred --HHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-ChH
Q 011425 194 --MAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQ 269 (486)
Q Consensus 194 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-~p~ 269 (486)
....+... ....+....+.++++|+|+++|++|.++|++.+..+++.++ +.+++++++ ||... .++
T Consensus 166 ~~~~~~~~~~---------~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~ 235 (251)
T 2wtm_A 166 RKLKGNYVRV---------AQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK-NCKLVTIPGDTHCYDHHLE 235 (251)
T ss_dssp EEEETHHHHH---------HTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSS-SEEEEEETTCCTTCTTTHH
T ss_pred cccchHHHHH---------HHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCC-CcEEEEECCCCcccchhHH
Confidence 00000000 00123334556788999999999999999999999998885 578888987 99874 578
Q ss_pred HHHHHHHHHHHHhcC
Q 011425 270 FYYDSVSIFFYNVLH 284 (486)
Q Consensus 270 ~~~~~I~~FL~~~l~ 284 (486)
++.+.|.+||.+.+.
T Consensus 236 ~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 236 LVTEAVKEFMLEQIA 250 (251)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcc
Confidence 899999999998764
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=233.80 Aligned_cols=206 Identities=17% Similarity=0.204 Sum_probs=152.9
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
++.+.|||+||++++...|..+++.|+++||.|+++|+||||.|++......+.+ ++|+.++++++... .++++|+|
T Consensus 49 G~~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~v~lvG 126 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEER--CDVLFMTG 126 (281)
T ss_dssp CSSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHH--CSEEEEEE
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhC--CCeEEEEE
Confidence 4567799999999999999999999999999999999999999975544444433 78899999998765 47899999
Q ss_pred EcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhC--------------------CchhHHHHHHHHHH
Q 011425 143 RSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRL--------------------PKFTVKMAVQYMRR 201 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~--------------------p~~~~~~~~~~~~~ 201 (486)
|||||.+++.+|..+|+ |+++|+++|................... ...+......+...
T Consensus 127 ~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (281)
T 4fbl_A 127 LSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVPAIKHLITI 206 (281)
T ss_dssp ETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGGGHHHHHHH
T ss_pred ECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchHHHHHHHHh
Confidence 99999999999999998 9999999987653222111111100000 00000001110000
Q ss_pred HHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-CcEEEEeCC-CCCCC---ChHHHHHHHH
Q 011425 202 VIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDG-DHNSS---RPQFYYDSVS 276 (486)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~l~~~~g-gH~~~---~p~~~~~~I~ 276 (486)
. ......+.+|++|+|+|+|++|.++|++.++.+++.++. .++++++++ ||... .++++.+.|.
T Consensus 207 ~-----------~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~ 275 (281)
T 4fbl_A 207 G-----------AVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSL 275 (281)
T ss_dssp H-----------HHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred h-----------hhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHH
Confidence 0 011234667899999999999999999999999999864 568888987 99854 5789999999
Q ss_pred HHHHHh
Q 011425 277 IFFYNV 282 (486)
Q Consensus 277 ~FL~~~ 282 (486)
+||+++
T Consensus 276 ~FL~~H 281 (281)
T 4fbl_A 276 AFIRKH 281 (281)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999874
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-26 Score=218.93 Aligned_cols=228 Identities=16% Similarity=0.176 Sum_probs=151.2
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-H
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-K 119 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~ 119 (486)
++.+.||.+|.|..+ +..++|||+||++++...|..++..|.++||+|+++|+||||.|+.......+.. +
T Consensus 2 ~~~~~~g~~l~y~~~--------G~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a 73 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDW--------GSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFA 73 (271)
T ss_dssp EEECTTSCEEEEEEE--------SSSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHH
T ss_pred eEEcCCCCEEEEEcc--------CCCCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHH
Confidence 367789999998876 2457899999999999999999999998899999999999999986544443322 5
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH------------HHHHHHHHHH---
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL------------FDLMLELVDV--- 182 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~------------~~~~~~~~~~--- 182 (486)
+|+.++++.+ +.++++|+||||||.+++.+++.+ |+ |+++|++++.... ......+...
T Consensus 74 ~d~~~~l~~l----~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T 3ia2_A 74 DDIAQLIEHL----DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHHHHHHHH----TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHh
Confidence 5666666655 668999999999999777666654 65 9999998764310 0111110000
Q ss_pred ------------HhhhC--CchhHHHHHHHHHHHHhhh--h----cccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH
Q 011425 183 ------------YKIRL--PKFTVKMAVQYMRRVIQKK--A----KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (486)
Q Consensus 183 ------------~~~~~--p~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (486)
+.... ................... . .......+....+.++++|+|+|+|++|.++|++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~ 229 (271)
T 3ia2_A 150 DRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFET 229 (271)
T ss_dssp HHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGG
T ss_pred hHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHH
Confidence 00000 0000000000000000000 0 00001123345577899999999999999999987
Q ss_pred HHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 243 SDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 243 ~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
+.++.....+..+++++++ ||... .|+++++.|.+||.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 230 TGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp THHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHHHHhh
Confidence 5555544445678889987 99866 89999999999985
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=220.90 Aligned_cols=228 Identities=17% Similarity=0.180 Sum_probs=156.3
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-H
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-K 119 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~ 119 (486)
.+.+.||.+|.|..+ +.+..|+|||+||++++...|..++..|++ +|+|+++|+||||.|+.......+.. +
T Consensus 8 ~~~~~~g~~l~y~~~------G~~~~p~lvl~hG~~~~~~~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~a 80 (266)
T 3om8_A 8 FLATSDGASLAYRLD------GAAEKPLLALSNSIGTTLHMWDAQLPALTR-HFRVLRYDARGHGASSVPPGPYTLARLG 80 (266)
T ss_dssp EEECTTSCEEEEEEE------SCTTSCEEEEECCTTCCGGGGGGGHHHHHT-TCEEEEECCTTSTTSCCCCSCCCHHHHH
T ss_pred EEeccCCcEEEEEec------CCCCCCEEEEeCCCccCHHHHHHHHHHhhc-CcEEEEEcCCCCCCCCCCCCCCCHHHHH
Confidence 367789999999877 224578999999999999999999988887 79999999999999986544333211 3
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH---HHHHHHHHHHH------------
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---FDLMLELVDVY------------ 183 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~---~~~~~~~~~~~------------ 183 (486)
+|+.++++.+ +.++++|+||||||.+++.+|.++|+ |+++|++++.... ...........
T Consensus 81 ~dl~~~l~~l----~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (266)
T 3om8_A 81 EDVLELLDAL----EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGF 156 (266)
T ss_dssp HHHHHHHHHT----TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSHHHHHHH
T ss_pred HHHHHHHHHh----CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHHHHHHHH
Confidence 4444444443 67899999999999999999999998 9999998764321 11000000000
Q ss_pred -hhhCCchhH---HHHHHHHHHHHhhhh------c-ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC
Q 011425 184 -KIRLPKFTV---KMAVQYMRRVIQKKA------K-FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG 252 (486)
Q Consensus 184 -~~~~p~~~~---~~~~~~~~~~~~~~~------~-~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~ 252 (486)
...++.... ......+...+.... . ......+....+.++++|+|+|+|++|.++|++.++.+.+.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~ 236 (266)
T 3om8_A 157 LGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAG 236 (266)
T ss_dssp HHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT
T ss_pred HHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC
Confidence 000000000 000001111100000 0 00112233456778999999999999999999999999999876
Q ss_pred CcEEEEeCCCCCCC--ChHHHHHHHHHHHH
Q 011425 253 DKNIIKFDGDHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 253 ~~~l~~~~ggH~~~--~p~~~~~~I~~FL~ 280 (486)
.+++++++||+.+ .|+++.+.|.+||.
T Consensus 237 -a~~~~i~~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 237 -ARLVTLPAVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp -CEEEEESCCSCHHHHCHHHHHHHHHHHHT
T ss_pred -CEEEEeCCCCCccccCHHHHHHHHHHHhc
Confidence 4677778999876 89999999999984
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-25 Score=213.10 Aligned_cols=241 Identities=21% Similarity=0.297 Sum_probs=171.8
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC-Ccc-h
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-GWH-E 118 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~-~~~-~ 118 (486)
.+.+.+|.+|.+.+|.|. +.+.|+|||+||++++...|..++..|+++||.|+++|+||||.|.+..... .+. .
T Consensus 21 ~~~~~~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 96 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPT----GTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVF 96 (303)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHHH
T ss_pred eEecCCCeEEEEEEeccC----CCCCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHHH
Confidence 578899999999999774 3567999999999999999999999999999999999999999998654332 222 2
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHH----HH-HhhhCCchh-
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELV----DV-YKIRLPKFT- 191 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~----~~-~~~~~p~~~- 191 (486)
++|+.++++++....+..+++|+||||||.+++.+|..+|+ |+++|+++|............ .. .....+...
T Consensus 97 ~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (303)
T 3pe6_A 97 VRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLPNLSS 176 (303)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHTTCCSCCC
T ss_pred HHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHHhcccccC
Confidence 78999999999887666899999999999999999999997 999999999865432211111 10 000000000
Q ss_pred -------HHHHHHHHHHHHhhhhccc------------ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC
Q 011425 192 -------VKMAVQYMRRVIQKKAKFD------------IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG 252 (486)
Q Consensus 192 -------~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~ 252 (486)
................... ....+....+.++++|+|+|+|++|.+++++.+..+++.++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 256 (303)
T 3pe6_A 177 GPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKS 256 (303)
T ss_dssp CCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCCC
T ss_pred CccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhccc
Confidence 0000000000000000000 000022345677899999999999999999999999999874
Q ss_pred -CcEEEEeCC-CCCCC--ChH---HHHHHHHHHHHHhcCC
Q 011425 253 -DKNIIKFDG-DHNSS--RPQ---FYYDSVSIFFYNVLHP 285 (486)
Q Consensus 253 -~~~l~~~~g-gH~~~--~p~---~~~~~I~~FL~~~l~~ 285 (486)
..+++++++ ||... .++ ++.+.+.+||.+.+..
T Consensus 257 ~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 257 QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 578899998 99876 444 5666788999888754
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=206.31 Aligned_cols=194 Identities=19% Similarity=0.196 Sum_probs=160.7
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCC-----CCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGN-----SGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~-----gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
+++.+.+.+| +|.++++.|. ..++.|+||++||+ ......|..++..|+++||.|+++|+||+|.|.+...
T Consensus 7 ~~~~~~~~~g-~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 82 (208)
T 3trd_A 7 EDFLIQGPVG-QLEVMITRPK---GIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYD 82 (208)
T ss_dssp SCEEEECSSS-EEEEEEECCS---SCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC
T ss_pred ceEEEECCCc-eEEEEEEcCC---CCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCcc
Confidence 5678899999 9999999885 23478999999993 3445557788899999999999999999999987642
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhH
Q 011425 113 SLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTV 192 (486)
Q Consensus 113 ~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~ 192 (486)
. .....+|+.++++++.+..+..+++|+||||||.+++.++ .+|.|+++|+++|+...
T Consensus 83 ~-~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~~v~~~v~~~~~~~~-------------------- 140 (208)
T 3trd_A 83 N-GVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQKVAQLISVAPPVFY-------------------- 140 (208)
T ss_dssp T-TTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHSCCSEEEEESCCTTS--------------------
T ss_pred c-hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccCCccEEEEecccccc--------------------
Confidence 2 2244799999999999987778999999999999999999 77789999999988710
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-ChHH
Q 011425 193 KMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQF 270 (486)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-~p~~ 270 (486)
.....+..+++|+|+++|++|.++|++.+..+++.++...+++++++ ||... ..++
T Consensus 141 ----------------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 198 (208)
T 3trd_A 141 ----------------------EGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRLIE 198 (208)
T ss_dssp ----------------------GGGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTCHHH
T ss_pred ----------------------CCchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccccHHH
Confidence 01133445689999999999999999999999999987789999997 99876 5677
Q ss_pred HHHHHHHHH
Q 011425 271 YYDSVSIFF 279 (486)
Q Consensus 271 ~~~~I~~FL 279 (486)
+.+.|.+||
T Consensus 199 ~~~~i~~fl 207 (208)
T 3trd_A 199 LRELLVRNL 207 (208)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 788888876
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-25 Score=212.67 Aligned_cols=209 Identities=12% Similarity=0.140 Sum_probs=167.7
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCC---Ch--hhHHHHHHHhccCCeEEEEEcCCCCCC
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG---CR--ADANEAAVILLPSNITLFTLDFSGSGL 106 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~--~~~~~~~~~L~~~Gy~Vv~~D~rG~G~ 106 (486)
+.+++.+++.+...+| .|.++++.|. +++.|+||++||+++ .. ..|..++..|+++||.|+++|+||+|.
T Consensus 18 ~~~~e~~~~~~~~~~g-~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~ 92 (249)
T 2i3d_A 18 YFQGHMPEVIFNGPAG-RLEGRYQPSK----EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGR 92 (249)
T ss_dssp ------CEEEEEETTE-EEEEEEECCS----STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred cccCceeEEEEECCCc-eEEEEEEcCC----CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCC
Confidence 3444333888998898 8999888774 356799999999842 22 345778889999999999999999999
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhh
Q 011425 107 SDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKI 185 (486)
Q Consensus 107 S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~ 185 (486)
|.+.... .+...+|+.++++++...... .+++|+||||||.+++.+|..+|+|+++|+++|......
T Consensus 93 s~~~~~~-~~~~~~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~----------- 160 (249)
T 2i3d_A 93 SQGEFDH-GAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAPQPNTYD----------- 160 (249)
T ss_dssp CCSCCCS-SHHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTTEEEEEEESCCTTTSC-----------
T ss_pred CCCCCCC-ccchHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCCccEEEEEcCchhhhh-----------
Confidence 9875432 334468999999999887443 589999999999999999999999999999998865200
Q ss_pred hCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC----CcEEEEeCC
Q 011425 186 RLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG----DKNIIKFDG 261 (486)
Q Consensus 186 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~----~~~l~~~~g 261 (486)
...+..+++|+|+++|+.|.+++++.+..+++.++. ..+++++++
T Consensus 161 -------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 209 (249)
T 2i3d_A 161 -------------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPG 209 (249)
T ss_dssp -------------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETT
T ss_pred -------------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECC
Confidence 134557889999999999999999999999999874 678999998
Q ss_pred -CCCCC-ChHHHHHHHHHHHHHhcCCCCC
Q 011425 262 -DHNSS-RPQFYYDSVSIFFYNVLHPPQI 288 (486)
Q Consensus 262 -gH~~~-~p~~~~~~I~~FL~~~l~~~~~ 288 (486)
+|... .++++.+.|.+||.+.+.....
T Consensus 210 ~~H~~~~~~~~~~~~i~~fl~~~l~~~~~ 238 (249)
T 2i3d_A 210 ANHFFNGKVDELMGECEDYLDRRLNGELV 238 (249)
T ss_dssp CCTTCTTCHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCcccccCHHHHHHHHHHHHHHhcCCCCC
Confidence 99876 6889999999999999875443
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=220.88 Aligned_cols=242 Identities=21% Similarity=0.304 Sum_probs=172.9
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC-Ccc-h
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-GWH-E 118 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~-~~~-~ 118 (486)
.+.+.||..|.+.+|.|. +.+.|+|||+||++++...|..++..|+++||.|+++|+||+|.|.+..... .+. .
T Consensus 39 ~~~~~dg~~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 114 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPT----GTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVF 114 (342)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHHH
T ss_pred eEEccCCeEEEEEEeCCC----CCCCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHHH
Confidence 678899999999999874 3567999999999999999999999999999999999999999998654322 222 2
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH--------HHHHHHHHHhhhCC-
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--------LMLELVDVYKIRLP- 188 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~--------~~~~~~~~~~~~~p- 188 (486)
++|+.++++++....+..+++|+||||||.+++.+|..+|+ |+++|+++|+..... ........+.....
T Consensus 115 ~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (342)
T 3hju_A 115 VRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLVLPNLSL 194 (342)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHHHHCTTCBC
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHHHHhcccccc
Confidence 78999999999888666799999999999999999999997 999999998754211 11111111110000
Q ss_pred -ch---hHHHHHHHHHHHHhhhhccc------------ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC
Q 011425 189 -KF---TVKMAVQYMRRVIQKKAKFD------------IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG 252 (486)
Q Consensus 189 -~~---~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~ 252 (486)
.. .................... ....+....+.++++|+|+|+|++|.+++++.+..+++.++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~ 274 (342)
T 3hju_A 195 GPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKS 274 (342)
T ss_dssp CCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC
T ss_pred CcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCC
Confidence 00 00000000000000000000 000022345677899999999999999999999999999874
Q ss_pred -CcEEEEeCC-CCCCC--ChH---HHHHHHHHHHHHhcCCC
Q 011425 253 -DKNIIKFDG-DHNSS--RPQ---FYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 253 -~~~l~~~~g-gH~~~--~p~---~~~~~I~~FL~~~l~~~ 286 (486)
..+++++++ ||... .++ ++.+.+.+||.+.+...
T Consensus 275 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (342)
T 3hju_A 275 QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 315 (342)
T ss_dssp SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCCC
Confidence 578999998 99976 344 56667889999887543
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=216.02 Aligned_cols=208 Identities=16% Similarity=0.239 Sum_probs=151.9
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh--hhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR--ADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~--~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
.+++.+.+ ..||.+|.+++|+|. +.++.|+||++||++++. ..+..+++.|+++||.|+++|+||||.+.+...
T Consensus 29 ~~e~~~~~-~~dG~~i~g~l~~P~---~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~ 104 (259)
T 4ao6_A 29 VQERGFSL-EVDGRTVPGVYWSPA---EGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQA 104 (259)
T ss_dssp EEEEEEEE-EETTEEEEEEEEEES---SSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC---------
T ss_pred ceEEEEEE-eeCCeEEEEEEEeCC---CCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCccc
Confidence 44455544 479999999999997 345679999999999874 346778899999999999999999999875432
Q ss_pred CCCc--------------------chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCH
Q 011425 113 SLGW--------------------HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDL 172 (486)
Q Consensus 113 ~~~~--------------------~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~ 172 (486)
.... ..+.|..+++++++......+|+++|+||||.+++.++...|+|+++|+..+....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pri~Aav~~~~~~~~ 184 (259)
T 4ao6_A 105 GREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKRIKVALLGLMGVEG 184 (259)
T ss_dssp ----CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTTEEEEEEESCCTTS
T ss_pred ccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCceEEEEEecccccc
Confidence 2110 01346777888887776778999999999999999999999998888775544321
Q ss_pred HHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-
Q 011425 173 FDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA- 251 (486)
Q Consensus 173 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~- 251 (486)
... .+....+.+|++|+|++||++|.+||++.+.++++++.
T Consensus 185 ~~~--------------------------------------~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~ 226 (259)
T 4ao6_A 185 VNG--------------------------------------EDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGT 226 (259)
T ss_dssp TTH--------------------------------------HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC
T ss_pred ccc--------------------------------------cchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCC
Confidence 000 01223455788999999999999999999999999986
Q ss_pred CCcEEEEeCCCCCCCChHHHHHHHHHHHHHhcC
Q 011425 252 GDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 252 ~~~~l~~~~ggH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
..+.+++++|+|......+..+.+.+||+++|+
T Consensus 227 ~~k~l~~~~G~H~~~p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 227 KQKTLHVNPGKHSAVPTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp SSEEEEEESSCTTCCCHHHHTHHHHHHHHHHCC
T ss_pred CCeEEEEeCCCCCCcCHHHHHHHHHHHHHHhcC
Confidence 457889999999877667788999999999885
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=215.26 Aligned_cols=227 Identities=19% Similarity=0.225 Sum_probs=170.1
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC--hhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC--RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~--~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~ 115 (486)
+.+.+ ..+|.+|.++++.|. +.+.|+|||+||++++ ...|..++..|+++||.|+++|+||+|.|.+......
T Consensus 23 ~~~~~-~~~g~~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 97 (270)
T 3pfb_A 23 ATITL-ERDGLQLVGTREEPF----GEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMT 97 (270)
T ss_dssp EEEEE-EETTEEEEEEEEECS----SSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCC
T ss_pred eEEEe-ccCCEEEEEEEEcCC----CCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCccC
Confidence 34444 468999999999885 3458999999999988 5668889999999999999999999999987655554
Q ss_pred cch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCc----
Q 011425 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPK---- 189 (486)
Q Consensus 116 ~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~---- 189 (486)
+.. ++|+.++++++++..+.++++|+||||||.+++.+|..+|+ |+++|+++|...................+.
T Consensus 98 ~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
T 3pfb_A 98 VLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPD 177 (270)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTEECCTTSCCS
T ss_pred HHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhccccCcccccc
Confidence 433 78999999999988777899999999999999999999997 999999999876543221100000000000
Q ss_pred -------hhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-
Q 011425 190 -------FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG- 261 (486)
Q Consensus 190 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g- 261 (486)
.......... ...+....+..+++|+|+++|++|.+++++.+..+.+.++ ..+++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~ 244 (270)
T 3pfb_A 178 RLPFKDLTLGGFYLRIA------------QQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ-NSTLHLIEGA 244 (270)
T ss_dssp EEEETTEEEEHHHHHHH------------HHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS-SEEEEEETTC
T ss_pred cccccccccchhHhhcc------------cccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCC-CCeEEEcCCC
Confidence 0000000000 0113345667889999999999999999999999999875 468888987
Q ss_pred CCCCC--ChHHHHHHHHHHHHHh
Q 011425 262 DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 262 gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
||... .++++.+.|.+||.+.
T Consensus 245 gH~~~~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 245 DHCFSDSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp CTTCCTHHHHHHHHHHHHHHC--
T ss_pred CcccCccchHHHHHHHHHHHhhc
Confidence 99976 5789999999999764
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=216.00 Aligned_cols=228 Identities=16% Similarity=0.187 Sum_probs=152.1
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KD 120 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~ 120 (486)
+.+.+|..|.+..+-| ...|+|||+||++++...|..++..|.++||+|+++|+||||.|+.......+.. ++
T Consensus 4 ~~~~~g~~l~y~~~g~------~~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 77 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGP------RDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYAD 77 (276)
T ss_dssp EECTTSCEEEEEEESC------TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EECCCCcEEEEEecCC------CCCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHH
Confidence 5667999999887733 2457899999999999999999999999999999999999999986543333322 56
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH------------HHHHHHHH------
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL------------FDLMLELV------ 180 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~------------~~~~~~~~------ 180 (486)
|+.++++.+ +.++++|+||||||.+++.+|+.+ |+ |+++|++++.... ......+.
T Consensus 78 d~~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T 1zoi_A 78 DVAAVVAHL----GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASN 153 (276)
T ss_dssp HHHHHHHHH----TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHh----CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHh
Confidence 666666665 567899999999999999988877 76 9999998864210 01111000
Q ss_pred -----HHHhh-h-CC------chhHHHHHHHHHHHHhhh--hcc----cccccchhhhCCCCCCCEEEEEeCCCCCCCHH
Q 011425 181 -----DVYKI-R-LP------KFTVKMAVQYMRRVIQKK--AKF----DIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (486)
Q Consensus 181 -----~~~~~-~-~p------~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 241 (486)
..+.. . .. .........+........ ..+ .....+....+.++++|+|+|+|++|.++|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~ 233 (276)
T 1zoi_A 154 RAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYE 233 (276)
T ss_dssp HHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSCST
T ss_pred HHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccChH
Confidence 00000 0 00 000111111111100000 000 00112333456678999999999999999988
Q ss_pred HH-HHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 242 HS-DLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 242 ~~-~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
.. ..+.+.+ ++.+++++++ ||... .|+++.+.|.+||.
T Consensus 234 ~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 234 NSGVLSAKLL-PNGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp TTHHHHHHHS-TTEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HHHHHHHhhC-CCceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 44 4555555 4578888987 99866 79999999999985
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-25 Score=218.35 Aligned_cols=223 Identities=17% Similarity=0.187 Sum_probs=152.7
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC-CCCCCCCCCCCc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSLGW 116 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~-G~S~~~~~~~~~ 116 (486)
+...+...||..|.++.+.|... .....|+|||+||++++...|..++..|+++||+|+++|+||| |.|++.....++
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~~~ 86 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTM 86 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCH
T ss_pred eEEEEEcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccceeh
Confidence 45667888999999998877421 1235789999999999999999999999999999999999999 999865444443
Q ss_pred ch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhh-----hCCch
Q 011425 117 HE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKI-----RLPKF 190 (486)
Q Consensus 117 ~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~-----~~p~~ 190 (486)
.. ++|+.++++++.. .+..+++|+||||||.+++.+|.. |.|+++|++++................. ..+..
T Consensus 87 ~~~~~D~~~~~~~l~~-~~~~~~~lvGhSmGG~iA~~~A~~-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (305)
T 1tht_A 87 TTGKNSLCTVYHWLQT-KGTQNIGLIAASLSARVAYEVISD-LELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPND 164 (305)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCCEEEEEETHHHHHHHHHTTT-SCCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGGCCSE
T ss_pred HHHHHHHHHHHHHHHh-CCCCceEEEEECHHHHHHHHHhCc-cCcCEEEEecCchhHHHHHHHHhhhhhhhcchhhCccc
Confidence 22 6889999999974 366899999999999999999998 5899999998876654332221110000 00000
Q ss_pred -hH----HHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-CCcEEEEeCC-CC
Q 011425 191 -TV----KMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DH 263 (486)
Q Consensus 191 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~l~~~~g-gH 263 (486)
.. .....+....... .+.. ..+....+.++++|+|+++|++|.++|++.+..+++.++ ...+++++++ ||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH 241 (305)
T 1tht_A 165 LDFEGHKLGSEVFVRDCFEH--HWDT-LDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSH 241 (305)
T ss_dssp EEETTEEEEHHHHHHHHHHT--TCSS-HHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCS
T ss_pred ccccccccCHHHHHHHHHhc--cccc-hhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 00 0000111111110 0000 002235677899999999999999999999999998876 4578999988 99
Q ss_pred CCC
Q 011425 264 NSS 266 (486)
Q Consensus 264 ~~~ 266 (486)
...
T Consensus 242 ~~~ 244 (305)
T 1tht_A 242 DLG 244 (305)
T ss_dssp CTT
T ss_pred chh
Confidence 876
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-25 Score=213.00 Aligned_cols=228 Identities=16% Similarity=0.204 Sum_probs=151.4
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KD 120 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~ 120 (486)
+.+.+|.+|.+..+-| ...|+|||+||++++...|..++..|+++||+|+++|+||||.|+.......+.. ++
T Consensus 3 ~~~~~g~~l~y~~~g~------~~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 76 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGP------RDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAA 76 (275)
T ss_dssp EECTTSCEEEEEEESC------TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EEccCCCEEEEEEcCC------CCCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHH
Confidence 5678999999887733 2457899999999999999999999999999999999999999986543333322 55
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH------------HHHHHHHH------
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL------------FDLMLELV------ 180 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~------------~~~~~~~~------ 180 (486)
|+.++++.+ +.++++|+||||||.+++.+++.+ |+ |+++|++++.... ......+.
T Consensus 77 dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (275)
T 1a88_A 77 DVAALTEAL----DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAAN 152 (275)
T ss_dssp HHHHHHHHH----TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHc----CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhh
Confidence 666666665 567999999999999999988776 76 9999998864210 01111000
Q ss_pred -----HHHhh-h-CC------chhHHHHHHHHHHHHhhh--hcc----cccccchhhhCCCCCCCEEEEEeCCCCCCCHH
Q 011425 181 -----DVYKI-R-LP------KFTVKMAVQYMRRVIQKK--AKF----DIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (486)
Q Consensus 181 -----~~~~~-~-~p------~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 241 (486)
..+.. . .. .........+........ ..+ .....+....+.++++|+|+|+|++|.++|+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 232 (275)
T 1a88_A 153 RAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYA 232 (275)
T ss_dssp HHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCST
T ss_pred HHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCCcH
Confidence 00000 0 00 000111111111100000 000 00011223445678999999999999999988
Q ss_pred HHH-HHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 242 HSD-LIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 242 ~~~-~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
... .+.+.+ ++.+++++++ ||+.. .|+++.+.|.+||.
T Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 233 DAAPKSAELL-ANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp TTHHHHHHHS-TTEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhC-CCcEEEEcCCCCccHHHhCHHHHHHHHHHHhh
Confidence 444 444444 4678889987 99866 79999999999986
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=211.96 Aligned_cols=230 Identities=17% Similarity=0.131 Sum_probs=155.4
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh-hHHHHHHHhccCCeEEEEEcCCCCCCCCC-CCC--CC
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDG-DYV--SL 114 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~-~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~-~~~--~~ 114 (486)
+..+...+|.++++..+-| ...|+|||+||++++.. .|..++..|. .+|+|+++|+||||.|+. ... ..
T Consensus 4 ~~~~~~~~g~~l~~~~~G~------~~~~~vvllHG~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~ 76 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGP------VEGPALFVLHGGPGGNAYVLREGLQDYL-EGFRVVYFDQRGSGRSLELPQDPRLF 76 (286)
T ss_dssp EEEEEECSSCEEEEEEESC------TTSCEEEEECCTTTCCSHHHHHHHGGGC-TTSEEEEECCTTSTTSCCCCSCGGGC
T ss_pred ceeEEeECCEEEEEEeecC------CCCCEEEEECCCCCcchhHHHHHHHHhc-CCCEEEEECCCCCCCCCCCccCcccC
Confidence 3455667899999888733 24689999999999999 8999998885 489999999999999986 322 22
Q ss_pred Ccch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHH--------------
Q 011425 115 GWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLEL-------------- 179 (486)
Q Consensus 115 ~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~-------------- 179 (486)
.... ++|+.++++.+ +.++++|+||||||.+|+.+|.++|+|+++|++++...........
T Consensus 77 ~~~~~a~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (286)
T 2yys_A 77 TVDALVEDTLLLAEAL----GVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEE 152 (286)
T ss_dssp CHHHHHHHHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHCTTEEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHH
T ss_pred cHHHHHHHHHHHHHHh----CCCcEEEEEeCHHHHHHHHHHHhCcchheEEEeCCccCcHHHHHHHHHHhccccchhHHH
Confidence 2211 44444444444 6789999999999999999999998899999999876432211111
Q ss_pred --HHHHhhhCCchhHHH----------HHHHHHHHHhhh---------hcccccccchhhhCCCCCCCEEEEEeCCCCCC
Q 011425 180 --VDVYKIRLPKFTVKM----------AVQYMRRVIQKK---------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFI 238 (486)
Q Consensus 180 --~~~~~~~~p~~~~~~----------~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 238 (486)
........+...... ............ ........+....+.++++|+|+|+|++|.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 232 (286)
T 2yys_A 153 NLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTS 232 (286)
T ss_dssp HHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTT
T ss_pred HHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcC
Confidence 000000000000000 000000000000 00011122344567889999999999999999
Q ss_pred CHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 239 RARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 239 p~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
+++ ++.+.+ +++ .+++++++ ||+.. .|+++++.|.+||.+.
T Consensus 233 ~~~-~~~~~~-~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 233 YPY-AEEVAS-RLR-APIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp TTT-HHHHHH-HHT-CCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred CHh-HHHHHh-CCC-CCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 999 888888 754 46778886 99976 7999999999999864
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=213.04 Aligned_cols=226 Identities=15% Similarity=0.154 Sum_probs=149.0
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KD 120 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~ 120 (486)
+.+.+|.+|.+..+ +..|+|||+||++++...|..++..|+++||+|+++|+||||.|+.......+.. ++
T Consensus 3 ~~~~~g~~l~y~~~--------g~~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (273)
T 1a8s_A 3 FTTRDGTQIYYKDW--------GSGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYAD 74 (273)
T ss_dssp EECTTSCEEEEEEE--------SCSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EecCCCcEEEEEEc--------CCCCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHH
Confidence 56789999988766 2457899999999999999999999999999999999999999986543333221 44
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH------------HHHHHHH-------
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL------------FDLMLEL------- 179 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~------------~~~~~~~------- 179 (486)
|+.++++.+ +.++++|+||||||.+++.+++.+ |+ |+++|++++.... ......+
T Consensus 75 dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
T 1a8s_A 75 DLAQLIEHL----DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLAD 150 (273)
T ss_dssp HHHHHHHHT----TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhh
Confidence 555555544 668999999999999999987775 76 9999998863210 0111000
Q ss_pred ----HHHHhh-hC-C----c--hhHHHHHHHHHHHHhhh--hcc----cccccchhhhCCCCCCCEEEEEeCCCCCCCHH
Q 011425 180 ----VDVYKI-RL-P----K--FTVKMAVQYMRRVIQKK--AKF----DIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (486)
Q Consensus 180 ----~~~~~~-~~-p----~--~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 241 (486)
...+.. .. . . ........++....... ..+ .....+....+.++++|+|+|+|++|.++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 230 (273)
T 1a8s_A 151 RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIE 230 (273)
T ss_dssp HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCST
T ss_pred HHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCChH
Confidence 000000 00 0 0 00111111111100000 000 00111233456688999999999999999988
Q ss_pred HH-HHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 242 HS-DLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 242 ~~-~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
.. ..+.+.+ ++.+++++++ ||+.. .|+++.+.|.+||.
T Consensus 231 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 231 ASGIASAALV-KGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp TTHHHHHHHS-TTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCcEEEEeCCCCCcchhhCHHHHHHHHHHHHh
Confidence 44 4444555 4578888987 99866 79999999999986
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=216.87 Aligned_cols=234 Identities=18% Similarity=0.134 Sum_probs=175.3
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
+.+..+.+.+.. +|..|.+++|.|. +.|+|||+||++++...|..++..|+++||.|+++|+||+|.|.+...
T Consensus 2 m~~~~~~~~~~~-~g~~l~~~~~~p~------~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~ 74 (290)
T 3ksr_A 2 MEAKLSSIEIPV-GQDELSGTLLTPT------GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQ 74 (290)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEEEEEE------SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTT
T ss_pred CCCceeeEEecC-CCeEEEEEEecCC------CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcc
Confidence 455667788876 8899999999874 679999999999999999999999999999999999999999987654
Q ss_pred CCCcch-HHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCc
Q 011425 113 SLGWHE-KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPK 189 (486)
Q Consensus 113 ~~~~~~-~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~ 189 (486)
...+.. ++|+.++++++...... .+++|+||||||.+++.++..+| ++++++++|....... ...+.
T Consensus 75 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~-~~~~~l~~p~~~~~~~---------~~~~~ 144 (290)
T 3ksr_A 75 SVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP-VEWLALRSPALYKDAH---------WDQPK 144 (290)
T ss_dssp TCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC-CSEEEEESCCCCCSSC---------TTSBH
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC-CCEEEEeCcchhhhhh---------hhccc
Confidence 444332 78999999999887543 58999999999999999999998 9999999887642110 00111
Q ss_pred hhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCC--cEEEEeCC-CCCCC
Q 011425 190 FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD--KNIIKFDG-DHNSS 266 (486)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~--~~l~~~~g-gH~~~ 266 (486)
..... ...+.... .........+....+.++++|+|+++|+.|.+++++.+..+++.++.. .+++++++ ||...
T Consensus 145 ~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 221 (290)
T 3ksr_A 145 VSLNA-DPDLMDYR--RRALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALS 221 (290)
T ss_dssp HHHHH-STTHHHHT--TSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCC
T ss_pred ccccC-Chhhhhhh--hhhhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCC
Confidence 10000 00000000 001111122334455678899999999999999999999999998643 56888887 99865
Q ss_pred ---ChHHHHHHHHHHHHHhcCCC
Q 011425 267 ---RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 267 ---~p~~~~~~I~~FL~~~l~~~ 286 (486)
.++.+.+.+.+||.+++...
T Consensus 222 ~~~~~~~~~~~i~~fl~~~~~~~ 244 (290)
T 3ksr_A 222 VKEHQQEYTRALIDWLTEMVVGR 244 (290)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cchHHHHHHHHHHHHHHHHhcCC
Confidence 46789999999999988644
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.4e-25 Score=211.07 Aligned_cols=226 Identities=15% Similarity=0.150 Sum_probs=148.2
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KD 120 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~ 120 (486)
+.+.+|.+|.+..+ +..|+|||+||++++...|..++..|.+.||+|+++|+||||.|........+.. ++
T Consensus 3 ~~~~~g~~l~y~~~--------g~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (274)
T 1a8q_A 3 CTTRDGVEIFYKDW--------GQGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFAD 74 (274)
T ss_dssp EECTTSCEEEEEEE--------CSSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EEccCCCEEEEEec--------CCCceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHH
Confidence 56789999988776 2457899999999999999999999999999999999999999986543333222 45
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH------------HHHHHHHHH-----
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL------------FDLMLELVD----- 181 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~------------~~~~~~~~~----- 181 (486)
|+.++++.+ +.++++|+||||||.+++.+|+.+ |+ |+++|++++.... ......+..
T Consensus 75 dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (274)
T 1a8q_A 75 DLNDLLTDL----DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTE 150 (274)
T ss_dssp HHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc----CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhcc
Confidence 555555544 568999999999999999988775 76 9999998863210 011110000
Q ss_pred ----------HHhh-hCCc--hhHHHHHHHHHHHHhhh--hcc----cccccchhhhCCCCCCCEEEEEeCCCCCCCHHH
Q 011425 182 ----------VYKI-RLPK--FTVKMAVQYMRRVIQKK--AKF----DIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (486)
Q Consensus 182 ----------~~~~-~~p~--~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (486)
.+.. ..+. ........++....... ..+ .....+....+.++++|+|+|+|++|.++|++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 230 (274)
T 1a8q_A 151 RSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDA 230 (274)
T ss_dssp HHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGG
T ss_pred HHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcHH
Confidence 0000 0000 00011111111000000 000 001123345567899999999999999999885
Q ss_pred HH-HHHHHcCCCcEEEEeCC-CCCCC----ChHHHHHHHHHHHH
Q 011425 243 SD-LIFNAYAGDKNIIKFDG-DHNSS----RPQFYYDSVSIFFY 280 (486)
Q Consensus 243 ~~-~l~~~l~~~~~l~~~~g-gH~~~----~p~~~~~~I~~FL~ 280 (486)
.. .+.+.+ ++.+++++++ ||+.. .|+++.+.|.+||.
T Consensus 231 ~~~~~~~~~-~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 231 TGRKSAQII-PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp THHHHHHHS-TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred HHHHHHhhC-CCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 44 444555 4578888987 99865 37899999999985
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-25 Score=212.12 Aligned_cols=224 Identities=17% Similarity=0.152 Sum_probs=153.1
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl 122 (486)
..+|.+|.+..+ + ..++|||+||++++...|..++..|+++||+|+++|+||||.|+.......+.. ++|+
T Consensus 9 ~~~g~~l~y~~~------g--~g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl 80 (277)
T 1brt_A 9 NSTSIDLYYEDH------G--TGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADL 80 (277)
T ss_dssp TTEEEEEEEEEE------C--SSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred cCCCcEEEEEEc------C--CCCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHH
Confidence 567888887765 2 345699999999999999999999999999999999999999986543333322 5666
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC--ccEEEEcCCccCH-------------HHHHHHHHHHHh---
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDL-------------FDLMLELVDVYK--- 184 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~--v~~lVl~sp~~~~-------------~~~~~~~~~~~~--- 184 (486)
.++++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++.... ...+..+.....
T Consensus 81 ~~~l~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
T 1brt_A 81 NTVLETL----DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADR 156 (277)
T ss_dssp HHHHHHH----TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHh----CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCc
Confidence 6666665 56899999999999999999999985 9999999863210 011111100000
Q ss_pred ---------hhCC-------chhHHHHHHHHHHHHhhh-----hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHH
Q 011425 185 ---------IRLP-------KFTVKMAVQYMRRVIQKK-----AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHS 243 (486)
Q Consensus 185 ---------~~~p-------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 243 (486)
.... .........+........ ........+....+.++++|+|+|+|++|.++|++.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 236 (277)
T 1brt_A 157 YAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENT 236 (277)
T ss_dssp HHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGT
T ss_pred hhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHH
Confidence 0000 000111111111110000 0000002233445678899999999999999999888
Q ss_pred -HHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 244 -DLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 244 -~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
..+.+.++ +.+++++++ ||+.. .|+++.+.|.+||.
T Consensus 237 ~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 237 ARVFHKALP-SAEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276 (277)
T ss_dssp HHHHHHHCT-TSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHCC-CCcEEEeCCCCcchhhhCHHHHHHHHHHHHh
Confidence 88888875 467888887 99866 79999999999986
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=214.35 Aligned_cols=231 Identities=16% Similarity=0.134 Sum_probs=149.1
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~ 117 (486)
..+...+.+|..|+|..+ +..++|||+||++++...|..++..|.++||+|+++|+||||.|+.......+
T Consensus 7 ~~~~~~~~~g~~l~y~~~--------G~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~- 77 (281)
T 3fob_A 7 ITVGTENQAPIEIYYEDH--------GTGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEY- 77 (281)
T ss_dssp EEEEEETTEEEEEEEEEE--------SSSEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSH-
T ss_pred EEecCCCCCceEEEEEEC--------CCCCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCH-
Confidence 344455678888887665 34578999999999999999999999888999999999999999865443332
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH------------H-HHHHHHHH-
Q 011425 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL------------F-DLMLELVD- 181 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~------------~-~~~~~~~~- 181 (486)
+++.+.+..+.+..+.++++|+||||||.+++.+++.+ |+ |+++|++++.... . .....+..
T Consensus 78 --~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (281)
T 3fob_A 78 --DTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSG 155 (281)
T ss_dssp --HHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHH
Confidence 33333333333444778999999999999888776664 66 9999998754210 0 10100000
Q ss_pred ----------HH-hhhCC-----chhHHHHHHHHHHHHhh-------hhcccccccchhhhCCCCCCCEEEEEeCCCCCC
Q 011425 182 ----------VY-KIRLP-----KFTVKMAVQYMRRVIQK-------KAKFDIMDLNCLKLAPKTFIPALFGHASEDKFI 238 (486)
Q Consensus 182 ----------~~-~~~~p-----~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 238 (486)
.+ ..... ................. .........+....+.++++|+|+|+|++|.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~ 235 (281)
T 3fob_A 156 VINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATV 235 (281)
T ss_dssp HHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred hhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCc
Confidence 00 00000 00000000000000000 000001112344567889999999999999999
Q ss_pred CHHHH-HHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 239 RARHS-DLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 239 p~~~~-~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
|++.+ ..+.+.++ +.+++++++ ||+.. .|+++.+.|.+||.
T Consensus 236 p~~~~~~~~~~~~p-~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 236 PFEYSGKLTHEAIP-NSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp CGGGTHHHHHHHST-TCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCC-CceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 99866 55556664 467888887 99976 89999999999985
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=201.46 Aligned_cols=203 Identities=20% Similarity=0.211 Sum_probs=165.6
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---C--ChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---G--CRADANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g--~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
..+.+.+.+.+| .+.+++|.|.+. ...+.|+||++||++ + ....|..++..|+++||.|+++|+||+|.|.+.
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 86 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPD-VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS 86 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTT-SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCC-CccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC
Confidence 447788999999 899999988631 014589999999953 2 334467788999999999999999999999876
Q ss_pred CCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCch
Q 011425 111 YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKF 190 (486)
Q Consensus 111 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~ 190 (486)
... .....+|+.++++++....+..+++++||||||.+++.++..+ .|+++|+++|......
T Consensus 87 ~~~-~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~v~~~v~~~~~~~~~~---------------- 148 (220)
T 2fuk_A 87 FDH-GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL-EPQVLISIAPPAGRWD---------------- 148 (220)
T ss_dssp CCT-TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH-CCSEEEEESCCBTTBC----------------
T ss_pred ccc-CchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc-cccEEEEecccccchh----------------
Confidence 532 2234899999999999887668999999999999999999988 8999999999875311
Q ss_pred hHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-Ch
Q 011425 191 TVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RP 268 (486)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-~p 268 (486)
+ ..+. ..+|+|+++|++|.+++++.+..+++.+....+++++++ +|... .+
T Consensus 149 ------------------~--------~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 201 (220)
T 2fuk_A 149 ------------------F--------SDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHRKL 201 (220)
T ss_dssp ------------------C--------TTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTTCH
T ss_pred ------------------h--------hhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehhhH
Confidence 0 1111 257999999999999999999999999876788999987 99876 67
Q ss_pred HHHHHHHHHHHHHhcCC
Q 011425 269 QFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 269 ~~~~~~I~~FL~~~l~~ 285 (486)
+++.+.+.+||.+++..
T Consensus 202 ~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 202 IDLRGALQHGVRRWLPA 218 (220)
T ss_dssp HHHHHHHHHHHGGGCSS
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 88999999999998753
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-24 Score=204.26 Aligned_cols=226 Identities=20% Similarity=0.207 Sum_probs=151.6
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC-hhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc-hHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC-RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH-EKDDL 122 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~-~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~-~~~Dl 122 (486)
.+|..|.+..+- ...|+|||+||++++ ...|..++..|.++||+|+++|+||||.|+......... ..+++
T Consensus 9 ~~g~~l~~~~~g-------~~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 81 (254)
T 2ocg_A 9 VNGVQLHYQQTG-------EGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDA 81 (254)
T ss_dssp ETTEEEEEEEEE-------CCSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHHHHHH
T ss_pred ECCEEEEEEEec-------CCCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHHHHHH
Confidence 478888877652 124689999999988 667888999999989999999999999997543333311 13455
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHh--hhCCc-hh-------
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYK--IRLPK-FT------- 191 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~--~~~p~-~~------- 191 (486)
.++++++... +..+++|+||||||.+|+.+|.++|+ |+++|++++................ ..... ..
T Consensus 82 ~~~~~~l~~l-~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (254)
T 2ocg_A 82 KDAVDLMKAL-KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALY 160 (254)
T ss_dssp HHHHHHHHHT-TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 5666666544 56899999999999999999999998 9999999875432111111100000 00000 00
Q ss_pred -HHHHHHHHHHHHhhhhcc-cc-cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-
Q 011425 192 -VKMAVQYMRRVIQKKAKF-DI-MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS- 266 (486)
Q Consensus 192 -~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~- 266 (486)
.................+ .. ........+.++++|+|+|+|++|.++|++.+..+.+.+++ .+++++++ ||+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 239 (254)
T 2ocg_A 161 GYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG-SRLHLMPEGKHNLHL 239 (254)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT-CEEEEETTCCTTHHH
T ss_pred cchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCC-CEEEEcCCCCCchhh
Confidence 000000001111000000 00 00112345678999999999999999999999999988865 57888886 99866
Q ss_pred -ChHHHHHHHHHHH
Q 011425 267 -RPQFYYDSVSIFF 279 (486)
Q Consensus 267 -~p~~~~~~I~~FL 279 (486)
.|+++.+.|.+||
T Consensus 240 e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 240 RFADEFNKLAEDFL 253 (254)
T ss_dssp HTHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHh
Confidence 7899999999998
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-24 Score=210.34 Aligned_cols=241 Identities=16% Similarity=0.191 Sum_probs=174.0
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC-hhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC-RADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~-~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
.+..+++.+.+.+|..|.+++|.|.+ .++.|+||++||++++ ...|.... .|+++||.|+++|+||+|.+...+.
T Consensus 53 ~~~~~~~~~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~rg~g~s~~~~~ 128 (318)
T 1l7a_A 53 GVKVYRLTYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASYDGEIHEMV-NWALHGYATFGMLVRGQQRSEDTSI 128 (318)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCSGGGHHHHH-HHHHTTCEEEEECCTTTSSSCCCCC
T ss_pred CeEEEEEEEEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCCCCCCccccc-chhhCCcEEEEecCCCCCCCCCccc
Confidence 34567888988899999999999964 4578999999999999 88777665 7777899999999999999986532
Q ss_pred C----------CCc---------chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccC
Q 011425 113 S----------LGW---------HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD 171 (486)
Q Consensus 113 ~----------~~~---------~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~ 171 (486)
. .++ ..++|+.++++++.++... .+|+|+||||||.+++.+|..+|++.++|+.+|+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~v~~~p~~~ 208 (318)
T 1l7a_A 129 SPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLS 208 (318)
T ss_dssp CSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSCCSEEEEESCCSC
T ss_pred ccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCCccEEEecCCccc
Confidence 1 000 1278999999999987544 789999999999999999999999999999888654
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHH-HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMR-RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 172 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
......... ...+............ ..............+....+.++++|+|+++|+.|.++|++.+..+++.+
T Consensus 209 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l 284 (318)
T 1l7a_A 209 NFERAIDVA----LEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHL 284 (318)
T ss_dssp CHHHHHHHC----CSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred CHHHHHhcC----CcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhc
Confidence 322111110 0011111110000000 00000000011112344556678899999999999999999999999999
Q ss_pred CCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 251 AGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 251 ~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
...++++++++ ||.. ..++.+.+.+||.+++.
T Consensus 285 ~~~~~~~~~~~~~H~~--~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 285 ETKKELKVYRYFGHEY--IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp CSSEEEEEETTCCSSC--CHHHHHHHHHHHHHHHC
T ss_pred CCCeeEEEccCCCCCC--cchhHHHHHHHHHHHhC
Confidence 87788999998 9993 46788999999998875
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=212.86 Aligned_cols=214 Identities=21% Similarity=0.242 Sum_probs=145.6
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
.|+|||+||++++...|..++..|.++||+|+++|+||||.|........... ++|+.++++++... +.++++|+|||
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~lvG~S 94 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLS 94 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEET
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHc-CCCeEEEEEeC
Confidence 57899999999999999999999988899999999999997754322223222 46677777777665 56899999999
Q ss_pred chHHHHHHHHhcCCCccEEEEcCCccC---HHHHHH---HHHHHHhhhCCchhHHHHHHHHHHHHhhhh----ccccccc
Q 011425 145 MGAVTSLLYGAEDPSIAGMVLDSAFSD---LFDLML---ELVDVYKIRLPKFTVKMAVQYMRRVIQKKA----KFDIMDL 214 (486)
Q Consensus 145 mGG~lAl~~A~~~p~v~~lVl~sp~~~---~~~~~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~ 214 (486)
|||.+++.+|.++| |+++|+++++.. ...... .....+.... ................... .+.....
T Consensus 95 mGG~ia~~~a~~~p-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (247)
T 1tqh_A 95 LGGVFSLKLGYTVP-IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKRE-GKSEEQIEQEMEKFKQTPMKTLKALQELIA 172 (247)
T ss_dssp HHHHHHHHHHTTSC-CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHH-TCCHHHHHHHHHHHTTSCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCeEEEEcceeecCcchhhhHHHHHHHHHhhccc-ccchHHHHhhhhcccCCCHHHHHHHHHHHH
Confidence 99999999999999 999998765433 111110 0111000000 0000000111110000000 0000001
Q ss_pred chhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-CcEEEEeCC-CCCCC---ChHHHHHHHHHHHHHh
Q 011425 215 NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 215 ~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~~~ 282 (486)
+....+.++++|+|+|+|++|.++|++.++.+++.+++ ..+++++++ ||... .++++.+.|.+||.+.
T Consensus 173 ~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 173 DVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred HHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 23456678899999999999999999999999999975 468889987 99965 3689999999999863
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-24 Score=209.07 Aligned_cols=227 Identities=15% Similarity=0.141 Sum_probs=152.5
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH-HHHHhccCCeEEEEEcCCCCCCCCCC---CCCCCcch-
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-AAVILLPSNITLFTLDFSGSGLSDGD---YVSLGWHE- 118 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~-~~~~L~~~Gy~Vv~~D~rG~G~S~~~---~~~~~~~~- 118 (486)
..+|.+|.+..+-+ ...|+|||+||++++...|.. ++..|.++||+|+++|+||||.|+.. .....+..
T Consensus 7 ~~~g~~l~y~~~G~------~~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~ 80 (298)
T 1q0r_A 7 PSGDVELWSDDFGD------PADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGEL 80 (298)
T ss_dssp EETTEEEEEEEESC------TTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHH
T ss_pred ccCCeEEEEEeccC------CCCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHH
Confidence 35899999887732 345799999999999999976 55889998999999999999999862 11122211
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc-CH--H---------------------
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS-DL--F--------------------- 173 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~-~~--~--------------------- 173 (486)
++|+.++++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++.. .. .
T Consensus 81 a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (298)
T 1q0r_A 81 AADAVAVLDGW----GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQ 156 (298)
T ss_dssp HHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCH
T ss_pred HHHHHHHHHHh----CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccH
Confidence 34444444444 67899999999999999999999998 99999988654 21 0
Q ss_pred HHHHHHHHHHh-----------------h-hCCc--hhHHHHHHHHHHHHhhh---hcc--c----ccccchhhh-CCCC
Q 011425 174 DLMLELVDVYK-----------------I-RLPK--FTVKMAVQYMRRVIQKK---AKF--D----IMDLNCLKL-APKT 223 (486)
Q Consensus 174 ~~~~~~~~~~~-----------------~-~~p~--~~~~~~~~~~~~~~~~~---~~~--~----~~~~~~~~~-l~~i 223 (486)
..+..+..... . ..+. ........+....+... ..+ . ....+.... +.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 236 (298)
T 1q0r_A 157 PFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREV 236 (298)
T ss_dssp HHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGC
T ss_pred HHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCccccccccccc
Confidence 01111110000 0 0000 01111111111111111 000 0 011233445 7889
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 011425 224 FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l 283 (486)
++|+|+|+|++|.++|++.++.+.+.+++ .+++++++ || ..|+++.+.|.+||.++.
T Consensus 237 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH--e~p~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 237 TVPTLVIQAEHDPIAPAPHGKHLAGLIPT-ARLAEIPGMGH--ALPSSVHGPLAEVILAHT 294 (298)
T ss_dssp CSCEEEEEETTCSSSCTTHHHHHHHTSTT-EEEEEETTCCS--SCCGGGHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCccCCHHHHHHHHHhCCC-CEEEEcCCCCC--CCcHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888754 67888887 99 567899999999998764
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=209.81 Aligned_cols=228 Identities=18% Similarity=0.217 Sum_probs=153.4
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl 122 (486)
..+|.+|.|..+-+. +.+.|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.......+.. ++|+
T Consensus 8 ~~~g~~l~y~~~g~~----~~~~~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 82 (266)
T 2xua_A 8 AVNGTELHYRIDGER----HGNAPWIVLSNSLGTDLSMWAPQVAALSK-HFRVLRYDTRGHGHSEAPKGPYTIEQLTGDV 82 (266)
T ss_dssp ECSSSEEEEEEESCS----SSCCCEEEEECCTTCCGGGGGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCCHHHHHHHH
T ss_pred EECCEEEEEEEcCCc----cCCCCeEEEecCccCCHHHHHHHHHHHhc-CeEEEEecCCCCCCCCCCCCCCCHHHHHHHH
Confidence 358999998877331 11268999999999999999999988876 59999999999999986543333221 4455
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH--HHHHHH------------HHHHH-hhh
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL--FDLMLE------------LVDVY-KIR 186 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~--~~~~~~------------~~~~~-~~~ 186 (486)
.++++.+ +.++++|+||||||.+++.+|.++|+ |+++|++++.... ...+.. ..... ...
T Consensus 83 ~~~l~~l----~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (266)
T 2xua_A 83 LGLMDTL----KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALADAVLPRW 158 (266)
T ss_dssp HHHHHHT----TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHhc----CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 5555444 66899999999999999999999997 9999999875431 110000 00000 000
Q ss_pred CCc-hhH--HHHHHHHHHHHhhh--hcc-----cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEE
Q 011425 187 LPK-FTV--KMAVQYMRRVIQKK--AKF-----DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI 256 (486)
Q Consensus 187 ~p~-~~~--~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l 256 (486)
... +.. ......+...+... ..+ .....+....+.++++|+|+|+|++|.++|++.++.+.+.+++ .++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~ 237 (266)
T 2xua_A 159 FTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAG-ARY 237 (266)
T ss_dssp SCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT-CEE
T ss_pred cCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCC-CEE
Confidence 000 000 00001111111000 000 0001233455678899999999999999999999999998865 467
Q ss_pred EEeCCCCCCC--ChHHHHHHHHHHHHH
Q 011425 257 IKFDGDHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 257 ~~~~ggH~~~--~p~~~~~~I~~FL~~ 281 (486)
+++++||+.. .|+++.+.|.+||.+
T Consensus 238 ~~~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 238 VELDASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp EEESCCSSHHHHTHHHHHHHHHHHHTC
T ss_pred EEecCCCCchhcCHHHHHHHHHHHHHh
Confidence 7777999866 789999999999964
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-25 Score=219.46 Aligned_cols=236 Identities=18% Similarity=0.236 Sum_probs=174.7
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
+..+++.+.+.+|..|.+++|.|.+ .++.|+||++||++++...|..+. .++..||.|+++|+||+|.+.......
T Consensus 80 ~~~~~~~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~ 155 (346)
T 3fcy_A 80 AECYDLYFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNSGDWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGV 155 (346)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCSCCSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCC
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCCCChhhhh-HHHhCCcEEEEEcCCCCCCCCCCCccc
Confidence 4557899999999999999999973 467899999999999988887766 555779999999999999887553221
Q ss_pred ---------------C-----c-chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccC
Q 011425 115 ---------------G-----W-HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD 171 (486)
Q Consensus 115 ---------------~-----~-~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~ 171 (486)
. + ..++|+.++++++...... ++|+|+|||+||.+++.+|..+|+|+++|+++|+..
T Consensus 156 ~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~v~~~vl~~p~~~ 235 (346)
T 3fcy_A 156 TGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFLS 235 (346)
T ss_dssp SSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTCCEEEEESCSSC
T ss_pred CCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCccccEEEECCCccc
Confidence 0 0 1158999999999887543 789999999999999999999999999999999765
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHh-----hhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHH
Q 011425 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQ-----KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLI 246 (486)
Q Consensus 172 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l 246 (486)
....... .............++..... ..........+....+.++++|+|+++|+.|.+++++.+..+
T Consensus 236 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~ 309 (346)
T 3fcy_A 236 DYKRVWD------LDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAA 309 (346)
T ss_dssp CHHHHHH------TTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHH
T ss_pred CHHHHhh------ccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHH
Confidence 3221111 01111111111111111000 000001112245566778899999999999999999999999
Q ss_pred HHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHh
Q 011425 247 FNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 247 ~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~ 282 (486)
++.+...++++++++ ||... +++.+.+.+||.+.
T Consensus 310 ~~~~~~~~~~~~~~~~gH~~~--~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 310 YNNIQSKKDIKVYPDYGHEPM--RGFGDLAMQFMLEL 344 (346)
T ss_dssp HTTCCSSEEEEEETTCCSSCC--TTHHHHHHHHHHTT
T ss_pred HHhcCCCcEEEEeCCCCCcCH--HHHHHHHHHHHHHh
Confidence 999877789999998 99987 78899999999864
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-24 Score=206.72 Aligned_cols=242 Identities=14% Similarity=0.119 Sum_probs=161.9
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
++..+.+.+. .+|..+....+.+.. ..+..|+|||+||++++...|..++..|.++||.|+++|+||+|.|......
T Consensus 17 ~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 93 (315)
T 4f0j_A 17 AYPVHYLDFT-SQGQPLSMAYLDVAP--KKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHY 93 (315)
T ss_dssp SSCCEEEEEE-ETTEEEEEEEEEECC--SSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC
T ss_pred CccceeEEEe-cCCCCeeEEEeecCC--CCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCcc
Confidence 3444566664 355555554444321 3467899999999999999999999999999999999999999999865441
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH------------HHHH---
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------------DLML--- 177 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~------------~~~~--- 177 (486)
. ...+++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|+++|..... ....
T Consensus 94 ~--~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
T 4f0j_A 94 Q--YSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDL 171 (315)
T ss_dssp C--CCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHT
T ss_pred c--cCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcc
Confidence 1 2246666666666666577899999999999999999999997 99999999864211 0000
Q ss_pred --------HHHHHHh-hhCCchhHHHHHHHHHHHHhhh-----------hcccccccchhhhCCCCCCCEEEEEeCCCCC
Q 011425 178 --------ELVDVYK-IRLPKFTVKMAVQYMRRVIQKK-----------AKFDIMDLNCLKLAPKTFIPALFGHASEDKF 237 (486)
Q Consensus 178 --------~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~ 237 (486)
....... ...................... ........+....+.++++|+|+++|++|.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~ 251 (315)
T 4f0j_A 172 QTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNT 251 (315)
T ss_dssp TCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCC
T ss_pred cCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCc
Confidence 0000000 0000000000011110000000 0000011123445778899999999999999
Q ss_pred CC----------------HHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 238 IR----------------ARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 238 vp----------------~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+| .+.+..+.+.++ ..+++++++ ||+.. .++++.+.|.+||.+
T Consensus 252 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 252 AIGKDAAPAELKARLGNYAQLGKDAARRIP-QATLVEFPDLGHTPQIQAPERFHQALLEGLQT 313 (315)
T ss_dssp CTTGGGSCHHHHTTSCCHHHHHHHHHHHST-TEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC
T ss_pred CccccccccccccccccchhhhhHHHhhcC-CceEEEeCCCCcchhhhCHHHHHHHHHHHhcc
Confidence 99 788888888875 567888887 99866 789999999999865
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-24 Score=203.78 Aligned_cols=233 Identities=15% Similarity=0.188 Sum_probs=161.6
Q ss_pred CcceeEEEEEE-EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH--HHHHHhccCCeEEEEEcCCCCCCCC
Q 011425 32 GRSYKRQDLEI-RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN--EAAVILLPSNITLFTLDFSGSGLSD 108 (486)
Q Consensus 32 ~~~~~~~~i~~-~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~--~~~~~L~~~Gy~Vv~~D~rG~G~S~ 108 (486)
+.+.+.+.+.+ .+.||..|.+..+.+. +...|+|||+||++++...|. .+...|.+.||.|+++|+||+|.|.
T Consensus 6 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 81 (270)
T 3llc_A 6 GRPIETHAITVGQGSDARSIAALVRAPA----QDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASG 81 (270)
T ss_dssp -CCEEEEEEEESSGGGCEEEEEEEECCS----STTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCC
T ss_pred CCCCCcceEEEeeccCcceEEEEeccCC----CCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCC
Confidence 34455556666 6679999998877543 234799999999999866543 3677777889999999999999998
Q ss_pred CCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc---CC---C-ccEEEEcCCccCHHHHHHHHH
Q 011425 109 GDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE---DP---S-IAGMVLDSAFSDLFDLMLELV 180 (486)
Q Consensus 109 ~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~---~p---~-v~~lVl~sp~~~~~~~~~~~~ 180 (486)
+......+.+ ++|+.++++++ ...+++|+||||||.+++.+|.. +| . |+++|+++|.........
T Consensus 82 ~~~~~~~~~~~~~d~~~~~~~l----~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~--- 154 (270)
T 3llc_A 82 GAFRDGTISRWLEEALAVLDHF----KPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI--- 154 (270)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHH----CCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT---
T ss_pred CccccccHHHHHHHHHHHHHHh----ccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh---
Confidence 7665554433 66777777776 46899999999999999999999 98 6 999999999877543210
Q ss_pred HHHhhhCCchhHHHHHHHHHHHHhhh-hcc-------------cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHH
Q 011425 181 DVYKIRLPKFTVKMAVQYMRRVIQKK-AKF-------------DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLI 246 (486)
Q Consensus 181 ~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~-------------~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l 246 (486)
...+.......+........ ..+ ..........+..+++|+|+++|++|.+++++.+..+
T Consensus 155 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~ 228 (270)
T 3llc_A 155 ------EPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKL 228 (270)
T ss_dssp ------GGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred ------hhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHH
Confidence 00000000001100000000 000 0001112345678899999999999999999999999
Q ss_pred HHHcCC-CcEEEEeCC-CCCCC---ChHHHHHHHHHHHHH
Q 011425 247 FNAYAG-DKNIIKFDG-DHNSS---RPQFYYDSVSIFFYN 281 (486)
Q Consensus 247 ~~~l~~-~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~~ 281 (486)
.+.++. ..+++++++ ||+.. .++.+.+.|.+||++
T Consensus 229 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 229 VEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp HHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred HHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 998865 378899986 99755 356777777788764
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=204.77 Aligned_cols=200 Identities=19% Similarity=0.250 Sum_probs=163.1
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC----
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL---- 114 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~---- 114 (486)
++.+.+.+|..+.++++.|. +++.|+||++||++++...|..++..|+++||.|+++|+||+|.+.......
T Consensus 5 ~~~~~~~~g~~l~~~~~~p~----~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 80 (236)
T 1zi8_A 5 GISIQSYDGHTFGALVGSPA----KAPAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (236)
T ss_dssp TCCEECTTSCEECEEEECCS----SCSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHH
T ss_pred eEEEecCCCCeEEEEEECCC----CCCCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhh
Confidence 45677889999999999885 3568999999999999999999999999999999999999999886532211
Q ss_pred -----------Cc-chHHHHHHHHHHHHhcCC-CCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHH
Q 011425 115 -----------GW-HEKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVD 181 (486)
Q Consensus 115 -----------~~-~~~~Dl~~~i~~l~~~~~-~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~ 181 (486)
.. ..++|+.++++++.++.. ..+++|+||||||.+++.+|..+| |+++|+++|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-~~~~v~~~~~~~~--------- 150 (236)
T 1zi8_A 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY-VDRAVGYYGVGLE--------- 150 (236)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC-SSEEEEESCSSGG---------
T ss_pred hhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC-ccEEEEecCcccc---------
Confidence 11 126789999999988755 379999999999999999999999 9999988875321
Q ss_pred HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC--CCcEEEEe
Q 011425 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA--GDKNIIKF 259 (486)
Q Consensus 182 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~--~~~~l~~~ 259 (486)
+....+.++++|+|+++|++|.+++++.+..+++.+. +..+++++
T Consensus 151 ---------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (236)
T 1zi8_A 151 ---------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWY 197 (236)
T ss_dssp ---------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEE
T ss_pred ---------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEE
Confidence 1223455678999999999999999999999999884 37888999
Q ss_pred CC-CCCCCCh----------HHHHHHHHHHHHHhcCC
Q 011425 260 DG-DHNSSRP----------QFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 260 ~g-gH~~~~p----------~~~~~~I~~FL~~~l~~ 285 (486)
++ +|..... +++++.+.+||.+++..
T Consensus 198 ~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 198 EEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp TTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred CCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 86 9976522 46889999999998753
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=203.12 Aligned_cols=224 Identities=15% Similarity=0.100 Sum_probs=153.2
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
.+.+.+|.+|.+..+ ++.|+|||+||++++...|..++..|. .||.|+++|+||||.|+... ... .+
T Consensus 6 ~~~~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~-~~~---~~ 72 (262)
T 3r0v_A 6 TVPSSDGTPIAFERS--------GSGPPVVLVGGALSTRAGGAPLAERLA-PHFTVICYDRRGRGDSGDTP-PYA---VE 72 (262)
T ss_dssp EEECTTSCEEEEEEE--------ECSSEEEEECCTTCCGGGGHHHHHHHT-TTSEEEEECCTTSTTCCCCS-SCC---HH
T ss_pred eEEcCCCcEEEEEEc--------CCCCcEEEECCCCcChHHHHHHHHHHh-cCcEEEEEecCCCcCCCCCC-CCC---HH
Confidence 467789999998776 236789999999999999999999998 79999999999999998664 232 23
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHH--------HHHHHHHHH----------
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLF--------DLMLELVDV---------- 182 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~--------~~~~~~~~~---------- 182 (486)
++.+.+..+.+..+ .+++|+||||||.+++.+|..+|.|+++|+++|..... .....+...
T Consensus 73 ~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (262)
T 3r0v_A 73 REIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAV 151 (262)
T ss_dssp HHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTCCEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCCCcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHH
Confidence 33333333333335 89999999999999999999999999999998865321 111111110
Q ss_pred --HhhhCCchhHHHHHHHHHH-----H--Hhhhhc----ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHH
Q 011425 183 --YKIRLPKFTVKMAVQYMRR-----V--IQKKAK----FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249 (486)
Q Consensus 183 --~~~~~p~~~~~~~~~~~~~-----~--~~~~~~----~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 249 (486)
+..............+... . ...... ...........+.++++|+|+++|++|.++|++.+..+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 231 (262)
T 3r0v_A 152 TYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADT 231 (262)
T ss_dssp HHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHh
Confidence 0000001111110000000 0 000000 00001123456778899999999999999999999999998
Q ss_pred cCCCcEEEEeCC-CCCCCChHHHHHHHHHHHH
Q 011425 250 YAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 250 l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~ 280 (486)
+++ .+++++++ ||+ ..|+++.+.|.+||+
T Consensus 232 ~~~-~~~~~~~~~gH~-~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 232 IPN-ARYVTLENQTHT-VAPDAIAPVLVEFFT 261 (262)
T ss_dssp STT-EEEEECCCSSSS-CCHHHHHHHHHHHHC
T ss_pred CCC-CeEEEecCCCcc-cCHHHHHHHHHHHHh
Confidence 854 57888887 994 589999999999985
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=209.25 Aligned_cols=216 Identities=12% Similarity=0.096 Sum_probs=146.0
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
+..|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+..... . ...+++.+.+..+.+..+.++++|+||
T Consensus 13 ~~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~-~-~~~~~~a~dl~~~l~~l~~~~~~lvGh 89 (268)
T 3v48_A 13 ADAPVVVLISGLGGSGSYWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLAE-D-YSIAQMAAELHQALVAAGIEHYAVVGH 89 (268)
T ss_dssp TTCCEEEEECCTTCCGGGGHHHHHHHHT-TSEEEECCCTTBTTBCCCCCT-T-CCHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCCEEEEeCCCCccHHHHHHHHHHHhh-cCeEEEECCCCCCCCCCCccc-c-CCHHHHHHHHHHHHHHcCCCCeEEEEe
Confidence 4578999999999999999999988876 699999999999999754321 1 123444444444444457789999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH-------HHH-----HHh-----hhCCchhH----HHHHHHHHH
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE-------LVD-----VYK-----IRLPKFTV----KMAVQYMRR 201 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~-------~~~-----~~~-----~~~p~~~~----~~~~~~~~~ 201 (486)
||||.+++.+|..+|+ |+++|++++.......... ... .+. ...+.... .........
T Consensus 90 S~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (268)
T 3v48_A 90 ALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDAL 169 (268)
T ss_dssp THHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccccchhhHHH
Confidence 9999999999999998 9999999876532111100 000 000 00000000 000000000
Q ss_pred HHhhh--------hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHH
Q 011425 202 VIQKK--------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQF 270 (486)
Q Consensus 202 ~~~~~--------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~ 270 (486)
..... ........+....+.++++|+|+|+|++|.++|++.++.+.+.+++ .+++++++ ||+.. .|+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~-~~~~~~~~~GH~~~~e~p~~ 248 (268)
T 3v48_A 170 ALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPD-SQKMVMPYGGHACNVTDPET 248 (268)
T ss_dssp HHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSS-EEEEEESSCCTTHHHHCHHH
T ss_pred HHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCc-CeEEEeCCCCcchhhcCHHH
Confidence 00000 0000011233455678999999999999999999999999999865 56777776 99876 8999
Q ss_pred HHHHHHHHHHHhc
Q 011425 271 YYDSVSIFFYNVL 283 (486)
Q Consensus 271 ~~~~I~~FL~~~l 283 (486)
+.+.|.+||.+.+
T Consensus 249 ~~~~i~~fl~~~~ 261 (268)
T 3v48_A 249 FNALLLNGLASLL 261 (268)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998764
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-24 Score=207.10 Aligned_cols=227 Identities=17% Similarity=0.188 Sum_probs=147.3
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-CCCcch-HHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHE-KDDL 122 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-~~~~~~-~~Dl 122 (486)
.+|.++.+..+-+ +...++|||+||++++...|......+++.||.|+++|+||||.|+.... ...... ++|+
T Consensus 12 ~~g~~l~~~~~g~-----~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl 86 (293)
T 1mtz_A 12 VNGIYIYYKLCKA-----PEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEA 86 (293)
T ss_dssp ETTEEEEEEEECC-----SSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHH
T ss_pred ECCEEEEEEEECC-----CCCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHH
Confidence 4788888877622 11237899999987665555554556677799999999999999986541 122211 4555
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCch-----------
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKF----------- 190 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~----------- 190 (486)
.++++.+. +.++++|+||||||.+++.+|.++|+ |+++|++++............. .....+..
T Consensus 87 ~~~~~~l~---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (293)
T 1mtz_A 87 EALRSKLF---GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNR-LIDELPAKYRDAIKKYGSS 162 (293)
T ss_dssp HHHHHHHH---TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHH-HHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhc---CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHH-HHHhcCHHHHHHHHHhhcc
Confidence 55555542 45789999999999999999999997 9999999988764321111000 00000000
Q ss_pred ------hH-------------------HHHHHHHHHH-----Hhhh---hcc----cccccchhhhCCCCCCCEEEEEeC
Q 011425 191 ------TV-------------------KMAVQYMRRV-----IQKK---AKF----DIMDLNCLKLAPKTFIPALFGHAS 233 (486)
Q Consensus 191 ------~~-------------------~~~~~~~~~~-----~~~~---~~~----~~~~~~~~~~l~~i~~PvLii~G~ 233 (486)
.. .......... +... ..+ .....+....+.++++|+|+|+|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 242 (293)
T 1mtz_A 163 GSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGE 242 (293)
T ss_dssp TCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEET
T ss_pred CCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCEEEEeeC
Confidence 00 0000000000 0000 000 011123344566789999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 234 EDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 234 ~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
+| .+++..+..+.+.+++ .+++++++ ||+.. .|+++.+.|.+||.++
T Consensus 243 ~D-~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 243 YD-EVTPNVARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp TC-SSCHHHHHHHHHHSTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CC-CCCHHHHHHHHHhCCC-ceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 99 7788888899888864 67888887 99866 7999999999999865
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-24 Score=206.11 Aligned_cols=230 Identities=16% Similarity=0.208 Sum_probs=150.9
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC--CCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV--SLG 115 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~--~~~ 115 (486)
++..+.+.+|.+|.+..+-+. .+.|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.... ...
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~-----~~~~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~ 79 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGD-----ISRPPVLCLPGLTRNARDFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDPMTYQ 79 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBC-----TTSCCEEEECCTTCCGGGGHHHHHHHBB-TBCEEEECCTTBTTSCCCSSGGGCS
T ss_pred ccCeeecCCCceEEEEEcCCC-----CCCCcEEEECCCCcchhhHHHHHHHhhc-CCEEEeecCCCCCCCCCCCCccccC
Confidence 455677889999999887432 1268899999999999999999999987 89999999999999986431 222
Q ss_pred cc-hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCc--cCHHHHHHHHHH----------
Q 011425 116 WH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF--SDLFDLMLELVD---------- 181 (486)
Q Consensus 116 ~~-~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~--~~~~~~~~~~~~---------- 181 (486)
.. .++|+.++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++. ..... ......
T Consensus 80 ~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 154 (285)
T 3bwx_A 80 PMQYLQDLEALLAQE----GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEG-LERIRGYVGQGRNFET 154 (285)
T ss_dssp HHHHHHHHHHHHHHH----TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHH-HHHHHHHTTCCCEESS
T ss_pred HHHHHHHHHHHHHhc----CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcch-hHHHHHHhcCCccccc
Confidence 21 155666666655 56899999999999999999999998 9999997532 22111 110000
Q ss_pred ----------HHhhhCCchhHHHHHHHHHHHHhhh-hc-----cc------cc-------ccchhhhCCCC-CCCEEEEE
Q 011425 182 ----------VYKIRLPKFTVKMAVQYMRRVIQKK-AK-----FD------IM-------DLNCLKLAPKT-FIPALFGH 231 (486)
Q Consensus 182 ----------~~~~~~p~~~~~~~~~~~~~~~~~~-~~-----~~------~~-------~~~~~~~l~~i-~~PvLii~ 231 (486)
......+.........+....+... .. ++ .. ..+....+..+ ++|+|+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~ 234 (285)
T 3bwx_A 155 WMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLR 234 (285)
T ss_dssp HHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEE
T ss_pred HHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEE
Confidence 0000111111111111111111100 00 00 00 00001111223 79999999
Q ss_pred eCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 232 ASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 232 G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
|++|.+++++.+..+.+. .+.+++++++ ||+.. .|+.+ ..|.+||.+
T Consensus 235 G~~D~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 235 GETSDILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp ETTCSSSCHHHHHHHHTS--TTEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred eCCCCccCHHHHHHHHhC--CCcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 999999999988888776 5678889987 99866 56655 689999864
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-24 Score=201.21 Aligned_cols=210 Identities=16% Similarity=0.137 Sum_probs=164.4
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
+..+.+.+.. +|..+.++++.|.. ..++.|+||++||+++....+..++..|+++||.|+++|++|+|.+.......
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~p~~--~~~~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~ 80 (241)
T 3f67_A 4 IIAGETSIPS-QGENMPAYHARPKN--ADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDI 80 (241)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEETT--CCSCEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSH
T ss_pred ceeeeEEEec-CCcceEEEEecCCC--CCCCCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhH
Confidence 4557788887 89999999999974 23568999999999999988999999999999999999999998776543321
Q ss_pred C-----------c-chHHHHHHHHHHHHhcCC-CCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHH
Q 011425 115 G-----------W-HEKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVD 181 (486)
Q Consensus 115 ~-----------~-~~~~Dl~~~i~~l~~~~~-~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~ 181 (486)
. . ..++|+.++++++.+... ..+++|+||||||.+++.++..+|++.++|++.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~v~~~~~~~~~-------- 152 (241)
T 3f67_A 81 PTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGE-------- 152 (241)
T ss_dssp HHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTTCCEEEEESCCCSCC--------
T ss_pred HHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcCcceEEEEeccccCC--------
Confidence 1 0 127899999999988742 368999999999999999999999988888766553200
Q ss_pred HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEE
Q 011425 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIK 258 (486)
Q Consensus 182 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~ 258 (486)
+ ......++...+.++++|+|+++|++|.++|++.+..+++.+. ...++++
T Consensus 153 ------~--------------------~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 206 (241)
T 3f67_A 153 ------K--------------------SLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVV 206 (241)
T ss_dssp ------C--------------------CSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ------C--------------------ccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 0 0011123445566778999999999999999999999988874 5788999
Q ss_pred eCC-CCCCCC----------hHHHHHHHHHHHHH
Q 011425 259 FDG-DHNSSR----------PQFYYDSVSIFFYN 281 (486)
Q Consensus 259 ~~g-gH~~~~----------p~~~~~~I~~FL~~ 281 (486)
+++ +|.... .+++++.+.+||++
T Consensus 207 ~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 207 YPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp ETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 997 997641 25678888899875
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-24 Score=207.41 Aligned_cols=225 Identities=16% Similarity=0.113 Sum_probs=146.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh---hHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-CCCcchHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHEKD 120 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~---~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-~~~~~~~~ 120 (486)
.+|.++.+..+ +..|+|||+||++.+.. .|..++..| ..+|+|+++|+||||.|+.... ... .+
T Consensus 12 ~~g~~l~y~~~--------G~g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~~~~~---~~ 79 (282)
T 1iup_A 12 AAGVLTNYHDV--------GEGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGFGFTDRPENYNYS---KD 79 (282)
T ss_dssp ETTEEEEEEEE--------CCSSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCCTTCCCC---HH
T ss_pred ECCEEEEEEec--------CCCCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCCCCCCCCCCCCCC---HH
Confidence 47888887665 23578999999976544 566667777 4589999999999999986432 222 33
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH---HHH-------------HHHHHHHH
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---FDL-------------MLELVDVY 183 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~---~~~-------------~~~~~~~~ 183 (486)
++.+.+..+.+..+.++++|+||||||.+++.+|.++|+ |+++|++++.... ... +......+
T Consensus 80 ~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
T 1iup_A 80 SWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIF 159 (282)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHHHHHHHHHh
Confidence 333333333334467899999999999999999999998 9999999875421 000 11111110
Q ss_pred hhhCCchhHHHHHHHHHHH--------Hhhhhcc---cccc-c-chhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 184 KIRLPKFTVKMAVQYMRRV--------IQKKAKF---DIMD-L-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 184 ~~~~p~~~~~~~~~~~~~~--------~~~~~~~---~~~~-~-~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
................... +...... ...+ . .....+.++++|+|+|+|++|.++|++.+..+.+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~ 239 (282)
T 1iup_A 160 AYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI 239 (282)
T ss_dssp CSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred hcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhC
Confidence 0000000001100000000 0000000 0000 0 011467789999999999999999999999999888
Q ss_pred CCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 251 AGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 251 ~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
++ .+++++++ ||+.. .|+++.+.|.+||.+.
T Consensus 240 ~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 240 DR-AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273 (282)
T ss_dssp TT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CC-CeEEEECCCCCCccccCHHHHHHHHHHHHhcC
Confidence 64 67888887 99866 7999999999999864
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=204.69 Aligned_cols=225 Identities=14% Similarity=0.142 Sum_probs=153.9
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~ 123 (486)
..+|.+|.+..+.+ +..|+||++||++++...|..++..|.++||.|+++|+||+|.|........ ...+++.
T Consensus 10 ~~~g~~l~~~~~g~------~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~-~~~~~~~ 82 (286)
T 3qit_A 10 EFGGNQICLCSWGS------PEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTS-YSSLTFL 82 (286)
T ss_dssp EETTEEEEEEEESC------TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGG-CSHHHHH
T ss_pred ecCCceEEEeecCC------CCCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCC-cCHHHHH
Confidence 35899999988833 4578999999999999999999999999999999999999999987652222 1234555
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH--------HHHHHHHHHHHhhh--------
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL--------FDLMLELVDVYKIR-------- 186 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~--------~~~~~~~~~~~~~~-------- 186 (486)
+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++.... ...+..........
T Consensus 83 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
T 3qit_A 83 AQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPD 162 (286)
T ss_dssp HHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCCCCCCBSS
T ss_pred HHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhcccccccccc
Confidence 555555555567899999999999999999999997 9999999986532 11111111111111
Q ss_pred -----------CCchhHHHHHHHHHHHHhhhhc-----c----------cc-----cccchhhhCCCCCCCEEEEEeCCC
Q 011425 187 -----------LPKFTVKMAVQYMRRVIQKKAK-----F----------DI-----MDLNCLKLAPKTFIPALFGHASED 235 (486)
Q Consensus 187 -----------~p~~~~~~~~~~~~~~~~~~~~-----~----------~~-----~~~~~~~~l~~i~~PvLii~G~~D 235 (486)
.+.........+.......... + .. ...+....+.++++|+|+|+|++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 242 (286)
T 3qit_A 163 VATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSS 242 (286)
T ss_dssp HHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEEETTC
T ss_pred HHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccCCCeEEEEeCCC
Confidence 1111111111111111000000 0 00 111223345678999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHH
Q 011425 236 KFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVS 276 (486)
Q Consensus 236 ~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~ 276 (486)
.++|++.+..+.+.+++ .+++++++||+.. .|+++.+.|.
T Consensus 243 ~~~~~~~~~~~~~~~~~-~~~~~~~ggH~~~~e~p~~~~~~i~ 284 (286)
T 3qit_A 243 KLNRPEDLQQQKMTMTQ-AKRVFLSGGHNLHIDAAAALASLIL 284 (286)
T ss_dssp CSSCHHHHHHHHHHSTT-SEEEEESSSSCHHHHTHHHHHHHHH
T ss_pred cccCHHHHHHHHHHCCC-CeEEEeeCCchHhhhChHHHHHHhh
Confidence 99999999999998865 5788888899876 7777777664
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-23 Score=209.90 Aligned_cols=245 Identities=18% Similarity=0.223 Sum_probs=173.6
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH-HHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-AAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~-~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
.+..+.+.+.+.||..+.+++|.|.+ ...++.|+||++||++++...|.. ++..|+++||.|+++|+||+|.|.+.+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~ 143 (367)
T 2hdw_A 65 KVEHRKVTFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPR 143 (367)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSS
T ss_pred CceeEEEEEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCc
Confidence 35668899999999999999999975 224678999999999999888875 7889999999999999999999987665
Q ss_pred CCCc--chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHH----------
Q 011425 113 SLGW--HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLE---------- 178 (486)
Q Consensus 113 ~~~~--~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~---------- 178 (486)
.... ..++|+.++++++.++... ++++|+|||+||.+++.+|..+|+|+++|+++|+. .......
T Consensus 144 ~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~v~~~p~~-~~~~~~~~~~~~~~~~~ 222 (367)
T 2hdw_A 144 NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTSTMYD-MTRVMSKGYNDSVTLEQ 222 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCC-HHHHHHHTTTTCCCHHH
T ss_pred cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCCCccEEEEecccc-ccHHHhhhhccccchHH
Confidence 4432 3478999999999887543 68999999999999999999999999999999763 2211110
Q ss_pred ---HHHH--------Hh-hh------CC---chhHHHHHHHHHHHHhhhhc-----------------ccccccchhhhC
Q 011425 179 ---LVDV--------YK-IR------LP---KFTVKMAVQYMRRVIQKKAK-----------------FDIMDLNCLKLA 220 (486)
Q Consensus 179 ---~~~~--------~~-~~------~p---~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l 220 (486)
.... +. .. .| ............. +..... ......+....+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (367)
T 2hdw_A 223 RTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDY-YMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYI 301 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHH-HTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTG
T ss_pred HHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccce-eecccccCcccccccchhhhhhHHHhcCCChhHhH
Confidence 0000 00 00 00 0000000011110 000000 000112334556
Q ss_pred CCCC-CCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHH-HHHHHHHHHHHhc
Q 011425 221 PKTF-IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQF-YYDSVSIFFYNVL 283 (486)
Q Consensus 221 ~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~-~~~~I~~FL~~~l 283 (486)
.+++ +|+|+++|++|. ++..+..+++....+.+++++++ ||... .++. +.+.+.+||.+++
T Consensus 302 ~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 302 KEISPRPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp GGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred HhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 6788 999999999999 88889999888667789999998 99843 3433 6899999998764
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=208.45 Aligned_cols=228 Identities=12% Similarity=0.084 Sum_probs=153.7
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHH
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKV 124 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~ 124 (486)
+|..|.+..+ ++.|+|||+||++++...|..++..|+..||.|+++|+||||.|........... ++|+.+
T Consensus 17 ~g~~l~~~~~--------g~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~~~ 88 (309)
T 3u1t_A 17 EGATIAYVDE--------GSGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYMDG 88 (309)
T ss_dssp TTEEEEEEEE--------ECSSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHHHHHHHH
T ss_pred CCeEEEEEEc--------CCCCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHHHHHHHH
Confidence 8888888766 2368999999999999999999998778899999999999999987554333221 444444
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH----------HHHHHHHHHHhhh-------
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF----------DLMLELVDVYKIR------- 186 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~----------~~~~~~~~~~~~~------- 186 (486)
+++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++..... .............
T Consensus 89 ~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (309)
T 3u1t_A 89 FIDAL----GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMV 164 (309)
T ss_dssp HHHHH----TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTTHHHHHH
T ss_pred HHHHc----CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccchhhhhc
Confidence 44444 66899999999999999999999998 99999988654311 1111111111000
Q ss_pred ----------------CCchhHHHHHHHHHHH---------Hhhhhccc---------ccccchhhhCCCCCCCEEEEEe
Q 011425 187 ----------------LPKFTVKMAVQYMRRV---------IQKKAKFD---------IMDLNCLKLAPKTFIPALFGHA 232 (486)
Q Consensus 187 ----------------~p~~~~~~~~~~~~~~---------~~~~~~~~---------~~~~~~~~~l~~i~~PvLii~G 232 (486)
...+.......+.... ........ ....+....+.++++|+|+|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G 244 (309)
T 3u1t_A 165 LDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHA 244 (309)
T ss_dssp TTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred cccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCCEEEEec
Confidence 0000000000000000 00000000 0000222345668899999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhcCCC
Q 011425 233 SEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 233 ~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l~~~ 286 (486)
++|.++|++.+..+.+.+++. .++.+++ ||+.. .|+++.+.|.+||++.....
T Consensus 245 ~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~ 300 (309)
T 3u1t_A 245 EPGALAPKPVVDYLSENVPNL-EVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPHA 300 (309)
T ss_dssp EECSSSCHHHHHHHHHHSTTE-EEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCCCCHHHHHHHHhhCCCC-EEEEecCCcccchhhCHHHHHHHHHHHHHhcchhh
Confidence 999999999999999998664 4555555 99866 89999999999999987654
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-24 Score=204.54 Aligned_cols=224 Identities=16% Similarity=0.112 Sum_probs=149.8
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl 122 (486)
+.+|..|.+..+ + ..++|||+||++++...|..++..|+++||+|+++|+||||.|+.......+.. ++|+
T Consensus 9 ~~~g~~l~y~~~------g--~~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 80 (279)
T 1hkh_A 9 NSTPIELYYEDQ------G--SGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADL 80 (279)
T ss_dssp TTEEEEEEEEEE------S--SSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred CCCCeEEEEEec------C--CCCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 567778877665 1 345699999999999999999999999999999999999999986543333322 5666
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC--ccEEEEcCCccCH------------HHHHHHHHHHHh----
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDL------------FDLMLELVDVYK---- 184 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~--v~~lVl~sp~~~~------------~~~~~~~~~~~~---- 184 (486)
.++++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++.... ......+.....
T Consensus 81 ~~~l~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (279)
T 1hkh_A 81 HTVLETL----DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRF 156 (279)
T ss_dssp HHHHHHH----TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHhc----CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhh
Confidence 6666665 56899999999999999999999885 9999999874320 011111100000
Q ss_pred -----------hh----CCchhHHHHHHHHHHHHhhhh-----cccccccchhhhCCCC---CCCEEEEEeCCCCCCCHH
Q 011425 185 -----------IR----LPKFTVKMAVQYMRRVIQKKA-----KFDIMDLNCLKLAPKT---FIPALFGHASEDKFIRAR 241 (486)
Q Consensus 185 -----------~~----~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~i---~~PvLii~G~~D~~vp~~ 241 (486)
.. ...........+......... .+.....+....+.++ ++|+|+|+|++|.++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~ 236 (279)
T 1hkh_A 157 AWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPID 236 (279)
T ss_dssp HHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTT
T ss_pred hhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChH
Confidence 00 000000001111111000000 0000011222344566 899999999999999998
Q ss_pred HH-HHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 242 HS-DLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 242 ~~-~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
.+ ..+.+.++ +.+++++++ ||+.. .|+++.+.|.+||.
T Consensus 237 ~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 237 ATARRFHQAVP-EADYVEVEGAPHGLLWTHADEVNAALKTFLA 278 (279)
T ss_dssp TTHHHHHHHCT-TSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-CeeEEEeCCCCccchhcCHHHHHHHHHHHhh
Confidence 77 78888775 467888887 99866 78999999999986
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=205.01 Aligned_cols=222 Identities=14% Similarity=0.129 Sum_probs=147.5
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHH-HHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH
Q 011425 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAA-VILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~-~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~ 123 (486)
.++.|..+ +..|+|||+||++ ++...|..++ ..|.+. |+|+++|+||||.|+..... . +..+++.
T Consensus 23 ~~l~y~~~--------G~g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~-~-~~~~~~a 91 (286)
T 2puj_A 23 FNIHYNEA--------GNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPGFNKSDAVVMD-E-QRGLVNA 91 (286)
T ss_dssp EEEEEEEE--------CCSSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCS-S-CHHHHHH
T ss_pred EEEEEEec--------CCCCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCCCCCCCCCCCc-C-cCHHHHH
Confidence 88887765 2357999999998 7777788888 888775 99999999999999865321 1 2234444
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH--------HHHHHHHHHHH-----------
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL--------FDLMLELVDVY----------- 183 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~--------~~~~~~~~~~~----------- 183 (486)
+.+..+.+..+.++++|+||||||.+|+.+|.++|+ |+++|++++.... ..........+
T Consensus 92 ~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (286)
T 2puj_A 92 RAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQM 171 (286)
T ss_dssp HHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHH
Confidence 444444444477899999999999999999999998 9999999875420 01111111100
Q ss_pred -hhhC--Cc-hhHHHHHHHHH----------HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHH
Q 011425 184 -KIRL--PK-FTVKMAVQYMR----------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249 (486)
Q Consensus 184 -~~~~--p~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 249 (486)
.... +. .........+. ..............+....+.++++|+|+|+|++|.++|++.++.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~ 251 (286)
T 2puj_A 172 LQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWN 251 (286)
T ss_dssp HHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred HHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHH
Confidence 0000 00 00000000010 0000000000011223456678899999999999999999999999998
Q ss_pred cCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 250 YAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 250 l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+++ .+++++++ ||+.. .|+++.+.|.+||.+
T Consensus 252 ~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 252 IDD-ARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp SSS-EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred CCC-CeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 864 57888887 99866 789999999999974
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-24 Score=202.70 Aligned_cols=224 Identities=14% Similarity=0.145 Sum_probs=153.6
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+|.++.+..+ +..|+|||+||++++...|..++..|.+ ||.|+++|+||||.|........ ...+++.+
T Consensus 10 ~~~~~~~y~~~--------g~~~~vv~~HG~~~~~~~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~~~~-~~~~~~~~ 79 (278)
T 3oos_A 10 TPRGKFEYFLK--------GEGPPLCVTHLYSEYNDNGNTFANPFTD-HYSVYLVNLKGCGNSDSAKNDSE-YSMTETIK 79 (278)
T ss_dssp ETTEEEEEEEE--------CSSSEEEECCSSEECCTTCCTTTGGGGG-TSEEEEECCTTSTTSCCCSSGGG-GSHHHHHH
T ss_pred cCCceEEEEec--------CCCCeEEEEcCCCcchHHHHHHHHHhhc-CceEEEEcCCCCCCCCCCCCccc-CcHHHHHH
Confidence 46778887654 3568999999999999989888888887 99999999999999986543222 12445454
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC----------------HHHHHHHHHHHHhhhC
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD----------------LFDLMLELVDVYKIRL 187 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~----------------~~~~~~~~~~~~~~~~ 187 (486)
.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++... ....+...........
T Consensus 80 ~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (278)
T 3oos_A 80 DLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDS 159 (278)
T ss_dssp HHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccc
Confidence 55444455577899999999999999999999997 999999998766 1111122211111100
Q ss_pred -CchhHHHHHHHH-----------HHHHhhh-------------hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH
Q 011425 188 -PKFTVKMAVQYM-----------RRVIQKK-------------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (486)
Q Consensus 188 -p~~~~~~~~~~~-----------~~~~~~~-------------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (486)
............ ...+... ........+....+.++++|+|+++|++|.++|++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 239 (278)
T 3oos_A 160 TVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIF 239 (278)
T ss_dssp SCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHH
T ss_pred cCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHH
Confidence 000000000000 0000000 000111234455677899999999999999999999
Q ss_pred HHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHH
Q 011425 243 SDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFF 279 (486)
Q Consensus 243 ~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL 279 (486)
+..+.+.++ +.+++++++ ||+.. .|+++.+.|.+||
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 240 SCEIANLIP-NATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp HHHHHHHST-TEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred HHHHHhhCC-CcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 999999885 468888997 99976 7889999988875
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-23 Score=191.49 Aligned_cols=188 Identities=14% Similarity=0.123 Sum_probs=154.8
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH--HHHHhccCCeEEEEEcCCCCCCC---CCCCCCCCcch
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE--AAVILLPSNITLFTLDFSGSGLS---DGDYVSLGWHE 118 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~--~~~~L~~~Gy~Vv~~D~rG~G~S---~~~~~~~~~~~ 118 (486)
..+|.+|.+++|.|. ++.|+||++||++++...|.. ++..|+++||.|+++|+||+|.+ ....... ..
T Consensus 10 ~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~--~~ 82 (207)
T 3bdi_A 10 DVNGTRVFQRKMVTD-----SNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDR--GD 82 (207)
T ss_dssp EETTEEEEEEEECCT-----TCCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCTT--CC
T ss_pred eeCCcEEEEEEEecc-----CCCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCCc--ch
Confidence 358999999999875 367899999999999999999 99999999999999999999999 5443322 13
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHH
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQ 197 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 197 (486)
.+++.+.+..+.+..+.++++++|||+||.+++.++..+|+ ++++|+++|..... +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----------------~------- 139 (207)
T 3bdi_A 83 LKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES----------------L------- 139 (207)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG----------------G-------
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc----------------h-------
Confidence 56666666666666667899999999999999999999997 99999999874311 0
Q ss_pred HHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHH
Q 011425 198 YMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDS 274 (486)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~ 274 (486)
...+.++++|+++++|++|.+++++.+..+.+.++ +.+++++++ +|... .++++.+.
T Consensus 140 -------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~ 199 (207)
T 3bdi_A 140 -------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIIS-GSRLEIVEGSGHPVYIEKPEEFVRI 199 (207)
T ss_dssp -------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHST-TCEEEEETTCCSCHHHHSHHHHHHH
T ss_pred -------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcC-CceEEEeCCCCCCccccCHHHHHHH
Confidence 12334677999999999999999999999999884 567888887 99865 67889999
Q ss_pred HHHHHHH
Q 011425 275 VSIFFYN 281 (486)
Q Consensus 275 I~~FL~~ 281 (486)
|.+||++
T Consensus 200 i~~fl~~ 206 (207)
T 3bdi_A 200 TVDFLRN 206 (207)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9999975
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=205.09 Aligned_cols=225 Identities=12% Similarity=0.043 Sum_probs=153.9
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCCcch-HHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl 122 (486)
.+|..+.+..+ +..|+|||+||++++...|..++..|.. .||.|+++|+||||.|..... ..... ++|+
T Consensus 8 ~~g~~l~y~~~--------g~~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~ 78 (272)
T 3fsg_A 8 LTRSNISYFSI--------GSGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-STSDNVLETL 78 (272)
T ss_dssp ECTTCCEEEEE--------CCSSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS-CSHHHHHHHH
T ss_pred ecCCeEEEEEc--------CCCCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC-CCHHHHHHHH
Confidence 37777887654 3568999999999999999999988887 799999999999999987665 33221 4455
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH-----------------------HHHH
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-----------------------LMLE 178 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~-----------------------~~~~ 178 (486)
.++++.+ .+.++++|+||||||.+++.+|..+|+ |+++|+++|...... ....
T Consensus 79 ~~~l~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
T 3fsg_A 79 IEAIEEI---IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFAD 155 (272)
T ss_dssp HHHHHHH---HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHH
T ss_pred HHHHHHH---hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHH
Confidence 5555442 356899999999999999999999997 999999988742110 0000
Q ss_pred HHHHHhhhCCchhHHHHHHHHHH--------HHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 179 LVDVYKIRLPKFTVKMAVQYMRR--------VIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 179 ~~~~~~~~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
+..... ................ .............+....+..+++|+|+|+|++|.++|++.+..+.+.+
T Consensus 156 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 234 (272)
T 3fsg_A 156 FLSMNV-IINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHN 234 (272)
T ss_dssp HHHHCS-EESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTC
T ss_pred HHHHhc-cCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhc
Confidence 100000 0000000000000000 0000000111122223356789999999999999999999999998887
Q ss_pred CCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 251 AGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 251 ~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
+ ..+++++++ ||+.. .++++.+.|.+||.+..
T Consensus 235 ~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 235 E-NGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELN 269 (272)
T ss_dssp T-TEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHHH
T ss_pred C-CCeEEEecCCCCCchhcCHHHHHHHHHHHHHHhh
Confidence 5 467888887 99976 78999999999998764
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-24 Score=217.94 Aligned_cols=234 Identities=18% Similarity=0.164 Sum_probs=169.0
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
+..+.+.+.. ||.+|.+++|.|.+ .++.|+||++||++++...+...+..|+++||.|+++|+||+|.+..... .
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~---~~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~-~ 199 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEG---PGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKR-I 199 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSS---SCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCC-S
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCC---CCCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCC-C
Confidence 4456777776 89999999999874 35789999999999988877777888899999999999999999832211 1
Q ss_pred CcchHHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHH---HHH-HHHhhhCC
Q 011425 115 GWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLML---ELV-DVYKIRLP 188 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~---~~~-~~~~~~~p 188 (486)
.....+++.++++++.++.. .++++|+|||+||++++.++...+.|+++|++ |+.++..... ... ........
T Consensus 200 ~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~a~v~~-~~~~~~~~~~~~~~~~~~~~~~~~g 278 (386)
T 2jbw_A 200 AGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISW-GGFSDLDYWDLETPLTKESWKYVSK 278 (386)
T ss_dssp CSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEE-SCCSCSTTGGGSCHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcCCcceeEEEEe-ccCChHHHHHhccHHHHHHHHHHhC
Confidence 12224678899999988633 37999999999999999999994459999999 8766422111 000 00000000
Q ss_pred chhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc-CCCcEEEEeCC-CCCCC
Q 011425 189 KFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY-AGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l-~~~~~l~~~~g-gH~~~ 266 (486)
..... .+.... ....++...+.++++|+|+++|++|. +++..+..+++.+ +...+++++++ ||...
T Consensus 279 ~~~~~---~~~~~~--------~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~~ 346 (386)
T 2jbw_A 279 VDTLE---EARLHV--------HAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCCH 346 (386)
T ss_dssp CSSHH---HHHHHH--------HHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGGG
T ss_pred CCCHH---HHHHHH--------HHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCCc
Confidence 00000 000000 01123334566788999999999999 9999999999999 65788999998 89755
Q ss_pred -ChHHHHHHHHHHHHHhcCCC
Q 011425 267 -RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 267 -~p~~~~~~I~~FL~~~l~~~ 286 (486)
.++.+.+.|.+||.+++...
T Consensus 347 ~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 347 NLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp GGTTHHHHHHHHHHHHHHTSS
T ss_pred cchHHHHHHHHHHHHHhcCCc
Confidence 67899999999999998754
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-25 Score=210.57 Aligned_cols=238 Identities=11% Similarity=0.072 Sum_probs=154.1
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~ 117 (486)
+...+...+| .+.+..+ ++..|+|||+||++++...|..++..|...||.|+++|+||||.|..........
T Consensus 4 ~~~~~~~~~~-~~~~~~~-------~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 75 (279)
T 4g9e_A 4 NYHELETSHG-RIAVRES-------EGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSY 75 (279)
T ss_dssp EEEEEEETTE-EEEEEEC-------CCCEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHS
T ss_pred EEEEEEcCCc-eEEEEec-------CCCCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCC
Confidence 3445555665 5665543 2457899999999999999999999877779999999999999998653221111
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHH---------------------
Q 011425 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLM--------------------- 176 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~--------------------- 176 (486)
..+++.+.+..+.+..+..+++|+||||||.+++.+|..+|++.++|+++++.......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (279)
T 4g9e_A 76 SMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSER 155 (279)
T ss_dssp SHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhccchhhhhcCcccccHH
Confidence 23333333333333336679999999999999999999999988888887654322111
Q ss_pred --HHHHHHHhh-hCCchhHHHHHH----HHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHH-H
Q 011425 177 --LELVDVYKI-RLPKFTVKMAVQ----YMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIF-N 248 (486)
Q Consensus 177 --~~~~~~~~~-~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~-~ 248 (486)
......... ............ ......... ......+....+..+++|+|+|+|++|.++|++.+..+. +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 233 (279)
T 4g9e_A 156 DVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKF--GSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFG 233 (279)
T ss_dssp HHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHH--HHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCS
T ss_pred HHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHh--hccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhc
Confidence 111110000 000000000000 000000000 001122334456678899999999999999999888877 4
Q ss_pred HcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhcCCC
Q 011425 249 AYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 249 ~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l~~~ 286 (486)
.+ .+.+++++++ ||+.. .|+++.+.|.+||.+.....
T Consensus 234 ~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~ 273 (279)
T 4g9e_A 234 NL-WEGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQLE 273 (279)
T ss_dssp SB-GGGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHSSC
T ss_pred cC-CCCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhhhh
Confidence 44 3467888887 99966 89999999999999876543
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=203.41 Aligned_cols=232 Identities=15% Similarity=0.085 Sum_probs=146.1
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC--cchH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG--WHEK 119 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~--~~~~ 119 (486)
+...+|.+|.+..+ +..|+|||+||++++...|..++..|.+ ||.|+++|+||||.|+....... ....
T Consensus 17 ~~~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 87 (306)
T 3r40_A 17 WINTSSGRIFARVG--------GDGPPLLLLHGFPQTHVMWHRVAPKLAE-RFKVIVADLPGYGWSDMPESDEQHTPYTK 87 (306)
T ss_dssp EECCTTCCEEEEEE--------ECSSEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCCTTCGGGSH
T ss_pred EEEeCCEEEEEEEc--------CCCCeEEEECCCCCCHHHHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCCcccCCCCH
Confidence 44568889988775 2568999999999999999999999988 99999999999999986654211 1123
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHH---------------------
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML--------------------- 177 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~--------------------- 177 (486)
+++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++.........
T Consensus 88 ~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (306)
T 3r40_A 88 RAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPAPL 167 (306)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCTTH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhcccch
Confidence 4444444444444467899999999999999999999997 999999997543211000
Q ss_pred --------------HHHHHHhhh--CCchhHHHHHHHHHHHHh------------hhhccccc-ccchhhhCCCCCCCEE
Q 011425 178 --------------ELVDVYKIR--LPKFTVKMAVQYMRRVIQ------------KKAKFDIM-DLNCLKLAPKTFIPAL 228 (486)
Q Consensus 178 --------------~~~~~~~~~--~p~~~~~~~~~~~~~~~~------------~~~~~~~~-~~~~~~~l~~i~~PvL 228 (486)
.....+... ...........+...... ........ .......+..+++|+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 247 (306)
T 3r40_A 168 PENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPML 247 (306)
T ss_dssp HHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEE
T ss_pred HHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCCCcceE
Confidence 000000000 011111111111110000 00000000 0001124688999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHHHh
Q 011425 229 FGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 229 ii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~~~ 282 (486)
+|+|++|.+++.......++.+..+.+++++++||+.. .|+++.+.|.+||.+.
T Consensus 248 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 248 ALWGASGIAQSAATPLDVWRKWASDVQGAPIESGHFLPEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp EEEETTCC------CHHHHHHHBSSEEEEEESSCSCHHHHSHHHHHHHHHHHHHC-
T ss_pred EEEecCCcccCchhHHHHHHhhcCCCeEEEecCCcCchhhChHHHHHHHHHHHHhc
Confidence 99999999999554444445544566777777799866 7899999999999864
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.2e-24 Score=207.91 Aligned_cols=227 Identities=15% Similarity=0.117 Sum_probs=148.7
Q ss_pred EcCCC-cEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-CCCcc
Q 011425 43 RNARG-HVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWH 117 (486)
Q Consensus 43 ~~~dG-~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-~~~~~ 117 (486)
...+| ..+.+..+ +.++.|+|||+||++ ++...|..++..|.+. |+|+++|+||||.|+.... .....
T Consensus 18 ~~~~g~~~l~y~~~------G~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~ 90 (291)
T 2wue_A 18 VDVDGPLKLHYHEA------GVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNR 90 (291)
T ss_dssp EESSSEEEEEEEEE------CTTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTTSTTSCCCSCCSSHHH
T ss_pred EEeCCcEEEEEEec------CCCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCCCCCCCCCCCCCcCHH
Confidence 34588 88888765 223446999999998 6777788888888775 9999999999999986543 22111
Q ss_pred h-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH--------HHHHHHHHHH-----
Q 011425 118 E-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL--------FDLMLELVDV----- 182 (486)
Q Consensus 118 ~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~--------~~~~~~~~~~----- 182 (486)
. ++|+.++++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++.... ..........
T Consensus 91 ~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
T 2wue_A 91 YAAMALKGLFDQL----GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPT 166 (291)
T ss_dssp HHHHHHHHHHHHH----TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHh----CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCC
Confidence 1 34444444443 67899999999999999999999998 9999999875420 0111111110
Q ss_pred -------HhhhC--Cc-hhHHHHHHHHH---------HHHhhhhcc-c--ccccchhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 183 -------YKIRL--PK-FTVKMAVQYMR---------RVIQKKAKF-D--IMDLNCLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 183 -------~~~~~--p~-~~~~~~~~~~~---------~~~~~~~~~-~--~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
..... +. ........... ..+.....+ . .........+.++++|+|+|+|++|.++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 246 (291)
T 2wue_A 167 RENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPL 246 (291)
T ss_dssp HHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCG
T ss_pred HHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCH
Confidence 00000 00 00011111110 011000000 0 000111245678899999999999999999
Q ss_pred HHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 241 RHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 241 ~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+.+..+++.+++ .+++++++ ||+.. .|+++.+.|.+||.+
T Consensus 247 ~~~~~~~~~~p~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 247 DGALVALKTIPR-AQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp GGGHHHHHHSTT-EEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC-CeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 989999888864 67888887 99866 789999999999853
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=217.15 Aligned_cols=248 Identities=14% Similarity=0.180 Sum_probs=165.6
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCC--CCCCCcEEEEeCCCCCChhhHHHH------HHHhccCCeEEEEEcCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFP--EDTPLPCVVYCHGNSGCRADANEA------AVILLPSNITLFTLDFSGSG 105 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~--~~~~~p~VV~lHG~gg~~~~~~~~------~~~L~~~Gy~Vv~~D~rG~G 105 (486)
.|+.+.+.+.+.||..|.+..+.|.... ..+.+|+|||+||++++...|..+ +..|+++||.|+++|+||||
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G 103 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNT 103 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCC
Confidence 3455778889999999999888654210 013689999999999998877554 34888889999999999999
Q ss_pred CCCCC----CC-----CCCcch-HH-HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC----CccEEEEcCCcc
Q 011425 106 LSDGD----YV-----SLGWHE-KD-DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFS 170 (486)
Q Consensus 106 ~S~~~----~~-----~~~~~~-~~-Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p----~v~~lVl~sp~~ 170 (486)
.|... +. ...+.. ++ |+.++++++.+..+.++++|+||||||.+++.+|..+| .|+++|+++|..
T Consensus 104 ~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~ 183 (377)
T 1k8q_A 104 WARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVA 183 (377)
T ss_dssp TSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCS
T ss_pred CCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCch
Confidence 99752 11 222222 45 88889999887767789999999999999999999998 499999999864
Q ss_pred CHHH---HH---H-----HHHHHHh--hhCCchhH---------------------------------------------
Q 011425 171 DLFD---LM---L-----ELVDVYK--IRLPKFTV--------------------------------------------- 192 (486)
Q Consensus 171 ~~~~---~~---~-----~~~~~~~--~~~p~~~~--------------------------------------------- 192 (486)
.... .. . .+...+. ...+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (377)
T 1k8q_A 184 TVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHN 263 (377)
T ss_dssp CCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTC
T ss_pred hcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccC
Confidence 3210 00 0 0000000 00000000
Q ss_pred ------HHHHHHHHHHHhh-hhccccc----cc-------chhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCc
Q 011425 193 ------KMAVQYMRRVIQK-KAKFDIM----DL-------NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDK 254 (486)
Q Consensus 193 ------~~~~~~~~~~~~~-~~~~~~~----~~-------~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~ 254 (486)
.....+....... ...++.. .. .....+.++++|+|+|+|++|.++|++.+..+++.+++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 343 (377)
T 1k8q_A 264 PAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLI 343 (377)
T ss_dssp CCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEE
T ss_pred CCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcCcc
Confidence 0000000000000 0000000 00 0112367789999999999999999999999999887654
Q ss_pred EEEEeCC-CCCCC-----ChHHHHHHHHHHHHH
Q 011425 255 NIIKFDG-DHNSS-----RPQFYYDSVSIFFYN 281 (486)
Q Consensus 255 ~l~~~~g-gH~~~-----~p~~~~~~I~~FL~~ 281 (486)
+++++++ ||+.. .++++++.|.+||.+
T Consensus 344 ~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 344 YHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred cEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 4888887 99854 578899999999975
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=199.86 Aligned_cols=235 Identities=16% Similarity=0.136 Sum_probs=162.2
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHH-HHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADAN-EAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~-~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
.....+.+.||..+.+.+|.|. .+++.|+|||+||++ ++...|. .++..|.+. |.|+++|+||+|.+..
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~~--- 75 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAK---NQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVSL--- 75 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCS---SSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSCH---
T ss_pred ceEEEEecCCcEEEEEEEEccC---CCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcccc---
Confidence 3567788899999999999886 335789999999998 6666554 677778776 9999999999987642
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHH----HHHHHhhhCC
Q 011425 113 SLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLE----LVDVYKIRLP 188 (486)
Q Consensus 113 ~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~----~~~~~~~~~p 188 (486)
...++|+.++++++.+..+..+++|+||||||.+++.+|.. +.|+++|+++|.......... ..........
T Consensus 76 ---~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T 3h04_A 76 ---DCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD-RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSIN 151 (275)
T ss_dssp ---HHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH-SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTTSC
T ss_pred ---chhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc-CCccEEEeccccccccccccccccchhhcccccch
Confidence 12378999999999998777899999999999999999999 669999999998754211100 0000000000
Q ss_pred -----------------chhHHHHHHHHHHH------HhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHH
Q 011425 189 -----------------KFTVKMAVQYMRRV------IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (486)
Q Consensus 189 -----------------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 245 (486)
.............. +................+..+. |+|+++|++|.++|++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~ 230 (275)
T 3h04_A 152 ETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESEH 230 (275)
T ss_dssp HHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHH
T ss_pred HHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCChHHHHH
Confidence 00000000000000 0000000000000112235666 99999999999999999999
Q ss_pred HHHHcCCCcEEEEeCC-CCCCC--Ch---HHHHHHHHHHHHHhcC
Q 011425 246 IFNAYAGDKNIIKFDG-DHNSS--RP---QFYYDSVSIFFYNVLH 284 (486)
Q Consensus 246 l~~~l~~~~~l~~~~g-gH~~~--~p---~~~~~~I~~FL~~~l~ 284 (486)
+++.++. .+++++++ ||... .+ +++.+.+.+||.+++.
T Consensus 231 ~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 231 IMNHVPH-STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp HHTTCSS-EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCC-ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 9988765 56888887 99866 33 6899999999998763
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-24 Score=205.56 Aligned_cols=207 Identities=19% Similarity=0.237 Sum_probs=155.8
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
+.+|+|||+||++++...|..++..|+++||.|+++|+||+|.|.+......+.. ++|+.++++++... ..+++|+|
T Consensus 38 g~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~i~l~G 115 (270)
T 3rm3_A 38 NGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQR--CQTIFVTG 115 (270)
T ss_dssp CSSEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTT--CSEEEEEE
T ss_pred CCCeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHhh--CCcEEEEE
Confidence 3569999999999999999999999999999999999999999975433333333 78899999999765 68999999
Q ss_pred EcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHH--h-----------------hhCCchhHHHHHHHHHHHH
Q 011425 143 RSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVY--K-----------------IRLPKFTVKMAVQYMRRVI 203 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~--~-----------------~~~p~~~~~~~~~~~~~~~ 203 (486)
|||||.+++.+|..+|+|+++|+++|+.............. . .............+.....
T Consensus 116 ~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (270)
T 3rm3_A 116 LSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMA 195 (270)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHHHHHHHHHHHH
T ss_pred EcHhHHHHHHHHHhCCCccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChhHHHHHHHHHH
Confidence 99999999999999999999999999876544332211000 0 0001111111221111110
Q ss_pred hhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-CcEEEEeCC-CCCCC--Ch-HHHHHHHHHH
Q 011425 204 QKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDG-DHNSS--RP-QFYYDSVSIF 278 (486)
Q Consensus 204 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~l~~~~g-gH~~~--~p-~~~~~~I~~F 278 (486)
+....+.++++|+|+++|++|.+++++.+..+++.++. .++++++++ ||... .+ +++.+.|.+|
T Consensus 196 -----------~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 264 (270)
T 3rm3_A 196 -----------QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEF 264 (270)
T ss_dssp -----------HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHH
T ss_pred -----------HHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHH
Confidence 12244567889999999999999999999999999875 458888986 99876 33 8899999999
Q ss_pred HHHhc
Q 011425 279 FYNVL 283 (486)
Q Consensus 279 L~~~l 283 (486)
|+++.
T Consensus 265 l~~~~ 269 (270)
T 3rm3_A 265 FAKHA 269 (270)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 98763
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-24 Score=202.33 Aligned_cols=216 Identities=11% Similarity=0.124 Sum_probs=144.6
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-CCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
..|+|||+||++++...|..++..|.+ ||.|+++|+||||.|..... ...+...+++.+.+..+.+..+.++++|+||
T Consensus 19 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gh 97 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQSAWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDALGIDCCAYVGH 97 (269)
T ss_dssp CSSEEEEECCTTCCGGGGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 568999999999999999999988888 99999999999999965211 1111122333333333333336689999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCccCH-----------HHHHHHHHHHHhhh------------CCchhHHHHHHHH
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDL-----------FDLMLELVDVYKIR------------LPKFTVKMAVQYM 199 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~~~-----------~~~~~~~~~~~~~~------------~p~~~~~~~~~~~ 199 (486)
||||.+++.+|..+|+ |+++|++++.... .............. ...........+.
T Consensus 98 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (269)
T 4dnp_A 98 SVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFS 177 (269)
T ss_dssp THHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCChhHHHHHH
Confidence 9999999999999998 9999999985421 11111111100000 0000000111111
Q ss_pred HHHHhhh------hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHH
Q 011425 200 RRVIQKK------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQF 270 (486)
Q Consensus 200 ~~~~~~~------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~ 270 (486)
....... ........+....+.++++|+|+++|++|.+++++.+..+.+.+++..+++++++ ||+.. .|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 257 (269)
T 4dnp_A 178 RTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTL 257 (269)
T ss_dssp HHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCHHHHCHHH
T ss_pred HHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCccccCHHH
Confidence 1110000 0000112234456678899999999999999999999999999977678888886 99866 7899
Q ss_pred HHHHHHHHHHH
Q 011425 271 YYDSVSIFFYN 281 (486)
Q Consensus 271 ~~~~I~~FL~~ 281 (486)
+.+.|.+||.+
T Consensus 258 ~~~~i~~fl~~ 268 (269)
T 4dnp_A 258 LAQELRRALSH 268 (269)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhh
Confidence 99999999865
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-24 Score=201.12 Aligned_cols=215 Identities=16% Similarity=0.139 Sum_probs=153.3
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC-C-Ccc-hHHHHHHHHHHHHhcCCCCcEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-L-GWH-EKDDLKVVVSYLRGNKQTSRIGL 140 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-~-~~~-~~~Dl~~~i~~l~~~~~~~~i~L 140 (486)
++.|+|||+||++++...|..++..|+++||.|+++|+||||.|...... . .+. .++|+.++++++... ..+++|
T Consensus 20 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~l 97 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK--YAKVFV 97 (251)
T ss_dssp CSSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT--CSEEEE
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh--cCCeEE
Confidence 46789999999999999999999999999999999999999999643211 1 111 268899999999876 679999
Q ss_pred EEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH----HHHHHHHHHHhhhCCch-hHHHHHHHHHHHHhhhhccccccc
Q 011425 141 WGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF----DLMLELVDVYKIRLPKF-TVKMAVQYMRRVIQKKAKFDIMDL 214 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~----~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~ 214 (486)
+||||||.+++.+|..+|+ ++++|+.+|..... .....+........... ............+..... ...
T Consensus 98 ~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 174 (251)
T 3dkr_A 98 FGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQ---FAT 174 (251)
T ss_dssp EESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH---HHH
T ss_pred EEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHHhhhHHHHHHHHH---HHH
Confidence 9999999999999999997 89999988876521 11111111111000000 111111111111110000 000
Q ss_pred chhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC--CcEEEEeCC-CCCCC---ChHHHHHHHHHHHHHhc
Q 011425 215 NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG--DKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 215 ~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~--~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~~~l 283 (486)
.....+.++++|+|+++|++|.+++++.+..+++.++. ..+++++++ ||... .++++.+.|.+||++..
T Consensus 175 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 175 TVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp HHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred HHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence 12345667889999999999999999999999999877 568899987 99875 38899999999998754
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-24 Score=198.34 Aligned_cols=200 Identities=18% Similarity=0.217 Sum_probs=157.7
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh--HHHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
+..+.+.+.. +|.++.++++.|. ++.|+||++||++++... +..++..|+++||.|+++|+||+|.|.....
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~-----~~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~ 83 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPN-----GATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLR 83 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCT-----TCCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHH
T ss_pred ceeeEEEEec-CCeEEEEEEecCC-----CCceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccch
Confidence 3456777775 9999999999875 367999999999988875 4468888988899999999999998764321
Q ss_pred C----CCcch-HHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHh
Q 011425 113 S----LGWHE-KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYK 184 (486)
Q Consensus 113 ~----~~~~~-~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~ 184 (486)
. ..+.. ++|+.++++++...... .+++++||||||.+++.++..+|+ |+++|++++....
T Consensus 84 ~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~------------ 151 (223)
T 2o2g_A 84 TRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL------------ 151 (223)
T ss_dssp HCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG------------
T ss_pred hhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc------------
Confidence 1 22222 68899999999887443 599999999999999999999997 9999999986431
Q ss_pred hhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CC
Q 011425 185 IRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DH 263 (486)
Q Consensus 185 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH 263 (486)
....+.++++|+|+++|++|.++|... .+..+......+++++++ +|
T Consensus 152 -------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~H 199 (223)
T 2o2g_A 152 -------------------------------APSALPHVKAPTLLIVGGYDLPVIAMN-EDALEQLQTSKRLVIIPRASH 199 (223)
T ss_dssp -------------------------------CTTTGGGCCSCEEEEEETTCHHHHHHH-HHHHHHCCSSEEEEEETTCCT
T ss_pred -------------------------------CHHHHhcCCCCEEEEEccccCCCCHHH-HHHHHhhCCCeEEEEeCCCCc
Confidence 012344567999999999999997554 455555556788999997 99
Q ss_pred CCCC---hHHHHHHHHHHHHHhcC
Q 011425 264 NSSR---PQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 264 ~~~~---p~~~~~~I~~FL~~~l~ 284 (486)
.... ++++.+.+.+||.++++
T Consensus 200 ~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 200 LFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp TCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred ccCChHHHHHHHHHHHHHHHHhcC
Confidence 8764 37899999999998763
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=207.19 Aligned_cols=231 Identities=17% Similarity=0.195 Sum_probs=152.5
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCCC----CCcc-
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVS----LGWH- 117 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~----~~~~- 117 (486)
..+|.++.|..+-+.. .+.+.++|||+||++++...|...+..|+. .||+|+++|+||||.|+..+.. ....
T Consensus 34 ~~~g~~l~y~~~G~~~--~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~~~ 111 (330)
T 3nwo_A 34 PFGDHETWVQVTTPEN--AQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTPQL 111 (330)
T ss_dssp EETTEEEEEEEECCSS--CCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGCCHHH
T ss_pred eecCcEEEEEEecCcc--CCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccccHHH
Confidence 3478999998885421 111234799999999988888887777875 5899999999999999763221 1211
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCC--------
Q 011425 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLP-------- 188 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p-------- 188 (486)
.++|+.++++.+ +.++++|+||||||.+++.+|.++|+ |.++|++++............. .....+
T Consensus 112 ~a~dl~~ll~~l----g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 186 (330)
T 3nwo_A 112 FVDEFHAVCTAL----GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGD-LRAQLPAETRAALD 186 (330)
T ss_dssp HHHHHHHHHHHH----TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHH-HHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHH-HHHhcCHHHHHHHH
Confidence 145555555555 67899999999999999999999998 9999999887653221100000 000000
Q ss_pred ---------c-hhHHHHHHHHHH------------------HHhhhh---------cc----cccccchhhhCCCCCCCE
Q 011425 189 ---------K-FTVKMAVQYMRR------------------VIQKKA---------KF----DIMDLNCLKLAPKTFIPA 227 (486)
Q Consensus 189 ---------~-~~~~~~~~~~~~------------------~~~~~~---------~~----~~~~~~~~~~l~~i~~Pv 227 (486)
. ........++.. ...... .+ .....+....+.+|++|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 266 (330)
T 3nwo_A 187 RHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPV 266 (330)
T ss_dssp HHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCSCE
T ss_pred HHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccCCCCe
Confidence 0 000000001100 000000 00 011223445677899999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 228 LFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 228 Lii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
|+|+|++|.++| ..+..+.+.++ +.+++++++ ||+.. .|+++.+.|.+||.+..
T Consensus 267 Lvi~G~~D~~~p-~~~~~~~~~ip-~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 267 LVIAGEHDEATP-KTWQPFVDHIP-DVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQHD 323 (330)
T ss_dssp EEEEETTCSSCH-HHHHHHHHHCS-SEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCccCh-HHHHHHHHhCC-CCcEEEeCCCCCchhhcCHHHHHHHHHHHHHhcc
Confidence 999999999876 46778888775 467888987 99876 89999999999998763
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=217.92 Aligned_cols=234 Identities=16% Similarity=0.152 Sum_probs=163.4
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~ 117 (486)
..+.+.+.||..|.+..+ +..|+|||+||++++...|..++..|+..||.|+++|+||||.|++......+.
T Consensus 4 i~~~~~~~dG~~l~y~~~--------G~gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~ 75 (456)
T 3vdx_A 4 ITVGQENSTSIDLYYEDH--------GTGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYD 75 (456)
T ss_dssp EEEEEETTEEEEEEEEEE--------SSSEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHH
T ss_pred EeecccccCCeEEEEEEe--------CCCCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHH
Confidence 567778889999997665 356999999999999999999999998889999999999999998765544443
Q ss_pred h-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH-------------HHHHHHHHH
Q 011425 118 E-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL-------------FDLMLELVD 181 (486)
Q Consensus 118 ~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~-------------~~~~~~~~~ 181 (486)
. ++|+.++++++ +.++++|+||||||.+++.+|+.+ |+ |+++|++++.... ......+..
T Consensus 76 ~~a~dl~~~l~~l----~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (456)
T 3vdx_A 76 TFAADLNTVLETL----DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVA 151 (456)
T ss_dssp HHHHHHHHHHHHH----TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHh----CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHH
Confidence 2 66677777766 567999999999999999988887 66 9999999886521 111111111
Q ss_pred H---------------HhhhCC----chhHHHHHHHHHHHHhhh-----hcccccccchhhhCCCCCCCEEEEEeCCCCC
Q 011425 182 V---------------YKIRLP----KFTVKMAVQYMRRVIQKK-----AKFDIMDLNCLKLAPKTFIPALFGHASEDKF 237 (486)
Q Consensus 182 ~---------------~~~~~p----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~ 237 (486)
. +..... .........+........ ........+....+.++++|+|+|+|++|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~ 231 (456)
T 3vdx_A 152 AVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRT 231 (456)
T ss_dssp HHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEETTCSS
T ss_pred hhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeCCCCC
Confidence 0 000000 001111111111110000 0000112234456788999999999999999
Q ss_pred CCHH-HHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhcC
Q 011425 238 IRAR-HSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 238 vp~~-~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l~ 284 (486)
+|++ ....+.+.+ ...+++++++ ||+.. .|+.+.+.|.+||.+.+.
T Consensus 232 vp~~~~~~~l~~~~-~~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 232 LPIENTARVFHKAL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp SCGGGTHHHHHHHC-TTSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHC-CCceEEEeCCCCCcchhhCHHHHHHHHHHHHHHhhc
Confidence 9998 556666655 4578888987 99866 799999999999998764
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.4e-24 Score=207.99 Aligned_cols=232 Identities=13% Similarity=0.072 Sum_probs=151.6
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC-CCCCCCCCCCCc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSLGW 116 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~-G~S~~~~~~~~~ 116 (486)
+...+. .+|..+.++.+ +.+..|+|||+||++++...|..++..|++ ||.|+++|+||+ |.|........
T Consensus 46 ~~~~v~-~~~~~~~~~~~------g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~~~~~- 116 (306)
T 2r11_A 46 KSFYIS-TRFGQTHVIAS------GPEDAPPLVLLHGALFSSTMWYPNIADWSS-KYRTYAVDIIGDKNKSIPENVSGT- 116 (306)
T ss_dssp EEEEEC-CTTEEEEEEEE------SCTTSCEEEEECCTTTCGGGGTTTHHHHHH-HSEEEEECCTTSSSSCEECSCCCC-
T ss_pred ceEEEe-cCCceEEEEee------CCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEecCCCCCCCCCCCCCCCC-
Confidence 444444 35557777665 224578999999999999999988888887 999999999999 88765433222
Q ss_pred chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 117 HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 117 ~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
.+++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|+++|...........................
T Consensus 117 --~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (306)
T 2r11_A 117 --RTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETF 194 (306)
T ss_dssp --HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHH
T ss_pred --HHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHH
Confidence 34444444444444467899999999999999999999997 999999998764311100000000000000000000
Q ss_pred HHH-----------------HHHHHhh-hhccc-----ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC
Q 011425 196 VQY-----------------MRRVIQK-KAKFD-----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG 252 (486)
Q Consensus 196 ~~~-----------------~~~~~~~-~~~~~-----~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~ 252 (486)
..+ ....+.. ...+. .........+.++++|+|+++|++|.+++++.+.++.+....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 274 (306)
T 2r11_A 195 LNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVP 274 (306)
T ss_dssp HHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHST
T ss_pred HHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCC
Confidence 000 0000000 00000 001122345667899999999999999999988876665445
Q ss_pred CcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 253 DKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 253 ~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
+.+++++++ ||+.. .++++.+.|.+||+
T Consensus 275 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 275 DIEAEVIKNAGHVLSMEQPTYVNERVMRFFN 305 (306)
T ss_dssp TCEEEEETTCCTTHHHHSHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCCcccCHHHHHHHHHHHHh
Confidence 678999997 99866 78999999999985
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=199.91 Aligned_cols=217 Identities=13% Similarity=0.101 Sum_probs=143.1
Q ss_pred CCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH-HHHHHHhcCCCCcEEEE
Q 011425 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~i~Lv 141 (486)
..++|+|||+||++++...|..++..|.++||.|+++|+||||.|....... ...+++.+ +.+.+......++++|+
T Consensus 9 ~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~--~~~~~~~~~~~~~l~~l~~~~~~~lv 86 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQI--PNFSDYLSPLMEFMASLPANEKIILV 86 (267)
T ss_dssp -CCCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGC--CSHHHHHHHHHHHHHTSCTTSCEEEE
T ss_pred CCCCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCCcc--CCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 3567999999999999999999999999999999999999999998764321 12233333 33333333246899999
Q ss_pred EEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH-----HHHHHHHHHHhhhC-C---------------chhH-------
Q 011425 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLELVDVYKIRL-P---------------KFTV------- 192 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~-----~~~~~~~~~~~~~~-p---------------~~~~------- 192 (486)
||||||.+++.+|..+|+ |+++|++++..... .............. . ....
T Consensus 87 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (267)
T 3sty_A 87 GHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNV 166 (267)
T ss_dssp EETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHHT
T ss_pred EEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHhh
Confidence 999999999999999997 99999998865321 11111100000000 0 0000
Q ss_pred -----HHHHHHHHHHHhhhhccc---ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CC
Q 011425 193 -----KMAVQYMRRVIQKKAKFD---IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DH 263 (486)
Q Consensus 193 -----~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH 263 (486)
.................. +............++|+|+|+|++|.+++++....+.+.++. .+++++++ ||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH 245 (267)
T 3sty_A 167 YHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPP-DEVKEIEGSDH 245 (267)
T ss_dssp STTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCC-SEEEECTTCCS
T ss_pred cccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCC-ceEEEeCCCCc
Confidence 000111111110000000 000011111222369999999999999999999999999865 68888975 99
Q ss_pred CCC--ChHHHHHHHHHHHHHh
Q 011425 264 NSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 264 ~~~--~p~~~~~~I~~FL~~~ 282 (486)
+.+ .|+++.+.|.+|+.++
T Consensus 246 ~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 246 VTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp CHHHHSHHHHHHHHHHHHHHC
T ss_pred cccccChHHHHHHHHHHHHhc
Confidence 866 8999999999999864
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-23 Score=202.01 Aligned_cols=230 Identities=13% Similarity=0.032 Sum_probs=148.1
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~ 118 (486)
+...+|..+.+..+ ++...|+|||+||++ ++...|..++..|.+. |+|+++|+||||.|+..... . ..
T Consensus 11 ~~~~~g~~l~y~~~------g~~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~-~-~~ 81 (285)
T 1c4x_A 11 RFPSGTLASHALVA------GDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIGFGQSEYPETY-P-GH 81 (285)
T ss_dssp EECCTTSCEEEEEE------SCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTTSTTSCCCSSC-C-SS
T ss_pred EEEECCEEEEEEec------CCCCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCCCCCCCCCCCc-c-cc
Confidence 44568888887765 212345699999997 6667787888888774 99999999999999754321 1 11
Q ss_pred HHHH----HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH----HHHHHHHH---------
Q 011425 119 KDDL----KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL----FDLMLELV--------- 180 (486)
Q Consensus 119 ~~Dl----~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~----~~~~~~~~--------- 180 (486)
.+++ .+.+..+.+..+.++++|+||||||.+++.+|.++|+ |+++|++++.... ........
T Consensus 82 ~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (285)
T 1c4x_A 82 IMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLT 161 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHH
T ss_pred hhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhccccHH
Confidence 2333 3333333333366899999999999999999999997 9999999875421 00010000
Q ss_pred ---HHHhhh--CCc-h--hHHHHHHHHH---------HHHhh---hhcccccccchhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 181 ---DVYKIR--LPK-F--TVKMAVQYMR---------RVIQK---KAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 181 ---~~~~~~--~p~-~--~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
...... .+. . .......... ..... ...+..........+.++++|+|+|+|++|.++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~ 241 (285)
T 1c4x_A 162 PYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPL 241 (285)
T ss_dssp HHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCT
T ss_pred HHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeCH
Confidence 000000 000 0 0011100000 00000 00000001112345678999999999999999999
Q ss_pred HHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 241 RHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 241 ~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+.++.+++.+++ .+++++++ ||+.. .|+++.+.|.+||.+
T Consensus 242 ~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 242 DTSLYLTKHLKH-AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp HHHHHHHHHCSS-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC-ceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 999999988864 67888887 99866 789999999999974
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-23 Score=203.39 Aligned_cols=224 Identities=17% Similarity=0.176 Sum_probs=153.3
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl 122 (486)
..+|..+.+..+ ++.|+||++||++++...|..++..|++ ||.|+++|+||+|.|........... ++|+
T Consensus 54 ~~~~~~~~~~~~--------g~~p~vv~lhG~~~~~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~dl 124 (314)
T 3kxp_A 54 DIGRITLNVREK--------GSGPLMLFFHGITSNSAVFEPLMIRLSD-RFTTIAVDQRGHGLSDKPETGYEANDYADDI 124 (314)
T ss_dssp ECSSCEEEEEEE--------CCSSEEEEECCTTCCGGGGHHHHHTTTT-TSEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred EECCEEEEEEec--------CCCCEEEEECCCCCCHHHHHHHHHHHHc-CCeEEEEeCCCcCCCCCCCCCCCHHHHHHHH
Confidence 457888887765 2378999999999999999999999888 69999999999999984443333221 4445
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhh----------------
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKI---------------- 185 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~---------------- 185 (486)
.++++++ +.++++|+||||||.+++.+|..+|+ |+++|++++.................
T Consensus 125 ~~~l~~l----~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (314)
T 3kxp_A 125 AGLIRTL----ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYL 200 (314)
T ss_dssp HHHHHHH----TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHHHHHHH
T ss_pred HHHHHHh----CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHHHHHHH
Confidence 5555544 56899999999999999999999997 99999998765433222111111110
Q ss_pred --hCCchhHHHHHHHHHHHHhhhhc-c-------------cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHH
Q 011425 186 --RLPKFTVKMAVQYMRRVIQKKAK-F-------------DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249 (486)
Q Consensus 186 --~~p~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 249 (486)
..+.........+....+..... + .....+....+.++++|+|+++|++|.+++++.+..+.+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~ 280 (314)
T 3kxp_A 201 AGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRL 280 (314)
T ss_dssp HHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHh
Confidence 01111111111111110000000 0 0000023344567899999999999999999999999998
Q ss_pred cCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 250 YAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 250 l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
++. .+++++++ ||+.. .++.+.+.|.+||++
T Consensus 281 ~~~-~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 281 RPD-LPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp CTT-SCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred CCC-ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 855 57888887 99966 788999999999963
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=209.44 Aligned_cols=239 Identities=20% Similarity=0.228 Sum_probs=170.9
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC--CC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD--YV 112 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~--~~ 112 (486)
+..+++.+.+.||..|.++++.|.+. .++.|+||++||+++....+ .....|+.+||.|+++|+||+|.|.+. ..
T Consensus 66 ~~~~~~~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~~~-~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~ 142 (337)
T 1vlq_A 66 VEAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGFP-HDWLFWPSMGYICFVMDTRGQGSGWLKGDTP 142 (337)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCCCG-GGGCHHHHTTCEEEEECCTTCCCSSSCCCCC
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCCCCc-hhhcchhhCCCEEEEecCCCCCCcccCCCCc
Confidence 45688999999999999999999742 45689999999999876543 344466778999999999999976532 11
Q ss_pred C---------------CC------c---chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEc
Q 011425 113 S---------------LG------W---HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLD 166 (486)
Q Consensus 113 ~---------------~~------~---~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~ 166 (486)
. .+ + ..++|+.++++++.+.... .+++|+||||||.+++.+|...|+|+++|+.
T Consensus 143 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~v~~~vl~ 222 (337)
T 1vlq_A 143 DYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCD 222 (337)
T ss_dssp BCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSSCCEEEEE
T ss_pred ccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCCCccEEEEC
Confidence 1 00 0 2378999999999987544 5899999999999999999999999999999
Q ss_pred CCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhh--hhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHH
Q 011425 167 SAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQK--KAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSD 244 (486)
Q Consensus 167 sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~ 244 (486)
+|+.......... ...........++...... .........++...+.++++|+|+++|+.|.++|+..+.
T Consensus 223 ~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~ 295 (337)
T 1vlq_A 223 VPFLCHFRRAVQL-------VDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVF 295 (337)
T ss_dssp SCCSCCHHHHHHH-------CCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHH
T ss_pred CCcccCHHHHHhc-------CCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHH
Confidence 9866533222110 0011111111111100000 000001122455566788999999999999999999999
Q ss_pred HHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 245 LIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 245 ~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
.+++.+...++++++++ ||... .....+.+.+||.+++.
T Consensus 296 ~~~~~l~~~~~~~~~~~~gH~~~-~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 296 AAYNYYAGPKEIRIYPYNNHEGG-GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp HHHHHCCSSEEEEEETTCCTTTT-HHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCcEEEEcCCCCCCCc-chhhHHHHHHHHHHHHh
Confidence 99999987788999998 99864 34677899999998875
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-23 Score=201.06 Aligned_cols=224 Identities=10% Similarity=0.034 Sum_probs=144.3
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC---CCcchHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS---LGWHEKD 120 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~---~~~~~~~ 120 (486)
..+|..|+|..+ +..|+|||+||++++...|..++..|++. |+|+++|+||||.|+.. .. ..+ ..+
T Consensus 15 ~~~g~~l~y~~~--------G~g~~lvllHG~~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~~~~~~~-~~~ 83 (294)
T 1ehy_A 15 QLPDVKIHYVRE--------GAGPTLLLLHGWPGFWWEWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-DLNDLSKY-SLD 83 (294)
T ss_dssp ECSSCEEEEEEE--------ECSSEEEEECCSSCCGGGGHHHHHHHHTT-SEEEEECCTTSTTSCCC-CTTCGGGG-CHH
T ss_pred EECCEEEEEEEc--------CCCCEEEEECCCCcchhhHHHHHHHHhhc-CEEEecCCCCCCCCCCC-ccccccCc-CHH
Confidence 458889988765 24579999999999999999999999875 99999999999999864 20 012 234
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC-HH-HHHH---------------HHH--
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-LF-DLML---------------ELV-- 180 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~-~~-~~~~---------------~~~-- 180 (486)
++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++... .. .... .+.
T Consensus 84 ~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
T 1ehy_A 84 KAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVE 163 (294)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcchhHH
Confidence 444444444444477899999999999999999999998 999999986321 11 0000 000
Q ss_pred -------------HHHhhh-C---CchhHHHHHHHHHHHHhh---------hhcc--cccccchhhhCCCCCCCEEEEEe
Q 011425 181 -------------DVYKIR-L---PKFTVKMAVQYMRRVIQK---------KAKF--DIMDLNCLKLAPKTFIPALFGHA 232 (486)
Q Consensus 181 -------------~~~~~~-~---p~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~~~~~l~~i~~PvLii~G 232 (486)
..+... . ..+.......+....... .... ..........+.++++|+|+|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G 243 (294)
T 1ehy_A 164 VVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWG 243 (294)
T ss_dssp HHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEE
T ss_pred HhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEEEe
Confidence 000000 0 000000001111100000 0000 00000000134478999999999
Q ss_pred CCCCCCC-HHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHH
Q 011425 233 SEDKFIR-ARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFF 279 (486)
Q Consensus 233 ~~D~~vp-~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL 279 (486)
++|.++| ......+.+.++ +.+++++++ ||+.. .|+++.+.|.+||
T Consensus 244 ~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 244 LGDTCVPYAPLIEFVPKYYS-NYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp CCSSCCTTHHHHHHHHHHBS-SEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred CCCCCcchHHHHHHHHHHcC-CCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 9999998 356677777665 467888887 99966 7999999999996
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-23 Score=201.27 Aligned_cols=227 Identities=15% Similarity=0.110 Sum_probs=147.7
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
..+|.++.+..+ +..|+|||+||++ ++...|..++..|.+. |.|+++|+||||.|. ... ..+ ..+
T Consensus 22 ~~~g~~l~y~~~--------g~g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~-~~~-~~~ 89 (296)
T 1j1i_A 22 NAGGVETRYLEA--------GKGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFGKTA-KPD-IEY-TQD 89 (296)
T ss_dssp EETTEEEEEEEE--------CCSSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTSTTSC-CCS-SCC-CHH
T ss_pred EECCEEEEEEec--------CCCCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCCCCCC-CCC-CCC-CHH
Confidence 347888887664 2357899999998 6667787888888775 999999999999998 322 111 133
Q ss_pred HHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH---H-------------HHHHHHHH
Q 011425 121 DLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF---D-------------LMLELVDV 182 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~---~-------------~~~~~~~~ 182 (486)
++.+.+..+.+..+. ++++|+||||||.+++.+|.++|+ |+++|++++..... . .+......
T Consensus 90 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (296)
T 1j1i_A 90 RRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKA 169 (296)
T ss_dssp HHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHHHHHH
Confidence 333333333333366 799999999999999999999998 99999998754210 0 01111111
Q ss_pred HhhhCCchhHHHHHH------------HHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 183 YKIRLPKFTVKMAVQ------------YMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
+.............. .+...+...... ....+....+.++++|+|+|+|++|.++|++.+..+.+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~ 248 (296)
T 1j1i_A 170 LTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQ-GGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI 248 (296)
T ss_dssp HSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH-TSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred hccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhc-ccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHC
Confidence 100000000000000 000001000000 0011223456789999999999999999999999999888
Q ss_pred CCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhcC
Q 011425 251 AGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 251 ~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l~ 284 (486)
+. .+++++++ ||+.. .|+++.+.|.+||.+.+.
T Consensus 249 ~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 284 (296)
T 1j1i_A 249 DD-SWGYIIPHCGHWAMIEHPEDFANATLSFLSLRVD 284 (296)
T ss_dssp TT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC--
T ss_pred CC-CEEEEECCCCCCchhcCHHHHHHHHHHHHhccCC
Confidence 54 57888886 99866 799999999999998763
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-23 Score=199.06 Aligned_cols=226 Identities=16% Similarity=0.097 Sum_probs=154.4
Q ss_pred EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH-HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc-hHH
Q 011425 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH-EKD 120 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~-~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~-~~~ 120 (486)
...+|.++.+... +..|+|||+||++++...|. .++..|++.||.|+++|+||+|.|..... .... .++
T Consensus 28 ~~~~~~~l~y~~~--------g~~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~ 98 (293)
T 3hss_A 28 PEFRVINLAYDDN--------GTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEG-FTTQTMVA 98 (293)
T ss_dssp TTSCEEEEEEEEE--------CSSEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCS-CCHHHHHH
T ss_pred cccccceEEEEEc--------CCCCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCccc-CCHHHHHH
Confidence 3456677776554 35689999999999999998 67888888899999999999998875432 2221 145
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHH---HHHHh---hhCCchhHH
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL---VDVYK---IRLPKFTVK 193 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~---~~~~~---~~~p~~~~~ 193 (486)
|+.++++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++........... ..... ...+.....
T Consensus 99 ~~~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (293)
T 3hss_A 99 DTAALIETL----DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDA 174 (293)
T ss_dssp HHHHHHHHH----TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHhc----CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHH
Confidence 555555555 66899999999999999999999998 99999999876432211111 00000 000000000
Q ss_pred H-----------------HHHHHHHHHhhh---------hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHH
Q 011425 194 M-----------------AVQYMRRVIQKK---------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIF 247 (486)
Q Consensus 194 ~-----------------~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~ 247 (486)
. ...+........ ........+....+.++++|+|+++|++|.++|++.+..+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~ 254 (293)
T 3hss_A 175 RARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVA 254 (293)
T ss_dssp HHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred HHHHhhhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 0 000000000000 00001122344566789999999999999999999999999
Q ss_pred HHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 248 NAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 248 ~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
+.+++ .+++++++ ||+.. .|+++.+.|.+||.+.
T Consensus 255 ~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 255 DALPN-GRYLQIPDAGHLGFFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp HHSTT-EEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred HHCCC-ceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence 98854 67888887 99866 7899999999999864
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=215.86 Aligned_cols=240 Identities=13% Similarity=0.188 Sum_probs=164.7
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHH-HhccCCeEEEEEcCCCCCCCCCCCCCCCc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV-ILLPSNITLFTLDFSGSGLSDGDYVSLGW 116 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~-~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~ 116 (486)
+.+.++. +|..|.++++ |. +.++.|+||++||++++...|..... .++.+||.|+++|+||+|.|.+.......
T Consensus 136 ~~~~i~~-~~~~l~~~~~-~~---~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 210 (405)
T 3fnb_A 136 KSIEVPF-EGELLPGYAI-IS---EDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEV 210 (405)
T ss_dssp EEEEEEE-TTEEEEEEEE-CC---SSSCCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCCCS
T ss_pred EEEEEeE-CCeEEEEEEE-cC---CCCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCCCc
Confidence 4555554 6888998777 32 33456999999999999988866543 56678999999999999999754444444
Q ss_pred chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhH----
Q 011425 117 HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTV---- 192 (486)
Q Consensus 117 ~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~---- 192 (486)
...+|+.++++++.... .+++|+||||||++++.+|..+|.|+++|+++|..++............ ..+....
T Consensus 211 ~~~~d~~~~~~~l~~~~--~~v~l~G~S~GG~~a~~~a~~~p~v~~~v~~~p~~~~~~~~~~~~~~~~-~~p~~~~~~~~ 287 (405)
T 3fnb_A 211 DARAAISAILDWYQAPT--EKIAIAGFSGGGYFTAQAVEKDKRIKAWIASTPIYDVAEVFRISFSTAL-KAPKTILKWGS 287 (405)
T ss_dssp CTHHHHHHHHHHCCCSS--SCEEEEEETTHHHHHHHHHTTCTTCCEEEEESCCSCHHHHHHHHCC---------------
T ss_pred cHHHHHHHHHHHHHhcC--CCEEEEEEChhHHHHHHHHhcCcCeEEEEEecCcCCHHHHHHHhhhhhh-hCcHHHHHHHH
Confidence 45789999999997764 7999999999999999999999999999999999987654432211100 0011000
Q ss_pred ----------HHHHHHHHHHHhhhhc----ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcE
Q 011425 193 ----------KMAVQYMRRVIQKKAK----FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKN 255 (486)
Q Consensus 193 ----------~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~ 255 (486)
..........+..... ...........+.++++|+|+|+|+.|.+++++.+..+++.++ ..++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~ 367 (405)
T 3fnb_A 288 KLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVT 367 (405)
T ss_dssp ----CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCce
Confidence 0000000000000000 0000001111256788999999999999999999999999984 4678
Q ss_pred EEEeCC----CCCCC--ChHHHHHHHHHHHHHhcCC
Q 011425 256 IIKFDG----DHNSS--RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 256 l~~~~g----gH~~~--~p~~~~~~I~~FL~~~l~~ 285 (486)
++++++ +|+.. .++.+.+.|.+||++++..
T Consensus 368 l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 368 LRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp EEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred EEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 888954 34433 6789999999999998853
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=200.47 Aligned_cols=198 Identities=18% Similarity=0.247 Sum_probs=159.6
Q ss_pred eeEEEEEEEcC--CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNA--RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 35 ~~~~~i~~~~~--dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
|..+.+.+... +|.. .+.+|+|... ..++.|+|||+||++++...|..++..|+++||.|+++|+||+|.+..
T Consensus 23 ~~~~~~~~~~~~~~~~~-~~~l~~p~~~-~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~--- 97 (262)
T 1jfr_A 23 YATSQTSVSSLVASGFG-GGTIYYPTST-ADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD--- 97 (262)
T ss_dssp SCEEEEEECTTTCSSSC-CEEEEEESCC-TTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH---
T ss_pred CCccceEecceeccCCC-ceeEEecCCC-CCCCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCc---
Confidence 44455666554 3332 4556777642 235679999999999999999999999999999999999999997642
Q ss_pred CCCcchHHHHHHHHHHHHh------cCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhh
Q 011425 113 SLGWHEKDDLKVVVSYLRG------NKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIR 186 (486)
Q Consensus 113 ~~~~~~~~Dl~~~i~~l~~------~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~ 186 (486)
....|+..+++++.+ ..+..+++|+||||||.+++.+|..+|+|+++|+++|+..
T Consensus 98 ----~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~p~~~--------------- 158 (262)
T 1jfr_A 98 ----SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTGWNT--------------- 158 (262)
T ss_dssp ----HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCCS---------------
T ss_pred ----hhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCccceEEEeecccCc---------------
Confidence 225788889999987 2234789999999999999999999999999999988642
Q ss_pred CCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH-HHHHHHHcCC--CcEEEEeCC-C
Q 011425 187 LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH-SDLIFNAYAG--DKNIIKFDG-D 262 (486)
Q Consensus 187 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~l~~~l~~--~~~l~~~~g-g 262 (486)
...+..+++|+|+++|++|.+++++. +..+++.+.. ..+++++++ |
T Consensus 159 ------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 208 (262)
T 1jfr_A 159 ------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGAS 208 (262)
T ss_dssp ------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCC
T ss_pred ------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCC
Confidence 13455678999999999999999998 9999999864 458888988 9
Q ss_pred CCCC--ChHHHHHHHHHHHHHhcCCC
Q 011425 263 HNSS--RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 263 H~~~--~p~~~~~~I~~FL~~~l~~~ 286 (486)
|... .++++.+.+.+||.+++...
T Consensus 209 H~~~~~~~~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 209 HFTPNTSDTTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp TTGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred cCCcccchHHHHHHHHHHHHHHhcCc
Confidence 9876 56899999999999998653
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-23 Score=203.15 Aligned_cols=230 Identities=12% Similarity=0.150 Sum_probs=148.6
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC--CC--CCC
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD--YV--SLG 115 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~--~~--~~~ 115 (486)
..+...+|..|.+..+ + ..|+|||+||++++...|..++..|.+.||+|+++|+||||.|+.. .. ...
T Consensus 13 ~~~~~~~g~~l~y~~~------G--~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~ 84 (328)
T 2cjp_A 13 HKMVAVNGLNMHLAEL------G--EGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFS 84 (328)
T ss_dssp EEEEEETTEEEEEEEE------C--SSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGS
T ss_pred eeEecCCCcEEEEEEc------C--CCCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCccccc
Confidence 3445568989988765 2 3589999999999999999999999888999999999999999764 21 122
Q ss_pred cch-HHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC-------HHHHHHHHHHH--
Q 011425 116 WHE-KDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-------LFDLMLELVDV-- 182 (486)
Q Consensus 116 ~~~-~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~-------~~~~~~~~~~~-- 182 (486)
+.. ++|+.++++.+ + .++++|+||||||.+++.+|..+|+ |+++|++++... ....+......
T Consensus 85 ~~~~a~dl~~~l~~l----~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T 2cjp_A 85 ILHLVGDVVALLEAI----APNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDH 160 (328)
T ss_dssp HHHHHHHHHHHHHHH----CTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTB
T ss_pred HHHHHHHHHHHHHHh----cCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccch
Confidence 211 55666666665 4 6899999999999999999999998 999999885431 11111110000
Q ss_pred H--hhhCCchhH---H--HHHHHHHHHHh------------------------------------------hhh------
Q 011425 183 Y--KIRLPKFTV---K--MAVQYMRRVIQ------------------------------------------KKA------ 207 (486)
Q Consensus 183 ~--~~~~p~~~~---~--~~~~~~~~~~~------------------------------------------~~~------ 207 (486)
+ ....+.... . .....+...+. ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T 2cjp_A 161 YISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVN 240 (328)
T ss_dssp HHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHH
T ss_pred HHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHH
Confidence 0 000000000 0 00001111110 000
Q ss_pred cccccc--cch--hhhCCCCCCCEEEEEeCCCCCCCHHH------HHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHH
Q 011425 208 KFDIMD--LNC--LKLAPKTFIPALFGHASEDKFIRARH------SDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDS 274 (486)
Q Consensus 208 ~~~~~~--~~~--~~~l~~i~~PvLii~G~~D~~vp~~~------~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~ 274 (486)
.+.... ... ...+.++++|+|+|+|++|.++|+.. +..+.+.+++.++++++++ ||+.. .|+++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~e~p~~~~~~ 320 (328)
T 2cjp_A 241 YYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKH 320 (328)
T ss_dssp HHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHHSHHHHHHH
T ss_pred HHHhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcchhCHHHHHHH
Confidence 000000 000 01357899999999999999998642 2455666654326888887 99876 79999999
Q ss_pred HHHHHHH
Q 011425 275 VSIFFYN 281 (486)
Q Consensus 275 I~~FL~~ 281 (486)
|.+||.+
T Consensus 321 i~~fl~~ 327 (328)
T 2cjp_A 321 IYDFIQK 327 (328)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999964
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=212.74 Aligned_cols=243 Identities=11% Similarity=0.066 Sum_probs=162.5
Q ss_pred EEcCCCcEEEEEEEecCCC---CCCCCCcEEEEeCCCCCChhhHHHHHHHhc----cCCe---EEEEEcCCCCCCCCCCC
Q 011425 42 IRNARGHVLQCSHYMPSPF---PEDTPLPCVVYCHGNSGCRADANEAAVILL----PSNI---TLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~---~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~----~~Gy---~Vv~~D~rG~G~S~~~~ 111 (486)
+...||..|.+..|.|.+. +..++.|+|||+||++++...|..++..|+ ..|| .|+++|+||||.|....
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~ 104 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRN 104 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHT
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCC
Confidence 5578999999999987531 112446899999999999999999998898 3489 99999999999987432
Q ss_pred C-----CCCcc-hHHHHHHHHHHHHhcCCCCc--EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH----------
Q 011425 112 V-----SLGWH-EKDDLKVVVSYLRGNKQTSR--IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---------- 172 (486)
Q Consensus 112 ~-----~~~~~-~~~Dl~~~i~~l~~~~~~~~--i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~---------- 172 (486)
. ...+. .++|+.++++.+....+..+ ++|+||||||.+++.+|..+|+ |+++|+++|....
T Consensus 105 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 184 (398)
T 2y6u_A 105 RGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPG 184 (398)
T ss_dssp TTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCTT
T ss_pred ccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccccccccc
Confidence 1 12221 14555555555432212334 9999999999999999999998 9999999886542
Q ss_pred ---------HHHHHHHHHHHhh----------------hCCchhHHHHHHHHHHHHhh--------------------hh
Q 011425 173 ---------FDLMLELVDVYKI----------------RLPKFTVKMAVQYMRRVIQK--------------------KA 207 (486)
Q Consensus 173 ---------~~~~~~~~~~~~~----------------~~p~~~~~~~~~~~~~~~~~--------------------~~ 207 (486)
......+...... ............+....... ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (398)
T 2y6u_A 185 LPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLL 264 (398)
T ss_dssp CCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSCHHHHHH
T ss_pred ccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCCchhhhh
Confidence 0111111110000 00000011111111100000 00
Q ss_pred cccc---cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 208 KFDI---MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 208 ~~~~---~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
.+.. ...+....+..+++|+|+|+|++|.++|++.+..+++.++ ..+++++++ ||+.. .++++.+.|.+||.+
T Consensus 265 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 343 (398)
T 2y6u_A 265 CYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ-NYHLDVIPGGSHLVNVEAPDLVIERINHHIHE 343 (398)
T ss_dssp TTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS-SEEEEEETTCCTTHHHHSHHHHHHHHHHHHHH
T ss_pred hhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC-CceEEEeCCCCccchhcCHHHHHHHHHHHHHH
Confidence 0000 0112335677889999999999999999999999999886 467888987 99866 789999999999998
Q ss_pred hcCC
Q 011425 282 VLHP 285 (486)
Q Consensus 282 ~l~~ 285 (486)
++..
T Consensus 344 ~~~~ 347 (398)
T 2y6u_A 344 FVLT 347 (398)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8753
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=206.72 Aligned_cols=220 Identities=12% Similarity=0.098 Sum_probs=144.7
Q ss_pred cEEEEEEEecCCCCCCCC-CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC--CCCcch-HHHHH
Q 011425 48 HVLQCSHYMPSPFPEDTP-LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV--SLGWHE-KDDLK 123 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~-~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~--~~~~~~-~~Dl~ 123 (486)
.+|+|..+-| .. .|+|||+||++++...|..++..|.++||+|+++|+||||.|+.... .+.... ++|+.
T Consensus 33 ~~l~y~~~G~------~~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~dl~ 106 (297)
T 2xt0_A 33 LRMHYVDEGP------RDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLL 106 (297)
T ss_dssp CCEEEEEESC------TTCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHH
T ss_pred eEEEEEEccC------CCCCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCHHHHHHHHH
Confidence 8888877632 23 68999999999999999999999998899999999999999985332 222211 45555
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH----HHHHHHHHHHHhhhCCchhH------
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL----FDLMLELVDVYKIRLPKFTV------ 192 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~----~~~~~~~~~~~~~~~p~~~~------ 192 (486)
++++.+ +.++++|+||||||.+++.+|.++|+ |+++|++++.... ......+..... ..+....
T Consensus 107 ~ll~~l----~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 181 (297)
T 2xt0_A 107 AFLDAL----QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVA-NSPDLDVGKLMQR 181 (297)
T ss_dssp HHHHHH----TCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHH-TCTTCCHHHHHHH
T ss_pred HHHHHh----CCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhh-cccccchhHHHhc
Confidence 555555 67899999999999999999999998 9999999874310 000111111000 0111100
Q ss_pred -------HHHHHHHHHHHhhh------hcc-ccc-----------ccchhhhCC-CCCCCEEEEEeCCCCCCCHHHHHHH
Q 011425 193 -------KMAVQYMRRVIQKK------AKF-DIM-----------DLNCLKLAP-KTFIPALFGHASEDKFIRARHSDLI 246 (486)
Q Consensus 193 -------~~~~~~~~~~~~~~------~~~-~~~-----------~~~~~~~l~-~i~~PvLii~G~~D~~vp~~~~~~l 246 (486)
.....+.. .+... ..+ ... ..+....+. ++++|+|+|+|++|.+++ ..+..+
T Consensus 182 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~ 259 (297)
T 2xt0_A 182 AIPGITDAEVAAYDA-PFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMGM 259 (297)
T ss_dssp HSTTCCHHHHHHHHT-TCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHHH
T ss_pred cCccCCHHHHHHHhc-cccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHHH
Confidence 00000000 00000 000 000 001223456 899999999999999999 888888
Q ss_pred HHHcCCCc-EEEEeCC-CCCCC-ChHHHHHHHHHHHH
Q 011425 247 FNAYAGDK-NIIKFDG-DHNSS-RPQFYYDSVSIFFY 280 (486)
Q Consensus 247 ~~~l~~~~-~l~~~~g-gH~~~-~p~~~~~~I~~FL~ 280 (486)
.+.+++.. .++.+++ ||+.. .|+++.+.|.+||.
T Consensus 260 ~~~~p~~~~~~~~~~~~GH~~~~~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 260 LRQAIRGCPEPMIVEAGGHFVQEHGEPIARAALAAFG 296 (297)
T ss_dssp HHHHSTTCCCCEEETTCCSSGGGGCHHHHHHHHHHTT
T ss_pred HHhCCCCeeEEeccCCCCcCcccCHHHHHHHHHHHHh
Confidence 88887543 2233555 99855 78999999999984
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-23 Score=199.21 Aligned_cols=224 Identities=17% Similarity=0.168 Sum_probs=144.9
Q ss_pred C--cEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHH-HHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 47 G--HVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAA-VILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 47 G--~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~-~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
| .++.+..+ +. ..++|||+||++ ++...|..++ ..|.+ +|+|+++|+||||.|+..... . ...+
T Consensus 22 g~~~~l~y~~~------g~-g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~-~-~~~~ 91 (289)
T 1u2e_A 22 GKTLRIHFNDC------GQ-GDETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGWGKSDSVVNS-G-SRSD 91 (289)
T ss_dssp TEEEEEEEEEE------CC-CSSEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTTSTTSCCCCCS-S-CHHH
T ss_pred CcEEEEEEecc------CC-CCceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCCCCCCCCCCcc-c-cCHH
Confidence 7 77777654 21 223999999998 5555666666 67766 499999999999999865431 1 2345
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC-----------HHHHHHHHH--------
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----------LFDLMLELV-------- 180 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~-----------~~~~~~~~~-------- 180 (486)
++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++... ....+....
T Consensus 92 ~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1u2e_A 92 LNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENL 171 (289)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHH
Confidence 555555555555567899999999999999999999998 999999887532 011111000
Q ss_pred -HHHhhhC--C-chhHHHHHHHHH----------HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHH
Q 011425 181 -DVYKIRL--P-KFTVKMAVQYMR----------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLI 246 (486)
Q Consensus 181 -~~~~~~~--p-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l 246 (486)
....... + ............ ..............+....+.++++|+|+|+|++|.++|++.+..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 251 (289)
T 1u2e_A 172 KLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRL 251 (289)
T ss_dssp HHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHH
T ss_pred HHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHH
Confidence 0000000 0 000000000000 0000000000011123356678899999999999999999999999
Q ss_pred HHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 247 FNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 247 ~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
.+.+++ .+++++++ ||+.. .|+++.+.|.+||.+
T Consensus 252 ~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 252 LSGIAG-SELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp HHHSTT-CEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred HhhCCC-cEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 998864 57888886 99865 789999999999853
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-23 Score=222.87 Aligned_cols=236 Identities=11% Similarity=0.048 Sum_probs=176.5
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC--hhhHHHHHHHhccCCeEEEEEcCCC---CCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC--RADANEAAVILLPSNITLFTLDFSG---SGLSDG 109 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~--~~~~~~~~~~L~~~Gy~Vv~~D~rG---~G~S~~ 109 (486)
.+.+.+.+...+|..+.+++|.|.+. .++.|+||++||++.. ...|..++..|+++||.|+++|+|| +|.+..
T Consensus 331 ~~~~~~~~~~~~g~~i~~~~~~p~~~--~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~ 408 (582)
T 3o4h_A 331 AGSRLVWVESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWR 408 (582)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTS--CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHH
T ss_pred CcceEEEEECCCCCEEEEEEEcCCCC--CCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHH
Confidence 35578889999999999999999753 2378999999998766 6677888999999999999999999 554421
Q ss_pred C--CCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhh
Q 011425 110 D--YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIR 186 (486)
Q Consensus 110 ~--~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~ 186 (486)
. ........++|+.++++++.+....++++|+||||||++++.+|..+|+ ++++|+++|..++.........
T Consensus 409 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~----- 483 (582)
T 3o4h_A 409 LKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDA----- 483 (582)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCH-----
T ss_pred hhhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccc-----
Confidence 1 1122223479999999999987544699999999999999999999888 9999999998876543221000
Q ss_pred CCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEeCC-C
Q 011425 187 LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDG-D 262 (486)
Q Consensus 187 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~~g-g 262 (486)
. . ..+....+. .........++...+.++++|+|+++|++|.++|+..+..+++.+.. ..+++++++ |
T Consensus 484 ---~-~---~~~~~~~~~-~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~g 555 (582)
T 3o4h_A 484 ---A-F---RNFIEQLTG-GSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAG 555 (582)
T ss_dssp ---H-H---HHHHHHHTT-TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred ---h-h---HHHHHHHcC-cCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 0 0 001111110 00011112245566778889999999999999999999999988753 578999988 9
Q ss_pred CCCC---ChHHHHHHHHHHHHHhcCC
Q 011425 263 HNSS---RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 263 H~~~---~p~~~~~~I~~FL~~~l~~ 285 (486)
|... .+.++.+.+.+||.++++.
T Consensus 556 H~~~~~~~~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 556 HAINTMEDAVKILLPAVFFLATQRER 581 (582)
T ss_dssp SSCCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHcCC
Confidence 9976 4568899999999998863
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=208.17 Aligned_cols=221 Identities=14% Similarity=0.058 Sum_probs=146.0
Q ss_pred cEEEEEEEecCCCCCCCC-CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC--CCCcch-HHHHH
Q 011425 48 HVLQCSHYMPSPFPEDTP-LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV--SLGWHE-KDDLK 123 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~-~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~--~~~~~~-~~Dl~ 123 (486)
.+|+|..+-| .. .|+|||+||++++...|..++..|++.||+|+++|+||||.|+.... .+.... ++|+.
T Consensus 34 ~~l~y~~~G~------~~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~dl~ 107 (310)
T 1b6g_A 34 LRAHYLDEGN------SDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLL 107 (310)
T ss_dssp CEEEEEEEEC------TTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHH
T ss_pred eEEEEEEeCC------CCCCCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHHHH
Confidence 8898877633 23 68999999999999999999999999899999999999999985331 222211 45555
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC--HH-------------HHHHHHHHHHhhhC
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD--LF-------------DLMLELVDVYKIRL 187 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~--~~-------------~~~~~~~~~~~~~~ 187 (486)
++++.+ +.++++|+||||||.+|+.+|..+|+ |+++|++++... .. .....+..... ..
T Consensus 108 ~ll~~l----~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (310)
T 1b6g_A 108 ALIERL----DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLV-TP 182 (310)
T ss_dssp HHHHHH----TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHH-SC
T ss_pred HHHHHc----CCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHHhc-cC
Confidence 555555 67899999999999999999999998 999999987431 00 00000000000 00
Q ss_pred Cc-------------hhHHHHHHHHH------------HHHhhhhcccc----cccchhhhCC-CCCCCEEEEEeCCCCC
Q 011425 188 PK-------------FTVKMAVQYMR------------RVIQKKAKFDI----MDLNCLKLAP-KTFIPALFGHASEDKF 237 (486)
Q Consensus 188 p~-------------~~~~~~~~~~~------------~~~~~~~~~~~----~~~~~~~~l~-~i~~PvLii~G~~D~~ 237 (486)
+. +.......+.. ........... ...+....+. ++++|+|+|+|++|.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~ 262 (310)
T 1b6g_A 183 SDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKL 262 (310)
T ss_dssp SSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSS
T ss_pred chhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEeccCcch
Confidence 00 00000000000 00000000000 0001234456 8999999999999999
Q ss_pred CCHHHHHHHHHHcCCCcEEEEe--CC-CCCCC-ChHHHHHHHHHHHHH
Q 011425 238 IRARHSDLIFNAYAGDKNIIKF--DG-DHNSS-RPQFYYDSVSIFFYN 281 (486)
Q Consensus 238 vp~~~~~~l~~~l~~~~~l~~~--~g-gH~~~-~p~~~~~~I~~FL~~ 281 (486)
++ ..+..+.+.+++. +++++ ++ ||+.. .|+++.+.|.+||.+
T Consensus 263 ~~-~~~~~~~~~ip~~-~~~~i~~~~~GH~~~~~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 263 LG-PDVMYPMKALING-CPEPLEIADAGHFVQEFGEQVAREALKHFAE 308 (310)
T ss_dssp SS-HHHHHHHHHHSTT-CCCCEEETTCCSCGGGGHHHHHHHHHHHHHH
T ss_pred hh-hHHHHHHHhcccc-cceeeecCCcccchhhChHHHHHHHHHHHhc
Confidence 99 8888888888654 34444 76 99854 789999999999975
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.90 E-value=7e-23 Score=197.58 Aligned_cols=212 Identities=15% Similarity=0.193 Sum_probs=140.4
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-CCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
..++|||+||++++...|..++..|.+. |+|+++|+||||.|+.... ... .+++.+.+..+.+..+.++++|+||
T Consensus 15 ~g~~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~---~~~~~~dl~~~l~~l~~~~~~lvGh 90 (269)
T 2xmz_A 15 TNQVLVFLHGFLSDSRTYHNHIEKFTDN-YHVITIDLPGHGEDQSSMDETWN---FDYITTLLDRILDKYKDKSITLFGY 90 (269)
T ss_dssp CSEEEEEECCTTCCGGGGTTTHHHHHTT-SEEEEECCTTSTTCCCCTTSCCC---HHHHHHHHHHHHGGGTTSEEEEEEE
T ss_pred CCCeEEEEcCCCCcHHHHHHHHHHHhhc-CeEEEecCCCCCCCCCCCCCccC---HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3457999999999999999999888774 9999999999999986543 222 3444444444444446789999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCccCHH---HHHH------HHHHHH---------h--hhCCch------hHHHHH
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF---DLML------ELVDVY---------K--IRLPKF------TVKMAV 196 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~---~~~~------~~~~~~---------~--~~~p~~------~~~~~~ 196 (486)
||||.+|+.+|.++|+ |+++|++++..... .... .+...+ . ...+.+ ......
T Consensus 91 S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (269)
T 2xmz_A 91 SMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQH 170 (269)
T ss_dssp THHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGGGGGGSCHHHHH
T ss_pred CchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCccccccccCCHHHHH
Confidence 9999999999999997 99999998754321 1000 000000 0 000000 000000
Q ss_pred HHHHHHHhh--------hhcc-cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 011425 197 QYMRRVIQK--------KAKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 197 ~~~~~~~~~--------~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~ 266 (486)
.+....... ...+ .....+....+.++++|+|+|+|++|.++++.... +.+.++ +.+++++++ ||+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~-~~~~~~i~~~gH~~~ 248 (269)
T 2xmz_A 171 QIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLIP-NSKCKLISATGHTIH 248 (269)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHST-TEEEEEETTCCSCHH
T ss_pred HHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCC-CcEEEEeCCCCCChh
Confidence 111110000 0000 00111234456788999999999999999887755 777664 578888987 99976
Q ss_pred --ChHHHHHHHHHHHHHh
Q 011425 267 --RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 267 --~p~~~~~~I~~FL~~~ 282 (486)
.|+++.+.|.+||.+.
T Consensus 249 ~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 249 VEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHSHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHh
Confidence 7899999999999864
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-23 Score=190.69 Aligned_cols=187 Identities=16% Similarity=0.162 Sum_probs=150.7
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH--HHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-H--
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE--AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-K-- 119 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~--~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~-- 119 (486)
.+|.+|.+..+.|. .+++.|+||++||++++...|.. ++..|+++||.|+++|+||+|.|........+.. .
T Consensus 14 ~~g~~l~~~~~~p~---~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 90 (210)
T 1imj_A 14 VQGQALFFREALPG---SGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPG 90 (210)
T ss_dssp ETTEEECEEEEECS---SSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCT
T ss_pred eCCeEEEEEEeCCC---CCCCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchhhhcchH
Confidence 48999999999885 33568999999999999999988 5889999999999999999999986653333222 2
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQY 198 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 198 (486)
+++..+++.+ +.++++++|||+||.+++.+|..+|+ ++++|+++|.....
T Consensus 91 ~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------------- 141 (210)
T 1imj_A 91 SFLAAVVDAL----ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK------------------------- 141 (210)
T ss_dssp HHHHHHHHHH----TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG-------------------------
T ss_pred HHHHHHHHHh----CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc-------------------------
Confidence 6666666665 45789999999999999999999987 99999999875410
Q ss_pred HHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHH
Q 011425 199 MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSV 275 (486)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I 275 (486)
.....+..+++|+++++|++|. ++.+.+..+ +.++ +.+++++++ ||... .++.+.+.|
T Consensus 142 ----------------~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~i 202 (210)
T 1imj_A 142 ----------------INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQLP-NHRVLIMKGAGHPCYLDKPEEWHTGL 202 (210)
T ss_dssp ----------------SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSS-SEEEEEETTCCTTHHHHCHHHHHHHH
T ss_pred ----------------ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCC-CCCEEEecCCCcchhhcCHHHHHHHH
Confidence 0112234678999999999999 999988888 6654 568888987 99865 688899999
Q ss_pred HHHHHHh
Q 011425 276 SIFFYNV 282 (486)
Q Consensus 276 ~~FL~~~ 282 (486)
.+||++.
T Consensus 203 ~~fl~~~ 209 (210)
T 1imj_A 203 LDFLQGL 209 (210)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 9999753
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-23 Score=193.59 Aligned_cols=215 Identities=16% Similarity=0.158 Sum_probs=141.3
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhS 144 (486)
.|+|||+||++++...|..++..|.++||.|+++|+||||.|+...... +...+.+.++.+.+... +. ++++|+|||
T Consensus 4 g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~l~~~l~~l-~~~~~~~lvGhS 81 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAV-ETVDEYSKPLIETLKSL-PENEEVILVGFS 81 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGC-CSHHHHHHHHHHHHHTS-CTTCCEEEEEET
T ss_pred CCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCcc-ccHHHhHHHHHHHHHHh-cccCceEEEEeC
Confidence 3899999999999999999999999999999999999999998654321 11123333333333333 55 899999999
Q ss_pred chHHHHHHHHhcCCC-ccEEEEcCCccCHH-----HHHHHHHHHHhhhCC----------------chhHHH--------
Q 011425 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLELVDVYKIRLP----------------KFTVKM-------- 194 (486)
Q Consensus 145 mGG~lAl~~A~~~p~-v~~lVl~sp~~~~~-----~~~~~~~~~~~~~~p----------------~~~~~~-------- 194 (486)
|||.+++.+|..+|+ |+++|+++++.... ............... .+....
T Consensus 82 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (258)
T 3dqz_A 82 FGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQN 161 (258)
T ss_dssp THHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTT
T ss_pred hhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHHhhcc
Confidence 999999999999997 99999998854311 111111100000000 000000
Q ss_pred ----HHHHHHHHHhhhhccc--ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-
Q 011425 195 ----AVQYMRRVIQKKAKFD--IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS- 266 (486)
Q Consensus 195 ----~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~- 266 (486)
..............+. .............++|+++|+|++|.++|++.+..+.+.+++. +++++++ ||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ 240 (258)
T 3dqz_A 162 CPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVS-KVYEIDGGDHMVML 240 (258)
T ss_dssp SCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCCS-CEEEETTCCSCHHH
T ss_pred CCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCcc-cEEEcCCCCCchhh
Confidence 0011111000000000 0000111122223689999999999999999999999998654 6888885 99966
Q ss_pred -ChHHHHHHHHHHHHHhc
Q 011425 267 -RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 267 -~p~~~~~~I~~FL~~~l 283 (486)
.|+++.+.|.+|+++++
T Consensus 241 ~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 241 SKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HSHHHHHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHHHHHhC
Confidence 89999999999998764
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-23 Score=199.78 Aligned_cols=226 Identities=15% Similarity=0.095 Sum_probs=149.6
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KD 120 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~ 120 (486)
+...+|..+.+..+ +..|+|||+||++++...|..++..|.+. |.|+++|+||||.|........+.. ++
T Consensus 14 ~~~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 84 (301)
T 3kda_A 14 YREVDGVKLHYVKG--------GQGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPKTGYSGEQVAV 84 (301)
T ss_dssp EEEETTEEEEEEEE--------ESSSEEEEECCTTCCGGGGTTTHHHHTTT-SEEEEECCTTSTTCCCCSSCSSHHHHHH
T ss_pred EEeeCCeEEEEEEc--------CCCCEEEEECCCCcchhHHHHHHHHHHhc-CeEEEEcCCCCCCCCCCCCCccHHHHHH
Confidence 34458999998776 25689999999999999999999999987 9999999999999987643333222 45
Q ss_pred HHHHHHHHHHhcCCCCc-EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC---------------------------
Q 011425 121 DLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD--------------------------- 171 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~-i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~--------------------------- 171 (486)
|+.++++.+ +.++ ++|+||||||.+++.+|..+|+ |+++|++++...
T Consensus 85 ~l~~~l~~l----~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (301)
T 3kda_A 85 YLHKLARQF----SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAAD 160 (301)
T ss_dssp HHHHHHHHH----CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCS
T ss_pred HHHHHHHHc----CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcC
Confidence 555555554 5666 9999999999999999999998 999999998521
Q ss_pred --HHHHH---------HHHHHHHhhhCCchhHHHHHHHHHHHHhhh------hcccc------cccchhhhCCCCCCCEE
Q 011425 172 --LFDLM---------LELVDVYKIRLPKFTVKMAVQYMRRVIQKK------AKFDI------MDLNCLKLAPKTFIPAL 228 (486)
Q Consensus 172 --~~~~~---------~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~~l~~i~~PvL 228 (486)
....+ ..+..................+........ ..+.. ........+.++++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 240 (301)
T 3kda_A 161 DRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTL 240 (301)
T ss_dssp TTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEE
T ss_pred cchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCcceE
Confidence 01000 000000000000001111111111000000 00000 00011223348899999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 229 FGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 229 ii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
+|+|++| +++.....+.+.++ +.+++++++ ||+.+ .|+++.+.|.+|+.+.-
T Consensus 241 ~i~G~~D--~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~ 295 (301)
T 3kda_A 241 AGGGAGG--MGTFQLEQMKAYAE-DVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGR 295 (301)
T ss_dssp EECSTTS--CTTHHHHHHHTTBS-SEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSC
T ss_pred EEecCCC--CChhHHHHHHhhcc-cCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCc
Confidence 9999999 66777777776664 468888987 99977 89999999999998753
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.2e-23 Score=195.77 Aligned_cols=212 Identities=11% Similarity=0.039 Sum_probs=143.8
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
...+.|+|||+||++++...|..++..|.+. |.|+++|+||+|.|........ .+++.+.+..+.+..+..+++|+
T Consensus 16 ~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~lv 91 (267)
T 3fla_A 16 APDARARLVCLPHAGGSASFFFPLAKALAPA-VEVLAVQYPGRQDRRHEPPVDS---IGGLTNRLLEVLRPFGDRPLALF 91 (267)
T ss_dssp CTTCSEEEEEECCTTCCGGGGHHHHHHHTTT-EEEEEECCTTSGGGTTSCCCCS---HHHHHHHHHHHTGGGTTSCEEEE
T ss_pred CCCCCceEEEeCCCCCCchhHHHHHHHhccC-cEEEEecCCCCCCCCCCCCCcC---HHHHHHHHHHHHHhcCCCceEEE
Confidence 4467899999999999999999999999775 9999999999999986544333 34444444333333366899999
Q ss_pred EEcchHHHHHHHHhcCCC-----ccEEEEcCCccC------------HHHHHHHHHHHHhhhCC-----chhHHHHHHHH
Q 011425 142 GRSMGAVTSLLYGAEDPS-----IAGMVLDSAFSD------------LFDLMLELVDVYKIRLP-----KFTVKMAVQYM 199 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~-----v~~lVl~sp~~~------------~~~~~~~~~~~~~~~~p-----~~~~~~~~~~~ 199 (486)
||||||.+++.+|..+|+ +.++|++++... .......+.. +..... ..........+
T Consensus 92 G~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 170 (267)
T 3fla_A 92 GHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRK-LGGSDAAMLADPELLAMVLPAI 170 (267)
T ss_dssp EETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHH-TCHHHHHHHHSHHHHHHHHHHH
T ss_pred EeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHH-hcCcchhhccCHHHHHHHHHHH
Confidence 999999999999999997 899999886532 1111111111 000000 00000111111
Q ss_pred HHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHH
Q 011425 200 RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSI 277 (486)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~ 277 (486)
...+.....+.. . ....+++|+|+++|++|.+++++.+..+.+.++...+++++++||+.. .++++.+.|.+
T Consensus 171 ~~~~~~~~~~~~-----~-~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~i~~ 244 (267)
T 3fla_A 171 RSDYRAVETYRH-----E-PGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPGGHFFLVDQAAPMIATMTE 244 (267)
T ss_dssp HHHHHHHHHCCC-----C-TTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESSSTTHHHHTHHHHHHHHHH
T ss_pred HHHHHhhhcccc-----c-ccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecCCceeeccCHHHHHHHHHH
Confidence 111111111111 1 115789999999999999999999999998887778899999999866 78899999999
Q ss_pred HHHHhcC
Q 011425 278 FFYNVLH 284 (486)
Q Consensus 278 FL~~~l~ 284 (486)
||.+...
T Consensus 245 fl~~~~~ 251 (267)
T 3fla_A 245 KLAGPAL 251 (267)
T ss_dssp HTC----
T ss_pred Hhccccc
Confidence 9987654
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=205.34 Aligned_cols=228 Identities=13% Similarity=0.144 Sum_probs=150.0
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+|..|.|..+ +.++.|+|||+||++++...|..++..|.+. |+|+++|+||||.|+.....+. .+++.+
T Consensus 14 ~~g~~l~y~~~------G~g~~~pvvllHG~~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~---~~~~a~ 83 (316)
T 3afi_E 14 VLGSSMAYRET------GAQDAPVVLFLHGNPTSSHIWRNILPLVSPV-AHCIAPDLIGFGQSGKPDIAYR---FFDHVR 83 (316)
T ss_dssp ETTEEEEEEEE------SCTTSCEEEEECCTTCCGGGGTTTHHHHTTT-SEEEEECCTTSTTSCCCSSCCC---HHHHHH
T ss_pred eCCEEEEEEEe------CCCCCCeEEEECCCCCchHHHHHHHHHHhhC-CEEEEECCCCCCCCCCCCCCCC---HHHHHH
Confidence 47888888765 2233459999999999999999999888774 9999999999999975432222 344444
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC---H---H-----------HHHHHHHHHHhh-
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD---L---F-----------DLMLELVDVYKI- 185 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~---~---~-----------~~~~~~~~~~~~- 185 (486)
.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++... . . .........+..
T Consensus 84 dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (316)
T 3afi_E 84 YLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTP 163 (316)
T ss_dssp HHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCC
Confidence 44444444477899999999999999999999998 999999886321 0 0 011111110000
Q ss_pred ----------------hCC-----chhHHHHHHHHHH---------HHhhhhccccc---------ccchhhhCCCCCCC
Q 011425 186 ----------------RLP-----KFTVKMAVQYMRR---------VIQKKAKFDIM---------DLNCLKLAPKTFIP 226 (486)
Q Consensus 186 ----------------~~p-----~~~~~~~~~~~~~---------~~~~~~~~~~~---------~~~~~~~l~~i~~P 226 (486)
..+ .........+... ........... ..+....+.++++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 243 (316)
T 3afi_E 164 GEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYP 243 (316)
T ss_dssp THHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSC
T ss_pred chhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhccCCC
Confidence 000 0000000111000 00000000000 00011234468999
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 227 vLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
+|+|+|++|.++|++.++.+.+.+++ .+++++++ ||+.. .|+++.+.|.+||.+..
T Consensus 244 ~Lvi~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~ 302 (316)
T 3afi_E 244 KLLFTGEPGALVSPEFAERFAASLTR-CALIRLGAGLHYLQEDHADAIGRSVAGWIAGIE 302 (316)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHSSS-EEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCccCHHHHHHHHHhCCC-CeEEEcCCCCCCchhhCHHHHHHHHHHHHhhcC
Confidence 99999999999999999999998865 57777876 99976 78999999999998764
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-23 Score=186.87 Aligned_cols=171 Identities=15% Similarity=0.099 Sum_probs=139.8
Q ss_pred CCCcEEEEeCCCCCChhhHH--HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADAN--EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~--~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
.++|+||++||++++...|. .++..|.++||.|+++|+||+|.|.+...... ..+++.++++++....+..+++++
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 79 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGD--VRGRLQRLLEIARAATEKGPVVLA 79 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCC--HHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHhcCCCCCEEEE
Confidence 45789999999999877554 78889999999999999999999875432222 256677788888777556899999
Q ss_pred EEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCC
Q 011425 142 GRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP 221 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (486)
||||||.+++.++..+| ++++|+++|+..... .+ .+.
T Consensus 80 G~S~Gg~~a~~~a~~~~-~~~~v~~~~~~~~~~------------~~------------------------------~~~ 116 (176)
T 2qjw_A 80 GSSLGSYIAAQVSLQVP-TRALFLMVPPTKMGP------------LP------------------------------ALD 116 (176)
T ss_dssp EETHHHHHHHHHHTTSC-CSEEEEESCCSCBTT------------BC------------------------------CCC
T ss_pred EECHHHHHHHHHHHhcC-hhheEEECCcCCccc------------cC------------------------------ccc
Confidence 99999999999999999 999999998875310 00 055
Q ss_pred CCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC-ChHHHHHHHHHHHHH
Q 011425 222 KTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS-RPQFYYDSVSIFFYN 281 (486)
Q Consensus 222 ~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~-~p~~~~~~I~~FL~~ 281 (486)
.+++|+|+++|++|.++|++.+..+++.+ +.+++++++||... .++++.+.+.+||++
T Consensus 117 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 117 AAAVPISIVHAWHDELIPAADVIAWAQAR--SARLLLVDDGHRLGAHVQAASRAFAELLQS 175 (176)
T ss_dssp CCSSCEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTCTTCHHHHHHHHHHHHHT
T ss_pred ccCCCEEEEEcCCCCccCHHHHHHHHHhC--CceEEEeCCCccccccHHHHHHHHHHHHHh
Confidence 78899999999999999999999999888 45677776699876 678899999999875
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.3e-23 Score=198.49 Aligned_cols=215 Identities=13% Similarity=0.143 Sum_probs=140.6
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC-CCcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
.|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+..... ..+...+++.+.+..+.+..+.++++|+|||
T Consensus 20 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS 98 (271)
T 1wom_A 20 KASIMFAPGFGCDQSVWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHS 98 (271)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCcEEEEcCCCCchhhHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCCCCeEEEEeC
Confidence 48999999999999999988888876 699999999999999754311 1111233333333333333367899999999
Q ss_pred chHHHHHHHHhcCCC-ccEEEEcCCccCH------------HHHHHHHHHHHh-----------h-hC-CchhHHHHHHH
Q 011425 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDL------------FDLMLELVDVYK-----------I-RL-PKFTVKMAVQY 198 (486)
Q Consensus 145 mGG~lAl~~A~~~p~-v~~lVl~sp~~~~------------~~~~~~~~~~~~-----------~-~~-p~~~~~~~~~~ 198 (486)
|||.+++.+|..+|+ |+++|++++.... ............ . .. ..........+
T Consensus 99 ~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (271)
T 1wom_A 99 VGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEEL 178 (271)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTCHHHHHHH
T ss_pred HHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 999999999999998 9999999864210 000001000000 0 00 00000000011
Q ss_pred HHHHHhhhh------cccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChH
Q 011425 199 MRRVIQKKA------KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQ 269 (486)
Q Consensus 199 ~~~~~~~~~------~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~ 269 (486)
......... .......+....+.++++|+|+|+|++|.++|++.++.+.+.+++ .+++++++ ||+.. .|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~ 257 (271)
T 1wom_A 179 ESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPY-SSLKQMEARGHCPHMSHPD 257 (271)
T ss_dssp HHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSSS-EEEEEEEEESSCHHHHCHH
T ss_pred HHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCCC-CEEEEeCCCCcCccccCHH
Confidence 100000000 000011233445678999999999999999999999999888865 67888886 99866 799
Q ss_pred HHHHHHHHHHHHh
Q 011425 270 FYYDSVSIFFYNV 282 (486)
Q Consensus 270 ~~~~~I~~FL~~~ 282 (486)
++.+.|.+||.++
T Consensus 258 ~~~~~i~~fl~~~ 270 (271)
T 1wom_A 258 ETIQLIGDYLKAH 270 (271)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999875
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-23 Score=198.15 Aligned_cols=216 Identities=13% Similarity=0.094 Sum_probs=145.8
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC-CcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-GWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~-~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
.|+|||+||++++...|..++..|.+ ||.|+++|+||||.|....... .+...+++.+.+..+.+..+.++++|+|||
T Consensus 28 ~~~vv~lHG~~~~~~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S 106 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHS 106 (282)
T ss_dssp SCEEEEECCTTCCGGGGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTCCSEEEEEET
T ss_pred CCeEEEECCCCCCcchHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEEec
Confidence 48999999999999999999999988 9999999999999998654221 222344444444444444467899999999
Q ss_pred chHHHHHHHHhcCCC-ccEEEEcCCccCHH------------HHHHHHHHHHhhh-------------CCchhHHHHHHH
Q 011425 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------------DLMLELVDVYKIR-------------LPKFTVKMAVQY 198 (486)
Q Consensus 145 mGG~lAl~~A~~~p~-v~~lVl~sp~~~~~------------~~~~~~~~~~~~~-------------~p~~~~~~~~~~ 198 (486)
|||.+++.+|..+|+ |+++|+++|..... ............. ...........+
T Consensus 107 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (282)
T 3qvm_A 107 VSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGEL 186 (282)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred ccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCccchhhHHHH
Confidence 999999999999987 99999999864210 0011110000000 000000000000
Q ss_pred HHHHHhh------hhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChH
Q 011425 199 MRRVIQK------KAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQ 269 (486)
Q Consensus 199 ~~~~~~~------~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~ 269 (486)
....... .........+....+.++++|+|+++|++|.+++++.+..+.+.+++ .+++++++ ||... .++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~ 265 (282)
T 3qvm_A 187 SGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPN-SQLELIQAEGHCLHMTDAG 265 (282)
T ss_dssp HHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSSS-EEEEEEEEESSCHHHHCHH
T ss_pred HHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCC-CcEEEecCCCCcccccCHH
Confidence 0000000 00000111233456678899999999999999999999999998864 57888886 99966 789
Q ss_pred HHHHHHHHHHHHhc
Q 011425 270 FYYDSVSIFFYNVL 283 (486)
Q Consensus 270 ~~~~~I~~FL~~~l 283 (486)
++.+.|.+||.+..
T Consensus 266 ~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 266 LITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999998764
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-23 Score=197.57 Aligned_cols=210 Identities=16% Similarity=0.205 Sum_probs=140.3
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
..|+|||+||++++...|..++..|.+. |+|+++|+||||.|+... ...+.. ++|+.++++.+ +.++++|+||
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~-~~~~~~~a~dl~~~l~~l----~~~~~~lvGh 88 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLDNLGVLARDLVND-HNIIQVDVRNHGLSPREP-VMNYPAMAQDLVDTLDAL----QIDKATFIGH 88 (255)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHTTT-SCEEEECCTTSTTSCCCS-CCCHHHHHHHHHHHHHHH----TCSCEEEEEE
T ss_pred CCCCEEEEcCCcccHhHHHHHHHHHHhh-CcEEEecCCCCCCCCCCC-CcCHHHHHHHHHHHHHHc----CCCCeeEEee
Confidence 5688999999999999999999999875 999999999999998643 233322 45555555554 5689999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCcc--C----HHHHHHHHHHHHhhhCCch-----------hHHHHHHHHHHHHhh
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFS--D----LFDLMLELVDVYKIRLPKF-----------TVKMAVQYMRRVIQK 205 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~--~----~~~~~~~~~~~~~~~~p~~-----------~~~~~~~~~~~~~~~ 205 (486)
||||.+++.+|..+|+ |+++|++++.. . .......+........... .......++...+..
T Consensus 89 S~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (255)
T 3bf7_A 89 SMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVD 168 (255)
T ss_dssp THHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHHHHHTTEET
T ss_pred CccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHHHHHHhccC
Confidence 9999999999999998 99999976421 1 1111111111000000000 000000111000000
Q ss_pred hhccccc------ccc---hhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHH
Q 011425 206 KAKFDIM------DLN---CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYD 273 (486)
Q Consensus 206 ~~~~~~~------~~~---~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~ 273 (486)
..+... ... ....+.++++|+|+|+|++|.+++++.++.+.+.+++ .+++++++ ||+.. .|+.+.+
T Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~ 246 (255)
T 3bf7_A 169 -GEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQ-ARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_dssp -TEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCTT-EEECCBTTCCSCHHHHCHHHHHH
T ss_pred -CceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCCC-CeEEEeCCCCCccccCCHHHHHH
Confidence 000000 000 0023568899999999999999999988888888754 67888887 99866 7999999
Q ss_pred HHHHHHHHh
Q 011425 274 SVSIFFYNV 282 (486)
Q Consensus 274 ~I~~FL~~~ 282 (486)
.|.+||.++
T Consensus 247 ~i~~fl~~~ 255 (255)
T 3bf7_A 247 AIRRYLNDH 255 (255)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999999753
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-23 Score=202.31 Aligned_cols=185 Identities=16% Similarity=0.246 Sum_probs=156.3
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+|.. .+.+|+|.. ..+.|+|||+||++++...|..++..|+++||.|+++|+||+|.+.. ...+|+.+
T Consensus 79 ~~g~~-~~~~~~p~~---~~~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~-------~~~~d~~~ 147 (306)
T 3vis_A 79 ADGFG-GGTIYYPRE---NNTYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPD-------SRARQLNA 147 (306)
T ss_dssp CSSSC-CEEEEEESS---CSCEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHH-------HHHHHHHH
T ss_pred cCCCc-ceEEEeeCC---CCCCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcc-------hHHHHHHH
Confidence 55654 345677763 23689999999999999999999999999999999999999998853 22578889
Q ss_pred HHHHHHhc------CC--CCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHH
Q 011425 125 VVSYLRGN------KQ--TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAV 196 (486)
Q Consensus 125 ~i~~l~~~------~~--~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 196 (486)
+++++... .. ..+++|+||||||.+++.++..+|+++++|+++|+..
T Consensus 148 ~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~v~~~v~~~~~~~------------------------- 202 (306)
T 3vis_A 148 ALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPDLKAAIPLTPWHL------------------------- 202 (306)
T ss_dssp HHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCCS-------------------------
T ss_pred HHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCCeeEEEEeccccC-------------------------
Confidence 99999886 22 3699999999999999999999999999999998654
Q ss_pred HHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHH-HHHHHHHHcCC--CcEEEEeCC-CCCCC--ChHH
Q 011425 197 QYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAYAG--DKNIIKFDG-DHNSS--RPQF 270 (486)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~l~~--~~~l~~~~g-gH~~~--~p~~ 270 (486)
...+..+++|+|+++|++|.+++++ .+..+++.++. .++++++++ ||... .+++
T Consensus 203 --------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~ 262 (306)
T 3vis_A 203 --------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKT 262 (306)
T ss_dssp --------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHH
T ss_pred --------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhH
Confidence 1345577899999999999999998 69999999876 778999998 99876 5789
Q ss_pred HHHHHHHHHHHhcCC
Q 011425 271 YYDSVSIFFYNVLHP 285 (486)
Q Consensus 271 ~~~~I~~FL~~~l~~ 285 (486)
+.+.+.+||.+++..
T Consensus 263 ~~~~i~~fl~~~l~~ 277 (306)
T 3vis_A 263 IGMYSVAWLKRFVDE 277 (306)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHccC
Confidence 999999999999864
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-22 Score=193.56 Aligned_cols=221 Identities=14% Similarity=0.159 Sum_probs=157.4
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCC---CCCCCCcEEEEeCC---CCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPF---PEDTPLPCVVYCHG---NSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~---~~~~~~p~VV~lHG---~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
.+.+.+ ..+|..+.+.+|.|... ...++.|+||++|| .+++...|..++..|+++||.|+++|+||+|.++.
T Consensus 4 ~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~- 81 (277)
T 3bxp_A 4 VEQRTL-NTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS- 81 (277)
T ss_dssp EEEEEE-CSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC-
T ss_pred eEEEEe-ccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc-
Confidence 356666 46788899999999721 23467899999999 56777788889999999999999999999995443
Q ss_pred CCCCCcchHHHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhcC--------------C-CccEEEEcCCcc
Q 011425 111 YVSLGWHEKDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAED--------------P-SIAGMVLDSAFS 170 (486)
Q Consensus 111 ~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~~--------------p-~v~~lVl~sp~~ 170 (486)
... ..++|+.++++++.+.. +..+|+|+||||||.+++.+|... + .++++|+++|..
T Consensus 82 --~~~-~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~ 158 (277)
T 3bxp_A 82 --VYP-WALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVI 158 (277)
T ss_dssp --CTT-HHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCC
T ss_pred --cCc-hHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcc
Confidence 111 33788999999998752 236899999999999999999884 3 399999999987
Q ss_pred CHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 171 DLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 171 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
+.... .... .... ...+. .....++...+..+.+|+|+++|++|.++|++.+..+++.+
T Consensus 159 ~~~~~-----------~~~~--~~~~---~~~~~-----~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l 217 (277)
T 3bxp_A 159 DLTAG-----------FPTT--SAAR---NQITT-----DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAM 217 (277)
T ss_dssp BTTSS-----------SSSS--HHHH---HHHCS-----CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHH
T ss_pred cCCCC-----------CCCc--cccc---hhccc-----hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHH
Confidence 52210 0000 0000 01110 11223445566778899999999999999999999888876
Q ss_pred C---CCcEEEEeCC-CCCCC--C---------------hHHHHHHHHHHHHHhc
Q 011425 251 A---GDKNIIKFDG-DHNSS--R---------------PQFYYDSVSIFFYNVL 283 (486)
Q Consensus 251 ~---~~~~l~~~~g-gH~~~--~---------------p~~~~~~I~~FL~~~l 283 (486)
. ..++++++++ +|... . .+++.+.+.+||.++.
T Consensus 218 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 218 LQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 4 3568899998 99543 2 3677888999998763
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=201.58 Aligned_cols=229 Identities=15% Similarity=0.104 Sum_probs=149.3
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC-CCcchHHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-~~~~~~~Dl 122 (486)
..+|.+|.+..+ ++.|+|||+||++++...|..++..|.+ +|.|+++|+||||.|...... ......+++
T Consensus 14 ~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (297)
T 2qvb_A 14 EIAGKRMAYIDE--------GKGDAIVFQHGNPTSSYLWRNIMPHLEG-LGRLVACDLIGMGASDKLSPSGPDRYSYGEQ 84 (297)
T ss_dssp EETTEEEEEEEE--------SSSSEEEEECCTTCCGGGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSCSTTSSCHHHH
T ss_pred EECCEEEEEEec--------CCCCeEEEECCCCchHHHHHHHHHHHhh-cCeEEEEcCCCCCCCCCCCCccccCcCHHHH
Confidence 357888888776 2368999999999999999888888877 599999999999999865432 000112333
Q ss_pred HHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH------HHHHHHHHHHHhhh--------
Q 011425 123 KVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL------FDLMLELVDVYKIR-------- 186 (486)
Q Consensus 123 ~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~------~~~~~~~~~~~~~~-------- 186 (486)
.+.+..+.+..+. ++++|+||||||.+++.+|..+|+ |+++|++++.... ..........+...
T Consensus 85 ~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (297)
T 2qvb_A 85 RDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALE 164 (297)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHHHHT
T ss_pred HHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhhhcc
Confidence 3333333333366 899999999999999999999997 9999999886531 00000000000000
Q ss_pred -------------CCchhHHHHHHHHHHH----------Hhhhhccc---------ccccchhhhCCCCCCCEEEEEeCC
Q 011425 187 -------------LPKFTVKMAVQYMRRV----------IQKKAKFD---------IMDLNCLKLAPKTFIPALFGHASE 234 (486)
Q Consensus 187 -------------~p~~~~~~~~~~~~~~----------~~~~~~~~---------~~~~~~~~~l~~i~~PvLii~G~~ 234 (486)
...........+.... ........ ....+....+.++++|+|+|+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 244 (297)
T 2qvb_A 165 HNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEP 244 (297)
T ss_dssp TCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEE
T ss_pred ccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEEecCC
Confidence 0000000000000000 00000000 001122344567889999999999
Q ss_pred CCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHHHhc
Q 011425 235 DKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 235 D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~~~l 283 (486)
|.+++++.++.+.+.++. +++++++||+.. .++++.+.|.+||++..
T Consensus 245 D~~~~~~~~~~~~~~~~~--~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 245 GAIITGRIRDYVRSWPNQ--TEITVPGVHFVQEDSPEEIGAAIAQFVRRLR 293 (297)
T ss_dssp CSSSCHHHHHHHHTSSSE--EEEEEEESSCGGGTCHHHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCC--eEEEecCccchhhhCHHHHHHHHHHHHHHHh
Confidence 999999999999888866 677674499866 78999999999998763
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=199.81 Aligned_cols=228 Identities=11% Similarity=0.114 Sum_probs=151.7
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+|.+|.+..+. ....|+|||+||++++...|..++..|++ ||.|+++|+||||.|........ .+++.+
T Consensus 17 ~~g~~l~~~~~g------~~~~~~vl~lHG~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~---~~~~~~ 86 (299)
T 3g9x_A 17 VLGERMHYVDVG------PRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDLDYF---FDDHVR 86 (299)
T ss_dssp ETTEEEEEEEES------CSSSCCEEEECCTTCCGGGGTTTHHHHTT-TSCEEEECCTTSTTSCCCCCCCC---HHHHHH
T ss_pred eCCeEEEEEecC------CCCCCEEEEECCCCccHHHHHHHHHHHcc-CCEEEeeCCCCCCCCCCCCCccc---HHHHHH
Confidence 488899987772 23468999999999999999998888865 89999999999999987654333 344444
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH------HHHHHHHHHHhhh-----------
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVDVYKIR----------- 186 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~------~~~~~~~~~~~~~----------- 186 (486)
.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++..... .........+...
T Consensus 87 ~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (299)
T 3g9x_A 87 YLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQN 166 (299)
T ss_dssp HHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHHHHHHTTSC
T ss_pred HHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcchhhhccch
Confidence 44444444467899999999999999999999997 99999988433211 0000000000000
Q ss_pred -----------CCchhHHHHHHHHHHH---------Hhhhhcccc---------cccchhhhCCCCCCCEEEEEeCCCCC
Q 011425 187 -----------LPKFTVKMAVQYMRRV---------IQKKAKFDI---------MDLNCLKLAPKTFIPALFGHASEDKF 237 (486)
Q Consensus 187 -----------~p~~~~~~~~~~~~~~---------~~~~~~~~~---------~~~~~~~~l~~i~~PvLii~G~~D~~ 237 (486)
...+.......+.... ......... ...+....+.++++|+|+|+|++|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~ 246 (299)
T 3g9x_A 167 AFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVL 246 (299)
T ss_dssp HHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSS
T ss_pred hhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEEecCCCCC
Confidence 0000000000000000 000000000 00012233567889999999999999
Q ss_pred CCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 238 IRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 238 vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
++++.+..+.+.+++ .+++++++ ||+.. .|+++.+.|.+|+.+.-
T Consensus 247 ~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~ 294 (299)
T 3g9x_A 247 IPPAEAARLAESLPN-CKTVDIGPGLHYLQEDNPDLIGSEIARWLPALH 294 (299)
T ss_dssp SCHHHHHHHHHHSTT-EEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGC
T ss_pred CCHHHHHHHHhhCCC-CeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhh
Confidence 999999999998854 67888886 99976 79999999999887654
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.1e-22 Score=203.50 Aligned_cols=237 Identities=15% Similarity=0.112 Sum_probs=163.4
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh-hHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~-~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
..+.+.+.. +|..|.+++|.|.+ .++.|+||++||++++.. .+..++..|+.+||.|+++|+||+|.|.+.....
T Consensus 167 ~~~~v~i~~-~g~~l~~~~~~P~~---~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~ 242 (415)
T 3mve_A 167 IIKQLEIPF-EKGKITAHLHLTNT---DKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTE 242 (415)
T ss_dssp EEEEEEEEC-SSSEEEEEEEESCS---SSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCS
T ss_pred CeEEEEEEE-CCEEEEEEEEecCC---CCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCC
Confidence 346677765 88899999999963 467899999999999855 4555678888899999999999999998654433
Q ss_pred CcchHHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchh
Q 011425 115 GWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~ 191 (486)
.+ ...+..+++++..... ..+|+|+||||||++++.+|..+|. |+++|+++|+........... ...+...
T Consensus 243 ~~--~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~----~~~~~~~ 316 (415)
T 3mve_A 243 DY--SRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKL----QQMPKMY 316 (415)
T ss_dssp CT--THHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHH----TTSCHHH
T ss_pred CH--HHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHH----HHhHHHH
Confidence 33 2445778888887753 3789999999999999999998885 999999999865322111110 1111111
Q ss_pred HHHHHHHHH-------HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCC
Q 011425 192 VKMAVQYMR-------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHN 264 (486)
Q Consensus 192 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~ 264 (486)
...+...+. ........+......... +.++++|+|+++|++|.++|++.+..+.+.. ...+++++++++.
T Consensus 317 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~-~~~~l~~i~g~~~ 394 (415)
T 3mve_A 317 LDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLS-SRKTKVPILAMSLEGDPVSPYSDNQMVAFFS-TYGKAKKISSKTI 394 (415)
T ss_dssp HHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTT-SSCBSSCEEEEEETTCSSSCHHHHHHHHHTB-TTCEEEEECCCSH
T ss_pred HHHHHHHhCCCccCHHHHHHHHhhcCcccccccc-cCCCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCceEEEecCCCc
Confidence 111000000 000001111111100111 4688999999999999999999999988854 5578888988433
Q ss_pred CCChHHHHHHHHHHHHHhcC
Q 011425 265 SSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 265 ~~~p~~~~~~I~~FL~~~l~ 284 (486)
....+++.+.+.+||.+++.
T Consensus 395 h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 395 TQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHHHhc
Confidence 33677889999999998764
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-22 Score=189.66 Aligned_cols=225 Identities=10% Similarity=-0.022 Sum_probs=144.4
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+|.++.+..+ +....|+|||+||++++...|..++..|.+ +|.|+++|+||||.|+.......+ +++.+
T Consensus 6 ~~g~~l~~~~~------g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~~~~~---~~~~~ 75 (264)
T 3ibt_A 6 VNGTLMTYSES------GDPHAPTLFLLSGWCQDHRLFKNLAPLLAR-DFHVICPDWRGHDAKQTDSGDFDS---QTLAQ 75 (264)
T ss_dssp ETTEECCEEEE------SCSSSCEEEEECCTTCCGGGGTTHHHHHTT-TSEEEEECCTTCSTTCCCCSCCCH---HHHHH
T ss_pred eCCeEEEEEEe------CCCCCCeEEEEcCCCCcHhHHHHHHHHHHh-cCcEEEEccccCCCCCCCccccCH---HHHHH
Confidence 37888887766 223578999999999999999999998876 599999999999999876433332 33333
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCHHHHHHHHHHHHhhhC--------------C
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDLFDLMLELVDVYKIRL--------------P 188 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~--------------p 188 (486)
.+..+.+..+.++++|+||||||.+++.+|..+ |+ |+++|++++................... .
T Consensus 76 ~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
T 3ibt_A 76 DLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAE 155 (264)
T ss_dssp HHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHHHHHHHhcc
Confidence 333333333668999999999999999999999 87 9999999876521111111111000000 0
Q ss_pred chhHHHHHHHHHHHHhh------------hhcccccccchhhhCCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHcCCCc
Q 011425 189 KFTVKMAVQYMRRVIQK------------KAKFDIMDLNCLKLAPKTFIPALFGHASED--KFIRARHSDLIFNAYAGDK 254 (486)
Q Consensus 189 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~i~~PvLii~G~~D--~~vp~~~~~~l~~~l~~~~ 254 (486)
..........+...+.. .........+....+.++++|+|+++|..| ..+++.....+.+.+++ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~-~ 234 (264)
T 3ibt_A 156 TTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSW-F 234 (264)
T ss_dssp TCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHCTT-E
T ss_pred cCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhCCC-c
Confidence 00000000000000000 000000001223566789999999976444 44446667777777754 6
Q ss_pred EEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 255 NIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 255 ~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
+++++++ ||+.. .|+++.+.|.+||+
T Consensus 235 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 235 HPRHIPGRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp EEEECCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred eEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 7888987 99866 79999999999985
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.9e-23 Score=215.35 Aligned_cols=236 Identities=13% Similarity=0.102 Sum_probs=160.0
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc-
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW- 116 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~- 116 (486)
+...+...||.+|.+..+ +..|+|||+||++++...|..++..|.++||.|+++|+||||.|........+
T Consensus 238 ~~~~~~~~dg~~l~~~~~--------g~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~ 309 (555)
T 3i28_A 238 SHGYVTVKPRVRLHFVEL--------GSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYC 309 (555)
T ss_dssp EEEEEEEETTEEEEEEEE--------CSSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGS
T ss_pred ceeEEEeCCCcEEEEEEc--------CCCCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCccccc
Confidence 344566679999998776 35689999999999999999999999999999999999999999865432222
Q ss_pred -ch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH-------HHHHH---HHHHH
Q 011425 117 -HE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-------DLMLE---LVDVY 183 (486)
Q Consensus 117 -~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~-------~~~~~---~~~~~ 183 (486)
.. ++|+.++++.+ +.++++|+||||||.+++.+|..+|+ |+++|+++++.... ..... .....
T Consensus 310 ~~~~~~d~~~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (555)
T 3i28_A 310 MEVLCKEMVTFLDKL----GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQL 385 (555)
T ss_dssp HHHHHHHHHHHHHHH----TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHH
T ss_pred HHHHHHHHHHHHHHc----CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhH
Confidence 11 44555555554 56899999999999999999999997 99999988754210 00000 00000
Q ss_pred hhhCCchh--------------------------------------------------HHHHHHHHHHHHhhhh-----c
Q 011425 184 KIRLPKFT--------------------------------------------------VKMAVQYMRRVIQKKA-----K 208 (486)
Q Consensus 184 ~~~~p~~~--------------------------------------------------~~~~~~~~~~~~~~~~-----~ 208 (486)
....+... ......+......... .
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (555)
T 3i28_A 386 YFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNW 465 (555)
T ss_dssp HHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHT
T ss_pred HhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHH
Confidence 00000000 0011111111000000 0
Q ss_pred cc----ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 209 FD----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 209 ~~----~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+. ....+....+.++++|+|+|+|++|.++|++.+..+++.+++ .+++++++ ||+.. .|+++.+.|.+||.+
T Consensus 466 ~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 544 (555)
T 3i28_A 466 YRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH-LKRGHIEDCGHWTQMDKPTEVNQILIKWLDS 544 (555)
T ss_dssp TSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred HHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCC-ceEEEeCCCCCCcchhCHHHHHHHHHHHHHh
Confidence 00 000123345668999999999999999999998888887754 57888886 99866 789999999999999
Q ss_pred hcCCC
Q 011425 282 VLHPP 286 (486)
Q Consensus 282 ~l~~~ 286 (486)
....+
T Consensus 545 ~~~~~ 549 (555)
T 3i28_A 545 DARNP 549 (555)
T ss_dssp HTCC-
T ss_pred ccCCC
Confidence 87543
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-22 Score=194.72 Aligned_cols=233 Identities=14% Similarity=0.108 Sum_probs=153.5
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC-CCcchHH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKD 120 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-~~~~~~~ 120 (486)
+...+|.++.+..+ ++.|+|||+||++++...|..++..|.+. |.|+++|+||||.|...... ......+
T Consensus 13 ~~~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 83 (302)
T 1mj5_A 13 FIEIKGRRMAYIDE--------GTGDPILFQHGNPTSSYLWRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGPERYAYA 83 (302)
T ss_dssp EEEETTEEEEEEEE--------SCSSEEEEECCTTCCGGGGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCHH
T ss_pred EEEECCEEEEEEEc--------CCCCEEEEECCCCCchhhhHHHHHHhccC-CeEEEEcCCCCCCCCCCCCCCcccccHH
Confidence 33458889988766 23689999999999999999888888775 89999999999999865432 0101234
Q ss_pred HHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH---H---HHHHHHHHHHhhh------
Q 011425 121 DLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---F---DLMLELVDVYKIR------ 186 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~---~---~~~~~~~~~~~~~------ 186 (486)
++.+.+..+.+..+. .+++|+||||||.+++.+|..+|+ |+++|+++|.... . .........+...
T Consensus 84 ~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (302)
T 1mj5_A 84 EHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELV 163 (302)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhhhh
Confidence 444444333344466 899999999999999999999997 9999999876531 0 0000000000000
Q ss_pred ---------------CCchhHHHHHHHHHHH----------Hhhhhcccc---------cccchhhhCCCCCCCEEEEEe
Q 011425 187 ---------------LPKFTVKMAVQYMRRV----------IQKKAKFDI---------MDLNCLKLAPKTFIPALFGHA 232 (486)
Q Consensus 187 ---------------~p~~~~~~~~~~~~~~----------~~~~~~~~~---------~~~~~~~~l~~i~~PvLii~G 232 (486)
...........+.... ......+.. ...+....+.++++|+|+|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g 243 (302)
T 1mj5_A 164 LQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINA 243 (302)
T ss_dssp TTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEE
T ss_pred cChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEEEe
Confidence 0000011111110000 000000000 011234556789999999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHHHhcCC
Q 011425 233 SEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 233 ~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~~~l~~ 285 (486)
++|.++|++.++.+.+.++. +++++++||+.. .|+++.+.|.+|+.+....
T Consensus 244 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 244 EPGALTTGRMRDFCRTWPNQ--TEITVAGAHFIQEDSPDEIGAAIAAFVRRLRPA 296 (302)
T ss_dssp EECSSSSHHHHHHHTTCSSE--EEEEEEESSCGGGTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCChHHHHHHHHhcCC--ceEEecCcCcccccCHHHHHHHHHHHHHhhccc
Confidence 99999999999988888766 677774499865 7899999999999987654
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-23 Score=203.67 Aligned_cols=224 Identities=13% Similarity=0.128 Sum_probs=147.4
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHH
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~ 125 (486)
++..|.+..+- +..|+|||+||++++...|..++..| ||.|+++|+||+|.|+...... ...+++.+.
T Consensus 68 ~~~~~~~~~~g-------~~~~~vv~~hG~~~~~~~~~~~~~~l---g~~Vi~~D~~G~G~S~~~~~~~--~~~~~~a~d 135 (330)
T 3p2m_A 68 QAGAISALRWG-------GSAPRVIFLHGGGQNAHTWDTVIVGL---GEPALAVDLPGHGHSAWREDGN--YSPQLNSET 135 (330)
T ss_dssp EETTEEEEEES-------SSCCSEEEECCTTCCGGGGHHHHHHS---CCCEEEECCTTSTTSCCCSSCB--CCHHHHHHH
T ss_pred cCceEEEEEeC-------CCCCeEEEECCCCCccchHHHHHHHc---CCeEEEEcCCCCCCCCCCCCCC--CCHHHHHHH
Confidence 34567777662 23588999999999999999888877 8999999999999998543211 123444444
Q ss_pred HHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHH-------HHhhhCCchhHHHHHH
Q 011425 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD-------VYKIRLPKFTVKMAVQ 197 (486)
Q Consensus 126 i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~-------~~~~~~p~~~~~~~~~ 197 (486)
+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++............. ................
T Consensus 136 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (330)
T 3p2m_A 136 LAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLD 215 (330)
T ss_dssp HHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHH
T ss_pred HHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHH
Confidence 4444444467899999999999999999999998 9999999986543221111100 0000000000000000
Q ss_pred H-------------HHHHHhhhhcc---------ccc-c----cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 198 Y-------------MRRVIQKKAKF---------DIM-D----LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 198 ~-------------~~~~~~~~~~~---------~~~-~----~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
. ........... ... . .+....+.++++|+|+|+|++|.+++++.+..+.+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~ 295 (330)
T 3p2m_A 216 LTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRA 295 (330)
T ss_dssp HHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHC
T ss_pred HHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC
Confidence 0 00010000000 000 0 0112345678999999999999999999999999998
Q ss_pred CCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 251 AGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 251 ~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
++...++++++ ||+.. .|+++.+.|.+||.+
T Consensus 296 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 296 THFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp SSEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred CCCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 66433888887 99976 789999999999864
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=201.13 Aligned_cols=242 Identities=10% Similarity=0.070 Sum_probs=153.8
Q ss_pred EEEEcCCCcEE----EEEEEecCCCCCCCCCcEEEEeCCCCCChhh-------------HHHHH---HHhccCCeEEEEE
Q 011425 40 LEIRNARGHVL----QCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-------------ANEAA---VILLPSNITLFTL 99 (486)
Q Consensus 40 i~~~~~dG~~L----~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-------------~~~~~---~~L~~~Gy~Vv~~ 99 (486)
..+...+|..| .|..|-+. ...+.|+|||+||++++... |..++ ..|...||.|+++
T Consensus 15 ~~~~~~~g~~l~~~i~y~~~g~~---~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~ 91 (377)
T 3i1i_A 15 KEYTFENGRTIPVQMGYETYGTL---NRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICT 91 (377)
T ss_dssp EEEECTTSCEEEEEEEEEEESCC---CTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEE
T ss_pred cceeecCCCEeeeeEEEEeeccc---CCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEe
Confidence 34666777655 44444321 23456899999999998776 66666 6777789999999
Q ss_pred cCCCCCCCCC-------CCCC-----------CCcchHHHHHHHHHHHHhcCCCCcEE-EEEEcchHHHHHHHHhcCCC-
Q 011425 100 DFSGSGLSDG-------DYVS-----------LGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS- 159 (486)
Q Consensus 100 D~rG~G~S~~-------~~~~-----------~~~~~~~Dl~~~i~~l~~~~~~~~i~-LvGhSmGG~lAl~~A~~~p~- 159 (486)
|+||||.|.| .... .....++++.+.+..+.+..+.++++ |+||||||.+++.+|..+|+
T Consensus 92 D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~ 171 (377)
T 3i1i_A 92 DNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHM 171 (377)
T ss_dssp CCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTT
T ss_pred cccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHH
Confidence 9999987542 1000 00123566666666666666778886 99999999999999999998
Q ss_pred ccEEEE-cCCccCHHHHHHHH----HHHHhhh-----------CCchhH--------------HH---------------
Q 011425 160 IAGMVL-DSAFSDLFDLMLEL----VDVYKIR-----------LPKFTV--------------KM--------------- 194 (486)
Q Consensus 160 v~~lVl-~sp~~~~~~~~~~~----~~~~~~~-----------~p~~~~--------------~~--------------- 194 (486)
|+++|+ +++........... ....... .|.... ..
T Consensus 172 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (377)
T 3i1i_A 172 VERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPY 251 (377)
T ss_dssp BSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGG
T ss_pred HHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhcccccc
Confidence 999999 77665411110000 0000000 000000 00
Q ss_pred --------HHHHHHHHHhh----------------hhcccc--cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHH
Q 011425 195 --------AVQYMRRVIQK----------------KAKFDI--MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFN 248 (486)
Q Consensus 195 --------~~~~~~~~~~~----------------~~~~~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~ 248 (486)
...++...... ...++. ...+....+.++++|+|+|+|++|.++|++.+..+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~ 331 (377)
T 3i1i_A 252 EKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVD 331 (377)
T ss_dssp TCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHH
Confidence 01111100000 000000 0012244567899999999999999999999999998
Q ss_pred HcC---CCcEEEEeCC--CCCCC--ChHHHHHHHHHHHHHhcC
Q 011425 249 AYA---GDKNIIKFDG--DHNSS--RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 249 ~l~---~~~~l~~~~g--gH~~~--~p~~~~~~I~~FL~~~l~ 284 (486)
.+. .+.+++++++ ||+.. .|+++.+.|.+||.+.+.
T Consensus 332 ~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 332 LLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp HHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCCS
T ss_pred HHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhhh
Confidence 882 4567888875 89865 789999999999998653
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.6e-22 Score=217.84 Aligned_cols=232 Identities=21% Similarity=0.210 Sum_probs=172.7
Q ss_pred eEEEEEEEcCCC-cEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh---hhHH-----HHHHHhccCCeEEEEEcCCCCCC
Q 011425 36 KRQDLEIRNARG-HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR---ADAN-----EAAVILLPSNITLFTLDFSGSGL 106 (486)
Q Consensus 36 ~~~~i~~~~~dG-~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~---~~~~-----~~~~~L~~~Gy~Vv~~D~rG~G~ 106 (486)
..+.+.+...+| ..|.+++|.|.+....++.|+||++||+++.. ..|. .++..|+++||.|+++|+||+|.
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~ 565 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPR 565 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSS
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCC
Confidence 457888999999 99999999997543445689999999998764 3343 57888989999999999999999
Q ss_pred CCCCCC-----CCCcchHHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH
Q 011425 107 SDGDYV-----SLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE 178 (486)
Q Consensus 107 S~~~~~-----~~~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~ 178 (486)
+...+. ..+...++|+.++++++.++.. ..+++|+||||||++++.+|..+|+ ++++|+++|..+.......
T Consensus 566 s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~ 645 (741)
T 2ecf_A 566 RGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSH 645 (741)
T ss_dssp SCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBHH
T ss_pred CChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhccc
Confidence 764321 1222347999999999988743 3689999999999999999999987 9999999998764211000
Q ss_pred HHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcE
Q 011425 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKN 255 (486)
Q Consensus 179 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~ 255 (486)
+...+. ..+.... .. +...++...+.++++|+|+++|+.|.+++++.+..+++.+. ...+
T Consensus 646 ~~~~~~-~~~~~~~----~~------------~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 708 (741)
T 2ecf_A 646 YTERYM-DLPARND----AG------------YREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFE 708 (741)
T ss_dssp HHHHHH-CCTGGGH----HH------------HHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCE
T ss_pred cchhhc-CCcccCh----hh------------hhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceE
Confidence 000000 0110000 00 00113445567788999999999999999999999998875 3468
Q ss_pred EEEeCC-CCCCC--ChHHHHHHHHHHHHHhcC
Q 011425 256 IIKFDG-DHNSS--RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 256 l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l~ 284 (486)
++++++ ||... .++++.+.+.+||.++++
T Consensus 709 ~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 709 LMTYPGAKHGLSGADALHRYRVAEAFLGRCLK 740 (741)
T ss_dssp EEEETTCCSSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCCCCCchhHHHHHHHHHHHHhcC
Confidence 999998 99987 347899999999999875
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-22 Score=184.44 Aligned_cols=213 Identities=15% Similarity=0.068 Sum_probs=153.5
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC---
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG--- 115 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~--- 115 (486)
++.+...+|..+. +|.|. ++.|+||++||++++...|..++..|+++||.|+++|+||+|.|........
T Consensus 4 ~~~~~~~~g~~~~--~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~ 76 (238)
T 1ufo_A 4 RTERLTLAGLSVL--ARIPE-----APKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPR 76 (238)
T ss_dssp EEEEEEETTEEEE--EEEES-----SCCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTT
T ss_pred eecccccCCEEEE--EEecC-----CCccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccc
Confidence 3444455675544 56664 2789999999999999999988899999999999999999999976443322
Q ss_pred --------c-chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhh
Q 011425 116 --------W-HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKI 185 (486)
Q Consensus 116 --------~-~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~ 185 (486)
. ..++|+.++++++.+... .+++++||||||.+++.+|..+|+ +.++++.++....... .. ..
T Consensus 77 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~-~~-----~~ 149 (238)
T 1ufo_A 77 YVEEVYRVALGFKEEARRVAEEAERRFG-LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLP-QG-----QV 149 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCC-TT-----CC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccC-CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhh-hh-----hc
Confidence 1 226788889999876633 899999999999999999999998 7888887765321000 00 00
Q ss_pred hCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHcCC-----CcEEEEe
Q 011425 186 RLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAG-----DKNIIKF 259 (486)
Q Consensus 186 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~~-----~~~l~~~ 259 (486)
..|. . ...+ ...+....+..+ ++|+|+++|++|.++|++.+..+.+.++. ..+++++
T Consensus 150 ~~~~---~--~~~~------------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (238)
T 1ufo_A 150 VEDP---G--VLAL------------YQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVE 212 (238)
T ss_dssp CCCH---H--HHHH------------HHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEE
T ss_pred cCCc---c--cchh------------hcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEe
Confidence 0110 0 0000 011233344556 79999999999999999999999998862 6788999
Q ss_pred CC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 260 DG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 260 ~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
++ ||... .+..+.+.+||.+++.
T Consensus 213 ~~~~H~~~--~~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 213 EGAGHTLT--PLMARVGLAFLEHWLE 236 (238)
T ss_dssp TTCCSSCC--HHHHHHHHHHHHHHHH
T ss_pred CCCCcccH--HHHHHHHHHHHHHHHh
Confidence 97 99876 3456677778777653
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=192.58 Aligned_cols=231 Identities=16% Similarity=0.168 Sum_probs=139.1
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchH
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEK 119 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~ 119 (486)
..+...+|..+.+..+-+ +..++|||+||++++... ..+...+...+|+|+++|+||||.|+....... ...
T Consensus 17 ~~~~~~~g~~l~~~~~g~------~~g~~vvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~-~~~ 88 (317)
T 1wm1_A 17 GWLDTGDGHRIYWELSGN------PNGKPAVFIHGGPGGGIS-PHHRQLFDPERYKVLLFDQRGCGRSRPHASLDN-NTT 88 (317)
T ss_dssp EEEECSSSCEEEEEEEEC------TTSEEEEEECCTTTCCCC-GGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTT-CSH
T ss_pred eEEEcCCCcEEEEEEcCC------CCCCcEEEECCCCCcccc-hhhhhhccccCCeEEEECCCCCCCCCCCccccc-ccH
Confidence 345666899998876632 235779999998765432 122334445789999999999999975322111 223
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHH------------HHHHHHhhh
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML------------ELVDVYKIR 186 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~------------~~~~~~~~~ 186 (486)
+++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++......... .....+...
T Consensus 89 ~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (317)
T 1wm1_A 89 WHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSI 168 (317)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHHhh
Confidence 4444444455555577899999999999999999999998 999999887543211100 000000000
Q ss_pred CCch----hHHHH---------------HHHHHHHHhh-------h----------------------hccccc-ccc-h
Q 011425 187 LPKF----TVKMA---------------VQYMRRVIQK-------K----------------------AKFDIM-DLN-C 216 (486)
Q Consensus 187 ~p~~----~~~~~---------------~~~~~~~~~~-------~----------------------~~~~~~-~~~-~ 216 (486)
.+.. ..... ...+...... . ...... ... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (317)
T 1wm1_A 169 LSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQL 248 (317)
T ss_dssp SCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred ccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccchhh
Confidence 0000 00000 0000000000 0 000000 011 2
Q ss_pred hhhCCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCCh---HHHHHHHHHHH
Q 011425 217 LKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRP---QFYYDSVSIFF 279 (486)
Q Consensus 217 ~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p---~~~~~~I~~FL 279 (486)
...+.++. +|+|+|+|++|.++|+..+..+.+.+++ .+++++++ ||....+ +++.+.|.+|+
T Consensus 249 ~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~-~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~ 315 (317)
T 1wm1_A 249 LRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE-AELHIVEGAGHSYDEPGILHQLMIATDRFA 315 (317)
T ss_dssp HHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTT-SEEEEETTCCSSTTSHHHHHHHHHHHHHHT
T ss_pred HhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCC-ceEEEECCCCCCCCCcchHHHHHHHHHHHh
Confidence 33455674 9999999999999999999999998865 67888887 9987643 44555555554
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-21 Score=189.41 Aligned_cols=232 Identities=17% Similarity=0.160 Sum_probs=138.9
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~ 118 (486)
...+...+|..|++..+-+ +..++|||+||++++... ..+...+...||+|+++|+||||.|+....... ..
T Consensus 13 ~~~~~~~~g~~l~y~~~G~------~~g~pvvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~-~~ 84 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGN------PHGKPVVMLHGGPGGGCN-DKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVD-NT 84 (313)
T ss_dssp EEEEECSSSCEEEEEEEEC------TTSEEEEEECSTTTTCCC-GGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTT-CC
T ss_pred cceEEcCCCCEEEEEecCC------CCCCeEEEECCCCCcccc-HHHHHhcCcCcceEEEECCCCCcCCCCCccccc-cc
Confidence 3446666899998877632 235779999998765432 223334545799999999999999975322111 12
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHH------------HHHHHHHhh
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM------------LELVDVYKI 185 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~------------~~~~~~~~~ 185 (486)
.+++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++........ ......+..
T Consensus 85 ~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (313)
T 1azw_A 85 TWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLN 164 (313)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhhhhhhhchHHHHHHhh
Confidence 34444444444455577899999999999999999999998 99999998764321100 000000000
Q ss_pred hCCch----hHHHH---------------HHHHHH-------------------------HHhhh-----hccccc--cc
Q 011425 186 RLPKF----TVKMA---------------VQYMRR-------------------------VIQKK-----AKFDIM--DL 214 (486)
Q Consensus 186 ~~p~~----~~~~~---------------~~~~~~-------------------------~~~~~-----~~~~~~--~~ 214 (486)
..+.. ..... ...+.. ..... ...... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
T 1azw_A 165 AIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVED 244 (313)
T ss_dssp TSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTT
T ss_pred ccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhcccccccccc
Confidence 00000 00000 000000 00000 000000 11
Q ss_pred chhhhCCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHH
Q 011425 215 NCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 215 ~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~ 280 (486)
.....+.++. +|+|+|+|++|.++|++.++.+++.+++ .+++++++ ||....+ +..+.+.+++.
T Consensus 245 ~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~~-~~~~~~~~~i~ 310 (313)
T 1azw_A 245 QLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSAFEP-ENVDALVRATD 310 (313)
T ss_dssp HHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTT-SEEEEETTCCSSTTSH-HHHHHHHHHHH
T ss_pred hhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhCCC-cEEEEeCCCCCCcCCC-ccHHHHHHHHh
Confidence 1233455674 9999999999999999999999998865 57888887 9987654 33444555444
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-22 Score=199.60 Aligned_cols=122 Identities=21% Similarity=0.171 Sum_probs=94.5
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~ 123 (486)
..+|.++++..+-|. +...|+|||+||++++...|..++..|+++||.|+++|+||+|.|........+ ...++.
T Consensus 9 ~~~g~~l~y~~~G~~----~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~-~~~~~~ 83 (356)
T 2e3j_A 9 NCRGTRIHAVADSPP----DQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAY-RIKELV 83 (356)
T ss_dssp EETTEEEEEEEECCT----TCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGG-SHHHHH
T ss_pred ccCCeEEEEEEecCC----CCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCccccc-CHHHHH
Confidence 358999998887542 135789999999999999999899999888999999999999999865431111 123333
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~ 170 (486)
+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++..
T Consensus 84 ~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 84 GDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 333333333366899999999999999999999998 99999988754
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.8e-22 Score=192.25 Aligned_cols=224 Identities=12% Similarity=0.148 Sum_probs=159.6
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW 116 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~ 116 (486)
..+...+|..+.+++..|.....+++.|+||++||++ ++...+..++..|+++||.|+++|+||+|.+.+.... .
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~--~ 94 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYNFL--S 94 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSCTH--H
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCCcC--c
Confidence 3456678888886554443211226789999999943 5667778889999999999999999999987643211 1
Q ss_pred chHHHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhc-CCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCc
Q 011425 117 HEKDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAE-DPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPK 189 (486)
Q Consensus 117 ~~~~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~-~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~ 189 (486)
....|+.++++++.+.. +..+|+|+||||||.+++.+|.. .+. ++++|+++|..++... +. ..+.
T Consensus 95 ~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~-------~~-~~~~ 166 (276)
T 3hxk_A 95 QNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG-------WP-SDLS 166 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS-------CS-SSSS
T ss_pred hHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh-------CC-cchh
Confidence 23789999999998864 23699999999999999999988 444 9999999987753221 00 0000
Q ss_pred hhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCC
Q 011425 190 FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNS 265 (486)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~ 265 (486)
+ ..++ .... ...+....+..+.+|+|+++|++|.++|++.+..+++.+. ...+++++++ +|..
T Consensus 167 ~-----~~~~------~~~~--~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 233 (276)
T 3hxk_A 167 H-----FNFE------IENI--SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGV 233 (276)
T ss_dssp S-----SCCC------CSCC--GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTC
T ss_pred h-----hhcC------chhh--hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCc
Confidence 0 0000 0000 2234556677889999999999999999999999998875 3468899997 9975
Q ss_pred C--Ch-------------HHHHHHHHHHHHHhcCCC
Q 011425 266 S--RP-------------QFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 266 ~--~p-------------~~~~~~I~~FL~~~l~~~ 286 (486)
. .+ .++.+.+.+||++.....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 269 (276)
T 3hxk_A 234 SLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNL 269 (276)
T ss_dssp TTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTT
T ss_pred cccCccccccccccCchHHHHHHHHHHHHHhCcccc
Confidence 4 22 578889999999887543
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=186.58 Aligned_cols=217 Identities=15% Similarity=0.135 Sum_probs=142.3
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc-hHHHHHHH
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH-EKDDLKVV 125 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~-~~~Dl~~~ 125 (486)
|.+|.+..+-+ .++.|+|||+||++++...|. .+..|+ +||.|+++|+||+|.|+... ..... .++|+.++
T Consensus 2 g~~l~y~~~g~-----~~~~~~vv~~hG~~~~~~~~~-~~~~l~-~g~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~ 73 (245)
T 3e0x_A 2 NAMLHYVHVGN-----KKSPNTLLFVHGSGCNLKIFG-ELEKYL-EDYNCILLDLKGHGESKGQC-PSTVYGYIDNVANF 73 (245)
T ss_dssp CCCCCEEEEEC-----TTCSCEEEEECCTTCCGGGGT-TGGGGC-TTSEEEEECCTTSTTCCSCC-CSSHHHHHHHHHHH
T ss_pred CceeEEEecCC-----CCCCCEEEEEeCCcccHHHHH-HHHHHH-hCCEEEEecCCCCCCCCCCC-CcCHHHHHHHHHHH
Confidence 44555555532 236799999999999999998 777776 69999999999999998332 22221 13333333
Q ss_pred HHHHH--hcCCCCcEEEEEEcchHHHHHHHHhc-CCCccEEEEcCCccCHHHHHHHHHHHHhhhCCc----------hhH
Q 011425 126 VSYLR--GNKQTSRIGLWGRSMGAVTSLLYGAE-DPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPK----------FTV 192 (486)
Q Consensus 126 i~~l~--~~~~~~~i~LvGhSmGG~lAl~~A~~-~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~----------~~~ 192 (486)
+++.. +..+ +++|+||||||.+++.+|.. +|+|+++|+++|..............+...... ...
T Consensus 74 ~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (245)
T 3e0x_A 74 ITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDN 151 (245)
T ss_dssp HHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCS
T ss_pred HHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCccccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccch
Confidence 31111 3333 99999999999999999999 888999999998765411111111111000000 000
Q ss_pred HHHHHH----------HHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-
Q 011425 193 KMAVQY----------MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG- 261 (486)
Q Consensus 193 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g- 261 (486)
.....+ ....+.. ....+....+.++++|+|+++|++|.+++++.+..+.+.+++ .+++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 225 (245)
T 3e0x_A 152 PLSEKYFETLEKDPDIMINDLIA-----CKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVEN-SELKIFETG 225 (245)
T ss_dssp HHHHHHHTTSCSSHHHHHHHHHH-----HHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSS-EEEEEESSC
T ss_pred HHHHHHHHHHhcCcHHHHHHHHH-----hccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-ceEEEeCCC
Confidence 000000 0000000 011233455677899999999999999999999999999864 67888886
Q ss_pred CCCCC--ChHHHHHHHHHHH
Q 011425 262 DHNSS--RPQFYYDSVSIFF 279 (486)
Q Consensus 262 gH~~~--~p~~~~~~I~~FL 279 (486)
||... .++++.+.|.+||
T Consensus 226 gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 226 KHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGGHHHHTHHHHHHHHHTTC
T ss_pred CcceEEecHHHHHHHHHhhC
Confidence 99865 7888888888774
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=194.26 Aligned_cols=226 Identities=14% Similarity=0.136 Sum_probs=141.2
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-HHH-----HHHHhccCCeEEEEEcCCCCCCCCCCC-CCC---
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANE-----AAVILLPSNITLFTLDFSGSGLSDGDY-VSL--- 114 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~~~-----~~~~L~~~Gy~Vv~~D~rG~G~S~~~~-~~~--- 114 (486)
.+|.+|.+..+-+. ....|+|||+||++++... |.. ++..|++ +|.|+++|+||||.|.... ...
T Consensus 18 ~~~~~l~y~~~G~~----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~~~~~~ 92 (286)
T 2qmq_A 18 TPYGSVTFTVYGTP----KPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPLGYQYP 92 (286)
T ss_dssp ETTEEEEEEEESCC----CTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCTTCCCC
T ss_pred cCCeEEEEEeccCC----CCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCCCCCcc
Confidence 47888988877321 1257999999999999875 554 6677766 6999999999999886432 222
Q ss_pred Ccch-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC---HHHHHHHHHHHHh-----
Q 011425 115 GWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD---LFDLMLELVDVYK----- 184 (486)
Q Consensus 115 ~~~~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~---~~~~~~~~~~~~~----- 184 (486)
.... ++|+.++++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++... .............
T Consensus 93 ~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (286)
T 2qmq_A 93 SLDQLADMIPCILQYL----NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPD 168 (286)
T ss_dssp CHHHHHHTHHHHHHHH----TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTSCHHH
T ss_pred CHHHHHHHHHHHHHHh----CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccccchH
Confidence 2211 44455555444 56799999999999999999999997 999999998652 2111111100000
Q ss_pred ----hhCCchhH---HHHHHHHHHHHhhh----------hcc-cccccc-hhhhCCCCCCCEEEEEeCCCCCCCHHHHHH
Q 011425 185 ----IRLPKFTV---KMAVQYMRRVIQKK----------AKF-DIMDLN-CLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (486)
Q Consensus 185 ----~~~p~~~~---~~~~~~~~~~~~~~----------~~~-~~~~~~-~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 245 (486)
........ ......+...+... ..+ .....+ ....+.++++|+|+|+|++|.++| .....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~ 247 (286)
T 2qmq_A 169 MILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVVEC 247 (286)
T ss_dssp HHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHHHH
T ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHHHH
Confidence 00000000 00000011100000 000 000111 123456789999999999999998 33444
Q ss_pred HHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 246 IFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 246 l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
+.+..+...+++++++ ||+.. .|+++.+.|.+||.
T Consensus 248 ~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 248 NSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp HHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred HHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 4443333678999987 99875 78999999999985
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=190.17 Aligned_cols=228 Identities=12% Similarity=0.015 Sum_probs=142.3
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl 122 (486)
..+|..|+|..+.+ +...|+|||+||++++...|..++..|++ +|+|+++|+||||.|+.....+.+.. ++|+
T Consensus 10 ~~~g~~l~y~~~~~-----G~~~p~vvllHG~~~~~~~w~~~~~~L~~-~~rvia~DlrGhG~S~~~~~~~~~~~~a~dl 83 (276)
T 2wj6_A 10 LVFDNKLSYIDNQR-----DTDGPAILLLPGWCHDHRVYKYLIQELDA-DFRVIVPNWRGHGLSPSEVPDFGYQEQVKDA 83 (276)
T ss_dssp EETTEEEEEEECCC-----CCSSCEEEEECCTTCCGGGGHHHHHHHTT-TSCEEEECCTTCSSSCCCCCCCCHHHHHHHH
T ss_pred eeCCeEEEEEEecC-----CCCCCeEEEECCCCCcHHHHHHHHHHHhc-CCEEEEeCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 35788888765411 23358999999999999999999998876 69999999999999986533333221 4555
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccC--HHHHHHHHHHHH-------------hh
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSD--LFDLMLELVDVY-------------KI 185 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~--~~~~~~~~~~~~-------------~~ 185 (486)
.++++.+ +.++++|+||||||.+++.+|..+ |+ |+++|++++... ............ ..
T Consensus 84 ~~ll~~l----~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (276)
T 2wj6_A 84 LEILDQL----GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDV 159 (276)
T ss_dssp HHHHHHH----TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHHHHHHHH
T ss_pred HHHHHHh----CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHHHHHHHH
Confidence 5555555 778999999999999999999999 98 999999976421 111110000000 00
Q ss_pred hCCchhHHHHHHHHHH------------HHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCC--HHHHHHHHHHcC
Q 011425 186 RLPKFTVKMAVQYMRR------------VIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIR--ARHSDLIFNAYA 251 (486)
Q Consensus 186 ~~p~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp--~~~~~~l~~~l~ 251 (486)
.............+.. .............+....+..+++|+++++|..|...+ ......+.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p 239 (276)
T 2wj6_A 160 WLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHP 239 (276)
T ss_dssp HHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCT
T ss_pred hhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCC
Confidence 0000000000000000 00000000000001223456788999999875444332 234456666665
Q ss_pred CCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 252 GDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 252 ~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
+.+++++++ ||+.. .|+++++.|.+||.+.
T Consensus 240 -~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 240 -WFSYAKLGGPTHFPAIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp -TEEEEECCCSSSCHHHHSHHHHHHHHHHHHHHH
T ss_pred -CeEEEEeCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 567888887 99866 7999999999999865
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-23 Score=198.29 Aligned_cols=221 Identities=15% Similarity=0.075 Sum_probs=159.2
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCC---CCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFP---EDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~---~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
..+.+.+...+|..+.+.+| |.... ..++.|+|||+||++ ++...|..++..|+++||.|+++|+||+|.+..
T Consensus 18 ~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~ 96 (283)
T 3bjr_A 18 QGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQP 96 (283)
T ss_dssp CSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSS
T ss_pred CCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCcccc
Confidence 44678888889988888899 75311 346789999999954 556678889999999999999999999998731
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcC---CC--CcEEEEEEcchHHHHHHHHhcCCC--------------ccEEEEcCCcc
Q 011425 110 DYVSLGWHEKDDLKVVVSYLRGNK---QT--SRIGLWGRSMGAVTSLLYGAEDPS--------------IAGMVLDSAFS 170 (486)
Q Consensus 110 ~~~~~~~~~~~Dl~~~i~~l~~~~---~~--~~i~LvGhSmGG~lAl~~A~~~p~--------------v~~lVl~sp~~ 170 (486)
.. .....|+.++++++.+.. +. .+++|+||||||.+++.+|..+|+ ++++|+++|..
T Consensus 97 ~~----~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~ 172 (283)
T 3bjr_A 97 LG----LAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVI 172 (283)
T ss_dssp CB----THHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCC
T ss_pred Cc----hhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcc
Confidence 11 123688999999998753 22 589999999999999999999874 89999999887
Q ss_pred CHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 171 DLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 171 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
+....+.... ..+...+ -.....+....+..+.+|+|+++|++|.++|++.+..+++.+
T Consensus 173 ~~~~~~~~~~----------------~~~~~~~-----~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l 231 (283)
T 3bjr_A 173 SPLLGFPKDD----------------ATLATWT-----PTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATAL 231 (283)
T ss_dssp CTTSBC------------------------CCC-----CCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHH
T ss_pred cccccccccc----------------chHHHHH-----HHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHH
Confidence 5321100000 0000000 011122444566788899999999999999999999998887
Q ss_pred CC---CcEEEEeCC-CCCCC--C-------------hHHHHHHHHHHHHHh
Q 011425 251 AG---DKNIIKFDG-DHNSS--R-------------PQFYYDSVSIFFYNV 282 (486)
Q Consensus 251 ~~---~~~l~~~~g-gH~~~--~-------------p~~~~~~I~~FL~~~ 282 (486)
.. ..+++++++ +|... . .+++.+.+.+||.++
T Consensus 232 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 232 ATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 53 468889988 99543 2 267888999999763
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.7e-22 Score=197.21 Aligned_cols=234 Identities=13% Similarity=0.125 Sum_probs=150.8
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh-------------hHHHHHH---HhccCCeEEEEEcCCC--CCCC
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-------------DANEAAV---ILLPSNITLFTLDFSG--SGLS 107 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~-------------~~~~~~~---~L~~~Gy~Vv~~D~rG--~G~S 107 (486)
+|..|.+..+-+. .....|+|||+||++++.. .|..++. .|+..||.|+++|+|| +|.|
T Consensus 29 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s 105 (366)
T 2pl5_A 29 SPVVIAYETYGTL---SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSS 105 (366)
T ss_dssp SSEEEEEEEEECC---CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cCceeeEEeccCc---CCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCC
Confidence 4557887777542 1224689999999999887 6766663 4667799999999999 8888
Q ss_pred CCCCCCC----C------cchHHHHHHHHHHHHhcCCCCcE-EEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH
Q 011425 108 DGDYVSL----G------WHEKDDLKVVVSYLRGNKQTSRI-GLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL 175 (486)
Q Consensus 108 ~~~~~~~----~------~~~~~Dl~~~i~~l~~~~~~~~i-~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~ 175 (486)
....... . ....+++.+.+..+.+..+.+++ +|+||||||.+++.+|..+|+ |+++|++++.......
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 185 (366)
T 2pl5_A 106 GPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAM 185 (366)
T ss_dssp STTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHH
T ss_pred CCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCc
Confidence 6432100 0 12245555555555555567888 899999999999999999997 9999999987643221
Q ss_pred HHHH---HHHHhhhC------------CchhHH--HH--------HHHHHHHHhhhh-----------------------
Q 011425 176 MLEL---VDVYKIRL------------PKFTVK--MA--------VQYMRRVIQKKA----------------------- 207 (486)
Q Consensus 176 ~~~~---~~~~~~~~------------p~~~~~--~~--------~~~~~~~~~~~~----------------------- 207 (486)
.... ........ +..... .. ...+...+....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (366)
T 2pl5_A 186 QIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESF 265 (366)
T ss_dssp HHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCS
T ss_pred cchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhh
Confidence 1110 00000000 000000 00 000111110000
Q ss_pred -----------------cccccc-cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEe-CC-CCC
Q 011425 208 -----------------KFDIMD-LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKF-DG-DHN 264 (486)
Q Consensus 208 -----------------~~~~~~-~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~-~g-gH~ 264 (486)
.++... .+....+.++++|+|+|+|++|.++|++.+..+++.++. ..+++++ ++ ||+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 345 (366)
T 2pl5_A 266 VDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHD 345 (366)
T ss_dssp SSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSG
T ss_pred hcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCcc
Confidence 000000 012236678999999999999999999999999998862 5678888 66 998
Q ss_pred CC--ChHHHHHHHHHHHHHh
Q 011425 265 SS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 265 ~~--~p~~~~~~I~~FL~~~ 282 (486)
.. .++++.+.|.+||.+.
T Consensus 346 ~~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 346 SFLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp GGGSCCHHHHHHHHHHHHCC
T ss_pred hhhcChhHHHHHHHHHHccC
Confidence 76 6899999999999753
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=214.27 Aligned_cols=230 Identities=20% Similarity=0.230 Sum_probs=169.0
Q ss_pred EEEEEEEcCCC-cEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh---hhHHH----HHHHhccCCeEEEEEcCCCCCCCC
Q 011425 37 RQDLEIRNARG-HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR---ADANE----AAVILLPSNITLFTLDFSGSGLSD 108 (486)
Q Consensus 37 ~~~i~~~~~dG-~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~---~~~~~----~~~~L~~~Gy~Vv~~D~rG~G~S~ 108 (486)
.+.+.+...+| ..+.++++.|.+...+++.|+||++||+++.. ..|.. ++..|+++||.|+++|+||+|.+.
T Consensus 455 ~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~ 534 (706)
T 2z3z_A 455 IRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRG 534 (706)
T ss_dssp EEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSC
T ss_pred cEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccc
Confidence 35677888899 99999999998654445679999999987654 34443 678888899999999999999886
Q ss_pred CCC-----CCCCcchHHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHH
Q 011425 109 GDY-----VSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELV 180 (486)
Q Consensus 109 ~~~-----~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~ 180 (486)
..+ ...+...++|+.++++++.+... ..+++|+||||||++++.+|..+|+ ++++|+++|..+.......+.
T Consensus 535 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~ 614 (706)
T 2z3z_A 535 AAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYG 614 (706)
T ss_dssp HHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBHHHH
T ss_pred hhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHhhhh
Confidence 432 12222347899999999987643 3689999999999999999999998 899999999876421111111
Q ss_pred HHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEE
Q 011425 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNII 257 (486)
Q Consensus 181 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~ 257 (486)
..+. ..+...... +...++...+.++++|+|+++|+.|.++|++.+.++++.+. ...+++
T Consensus 615 ~~~~-~~~~~~~~~----------------~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 677 (706)
T 2z3z_A 615 ERYF-DAPQENPEG----------------YDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYY 677 (706)
T ss_dssp HHHH-CCTTTCHHH----------------HHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEE
T ss_pred hhhc-CCcccChhh----------------hhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 1110 011000000 00113445667788999999999999999999999988874 357899
Q ss_pred EeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 258 KFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 258 ~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
++++ ||... .++++.+.+.+||.+++
T Consensus 678 ~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 678 VYPSHEHNVMGPDRVHLYETITRYFTDHL 706 (706)
T ss_dssp EETTCCSSCCTTHHHHHHHHHHHHHHHHC
T ss_pred EeCCCCCCCCcccHHHHHHHHHHHHHHhC
Confidence 9998 99876 46889999999998864
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.2e-22 Score=190.31 Aligned_cols=214 Identities=13% Similarity=0.109 Sum_probs=136.2
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC-CCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ-TSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~LvG 142 (486)
+.+|+|||+||++++...|..++..|.++||+|+++|+||||.|+...... ...+++.+.+..+.+..+ .++++|+|
T Consensus 8 ~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~--~~~~~~a~dl~~~l~~l~~~~~~~lvG 85 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEI--HTFRDYSEPLMEVMASIPPDEKVVLLG 85 (264)
T ss_dssp -CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGC--CSHHHHHHHHHHHHHHSCTTCCEEEEE
T ss_pred CCCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccc--cCHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 467899999999999999999999998889999999999999997543211 112333333333333334 47999999
Q ss_pred EcchHHHHHHHHhcCCC-ccEEEEcCCccC-----HHHHHHHHHHHHhh--h------------CC----chhHHHHHHH
Q 011425 143 RSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLMLELVDVYKI--R------------LP----KFTVKMAVQY 198 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~-v~~lVl~sp~~~-----~~~~~~~~~~~~~~--~------------~p----~~~~~~~~~~ 198 (486)
|||||.+++.+|..+|+ |+++|++++... .......+...... . .+ ..........
T Consensus 86 hSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 2wfl_A 86 HSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALK 165 (264)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHH
T ss_pred eChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHH
Confidence 99999999999999998 999999886421 11111111111000 0 00 0000110000
Q ss_pred -----------HHHHHhhhhcccccc---cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CC
Q 011425 199 -----------MRRVIQKKAKFDIMD---LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DH 263 (486)
Q Consensus 199 -----------~~~~~~~~~~~~~~~---~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH 263 (486)
............... ..........++|+|+|+|++|.++|++.++.+.+.+++ .+++++++ ||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH 244 (264)
T 2wfl_A 166 MFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGA-DKVKEIKEADH 244 (264)
T ss_dssp TSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHCC-SEEEEETTCCS
T ss_pred HhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCCC-ceEEEeCCCCC
Confidence 000000000000000 000000011368999999999999999999999988864 57888886 99
Q ss_pred CCC--ChHHHHHHHHHHHH
Q 011425 264 NSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 264 ~~~--~p~~~~~~I~~FL~ 280 (486)
..+ .|+++.+.|.+|+.
T Consensus 245 ~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 245 MGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp CHHHHSHHHHHHHHHHHHC
T ss_pred chhhcCHHHHHHHHHHHhh
Confidence 976 89999999999974
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-22 Score=197.85 Aligned_cols=228 Identities=15% Similarity=0.141 Sum_probs=146.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+|..|.+..+ +.++.|+|||+||++++...|..++..|.+. |.|+++|+||||.|+..... . +..+++.+
T Consensus 28 ~~g~~l~y~~~------G~g~~~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~Dl~GhG~S~~~~~~-~-~~~~~~a~ 98 (318)
T 2psd_A 28 VLDSFINYYDS------EKHAENAVIFLHGNATSSYLWRHVVPHIEPV-ARCIIPDLIGMGKSGKSGNG-S-YRLLDHYK 98 (318)
T ss_dssp ETTEEEEEEEC------CSCTTSEEEEECCTTCCGGGGTTTGGGTTTT-SEEEEECCTTSTTCCCCTTS-C-CSHHHHHH
T ss_pred eCCeEEEEEEc------CCCCCCeEEEECCCCCcHHHHHHHHHHhhhc-CeEEEEeCCCCCCCCCCCCC-c-cCHHHHHH
Confidence 47888887654 2234579999999999999999888888764 79999999999999864221 1 22455555
Q ss_pred HHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH----------HHHHHHHH----HHHhh---
Q 011425 125 VVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL----------FDLMLELV----DVYKI--- 185 (486)
Q Consensus 125 ~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~----------~~~~~~~~----~~~~~--- 185 (486)
.+..+.+..+. ++++|+||||||.+++.+|..+|+ |+++|++++.... ...+..+. .....
T Consensus 99 dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (318)
T 2psd_A 99 YLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENN 178 (318)
T ss_dssp HHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHHHHTTTC
T ss_pred HHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchhhhhcch
Confidence 55555566677 899999999999999999999998 9999997532110 01110000 00000
Q ss_pred ---------h-CCchhHHHHHHHHHHH----------Hhhhhcccccc----------cchhhhCCCC-CCCEEEEEeCC
Q 011425 186 ---------R-LPKFTVKMAVQYMRRV----------IQKKAKFDIMD----------LNCLKLAPKT-FIPALFGHASE 234 (486)
Q Consensus 186 ---------~-~p~~~~~~~~~~~~~~----------~~~~~~~~~~~----------~~~~~~l~~i-~~PvLii~G~~ 234 (486)
. ...........+.... ........... .+....+..+ ++|+|+|+|++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~ 258 (318)
T 2psd_A 179 FFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDP 258 (318)
T ss_dssp HHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEE
T ss_pred HHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEEEEecc
Confidence 0 0000000000110000 00000000000 0112234567 99999999999
Q ss_pred CCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHHHhcC
Q 011425 235 DKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 235 D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~~~l~ 284 (486)
| ++++ .+..+.+.+++ .+++++++||+.. .|+++++.|.+||.+...
T Consensus 259 D-~~~~-~~~~~~~~~~~-~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~ 307 (318)
T 2psd_A 259 G-FFSN-AIVEGAKKFPN-TEFVKVKGLHFLQEDAPDEMGKYIKSFVERVLK 307 (318)
T ss_dssp C-SSHH-HHHHHHTTSSS-EEEEEEEESSSGGGTCHHHHHHHHHHHHHHHHC
T ss_pred c-cCcH-HHHHHHHhCCC-cEEEEecCCCCCHhhCHHHHHHHHHHHHHHhhc
Confidence 9 8888 77888877755 4566666699865 799999999999987654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-21 Score=210.51 Aligned_cols=238 Identities=18% Similarity=0.185 Sum_probs=173.6
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCC----CCCCCcEEEEeCCCCCChh--hHHHHHHHhccCCeEEEEEcCCC---CCCC
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFP----EDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSG---SGLS 107 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~----~~~~~p~VV~lHG~gg~~~--~~~~~~~~L~~~Gy~Vv~~D~rG---~G~S 107 (486)
.+.+.+...+|..+.+++|.|.+.. .+++.|+||++||+++... .|..++..|+++||.|+++|+|| +|.+
T Consensus 391 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 391 PQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 4677888889999999999997542 3456899999999987654 67778889999999999999999 6655
Q ss_pred CCCC--CCCCcchHHHHHHHHHHHHhcC--CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHH
Q 011425 108 DGDY--VSLGWHEKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (486)
Q Consensus 108 ~~~~--~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~ 182 (486)
.... ...+...++|+.++++++.++. +.++++|+||||||++++.++.. |+ ++++|+++|..++......
T Consensus 471 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~---- 545 (662)
T 3azo_A 471 YRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADG---- 545 (662)
T ss_dssp HHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTT----
T ss_pred HHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcc----
Confidence 3211 1222234799999999999883 44799999999999999998886 65 9999999998876543220
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhh--hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEE
Q 011425 183 YKIRLPKFTVKMAVQYMRRVIQKK--AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNII 257 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~ 257 (486)
....+.... ....+... ....+...++...+.++++|+|+++|+.|.++|+..+..+++.+.. .++++
T Consensus 546 ---~~~~~~~~~----~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~ 618 (662)
T 3azo_A 546 ---GTHDFESRY----LDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYL 618 (662)
T ss_dssp ---CSCGGGTTH----HHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEE
T ss_pred ---cccchhhHh----HHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 000000000 00000000 0000111244556778889999999999999999999999999864 46888
Q ss_pred EeCC-CCCCC---ChHHHHHHHHHHHHHhcCCC
Q 011425 258 KFDG-DHNSS---RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 258 ~~~g-gH~~~---~p~~~~~~I~~FL~~~l~~~ 286 (486)
++++ ||... .+..+.+.+.+||.+++...
T Consensus 619 ~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 619 SFEGEGHGFRRKETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp EETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCCCChHHHHHHHHHHHHHHHHHhCCC
Confidence 9988 99875 35788999999999998754
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=187.95 Aligned_cols=214 Identities=12% Similarity=0.094 Sum_probs=137.6
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC-CCcEEEEEEc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ-TSRIGLWGRS 144 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~LvGhS 144 (486)
+++|||+||++.+...|..++..|.+.||+|+++|+||||.|+...... +..+++.+.+..+.+..+ .++++|+|||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~--~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 80 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEI--GSFDEYSEPLLTFLEALPPGEKVILVGES 80 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGC--CSHHHHTHHHHHHHHTSCTTCCEEEEEEE
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccc--cCHHHHHHHHHHHHHhccccCCeEEEEEC
Confidence 4789999999999999999999998889999999999999997543211 123443333333334433 4799999999
Q ss_pred chHHHHHHHHhcCCC-ccEEEEcCCccC-----HHHHHHHHHHHHhhhCC----------------chhHHHHHHHH---
Q 011425 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLMLELVDVYKIRLP----------------KFTVKMAVQYM--- 199 (486)
Q Consensus 145 mGG~lAl~~A~~~p~-v~~lVl~sp~~~-----~~~~~~~~~~~~~~~~p----------------~~~~~~~~~~~--- 199 (486)
|||.+++.+|.++|+ |+++|++++... ................. ..........+
T Consensus 81 mGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (257)
T 3c6x_A 81 CGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTL 160 (257)
T ss_dssp THHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTT
T ss_pred cchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHHHHHhcC
Confidence 999999999999998 999999886421 11111111111000000 00000000000
Q ss_pred -----HHHHhhhhc-cccc--c---cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-
Q 011425 200 -----RRVIQKKAK-FDIM--D---LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS- 266 (486)
Q Consensus 200 -----~~~~~~~~~-~~~~--~---~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~- 266 (486)
......... .... . ..........++|+|+|+|++|.++|+..++.+.+.+++ .+++++++ ||..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~-~~~~~i~~~gH~~~~ 239 (257)
T 3c6x_A 161 CGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP-DKVYKVEGGDHKLQL 239 (257)
T ss_dssp SCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC-SEEEECCSCCSCHHH
T ss_pred CCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCCC-CeEEEeCCCCCCccc
Confidence 000000000 0000 0 000000111368999999999999999999999998864 57888876 99976
Q ss_pred -ChHHHHHHHHHHHHHh
Q 011425 267 -RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 267 -~p~~~~~~I~~FL~~~ 282 (486)
.|+++++.|.+|++..
T Consensus 240 e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 240 TKTKEIAEILQEVADTY 256 (257)
T ss_dssp HSHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhc
Confidence 8999999999999753
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=190.53 Aligned_cols=216 Identities=17% Similarity=0.116 Sum_probs=139.4
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC-CCcEEEEEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ-TSRIGLWGR 143 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~LvGh 143 (486)
..|+|||+||++++...|..++..|.+.||+|+++|+||||.|+...... ...+++.+.+..+.+..+ .++++|+||
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~--~~~~~~a~dl~~~l~~l~~~~~~~lvGh 80 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEEL--RTLYDYTLPLMELMESLSADEKVILVGH 80 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGC--CSHHHHHHHHHHHHHTSCSSSCEEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCcccc--cCHHHHHHHHHHHHHHhccCCCEEEEec
Confidence 35789999999999999999999998889999999999999997543211 123444443333334444 479999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCccC-----HHHHHHHHHHHHhh---------h-----CC----chhHHHHHHH-
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLMLELVDVYKI---------R-----LP----KFTVKMAVQY- 198 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~~-----~~~~~~~~~~~~~~---------~-----~p----~~~~~~~~~~- 198 (486)
||||.+++.+|..+|+ |+++|++++... .......+...... . .+ ..........
T Consensus 81 SmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T 1xkl_A 81 SLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKL 160 (273)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHT
T ss_pred CHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHHHHh
Confidence 9999999999999998 999999887421 11111111110000 0 00 0000100000
Q ss_pred ----------HHHHHhhhhcccccc---cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCC
Q 011425 199 ----------MRRVIQKKAKFDIMD---LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHN 264 (486)
Q Consensus 199 ----------~~~~~~~~~~~~~~~---~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~ 264 (486)
............... ..........++|+|+|+|++|.++|+..++.+.+.+++ .+++++++ ||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~-~~~~~i~~aGH~ 239 (273)
T 1xkl_A 161 YQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV-TEAIEIKGADHM 239 (273)
T ss_dssp STTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC-SEEEEETTCCSC
T ss_pred hccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCC-CeEEEeCCCCCC
Confidence 000000000000000 000000111468999999999999999999999988865 57888886 999
Q ss_pred CC--ChHHHHHHHHHHHHHhc
Q 011425 265 SS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 265 ~~--~p~~~~~~I~~FL~~~l 283 (486)
.+ .|+++++.|.+|+.+..
T Consensus 240 ~~~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 240 AMLCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp HHHHSHHHHHHHHHHHHHHCC
T ss_pred chhcCHHHHHHHHHHHHHHhc
Confidence 76 89999999999998754
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.1e-22 Score=188.37 Aligned_cols=206 Identities=13% Similarity=0.112 Sum_probs=134.8
Q ss_pred Cc-EEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 66 LP-CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 66 ~p-~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
.| +|||+||++++...|..++..|.+ +|+|+++|+||||.|+.. .... .++ .++.+.+..+ ++++|+|||
T Consensus 12 g~~~vvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~-~~~~---~~~---~~~~l~~~l~-~~~~lvGhS 82 (258)
T 1m33_A 12 GNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGF-GALS---LAD---MAEAVLQQAP-DKAIWLGWS 82 (258)
T ss_dssp CSSEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTCCSC-CCCC---HHH---HHHHHHTTSC-SSEEEEEET
T ss_pred CCCeEEEECCCCCChHHHHHHHHHhhc-CcEEEEeeCCCCCCCCCC-CCcC---HHH---HHHHHHHHhC-CCeEEEEEC
Confidence 46 899999999999999998888875 799999999999999865 2222 233 3444555545 799999999
Q ss_pred chHHHHHHHHhcCCC-ccEEEEcCCccCH----------HHHHHHHH-----------HHHhhh--CCchhHHHHHHHHH
Q 011425 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDL----------FDLMLELV-----------DVYKIR--LPKFTVKMAVQYMR 200 (486)
Q Consensus 145 mGG~lAl~~A~~~p~-v~~lVl~sp~~~~----------~~~~~~~~-----------~~~~~~--~p~~~~~~~~~~~~ 200 (486)
|||.+++.+|.++|+ |+++|++++.... ......+. ..+... ............+.
T Consensus 83 ~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (258)
T 1m33_A 83 LGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALK 162 (258)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchhhHHHHH
Confidence 999999999999998 9999998764210 00000000 000000 00000000001111
Q ss_pred HHHhhhh---------cc-cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--C
Q 011425 201 RVIQKKA---------KF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--R 267 (486)
Q Consensus 201 ~~~~~~~---------~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~ 267 (486)
..+.... .+ .....+....+.++++|+|+|+|++|.+++++.++.+.+.++ +.+++++++ ||+.. .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~ 241 (258)
T 1m33_A 163 KTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAAHAPFISH 241 (258)
T ss_dssp HHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT-TCEEEEETTCCSCHHHHS
T ss_pred HHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCc-cceEEEeCCCCCCccccC
Confidence 1000000 00 000112334566789999999999999999887777776664 457888886 99866 7
Q ss_pred hHHHHHHHHHHHHH
Q 011425 268 PQFYYDSVSIFFYN 281 (486)
Q Consensus 268 p~~~~~~I~~FL~~ 281 (486)
|+++.+.|.+|+.+
T Consensus 242 p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 242 PAEFCHLLVALKQR 255 (258)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999975
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-21 Score=188.83 Aligned_cols=230 Identities=13% Similarity=0.079 Sum_probs=139.9
Q ss_pred EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC--cchHH
Q 011425 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG--WHEKD 120 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~--~~~~~ 120 (486)
...+|.++++... +..|+|||+||++++...|..++..|.+ +|.|+++|+||||.|........ .+..+
T Consensus 10 ~~~~~~~~~~~~~--------g~g~~~vllHG~~~~~~~w~~~~~~l~~-~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~ 80 (291)
T 3qyj_A 10 VDTTEARINLVKA--------GHGAPLLLLHGYPQTHVMWHKIAPLLAN-NFTVVATDLRGYGDSSRPASVPHHINYSKR 80 (291)
T ss_dssp EECSSCEEEEEEE--------CCSSEEEEECCTTCCGGGGTTTHHHHTT-TSEEEEECCTTSTTSCCCCCCGGGGGGSHH
T ss_pred EecCCeEEEEEEc--------CCCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccccccCHH
Confidence 3468888887654 3568899999999999999988888865 89999999999999985433210 01233
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH-------HHHHHHHHHhh-hCC---
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-------LMLELVDVYKI-RLP--- 188 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~-------~~~~~~~~~~~-~~p--- 188 (486)
++.+.+..+.+..+..+++|+||||||.+++.+|..+|+ |+++|++++...... ........+.. ..+
T Consensus 81 ~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
T 3qyj_A 81 VMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLP 160 (291)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCSTTHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCCCch
Confidence 333333333333366899999999999999999999998 999999875432110 00000000000 000
Q ss_pred ------------------------chhHHHHHHHHHHHHhh------hhcccc-c----ccchhhhCCCCCCCEEEEEeC
Q 011425 189 ------------------------KFTVKMAVQYMRRVIQK------KAKFDI-M----DLNCLKLAPKTFIPALFGHAS 233 (486)
Q Consensus 189 ------------------------~~~~~~~~~~~~~~~~~------~~~~~~-~----~~~~~~~l~~i~~PvLii~G~ 233 (486)
.+.......+....... ...+.. . ..+....+.++++|+|+|+|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~ 240 (291)
T 3qyj_A 161 ETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGE 240 (291)
T ss_dssp HHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEET
T ss_pred HHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCccccceEEEecc
Confidence 00000111111000000 000000 0 001122467899999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHHH
Q 011425 234 EDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 234 ~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~~ 281 (486)
+|.+.+.......+.....+.....+++||+.. .|+++++.|.+||..
T Consensus 241 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 241 KGIIGRKYDVLATWRERAIDVSGQSLPCGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp TSSHHHHSCHHHHHHTTBSSEEEEEESSSSCHHHHSHHHHHHHHHHHHHC
T ss_pred cccccchhhHHHHHHhhcCCcceeeccCCCCchhhCHHHHHHHHHHHHhc
Confidence 997643221222223333556677788999876 899999999999974
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=180.75 Aligned_cols=188 Identities=21% Similarity=0.224 Sum_probs=141.9
Q ss_pred EEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEE-------------------cCCCCCCCCCCCCCC
Q 011425 54 HYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTL-------------------DFSGSGLSDGDYVSL 114 (486)
Q Consensus 54 ~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~-------------------D~rG~G~S~~~~~~~ 114 (486)
+++|. .+++.|+|||+||++++...|..++..|...||.|+++ |++|+ .+.......
T Consensus 14 ~~~p~---~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~~~~ 89 (232)
T 1fj2_A 14 AIVPA---ARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQEDES 89 (232)
T ss_dssp EEECC---SSCCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCBCHH
T ss_pred cccCC---CCCCCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-CcccccccH
Confidence 45564 34678999999999999999999999999889999998 66666 222211111
Q ss_pred Cc-chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCch
Q 011425 115 GW-HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKF 190 (486)
Q Consensus 115 ~~-~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~ 190 (486)
.. ..++++.++++++.+ .+. ++++|+||||||.+++.++..+|+ |+++|+++|+...... .+
T Consensus 90 ~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-----------~~-- 155 (232)
T 1fj2_A 90 GIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS-----------FP-- 155 (232)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-----------SC--
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc-----------cc--
Confidence 11 115677777777766 444 799999999999999999999987 9999999997653210 00
Q ss_pred hHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-----CCcEEEEeCC-CCC
Q 011425 191 TVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-----GDKNIIKFDG-DHN 264 (486)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-----~~~~l~~~~g-gH~ 264 (486)
.....+..+++|+|+++|++|.+++++.+..+++.+. .+.+++++++ ||.
T Consensus 156 ------------------------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~ 211 (232)
T 1fj2_A 156 ------------------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHS 211 (232)
T ss_dssp ------------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSS
T ss_pred ------------------------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcc
Confidence 0112355778999999999999999999988887764 3478999997 998
Q ss_pred CCChHHHHHHHHHHHHHhcCC
Q 011425 265 SSRPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 265 ~~~p~~~~~~I~~FL~~~l~~ 285 (486)
.. .+..+.+.+||.+.+..
T Consensus 212 ~~--~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 212 SC--QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp CC--HHHHHHHHHHHHHHSCC
T ss_pred cC--HHHHHHHHHHHHHhcCC
Confidence 74 34458999999998764
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-21 Score=189.13 Aligned_cols=235 Identities=16% Similarity=0.179 Sum_probs=157.5
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~ 111 (486)
..+++.+...+| .+.+.+|.|.. ..+.|+||++||++ ++...|..++..|+.. ||.|+++|+||+|.+...
T Consensus 47 ~~~~~~i~~~~g-~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~- 121 (311)
T 2c7b_A 47 ETRDVHIPVSGG-SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFP- 121 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTT-
T ss_pred eEEEEEecCCCC-cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCC-
Confidence 457788888888 89999999863 34579999999998 8888898899888876 999999999999987532
Q ss_pred CCCCcchHHHHHHHHHHHHhcC---CC--CcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccC----HHHHHH
Q 011425 112 VSLGWHEKDDLKVVVSYLRGNK---QT--SRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSD----LFDLML 177 (486)
Q Consensus 112 ~~~~~~~~~Dl~~~i~~l~~~~---~~--~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~----~~~~~~ 177 (486)
...+|+.++++|+.+.. +. ++++|+||||||.+++.+|...+ .++++|+++|..+ ......
T Consensus 122 -----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 196 (311)
T 2c7b_A 122 -----TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLV 196 (311)
T ss_dssp -----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHH
T ss_pred -----ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCc
Confidence 23688899999988753 23 68999999999999999998765 3999999999876 221111
Q ss_pred HHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch-hhhCCCCCCCEEEEEeCCCCCCCHHHH-HHHHHHcCCCcE
Q 011425 178 ELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC-LKLAPKTFIPALFGHASEDKFIRARHS-DLIFNAYAGDKN 255 (486)
Q Consensus 178 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~PvLii~G~~D~~vp~~~~-~~l~~~l~~~~~ 255 (486)
.... .. ...+.......+.................+ ...+..+. |+|+++|+.|.+++.... ...........+
T Consensus 197 ~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~ 272 (311)
T 2c7b_A 197 EFGV-AE--TTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKASGSRAV 272 (311)
T ss_dssp HHHH-CT--TCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEE
T ss_pred cHHH-hc--cCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHHCCCCEE
Confidence 1111 10 011111111112221111110000001111 11233443 999999999999864322 112223345788
Q ss_pred EEEeCC-CCCCC-------ChHHHHHHHHHHHHHhcC
Q 011425 256 IIKFDG-DHNSS-------RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 256 l~~~~g-gH~~~-------~p~~~~~~I~~FL~~~l~ 284 (486)
++++++ +|.+. .++++.+.+.+||.+.+.
T Consensus 273 ~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 273 AVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp EEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 999998 99754 247889999999998875
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=191.79 Aligned_cols=207 Identities=13% Similarity=0.050 Sum_probs=150.8
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW 116 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~ 116 (486)
..+...+|..+.+.+|.|.+ ++.|+|||+||++ ++...|..++..|+++||.|+++|+||+|.... .
T Consensus 41 ~~i~~~~~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~~------~ 110 (262)
T 2pbl_A 41 LNLSYGEGDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRI------S 110 (262)
T ss_dssp EEEESSSSTTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCH------H
T ss_pred cccccCCCCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCCh------H
Confidence 34444566667777888853 5789999999954 777888888889999999999999999875320 1
Q ss_pred chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC------CC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCc
Q 011425 117 HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPK 189 (486)
Q Consensus 117 ~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~------p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~ 189 (486)
..++|+.++++++..... .+++|+||||||.+++.+|..+ +. |+++|+++|..++............ ...
T Consensus 111 ~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~- 187 (262)
T 2pbl_A 111 EITQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEKF-KMD- 187 (262)
T ss_dssp HHHHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHHH-CCC-
T ss_pred HHHHHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhhhhhhh-CCC-
Confidence 237899999999988755 7999999999999999999887 55 9999999998764321111000000 000
Q ss_pred hhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--
Q 011425 190 FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-- 266 (486)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-- 266 (486)
. ......++...+..+++|+|+++|++|.+++++.+..+++.++ .+++++++ ||+..
T Consensus 188 ----------~--------~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~ 247 (262)
T 2pbl_A 188 ----------A--------DAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD--ADHVIAFEKHHFNVIE 247 (262)
T ss_dssp ----------H--------HHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT--CEEEEETTCCTTTTTG
T ss_pred ----------H--------HHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC--CeEEEeCCCCcchHHh
Confidence 0 0001113334566789999999999999999999999999997 78999998 99876
Q ss_pred ChHHHHHHHHHHH
Q 011425 267 RPQFYYDSVSIFF 279 (486)
Q Consensus 267 ~p~~~~~~I~~FL 279 (486)
.+......+.+++
T Consensus 248 ~~~~~~~~l~~~l 260 (262)
T 2pbl_A 248 PLADPESDLVAVI 260 (262)
T ss_dssp GGGCTTCHHHHHH
T ss_pred hcCCCCcHHHHHH
Confidence 3444445555544
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=189.70 Aligned_cols=209 Identities=14% Similarity=0.117 Sum_probs=133.3
Q ss_pred CCcEEEEeCCC--CCChhhHHHHHHHhccCCeEEEEEcCCCCCCCC-CCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 011425 65 PLPCVVYCHGN--SGCRADANEAAVILLPSNITLFTLDFSGSGLSD-GDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 65 ~~p~VV~lHG~--gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~-~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
..|+|||+||+ +++...|..++..|. .||.|+++|+||||.|+ ....... .+++.+.+..+.+..+.++++|+
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~~~~~---~~~~~~~l~~~l~~~~~~~~~lv 115 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPVSNQANVG---LRDWVNAILMIFEHFKFQSYLLC 115 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCCCCCTTCC---HHHHHHHHHHHHHHSCCSEEEEE
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCCCCccccc---HHHHHHHHHHHHHHhCCCCeEEE
Confidence 45899999955 566778888888887 59999999999999998 3332232 45555555555555567899999
Q ss_pred EEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH----------HHHHHHH--------------HHhhhCCchhHHHHH
Q 011425 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----------LMLELVD--------------VYKIRLPKFTVKMAV 196 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~----------~~~~~~~--------------~~~~~~p~~~~~~~~ 196 (486)
||||||.+++.+|..+|+ |+++|+++|...... ....... .....+.........
T Consensus 116 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (292)
T 3l80_A 116 VHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLW 195 (292)
T ss_dssp EETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred EEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhH
Confidence 999999999999999998 999999994331110 0000000 000001111001111
Q ss_pred HHH---HHHHhhhhc-------ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCC
Q 011425 197 QYM---RRVIQKKAK-------FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNS 265 (486)
Q Consensus 197 ~~~---~~~~~~~~~-------~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~ 265 (486)
... ...+..... ......+....+.. ++|+|+|+|++|.+++++ + .+++.+++.. +++++ ||+.
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~~~~--~~~~~~gH~~ 270 (292)
T 3l80_A 196 RGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHTQTK--LILCGQHHYL 270 (292)
T ss_dssp HHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCTTCE--EEECCSSSCH
T ss_pred HHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCCCce--eeeCCCCCcc
Confidence 111 111111111 00011112234556 899999999999999888 6 6666665544 55665 9986
Q ss_pred C--ChHHHHHHHHHHHHHh
Q 011425 266 S--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 266 ~--~p~~~~~~I~~FL~~~ 282 (486)
. .|+++.+.|.+||+++
T Consensus 271 ~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 271 HWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp HHHCHHHHHHHHHHHHHTC
T ss_pred hhhCHHHHHHHHHHHHHhc
Confidence 6 7999999999999865
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-21 Score=185.49 Aligned_cols=207 Identities=15% Similarity=0.165 Sum_probs=127.7
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCc--EEEEEE
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSR--IGLWGR 143 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~--i~LvGh 143 (486)
+|+|||+||++++...|..++..|.+.||+|+++|+||||.|+.... .. .+++.+.+..+.+..+.++ ++|+||
T Consensus 16 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~-~~---~~~~a~~l~~~l~~l~~~~~p~~lvGh 91 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHC-DN---FAEAVEMIEQTVQAHVTSEVPVILVGY 91 (264)
T ss_dssp BCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-----------CHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCCCc-cC---HHHHHHHHHHHHHHhCcCCCceEEEEE
Confidence 48999999999999999999999986689999999999999975321 22 2333333333333335555 999999
Q ss_pred cchHHHHHH---HHhcCCC-ccEEEEcCCccCH---HHHHH------HHHHHHh---------hh-----CCchhHHHHH
Q 011425 144 SMGAVTSLL---YGAEDPS-IAGMVLDSAFSDL---FDLML------ELVDVYK---------IR-----LPKFTVKMAV 196 (486)
Q Consensus 144 SmGG~lAl~---~A~~~p~-v~~lVl~sp~~~~---~~~~~------~~~~~~~---------~~-----~p~~~~~~~~ 196 (486)
||||.+++. +|..+|+ |+++|++++.... ..... .+...+. .. ..........
T Consensus 92 SmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1r3d_A 92 SLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQ 171 (264)
T ss_dssp THHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTCCHHHHH
T ss_pred CHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhhhhhhccCHHHHH
Confidence 999999999 8888998 9999998865321 11000 0000000 00 0000000000
Q ss_pred HHHHHHH-------hhh-hcccc-cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 011425 197 QYMRRVI-------QKK-AKFDI-MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 197 ~~~~~~~-------~~~-~~~~~-~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~ 266 (486)
.+..... ... ..... ...+....+.++++|+|+|+|++|..++ .+.+.+. ..++++++ ||..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~~--~~~~~i~~~gH~~~ 244 (264)
T 1r3d_A 172 TLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESSG--LSYSQVAQAGHNVH 244 (264)
T ss_dssp HHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHHC--SEEEEETTCCSCHH
T ss_pred HHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHhC--CcEEEcCCCCCchh
Confidence 1110000 000 00000 0112334566789999999999998642 2344443 56888887 99976
Q ss_pred --ChHHHHHHHHHHHHHhc
Q 011425 267 --RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 267 --~p~~~~~~I~~FL~~~l 283 (486)
.|+++.+.|.+|+.++.
T Consensus 245 ~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 245 HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHCHHHHHHHHHHHHHHHC
T ss_pred hcCHHHHHHHHHHHHHHhc
Confidence 79999999999998764
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-21 Score=212.91 Aligned_cols=231 Identities=18% Similarity=0.171 Sum_probs=167.4
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh---hhHH-HHHHHhc-cCCeEEEEEcCCCCCCCCCCC-
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR---ADAN-EAAVILL-PSNITLFTLDFSGSGLSDGDY- 111 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~---~~~~-~~~~~L~-~~Gy~Vv~~D~rG~G~S~~~~- 111 (486)
+.+.+ ..||..|.++++.|.+....++.|+||++||+++.. ..|. .+...|+ ++||.|+++|+||+|.+...+
T Consensus 475 ~~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~ 553 (740)
T 4a5s_A 475 KLDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIM 553 (740)
T ss_dssp EEEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHH
T ss_pred EEEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHH
Confidence 44555 789999999999998765567789999999998762 1221 2334455 589999999999999775322
Q ss_pred ----CCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHh
Q 011425 112 ----VSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYK 184 (486)
Q Consensus 112 ----~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~ 184 (486)
...+...++|+.++++++.+.... .+|+|+||||||++++.+|..+|+ ++++|+++|..+.......+...+.
T Consensus 554 ~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~ 633 (740)
T 4a5s_A 554 HAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYM 633 (740)
T ss_dssp GGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHHHH
T ss_pred HHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhHHHHHHc
Confidence 122223489999999999976432 789999999999999999999998 8999999998764321111111110
Q ss_pred hhCC--chhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCC-CEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEE
Q 011425 185 IRLP--KFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFI-PALFGHASEDKFIRARHSDLIFNAYA---GDKNIIK 258 (486)
Q Consensus 185 ~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~ 258 (486)
..| ..... .....++...+.++++ |+|++||+.|..|+++++..+++.+. ...++++
T Consensus 634 -~~p~~~~~~~----------------~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~ 696 (740)
T 4a5s_A 634 -GLPTPEDNLD----------------HYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMW 696 (740)
T ss_dssp -CCSSTTTTHH----------------HHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEE
T ss_pred -CCCCccccHH----------------HHHhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEE
Confidence 011 00000 0011234455667776 99999999999999999999988864 3568899
Q ss_pred eCC-CCCCC---ChHHHHHHHHHHHHHhcCCC
Q 011425 259 FDG-DHNSS---RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 259 ~~g-gH~~~---~p~~~~~~I~~FL~~~l~~~ 286 (486)
+++ +|... .++.+++.+.+||.+++...
T Consensus 697 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 697 YTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp ETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ECCCCCcCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 998 99984 56789999999999999754
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-21 Score=199.48 Aligned_cols=227 Identities=15% Similarity=0.151 Sum_probs=151.0
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSY 128 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~ 128 (486)
.+.+.+|.|.+ .++.|+||++||+++....+ ++..|+++||.|+++|+||+|.+...... ...+|+.+++++
T Consensus 144 ~l~~~l~~P~~---~~~~P~Vv~~hG~~~~~~~~--~a~~La~~Gy~V~a~D~rG~g~~~~~~~~---~~~~d~~~~~~~ 215 (422)
T 3k2i_A 144 RVRATLFLPPG---PGPFPGIIDIFGIGGGLLEY--RASLLAGHGFATLALAYYNFEDLPNNMDN---ISLEYFEEAVCY 215 (422)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCTTCSCCCH--HHHHHHTTTCEEEEEECSSSTTSCSSCSC---EETHHHHHHHHH
T ss_pred cEEEEEEcCCC---CCCcCEEEEEcCCCcchhHH--HHHHHHhCCCEEEEEccCCCCCCCCCccc---CCHHHHHHHHHH
Confidence 68889999963 46789999999998864433 57889999999999999999988755433 236899999999
Q ss_pred HHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHH-HHHH-HHHh
Q 011425 129 LRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAV-QYMR-RVIQ 204 (486)
Q Consensus 129 l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~-~~~~ 204 (486)
+.+.... .+|+|+||||||.+++.+|..+|+|+++|++++........... .....+........ .... ....
T Consensus 216 l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~v~a~V~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 292 (422)
T 3k2i_A 216 MLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAINY---KHSSIPPLGYDLRRIKVAFSGLVD 292 (422)
T ss_dssp HHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSSEEEEEEESCCSBCCSSCEEE---TTEEECCCCBCGGGCEECTTSCEE
T ss_pred HHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcCccEEEEEcCcccccCCchhh---cCCcCCCcccchhhcccCcchhHH
Confidence 9988653 79999999999999999999999999999988775211000000 00000000000000 0000 0000
Q ss_pred hhhcc----cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHH-HHHHHHcC---CC-cEEEEeCC-CCCCC--------
Q 011425 205 KKAKF----DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHS-DLIFNAYA---GD-KNIIKFDG-DHNSS-------- 266 (486)
Q Consensus 205 ~~~~~----~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~-~~l~~~l~---~~-~~l~~~~g-gH~~~-------- 266 (486)
....+ ..........+.++++|+|+|+|++|.++|.... ..+.+.+. .. .+++++++ ||...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~ 372 (422)
T 3k2i_A 293 IVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCP 372 (422)
T ss_dssp CTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCC
T ss_pred HHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcch
Confidence 00000 0000111223567889999999999999999855 46666543 23 78999997 99871
Q ss_pred ----------------------ChHHHHHHHHHHHHHhcCCC
Q 011425 267 ----------------------RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 267 ----------------------~p~~~~~~I~~FL~~~l~~~ 286 (486)
.++++++.+.+||.+++...
T Consensus 373 ~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 373 ASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp EEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred hhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 25678999999999999754
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=192.32 Aligned_cols=232 Identities=12% Similarity=0.087 Sum_probs=148.8
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh---------HHHHHH---HhccCCeEEEEEcCCC-CCCCCCCCC
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD---------ANEAAV---ILLPSNITLFTLDFSG-SGLSDGDYV 112 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~---------~~~~~~---~L~~~Gy~Vv~~D~rG-~G~S~~~~~ 112 (486)
+|..|.+..+-+. .....|+|||+||++++... |..++. .|+..||.|+++|+|| +|.|.+...
T Consensus 42 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 42 SYINVAYQTYGTL---NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CSEEEEEEEESCC---CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred cceeEEEEecccc---cccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcc
Confidence 4556776665332 11236899999999999888 777764 3767899999999999 688765421
Q ss_pred -------C----CCcchHHHHHHHHHHHHhcCCCCcEE-EEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH---HH
Q 011425 113 -------S----LGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD---LM 176 (486)
Q Consensus 113 -------~----~~~~~~~Dl~~~i~~l~~~~~~~~i~-LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~---~~ 176 (486)
. +.....+++.+.+..+.+..+..+++ |+||||||.+++.+|..+|+ |+++|++++...... ..
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 198 (377)
T 2b61_A 119 INPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGF 198 (377)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHH
T ss_pred cCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhH
Confidence 0 00123556666666555665778888 99999999999999999998 999999998654211 00
Q ss_pred HHHHHHHhhhCC-------------chhH--------------H---------------------HHHHHHHH----H--
Q 011425 177 LELVDVYKIRLP-------------KFTV--------------K---------------------MAVQYMRR----V-- 202 (486)
Q Consensus 177 ~~~~~~~~~~~p-------------~~~~--------------~---------------------~~~~~~~~----~-- 202 (486)
...........+ .... . ....+... .
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (377)
T 2b61_A 199 NHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLE 278 (377)
T ss_dssp HHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhcc
Confidence 000000000000 0000 0 00000000 0
Q ss_pred ----------Hhhhhcccc--cccchhhhCCCCCCCEEEEEeCCCCCCCH----HHHHHHHHHcCCCcEEEEeC-C-CCC
Q 011425 203 ----------IQKKAKFDI--MDLNCLKLAPKTFIPALFGHASEDKFIRA----RHSDLIFNAYAGDKNIIKFD-G-DHN 264 (486)
Q Consensus 203 ----------~~~~~~~~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~----~~~~~l~~~l~~~~~l~~~~-g-gH~ 264 (486)
......++. ...+....+.++++|+|+|+|++|.++|+ +.++.+.+.++ ..++++++ + ||+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~~gH~ 357 (377)
T 2b61_A 279 RFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGV-DLHFYEFPSDYGHD 357 (377)
T ss_dssp TCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-EEEEEEECCTTGGG
T ss_pred ccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCC-CceEEEeCCCCCch
Confidence 000000000 00122456778999999999999999999 77777777764 46788888 6 998
Q ss_pred CC--ChHHHHHHHHHHHHH
Q 011425 265 SS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 265 ~~--~p~~~~~~I~~FL~~ 281 (486)
.. .++++.+.|.+||.+
T Consensus 358 ~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 358 AFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHHHCHHHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHhc
Confidence 66 789999999999975
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.86 E-value=4e-22 Score=199.90 Aligned_cols=214 Identities=16% Similarity=0.168 Sum_probs=140.5
Q ss_pred CCCcEEEEeCCCCCChhhHH----------------HHHHHhccCCeEEEEEcCCCCCCCCCCCC-------CCCcch-H
Q 011425 64 TPLPCVVYCHGNSGCRADAN----------------EAAVILLPSNITLFTLDFSGSGLSDGDYV-------SLGWHE-K 119 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~----------------~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-------~~~~~~-~ 119 (486)
+..|+||++||++++...|. .++..|+++||.|+++|+||+|.|..... ...+.. +
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 127 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWI 127 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHH
Confidence 46789999999999988766 78889999999999999999999975432 222222 6
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH---HH--------HHHHHHHH----
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL---FD--------LMLELVDV---- 182 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~---~~--------~~~~~~~~---- 182 (486)
+|+.++++++.+..+.++++|+||||||.+++.+|..+ |+ |+++|++++.... .. ....+...
T Consensus 128 ~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (354)
T 2rau_A 128 SDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYV 207 (354)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcccc
Confidence 88999999988776778999999999999999999998 87 9999998653221 00 00001000
Q ss_pred ----------------HhhhCCch--hHHHHHHHHHH-HHh-------------------hhhcc-------cccccchh
Q 011425 183 ----------------YKIRLPKF--TVKMAVQYMRR-VIQ-------------------KKAKF-------DIMDLNCL 217 (486)
Q Consensus 183 ----------------~~~~~p~~--~~~~~~~~~~~-~~~-------------------~~~~~-------~~~~~~~~ 217 (486)
+....+.. .......++.. .+. ..... .....+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2rau_A 208 IPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLK 287 (354)
T ss_dssp EECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCC
T ss_pred cCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccc
Confidence 00000000 00000111110 000 00000 00012334
Q ss_pred hhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--C---hHHHHHHHHHHHHHh
Q 011425 218 KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--R---PQFYYDSVSIFFYNV 282 (486)
Q Consensus 218 ~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~---p~~~~~~I~~FL~~~ 282 (486)
..+.++++|+|+|+|++|.++|. .+ +.+....+++++++ ||... . ++++.+.|.+||.+.
T Consensus 288 ~~l~~i~~P~Lii~G~~D~~~p~-~~----~~l~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 288 FDYEGILVPTIAFVSERFGIQIF-DS----KILPSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp CCCTTCCCCEEEEEETTTHHHHB-CG----GGSCTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred cccccCCCCEEEEecCCCCCCcc-ch----hhhccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 56678999999999999987652 22 33345678999998 99753 3 489999999999864
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-21 Score=193.58 Aligned_cols=238 Identities=13% Similarity=0.036 Sum_probs=161.2
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChh--hHHHHHHHhccCCeEEEEEcCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRA--DANEAAVILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~--~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
+..+++.+...+|..|.+.+|.|.+. ..+.|+||++||++ ++.. .|..++..|++.||.|+++|+||+|.+.+
T Consensus 80 ~~~~~~~~~~~~g~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~ 157 (361)
T 1jkm_A 80 VETSTETILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEG 157 (361)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTE
T ss_pred ceeeeeeeecCCCCeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCC
Confidence 34567788888998999999999742 23679999999987 7777 78888889988899999999999976542
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcC---CCCcEEEEEEcchHHHHHHHHhc-----CC-CccEEEEcCCccCH--------
Q 011425 110 DYVSLGWHEKDDLKVVVSYLRGNK---QTSRIGLWGRSMGAVTSLLYGAE-----DP-SIAGMVLDSAFSDL-------- 172 (486)
Q Consensus 110 ~~~~~~~~~~~Dl~~~i~~l~~~~---~~~~i~LvGhSmGG~lAl~~A~~-----~p-~v~~lVl~sp~~~~-------- 172 (486)
... ......|+.++++|+.+.. +.++|+|+|||+||.+++.++.. .| .|+++|+++|..+.
T Consensus 158 ~~~--~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~ 235 (361)
T 1jkm_A 158 HHP--FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHER 235 (361)
T ss_dssp ECC--TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHH
T ss_pred CCC--CCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccccccccccc
Confidence 211 1123689999999998763 34599999999999999999988 78 59999999998765
Q ss_pred -HHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch----hhhCCCCCCCEEEEEeCCCCCCCHHHHHHHH
Q 011425 173 -FDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC----LKLAPKTFIPALFGHASEDKFIRARHSDLIF 247 (486)
Q Consensus 173 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~ 247 (486)
......+... ............+.................+ ...+..+. |+||++|+.|.+++ .+..++
T Consensus 236 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~ 309 (361)
T 1jkm_A 236 RLTELPSLVEN---DGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD--EGIAFA 309 (361)
T ss_dssp HHHHCTHHHHT---TTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHH
T ss_pred ccccCcchhhc---cCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--hHHHHH
Confidence 2111111111 1111111122222222111110000001111 23345565 99999999999987 566666
Q ss_pred HHcC---CCcEEEEeCC-CCCCC--------Ch-HHHHHHHHHHHHHh
Q 011425 248 NAYA---GDKNIIKFDG-DHNSS--------RP-QFYYDSVSIFFYNV 282 (486)
Q Consensus 248 ~~l~---~~~~l~~~~g-gH~~~--------~p-~~~~~~I~~FL~~~ 282 (486)
+.+. ..++++++++ +|... .. +++.+.+.+||.++
T Consensus 310 ~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 310 RRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 357 (361)
T ss_dssp HHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHh
Confidence 6553 4678999998 99754 12 67888999999875
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=207.37 Aligned_cols=241 Identities=15% Similarity=0.139 Sum_probs=168.8
Q ss_pred EcCCCcE--EEEEEEecCCCCCCCCCcEEEEeCCCCCChhh---------------------------------------
Q 011425 43 RNARGHV--LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--------------------------------------- 81 (486)
Q Consensus 43 ~~~dG~~--L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--------------------------------------- 81 (486)
...||.. |.+.+|+|.+ .++.|+||+.||+++....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 255 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKEL 255 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccc
Confidence 4679999 9999999974 3578999999999754111
Q ss_pred ---------H-----HHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcC--------------
Q 011425 82 ---------A-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK-------------- 133 (486)
Q Consensus 82 ---------~-----~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~-------------- 133 (486)
| ..+...|+++||.|+++|+||+|.|++.....+..+++|+.++|+|+..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q 335 (763)
T 1lns_A 256 PIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKA 335 (763)
T ss_dssp CEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECC
T ss_pred cccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhcccccccccccccccc
Confidence 1 124578889999999999999999998765555456899999999998431
Q ss_pred C--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHH-HHhhhCCch--------------h---H
Q 011425 134 Q--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD-VYKIRLPKF--------------T---V 192 (486)
Q Consensus 134 ~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~-~~~~~~p~~--------------~---~ 192 (486)
. .++|+++|+||||++++.+|+.+|+ ++++|+.++..+.......... ......+.. . .
T Consensus 336 ~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~ 415 (763)
T 1lns_A 336 SWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADF 415 (763)
T ss_dssp TTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHH
T ss_pred cCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcchh
Confidence 1 2689999999999999999999987 9999999988765442111000 000000000 0 0
Q ss_pred H----HHHHHHHHHHh----hhhcc--cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC--CcEEEEeC
Q 011425 193 K----MAVQYMRRVIQ----KKAKF--DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG--DKNIIKFD 260 (486)
Q Consensus 193 ~----~~~~~~~~~~~----~~~~~--~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~--~~~l~~~~ 260 (486)
. ....++..... ....+ .+...++...+.+|++|+|++||..|.++++..+.++++.++. .+.+++.+
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~ 495 (763)
T 1lns_A 416 LKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR 495 (763)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES
T ss_pred hhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeC
Confidence 0 00000111100 00000 0112245567788999999999999999999999999999974 56677777
Q ss_pred CCCCCC---ChHHHHHHHHHHHHHhcCCC
Q 011425 261 GDHNSS---RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 261 ggH~~~---~p~~~~~~I~~FL~~~l~~~ 286 (486)
+||... .+..+.+.+.+||+++|+..
T Consensus 496 ~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 496 GAHIYMNSWQSIDFSETINAYFVAKLLDR 524 (763)
T ss_dssp CSSCCCTTBSSCCHHHHHHHHHHHHHTTC
T ss_pred CcccCccccchHHHHHHHHHHHHHHhcCC
Confidence 799864 35678999999999999864
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-22 Score=195.31 Aligned_cols=239 Identities=13% Similarity=0.069 Sum_probs=134.7
Q ss_pred ccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCC--------CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcC
Q 011425 30 LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTP--------LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDF 101 (486)
Q Consensus 30 ~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~--------~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~ 101 (486)
+.+.....+++.|...++...... |+....+...+ .|+|||+||++++...|..++..|.+ ||.|+++|+
T Consensus 8 ~~~~~~~~~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lvllHG~~~~~~~~~~l~~~L~~-~~~v~~~D~ 85 (280)
T 3qmv_A 8 SSGVDLGTENLYFQSNALLSQRSA-WFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGD-EVAVVPVQL 85 (280)
T ss_dssp --------------------CHHH-HSCCCCCCCCCCCCCTTTCSEEEEEECCTTCCGGGGTTHHHHHCT-TEEEEECCC
T ss_pred ccccccCcceeeeecchhhhhcch-heecCCCCCcccccccCCCCceEEEECCCCCChHHHHHHHHhcCC-CceEEEEeC
Confidence 344555667788877766332211 22111112222 38899999999999999999999987 999999999
Q ss_pred CCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-cc----EEEEcCCccCH----
Q 011425 102 SGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IA----GMVLDSAFSDL---- 172 (486)
Q Consensus 102 rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~----~lVl~sp~~~~---- 172 (486)
||||.|.+......+ .+.+..+++.+......++++|+||||||.+|+.+|..+|+ +. ++++.++....
T Consensus 86 ~G~G~S~~~~~~~~~--~~~a~~~~~~l~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~ 163 (280)
T 3qmv_A 86 PGRGLRLRERPYDTM--EPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGD 163 (280)
T ss_dssp TTSGGGTTSCCCCSH--HHHHHHHHHHHHHTTCSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSC
T ss_pred CCCCCCCCCCCCCCH--HHHHHHHHHHHHHhCCCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCc
Confidence 999999766443332 22333334444443356899999999999999999998775 33 77776543211
Q ss_pred -------HHHHHHHHHHHhhhCCchhH-H----HHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 173 -------FDLMLELVDVYKIRLPKFTV-K----MAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 173 -------~~~~~~~~~~~~~~~p~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
...+......+......... . .....+...+.....+. ...+..+++|+|+|+|++|.++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~P~l~i~G~~D~~~~~ 237 (280)
T 3qmv_A 164 RADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYD------WHPRPPLDCPTTAFSAAADPIATP 237 (280)
T ss_dssp CCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCC------CCCCCCBCSCEEEEEEEECSSSCH
T ss_pred ccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhcc------ccCCCceecCeEEEEecCCCCcCh
Confidence 01111111111111000000 0 00001111111111111 112467899999999999999999
Q ss_pred HHHHHHHHHcCCCcEEEEeCCCCCCCC----hHHHHHHHHHH
Q 011425 241 RHSDLIFNAYAGDKNIIKFDGDHNSSR----PQFYYDSVSIF 278 (486)
Q Consensus 241 ~~~~~l~~~l~~~~~l~~~~ggH~~~~----p~~~~~~I~~F 278 (486)
+.+..+.+.++....++++++||+.+. ++++.+.|.+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~~~i~~~ 279 (280)
T 3qmv_A 238 EMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTE 279 (280)
T ss_dssp HHHHTTGGGBSSCEEEEEEEEETTGGGSSHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCceEEEEecCCCeEEcCchhHHHHHHHHHhh
Confidence 999988888877788888999999763 45566666555
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=206.06 Aligned_cols=237 Identities=14% Similarity=0.129 Sum_probs=173.2
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh--hHHHHH-HHhccCCeEEEEEcCCCCCCCCC
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAA-VILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~--~~~~~~-~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
..+..+.+.+++.||..|.++++.|.+...+++.|+||++||+.+... .|.... +.|+++||.|+++|+||+|....
T Consensus 445 ~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~ 524 (711)
T 4hvt_A 445 ENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGP 524 (711)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCH
T ss_pred ccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcch
Confidence 445778899999999999999999987655678999999999865432 233333 57888999999999999987753
Q ss_pred CCCC-----CCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHH----
Q 011425 110 DYVS-----LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML---- 177 (486)
Q Consensus 110 ~~~~-----~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~---- 177 (486)
.+.. ......+|+.+++++|.++... ++|+|+|+|+||++++.++..+|+ ++++|+.+|+.++.....
T Consensus 525 ~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~ 604 (711)
T 4hvt_A 525 EWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAG 604 (711)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTG
T ss_pred hHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccc
Confidence 2211 1223378999999999987443 689999999999999999999998 899999999887532110
Q ss_pred -HHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCC--CEEEEEeCCCCCCCHHHHHHHHHHc-C--
Q 011425 178 -ELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFI--PALFGHASEDKFIRARHSDLIFNAY-A-- 251 (486)
Q Consensus 178 -~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~--PvLii~G~~D~~vp~~~~~~l~~~l-~-- 251 (486)
.+...+. .|..+ ..... +...++...+.++++ |+||+||..|..||+.++.++++++ .
T Consensus 605 ~~~~~~~G--~p~~~--~~~~~------------l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~ 668 (711)
T 4hvt_A 605 HSWVTEYG--DPEIP--NDLLH------------IKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNP 668 (711)
T ss_dssp GGGHHHHC--CTTSH--HHHHH------------HHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCT
T ss_pred hHHHHHhC--CCcCH--HHHHH------------HHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHc
Confidence 0000000 01000 00000 112255667777877 9999999999999999999999998 4
Q ss_pred -CCcEEEEeCC-CCCCCC----hHHHHHHHHHHHHHhcCC
Q 011425 252 -GDKNIIKFDG-DHNSSR----PQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 252 -~~~~l~~~~g-gH~~~~----p~~~~~~I~~FL~~~l~~ 285 (486)
.+.+++++++ ||.... .......+.+||.+++..
T Consensus 669 g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 669 NTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp TCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCC
Confidence 4678888987 998652 345567788999998853
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-23 Score=202.65 Aligned_cols=226 Identities=14% Similarity=0.106 Sum_probs=142.0
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCC-----CCCCcc-h
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDY-----VSLGWH-E 118 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~-----~~~~~~-~ 118 (486)
.+|..+.+..+ +..|+|||+||++++...|..++..|. .||.|+++|+||||.|.... ...... .
T Consensus 12 ~~g~~~~~~~~--------g~~p~vv~lHG~~~~~~~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~ 82 (304)
T 3b12_A 12 VGDVTINCVVG--------GSGPALLLLHGFPQNLHMWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAM 82 (304)
Confidence 47877776543 356899999999999999999998888 69999999999999998652 222221 1
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH-------------------
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE------------------- 178 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~------------------- 178 (486)
++|+.++++.+ +.++++|+||||||.+++.+|..+|+ |+++|++++..........
T Consensus 83 ~~~l~~~l~~l----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
T 3b12_A 83 ASDQRELMRTL----GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAP 158 (304)
Confidence 45555555554 55789999999999999999999997 9999999886542211000
Q ss_pred HHHHHhh-----hCCc------------hhHHHHHHHHHHHHhh---hh---cccc-cccc----hhhhCCCCCCCEEEE
Q 011425 179 LVDVYKI-----RLPK------------FTVKMAVQYMRRVIQK---KA---KFDI-MDLN----CLKLAPKTFIPALFG 230 (486)
Q Consensus 179 ~~~~~~~-----~~p~------------~~~~~~~~~~~~~~~~---~~---~~~~-~~~~----~~~~l~~i~~PvLii 230 (486)
....... .... ........+....... .. .+.. ...+ ....+.++++|+|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 238 (304)
T 3b12_A 159 YPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVF 238 (304)
Confidence 0000000 0000 0000000000000000 00 0000 0001 111167889999999
Q ss_pred EeCCCCCC-CHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHHHhcC
Q 011425 231 HASEDKFI-RARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 231 ~G~~D~~v-p~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~~~l~ 284 (486)
+|++|.++ +......+.+.++. .+++++++||+.. .|+++.+.|.+||.+...
T Consensus 239 ~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 239 SGSAGLMHSLFEMQVVWAPRLAN-MRFASLPGGHFFVDRFPDDTARILREFLSDARS 294 (304)
Confidence 99999655 55555555555543 4555555599976 688999999999988754
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-20 Score=186.79 Aligned_cols=239 Identities=12% Similarity=0.090 Sum_probs=162.1
Q ss_pred ceeEEEEEEEcCCCc-EEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGH-VLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSD 108 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~-~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~ 108 (486)
.+..+++.+...+|. .|.+++|.|.. ..++.|+||++||++ ++...|..++..|+. .||.|+++|+||+|.+.
T Consensus 48 ~~~~~~~~i~~~~g~~~l~~~~~~P~~--~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~ 125 (323)
T 1lzl_A 48 GVSLRELSAPGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT 125 (323)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred CceEEEEEecCCCCCceeEEEEEecCC--CCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCC
Confidence 345688889888997 89999999964 235679999999998 888888888888887 49999999999999875
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhcC---CC--CcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccCHHHHHHH
Q 011425 109 GDYVSLGWHEKDDLKVVVSYLRGNK---QT--SRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLFDLMLE 178 (486)
Q Consensus 109 ~~~~~~~~~~~~Dl~~~i~~l~~~~---~~--~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~~~~~~~~ 178 (486)
.. ...+|+.++++|+.+.. +. .+++|+||||||.+++.++...+ .++++|+++|..+.......
T Consensus 126 ~~------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~ 199 (323)
T 1lzl_A 126 FP------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVS 199 (323)
T ss_dssp TT------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHH
T ss_pred CC------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchh
Confidence 32 23688999999997742 22 68999999999999999988753 39999999998764321111
Q ss_pred HHHHHhhhCCchhHHHHHHHHHHHHhhhhc-----ccccccchhhhCCCC--CCCEEEEEeCCCCCCCHHHHHHHHHHcC
Q 011425 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKKAK-----FDIMDLNCLKLAPKT--FIPALFGHASEDKFIRARHSDLIFNAYA 251 (486)
Q Consensus 179 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~i--~~PvLii~G~~D~~vp~~~~~~l~~~l~ 251 (486)
... +. ..+.+.......++...+..... .......+... ..+ .+|+||++|+.|.++ ..+..+++.+.
T Consensus 200 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~ 274 (323)
T 1lzl_A 200 MTN-FV-DTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDPLR--DEGIEYALRLL 274 (323)
T ss_dssp HHH-CS-SCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCTTH--HHHHHHHHHHH
T ss_pred HHH-hc-cCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCCch--HHHHHHHHHHH
Confidence 111 10 11112222222222222221110 00001111111 122 269999999999997 35555555543
Q ss_pred ---CCcEEEEeCC-CCCCC------ChHHHHHHHHHHHHHhcCC
Q 011425 252 ---GDKNIIKFDG-DHNSS------RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 252 ---~~~~l~~~~g-gH~~~------~p~~~~~~I~~FL~~~l~~ 285 (486)
..+++++++| +|.+. .++++.+.+.+||.+++..
T Consensus 275 ~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 318 (323)
T 1lzl_A 275 QAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318 (323)
T ss_dssp HTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred HcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhcc
Confidence 4688999998 99743 2568999999999998864
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-21 Score=198.67 Aligned_cols=233 Identities=14% Similarity=0.075 Sum_probs=146.0
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh---HHHHHH---HhccCCeEEEEEcCCC--CCCCCCC---CC-C-
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD---ANEAAV---ILLPSNITLFTLDFSG--SGLSDGD---YV-S- 113 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~---~~~~~~---~L~~~Gy~Vv~~D~rG--~G~S~~~---~~-~- 113 (486)
|..|.|..+-+. .....|+|||+||++++... |..++. .|...||.|+++|+|| +|.|... +. .
T Consensus 93 g~~l~y~~~G~~---~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~ 169 (444)
T 2vat_A 93 DVPVAYKSWGRM---NVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEG 169 (444)
T ss_dssp EEEEEEEEESCC---CTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC-
T ss_pred ceeEEEEEecCC---CCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccc
Confidence 334555555332 11236899999999999888 776664 4667799999999999 6887531 11 0
Q ss_pred ---C----CcchHHHHHHHHHHHHhcCCCCc-EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHH---HHH-
Q 011425 114 ---L----GWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML---ELV- 180 (486)
Q Consensus 114 ---~----~~~~~~Dl~~~i~~l~~~~~~~~-i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~---~~~- 180 (486)
+ ....++++.+.+..+.+..+.++ ++|+||||||++++.+|..+|+ |+++|++++......... ...
T Consensus 170 ~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~ 249 (444)
T 2vat_A 170 QRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQR 249 (444)
T ss_dssp -CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHH
Confidence 0 01123444444444444436678 9999999999999999999998 999999998764211100 000
Q ss_pred ------------------------------------------HHHhhhCC------------------------------
Q 011425 181 ------------------------------------------DVYKIRLP------------------------------ 188 (486)
Q Consensus 181 ------------------------------------------~~~~~~~p------------------------------ 188 (486)
..+.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
T 2vat_A 250 QCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQP 329 (444)
T ss_dssp HHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------C
T ss_pred HHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCc
Confidence 00000000
Q ss_pred chhHHHHHHHHHHHH-------------hhhhccccc---ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC
Q 011425 189 KFTVKMAVQYMRRVI-------------QKKAKFDIM---DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG 252 (486)
Q Consensus 189 ~~~~~~~~~~~~~~~-------------~~~~~~~~~---~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~ 252 (486)
.+............+ .....++.. ..+....+.++++|+|+|+|++|.+++++.++.+++.+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p~ 409 (444)
T 2vat_A 330 IEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPN 409 (444)
T ss_dssp GGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTT
T ss_pred hhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC
Confidence 000000000000000 000001000 0014456788999999999999999999999999999864
Q ss_pred CcEEEEeC-C-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 253 DKNIIKFD-G-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 253 ~~~l~~~~-g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
.++++++ + ||+.. .++++.+.|.+||.+++
T Consensus 410 -~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 410 -SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp -EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC--
T ss_pred -cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHhc
Confidence 6788888 5 99866 78999999999997654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=205.21 Aligned_cols=239 Identities=13% Similarity=0.082 Sum_probs=169.7
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC--hhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC--RADANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~--~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
..|..+.+.+.+.||..|.++++.|.+...+++.|+||++||+.+. ...|......|+++||.|+++|+||+|.....
T Consensus 421 ~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 500 (693)
T 3iuj_A 421 EDYVSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQA 500 (693)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHH
T ss_pred hhCeeEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHH
Confidence 3467788999999999999999999865556788999999998654 33355556788889999999999999876532
Q ss_pred CCCC-----CcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH----
Q 011425 111 YVSL-----GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE---- 178 (486)
Q Consensus 111 ~~~~-----~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~---- 178 (486)
+... .....+|+.+++++|.++... ++|+|+|||+||++++.++..+|+ ++++|+.+|+.++......
T Consensus 501 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 580 (693)
T 3iuj_A 501 WHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGT 580 (693)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGG
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCch
Confidence 2111 112368999999999987433 799999999999999999999998 9999999998875322100
Q ss_pred -HHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC-CCCC-EEEEEeCCCCCCCHHHHHHHHHHcC----
Q 011425 179 -LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK-TFIP-ALFGHASEDKFIRARHSDLIFNAYA---- 251 (486)
Q Consensus 179 -~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P-vLii~G~~D~~vp~~~~~~l~~~l~---- 251 (486)
+...+. .|.... ....+ +...++...+.. +++| +||++|..|..|++.++.++++.+.
T Consensus 581 ~~~~~~g--~p~~~~-~~~~~------------~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~ 645 (693)
T 3iuj_A 581 GWAYDYG--TSADSE-AMFDY------------LKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNA 645 (693)
T ss_dssp GCHHHHC--CTTSCH-HHHHH------------HHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCC
T ss_pred hHHHHcC--CccCHH-HHHHH------------HHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCC
Confidence 000000 000000 00001 112245567777 8898 9999999999999999999888764
Q ss_pred --CCcEEEEeCC-CCCCCC----hHHHHHHHHHHHHHhcCCC
Q 011425 252 --GDKNIIKFDG-DHNSSR----PQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 252 --~~~~l~~~~g-gH~~~~----p~~~~~~I~~FL~~~l~~~ 286 (486)
..+.++++++ ||.... ..+....+.+||.+++...
T Consensus 646 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 646 GPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMGYR 687 (693)
T ss_dssp SSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcCCC
Confidence 3567888887 998764 3467788999999998754
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=207.97 Aligned_cols=232 Identities=16% Similarity=0.170 Sum_probs=165.9
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh---hHH-HHHHHhc-cCCeEEEEEcCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA---DAN-EAAVILL-PSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~---~~~-~~~~~L~-~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
..+.+.+...+ ..|.+++|.|.+...+++.|+||++||+++... .|. .+...|+ ++||.|+++|+||+|.+...
T Consensus 467 ~~~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~ 545 (719)
T 1z68_A 467 KEEIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDK 545 (719)
T ss_dssp EEEEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHH
T ss_pred ceEEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchh
Confidence 34677888777 999999999986544567899999999987643 222 2444454 68999999999999998643
Q ss_pred CC-----CCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHH
Q 011425 111 YV-----SLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (486)
Q Consensus 111 ~~-----~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~ 182 (486)
+. ..+...++|+.++++++.+.... .+++|+||||||++++.+|..+|+ ++++|+++|..+.......+...
T Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~ 625 (719)
T 1z68_A 546 LLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTER 625 (719)
T ss_dssp HHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHHHH
T ss_pred hHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccccchh
Confidence 21 11223478999999999986432 689999999999999999999996 99999999987642211111111
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCC-CEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEE
Q 011425 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFI-PALFGHASEDKFIRARHSDLIFNAYA---GDKNIIK 258 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~ 258 (486)
+. ..+.... . ... ....++...+.++++ |+|++||+.|.++|++.+..+++.+. ...++++
T Consensus 626 ~~-g~~~~~~-~-~~~------------~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 690 (719)
T 1z68_A 626 FM-GLPTKDD-N-LEH------------YKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMW 690 (719)
T ss_dssp HH-CCSSTTT-T-HHH------------HHHTCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEE
T ss_pred hc-CCccccc-c-hhh------------hhhCCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEE
Confidence 10 0110000 0 000 011133345566777 89999999999999999999988764 3567899
Q ss_pred eCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 259 FDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 259 ~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
+++ ||... .++.+.+.+.+||.+++
T Consensus 691 ~~~~gH~~~~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 691 YSDQNHGLSGLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp ETTCCTTCCTHHHHHHHHHHHHHHHHHH
T ss_pred ECcCCCCCCcccHHHHHHHHHHHHHHhh
Confidence 998 99875 36789999999999876
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=212.02 Aligned_cols=228 Identities=16% Similarity=0.176 Sum_probs=166.6
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh---hhH--HHHHHHhccCCeEEEEEcCCCCCCCCC--
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR---ADA--NEAAVILLPSNITLFTLDFSGSGLSDG-- 109 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~---~~~--~~~~~~L~~~Gy~Vv~~D~rG~G~S~~-- 109 (486)
.+.+.+...|| .|.+++|.|.+....++.|+||++||+++.. ..| ......|+++||.|+++|+||+|.+..
T Consensus 468 ~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~ 546 (723)
T 1xfd_A 468 VEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKL 546 (723)
T ss_dssp CCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred ceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHH
Confidence 45677888899 9999999998654556789999999998763 222 234556777899999999999998531
Q ss_pred ---CCCCCCcchHHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcC----CC-ccEEEEcCCccCHHHHHHHH
Q 011425 110 ---DYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAED----PS-IAGMVLDSAFSDLFDLMLEL 179 (486)
Q Consensus 110 ---~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~----p~-v~~lVl~sp~~~~~~~~~~~ 179 (486)
.....+...++|+.++++++.++.. ..+++|+||||||++++.+|..+ |+ ++++|+++|..+.......
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~- 625 (723)
T 1xfd_A 547 LHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASA- 625 (723)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHH-
T ss_pred HHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhh-
Confidence 1112222347899999999988742 36899999999999999999999 77 9999999997753211000
Q ss_pred HHHHhhhCCchhHHHHHHHHHHHHhhh--hcccccccchhhhCCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHcC---CC
Q 011425 180 VDVYKIRLPKFTVKMAVQYMRRVIQKK--AKFDIMDLNCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYA---GD 253 (486)
Q Consensus 180 ~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~---~~ 253 (486)
+....+... ........++...+.+++ +|+|++||+.|.++|++.+..+++.+. ..
T Consensus 626 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 687 (723)
T 1xfd_A 626 ------------------FSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKAN 687 (723)
T ss_dssp ------------------HHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCC
T ss_pred ------------------ccHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCC
Confidence 000001000 000111223445677888 799999999999999999999988874 46
Q ss_pred cEEEEeCC-CCCCC---ChHHHHHHHHHHHHHhcC
Q 011425 254 KNIIKFDG-DHNSS---RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 254 ~~l~~~~g-gH~~~---~p~~~~~~I~~FL~~~l~ 284 (486)
.+++++++ ||... .++.+.+.+.+||.+++.
T Consensus 688 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 688 YSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp CEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred eEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 78999998 99974 467899999999988764
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=207.59 Aligned_cols=238 Identities=14% Similarity=0.151 Sum_probs=171.0
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh--hHHHHHHHhccCCeEEEEEcCCCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~--~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~ 111 (486)
.+..+.+.+.+.||..|.++++.|.+....++.|+||++||+.+... .|......|+++||.|+++|+||+|.+...+
T Consensus 414 ~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~ 493 (695)
T 2bkl_A 414 QYQVEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAW 493 (695)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred HCeEEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHH
Confidence 46678899999999999999999986545567899999999765543 3444555677889999999999998775321
Q ss_pred CC-----CCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHH-----H
Q 011425 112 VS-----LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML-----E 178 (486)
Q Consensus 112 ~~-----~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~-----~ 178 (486)
.. ......+|+.+++++|.++... .+++|+||||||++++.++..+|+ ++++|+.+|+.++..... .
T Consensus 494 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~ 573 (695)
T 2bkl_A 494 HDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRT 573 (695)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGG
T ss_pred HHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcc
Confidence 11 1112368999999999887533 689999999999999999999998 899999999876432110 0
Q ss_pred HHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCC--CCEEEEEeCCCCCCCHHHHHHHHHHcCC----
Q 011425 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF--IPALFGHASEDKFIRARHSDLIFNAYAG---- 252 (486)
Q Consensus 179 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~vp~~~~~~l~~~l~~---- 252 (486)
....+. .+... ..... +...++...+..++ +|+||++|..|..|++.++.++++.+..
T Consensus 574 ~~~~~g--~~~~~--~~~~~------------~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~ 637 (695)
T 2bkl_A 574 WIPEYG--TAEKP--EDFKT------------LHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGN 637 (695)
T ss_dssp GHHHHC--CTTSH--HHHHH------------HHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTC
T ss_pred hHHHhC--CCCCH--HHHHH------------HHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccC
Confidence 000000 01000 00000 01123445555555 6999999999999999999999988743
Q ss_pred --CcEEEEeCC-CCCCC----ChHHHHHHHHHHHHHhcCCCC
Q 011425 253 --DKNIIKFDG-DHNSS----RPQFYYDSVSIFFYNVLHPPQ 287 (486)
Q Consensus 253 --~~~l~~~~g-gH~~~----~p~~~~~~I~~FL~~~l~~~~ 287 (486)
...++++++ ||... ...++...+.+||.+++....
T Consensus 638 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 679 (695)
T 2bkl_A 638 PATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLDVQG 679 (695)
T ss_dssp CSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 578888887 99874 245678889999999987543
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=185.44 Aligned_cols=237 Identities=17% Similarity=0.189 Sum_probs=162.1
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~ 109 (486)
.+..+++.+.+.+| .|.+.+|.|.+ ...|+||++||++ ++...|..++..|+. .||.|+++|+|+.+....
T Consensus 60 ~~~~~~~~~~~~~g-~i~~~~~~p~~----~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~ 134 (326)
T 3ga7_A 60 SMTTRTCAVPTPYG-DVTTRLYSPQP----TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARY 134 (326)
T ss_dssp CCEEEEEEECCTTS-CEEEEEEESSS----SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCT
T ss_pred CcceEEEEeecCCC-CeEEEEEeCCC----CCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCC
Confidence 34558899999999 89999999963 3349999999998 888888888888888 799999999998765431
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhcCCC-------ccEEEEcCCccCHHHHHH
Q 011425 110 DYVSLGWHEKDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDPS-------IAGMVLDSAFSDLFDLML 177 (486)
Q Consensus 110 ~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~~p~-------v~~lVl~sp~~~~~~~~~ 177 (486)
. ..++|+.++++|+.+.. +.++|+|+|+|+||.+++.++...++ ++++|+++|+.+......
T Consensus 135 ~------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~ 208 (326)
T 3ga7_A 135 P------QAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVS 208 (326)
T ss_dssp T------HHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHH
T ss_pred C------cHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChh
Confidence 1 23689999999998863 23699999999999999999987542 889999998765332111
Q ss_pred HHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccc-hhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CC
Q 011425 178 ELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN-CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GD 253 (486)
Q Consensus 178 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~ 253 (486)
. ..+....+.........+....+............ ....+.....|+||++|+.|.+++ .+..+++.+. ..
T Consensus 209 ~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~ 284 (326)
T 3ga7_A 209 R--RLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLID--DSRLLHQTLQAHQQP 284 (326)
T ss_dssp H--HHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTHH--HHHHHHHHHHHTTCC
T ss_pred H--hhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCHH--HHHHHHHHHHHCCCc
Confidence 1 01111111222222222332222111110000001 112333456699999999999984 5566665553 46
Q ss_pred cEEEEeCC-CCCCC-------ChHHHHHHHHHHHHHhcCC
Q 011425 254 KNIIKFDG-DHNSS-------RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 254 ~~l~~~~g-gH~~~-------~p~~~~~~I~~FL~~~l~~ 285 (486)
+++++++| +|.+. ..+++.+.+.+||.+++..
T Consensus 285 ~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 285 CEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 78999998 89864 2478899999999998753
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.2e-21 Score=187.97 Aligned_cols=234 Identities=14% Similarity=0.137 Sum_probs=157.6
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCC---CCCChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHG---NSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG---~gg~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~ 111 (486)
..+++.+...+| .+.+++|.|.+. .++.|+||++|| ++++...|..++..|+.+ ||.|+++|+||+|.+...
T Consensus 47 ~~~~~~i~~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~- 122 (310)
T 2hm7_A 47 EVREFDMDLPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFP- 122 (310)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT-
T ss_pred eEEEEEeccCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCC-
Confidence 457788888888 999999999642 456899999999 678888888899999875 999999999999976421
Q ss_pred CCCCcchHHHHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccCHH--HHHHHH
Q 011425 112 VSLGWHEKDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLF--DLMLEL 179 (486)
Q Consensus 112 ~~~~~~~~~Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~~~--~~~~~~ 179 (486)
...+|+.++++|+.+... .++++|+||||||.+++.+|..++ .|+++|+++|..+.. ......
T Consensus 123 -----~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~ 197 (310)
T 2hm7_A 123 -----AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASI 197 (310)
T ss_dssp -----HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCHHH
T ss_pred -----ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCcch
Confidence 236899999999988642 368999999999999999998754 499999999876532 100000
Q ss_pred HHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchh--hhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCc
Q 011425 180 VDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCL--KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDK 254 (486)
Q Consensus 180 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~ 254 (486)
.. .. ..+.........+................++. ..+..+ .|+||++|+.|.++ ..+..+++.+. ..+
T Consensus 198 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l~~~g~~~ 272 (310)
T 2hm7_A 198 EE-NA-EGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEALNKAGVKV 272 (310)
T ss_dssp HH-TS-SSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCE
T ss_pred hh-cC-CCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHHHHHHCCCCE
Confidence 00 00 01111111111222221111110000011111 123333 39999999999997 45566666553 457
Q ss_pred EEEEeCC-CCCCC-------ChHHHHHHHHHHHHHhc
Q 011425 255 NIIKFDG-DHNSS-------RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 255 ~l~~~~g-gH~~~-------~p~~~~~~I~~FL~~~l 283 (486)
+++++++ +|.+. .++++.+.+.+||.+++
T Consensus 273 ~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 273 EIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp EEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 8999998 99643 34788999999998875
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.1e-20 Score=192.82 Aligned_cols=228 Identities=15% Similarity=0.146 Sum_probs=150.5
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSY 128 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~ 128 (486)
.|.+++|.|. +.++.|+||++||+++....+ .+..|+++||.|+++|+||+|.+...... ...+|+.+++++
T Consensus 160 ~l~~~l~~P~---~~~~~P~Vv~lhG~~~~~~~~--~a~~La~~Gy~Vla~D~rG~~~~~~~~~~---~~~~d~~~a~~~ 231 (446)
T 3hlk_A 160 RVRGTLFLPP---EPGPFPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPKTMET---LHLEYFEEAMNY 231 (446)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCSSCSCCCH--HHHHHHTTTCEEEEECCSSSTTSCSCCSE---EEHHHHHHHHHH
T ss_pred eEEEEEEeCC---CCCCCCEEEEECCCCcchhhH--HHHHHHhCCCEEEEeccCCCCCCCcchhh---CCHHHHHHHHHH
Confidence 5888999996 346789999999998864444 47889999999999999999987754332 237899999999
Q ss_pred HHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHH-HHHH-HHh
Q 011425 129 LRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQ-YMRR-VIQ 204 (486)
Q Consensus 129 l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~-~~~ 204 (486)
+.+.... .+|+|+||||||.+++.+|..+|+|+++|++++........... .....+......... .... ...
T Consensus 232 l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~v~a~V~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 308 (446)
T 3hlk_A 232 LLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLRY---KGETLPPVGVNRNRIKVTKDGYAD 308 (446)
T ss_dssp HHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSCEEEEEEESCCSBCCSSEEEE---TTEEECCCCBCGGGCEECSSSCEE
T ss_pred HHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCCceEEEEEcCcccccCCCccc---cCccCCccccchhccccccchHHH
Confidence 9988654 79999999999999999999999999999988865311000000 000000000000000 0000 000
Q ss_pred hhhcc----cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHH-HHHHHHcC---CC-cEEEEeCC-CCCCC--------
Q 011425 205 KKAKF----DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHS-DLIFNAYA---GD-KNIIKFDG-DHNSS-------- 266 (486)
Q Consensus 205 ~~~~~----~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~-~~l~~~l~---~~-~~l~~~~g-gH~~~-------- 266 (486)
....+ ..........+.++++|+|+++|++|.++|.... ..+.+.+. .. .+++++++ ||...
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~ 388 (446)
T 3hlk_A 309 IVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCR 388 (446)
T ss_dssp CTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTTCCCCC
T ss_pred HHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCCCCCCh
Confidence 00000 0000011122567889999999999999999543 56665543 33 78999997 99872
Q ss_pred ----------------------ChHHHHHHHHHHHHHhcCCCC
Q 011425 267 ----------------------RPQFYYDSVSIFFYNVLHPPQ 287 (486)
Q Consensus 267 ----------------------~p~~~~~~I~~FL~~~l~~~~ 287 (486)
.++++++.+.+||++++..+.
T Consensus 389 ~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~~ 431 (446)
T 3hlk_A 389 ASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHE 431 (446)
T ss_dssp BC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred hhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 156789999999999997653
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-20 Score=183.67 Aligned_cols=235 Identities=14% Similarity=0.084 Sum_probs=158.2
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPS-NITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~ 110 (486)
...+++.+...+| .|.+.+|.|.+ .++.|+|||+||++ ++...|..++..|+.. ||.|+++|+||+|.+...
T Consensus 63 ~~~~~~~i~~~~~-~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p 138 (323)
T 3ain_A 63 GKIEDITIPGSET-NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFP 138 (323)
T ss_dssp SEEEEEEEECSSS-EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred cEEEEEEecCCCC-eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCc
Confidence 3457888887777 89999999963 45689999999954 7788888888888864 999999999999987532
Q ss_pred CCCCCcchHHHHHHHHHHHHhcC----CCCcEEEEEEcchHHHHHHHHhcCCC-c---cEEEEcCCccCHHHHHHHHHHH
Q 011425 111 YVSLGWHEKDDLKVVVSYLRGNK----QTSRIGLWGRSMGAVTSLLYGAEDPS-I---AGMVLDSAFSDLFDLMLELVDV 182 (486)
Q Consensus 111 ~~~~~~~~~~Dl~~~i~~l~~~~----~~~~i~LvGhSmGG~lAl~~A~~~p~-v---~~lVl~sp~~~~~~~~~~~~~~ 182 (486)
..++|+.++++|+.+.. +.++++|+||||||.+|+.+|...++ + +++|+++|..+..........
T Consensus 139 ------~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~- 211 (323)
T 3ain_A 139 ------AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLYD- 211 (323)
T ss_dssp ------HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHHH-
T ss_pred ------chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHHH-
Confidence 23689999999998764 45799999999999999999988765 3 899999997653211111111
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccccccchhh-hCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEE
Q 011425 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLK-LAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIK 258 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~ 258 (486)
+. ..+.+.......+....+...........++.. .+..+ .|+||++|+.|.+++ .+..+++.+. ..+++++
T Consensus 212 ~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~~--~~~~~a~~l~~ag~~~~~~~ 287 (323)
T 3ain_A 212 NG-EGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPLRD--QGEAYANKLLQSGVQVTSVG 287 (323)
T ss_dssp HS-SSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEE
T ss_pred hc-cCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCccHH--HHHHHHHHHHHcCCCEEEEE
Confidence 00 111111112222222221111100000111111 22333 399999999999973 4455555543 4678999
Q ss_pred eCC-CCCCC-------ChHHHHHHHHHHHHHhcC
Q 011425 259 FDG-DHNSS-------RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 259 ~~g-gH~~~-------~p~~~~~~I~~FL~~~l~ 284 (486)
+++ +|.+. .++++.+.+.+||.+.+.
T Consensus 288 ~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 288 FNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp ETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 998 89855 247889999999998764
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=188.97 Aligned_cols=190 Identities=15% Similarity=0.120 Sum_probs=141.6
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH-------HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC-----
Q 011425 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-------EAAVILLPSNITLFTLDFSGSGLSDGDYVSLG----- 115 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~-------~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~----- 115 (486)
..+.+.++.|.. ..+++|||+||++.+...|. .++..|+++||.|+++|+||||.|........
T Consensus 48 ~~~~~~~~~p~~----~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~ 123 (328)
T 1qlw_A 48 DQMYVRYQIPQR----AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLG 123 (328)
T ss_dssp SCEEEEEEEETT----CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTT
T ss_pred eeEEEEEEccCC----CCCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccccccc
Confidence 346666777752 34588999999999998887 48889999999999999999999986532100
Q ss_pred -------------------------------cch-------HHH------------------HHHHHHHHHhcCCCCcEE
Q 011425 116 -------------------------------WHE-------KDD------------------LKVVVSYLRGNKQTSRIG 139 (486)
Q Consensus 116 -------------------------------~~~-------~~D------------------l~~~i~~l~~~~~~~~i~ 139 (486)
+.. .++ +.+.+..+.+.. ++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~~~ 201 (328)
T 1qlw_A 124 KAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL--DGTV 201 (328)
T ss_dssp SSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH--TSEE
T ss_pred ccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh--CCce
Confidence 000 111 334444444432 4899
Q ss_pred EEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhh
Q 011425 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLK 218 (486)
Q Consensus 140 LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (486)
|+||||||.+++.+|..+|+ |+++|+++|... .....
T Consensus 202 lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------------------------~~~~~ 239 (328)
T 1qlw_A 202 LLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------------------------PKPED 239 (328)
T ss_dssp EEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------------------------CCGGG
T ss_pred EEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------------------------CCHHH
Confidence 99999999999999999987 999999997641 00111
Q ss_pred hCCCCCCCEEEEEeCCCCCCCH-----HHHHHHHHHcC---CCcEEEEeCC-C-----CCCC--C-hHHHHHHHHHHHHH
Q 011425 219 LAPKTFIPALFGHASEDKFIRA-----RHSDLIFNAYA---GDKNIIKFDG-D-----HNSS--R-PQFYYDSVSIFFYN 281 (486)
Q Consensus 219 ~l~~i~~PvLii~G~~D~~vp~-----~~~~~l~~~l~---~~~~l~~~~g-g-----H~~~--~-p~~~~~~I~~FL~~ 281 (486)
....+++|+|+++|++|.++|+ +.++.+++.++ .+.+++++++ | |+.+ . ++++++.|.+||.+
T Consensus 240 ~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~ 319 (328)
T 1qlw_A 240 VKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGR 319 (328)
T ss_dssp CGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHH
T ss_pred HhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHh
Confidence 1223568999999999999996 88888888876 4788999983 4 9865 3 79999999999998
Q ss_pred hcCC
Q 011425 282 VLHP 285 (486)
Q Consensus 282 ~l~~ 285 (486)
.+..
T Consensus 320 ~~~~ 323 (328)
T 1qlw_A 320 NTAK 323 (328)
T ss_dssp TCC-
T ss_pred cccC
Confidence 8754
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=173.69 Aligned_cols=180 Identities=15% Similarity=0.114 Sum_probs=133.9
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhcc--CCeEEEEEcCCC-------------------CCCCCCCCCCCCc-chH
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLP--SNITLFTLDFSG-------------------SGLSDGDYVSLGW-HEK 119 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~--~Gy~Vv~~D~rG-------------------~G~S~~~~~~~~~-~~~ 119 (486)
..++.|+||++||++++...|..++..|.+ .||.|+++|+|| +|.+.... .... ..+
T Consensus 10 ~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~-~~~~~~~~ 88 (218)
T 1auo_A 10 AKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSIS-LEELEVSA 88 (218)
T ss_dssp SSCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEEC-HHHHHHHH
T ss_pred CCCCCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccc-hHHHHHHH
Confidence 346789999999999999999999999988 899999988763 33221110 0011 115
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEEEcchHHHHHHHHh-cCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHH
Q 011425 120 DDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGA-EDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAV 196 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~-~~~~i~LvGhSmGG~lAl~~A~-~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 196 (486)
+++..+++++.+.. +..+++|+||||||.+++.+|. .+|+ ++++|+++|+... ..++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~------------~~~~~------- 149 (218)
T 1auo_A 89 KMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT------------FGDEL------- 149 (218)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT------------CCTTC-------
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC------------chhhh-------
Confidence 56666677665521 2359999999999999999999 8887 9999999998753 00000
Q ss_pred HHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEeCCCCCCCChHHHHH
Q 011425 197 QYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDGDHNSSRPQFYYD 273 (486)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~~ggH~~~~p~~~~~ 273 (486)
.+ ....+++|+|+++|++|.+++++.++.+.+.++. ..+++++++||... .+..+
T Consensus 150 -----------~~---------~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~~gH~~~--~~~~~ 207 (218)
T 1auo_A 150 -----------EL---------SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVL--PQEIH 207 (218)
T ss_dssp -----------CC---------CHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCC--HHHHH
T ss_pred -----------hh---------hhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEecCCCccC--HHHHH
Confidence 00 0123568999999999999999999999998875 57888888899875 34567
Q ss_pred HHHHHHHHhc
Q 011425 274 SVSIFFYNVL 283 (486)
Q Consensus 274 ~I~~FL~~~l 283 (486)
.+.+||.+.+
T Consensus 208 ~~~~~l~~~l 217 (218)
T 1auo_A 208 DIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888888765
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=174.40 Aligned_cols=174 Identities=14% Similarity=0.091 Sum_probs=132.5
Q ss_pred CCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEc-------------CCCCCCCCCCCCCC-Cc-chHHHHHHHHH
Q 011425 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLD-------------FSGSGLSDGDYVSL-GW-HEKDDLKVVVS 127 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D-------------~rG~G~S~~~~~~~-~~-~~~~Dl~~~i~ 127 (486)
+++.| ||++||++++...|..++..|. .+|.|+++| ++|+|.+....... .. ..++++.++++
T Consensus 14 ~~~~p-vv~lHG~g~~~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (209)
T 3og9_A 14 KDLAP-LLLLHSTGGDEHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVS 91 (209)
T ss_dssp TTSCC-EEEECCTTCCTTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHHH
T ss_pred CCCCC-EEEEeCCCCCHHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHHH
Confidence 35678 9999999999999999999888 689999999 66776654221111 11 12455666666
Q ss_pred HHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHh
Q 011425 128 YLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQ 204 (486)
Q Consensus 128 ~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 204 (486)
.+....+. ++++|+||||||.+++.+|..+|+ ++++|++++....
T Consensus 92 ~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-------------------------------- 139 (209)
T 3og9_A 92 LLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLE-------------------------------- 139 (209)
T ss_dssp HHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCC--------------------------------
T ss_pred HHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCC--------------------------------
Confidence 66665555 799999999999999999999998 9999999986541
Q ss_pred hhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEeCCCCCCCChHHHHHHHHHHHHH
Q 011425 205 KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDGDHNSSRPQFYYDSVSIFFYN 281 (486)
Q Consensus 205 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~~ggH~~~~p~~~~~~I~~FL~~ 281 (486)
..........+|+|+++|++|.++|++.++.+++.+.. ..+++++++||... .+..+.+.+||.+
T Consensus 140 ----------~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~l~~ 207 (209)
T 3og9_A 140 ----------DFEQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESSLGHQLT--QEEVLAAKKWLTE 207 (209)
T ss_dssp ----------CCCCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECSSTTSCC--HHHHHHHHHHHHH
T ss_pred ----------cccccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcCCCCcCC--HHHHHHHHHHHHh
Confidence 00011235678999999999999999999988887752 46777888899875 4567888999986
Q ss_pred h
Q 011425 282 V 282 (486)
Q Consensus 282 ~ 282 (486)
.
T Consensus 208 ~ 208 (209)
T 3og9_A 208 T 208 (209)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=171.12 Aligned_cols=177 Identities=12% Similarity=0.096 Sum_probs=125.9
Q ss_pred CCcEEEEeCCCCCCh---hhHHH-HHHHhccC-CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcE
Q 011425 65 PLPCVVYCHGNSGCR---ADANE-AAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRI 138 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~---~~~~~-~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i 138 (486)
+.|+|||+||++++. ..|.. ++..|.+. ||.|+++|+||++.. ++...++.+.+..+. .++
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~-------------~~~~~~~~~~~~l~~~~~~ 69 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA-------------RESIWLPFMETELHCDEKT 69 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC-------------CHHHHHHHHHHTSCCCTTE
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc-------------cHHHHHHHHHHHhCcCCCE
Confidence 468999999999983 55666 77888887 999999999986421 123334444444466 899
Q ss_pred EEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhh
Q 011425 139 GLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLK 218 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (486)
+|+||||||.+++.+|..+| |+++|+++++............ .. + .......
T Consensus 70 ~lvG~S~Gg~ia~~~a~~~p-v~~lvl~~~~~~~~~~~~~~~~---~~----------------------~--~~~~~~~ 121 (194)
T 2qs9_A 70 IIIGHSSGAIAAMRYAETHR-VYAIVLVSAYTSDLGDENERAS---GY----------------------F--TRPWQWE 121 (194)
T ss_dssp EEEEETHHHHHHHHHHHHSC-CSEEEEESCCSSCTTCHHHHHT---ST----------------------T--SSCCCHH
T ss_pred EEEEcCcHHHHHHHHHHhCC-CCEEEEEcCCccccchhhhHHH---hh----------------------h--cccccHH
Confidence 99999999999999999999 9999999987642110000000 00 0 0000112
Q ss_pred hCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhcCC
Q 011425 219 LAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 219 ~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l~~ 285 (486)
.+..+.+|+|+++|++|.++|++.+..+.+.+ ..+++++++ ||+.. .|+.+. .+.+||++....
T Consensus 122 ~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~-~~~~fl~~~~~~ 188 (194)
T 2qs9_A 122 KIKANCPYIVQFGSTDDPFLPWKEQQEVADRL--ETKLHKFTDCGHFQNTEFHELIT-VVKSLLKVPALE 188 (194)
T ss_dssp HHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTSCSSCCHHHHH-HHHHHHTCCCCC
T ss_pred HHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc--CCeEEEeCCCCCccchhCHHHHH-HHHHHHHhhhhh
Confidence 22234579999999999999999999999988 568888987 99876 465555 455999876543
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=180.59 Aligned_cols=184 Identities=11% Similarity=0.069 Sum_probs=116.4
Q ss_pred CcEEEEeCCCCCChhhH--HHHHHHhccC--CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 011425 66 LPCVVYCHGNSGCRADA--NEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~--~~~~~~L~~~--Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
.|+|||+||++++...+ ..+.+.+... +|.|+++|+||+|.+. .+++...++.+ ..++++|+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~~----------~~~l~~~~~~~----~~~~i~l~ 67 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPAEA----------AEMLESIVMDK----AGQSIGIV 67 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHHHH----------HHHHHHHHHHH----TTSCEEEE
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHHHH----------HHHHHHHHHhc----CCCcEEEE
Confidence 38999999998887654 2344555543 5999999999998431 33333333333 56899999
Q ss_pred EEcchHHHHHHHHhcCCCc-cEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhC
Q 011425 142 GRSMGAVTSLLYGAEDPSI-AGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLA 220 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~v-~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (486)
|+||||.+|+.+|.+++.. ..++...++. ............................. ......+
T Consensus 68 G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 133 (202)
T 4fle_A 68 GSSLGGYFATWLSQRFSIPAVVVNPAVRPF---ELLSDYLGENQNPYTGQKYVLESRHIYDL-----------KAMQIEK 133 (202)
T ss_dssp EETHHHHHHHHHHHHTTCCEEEESCCSSHH---HHGGGGCEEEECTTTCCEEEECHHHHHHH-----------HTTCCSS
T ss_pred EEChhhHHHHHHHHHhcccchheeeccchH---HHHHHhhhhhccccccccccchHHHHHHH-----------Hhhhhhh
Confidence 9999999999999999974 3333332221 11100000000000000000000000000 0122345
Q ss_pred CCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHH
Q 011425 221 PKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYN 281 (486)
Q Consensus 221 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~ 281 (486)
.++++|+|+|||++|.+||++.+.++++ +.++++++| ||.+...+++.+.|.+||+-
T Consensus 134 ~~~~~P~LiihG~~D~~Vp~~~s~~l~~----~~~l~i~~g~~H~~~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 134 LESPDLLWLLQQTGDEVLDYRQAVAYYT----PCRQTVESGGNHAFVGFDHYFSPIVTFLGL 191 (202)
T ss_dssp CSCGGGEEEEEETTCSSSCHHHHHHHTT----TSEEEEESSCCTTCTTGGGGHHHHHHHHTC
T ss_pred hccCceEEEEEeCCCCCCCHHHHHHHhh----CCEEEEECCCCcCCCCHHHHHHHHHHHHhh
Confidence 6788999999999999999999887763 457888887 89877888999999999973
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-20 Score=204.73 Aligned_cols=237 Identities=13% Similarity=0.121 Sum_probs=170.4
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh--HHHHHHHhcc-CCeEEEEEcCCCCCCCCC
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLP-SNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~ 109 (486)
..+..+.+.+.+.||..|.++++.|.+....++.|+||++||+++.... |......|+. +||.|+++|+||+|.+..
T Consensus 433 ~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~ 512 (710)
T 2xdw_A 433 SDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGE 512 (710)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHH
T ss_pred cccEEEEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCCh
Confidence 3467788999999999999999999865455678999999998765432 4444456667 899999999999998743
Q ss_pred CCCC-----CCcchHHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH---
Q 011425 110 DYVS-----LGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE--- 178 (486)
Q Consensus 110 ~~~~-----~~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~--- 178 (486)
.+.. ......+|+.+++++|.++.. .++++|+||||||++++.++.++|+ ++++|+.+|+.++......
T Consensus 513 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~ 592 (710)
T 2xdw_A 513 TWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIG 592 (710)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTG
T ss_pred HHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCC
Confidence 2111 111236899999999988743 3689999999999999999999998 9999999998764321100
Q ss_pred --HHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCC-----CCCC-CEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 179 --LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP-----KTFI-PALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 179 --~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~i~~-PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
+...+. .+... .....+ ...++...+. .+++ |+||++|..|..|++.++.++++.+
T Consensus 593 ~~~~~~~g--~~~~~--~~~~~~------------~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l 656 (710)
T 2xdw_A 593 HAWTTDYG--CSDSK--QHFEWL------------IKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATL 656 (710)
T ss_dssp GGGHHHHC--CTTSH--HHHHHH------------HHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHH
T ss_pred hhHHHhCC--CCCCH--HHHHHH------------HHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHH
Confidence 000000 01000 000000 1123445555 6787 9999999999999999998888876
Q ss_pred C----------CCcEEEEeCC-CCCCCC----hHHHHHHHHHHHHHhcCC
Q 011425 251 A----------GDKNIIKFDG-DHNSSR----PQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 251 ~----------~~~~l~~~~g-gH~~~~----p~~~~~~I~~FL~~~l~~ 285 (486)
. ..++++++++ ||.... ..++...+.+||.+++..
T Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 657 QYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp HHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 3 3457888887 998763 247788999999998864
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.8e-20 Score=178.72 Aligned_cols=229 Identities=15% Similarity=0.203 Sum_probs=153.9
Q ss_pred EEEEEE-cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH---HHHHhccCCeEEEEEcCCCCCCCCCCCC-
Q 011425 38 QDLEIR-NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSDGDYV- 112 (486)
Q Consensus 38 ~~i~~~-~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~- 112 (486)
+.+.+. ..+|..+.+.+|+|.+....++.|+||++||++++...|.. +...+...||.|+++|.+++|.+.....
T Consensus 18 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~ 97 (280)
T 3i6y_A 18 KQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEG 97 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSS
T ss_pred EEEEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccc
Confidence 444554 46889999999999864445778999999999998887766 3455666799999999998876432111
Q ss_pred -----------CC---Cc----chHHH-HHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 113 -----------SL---GW----HEKDD-LKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 113 -----------~~---~~----~~~~D-l~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
.. .+ ..... +.+++.++.+.+.. ++++|+||||||++|+.+|..+|+ ++++|+++|...
T Consensus 98 ~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 98 YDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINN 177 (280)
T ss_dssp TTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCC
T ss_pred cccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccc
Confidence 00 00 11222 24666677666555 799999999999999999999998 999999999876
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC--CCCEEEEEeCCCCCCCHHH-HHHHHH
Q 011425 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT--FIPALFGHASEDKFIRARH-SDLIFN 248 (486)
Q Consensus 172 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~PvLii~G~~D~~vp~~~-~~~l~~ 248 (486)
...... ....+...+... .......++...+..+ .+|+|+++|+.|.+++.+. ++.+.+
T Consensus 178 ~~~~~~-----------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 239 (280)
T 3i6y_A 178 PVNCPW-----------------GQKAFTAYLGKD-TDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEA 239 (280)
T ss_dssp GGGSHH-----------------HHHHHHHHHCSC-GGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHH
T ss_pred cccCch-----------------HHHHHHHhcCCc-hHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHH
Confidence 432110 000011111110 0011112232333333 4899999999999998743 455554
Q ss_pred Hc---CCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 249 AY---AGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 249 ~l---~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
.+ ...++++++++ +|.......+.+.+++|+.+.+.
T Consensus 240 ~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 240 AASSNNYPLELRSHEGYDHSYYFIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHTTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCceEEEeCCCCccHHHHHHhHHHHHHHHHhhcc
Confidence 44 45678999999 99876566778888899988774
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-19 Score=179.46 Aligned_cols=212 Identities=17% Similarity=0.199 Sum_probs=132.1
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCC-CCCcch-HHHHHHHHHHHHhcCCC-CcEEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYV-SLGWHE-KDDLKVVVSYLRGNKQT-SRIGL 140 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~-~~~~~~-~~Dl~~~i~~l~~~~~~-~~i~L 140 (486)
..|+|||+||++++...|..++..|.+ .+|+|+++|+||||.|+.... ...+.. ++|+.++++.+.. +. .+++|
T Consensus 37 ~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~~l~~l~~--~~~~~~~l 114 (316)
T 3c5v_A 37 EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYG--DLPPPIML 114 (316)
T ss_dssp SSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHHHHHHHHHHT--TCCCCEEE
T ss_pred CCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHHHHhc--cCCCCeEE
Confidence 468999999999999999999988876 379999999999999975422 223222 6777777777742 23 68999
Q ss_pred EEEcchHHHHHHHHhc--CCCccEEEEcCCccCHHH-HHHHHHHHHhhh---CCchhH--HH------------HHHHHH
Q 011425 141 WGRSMGAVTSLLYGAE--DPSIAGMVLDSAFSDLFD-LMLELVDVYKIR---LPKFTV--KM------------AVQYMR 200 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~--~p~v~~lVl~sp~~~~~~-~~~~~~~~~~~~---~p~~~~--~~------------~~~~~~ 200 (486)
+||||||.+|+.+|.. +|+|+++|++++...... ............ ...... .. ....+.
T Consensus 115 vGhSmGG~ia~~~A~~~~~p~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (316)
T 3c5v_A 115 IGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMV 194 (316)
T ss_dssp EEETHHHHHHHHHHHTTCCTTEEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHHHHHHTTSCCCHHHHHHHHH
T ss_pred EEECHHHHHHHHHHhhccCCCcceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHHHhhhcccccchhhhhhhhh
Confidence 9999999999999985 567999999887532111 000000000000 000000 00 000000
Q ss_pred HHHhhh------------hccc-ccccc------------hhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcE
Q 011425 201 RVIQKK------------AKFD-IMDLN------------CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKN 255 (486)
Q Consensus 201 ~~~~~~------------~~~~-~~~~~------------~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~ 255 (486)
..+... ..+. ..... ....+..+++|+|+|+|+.|.+.+..... .+....+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~~~~~~~~~----~~~~~~~ 270 (316)
T 3c5v_A 195 GQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIG----QMQGKFQ 270 (316)
T ss_dssp HHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCCCCHHHHHH----HHTTCSE
T ss_pred HHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccccccHHHHH----hhCCcee
Confidence 000000 0000 00000 01122358899999999999875432222 2234568
Q ss_pred EEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 256 IIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 256 l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
++++++ ||+.+ .|+.+++.|.+||.+.
T Consensus 271 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 300 (316)
T 3c5v_A 271 MQVLPQCGHAVHEDAPDKVAEAVATFLIRH 300 (316)
T ss_dssp EEECCCCSSCHHHHSHHHHHHHHHHHHHHT
T ss_pred EEEcCCCCCcccccCHHHHHHHHHHHHHhc
Confidence 889987 99976 7999999999999764
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-20 Score=185.03 Aligned_cols=235 Identities=13% Similarity=0.058 Sum_probs=152.8
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCC--------------CCCCCcEEEEeCCCCC---Chhh--HHHHHHHhc-cCCe
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFP--------------EDTPLPCVVYCHGNSG---CRAD--ANEAAVILL-PSNI 94 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~--------------~~~~~p~VV~lHG~gg---~~~~--~~~~~~~L~-~~Gy 94 (486)
...+++.+.. +..+.+.+|.|.... ..++.|+||++||++. +... |..++..|+ +.||
T Consensus 70 v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~ 147 (351)
T 2zsh_A 70 VFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKC 147 (351)
T ss_dssp EEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTS
T ss_pred ceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCC
Confidence 3446777765 455777789997532 2356799999999653 3333 777888888 6799
Q ss_pred EEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcC------CCC-cEEEEEEcchHHHHHHHHhcCC----CccEE
Q 011425 95 TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK------QTS-RIGLWGRSMGAVTSLLYGAEDP----SIAGM 163 (486)
Q Consensus 95 ~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~------~~~-~i~LvGhSmGG~lAl~~A~~~p----~v~~l 163 (486)
.|+++|+||.+.+... ...+|+.++++|+.+.. +.+ +++|+||||||.+++.+|...+ .|+++
T Consensus 148 ~vv~~d~rg~~~~~~~------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~ 221 (351)
T 2zsh_A 148 VVVSVNYRRAPENPYP------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGN 221 (351)
T ss_dssp EEEEECCCCTTTSCTT------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEE
T ss_pred EEEEecCCCCCCCCCc------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEE
Confidence 9999999998765321 23689999999998752 346 9999999999999999998876 49999
Q ss_pred EEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch----hhhCCCCCC-CEEEEEeCCCCCC
Q 011425 164 VLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC----LKLAPKTFI-PALFGHASEDKFI 238 (486)
Q Consensus 164 Vl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~i~~-PvLii~G~~D~~v 238 (486)
|+++|+.............. ..+.........++...............+. ...+.++.+ |+|+++|++|.++
T Consensus 222 vl~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~ 299 (351)
T 2zsh_A 222 ILLNPMFGGNERTESEKSLD--GKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIR 299 (351)
T ss_dssp EEESCCCCCSSCCHHHHHHT--TTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCEEEEEEETTSTTH
T ss_pred EEECCccCCCcCChhhhhcC--CCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCCEEEEEcCCCcch
Confidence 99999865321111111100 1111111222222222221111111000111 234455566 9999999999998
Q ss_pred CHHHHHHHHHHcC---CCcEEEEeCC-CCCCC------ChHHHHHHHHHHHHH
Q 011425 239 RARHSDLIFNAYA---GDKNIIKFDG-DHNSS------RPQFYYDSVSIFFYN 281 (486)
Q Consensus 239 p~~~~~~l~~~l~---~~~~l~~~~g-gH~~~------~p~~~~~~I~~FL~~ 281 (486)
+ ....+++.+. ..++++++++ ||... .++++.+.|.+||.+
T Consensus 300 ~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 300 D--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp H--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred H--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 6 3445555443 4688999998 99765 367889999999974
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-19 Score=199.15 Aligned_cols=238 Identities=13% Similarity=0.104 Sum_probs=170.1
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh--hHHHHHHHhccCCeEEEEEcCCCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~--~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~ 111 (486)
.|..+.+.+.+.||..|.++++.|.+...+++.|+||++||+.+... .|......|+++||.|+++|+||+|.+...+
T Consensus 477 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~ 556 (751)
T 2xe4_A 477 NYKVERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAW 556 (751)
T ss_dssp GEEEEEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHH
T ss_pred ceEEEEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcch
Confidence 45678899999999999999999986544567899999999876543 3444556788899999999999999865332
Q ss_pred CC-C-----CcchHHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH----
Q 011425 112 VS-L-----GWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE---- 178 (486)
Q Consensus 112 ~~-~-----~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~---- 178 (486)
.. . .....+|+.+++++|.++.. .++|+|+|+|+||++++.++..+|+ ++++|+.+|+.++...+..
T Consensus 557 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 636 (751)
T 2xe4_A 557 YEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIP 636 (751)
T ss_dssp HHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTST
T ss_pred hhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcccCcc
Confidence 21 1 11347899999999988743 3799999999999999999999998 9999999999886543210
Q ss_pred -HHHHHhh-hCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCC-EEEEEeCCCCCCCHHHHHHHHHHcCC---
Q 011425 179 -LVDVYKI-RLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP-ALFGHASEDKFIRARHSDLIFNAYAG--- 252 (486)
Q Consensus 179 -~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~vp~~~~~~l~~~l~~--- 252 (486)
....+.. ..+. ....... +...++...+..+++| +||++|+.|..|++.++.++++++..
T Consensus 637 ~~~~~~~~~g~p~--~~~~~~~------------~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~ 702 (751)
T 2xe4_A 637 LTTGEWEEWGNPN--EYKYYDY------------MLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKT 702 (751)
T ss_dssp THHHHTTTTCCTT--SHHHHHH------------HHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCC
T ss_pred cchhhHHHcCCCC--CHHHHHH------------HHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCC
Confidence 0000000 0000 0000000 1122455667778897 99999999999999999999887742
Q ss_pred ---CcEEEEeCC-CCCCCCh--H--HHHHHHHHHHHHhcCC
Q 011425 253 ---DKNIIKFDG-DHNSSRP--Q--FYYDSVSIFFYNVLHP 285 (486)
Q Consensus 253 ---~~~l~~~~g-gH~~~~p--~--~~~~~I~~FL~~~l~~ 285 (486)
...+.++++ ||....+ . .....+.+||.+++..
T Consensus 703 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 703 DNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp SCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCC
Confidence 223445576 9987632 2 4455789999999864
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=176.04 Aligned_cols=179 Identities=17% Similarity=0.185 Sum_probs=134.0
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhcc--CCeEEEEEcCC-------------------CCCCCCCCCCCCCc-chH
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLP--SNITLFTLDFS-------------------GSGLSDGDYVSLGW-HEK 119 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~--~Gy~Vv~~D~r-------------------G~G~S~~~~~~~~~-~~~ 119 (486)
.+++.|+||++||++++...|..++..|++ .||.|+++|+| |+|.+... ..... ..+
T Consensus 20 ~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~-~~~~~~~~~ 98 (226)
T 3cn9_A 20 APNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAI-DEDQLNASA 98 (226)
T ss_dssp CTTCCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCB-CHHHHHHHH
T ss_pred CCCCCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccc-cchhHHHHH
Confidence 446789999999999999999999999987 89999998777 44433211 00011 114
Q ss_pred HHHHHHHHHHHhc-CCCCcEEEEEEcchHHHHHHHHh-cCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHH
Q 011425 120 DDLKVVVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGA-EDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAV 196 (486)
Q Consensus 120 ~Dl~~~i~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~-~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 196 (486)
+++..+++++.+. .+..+++|+||||||.+++.+|. .+|+ |+++|+++|+.......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~-------------------- 158 (226)
T 3cn9_A 99 DQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL-------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC--------------------
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh--------------------
Confidence 5566666666542 12369999999999999999999 8987 99999999976532100
Q ss_pred HHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEeCCCCCCCChHHHHH
Q 011425 197 QYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDGDHNSSRPQFYYD 273 (486)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~~ggH~~~~p~~~~~ 273 (486)
.. ....+++|+|+++|+.|.++|++.+..+++.+.. ..+++++++||... .+..+
T Consensus 159 ----------------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~~gH~~~--~~~~~ 216 (226)
T 3cn9_A 159 ----------------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYPMGHEVS--LEEIH 216 (226)
T ss_dssp ----------------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEESCCSSCC--HHHHH
T ss_pred ----------------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEecCCCCcc--hhhHH
Confidence 00 1135678999999999999999999999988864 67888888899875 44567
Q ss_pred HHHHHHHHhc
Q 011425 274 SVSIFFYNVL 283 (486)
Q Consensus 274 ~I~~FL~~~l 283 (486)
.+.+||.+++
T Consensus 217 ~i~~~l~~~l 226 (226)
T 3cn9_A 217 DIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 8999998764
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=180.41 Aligned_cols=227 Identities=14% Similarity=0.132 Sum_probs=152.6
Q ss_pred EEEEE-EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH---HHHHhccCCeEEEEEcCCCCCCCCCCC-C
Q 011425 38 QDLEI-RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSDGDY-V 112 (486)
Q Consensus 38 ~~i~~-~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~S~~~~-~ 112 (486)
+.+.+ ....|..+.+.+|+|.... .++.|+||++||++++...|.. +...+...||.|+++|+||+|.+.... .
T Consensus 16 ~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~ 94 (278)
T 3e4d_A 16 GVFSHQSETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELT 94 (278)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTT
T ss_pred EEEEEeccccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccc
Confidence 44555 4567899999999997532 5678999999999999888876 344555569999999999999885322 0
Q ss_pred ------------C-------CCcchHHH-HHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCc
Q 011425 113 ------------S-------LGWHEKDD-LKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (486)
Q Consensus 113 ------------~-------~~~~~~~D-l~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~ 169 (486)
. ......+. +.++++++.+.+.. ++++|+||||||.+++.+|..+|+ ++++|+++|.
T Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 174 (278)
T 3e4d_A 95 NWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPI 174 (278)
T ss_dssp CTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCC
T ss_pred cccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCc
Confidence 0 00011222 23577777776666 799999999999999999999998 9999999998
Q ss_pred cCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC--CCCCEEEEEeCCCCCCCHHH-HHHH
Q 011425 170 SDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIPALFGHASEDKFIRARH-SDLI 246 (486)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~-~~~l 246 (486)
.+.... + +..... ...+... .......++...+.. ..+|+|++||+.|.+++... +..+
T Consensus 175 ~~~~~~------------~-~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~ 236 (278)
T 3e4d_A 175 VAPSSA------------D-WSEPAL----EKYLGAD-RAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLF 236 (278)
T ss_dssp SCGGGC------------T-TTHHHH----HHHHCSC-GGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHH
T ss_pred ccccCC------------c-cchhhH----HHhcCCc-HHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHH
Confidence 763211 0 000001 1111100 001111122222222 44699999999999998632 4566
Q ss_pred HHHcC---CCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 011425 247 FNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 247 ~~~l~---~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l 283 (486)
.+.+. ...++++++| +|.......+.+.+++|+.+.|
T Consensus 237 ~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~~l 277 (278)
T 3e4d_A 237 EEAIKGTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERL 277 (278)
T ss_dssp HHHHTTSSCEEEEEEETTCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCceEEEeCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 66554 3568889998 9986655677888889988775
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=181.41 Aligned_cols=198 Identities=16% Similarity=0.162 Sum_probs=138.9
Q ss_pred CCCCcEEEEeCCCC-----CChhhHHHHHHHh----ccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcC
Q 011425 63 DTPLPCVVYCHGNS-----GCRADANEAAVIL----LPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK 133 (486)
Q Consensus 63 ~~~~p~VV~lHG~g-----g~~~~~~~~~~~L----~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~ 133 (486)
.++.|+|||+||++ ++...|..++..| ...||.|+++|+|+.+..... ..++|+.++++++.+..
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~------~~~~d~~~~~~~l~~~~ 111 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP------RNLYDAVSNITRLVKEK 111 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT------HHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCC------cHHHHHHHHHHHHHHhC
Confidence 45689999999965 4567788888888 678999999999987654311 33789999999998887
Q ss_pred CCCcEEEEEEcchHHHHHHHHhcC-----------------CC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 134 QTSRIGLWGRSMGAVTSLLYGAED-----------------PS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 134 ~~~~i~LvGhSmGG~lAl~~A~~~-----------------p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
+..+++|+||||||.+++.++..+ +. |+++|++++........... +.+
T Consensus 112 ~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~--------~~~----- 178 (273)
T 1vkh_A 112 GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEY--------PEY----- 178 (273)
T ss_dssp TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHC--------GGG-----
T ss_pred CcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhc--------ccH-----
Confidence 778999999999999999999885 44 99999999988765433211 000
Q ss_pred HHHHHHHHh-hhhccc--ccccch--hhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCC
Q 011425 196 VQYMRRVIQ-KKAKFD--IMDLNC--LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS 266 (486)
Q Consensus 196 ~~~~~~~~~-~~~~~~--~~~~~~--~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~ 266 (486)
..+....+. ....+. ...... ......+.+|+|+++|++|.++|++.+..+++.++ ...+++++++ ||...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~ 258 (273)
T 1vkh_A 179 DCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDV 258 (273)
T ss_dssp HHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGG
T ss_pred HHHHHHHhcccccchhhcccccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCccccc
Confidence 001111110 000000 000000 01122367899999999999999999999988875 3578888987 99865
Q ss_pred -ChHHHHHHHHHHH
Q 011425 267 -RPQFYYDSVSIFF 279 (486)
Q Consensus 267 -~p~~~~~~I~~FL 279 (486)
..+++.+.|.+||
T Consensus 259 ~~~~~~~~~i~~fl 272 (273)
T 1vkh_A 259 YKNGKVAKYIFDNI 272 (273)
T ss_dssp GGCHHHHHHHHHTC
T ss_pred ccChHHHHHHHHHc
Confidence 3377888887775
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-20 Score=186.10 Aligned_cols=239 Identities=15% Similarity=0.100 Sum_probs=150.7
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCC-CCCCCCcEEEEeCCCCC---Chh--hHHHHHHHhc-cCCeEEEEEcCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPF-PEDTPLPCVVYCHGNSG---CRA--DANEAAVILL-PSNITLFTLDFSGSGL 106 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~-~~~~~~p~VV~lHG~gg---~~~--~~~~~~~~L~-~~Gy~Vv~~D~rG~G~ 106 (486)
.+..+++.+.. +..+.+.+|.|... ..+++.|+|||+||++. +.. .|..++..|+ +.||.|+++|+||++.
T Consensus 52 ~v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~ 129 (338)
T 2o7r_A 52 PVLTKDLALNP--LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPE 129 (338)
T ss_dssp SEEEEEEEEET--TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTT
T ss_pred CEEEEEEEecC--CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCC
Confidence 35667888875 45567778888743 23467899999999873 222 3777888887 6799999999999876
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCC--------CCcEEEEEEcchHHHHHHHHhcCC---------CccEEEEcCCc
Q 011425 107 SDGDYVSLGWHEKDDLKVVVSYLRGNKQ--------TSRIGLWGRSMGAVTSLLYGAEDP---------SIAGMVLDSAF 169 (486)
Q Consensus 107 S~~~~~~~~~~~~~Dl~~~i~~l~~~~~--------~~~i~LvGhSmGG~lAl~~A~~~p---------~v~~lVl~sp~ 169 (486)
.... ...+|+.++++|+.+... ..+++|+||||||.+++.+|.++| .|+++|+++|+
T Consensus 130 ~~~~------~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~ 203 (338)
T 2o7r_A 130 HRLP------AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPG 203 (338)
T ss_dssp TCTT------HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCC
T ss_pred CCCc------hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCc
Confidence 5321 237899999999987632 278999999999999999998865 38999999987
Q ss_pred cCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccc---------hhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 170 SDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN---------CLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
............. ...+.........++...+...........+ ....+..+.+|+|+++|+.|.+++.
T Consensus 204 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~ 281 (338)
T 2o7r_A 204 FGGSKRTGSELRL--ANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMIDR 281 (338)
T ss_dssp CCCSSCCHHHHHT--TTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHHH
T ss_pred cCCCcCChhhhcc--CCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchHH
Confidence 6432111110000 0111111111112222111110000000000 1122233556999999999999873
Q ss_pred HHHHHHHHHc---CCCcEEEEeCC-CCCCC--Ch---HHHHHHHHHHHHHhcC
Q 011425 241 RHSDLIFNAY---AGDKNIIKFDG-DHNSS--RP---QFYYDSVSIFFYNVLH 284 (486)
Q Consensus 241 ~~~~~l~~~l---~~~~~l~~~~g-gH~~~--~p---~~~~~~I~~FL~~~l~ 284 (486)
...+++.+ ...++++++++ ||... .+ +++.+.|.+||.+++.
T Consensus 282 --~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 282 --QMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp --HHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred --HHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 34444443 34678889998 89754 44 7899999999987764
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.4e-20 Score=176.35 Aligned_cols=180 Identities=14% Similarity=0.163 Sum_probs=139.5
Q ss_pred EEEEecCCCCC-CCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHH
Q 011425 52 CSHYMPSPFPE-DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLR 130 (486)
Q Consensus 52 ~~~~~P~~~~~-~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~ 130 (486)
+.+|.|..... +++.|+|||+||++++...|..++..|+++||.|+++|+||.+ ...|+..+++++.
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s~------------~~~~~~~~~~~l~ 101 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAG------------TGREMLACLDYLV 101 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCCT------------TSHHHHHHHHHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCCc------------cHHHHHHHHHHHH
Confidence 66788864211 2367999999999999999999999999999999999999531 0245556666665
Q ss_pred hcC-----------CCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHH
Q 011425 131 GNK-----------QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYM 199 (486)
Q Consensus 131 ~~~-----------~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 199 (486)
+.. +.++++|+||||||.+++.+| ..+.|+++|+++|.... .+
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a-~~~~v~~~v~~~~~~~~--------------~~----------- 155 (258)
T 2fx5_A 102 RENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG-QDTRVRTTAPIQPYTLG--------------LG----------- 155 (258)
T ss_dssp HHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT-TSTTCCEEEEEEECCSS--------------TT-----------
T ss_pred hcccccccccccccCccceEEEEEChHHHHHHHhc-cCcCeEEEEEecCcccc--------------cc-----------
Confidence 431 226899999999999999988 44559999998875430 00
Q ss_pred HHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH-HHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHH
Q 011425 200 RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH-SDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSV 275 (486)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I 275 (486)
.....+..+++|+|+++|++|.++++.. +..+++......+++++++ ||+.. .++.+.+.+
T Consensus 156 ---------------~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i 220 (258)
T 2fx5_A 156 ---------------HDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPS 220 (258)
T ss_dssp ---------------CCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHH
T ss_pred ---------------cchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHH
Confidence 0013455788999999999999999986 8888888655688999998 99976 578999999
Q ss_pred HHHHHHhcC
Q 011425 276 SIFFYNVLH 284 (486)
Q Consensus 276 ~~FL~~~l~ 284 (486)
.+||+.++.
T Consensus 221 ~~fl~~~l~ 229 (258)
T 2fx5_A 221 TAWFRFQLM 229 (258)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998774
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-20 Score=177.46 Aligned_cols=176 Identities=18% Similarity=0.110 Sum_probs=136.3
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEE--cCCCCCCCCCCCC----CCCc----chHHHHHHHHHHHHhcC
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTL--DFSGSGLSDGDYV----SLGW----HEKDDLKVVVSYLRGNK 133 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~--D~rG~G~S~~~~~----~~~~----~~~~Dl~~~i~~l~~~~ 133 (486)
++.|+||++||++++...|..++..|+. +|.|+++ |++|+|.+..... .... ..++|+.++++++.+..
T Consensus 60 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 138 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHY 138 (251)
T ss_dssp TTSCEEEEECCTTCCHHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHhHHHHHHHhcCC-CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 5789999999999999999999999987 4999999 8999997753211 0111 12567777777776665
Q ss_pred CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhccccc
Q 011425 134 QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIM 212 (486)
Q Consensus 134 ~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 212 (486)
+..+++|+||||||.+++.+|..+|+ |+++|+++|......
T Consensus 139 ~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-------------------------------------- 180 (251)
T 2r8b_A 139 QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------------------- 180 (251)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC--------------------------------------
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc--------------------------------------
Confidence 66899999999999999999999997 999999998865210
Q ss_pred ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC--C-CcEEEEeCCCCCCCChHHHHHHHHHHHHHhcC
Q 011425 213 DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA--G-DKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 213 ~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~--~-~~~l~~~~ggH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
......+++|+|+++|++|.+++++.+..+++.++ + ..++++.++||... .+..+.+.+||.+++.
T Consensus 181 ----~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 181 ----KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIR--SGEIDAVRGFLAAYGG 249 (251)
T ss_dssp ----CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCC--HHHHHHHHHHHGGGC-
T ss_pred ----cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccC--HHHHHHHHHHHHHhcC
Confidence 01223467999999999999999999999999886 2 23334555699875 4456888999988774
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=206.60 Aligned_cols=235 Identities=15% Similarity=0.093 Sum_probs=164.7
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh--hHHHHHHHhccCCeEEEEEcCCCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~--~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~ 111 (486)
.+..+.+.+...||..|.++++.|.+. .++.|+||++||+++... .|......|+++||.|+++|+||+|.+...+
T Consensus 458 ~~~~~~~~~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~ 535 (741)
T 1yr2_A 458 DFRVEQVFYPSKDGTKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAW 535 (741)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTC--CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHH
T ss_pred HCEEEEEEEEcCCCCEEEEEEEecCCC--CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHH
Confidence 467788999999999999999999753 467899999999876543 3445566788899999999999999874222
Q ss_pred CCC-----CcchHHHHHHHHHHHHhcC--CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH-----
Q 011425 112 VSL-----GWHEKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE----- 178 (486)
Q Consensus 112 ~~~-----~~~~~~Dl~~~i~~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~----- 178 (486)
... .....+|+.+++++|.++. ..++++|+|+||||++++.++.++|+ ++++|+.+|+.++......
T Consensus 536 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~ 615 (741)
T 1yr2_A 536 HDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRY 615 (741)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGG
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCch
Confidence 111 1123789999999998874 23799999999999999999999998 9999999998764321000
Q ss_pred HHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC-CCC-CEEEEEeCCCCCCCHHHHHHHHHHcCC----
Q 011425 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK-TFI-PALFGHASEDKFIRARHSDLIFNAYAG---- 252 (486)
Q Consensus 179 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~-PvLii~G~~D~~vp~~~~~~l~~~l~~---- 252 (486)
+...+. .|.. . .... .+...++...+.. +++ |+||++|..|..|++.++.++++.+..
T Consensus 616 ~~~~~g--~~~~--~---~~~~---------~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~ 679 (741)
T 1yr2_A 616 WVDDYG--YPEK--E---ADWR---------VLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIG 679 (741)
T ss_dssp GHHHHC--CTTS--H---HHHH---------HHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCC
T ss_pred hHHHcC--CCCC--H---HHHH---------HHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcC
Confidence 000000 0000 0 0000 0112244556665 775 999999999999999999999887643
Q ss_pred --CcEEEEeCC-CCCCCC----hHHHHHHHHHHHHHhcCCC
Q 011425 253 --DKNIIKFDG-DHNSSR----PQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 253 --~~~l~~~~g-gH~~~~----p~~~~~~I~~FL~~~l~~~ 286 (486)
...++++++ ||.... ..++...+.+||.+++...
T Consensus 680 g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 720 (741)
T 1yr2_A 680 PKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFTGLT 720 (741)
T ss_dssp SSCEEEEEC---------CHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 467888887 998663 2478889999999998654
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-19 Score=197.17 Aligned_cols=251 Identities=14% Similarity=0.130 Sum_probs=169.4
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh-------hhHHH-HH---HHhccCCeEEEEEc
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-------ADANE-AA---VILLPSNITLFTLD 100 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~-------~~~~~-~~---~~L~~~Gy~Vv~~D 100 (486)
...|..+++.+...||..|.+++|.|.+ .++.|+||++||+++.. ..|.. +. +.|+++||.|+++|
T Consensus 20 ~~~~~~~~v~i~~~DG~~L~~~~~~P~~---~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D 96 (615)
T 1mpx_A 20 SNDYIKREVMIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 96 (615)
T ss_dssp TCSEEEEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred cCCCEEEEEEEECCCCCEEEEEEEeCCC---CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEEC
Confidence 3457778899999999999999999964 25679999999998753 12322 22 77889999999999
Q ss_pred CCCCCCCCCCCCCC-------Cc---chHHHHHHHHHHHHhc-CCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcC
Q 011425 101 FSGSGLSDGDYVSL-------GW---HEKDDLKVVVSYLRGN-KQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDS 167 (486)
Q Consensus 101 ~rG~G~S~~~~~~~-------~~---~~~~Dl~~~i~~l~~~-~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~s 167 (486)
+||+|.|.+..... .. .+++|+.++++|+.++ ... .+|+++|+||||++++.+|...+. ++++|+++
T Consensus 97 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~ 176 (615)
T 1mpx_A 97 VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPES 176 (615)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEES
T ss_pred CCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecC
Confidence 99999998765443 11 5689999999999987 322 599999999999999999987766 99999999
Q ss_pred CccCHHH--H--------H--HHHHHHHhhh--C----C---chhHHH---------H--------HHHHHHHHhhhh-c
Q 011425 168 AFSDLFD--L--------M--LELVDVYKIR--L----P---KFTVKM---------A--------VQYMRRVIQKKA-K 208 (486)
Q Consensus 168 p~~~~~~--~--------~--~~~~~~~~~~--~----p---~~~~~~---------~--------~~~~~~~~~~~~-~ 208 (486)
+..++.. . + ..+...+... . + .-.... . ..++...+.... .
T Consensus 177 ~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 256 (615)
T 1mpx_A 177 PMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYD 256 (615)
T ss_dssp CCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSC
T ss_pred CccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCcC
Confidence 8877321 0 0 0000000000 0 0 000000 0 001111111000 0
Q ss_pred ccccccchhhhCCC--CCCCEEEEEeCCCCCCCHHHHHHHHHHcCC------CcEEEEeCCCCCCCC-------------
Q 011425 209 FDIMDLNCLKLAPK--TFIPALFGHASEDKFIRARHSDLIFNAYAG------DKNIIKFDGDHNSSR------------- 267 (486)
Q Consensus 209 ~~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~~~~l~~~l~~------~~~l~~~~ggH~~~~------------- 267 (486)
-.+...++...+.+ |++|+|+|||..|.. +...+.++++.+.. ...+++.+++|..+.
T Consensus 257 ~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~~H~~~~~~~~~~~~~~f~~ 335 (615)
T 1mpx_A 257 AFWQEQALDKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPWRHSQVNYDGSALGALNFEG 335 (615)
T ss_dssp HHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESCCTTGGGSCCSEETTEECSS
T ss_pred hhhhhcChhhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCCCCCCccccccccCccccCc
Confidence 00112355666778 999999999999997 77777777877752 267888888996410
Q ss_pred h---HHHHHHHHHHHHHhcCCC
Q 011425 268 P---QFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 268 p---~~~~~~I~~FL~~~l~~~ 286 (486)
. ....+.+.+||+.+|+..
T Consensus 336 ~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 336 DTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp CHHHHHHHHTHHHHHHHHHSTT
T ss_pred ccchhhhhhHHHHHHHHHhcCC
Confidence 0 112577899999999865
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-21 Score=190.07 Aligned_cols=210 Identities=11% Similarity=-0.033 Sum_probs=138.5
Q ss_pred CCCCcEEEEeCCCCCChhhHHHHHHHhccC--CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEE
Q 011425 63 DTPLPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGL 140 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~--Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~L 140 (486)
.+..|+|||+||++++...|..++..|.++ ||.|+++|+||||.|..... ..++++.+.+..+.+.. ..+++|
T Consensus 33 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~----~~~~~~~~~l~~~~~~~-~~~~~l 107 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW----EQVQGFREAVVPIMAKA-PQGVHL 107 (302)
T ss_dssp --CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH----HHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred cCCCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhHH----HHHHHHHHHHHHHhhcC-CCcEEE
Confidence 356789999999999999999999999988 89999999999999875421 23566666666665554 589999
Q ss_pred EEEcchHHHHHHHHhcCCC--ccEEEEcCCccCHH----HHHHH--------HHHHHh-hh-----CCc----hhHHHHH
Q 011425 141 WGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLF----DLMLE--------LVDVYK-IR-----LPK----FTVKMAV 196 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~~p~--v~~lVl~sp~~~~~----~~~~~--------~~~~~~-~~-----~p~----~~~~~~~ 196 (486)
+||||||.+++.+|..+|+ |+++|+++++.... ..... ...... .. .+. ... ...
T Consensus 108 vGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (302)
T 1pja_A 108 ICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPH-HDD 186 (302)
T ss_dssp EEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGGBCCTT-CHH
T ss_pred EEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhcccChh-hhh
Confidence 9999999999999999986 99999998764321 11100 000000 00 000 000 000
Q ss_pred HHHHH--HHhhhhcc-c-ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---------------------
Q 011425 197 QYMRR--VIQKKAKF-D-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA--------------------- 251 (486)
Q Consensus 197 ~~~~~--~~~~~~~~-~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~--------------------- 251 (486)
.+... ........ . ....+....+.+++ |+|+|+|++|.+++++.+..+.+..+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (302)
T 1pja_A 187 LYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLK 265 (302)
T ss_dssp HHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHH
T ss_pred hhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhhhchh
Confidence 00000 00000000 0 00011245677889 99999999999999887776643322
Q ss_pred -----CCcEEEEeCC-CCCCC--ChHHHHHHHHHHH
Q 011425 252 -----GDKNIIKFDG-DHNSS--RPQFYYDSVSIFF 279 (486)
Q Consensus 252 -----~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL 279 (486)
+..+++++++ ||+.. .|+.+.+.|.+||
T Consensus 266 ~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 266 TLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp HHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred hHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 1278899998 99976 6888988888876
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-19 Score=181.97 Aligned_cols=240 Identities=13% Similarity=0.072 Sum_probs=152.2
Q ss_pred eeEEEEEEEcCCCcEEEEEEEe-cCCC--------------------CCCCCCcEEEEeCCCCC---Ch--hhHHHHHHH
Q 011425 35 YKRQDLEIRNARGHVLQCSHYM-PSPF--------------------PEDTPLPCVVYCHGNSG---CR--ADANEAAVI 88 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~-P~~~--------------------~~~~~~p~VV~lHG~gg---~~--~~~~~~~~~ 88 (486)
+..+++.+...+| +.+.+|+ |... +..++.|+||++||++. +. ..|..++..
T Consensus 62 v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~ 139 (365)
T 3ebl_A 62 VSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRR 139 (365)
T ss_dssp EEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHH
T ss_pred CceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHH
Confidence 4458899998888 7777887 8642 13356799999999863 22 236778888
Q ss_pred hccC-CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcC------CCC-cEEEEEEcchHHHHHHHHhcCC--
Q 011425 89 LLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK------QTS-RIGLWGRSMGAVTSLLYGAEDP-- 158 (486)
Q Consensus 89 L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~------~~~-~i~LvGhSmGG~lAl~~A~~~p-- 158 (486)
|+.+ ||.|+++|||+.+..... ..++|+.++++|+.+.. +.+ +|+|+|+||||++|+.+|...+
T Consensus 140 la~~~g~~Vv~~dyR~~p~~~~~------~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~ 213 (365)
T 3ebl_A 140 FVKLSKGVVVSVNYRRAPEHRYP------CAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE 213 (365)
T ss_dssp HHHHHTSEEEEECCCCTTTSCTT------HHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEEeeCCCCCCCCCc------HHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhc
Confidence 8876 999999999976543211 23799999999998642 235 8999999999999999988643
Q ss_pred --CccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhh-hCCCCC----CCEEEEE
Q 011425 159 --SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLK-LAPKTF----IPALFGH 231 (486)
Q Consensus 159 --~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~----~PvLii~ 231 (486)
.++++|+++|+.+............ ..+.........++...+...........++.. ....+. .|+||++
T Consensus 214 ~~~~~g~vl~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~pP~Li~~ 291 (365)
T 3ebl_A 214 GVKVCGNILLNAMFGGTERTESERRLD--GKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIV 291 (365)
T ss_dssp TCCCCEEEEESCCCCCSSCCHHHHHHT--TTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCCTTSCCCCEEEEE
T ss_pred CCceeeEEEEccccCCCcCChhhhhcC--CCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhccCCCCCEEEEE
Confidence 3999999999876422111111100 111112222222222222111111111111111 122333 4899999
Q ss_pred eCCCCCCCHHHHHHHHHHc---CCCcEEEEeCC-CCCCC------ChHHHHHHHHHHHHHhcCCC
Q 011425 232 ASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHNSS------RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 232 G~~D~~vp~~~~~~l~~~l---~~~~~l~~~~g-gH~~~------~p~~~~~~I~~FL~~~l~~~ 286 (486)
|+.|.+++. ...+++.+ ...+++++++| +|.+. ..+++++.|.+||+++++..
T Consensus 292 G~~D~l~~~--~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 354 (365)
T 3ebl_A 292 SGLDLTCDR--QLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYG 354 (365)
T ss_dssp ETTSTTHHH--HHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC--
T ss_pred cCcccchhH--HHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence 999977653 34554443 45788999998 89743 35689999999999998754
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-20 Score=174.81 Aligned_cols=174 Identities=13% Similarity=0.138 Sum_probs=134.5
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEE--cCCCCCCCCCCCC----CCCcc----hHHHHHHHHHHHHhcC
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTL--DFSGSGLSDGDYV----SLGWH----EKDDLKVVVSYLRGNK 133 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~--D~rG~G~S~~~~~----~~~~~----~~~Dl~~~i~~l~~~~ 133 (486)
++.|+||++||++++...|..++..|++ ||.|+++ |++|+|.+..... ..... .+.++.++++++.+..
T Consensus 36 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 114 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNELDLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEY 114 (226)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEEecCCCChhHHHHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhc
Confidence 4789999999999999999999999988 9999999 9999997752110 01111 1344555666666665
Q ss_pred C--CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhccc
Q 011425 134 Q--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFD 210 (486)
Q Consensus 134 ~--~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 210 (486)
+ ..+++|+||||||.+++.+|..+|+ |+++|+++|......
T Consensus 115 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------------ 158 (226)
T 2h1i_A 115 KFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------------------ 158 (226)
T ss_dssp TCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS------------------------------------
T ss_pred CCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc------------------------------------
Confidence 3 3899999999999999999999997 999999998864210
Q ss_pred ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 011425 211 IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 211 ~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l 283 (486)
......+++|+++++|+.|.+++++.+..+++.++. ..++ ++++ ||... .+..+.+.+||.+.+
T Consensus 159 ------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~--~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 ------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT--MGEVEKAKEWYDKAF 226 (226)
T ss_dssp ------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC--HHHHHHHHHHHHHHC
T ss_pred ------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC--HHHHHHHHHHHHHhC
Confidence 012234578999999999999999999999988863 3455 7776 99875 567788999998764
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=174.79 Aligned_cols=228 Identities=12% Similarity=0.160 Sum_probs=148.2
Q ss_pred EEEEE-EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHH---HHHhccCCeEEEEEcC--CCCCCCCCC-
Q 011425 38 QDLEI-RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA---AVILLPSNITLFTLDF--SGSGLSDGD- 110 (486)
Q Consensus 38 ~~i~~-~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~---~~~L~~~Gy~Vv~~D~--rG~G~S~~~- 110 (486)
+.+.+ ....|..+.+.+|+|.+.. .++.|+||++||++++...|... ...++..||.|+++|+ ||+|.+...
T Consensus 17 ~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~ 95 (282)
T 3fcx_A 17 KVFEHDSVELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDE 95 (282)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC-----
T ss_pred EEEEEEchhcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccc
Confidence 33444 3567899999999997532 35789999999999998888665 5777788999999999 776654321
Q ss_pred ----------CCCCC---c----chHH-HHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCc
Q 011425 111 ----------YVSLG---W----HEKD-DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (486)
Q Consensus 111 ----------~~~~~---~----~~~~-Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~ 169 (486)
+.... + .... .+.+++.++.+.+.. ++++|+||||||.+|+.+|..+|+ ++++|+++|.
T Consensus 96 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~ 175 (282)
T 3fcx_A 96 SWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPI 175 (282)
T ss_dssp ---CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCC
T ss_pred cccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCc
Confidence 11111 0 1122 334666677655544 689999999999999999999998 8999999998
Q ss_pred cCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch---hhhCCCCCCCEEEEEeCCCCCCCHHH--HH
Q 011425 170 SDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC---LKLAPKTFIPALFGHASEDKFIRARH--SD 244 (486)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~i~~PvLii~G~~D~~vp~~~--~~ 244 (486)
.+....... ...+...+... .......++ ...+..+.+|+|+++|+.|.++|... ++
T Consensus 176 ~~~~~~~~~-----------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~ 237 (282)
T 3fcx_A 176 CNPVLCPWG-----------------KKAFSGYLGTD-QSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPD 237 (282)
T ss_dssp CCGGGSHHH-----------------HHHHHHHHC----CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHH
T ss_pred cCcccCchh-----------------HHHHHHhcCCc-hhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHH
Confidence 764321100 00011111110 001111122 23344558999999999999985443 22
Q ss_pred HHHH---HcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 245 LIFN---AYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 245 ~l~~---~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
.+.+ ......+++++++ +|.......+......|+.+++.
T Consensus 238 ~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 238 NFIAACTEKKIPVVFRLQEDYDHSYYFIATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCceEEEECCCCCcCHHHHHhhhHHHHHHHHHhhc
Confidence 3333 3345678999999 99876666777888888888764
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=182.15 Aligned_cols=232 Identities=16% Similarity=0.137 Sum_probs=156.2
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~ 110 (486)
+..+++.+...+|..|.+++|.|.+ ++.|+||++||+| ++...+..++..|+. .||.|+++|||+.+.....
T Consensus 58 ~~~~~~~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p 133 (317)
T 3qh4_A 58 VAVADDVVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYP 133 (317)
T ss_dssp CEEEEEEEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred ceEEEEEecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCc
Confidence 3457888999999999999999963 5789999999987 666777778888874 4999999999977654321
Q ss_pred CCCCCcchHHHHHHHHHHHHhc---CC--CCcEEEEEEcchHHHHHHHHhcC-----CCccEEEEcCCccCHHHHHHHHH
Q 011425 111 YVSLGWHEKDDLKVVVSYLRGN---KQ--TSRIGLWGRSMGAVTSLLYGAED-----PSIAGMVLDSAFSDLFDLMLELV 180 (486)
Q Consensus 111 ~~~~~~~~~~Dl~~~i~~l~~~---~~--~~~i~LvGhSmGG~lAl~~A~~~-----p~v~~lVl~sp~~~~~~~~~~~~ 180 (486)
..++|+.++++|+.+. .+ .++|+|+|||+||.+++.++... +.++++|+++|..+... ....
T Consensus 134 ------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~-~~~~- 205 (317)
T 3qh4_A 134 ------AALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRP-TASR- 205 (317)
T ss_dssp ------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSC-CHHH-
T ss_pred ------hHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCC-CcCH-
Confidence 2378999999999885 23 36899999999999999998763 34999999999877531 1111
Q ss_pred HHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCC--CCEEEEEeCCCCCCCHHHHHHHHHHc---CCCcE
Q 011425 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF--IPALFGHASEDKFIRARHSDLIFNAY---AGDKN 255 (486)
Q Consensus 181 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~vp~~~~~~l~~~l---~~~~~ 255 (486)
.. ....+.+.......++...+.... ... ...+. ....+. .|+||++|+.|.+++ .+..+++.+ ...++
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~p~-~~~~l~~lpP~li~~G~~D~~~~--~~~~~a~~l~~~g~~~~ 279 (317)
T 3qh4_A 206 SE-FRATPAFDGEAASLMWRHYLAGQT-PSP-ESVPG-RRGQLAGLPATLITCGEIDPFRD--EVLDYAQRLLGAGVSTE 279 (317)
T ss_dssp HH-TTTCSSSCHHHHHHHHHHHHTTCC-CCT-TTCGG-GCSCCTTCCCEEEEEEEESTTHH--HHHHHHHHHHHTTCCEE
T ss_pred HH-hcCCCCcCHHHHHHHHHHhcCCCC-CCc-ccCCC-cccccCCCCceeEEecCcCCCch--hHHHHHHHHHHcCCCEE
Confidence 11 111222222222233333222211 000 00111 011111 399999999999976 333333332 35688
Q ss_pred EEEeCC-CCCCC-------ChHHHHHHHHHHHHHhcC
Q 011425 256 IIKFDG-DHNSS-------RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 256 l~~~~g-gH~~~-------~p~~~~~~I~~FL~~~l~ 284 (486)
++++++ +|.+. ..+++.+.+.+||.+++.
T Consensus 280 l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 280 LHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp EEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 999998 99732 357899999999998874
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-19 Score=182.18 Aligned_cols=120 Identities=27% Similarity=0.322 Sum_probs=98.5
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccC---------CeEEEEEcCCCCCCCCCCCCCC
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS---------NITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~---------Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
..+|..|++.++.+. .+..++|||+||++++...|..++..|.+. ||+|+++|+||||.|+.....
T Consensus 74 ~i~g~~i~~~~~~~~----~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~- 148 (388)
T 4i19_A 74 EIDGATIHFLHVRSP----EPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSA- 148 (388)
T ss_dssp EETTEEEEEEEECCS----STTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSC-
T ss_pred EECCeEEEEEEccCC----CCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCC-
Confidence 458999999877553 245789999999999999999999999876 899999999999999866542
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCc
Q 011425 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~ 169 (486)
.+ ..+++...+..+.+..+.++++++||||||.+++.+|..+|+ |+++|++++.
T Consensus 149 ~~-~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 149 GW-ELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp CC-CHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred CC-CHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 22 245566655555555577899999999999999999999998 9999999864
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=174.07 Aligned_cols=234 Identities=15% Similarity=0.063 Sum_probs=148.6
Q ss_pred EEEEEEEc-CCCcEEEEEEEecCCCC----CCCCCcEEEEeCCCCCChhhHHH--HHHHh-ccCCeEEEEEcCCCCCCCC
Q 011425 37 RQDLEIRN-ARGHVLQCSHYMPSPFP----EDTPLPCVVYCHGNSGCRADANE--AAVIL-LPSNITLFTLDFSGSGLSD 108 (486)
Q Consensus 37 ~~~i~~~~-~dG~~L~~~~~~P~~~~----~~~~~p~VV~lHG~gg~~~~~~~--~~~~L-~~~Gy~Vv~~D~rG~G~S~ 108 (486)
.+++++.+ ..|..+.+.+|+|.+.. ..++.|+||++||++++...|.. .+..+ ...|+.|+++|+++++.+.
T Consensus 7 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 86 (263)
T 2uz0_A 7 VMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTD 86 (263)
T ss_dssp EEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSB
T ss_pred EeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCcccc
Confidence 35566654 47889999999998641 24678999999999999888877 34444 4579999999999888765
Q ss_pred CCCCCCCcch-HHHHHHHHHHHHhcC--CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHh
Q 011425 109 GDYVSLGWHE-KDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYK 184 (486)
Q Consensus 109 ~~~~~~~~~~-~~Dl~~~i~~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~ 184 (486)
.......... ++|+..+++.+.... +..+++|+||||||.+++.+|. +|+ ++++|+++|.......... .
T Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~----~- 160 (263)
T 2uz0_A 87 TQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPE----S- 160 (263)
T ss_dssp CTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGG----G-
T ss_pred CCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhcccc----c-
Confidence 4321111111 344445554443311 2378999999999999999999 887 9999999998753220000 0
Q ss_pred hhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCC--CCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEe
Q 011425 185 IRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF--IPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKF 259 (486)
Q Consensus 185 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~ 259 (486)
..... . .+....+...........++...+.++. +|+|+++|++|.+++ .+..+++.+. ...+++++
T Consensus 161 ~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~ 232 (263)
T 2uz0_A 161 QNLGS--P----AYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHS 232 (263)
T ss_dssp TTCSC--H----HHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccc--c----hhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEEEC
Confidence 00000 0 1122222221111222334444444443 799999999999985 3455555543 35688889
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhcC
Q 011425 260 DGDHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 260 ~ggH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
+|+|.........+.+.+||.+.++
T Consensus 233 ~g~H~~~~~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 233 AGTHEWYYWEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp SCCSSHHHHHHHHHHHHHHSSSCCC
T ss_pred CCCcCHHHHHHHHHHHHHHHHhhcc
Confidence 9999765445677888899988765
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-19 Score=178.05 Aligned_cols=224 Identities=14% Similarity=0.060 Sum_probs=148.3
Q ss_pred CCcEEEEEEEecCCCCCCCCCcE-EEEeCCCC---CChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPC-VVYCHGNS---GCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~-VV~lHG~g---g~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
+|..+ |.|.+ .++.|+ ||++||++ ++...|..++..|+.. ||.|+++|||+++..... ..++
T Consensus 66 ~g~~~----~~p~~---~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~------~~~~ 132 (322)
T 3k6k_A 66 GGVPC----IRQAT---DGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFP------AAVD 132 (322)
T ss_dssp TTEEE----EEEEC---TTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTT------HHHH
T ss_pred CCEeE----EecCC---CCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCc------hHHH
Confidence 67666 45642 234555 99999977 7778888888888765 999999999998765421 3378
Q ss_pred HHHHHHHHHHhc-CCCCcEEEEEEcchHHHHHHHHhcCCC-----ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHH
Q 011425 121 DLKVVVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDPS-----IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKM 194 (486)
Q Consensus 121 Dl~~~i~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~~~p~-----v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~ 194 (486)
|+.++++|+.+. .+..+|+|+||||||.+++.+|...++ ++++|+++|+.+.......... .....+......
T Consensus 133 d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 211 (322)
T 3k6k_A 133 DCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSN-LADRDFLAEPDT 211 (322)
T ss_dssp HHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHH-TGGGCSSSCHHH
T ss_pred HHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhh-ccCCCCcCCHHH
Confidence 999999999987 455899999999999999999887543 8999999998764322111111 111112222222
Q ss_pred HHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCC----
Q 011425 195 AVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS---- 266 (486)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~---- 266 (486)
...+....+.. ........++.........|+||++|+.|.++ ..+..+++.+. ..++++++++ +|.+.
T Consensus 212 ~~~~~~~~~~~-~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~ 288 (322)
T 3k6k_A 212 LGEMSELYVGG-EDRKNPLISPVYADLSGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGK 288 (322)
T ss_dssp HHHHHHHHHTT-SCTTCTTTCGGGSCCTTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTT
T ss_pred HHHHHHHhcCC-CCCCCCcCCcccccccCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEEEEEECCCccccccccc
Confidence 22222222211 11111111222222233469999999999884 56666666553 4678999998 99754
Q ss_pred ---ChHHHHHHHHHHHHHhcCCC
Q 011425 267 ---RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 267 ---~p~~~~~~I~~FL~~~l~~~ 286 (486)
..+++.+.+.+||.+++...
T Consensus 289 ~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3k6k_A 289 FVNAADISIKEICHWISARISKL 311 (322)
T ss_dssp TCHHHHHHHHHHHHHHHTTCC--
T ss_pred cChHHHHHHHHHHHHHHHHHhcc
Confidence 25689999999999998754
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-19 Score=171.91 Aligned_cols=229 Identities=15% Similarity=0.176 Sum_probs=151.1
Q ss_pred EEEEEE-cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH---HHHHhccCCeEEEEEcCCCCCCCCCCC--
Q 011425 38 QDLEIR-NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSDGDY-- 111 (486)
Q Consensus 38 ~~i~~~-~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~S~~~~-- 111 (486)
+.+.+. ..+|..+.+.+|+|.+....++.|+||++||++++...|.. +...+...|+.|+++|.+++|.+....
T Consensus 16 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~ 95 (280)
T 3ls2_A 16 KQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDS 95 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSC
T ss_pred EEEEEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccc
Confidence 345554 45789999999999865445678999999999998887765 445566679999999998777652111
Q ss_pred ----------CCC-------CcchHHH-HHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 112 ----------VSL-------GWHEKDD-LKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 112 ----------~~~-------~~~~~~D-l~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
... ....... +.+++.++.+.+.. ++++|+||||||.+|+.+|..+|+ ++++++++|..+
T Consensus 96 ~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 96 YDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp TTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSC
T ss_pred cccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccC
Confidence 000 0011122 23555666665544 789999999999999999999998 999999999776
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC----CCCEEEEEeCCCCCCCHH----HH
Q 011425 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT----FIPALFGHASEDKFIRAR----HS 243 (486)
Q Consensus 172 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----~~PvLii~G~~D~~vp~~----~~ 243 (486)
....... ...+...+... .......++...+.++ .+|+|+++|+.|.+++.+ ..
T Consensus 176 ~~~~~~~-----------------~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~ 237 (280)
T 3ls2_A 176 PINCPWG-----------------VKAFTGYLGAD-KTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNL 237 (280)
T ss_dssp GGGSHHH-----------------HHHHHHHHCSC-GGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHH
T ss_pred cccCcch-----------------hhHHHhhcCch-HHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHH
Confidence 4221100 00011111100 0011122333333333 569999999999999962 33
Q ss_pred HHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 244 DLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 244 ~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
.+..+....+.+++++++ +|.......+...+.+|+.+++.
T Consensus 238 ~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 238 VAVAKQKDYPLTLEMQTGYDHSYFFISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCceEEEeCCCCCchhhHHHHHHHHHHHHHHHhc
Confidence 333333445789999999 99876556777888899988764
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-19 Score=178.52 Aligned_cols=217 Identities=14% Similarity=0.101 Sum_probs=138.0
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh---HHHHHHHhccCCeEEEEEc----CCCCCCCCCCCCCCCcchHH
Q 011425 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD---ANEAAVILLPSNITLFTLD----FSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~---~~~~~~~L~~~Gy~Vv~~D----~rG~G~S~~~~~~~~~~~~~ 120 (486)
..+.+..+.|. ++..|+|||+||++++... |..++..| ..||+|+++| +||||.|+.. ..++
T Consensus 24 ~~~~y~~~g~~----~~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~------~~~~ 92 (335)
T 2q0x_A 24 PYCKIPVFMMN----MDARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHA------HDAE 92 (335)
T ss_dssp TTEEEEEEEEC----TTSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHH------HHHH
T ss_pred CceeEEEeccC----CCCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcccc------CcHH
Confidence 56777666431 2356899999999875433 56677778 6699999994 5999998631 2368
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHh--cCCC-ccEEEEcCCccCHH---------HHHHHHHHHH-hhh-
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA--EDPS-IAGMVLDSAFSDLF---------DLMLELVDVY-KIR- 186 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~--~~p~-v~~lVl~sp~~~~~---------~~~~~~~~~~-~~~- 186 (486)
|+.++++++.+..+..+++|+||||||.+++.+|. .+|+ |+++|+++|..... .......... ...
T Consensus 93 d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (335)
T 2q0x_A 93 DVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGR 172 (335)
T ss_dssp HHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccC
Confidence 88999999887667899999999999999999998 4676 99999988764311 0000000000 000
Q ss_pred ----CC--c-----hhHHHHHHHH-----HHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH-----HHH
Q 011425 187 ----LP--K-----FTVKMAVQYM-----RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH-----SDL 245 (486)
Q Consensus 187 ----~p--~-----~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-----~~~ 245 (486)
.+ . .......... ...+.. .......+....+.+|++|+|+|+|++|.++|+.. ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~ 250 (335)
T 2q0x_A 173 GEDSLAMLKHYDIPITPARLAGGGFPTLQEAVWNP--CIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEG 250 (335)
T ss_dssp TTCGGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHH--HHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ccccccchhhccCccCHHHHhhccCCCchhhhhhh--hhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHH
Confidence 00 0 0000000000 000000 00000112335577899999999999999999763 456
Q ss_pred HHHHcCCCcE-------E-----EEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 011425 246 IFNAYAGDKN-------I-----IKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 246 l~~~l~~~~~-------l-----~~~~g-gH~~~~p~~~~~~I~~FL~~~l 283 (486)
+.+.++.... + +++++ || ++++.|.+||.+..
T Consensus 251 l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 251 VRDHTGCNRVTVSYFNDTCDELRRVLKAAES------EHVAAILQFLADED 295 (335)
T ss_dssp HHHHSSSSCEEEEECCCEECTTSCEEECCHH------HHHHHHHHHHHHHH
T ss_pred HHHhcCccccccccccchhhhhhcccCCCCC------HHHHHHHHHHHhhh
Confidence 6666665431 4 66776 99 45899999998764
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-20 Score=184.81 Aligned_cols=218 Identities=12% Similarity=0.054 Sum_probs=149.4
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
...++.+. +..+.+.+|.|.. ..++.|+|||+||++ ++...+..++..|+++||.|+++|+||+|.+..
T Consensus 57 ~~~~i~y~---~~~~~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~--- 128 (303)
T 4e15_A 57 TVDHLRYG---EGRQLVDVFYSEK--TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTL--- 128 (303)
T ss_dssp EEEEEECS---STTCEEEEEECTT--CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCH---
T ss_pred ceeeeccC---CCCcEEEEEecCC--CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCCh---
Confidence 34566665 4445666788863 345789999999954 566667778888999999999999999987531
Q ss_pred CCCcchHHHHHHHHHHHHh---cCCCCcEEEEEEcchHHHHHHHHhcCC--------CccEEEEcCCccCHHHHHHHHHH
Q 011425 113 SLGWHEKDDLKVVVSYLRG---NKQTSRIGLWGRSMGAVTSLLYGAEDP--------SIAGMVLDSAFSDLFDLMLELVD 181 (486)
Q Consensus 113 ~~~~~~~~Dl~~~i~~l~~---~~~~~~i~LvGhSmGG~lAl~~A~~~p--------~v~~lVl~sp~~~~~~~~~~~~~ 181 (486)
...+.|+.++++|+.+ ..+..+|+|+||||||++++.++.... .|+++|+++|..++.......
T Consensus 129 ---~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~-- 203 (303)
T 4e15_A 129 ---EQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLE-- 203 (303)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCT--
T ss_pred ---hHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhccc--
Confidence 1237889999999976 445689999999999999999998653 599999999998764432100
Q ss_pred HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchh-hhCCCC----CCCEEEEEeCCCCCCCHHHHHHHHHHcC---CC
Q 011425 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCL-KLAPKT----FIPALFGHASEDKFIRARHSDLIFNAYA---GD 253 (486)
Q Consensus 182 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i----~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~ 253 (486)
+... ...+. .........++. ..+..+ .+|+|++||++|.++++..+..+++.+. ..
T Consensus 204 ------~~~~--------~~~~~-~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~ 268 (303)
T 4e15_A 204 ------SVNP--------KNILG-LNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYK 268 (303)
T ss_dssp ------TTSG--------GGTTC-CCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCC
T ss_pred ------ccch--------hhhhc-CCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCc
Confidence 0000 00000 000001111222 234434 8999999999999999999999998874 36
Q ss_pred cEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 254 KNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 254 ~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
++++++++ +|+.. ........+.+||.+
T Consensus 269 ~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 299 (303)
T 4e15_A 269 ASFTLFKGYDHFDIIEETAIDDSDVSRFLRN 299 (303)
T ss_dssp EEEEEEEEEETTHHHHGGGSTTSHHHHHHHH
T ss_pred eEEEEeCCCCchHHHHHHhCCCcHHHHHHHH
Confidence 78999998 99744 334444555555543
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=191.29 Aligned_cols=244 Identities=16% Similarity=0.145 Sum_probs=166.6
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh-hH---H-------------------HHHHHhcc
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DA---N-------------------EAAVILLP 91 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~-~~---~-------------------~~~~~L~~ 91 (486)
+..+++.|+..||.+|.+.+|+|.+ .++.|+||+.||++.... .+ . ..+..|++
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~ 115 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNK---DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVP 115 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSS---SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGG
T ss_pred EEEEEEEEECCCCcEEEEEEEecCC---CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHh
Confidence 4568899999999999999999973 467899999999998632 11 0 12578999
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCc
Q 011425 92 SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (486)
Q Consensus 92 ~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~ 169 (486)
+||.|+++|+||+|.|.+.+......+.+|+.++|+|+.++... .+|+++|+||||++++.+|+..|. ++++|+.++.
T Consensus 116 ~Gy~vv~~D~RG~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~ 195 (560)
T 3iii_A 116 NDYVVVKVALRGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGL 195 (560)
T ss_dssp GTCEEEEEECTTSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCC
T ss_pred CCCEEEEEcCCCCCCCCCccccCChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCc
Confidence 99999999999999999987755445689999999999987433 699999999999999999998875 9999999999
Q ss_pred cCHHHHHHHHHHHHhhhCCchhHHHHH-------------HHHHHHHhhhhccc--ccccchhhhCCCCCCCEEEEEeCC
Q 011425 170 SDLFDLMLELVDVYKIRLPKFTVKMAV-------------QYMRRVIQKKAKFD--IMDLNCLKLAPKTFIPALFGHASE 234 (486)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~p~~~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLii~G~~ 234 (486)
.++...... ..+.....+...+.. .+...+.... .++ +...+. .+.+|++|+|+++|..
T Consensus 196 ~d~~~~~~~---~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp-~~d~~W~~~~~--~~~~I~vPvl~v~Gw~ 269 (560)
T 3iii_A 196 NDMYREVAF---HGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHP-LFDDFWKQRQV--PLSQIKTPLLTCASWS 269 (560)
T ss_dssp CBHHHHTTE---ETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCC-SSCHHHHTTBC--CGGGCCSCEEEEEEGG
T ss_pred cccccccee---cCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCC-CcchHhhccCC--chhhCCCCEEEeCCcC
Confidence 886531100 000000000000000 0000111000 000 001111 4568999999999999
Q ss_pred CCCCCHHHHHHHHHHcCCC-cEEEEeCCCCCCC-ChHHHHHHHHHHHHHhcCCCC
Q 011425 235 DKFIRARHSDLIFNAYAGD-KNIIKFDGDHNSS-RPQFYYDSVSIFFYNVLHPPQ 287 (486)
Q Consensus 235 D~~vp~~~~~~l~~~l~~~-~~l~~~~ggH~~~-~p~~~~~~I~~FL~~~l~~~~ 287 (486)
|..+......+.++.+... +.+++.+++|... ......+...+||+.+|+...
T Consensus 270 D~~~~~~g~l~~y~~l~~~~k~l~ih~~~~~~~~~~~~~~~~~~~wfD~~LkG~~ 324 (560)
T 3iii_A 270 TQGLHNRGSFEGFKQAASEEKWLYVHGRKEWESYYARENLERQKSFFDFYLKEEN 324 (560)
T ss_dssp GTTTTHHHHHHHHHHCCCSSEEEEEESSCHHHHHHSHHHHHHHHHHHHHHTSCCC
T ss_pred CCcccchhHHHHHHhccccCcEEEECCCCCcCcccChhHHHHHHHHHHHHhCCCC
Confidence 9856666677778887643 4455544444311 234567888999999998653
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=179.54 Aligned_cols=225 Identities=12% Similarity=-0.008 Sum_probs=147.8
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+.+++|.|.+ .++.|+||++||++ ++...+..++..|+. .||.|+++|||+.+..... ..++|+.+
T Consensus 66 ~i~~~~~~p~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~------~~~~D~~~ 136 (322)
T 3fak_A 66 GCAAEWVRAPG---CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFP------AAVEDGVA 136 (322)
T ss_dssp TEEEEEEECTT---CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT------HHHHHHHH
T ss_pred CeEEEEEeCCC---CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC------cHHHHHHH
Confidence 37788888863 35689999999976 667777778878776 5999999999987654311 23799999
Q ss_pred HHHHHHhc-CCCCcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 011425 125 VVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQY 198 (486)
Q Consensus 125 ~i~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 198 (486)
+++|+.+. .+..+|+|+|||+||++++.++...+ .++++|+++|+.+.......... .....+.........+
T Consensus 137 a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 215 (322)
T 3fak_A 137 AYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKT-RAEADPMVAPGGINKM 215 (322)
T ss_dssp HHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHH-TTTTCCSCCSSHHHHH
T ss_pred HHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHH-hCccCcccCHHHHHHH
Confidence 99999987 34479999999999999999987654 28999999998764321111111 0000111111122222
Q ss_pred HHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCC-------C
Q 011425 199 MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS-------R 267 (486)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~-------~ 267 (486)
....+... .......++....-....|+||++|+.|.++ ..+..+++.+. ..++++++++ +|.+. .
T Consensus 216 ~~~~~~~~-~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~ 292 (322)
T 3fak_A 216 AARYLNGA-DAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPE 292 (322)
T ss_dssp HHHHHTTS-CTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHH
T ss_pred HHHhcCCC-CCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHH
Confidence 22222111 1111111121111112249999999999884 45666666553 4678999998 99754 2
Q ss_pred hHHHHHHHHHHHHHhcCCC
Q 011425 268 PQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 268 p~~~~~~I~~FL~~~l~~~ 286 (486)
..++.+.+.+||.+++...
T Consensus 293 ~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 293 GKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 5788999999999998654
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-20 Score=166.08 Aligned_cols=167 Identities=16% Similarity=0.108 Sum_probs=125.7
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCe---EEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNI---TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy---~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
..|+|||+||++++...|..++..|.+.|| .|+++|+||+|.+.. ...+++.+.+..+.+..+..+++|+
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~~~~~~~lv 74 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY-------NNGPVLSRFVQKVLDETGAKKVDIV 74 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH-------HHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchh-------hhHHHHHHHHHHHHHHcCCCeEEEE
Confidence 357899999999999999999999999998 699999999998753 2245555555555555466899999
Q ss_pred EEcchHHHHHHHHhcC--CC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhh
Q 011425 142 GRSMGAVTSLLYGAED--PS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLK 218 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~--p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (486)
||||||.+++.++..+ |. |+++|+++++..... .. .+ . .
T Consensus 75 G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~------------~~-------------------~~--~-----~ 116 (181)
T 1isp_A 75 AHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTT------------GK-------------------AL--P-----G 116 (181)
T ss_dssp EETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTC------------SB-------------------CC--C-----C
T ss_pred EECccHHHHHHHHHhcCCCceEEEEEEEcCcccccc------------cc-------------------cC--C-----C
Confidence 9999999999999987 55 999999998854211 00 00 0 0
Q ss_pred hCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-ChHHHHHHHHHHHHHh
Q 011425 219 LAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 219 ~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-~p~~~~~~I~~FL~~~ 282 (486)
.....++|+|+++|++|.++|++.+. + ...+++++++ ||+.. ...++.+.|.+||.+.
T Consensus 117 ~~~~~~~p~l~i~G~~D~~v~~~~~~-----~-~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 176 (181)
T 1isp_A 117 TDPNQKILYTSIYSSADMIVMNYLSR-----L-DGARNVQIHGVGHIGLLYSSQVNSLIKEGLNGG 176 (181)
T ss_dssp SCTTCCCEEEEEEETTCSSSCHHHHC-----C-BTSEEEEESSCCTGGGGGCHHHHHHHHHHHTTT
T ss_pred CCCccCCcEEEEecCCCccccccccc-----C-CCCcceeeccCchHhhccCHHHHHHHHHHHhcc
Confidence 01124579999999999999998432 3 3457788887 99865 2247899999998764
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.7e-19 Score=165.76 Aligned_cols=184 Identities=13% Similarity=0.145 Sum_probs=131.6
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccC-----CeEEEEEcCCCCCCCC------C---------CCCCCCcch---
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPS-----NITLFTLDFSGSGLSD------G---------DYVSLGWHE--- 118 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~-----Gy~Vv~~D~rG~G~S~------~---------~~~~~~~~~--- 118 (486)
.+.+.|+|||+||++++...|..++..|..+ ||.|+++|.++++.+. . .........
T Consensus 19 ~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 98 (239)
T 3u0v_A 19 AGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDV 98 (239)
T ss_dssp SSCCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHH
T ss_pred CCCCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHH
Confidence 3457899999999999999998888887664 7999999987542110 0 000011111
Q ss_pred -HHHHHHHHHHHHhc-CCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 119 -KDDLKVVVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 119 -~~Dl~~~i~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
++++..+++.+... .+..+++|+||||||.+++.+|..+|+ ++++|+++++..........
T Consensus 99 ~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~---------------- 162 (239)
T 3u0v_A 99 MCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQA---------------- 162 (239)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHHH----------------
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHHH----------------
Confidence 33344444443322 234799999999999999999999987 99999999887532211100
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCC-EEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCCChHH
Q 011425 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP-ALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQF 270 (486)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~p~~ 270 (486)
. ......+| +|+++|++|.+++++.+..+++.+. .+.+++++++ +|... .+
T Consensus 163 ---~-------------------~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~ 218 (239)
T 3u0v_A 163 ---L-------------------QKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS--KT 218 (239)
T ss_dssp ---H-------------------HHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC--HH
T ss_pred ---H-------------------HhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC--HH
Confidence 0 01234567 9999999999999998888888774 3678999998 99977 56
Q ss_pred HHHHHHHHHHHhcCC
Q 011425 271 YYDSVSIFFYNVLHP 285 (486)
Q Consensus 271 ~~~~I~~FL~~~l~~ 285 (486)
..+.+.+||.+.+..
T Consensus 219 ~~~~~~~~l~~~l~~ 233 (239)
T 3u0v_A 219 ELDILKLWILTKLPG 233 (239)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhCCC
Confidence 788999999999864
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=178.95 Aligned_cols=228 Identities=14% Similarity=0.129 Sum_probs=150.1
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhc-cCCeEEEEEcCCCCCCCCCCCC
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILL-PSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~-~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
.+++.+...+| .+.+.+| + ..++.|+||++||++ ++...|..++..|+ ..||.|+++|+||+|.+...
T Consensus 56 ~~~~~i~~~~g-~i~~~~y-~----~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p-- 127 (311)
T 1jji_A 56 VEDRTIKGRNG-DIRVRVY-Q----QKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFP-- 127 (311)
T ss_dssp EEEEEEEETTE-EEEEEEE-E----SSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTT--
T ss_pred EEEEEecCCCC-cEEEEEE-c----CCCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCC--
Confidence 47788888888 8888888 4 235679999999999 88888888888888 56999999999999988642
Q ss_pred CCCcchHHHHHHHHHHHHhcC---CC--CcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccCHHHHHHHHHHH
Q 011425 113 SLGWHEKDDLKVVVSYLRGNK---QT--SRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLFDLMLELVDV 182 (486)
Q Consensus 113 ~~~~~~~~Dl~~~i~~l~~~~---~~--~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~~~~~~~~~~~~ 182 (486)
...+|+.++++|+.+.. +. ++++|+|||+||.+++.++...+ .++++|+++|..+..........
T Consensus 128 ----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~- 202 (311)
T 1jji_A 128 ----AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLE- 202 (311)
T ss_dssp ----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHH-
T ss_pred ----CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHHH-
Confidence 23678888888887752 33 48999999999999999987754 39999999998754211111111
Q ss_pred HhhhCCc-hhHHHHHHHHHHHHhhhhcccccccchh-hhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc---CCCcEEE
Q 011425 183 YKIRLPK-FTVKMAVQYMRRVIQKKAKFDIMDLNCL-KLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNII 257 (486)
Q Consensus 183 ~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l---~~~~~l~ 257 (486)
+. ..+. ........+....+...........++. ..+..+ .|+||++|+.|.+++ ....+++.+ ...++++
T Consensus 203 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~~--~~~~~~~~l~~~g~~~~~~ 278 (311)
T 1jji_A 203 FG-EGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLRD--EGEVFGQMLRRAGVEASIV 278 (311)
T ss_dssp TS-SSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTHH--HHHHHHHHHHHTTCCEEEE
T ss_pred hc-CCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcchH--HHHHHHHHHHHcCCCEEEE
Confidence 00 0111 1112222222222111111000011111 123333 499999999999985 334444433 3568899
Q ss_pred EeCC-CCCCC-------ChHHHHHHHHHHHHH
Q 011425 258 KFDG-DHNSS-------RPQFYYDSVSIFFYN 281 (486)
Q Consensus 258 ~~~g-gH~~~-------~p~~~~~~I~~FL~~ 281 (486)
+++| +|.+. ..+++.+.+.+||.+
T Consensus 279 ~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 279 RYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred EECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9998 99754 236778888888864
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=167.74 Aligned_cols=180 Identities=14% Similarity=0.112 Sum_probs=127.1
Q ss_pred CCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC---CCCCCcchH----HHHHHHHHHHHhc-
Q 011425 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD---YVSLGWHEK----DDLKVVVSYLRGN- 132 (486)
Q Consensus 61 ~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~---~~~~~~~~~----~Dl~~~i~~l~~~- 132 (486)
|....+++|||+||+|++...|..+++.|...|+.|+++|.+|++--+.. ........+ +.+..+++.+...
T Consensus 17 P~~~a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 96 (210)
T 4h0c_A 17 PVQRAKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQG 96 (210)
T ss_dssp CTTTCSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTT
T ss_pred CcccCCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhC
Confidence 45567899999999999999998888888888999999999987532211 111111112 3344445555443
Q ss_pred CCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccc
Q 011425 133 KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (486)
Q Consensus 133 ~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 211 (486)
.+.++|+|+|+|+||.+++.++..+|+ +.++|.+++.... +...
T Consensus 97 i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~---------------~~~~-------------------- 141 (210)
T 4h0c_A 97 IPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIG---------------QELA-------------------- 141 (210)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCS---------------SSCC--------------------
T ss_pred CChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCC---------------hhhh--------------------
Confidence 223799999999999999999999998 9999998875421 0000
Q ss_pred cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCCChHHHHHHHHHHHH
Q 011425 212 MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 212 ~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~ 280 (486)
..........+|+|++||++|++||++.++++++.+. .+++++.|++ ||... +++ .+.+.+||.
T Consensus 142 ---~~~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~-~~e-l~~i~~wL~ 209 (210)
T 4h0c_A 142 ---IGNYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS-GDE-IQLVNNTIL 209 (210)
T ss_dssp ---GGGCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC-HHH-HHHHHHTTT
T ss_pred ---hhhhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC-HHH-HHHHHHHHc
Confidence 0000111235799999999999999999888877664 4678899998 99764 333 566777764
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.81 E-value=6.4e-19 Score=191.98 Aligned_cols=250 Identities=16% Similarity=0.156 Sum_probs=166.2
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh--------hHHHH---H-HHhccCCeEEEEEc
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--------DANEA---A-VILLPSNITLFTLD 100 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~--------~~~~~---~-~~L~~~Gy~Vv~~D 100 (486)
..|..+++.+...||..|.+++|.|.+ .++.|+||++||++.... .|... . +.|+.+||.|+++|
T Consensus 33 ~~~~~~~v~i~~~DG~~L~~~l~~P~~---~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D 109 (652)
T 2b9v_A 33 RDYIKREVMVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQD 109 (652)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred CCcEEEEEEEECCCCcEEEEEEEecCC---CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEe
Confidence 357778999999999999999999974 256799999999875421 12221 2 77889999999999
Q ss_pred CCCCCCCCCCCCCCC----------cchHHHHHHHHHHHHhc-CCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcC
Q 011425 101 FSGSGLSDGDYVSLG----------WHEKDDLKVVVSYLRGN-KQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDS 167 (486)
Q Consensus 101 ~rG~G~S~~~~~~~~----------~~~~~Dl~~~i~~l~~~-~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~s 167 (486)
+||+|.|.+.+.... ..+++|+.++|+|+.++ ... .+|+++|+||||++++.+|...+. ++++|+.+
T Consensus 110 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~ 189 (652)
T 2b9v_A 110 IRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPES 189 (652)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEE
T ss_pred cCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEecc
Confidence 999999998765441 25689999999999987 332 699999999999999999987766 99999988
Q ss_pred CccCHHH--H----------HHHHHHHHhhh------CCc---hhHHH---------HH--------HHHHHHHhhhhcc
Q 011425 168 AFSDLFD--L----------MLELVDVYKIR------LPK---FTVKM---------AV--------QYMRRVIQKKAKF 209 (486)
Q Consensus 168 p~~~~~~--~----------~~~~~~~~~~~------~p~---~~~~~---------~~--------~~~~~~~~~~~~~ 209 (486)
+..++.. . ...+....... .+. ..... .. .++...+.....-
T Consensus 190 ~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d 269 (652)
T 2b9v_A 190 PMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYD 269 (652)
T ss_dssp ECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSSS
T ss_pred cccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCCC
Confidence 8776431 0 00010000000 000 00000 00 0111111100000
Q ss_pred -cccccchhhhCCC--CCCCEEEEEeCCCCCCCHHHHHHHHHHcC-----CCcEEEEeCCCCCCCC-----h--------
Q 011425 210 -DIMDLNCLKLAPK--TFIPALFGHASEDKFIRARHSDLIFNAYA-----GDKNIIKFDGDHNSSR-----P-------- 268 (486)
Q Consensus 210 -~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~~~~l~~~l~-----~~~~l~~~~ggH~~~~-----p-------- 268 (486)
.+...++...+.+ |++|+|+|+|..|.. +...+.++++.+. ....+++.+++|..+. +
T Consensus 270 ~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~~H~~~~~~~~~~~~~~f~~~ 348 (652)
T 2b9v_A 270 AFWQGQALDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPWRHSGVNYNGSTLGPLEFEGD 348 (652)
T ss_dssp HHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESCCTTGGGSCCSEETTEECSSC
T ss_pred hHHhcCChhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCCCCCCcccccccCCccccccc
Confidence 0112345556777 999999999999997 4455666666654 3467888888996421 0
Q ss_pred ---HHHHHHHHHHHHHhcCCC
Q 011425 269 ---QFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 269 ---~~~~~~I~~FL~~~l~~~ 286 (486)
....+.+.+||+.+|+..
T Consensus 349 ~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 349 TAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp HHHHHHHHTHHHHHHHHHSTT
T ss_pred cchhhhhhHHHHHHHHHhCCC
Confidence 123677899999999865
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-19 Score=168.38 Aligned_cols=189 Identities=11% Similarity=-0.002 Sum_probs=137.0
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCC---CCCCCCC---CCc---
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGL---SDGDYVS---LGW--- 116 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~---S~~~~~~---~~~--- 116 (486)
++..+.+.++.|. ....|+|||+||++++...|..++..|.. ||.|+++|.+++.. +-..... ...
T Consensus 14 ~~~~l~~~~~~~~----~~~~p~vv~lHG~g~~~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~ 88 (223)
T 3b5e_A 14 TDLAFPYRLLGAG----KESRECLFLLHGSGVDETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSI 88 (223)
T ss_dssp CSSSSCEEEESTT----SSCCCEEEEECCTTBCTTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHH
T ss_pred cCCCceEEEeCCC----CCCCCEEEEEecCCCCHHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHHH
Confidence 4555666555442 23459999999999999999999988886 99999999887421 1000000 000
Q ss_pred -chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhH
Q 011425 117 -HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTV 192 (486)
Q Consensus 117 -~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~ 192 (486)
..++++.++++++.+.++. ++++|+||||||.+++.+|..+|+ ++++|++++..... .
T Consensus 89 ~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~--------------~---- 150 (223)
T 3b5e_A 89 LAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD--------------H---- 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS--------------S----
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc--------------c----
Confidence 1256677777777665433 789999999999999999999997 99999999876420 0
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEeCCCCCCCChH
Q 011425 193 KMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDGDHNSSRPQ 269 (486)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~~ggH~~~~p~ 269 (486)
......+++|+|+++|++|.++|++.+. +++.+.. ..+++++++||... .
T Consensus 151 ------------------------~~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~~gH~~~--~ 203 (223)
T 3b5e_A 151 ------------------------VPATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIPSGHDIG--D 203 (223)
T ss_dssp ------------------------CCCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEESCCSCCC--H
T ss_pred ------------------------cccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEecCCCCcC--H
Confidence 0122346789999999999999999888 8887753 57888889999875 3
Q ss_pred HHHHHHHHHHHHhcC
Q 011425 270 FYYDSVSIFFYNVLH 284 (486)
Q Consensus 270 ~~~~~I~~FL~~~l~ 284 (486)
+..+.+.+||.+.+.
T Consensus 204 ~~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 204 PDAAIVRQWLAGPIA 218 (223)
T ss_dssp HHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhhhh
Confidence 345788999987653
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-19 Score=170.20 Aligned_cols=196 Identities=14% Similarity=0.131 Sum_probs=129.6
Q ss_pred CCcEEEEeCCCCCChhhHH----HHHHHhccCCeEEEEEcCC---------------------CCCCCCCCCCCCCcchH
Q 011425 65 PLPCVVYCHGNSGCRADAN----EAAVILLPSNITLFTLDFS---------------------GSGLSDGDYVSLGWHEK 119 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~----~~~~~L~~~Gy~Vv~~D~r---------------------G~G~S~~~~~~~~~~~~ 119 (486)
..|+||++||++++...|. .+...|.+.||.|+++|+| |+|.+.+.+........
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~ 83 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE 83 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcch
Confidence 4689999999999998876 3566677779999999999 34443221111111112
Q ss_pred HHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcC-------CCccEEEEcCCccCHHHHHHHHHHHHhhhCCch
Q 011425 120 DDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKF 190 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~-------p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~ 190 (486)
.|+.++++++.+... ..+++|+||||||.+|+.+|.+. |.++++++++++....... ..+..
T Consensus 84 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---------~~~~~ 154 (243)
T 1ycd_A 84 LDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---------EHPGE 154 (243)
T ss_dssp CCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT---------TSTTC
T ss_pred hhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc---------ccccc
Confidence 445555555544321 25789999999999999998864 4588888888765321000 00000
Q ss_pred hHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-------CcEEEEeCCCC
Q 011425 191 TVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-------DKNIIKFDGDH 263 (486)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-------~~~l~~~~ggH 263 (486)
......+ ......+.++++|+|++||++|.++|++.+..+++.++. ...+++.++||
T Consensus 155 ------------~~~~~~~----~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH 218 (243)
T 1ycd_A 155 ------------LRITEKF----RDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGH 218 (243)
T ss_dssp ------------EEECGGG----TTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSS
T ss_pred ------------cccchhH----HHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCC
Confidence 0000000 011123456889999999999999999999999887754 24455566799
Q ss_pred CCCChHHHHHHHHHHHHHhcCC
Q 011425 264 NSSRPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 264 ~~~~p~~~~~~I~~FL~~~l~~ 285 (486)
.....+.+.+.|.+||.+.+..
T Consensus 219 ~~~~~~~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 219 MVPNKKDIIRPIVEQITSSLQE 240 (243)
T ss_dssp SCCCCHHHHHHHHHHHHHHHC-
T ss_pred cCCchHHHHHHHHHHHHHhhhh
Confidence 9775567999999999988753
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-19 Score=160.98 Aligned_cols=176 Identities=13% Similarity=0.066 Sum_probs=121.5
Q ss_pred CcEEEEeCCCCCChh-hHHHHHH-HhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 66 LPCVVYCHGNSGCRA-DANEAAV-ILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~-~~~~~~~-~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
.|+|||+||++++.. .|..... .|.+.||.|+++|+|. +... ..+++.+.+..+.+.. ..+++|+||
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~---~~~~-------~~~~~~~~~~~~~~~~-~~~~~l~G~ 72 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPN---PLQP-------RLEDWLDTLSLYQHTL-HENTYLVAH 72 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSC---TTSC-------CHHHHHHHHHTTGGGC-CTTEEEEEE
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCC---CCCC-------CHHHHHHHHHHHHHhc-cCCEEEEEe
Confidence 578999999999988 7877764 6878899999999992 2211 1344444444443443 589999999
Q ss_pred cchHHHHHHHHhcCCC---ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhC
Q 011425 144 SMGAVTSLLYGAEDPS---IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLA 220 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~---v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (486)
||||.+++.+|..+|+ |+++|+++|+...... .+. ...+.....+. ..+
T Consensus 73 S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-----------~~~----------------~~~~~~~~~~~-~~~ 124 (192)
T 1uxo_A 73 SLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT-----------LQM----------------LDEFTQGSFDH-QKI 124 (192)
T ss_dssp TTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT-----------CGG----------------GGGGTCSCCCH-HHH
T ss_pred CccHHHHHHHHHHhcccCCccEEEEeccCCCcccc-----------chh----------------hhhhhhcCCCH-HHH
Confidence 9999999999999885 9999999987653210 000 00000001111 233
Q ss_pred CCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 221 PKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 221 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
.++++|+|+++|++|.++|++.+..+.+.+ +.+++++++ ||+.. .++.+ ..+.+||.+.+
T Consensus 125 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~-~~~~~~l~~~l 187 (192)
T 1uxo_A 125 IESAKHRAVIASKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSL-PIVYDVLTSYF 187 (192)
T ss_dssp HHHEEEEEEEEETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCC-HHHHHHHHHHH
T ss_pred HhhcCCEEEEecCCCCcCCHHHHHHHHHhc--CceEEEeCCCcCcccccccccH-HHHHHHHHHHH
Confidence 456689999999999999999999999988 567888987 99876 33222 22444544443
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=191.59 Aligned_cols=245 Identities=16% Similarity=0.136 Sum_probs=164.2
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHH---H-HHhccCCeEEEEEcCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA---A-VILLPSNITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~---~-~~L~~~Gy~Vv~~D~rG~G~S~~~~ 111 (486)
..+++.+...||..|.+.+|.|.+ .++.|+||++||++.....+..+ + ..|+++||.|+++|+||+|.|.+.+
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~---~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~ 84 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDA---DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEF 84 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC---SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCC
T ss_pred EEEEEEEECCCCCEEEEEEEECCC---CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcc
Confidence 457899999999999999999963 35789999999998875433333 3 7888999999999999999999876
Q ss_pred CCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCc-cCHHH------------HH
Q 011425 112 VSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF-SDLFD------------LM 176 (486)
Q Consensus 112 ~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~-~~~~~------------~~ 176 (486)
... ..+.+|+.++|+|+.++... .+|+++|+||||++++.+|+..+. ++++|+.++. .+... ..
T Consensus 85 ~~~-~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG~~~~~~~ 163 (587)
T 3i2k_A 85 VPH-VDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGALSVEAL 163 (587)
T ss_dssp CTT-TTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTCCCCHHHH
T ss_pred ccc-cchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCCccccchH
Confidence 654 25689999999999877433 699999999999999999998776 9999998887 43211 11
Q ss_pred HHHHHH---Hhh-----hCCchhHHHHHHH------HHHHHh------------------hh-hc-----ccccccchhh
Q 011425 177 LELVDV---YKI-----RLPKFTVKMAVQY------MRRVIQ------------------KK-AK-----FDIMDLNCLK 218 (486)
Q Consensus 177 ~~~~~~---~~~-----~~p~~~~~~~~~~------~~~~~~------------------~~-~~-----~~~~~~~~~~ 218 (486)
..+... ... ..+... .....+ +...+. .. .. -.+...+...
T Consensus 164 ~~w~~~~~~~~~~~~~~~~p~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~yw~~~s~~~ 242 (587)
T 3i2k_A 164 LGWSALIGTGLITSRSDARPEDA-ADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDNDESWQSISLFE 242 (587)
T ss_dssp HHHHHHHHHHHHHHSSSCCTTHH-HHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCSCCHHHHTTCCHH
T ss_pred HHHHHHhhhhcccccccCCccch-hhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCCCChHHhcCChhh
Confidence 111110 000 000000 000000 000000 00 00 0011223445
Q ss_pred hCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC--CcEEEEeCCCCCCC---------ChH------HHHHHHHHHHHH
Q 011425 219 LAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG--DKNIIKFDGDHNSS---------RPQ------FYYDSVSIFFYN 281 (486)
Q Consensus 219 ~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~--~~~l~~~~ggH~~~---------~p~------~~~~~I~~FL~~ 281 (486)
.+.+|++|+|+++|..|..+ ....++++.+.. ...+++-+..|... .+. +..+.+.+||+.
T Consensus 243 ~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~~~L~iGPw~H~~~~~~~g~~~~g~~~~~~~~~~~~~~~~wFD~ 320 (587)
T 3i2k_A 243 RLGGLATPALITAGWYDGFV--GESLRTFVAVKDNADARLVVGPWSHSNLTGRNADRKFGIAATYPIQEATTMHKAFFDR 320 (587)
T ss_dssp HHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTTTSCEEEEEEEEETTBCSSEETTEECCGGGSCCHHHHHHHHHHHHHH
T ss_pred hhccCCCCEEEEccCCCccc--hHHHHHHHHHhhcCCCEEEECCccccCccccCCCcccCCccccccchhhHHHHHHHHH
Confidence 67889999999999999875 346677777753 23677667677642 111 233889999999
Q ss_pred hcCCCC
Q 011425 282 VLHPPQ 287 (486)
Q Consensus 282 ~l~~~~ 287 (486)
+|+...
T Consensus 321 ~Lkg~~ 326 (587)
T 3i2k_A 321 HLRGET 326 (587)
T ss_dssp HHSCCT
T ss_pred HhcCCC
Confidence 998653
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-19 Score=178.30 Aligned_cols=221 Identities=8% Similarity=-0.052 Sum_probs=138.8
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~ 125 (486)
+.+++|.|.+ ++.|+|||+||++ ++...|..++..|+. .||.|+++|+||.+.... ...++|+.++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~------~~~~~d~~~~ 153 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI------DDTFQAIQRV 153 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCH------HHHHHHHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCc------hHHHHHHHHH
Confidence 4555677752 4679999999965 466677778888874 599999999998654321 1237899999
Q ss_pred HHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHH
Q 011425 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMR 200 (486)
Q Consensus 126 i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 200 (486)
++++.+..+.++++|+||||||.+|+.+|...| .++++|+++|..+................+.........+..
T Consensus 154 ~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (326)
T 3d7r_A 154 YDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMK 233 (326)
T ss_dssp HHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCSSCCHHHHHHHHH
T ss_pred HHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCcccCHHHHHHHHH
Confidence 999988766789999999999999999998754 299999999986532100000000000011111111111111
Q ss_pred HHHhhhhcccccccchh-hhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc---CCCcEEEEeCC-CCCCC-----ChHH
Q 011425 201 RVIQKKAKFDIMDLNCL-KLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHNSS-----RPQF 270 (486)
Q Consensus 201 ~~~~~~~~~~~~~~~~~-~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l---~~~~~l~~~~g-gH~~~-----~p~~ 270 (486)
..... .........+. ..+.. -+|+|+++|++|..+ ..+..+.+.+ ....+++++++ +|... .+++
T Consensus 234 ~~~~~-~~~~~~~~~~~~~~~~~-~~P~lii~G~~D~~~--~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~ 309 (326)
T 3d7r_A 234 KWANG-LPLTDKRISPINGTIEG-LPPVYMFGGGREMTH--PDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHK 309 (326)
T ss_dssp HHHTT-SCTTSTTTSGGGSCCTT-CCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHH
T ss_pred HhcCC-CCCCCCeECcccCCccc-CCCEEEEEeCcccch--HHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHH
Confidence 11111 11000011111 11222 259999999999754 3444454443 34678999998 89854 4568
Q ss_pred HHHHHHHHHHHhcC
Q 011425 271 YYDSVSIFFYNVLH 284 (486)
Q Consensus 271 ~~~~I~~FL~~~l~ 284 (486)
+.+.|.+||.+++.
T Consensus 310 ~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 310 AIKQIAKSIDEDVT 323 (326)
T ss_dssp HHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHhh
Confidence 89999999987764
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-18 Score=168.06 Aligned_cols=216 Identities=14% Similarity=0.132 Sum_probs=143.0
Q ss_pred eeEEEEEEE---cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-HHHHHHhccCCeEEEEEcCC--------
Q 011425 35 YKRQDLEIR---NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFS-------- 102 (486)
Q Consensus 35 ~~~~~i~~~---~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-~~~~~~L~~~Gy~Vv~~D~r-------- 102 (486)
.....+.|. ..+|..+.+++|.|.+. ..+.|+||++||++++...| ..++..+.+.||.|+++|+|
T Consensus 22 ~g~~~~~~~~~~~~~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~ 99 (304)
T 3d0k_A 22 AGRNAIPYLDDDRNADRPFTLNTYRPYGY--TPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVE 99 (304)
T ss_dssp SEEEEEEECC---CTTCCEEEEEEECTTC--CTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHH
T ss_pred CCCceEEecccCCCCCceEEEEEEeCCCC--CCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCcc
Confidence 334456666 67889999999999742 24679999999999998887 55677888889999999999
Q ss_pred ----CC--CCCCCCCCCCCcchHHHHHHHHHHHHhcCC--CCcEEEEEEcchHHHHHHHHhcCCC--ccEEEEcC-CccC
Q 011425 103 ----GS--GLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDS-AFSD 171 (486)
Q Consensus 103 ----G~--G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~p~--v~~lVl~s-p~~~ 171 (486)
|+ |.|.+... ......+++.++++++.+... .++|+|+||||||.+++.++..+|+ ++++|+.+ ++..
T Consensus 100 ~~~~g~~~g~s~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~ 178 (304)
T 3d0k_A 100 SYNNGRAFTAAGNPRH-VDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYT 178 (304)
T ss_dssp HTTTTTCBCTTSCBCC-GGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCC
T ss_pred ccccCccccccCCCCc-ccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcccc
Confidence 55 66543211 111224789999999988643 4799999999999999999999984 89998766 4433
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCC------------
Q 011425 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIR------------ 239 (486)
Q Consensus 172 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp------------ 239 (486)
+.... ..+ .........+.......+.+|++++||+.|.++.
T Consensus 179 ~~~~~-----------~~~---------------~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~ 232 (304)
T 3d0k_A 179 LPTFE-----------HRF---------------PEGLDGVGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALR 232 (304)
T ss_dssp CSSTT-----------SBT---------------TTSSBTTTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHT
T ss_pred cCCcc-----------ccC---------------ccccCCCCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhc
Confidence 11100 000 0000000001111122345799999999999752
Q ss_pred -----HHHHHHHHH-------HcCCC--cEEEEeCC-CCCCCChHHHHHHHHHHHHHh
Q 011425 240 -----ARHSDLIFN-------AYAGD--KNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 240 -----~~~~~~l~~-------~l~~~--~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~ 282 (486)
.+.+..+++ ..+.. .++++++| ||.. ......+.+||...
T Consensus 233 ~~~~~~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~---~~~~~~~~~~~~~~ 287 (304)
T 3d0k_A 233 QGPHRYARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDG---QAMSQVCASLWFDG 287 (304)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSCH---HHHHHHHHHHHHTS
T ss_pred cCccHHHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCch---HHHHHHHHHHHhhh
Confidence 223333333 33333 78999998 9986 35566777777654
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=177.02 Aligned_cols=198 Identities=16% Similarity=0.186 Sum_probs=146.4
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH--HHH----------HHHhccCCeEEEEEcCCCC
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA--NEA----------AVILLPSNITLFTLDFSGS 104 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~--~~~----------~~~L~~~Gy~Vv~~D~rG~ 104 (486)
+.+.+... +|..+.+.+|.|.+....++.|+||++||+++....+ ..+ .......++.|+++|++|.
T Consensus 145 ~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~ 224 (380)
T 3doh_A 145 LAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPN 224 (380)
T ss_dssp EEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTT
T ss_pred cceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCC
Confidence 56778888 9999999999998654556789999999998653321 111 1223456789999999987
Q ss_pred CCCCCCCCC-----CCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHH
Q 011425 105 GLSDGDYVS-----LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (486)
Q Consensus 105 G~S~~~~~~-----~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~ 176 (486)
+.....+.. .......|+.++++++.+.... ++|+|+||||||.+++.++..+|+ ++++|+++|....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~---- 300 (380)
T 3doh_A 225 SSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV---- 300 (380)
T ss_dssp CCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG----
T ss_pred CcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh----
Confidence 654332221 1113378888999998887665 489999999999999999999998 9999999988510
Q ss_pred HHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHcC---C
Q 011425 177 LELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYA---G 252 (486)
Q Consensus 177 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~---~ 252 (486)
..+..+ .+|+|+++|+.|.++|++.+..+++.+. .
T Consensus 301 -----------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~ 339 (380)
T 3doh_A 301 -----------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGG 339 (380)
T ss_dssp -----------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTC
T ss_pred -----------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 111123 3899999999999999999999888764 3
Q ss_pred CcEEEEeCCC---------CCCCChHHHHH--HHHHHHHHh
Q 011425 253 DKNIIKFDGD---------HNSSRPQFYYD--SVSIFFYNV 282 (486)
Q Consensus 253 ~~~l~~~~gg---------H~~~~p~~~~~--~I~~FL~~~ 282 (486)
..++++++++ |.. ...... .+.+||.++
T Consensus 340 ~~~~~~~~~~~h~~h~~~~H~~--~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 340 KVRYTEYEKGFMEKHGWDPHGS--WIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp CEEEEEECTTHHHHTTCCTTCT--HHHHHTCHHHHHHHHTC
T ss_pred ceEEEEecCCcccCCCCCCchh--HHHhcCCHHHHHHHHhh
Confidence 5788899875 542 233444 788999864
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-18 Score=175.26 Aligned_cols=118 Identities=14% Similarity=0.131 Sum_probs=93.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhcc------CCeEEEEEcCCCCCCCCCCCCCCCcch
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP------SNITLFTLDFSGSGLSDGDYVSLGWHE 118 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~------~Gy~Vv~~D~rG~G~S~~~~~~~~~~~ 118 (486)
.+|..|++..+.+. .+..++|||+||++++...|..++..|.+ .||+|+++|+||||.|+.......+ .
T Consensus 92 i~g~~i~~~~~~~~----~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~~-~ 166 (408)
T 3g02_A 92 IEGLTIHFAALFSE----REDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDF-G 166 (408)
T ss_dssp ETTEEEEEEEECCS----CTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSCC-C
T ss_pred ECCEEEEEEEecCC----CCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCCC-C
Confidence 38999999887542 24568899999999999999999988887 5899999999999999875422222 2
Q ss_pred HHHHHHHHHHHHhcCCCC-cEEEEEEcchHHHHHHHHhcCCCccEEEEcC
Q 011425 119 KDDLKVVVSYLRGNKQTS-RIGLWGRSMGAVTSLLYGAEDPSIAGMVLDS 167 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~-~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~s 167 (486)
.+++.+.+..+.+..+.+ +++++||||||.+++.+|..+|++.++++..
T Consensus 167 ~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~ 216 (408)
T 3g02_A 167 LMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNF 216 (408)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeC
Confidence 455555555555555776 9999999999999999999998866666543
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=176.28 Aligned_cols=129 Identities=16% Similarity=0.115 Sum_probs=92.5
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-----------HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc
Q 011425 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----------ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW 116 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-----------~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~ 116 (486)
..+.++++.|.+....++.|+||++||+++.... +..++..|+.+||.|+++|+||+|.|.........
T Consensus 61 ~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~ 140 (397)
T 3h2g_A 61 ATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLH 140 (397)
T ss_dssp EEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTC
T ss_pred EEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhh
Confidence 4688999999865445678999999999987654 55678889999999999999999998643332221
Q ss_pred -----chHHHHHHHHHHHHhcCCC---CcEEEEEEcchHHHHHHHHh-cC----CC--ccEEEEcCCccCHHHHH
Q 011425 117 -----HEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGA-ED----PS--IAGMVLDSAFSDLFDLM 176 (486)
Q Consensus 117 -----~~~~Dl~~~i~~l~~~~~~---~~i~LvGhSmGG~lAl~~A~-~~----p~--v~~lVl~sp~~~~~~~~ 176 (486)
..+.|+...+..+.+..+. .+++|+||||||.+++.++. .. +. +.+++..+++.++....
T Consensus 141 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (397)
T 3h2g_A 141 SASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYALEQTF 215 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccHHHHH
Confidence 1233444444444443343 69999999999999988762 22 22 78888888887765443
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=171.60 Aligned_cols=205 Identities=12% Similarity=0.011 Sum_probs=134.7
Q ss_pred CCCCcEEEEeCCC--CCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEE
Q 011425 63 DTPLPCVVYCHGN--SGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGL 140 (486)
Q Consensus 63 ~~~~p~VV~lHG~--gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~L 140 (486)
.+..|+|||+||+ +++...|..++..| ..+|.|+++|+||||.+...+. .+ ...+..+++.+.......+++|
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~~--~~--~~~~~~~~~~l~~~~~~~~~~l 152 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPGFHGGQALPA--TL--TVLVRSLADVVQAEVADGEFAL 152 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTTSSTTCCEES--SH--HHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCCCCCCCCCCC--CH--HHHHHHHHHHHHHhcCCCCEEE
Confidence 3567999999995 67788899999988 5689999999999998764332 22 1223333444444434579999
Q ss_pred EEEcchHHHHHHHHhcC---CC-ccEEEEcCCccCHHH--HHHH----HHHHHh------hhCCchhHHHHHHHHHHHHh
Q 011425 141 WGRSMGAVTSLLYGAED---PS-IAGMVLDSAFSDLFD--LMLE----LVDVYK------IRLPKFTVKMAVQYMRRVIQ 204 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~~---p~-v~~lVl~sp~~~~~~--~~~~----~~~~~~------~~~p~~~~~~~~~~~~~~~~ 204 (486)
+||||||.+++.+|... +. |+++|+++++..... .... +..... ..... .......+...+.
T Consensus 153 vGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~ 230 (319)
T 3lcr_A 153 AGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGN--LSQRITAQVWCLE 230 (319)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCc--hhHHHHHHHHHHH
Confidence 99999999999999886 65 999999887643211 1111 110000 00000 0000000111110
Q ss_pred hhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC----ChHHHHHHHHHHHH
Q 011425 205 KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS----RPQFYYDSVSIFFY 280 (486)
Q Consensus 205 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~----~p~~~~~~I~~FL~ 280 (486)
.... .....+++|+|+|+|.+ ..+++.....+.+.++....+++++++|+.+ .++++.+.|.+||.
T Consensus 231 ~~~~---------~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~H~~~~~~~~~~~va~~i~~fL~ 300 (319)
T 3lcr_A 231 LLRG---------WRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAAMGQVVEAPGDHFTIIEGEHVASTAHIVGDWLR 300 (319)
T ss_dssp HTTT---------CCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHTCSEEEEESSCTTGGGSTTTHHHHHHHHHHHHH
T ss_pred HHhc---------CCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCCCceEEEeCCCcHHhhCcccHHHHHHHHHHHHH
Confidence 0000 11257899999999998 5555566677777777778999999999855 57899999999999
Q ss_pred HhcC
Q 011425 281 NVLH 284 (486)
Q Consensus 281 ~~l~ 284 (486)
+...
T Consensus 301 ~~~~ 304 (319)
T 3lcr_A 301 EAHA 304 (319)
T ss_dssp HHHC
T ss_pred hccc
Confidence 8653
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=157.38 Aligned_cols=165 Identities=13% Similarity=0.080 Sum_probs=121.9
Q ss_pred CCCcEEEEeCCCCCCh-hhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~-~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
+++|+|||+||++++. ..|......+...+ +.+|++|++.. . .+++.+.+..+.+..+ ++++|+|
T Consensus 15 g~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~-------~---~~~~~~~~~~~~~~~~-~~~~l~G 80 (191)
T 3bdv_A 15 SQQLTMVLVPGLRDSDDEHWQSHWERRFPHW---QRIRQREWYQA-------D---LDRWVLAIRRELSVCT-QPVILIG 80 (191)
T ss_dssp HTTCEEEEECCTTCCCTTSHHHHHHHHCTTS---EECCCSCCSSC-------C---HHHHHHHHHHHHHTCS-SCEEEEE
T ss_pred CCCceEEEECCCCCCchhhHHHHHHHhcCCe---EEEeccCCCCc-------C---HHHHHHHHHHHHHhcC-CCeEEEE
Confidence 4578999999999887 66766666554433 56788886521 1 3444444444434434 8999999
Q ss_pred EcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCC
Q 011425 143 RSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP 221 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (486)
|||||.+++.+|..+|+ |+++|+++|+..... ..+. ...+.
T Consensus 81 ~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~-----------~~~~---------------------------~~~~~ 122 (191)
T 3bdv_A 81 HSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF-----------EIDD---------------------------RIQAS 122 (191)
T ss_dssp ETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG-----------TCTT---------------------------TSCSS
T ss_pred EChHHHHHHHHHHhcCCCccEEEEECCCccccc-----------cCcc---------------------------ccccc
Confidence 99999999999999997 999999999865321 0000 03456
Q ss_pred CCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCC-----hHHHHHHHHHHHHHh
Q 011425 222 KTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSR-----PQFYYDSVSIFFYNV 282 (486)
Q Consensus 222 ~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~-----p~~~~~~I~~FL~~~ 282 (486)
.+++|+++++|++|.++|++.++.+.+.+ ..+++++++ ||.... ..+..+.|.+||.+.
T Consensus 123 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 123 PLSVPTLTFASHNDPLMSFTRAQYWAQAW--DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp CCSSCEEEEECSSBTTBCHHHHHHHHHHH--TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEecCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 78899999999999999999999999887 567888887 998652 244558899999875
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-18 Score=165.10 Aligned_cols=227 Identities=13% Similarity=0.127 Sum_probs=144.3
Q ss_pred EEEEE-EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH---HHHHhccCCeEEEEEcCCCCCCCC--CC-
Q 011425 38 QDLEI-RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSD--GD- 110 (486)
Q Consensus 38 ~~i~~-~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~S~--~~- 110 (486)
+.+.+ ....|..+.+.+|+|.+.. .++.|+||++||++++...|.. +...+...||.|+++|.+++|... ..
T Consensus 23 ~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~ 101 (283)
T 4b6g_A 23 QVWAHHAQTLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDA 101 (283)
T ss_dssp EEEEEEETTTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSS
T ss_pred EEEEEechhhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEecccccccccccccc
Confidence 33444 4557899999999998543 5678999999999998877743 345566779999999986444321 10
Q ss_pred ---------CCC---CC----cchHHH-HHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 111 ---------YVS---LG----WHEKDD-LKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 111 ---------~~~---~~----~~~~~D-l~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
+.. .. ...... +.+++.++.+.+.. ++++|+||||||.+|+.+|..+|+ ++++++++|...
T Consensus 102 ~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 102 YDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp TTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred ccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 000 00 010122 23455666655443 789999999999999999999998 999999999776
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC--CCCCEEEEEeCCCCCCCHHH-HHHHHH
Q 011425 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIPALFGHASEDKFIRARH-SDLIFN 248 (486)
Q Consensus 172 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~-~~~l~~ 248 (486)
....... ...+...+... .......++...+.. ..+|+++++|+.|.+++... +..+.+
T Consensus 182 ~~~~~~~-----------------~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~ 243 (283)
T 4b6g_A 182 PSLVPWG-----------------EKAFTAYLGKD-REKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIE 243 (283)
T ss_dssp GGGSHHH-----------------HHHHHHHHCSC-GGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHH
T ss_pred cccCcch-----------------hhhHHhhcCCc-hHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHH
Confidence 4221000 00011111100 000111122222222 34699999999999998621 344444
Q ss_pred H---cCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhc
Q 011425 249 A---YAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 249 ~---l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l 283 (486)
. ....+++++++| +|.......+...+++|+.+.+
T Consensus 244 ~l~~~g~~~~~~~~~g~~H~~~~~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 244 TCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFL 282 (283)
T ss_dssp HHHHHTCCCEEEEETTCCSSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCCceEEEeCCCCcCHhHHHHHHHHHHHHHHHhc
Confidence 3 345789999999 9986655677788888988776
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=177.14 Aligned_cols=138 Identities=15% Similarity=0.192 Sum_probs=112.2
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH--------------H----HHHHHhccCCeE
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA--------------N----EAAVILLPSNIT 95 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~--------------~----~~~~~L~~~Gy~ 95 (486)
.|..+.+.+.+.+|..|.++++.|.+. .++.|+||++||++++...+ . .++..|+++||.
T Consensus 84 g~~~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~ 161 (391)
T 3g8y_A 84 GYILEKWEFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYV 161 (391)
T ss_dssp TEEEEEEEECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCE
T ss_pred CEEEEEEEEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCE
Confidence 456688999999999999999999742 46789999999999876532 2 577889999999
Q ss_pred EEEEcCCCCCCCCCCCCC-----CCcc----------------hHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHH
Q 011425 96 LFTLDFSGSGLSDGDYVS-----LGWH----------------EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLL 152 (486)
Q Consensus 96 Vv~~D~rG~G~S~~~~~~-----~~~~----------------~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~ 152 (486)
|+++|+||+|.+.+.... .... .+.|+.++++++.++... .+|+|+||||||.+++.
T Consensus 162 Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~ 241 (391)
T 3g8y_A 162 AVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMV 241 (391)
T ss_dssp EEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHH
Confidence 999999999998754211 1111 126888999999987554 68999999999999999
Q ss_pred HHhcCCCccEEEEcCCccCHH
Q 011425 153 YGAEDPSIAGMVLDSAFSDLF 173 (486)
Q Consensus 153 ~A~~~p~v~~lVl~sp~~~~~ 173 (486)
+|+..++|+++|+.+++....
T Consensus 242 ~a~~~~~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 242 LGVLDKDIYAFVYNDFLCQTQ 262 (391)
T ss_dssp HHHHCTTCCEEEEESCBCCHH
T ss_pred HHHcCCceeEEEEccCCCCcc
Confidence 999998999999998887753
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-19 Score=182.11 Aligned_cols=140 Identities=18% Similarity=0.275 Sum_probs=112.8
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH------------------HHHHHhccCCe
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN------------------EAAVILLPSNI 94 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~------------------~~~~~L~~~Gy 94 (486)
..|..+.+.+...+|..|.+++|.|.+. .++.|+||++||++++...+. .++..|+++||
T Consensus 88 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy 165 (398)
T 3nuz_A 88 EGYRLEKWEFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGY 165 (398)
T ss_dssp SSEEEEEEEECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTC
T ss_pred CCEEEEEEEEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCC
Confidence 3456688999999999999999999742 467899999999998766432 57889999999
Q ss_pred EEEEEcCCCCCCCCCCCCC-----------------CC--c--chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHH
Q 011425 95 TLFTLDFSGSGLSDGDYVS-----------------LG--W--HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSL 151 (486)
Q Consensus 95 ~Vv~~D~rG~G~S~~~~~~-----------------~~--~--~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl 151 (486)
.|+++|+||+|.+.+.... .+ + ..+.|+.++++|+.++... .+|+|+||||||.+++
T Consensus 166 ~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~ 245 (398)
T 3nuz_A 166 IAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMM 245 (398)
T ss_dssp EEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHH
Confidence 9999999999998754310 11 0 1247888999999887544 6899999999999999
Q ss_pred HHHhcCCCccEEEEcCCccCHHH
Q 011425 152 LYGAEDPSIAGMVLDSAFSDLFD 174 (486)
Q Consensus 152 ~~A~~~p~v~~lVl~sp~~~~~~ 174 (486)
.+++..++|+++|..+++..+..
T Consensus 246 ~~aa~~~~i~a~v~~~~~~~~~~ 268 (398)
T 3nuz_A 246 VLGTLDTSIYAFVYNDFLCQTQE 268 (398)
T ss_dssp HHHHHCTTCCEEEEESCBCCHHH
T ss_pred HHHhcCCcEEEEEEecccccchh
Confidence 99999999999999887776544
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.7e-18 Score=163.50 Aligned_cols=204 Identities=16% Similarity=0.173 Sum_probs=140.9
Q ss_pred EEEEEEc-CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH-------HHHHHhccC----CeEEEEEcCCCCC
Q 011425 38 QDLEIRN-ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-------EAAVILLPS----NITLFTLDFSGSG 105 (486)
Q Consensus 38 ~~i~~~~-~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~-------~~~~~L~~~----Gy~Vv~~D~rG~G 105 (486)
+.+.+.+ .+|..+.+.+|+|.+....++.|+||++||++++...|. .++..|+.. ||.|+++|+++++
T Consensus 33 ~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~ 112 (268)
T 1jjf_A 33 VNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAG 112 (268)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCC
T ss_pred EEEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCC
Confidence 4555654 468899999999986544567899999999998765543 346667665 5999999999887
Q ss_pred CCCCCCCCCCcch-HHH-HHHHHHHHHhcCCC----CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH
Q 011425 106 LSDGDYVSLGWHE-KDD-LKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE 178 (486)
Q Consensus 106 ~S~~~~~~~~~~~-~~D-l~~~i~~l~~~~~~----~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~ 178 (486)
..... .+.. .++ +.++++++.+.+.. .+++|+||||||.+++.++..+|+ ++++|+++|........
T Consensus 113 ~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~-- 186 (268)
T 1jjf_A 113 PGIAD----GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNE-- 186 (268)
T ss_dssp TTCSC----HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHH--
T ss_pred ccccc----cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCchh--
Confidence 54211 1111 233 56777888766543 689999999999999999999998 99999999875421100
Q ss_pred HHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCC-EEEEEeCCCCCCCHHHHHHHHHHc---CCCc
Q 011425 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP-ALFGHASEDKFIRARHSDLIFNAY---AGDK 254 (486)
Q Consensus 179 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~vp~~~~~~l~~~l---~~~~ 254 (486)
. .++.... . .....| ++++||+.|.+++. .+.+++.+ +...
T Consensus 187 --~----~~~~~~~----------------------~-----~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~ 231 (268)
T 1jjf_A 187 --R----LFPDGGK----------------------A-----AREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINH 231 (268)
T ss_dssp --H----HCTTTTH----------------------H-----HHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCC
T ss_pred --h----hcCcchh----------------------h-----hhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCce
Confidence 0 0000000 0 011244 99999999999885 34444443 3467
Q ss_pred EEEEeCC-CCCCCChHHHHHHHHHHHHHh
Q 011425 255 NIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 255 ~l~~~~g-gH~~~~p~~~~~~I~~FL~~~ 282 (486)
+++++++ +|...........+.+||.+.
T Consensus 232 ~~~~~~g~~H~~~~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 232 VYWLIQGGGHDFNVWKPGLWNFLQMADEA 260 (268)
T ss_dssp EEEEETTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCcCHhHHHHHHHHHHHHHHhc
Confidence 8999997 998654445567788888775
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-18 Score=170.13 Aligned_cols=207 Identities=12% Similarity=0.059 Sum_probs=132.6
Q ss_pred CCCCCcEEEEeCCCCCCh--hhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH-HHHHHHHhcCCCCcE
Q 011425 62 EDTPLPCVVYCHGNSGCR--ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK-VVVSYLRGNKQTSRI 138 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~--~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~-~~i~~l~~~~~~~~i 138 (486)
..+..|+|||+||++++. ..|..++..|.. +|.|+++|+||||.|.... .. ++++. .+++.+.+..+..++
T Consensus 63 ~~~~~~~lvllhG~~~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~---~~~~a~~~~~~l~~~~~~~~~ 136 (300)
T 1kez_A 63 DGPGEVTVICCAGTAAISGPHEFTRLAGALRG-IAPVRAVPQPGYEEGEPLP--SS---MAAVAAVQADAVIRTQGDKPF 136 (300)
T ss_dssp CCSCSSEEEECCCSSTTCSTTTTHHHHHHTSS-SCCBCCCCCTTSSTTCCBC--SS---HHHHHHHHHHHHHHHCSSCCE
T ss_pred CCCCCCeEEEECCCcccCcHHHHHHHHHhcCC-CceEEEecCCCCCCCCCCC--CC---HHHHHHHHHHHHHHhcCCCCE
Confidence 345679999999999977 889888888876 5999999999999986432 12 33333 334456565567899
Q ss_pred EEEEEcchHHHHHHHHhcCC----CccEEEEcCCccCHHH-HHHHHHHHHhh-hCCc----hhHHHHHHHHHHHHhhhhc
Q 011425 139 GLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFSDLFD-LMLELVDVYKI-RLPK----FTVKMAVQYMRRVIQKKAK 208 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~p----~v~~lVl~sp~~~~~~-~~~~~~~~~~~-~~p~----~~~~~~~~~~~~~~~~~~~ 208 (486)
+|+||||||.+++.+|..+| .|+++|+++++..... ....+...... .... ..... ...+......
T Consensus 137 ~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--- 212 (300)
T 1kez_A 137 VVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTR-LTALGAYDRL--- 212 (300)
T ss_dssp EEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHH-HHHHHHHHHH---
T ss_pred EEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHH-HHHHHHHHHH---
Confidence 99999999999999999987 3999999998754322 11111111100 0000 00000 0001110000
Q ss_pred ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC---ChHHHHHHHHHHHHHhcCC
Q 011425 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS---RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 209 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~---~p~~~~~~I~~FL~~~l~~ 285 (486)
+ .. .....+++|+|+|+|. |.++++.. ..+.+.++...+++++++||+.+ .++.+.+.|.+||.+....
T Consensus 213 ~--~~----~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~ggH~~~~~e~~~~~~~~i~~fl~~~~~~ 284 (300)
T 1kez_A 213 T--GQ----WRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLGGGNSS 284 (300)
T ss_dssp T--TT----CCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESSCTTTSSSSCSHHHHHHHHHHHTCC---
T ss_pred H--hc----CCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecCCChhhccccHHHHHHHHHHHHHhccCC
Confidence 0 00 1236789999999995 55655543 23333344467899999999865 5889999999999876554
Q ss_pred C
Q 011425 286 P 286 (486)
Q Consensus 286 ~ 286 (486)
+
T Consensus 285 ~ 285 (300)
T 1kez_A 285 S 285 (300)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.9e-16 Score=156.65 Aligned_cols=245 Identities=15% Similarity=0.101 Sum_probs=149.3
Q ss_pred EEEEEc--CCC--cEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh--------HHHHHHHhc-cCCeEEEEEcCCCCC
Q 011425 39 DLEIRN--ARG--HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--------ANEAAVILL-PSNITLFTLDFSGSG 105 (486)
Q Consensus 39 ~i~~~~--~dG--~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--------~~~~~~~L~-~~Gy~Vv~~D~rG~G 105 (486)
.+.|.+ .+| ..+.+++++|.+. .++.|+|++.||..+.... ...++..|+ .+||.|+++|+||+|
T Consensus 45 ~i~Y~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G 122 (377)
T 4ezi_A 45 KINYKTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLG 122 (377)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTST
T ss_pred EEEEEEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCC
Confidence 444444 345 4578999999752 3678999999999753221 123455677 899999999999999
Q ss_pred CCCCCCCCCC--cchHHHHHHHHHH---HHhcCC---CCcEEEEEEcchHHHHHHHHhcC----CC--ccEEEEcCCccC
Q 011425 106 LSDGDYVSLG--WHEKDDLKVVVSY---LRGNKQ---TSRIGLWGRSMGAVTSLLYGAED----PS--IAGMVLDSAFSD 171 (486)
Q Consensus 106 ~S~~~~~~~~--~~~~~Dl~~~i~~---l~~~~~---~~~i~LvGhSmGG~lAl~~A~~~----p~--v~~lVl~sp~~~ 171 (486)
.|.+....+. .....++.+.++. +....+ ..+++++||||||.+++.+|... |+ +.+++..+++.+
T Consensus 123 ~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~d 202 (377)
T 4ezi_A 123 DNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYG 202 (377)
T ss_dssp TCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCC
T ss_pred CCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccC
Confidence 9986332221 1112222222222 222222 27999999999999999998764 33 899999999988
Q ss_pred HHHHHHHHHH------------------HHhhhCCchhH---HHHHHHHHHHHh----------hh-h-ccccc--c---
Q 011425 172 LFDLMLELVD------------------VYKIRLPKFTV---KMAVQYMRRVIQ----------KK-A-KFDIM--D--- 213 (486)
Q Consensus 172 ~~~~~~~~~~------------------~~~~~~p~~~~---~~~~~~~~~~~~----------~~-~-~~~~~--~--- 213 (486)
+...+..+.. .+....|.... ......+..... .. . ...+. .
T Consensus 203 l~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
T 4ezi_A 203 WEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSN 282 (377)
T ss_dssp HHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHH
T ss_pred HHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhh
Confidence 7665443321 01111221100 000011111100 00 0 00000 0
Q ss_pred -----cch-----hh----hCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC--CcEEEEeCC---CCCCCChHHHHHH
Q 011425 214 -----LNC-----LK----LAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG--DKNIIKFDG---DHNSSRPQFYYDS 274 (486)
Q Consensus 214 -----~~~-----~~----~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~--~~~l~~~~g---gH~~~~p~~~~~~ 274 (486)
.++ +. .-..+++|+|++||..|.+||++.+..+++.+.. .++++.+++ +|... .......
T Consensus 283 ~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~v~~~~~~~~~~~H~~~-~~~~~~~ 361 (377)
T 4ezi_A 283 GIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKSVSDALDHVQA-HPFVLKE 361 (377)
T ss_dssp HHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCSCEEEEESCSSCCTTTT-HHHHHHH
T ss_pred hcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEcCCCCCCccCh-HHHHHHH
Confidence 000 00 1124789999999999999999999999988742 178888887 56643 4567788
Q ss_pred HHHHHHHhcCCC
Q 011425 275 VSIFFYNVLHPP 286 (486)
Q Consensus 275 I~~FL~~~l~~~ 286 (486)
+.+||++++...
T Consensus 362 ~~~wl~~~~~~~ 373 (377)
T 4ezi_A 362 QVDFFKQFERQE 373 (377)
T ss_dssp HHHHHHHHHTSS
T ss_pred HHHHHHHhhcch
Confidence 999999988753
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.6e-17 Score=156.60 Aligned_cols=226 Identities=17% Similarity=0.136 Sum_probs=139.7
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhH-HHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~-~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~ 117 (486)
+...+|..+. +|.|.. ++.|+|||+||+| ++...+ ..+...+.+.||.|+++|||+.+... + ..
T Consensus 9 ~~~~~~~~~~--~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~~-----~-p~ 76 (274)
T 2qru_A 9 QTLANGATVT--IYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTK-----I-DH 76 (274)
T ss_dssp EECTTSCEEE--EECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTSC-----H-HH
T ss_pred ccccCCeeEE--EEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCCC-----C-cH
Confidence 4445676664 566642 4679999999998 666555 45667788889999999999865321 1 12
Q ss_pred hHHHHHHHHHHHHhcCC-CCcEEEEEEcchHHHHHHHHh---cCCC-ccEEEEcCCccCHHHHHHHHH-------HHHhh
Q 011425 118 EKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGA---EDPS-IAGMVLDSAFSDLFDLMLELV-------DVYKI 185 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~-~~~i~LvGhSmGG~lAl~~A~---~~p~-v~~lVl~sp~~~~~~~~~~~~-------~~~~~ 185 (486)
.++|+.++++|+.++.. .++++|+|+|+||.+|+.++. ..+. ++++|+++|..+......... .....
T Consensus 77 ~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T 2qru_A 77 ILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKEIA 156 (274)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGGGT
T ss_pred HHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHHHh
Confidence 37999999999987755 689999999999999999987 2343 899998877654110000000 00000
Q ss_pred hC-------Cc-h--hHHHH--HH---HHHHHHhhhhcccccccch-hhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHH
Q 011425 186 RL-------PK-F--TVKMA--VQ---YMRRVIQKKAKFDIMDLNC-LKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249 (486)
Q Consensus 186 ~~-------p~-~--~~~~~--~~---~~~~~~~~~~~~~~~~~~~-~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 249 (486)
.. .. + ..... .. .+................. ...+..+ .|+||++|+.|.+++...+.++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~~ 235 (274)
T 2qru_A 157 AIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIGRT 235 (274)
T ss_dssp TSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred hhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHHHh
Confidence 00 00 0 00000 00 0000000000000000000 0123445 7999999999999999989999988
Q ss_pred cCCCcEEEEeCC-CCCCC--C--h--HHHHHHHHHHHHH
Q 011425 250 YAGDKNIIKFDG-DHNSS--R--P--QFYYDSVSIFFYN 281 (486)
Q Consensus 250 l~~~~~l~~~~g-gH~~~--~--p--~~~~~~I~~FL~~ 281 (486)
+.. .+++++++ +|.+. . + .++.+.+.+||.+
T Consensus 236 ~~~-~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 236 IPE-STFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp STT-CEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred CCC-cEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 754 68888988 99864 1 2 3567788888864
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.9e-17 Score=159.39 Aligned_cols=182 Identities=19% Similarity=0.117 Sum_probs=130.1
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccC--CeEEEEEcCC------CCCCCCCCCC---CCCc--------chHHHH
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFS------GSGLSDGDYV---SLGW--------HEKDDL 122 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~--Gy~Vv~~D~r------G~G~S~~~~~---~~~~--------~~~~Dl 122 (486)
.+++.|+|||+||+|++...|..+++.|..+ ++.+++++-| |.|.+-.+.. .... ....++
T Consensus 62 ~~~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l 141 (285)
T 4fhz_A 62 PGEATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDL 141 (285)
T ss_dssp TTCCSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHH
Confidence 4567899999999999999998888888764 7899998754 2332210000 0000 013345
Q ss_pred HHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHH
Q 011425 123 KVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYM 199 (486)
Q Consensus 123 ~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 199 (486)
.++++.+....++ ++|+|+|+|+||.+++.++..+|+ +.++|.+++........
T Consensus 142 ~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~----------------------- 198 (285)
T 4fhz_A 142 DAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERL----------------------- 198 (285)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHH-----------------------
T ss_pred HHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhh-----------------------
Confidence 5566666555444 789999999999999999999998 99999988765321100
Q ss_pred HHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCCChHHHHHHH
Q 011425 200 RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSV 275 (486)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~p~~~~~~I 275 (486)
......++|+|++||+.|++||++.++++++.+. ..++++++++ ||... .+.++.+
T Consensus 199 ------------------~~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~--~~~l~~~ 258 (285)
T 4fhz_A 199 ------------------AEEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA--PDGLSVA 258 (285)
T ss_dssp ------------------HHHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC--HHHHHHH
T ss_pred ------------------hhhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC--HHHHHHH
Confidence 0011345799999999999999999888877654 4678899998 99864 3456789
Q ss_pred HHHHHHhcCCC
Q 011425 276 SIFFYNVLHPP 286 (486)
Q Consensus 276 ~~FL~~~l~~~ 286 (486)
.+||+++|...
T Consensus 259 ~~fL~~~Lpd~ 269 (285)
T 4fhz_A 259 LAFLKERLPDA 269 (285)
T ss_dssp HHHHHHHCC--
T ss_pred HHHHHHHCcCC
Confidence 99999998543
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-19 Score=168.23 Aligned_cols=201 Identities=13% Similarity=0.112 Sum_probs=124.0
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC---CcEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT---SRIGL 140 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~---~~i~L 140 (486)
+..+.||++||++++...|..++..|.+ +|.|+++|+||||.|.... .+|+.++++.+.+..+. ++++|
T Consensus 11 ~~~~~lv~lhg~g~~~~~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~l 82 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSASFRPLHAFLQG-ECEMLAAEPPGHGTNQTSA-------IEDLEELTDLYKQELNLRPDRPFVL 82 (242)
T ss_dssp TCCCEEESSCCCCHHHHHHHHHHHHHCC-SCCCEEEECCSSCCSCCCT-------TTHHHHHHHHTTTTCCCCCCSSCEE
T ss_pred CCCceEEEECCCCCCHHHHHHHHHhCCC-CeEEEEEeCCCCCCCCCCC-------cCCHHHHHHHHHHHHHhhcCCCEEE
Confidence 5678899999999999999999998876 6999999999999996421 35677777766555444 68999
Q ss_pred EEEcchHHHHHHHHhc------CCCccEEEEcC---CccCHH---H-HHHHHHHHHh--hhCCchh-H-HHHHH----HH
Q 011425 141 WGRSMGAVTSLLYGAE------DPSIAGMVLDS---AFSDLF---D-LMLELVDVYK--IRLPKFT-V-KMAVQ----YM 199 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~------~p~v~~lVl~s---p~~~~~---~-~~~~~~~~~~--~~~p~~~-~-~~~~~----~~ 199 (486)
+||||||.+|+.+|.+ +|+ .+++.+ +..... . ........+. ...+... . ..... .+
T Consensus 83 vGhSmGG~iA~~~A~~~~~~~~~p~--~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (242)
T 2k2q_B 83 FGHSMGGMITFRLAQKLEREGIFPQ--AVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSF 160 (242)
T ss_dssp ECCSSCCHHHHHHHHHHHHHHCSSC--SEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTCCSCH
T ss_pred EeCCHhHHHHHHHHHHHHHcCCCCC--EEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHH
Confidence 9999999999999986 454 233322 111000 0 0000010000 0000000 0 00000 00
Q ss_pred HHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHH
Q 011425 200 RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSI 277 (486)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~ 277 (486)
...+.... .... ..+..+++|+|+++|++|.+++ .....+.+..+ ...++++++||+.. .|+++.+.|.+
T Consensus 161 ~~~~~~~~-----~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~ 232 (242)
T 2k2q_B 161 RSDYRALE-----QFEL-YDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAK-DITFHQFDGGHMFLLSQTEEVAERIFA 232 (242)
T ss_dssp HHHHHHHT-----CCCC-SCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCC-CSEEEEEECCCSHHHHHCHHHHHHHHH
T ss_pred HHHHHHHH-----hccc-CCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhc-CCeEEEEeCCceeEcCCHHHHHHHHHH
Confidence 00000000 0011 1256789999999999999864 33444444343 34577788899866 68899999999
Q ss_pred HHHHh
Q 011425 278 FFYNV 282 (486)
Q Consensus 278 FL~~~ 282 (486)
||.+.
T Consensus 233 fl~~~ 237 (242)
T 2k2q_B 233 ILNQH 237 (242)
T ss_dssp HHHTT
T ss_pred Hhhcc
Confidence 99764
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-17 Score=168.04 Aligned_cols=177 Identities=15% Similarity=0.174 Sum_probs=129.9
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC-----------------C-C---c------
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-----------------L-G---W------ 116 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-----------------~-~---~------ 116 (486)
++.|+|||+||++++...|..++..|+++||.|+++|+||+|.+.+.... . + +
T Consensus 96 ~~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 175 (383)
T 3d59_A 96 EKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQ 175 (383)
T ss_dssp SCEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHH
Confidence 46899999999999999999999999999999999999999887531000 0 0 0
Q ss_pred --chHHHHHHHHHHHHhc--------------------C--CCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCH
Q 011425 117 --HEKDDLKVVVSYLRGN--------------------K--QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDL 172 (486)
Q Consensus 117 --~~~~Dl~~~i~~l~~~--------------------~--~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~ 172 (486)
..++|+..+++++.+. . +..+|+++||||||.+++.++...++|+++|++++....
T Consensus 176 ~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~v~a~v~~~~~~~p 255 (383)
T 3d59_A 176 VRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFP 255 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCCTT
T ss_pred HHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCCCccEEEEeCCccCC
Confidence 0146788888888651 1 126899999999999999999998889999999876420
Q ss_pred HHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc--
Q 011425 173 FDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY-- 250 (486)
Q Consensus 173 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l-- 250 (486)
.. ...+.++++|+|+++|++|..+ .....+ +.+
T Consensus 256 --------------~~----------------------------~~~~~~i~~P~Lii~g~~D~~~--~~~~~~-~~l~~ 290 (383)
T 3d59_A 256 --------------LG----------------------------DEVYSRIPQPLFFINSEYFQYP--ANIIKM-KKCYS 290 (383)
T ss_dssp --------------CC----------------------------GGGGGSCCSCEEEEEETTTCCH--HHHHHH-HTTCC
T ss_pred --------------Cc----------------------------hhhhccCCCCEEEEecccccch--hhHHHH-HHHHh
Confidence 00 0122467799999999999864 233333 333
Q ss_pred -CCCcEEEEeCC-CCCCC---------------------Ch----HHHHHHHHHHHHHhcCC
Q 011425 251 -AGDKNIIKFDG-DHNSS---------------------RP----QFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 251 -~~~~~l~~~~g-gH~~~---------------------~p----~~~~~~I~~FL~~~l~~ 285 (486)
....+++++++ +|... .+ +.+.+.+.+||++++..
T Consensus 291 ~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~ 352 (383)
T 3d59_A 291 PDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGL 352 (383)
T ss_dssp TTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCC
Confidence 24578888998 99751 23 23445789999999865
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.2e-17 Score=157.65 Aligned_cols=204 Identities=10% Similarity=0.067 Sum_probs=126.2
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
+..++||++||++++...|..++. | ..+|.|+++|+||+|.+.... ... .+.+..+++.+.......+++|+||
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~~~~~-l-~~~~~v~~~d~~G~~~~~~~~--~~~--~~~~~~~~~~i~~~~~~~~~~l~Gh 92 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYASLPR-L-KSDTAVVGLNCPYARDPENMN--CTH--GAMIESFCNEIRRRQPRGPYHLGGW 92 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGTTSCC-C-SSSEEEEEEECTTTTCGGGCC--CCH--HHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHh-c-CCCCEEEEEECCCCCCCCCCC--CCH--HHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 467899999999999999988887 6 568999999999997665322 222 1223333444444333468999999
Q ss_pred cchHHHHHHHHh---cCCC-ccEEEEcCCccCH-----HHHHHHHHHHHhhhCC---------chhHHHHHHHHHHHHhh
Q 011425 144 SMGAVTSLLYGA---EDPS-IAGMVLDSAFSDL-----FDLMLELVDVYKIRLP---------KFTVKMAVQYMRRVIQK 205 (486)
Q Consensus 144 SmGG~lAl~~A~---~~p~-v~~lVl~sp~~~~-----~~~~~~~~~~~~~~~p---------~~~~~~~~~~~~~~~~~ 205 (486)
||||.+++.+|. ..+. |.++|++++.... ......+......... ..........+...+..
T Consensus 93 S~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
T 3ils_A 93 SSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVVDV 172 (265)
T ss_dssp THHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSCSCCCTTHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHHHHHH
Confidence 999999999997 5565 9999998765321 1111122111110000 00000111111111111
Q ss_pred hhcccccccchhhhCCCCCCCEE-EEEeCC---CCCC--------------CHHHHHHHHHHcC-CCcEEEEeCC-CCCC
Q 011425 206 KAKFDIMDLNCLKLAPKTFIPAL-FGHASE---DKFI--------------RARHSDLIFNAYA-GDKNIIKFDG-DHNS 265 (486)
Q Consensus 206 ~~~~~~~~~~~~~~l~~i~~PvL-ii~G~~---D~~v--------------p~~~~~~l~~~l~-~~~~l~~~~g-gH~~ 265 (486)
...+.. .....+++|++ +++|++ |..+ +......+.+..+ .+.+++.++| ||+.
T Consensus 173 ~~~~~~------~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~ 246 (265)
T 3ils_A 173 MLDYKL------APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFT 246 (265)
T ss_dssp TTTCCC------CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTG
T ss_pred HHhcCC------CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcce
Confidence 111111 12346889988 999999 9988 3333444555555 4778999998 9986
Q ss_pred C----ChHHHHHHHHHHH
Q 011425 266 S----RPQFYYDSVSIFF 279 (486)
Q Consensus 266 ~----~p~~~~~~I~~FL 279 (486)
+ .++++.+.|.+||
T Consensus 247 ~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 247 LMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp GGSTTTTHHHHHHHHHHT
T ss_pred eeChhhHHHHHHHHHHHh
Confidence 5 5678888888776
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.8e-16 Score=148.02 Aligned_cols=206 Identities=14% Similarity=0.160 Sum_probs=130.1
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccC--CeEEEEEcCCCC-----
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGS----- 104 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~--Gy~Vv~~D~rG~----- 104 (486)
|+.+..+.+.|.+ ..+.+.++.|. ++.+++|||+||+|++..++..++..|... ++.+++++-+-.
T Consensus 10 ~~d~~~~~~~~~~---~~l~y~ii~P~----~~~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~ 82 (246)
T 4f21_A 10 GVDLGTENLYFQS---NAMNYELMEPA----KQARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTIN 82 (246)
T ss_dssp ----------------CCCCEEEECCS----SCCCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTH
T ss_pred ccccccceEEEec---CCcCceEeCCC----CcCCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccC
Confidence 3444445555543 34667777774 356789999999999999988888777543 688898876421
Q ss_pred ---------CCCCCCCCC-------CCc-chHHHHHHHHHHHHhc-CCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEE
Q 011425 105 ---------GLSDGDYVS-------LGW-HEKDDLKVVVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVL 165 (486)
Q Consensus 105 ---------G~S~~~~~~-------~~~-~~~~Dl~~~i~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl 165 (486)
......... .+. ..++.+..+++...+. .+.++|+|+|+|+||++++.++..+|. +.++|.
T Consensus 83 ~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~ 162 (246)
T 4f21_A 83 MGMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMA 162 (246)
T ss_dssp HHHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEE
T ss_pred CCCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCcccccccee
Confidence 111100000 001 1123344444444333 233799999999999999999999998 999999
Q ss_pred cCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHH
Q 011425 166 DSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (486)
Q Consensus 166 ~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 245 (486)
+++.......... . .......+|++++||+.|++||++.+++
T Consensus 163 ~sG~lp~~~~~~~------------------------------------~--~~~~~~~~Pvl~~HG~~D~vVp~~~~~~ 204 (246)
T 4f21_A 163 LSTYLPAWDNFKG------------------------------------K--ITSINKGLPILVCHGTDDQVLPEVLGHD 204 (246)
T ss_dssp ESCCCTTHHHHST------------------------------------T--CCGGGTTCCEEEEEETTCSSSCHHHHHH
T ss_pred hhhccCccccccc------------------------------------c--ccccccCCchhhcccCCCCccCHHHHHH
Confidence 9987643221000 0 0001235799999999999999999888
Q ss_pred HHHHcC---CCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 246 IFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 246 l~~~l~---~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
+.+.+. ..+++..+++ ||... .+..+.+.+||.+.|+
T Consensus 205 ~~~~L~~~g~~v~~~~y~g~gH~i~--~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 205 LSDKLKVSGFANEYKHYVGMQHSVC--MEEIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHTTTCCEEEEEESSCCSSCC--HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCeEEEEECCCCCccC--HHHHHHHHHHHHHHhC
Confidence 888764 3678889998 99764 3446789999999875
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=152.06 Aligned_cols=191 Identities=12% Similarity=0.082 Sum_probs=134.2
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCC---eEEEEEcCCCCCCC--CCCCC-----C----------CCc----chHHH
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSN---ITLFTLDFSGSGLS--DGDYV-----S----------LGW----HEKDD 121 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~G---y~Vv~~D~rG~G~S--~~~~~-----~----------~~~----~~~~D 121 (486)
.++|||+||++++...|..++..|.+.| +.|+.+|++++|.. .+... + .++ ..+++
T Consensus 4 ~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~ 83 (250)
T 3lp5_A 4 MAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVW 83 (250)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHH
Confidence 4689999999999999999999998876 78888888877752 22110 0 111 12688
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-----CC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-----PS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 122 l~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-----p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
+.++++++.+.++..++.|+||||||.+++.++..+ +. |+++|+++++...... .+.......
T Consensus 84 l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~-----------~~~~~~~~~ 152 (250)
T 3lp5_A 84 LNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMEST-----------STTAKTSMF 152 (250)
T ss_dssp HHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCC-----------CSSCCCHHH
T ss_pred HHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccc-----------cccccCHHH
Confidence 999999999988889999999999999999999876 44 9999999887653211 011111111
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeC----CCCCCCHHHHHHHHHHcCCC-cE--EEEeCC---CCCC
Q 011425 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHAS----EDKFIRARHSDLIFNAYAGD-KN--IIKFDG---DHNS 265 (486)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~----~D~~vp~~~~~~l~~~l~~~-~~--l~~~~g---gH~~ 265 (486)
..+.. ....++. ++|+|+|+|+ .|.+||...+..+...++.. .. .+.+.+ +|..
T Consensus 153 ----~~l~~-----------~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~ 216 (250)
T 3lp5_A 153 ----KELYR-----------YRTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSD 216 (250)
T ss_dssp ----HHHHH-----------TGGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCC
T ss_pred ----HHHHh-----------ccccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhc
Confidence 11111 1123333 6899999999 99999999998888877642 22 233432 5887
Q ss_pred C-ChHHHHHHHHHHHHHhc
Q 011425 266 S-RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 266 ~-~p~~~~~~I~~FL~~~l 283 (486)
+ +..++.+.|.+||.+..
T Consensus 217 l~e~~~v~~~I~~FL~~~~ 235 (250)
T 3lp5_A 217 LPQNKQIVSLIRQYLLAET 235 (250)
T ss_dssp HHHHHHHHHHHHHHTSCCC
T ss_pred chhCHHHHHHHHHHHhccc
Confidence 6 44488899999986543
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.7e-16 Score=149.33 Aligned_cols=200 Identities=17% Similarity=0.145 Sum_probs=136.4
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCe--EEEEEcCCCCCCCC--CCCC----------------CCCcc-hHHHHH
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNI--TLFTLDFSGSGLSD--GDYV----------------SLGWH-EKDDLK 123 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy--~Vv~~D~rG~G~S~--~~~~----------------~~~~~-~~~Dl~ 123 (486)
..++|||+||++++...|..++..|.+.|| .|+.+|.+++|.+. +... ...+. .++++.
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 457899999999999999999999999886 69999999888652 2110 11111 367889
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC------CccEEEEcCCccCHHHHHHHHHH--HH-hhhCCchhHHH
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP------SIAGMVLDSAFSDLFDLMLELVD--VY-KIRLPKFTVKM 194 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p------~v~~lVl~sp~~~~~~~~~~~~~--~~-~~~~p~~~~~~ 194 (486)
++++++.+.++..++.|+||||||.+++.++..+| .|+.+|+++++............ .+ ....|......
T Consensus 85 ~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~p~~~~~~ 164 (249)
T 3fle_A 85 EVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGKPSRMNAA 164 (249)
T ss_dssp HHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCCBSSCCHH
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCCCcccCHH
Confidence 99999998888899999999999999999999875 38999999876643211000000 00 00001100000
Q ss_pred HHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeC------CCCCCCHHHHHHHHHHcCCC---cEEEEeC---CC
Q 011425 195 AVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHAS------EDKFIRARHSDLIFNAYAGD---KNIIKFD---GD 262 (486)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~------~D~~vp~~~~~~l~~~l~~~---~~l~~~~---gg 262 (486)
. ..++ .....++..++|+|.|+|. .|.+||...+..+...+.+. .+.+.+. +.
T Consensus 165 ~----~~l~-----------~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~ 229 (249)
T 3fle_A 165 Y----RQLL-----------SLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQ 229 (249)
T ss_dssp H----HHTG-----------GGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGS
T ss_pred H----HHHH-----------HHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCc
Confidence 0 1000 1123445567899999998 79999999998887777643 2233343 37
Q ss_pred CCCC-ChHHHHHHHHHHH
Q 011425 263 HNSS-RPQFYYDSVSIFF 279 (486)
Q Consensus 263 H~~~-~p~~~~~~I~~FL 279 (486)
|... +..++.+.|.+||
T Consensus 230 Hs~l~~n~~V~~~I~~FL 247 (249)
T 3fle_A 230 HSQLHENKDVANEIIQFL 247 (249)
T ss_dssp TGGGGGCHHHHHHHHHHH
T ss_pred hhccccCHHHHHHHHHHh
Confidence 8865 4568999999997
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-16 Score=151.85 Aligned_cols=202 Identities=14% Similarity=0.045 Sum_probs=130.7
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCe---EEEEEcCCCCC------CCCC---CC--------CCCCcc-hHHHHHH
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNI---TLFTLDFSGSG------LSDG---DY--------VSLGWH-EKDDLKV 124 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy---~Vv~~D~rG~G------~S~~---~~--------~~~~~~-~~~Dl~~ 124 (486)
.++|||+||++++...|..++..|.++++ .+++++..++| .+.+ .+ ...++. .++++.+
T Consensus 3 ~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~ 82 (254)
T 3ds8_A 3 QIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLKI 82 (254)
T ss_dssp CCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHHH
Confidence 46789999999999999999999988754 23333333332 2211 11 111222 2677888
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC------ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS------IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQY 198 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~------v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 198 (486)
+++.+.+.++..+++++||||||.+++.++..+|+ |+++|+++++..................|.. ...
T Consensus 83 ~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~p~~-----~~~ 157 (254)
T 3ds8_A 83 AMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKKLPNS-----TPQ 157 (254)
T ss_dssp HHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCSSCSSC-----CHH
T ss_pred HHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccccCCcc-----hHH
Confidence 88998888788999999999999999999999874 8999999987654322111000000001111 011
Q ss_pred HHHHHhhhhcccccccchhhhCCCCCCCEEEEEeC------CCCCCCHHHHHHHHHHcCCC---cEEEEeCC---CCCCC
Q 011425 199 MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHAS------EDKFIRARHSDLIFNAYAGD---KNIIKFDG---DHNSS 266 (486)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~------~D~~vp~~~~~~l~~~l~~~---~~l~~~~g---gH~~~ 266 (486)
+..... ....++. ++|++.|+|. .|.+||+..+..+...+++. .+.+.+.| +|...
T Consensus 158 ~~~~~~-----------~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l 225 (254)
T 3ds8_A 158 MDYFIK-----------NQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTL 225 (254)
T ss_dssp HHHHHH-----------TGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGG
T ss_pred HHHHHH-----------HHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcc
Confidence 111110 1122333 6899999999 99999999999988777642 22333433 58755
Q ss_pred -ChHHHHHHHHHHHHHhcC
Q 011425 267 -RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 267 -~p~~~~~~I~~FL~~~l~ 284 (486)
+.+++.+.|..||.+...
T Consensus 226 ~~~~~v~~~i~~fL~~~~~ 244 (254)
T 3ds8_A 226 HETPKSIEKTYWFLEKFKT 244 (254)
T ss_dssp GGSHHHHHHHHHHHHTCCC
T ss_pred cCCHHHHHHHHHHHHHhcC
Confidence 444699999999998753
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-16 Score=157.36 Aligned_cols=211 Identities=13% Similarity=0.044 Sum_probs=132.0
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh-HH-HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-AN-EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVV 126 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~-~~-~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i 126 (486)
.+...++.|.... .+..++|||+||++++... |. .++..|.++||.|+++|+||+|.++.. ...+++.+++
T Consensus 15 ~l~~~i~~p~~~~-~~~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~------~~~~~l~~~i 87 (317)
T 1tca_A 15 VLDAGLTCQGASP-SSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ------VNTEYMVNAI 87 (317)
T ss_dssp HHHHTEEETTBCT-TSCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH------HHHHHHHHHH
T ss_pred HHhheeeCCCCCC-CCCCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcHH------HHHHHHHHHH
Confidence 3444466675432 2456789999999999887 87 788899888999999999999876411 2257888888
Q ss_pred HHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC---C-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHH--HHHHHH
Q 011425 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP---S-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKM--AVQYMR 200 (486)
Q Consensus 127 ~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p---~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~ 200 (486)
+++.+..+..+++|+||||||.+++.++..++ . |+++|+++++........ ....+....+.. ... ...++.
T Consensus 88 ~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~-~~~~~~~~~~~~-~~~~~~s~f~~ 165 (317)
T 1tca_A 88 TALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAG-PLDALAVSAPSV-WQQTTGSALTT 165 (317)
T ss_dssp HHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGH-HHHHTTCBCHHH-HHTBTTCHHHH
T ss_pred HHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchh-hhhhhhhcCchH-HhhCcCcHHHH
Confidence 88888767789999999999999999988764 3 999999998753211100 000000000000 000 000000
Q ss_pred HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH--HHHHHHHcCCCcEEEEe------CC-CCCCC-ChHH
Q 011425 201 RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH--SDLIFNAYAGDKNIIKF------DG-DHNSS-RPQF 270 (486)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~--~~~l~~~l~~~~~l~~~------~g-gH~~~-~p~~ 270 (486)
.+. . .......+|+++|+|..|.+|++.. .......+.....+.+. ++ +|..+ ....
T Consensus 166 ~L~-~------------~~~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~a~~~~~~~~~~~~~~~gH~~~l~~p~ 232 (317)
T 1tca_A 166 ALR-N------------AGGLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFVIDHAGSLTSQF 232 (317)
T ss_dssp HHH-H------------TTTTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHHCTTCCCCTTHHHHBHH
T ss_pred HHH-h------------cCCCCCCCCEEEEEeCCCCeECCccccccchhhhccCCccEEeeeccCCCCccCcccccCCHH
Confidence 000 0 0001246899999999999998764 21112222222222221 34 89866 2334
Q ss_pred HHHHHHHHHHH
Q 011425 271 YYDSVSIFFYN 281 (486)
Q Consensus 271 ~~~~I~~FL~~ 281 (486)
++..|.+||..
T Consensus 233 ~~~~v~~~L~~ 243 (317)
T 1tca_A 233 SYVVGRSALRS 243 (317)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 56788999986
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.64 E-value=7.3e-15 Score=143.29 Aligned_cols=233 Identities=9% Similarity=-0.037 Sum_probs=135.8
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCCC--CChhhHHH---HHHHhccCCeEEEEEcCCCCC-CCCCC
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS--GCRADANE---AAVILLPSNITLFTLDFSGSG-LSDGD 110 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g--g~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G-~S~~~ 110 (486)
+.+++.+. .|..+.++ |+|.+ .|+||++||++ ++...|.. +...+...||.|+++|+++.+ .++..
T Consensus 12 ~~~~~~S~~~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~ 84 (280)
T 1r88_A 12 ENLMVPSPSMGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWE 84 (280)
T ss_dssp EEEEEEETTTTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCS
T ss_pred EEEEEECcccCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCC
Confidence 55666654 78889888 78752 38999999995 45556654 456677789999999997642 21111
Q ss_pred CCCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHH-HHHHHHHhhh
Q 011425 111 YVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM-LELVDVYKIR 186 (486)
Q Consensus 111 ~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~-~~~~~~~~~~ 186 (486)
...........+.+++.++...+.. ++++|+||||||++|+.+|.++|+ ++++|++++........ ..........
T Consensus 85 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~ 164 (280)
T 1r88_A 85 QDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQ 164 (280)
T ss_dssp SCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHHHhhh
Confidence 1111111111123455566554444 499999999999999999999998 99999999887542211 0000000000
Q ss_pred CCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC---CCCEEEEE----eCCCCC-------CCHHHHHHHHHHcC-
Q 011425 187 LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT---FIPALFGH----ASEDKF-------IRARHSDLIFNAYA- 251 (486)
Q Consensus 187 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~PvLii~----G~~D~~-------vp~~~~~~l~~~l~- 251 (486)
...+. ....+...........++...+.++ ..|+++++ |+.|.. ++...++++++.+.
T Consensus 165 ~~~~~-------~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~ 237 (280)
T 1r88_A 165 FGGVD-------TNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRS 237 (280)
T ss_dssp HHCCC-------THHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHH
T ss_pred ccccc-------hhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHH
Confidence 00000 0001111111111111222212222 47999999 999983 57888888887763
Q ss_pred ---CCcEEEEeC-CCCCCCChHHHHHHHHHHHHHhcC
Q 011425 252 ---GDKNIIKFD-GDHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 252 ---~~~~l~~~~-ggH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
.+.++.+++ ++|............+.||.+.+.
T Consensus 238 ~g~~~~~~~~~~~g~H~~~~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 238 VGGHNGHFDFPASGDNGWGSWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp TTCCSEEEECCSSCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcceEEEecCCCCcChhHHHHHHHHHHHHHHHHHh
Confidence 335677754 589755444444555566666553
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.9e-15 Score=146.93 Aligned_cols=235 Identities=13% Similarity=0.017 Sum_probs=137.8
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCC--CCChhhHHHH---HHHhccCCeEEEEEcCCCC-CCCCCC
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGN--SGCRADANEA---AVILLPSNITLFTLDFSGS-GLSDGD 110 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~--gg~~~~~~~~---~~~L~~~Gy~Vv~~D~rG~-G~S~~~ 110 (486)
+.+.+.+. .|..+.++ +.|. ..+.|+||++||+ +++...|... ...+...||.|+++|.++. +.++..
T Consensus 10 ~~~~~~S~~~~~~i~v~-~~p~----~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~ 84 (304)
T 1sfr_A 10 EYLQVPSPSMGRDIKVQ-FQSG----GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWY 84 (304)
T ss_dssp EEEEEEETTTTEEEEEE-EECC----STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCS
T ss_pred EEEEEECccCCCceEEE-ECCC----CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccC
Confidence 45556554 46677766 4443 2578999999999 5566667653 4667778999999999764 222111
Q ss_pred CC--------CCCcchHHHH-HHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH-HH
Q 011425 111 YV--------SLGWHEKDDL-KVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL-ML 177 (486)
Q Consensus 111 ~~--------~~~~~~~~Dl-~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~-~~ 177 (486)
.. ...+ ...+ .+++.++.+.+.. ++++|+||||||++|+.++..+|+ ++++|++++....... ..
T Consensus 85 ~~~~~~g~~~~~~~--~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~ 162 (304)
T 1sfr_A 85 QPACGKAGCQTYKW--ETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGP 162 (304)
T ss_dssp SCEEETTEEECCBH--HHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHH
T ss_pred CccccccccccccH--HHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccchh
Confidence 10 1111 1112 3555566553343 499999999999999999999998 9999999987653211 00
Q ss_pred HHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC---CCCEEEEEeCCCC--------------CCCH
Q 011425 178 ELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT---FIPALFGHASEDK--------------FIRA 240 (486)
Q Consensus 178 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~PvLii~G~~D~--------------~vp~ 240 (486)
............+. ....+...........++...+.++ .+|+++++|+.|. .++.
T Consensus 163 ~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~ 235 (304)
T 1sfr_A 163 TLIGLAMGDAGGYK-------ASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVR 235 (304)
T ss_dssp HHHHHHHHHTTSCC-------HHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHH
T ss_pred hhhhHhhhhccccc-------hHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHH
Confidence 00000000000000 0000100000000011111111112 4799999999998 5677
Q ss_pred HHHHHHHHHcC----CCcEEEEeC-CCCCCCChHHHHHHHHHHHHHhcCCC
Q 011425 241 RHSDLIFNAYA----GDKNIIKFD-GDHNSSRPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 241 ~~~~~l~~~l~----~~~~l~~~~-ggH~~~~p~~~~~~I~~FL~~~l~~~ 286 (486)
..++++++.+. .++++.+++ ++|...........+..||.+.+..+
T Consensus 236 ~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~~w~~~l~~~l~~l~~~l~~~ 286 (304)
T 1sfr_A 236 TSNIKFQDAYNAGGGHNGVFDFPDSGTHSWEYWGAQLNAMKPDLQRALGAT 286 (304)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECCSCCCSSHHHHHHHHHHTHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCCCceEEEecCCCccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 77777777653 356777774 68975444555667888999888653
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=144.87 Aligned_cols=202 Identities=13% Similarity=0.102 Sum_probs=125.4
Q ss_pred EEEEeCC--CCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCC---CCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 68 CVVYCHG--NSGCRADANEAAVILLPSNITLFTLDFSGSGLSDG---DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 68 ~VV~lHG--~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~---~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
+|+++|| ++++...|..++..|. .+|.|+++|+||+|.+.+ ......+ .+.+..+++.++...+.++++|+|
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~--~~~a~~~~~~i~~~~~~~p~~l~G 167 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADL--DTALDAQARAILRAAGDAPVVLLG 167 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSH--HHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCH--HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999998 6777888988888887 589999999999998721 1111222 122223334444433457899999
Q ss_pred EcchHHHHHHHHhcC----C-CccEEEEcCCccCHHHH-HHHHHHH----Hh--hhCCchhHHHHHHHHHHHHhhhhccc
Q 011425 143 RSMGAVTSLLYGAED----P-SIAGMVLDSAFSDLFDL-MLELVDV----YK--IRLPKFTVKMAVQYMRRVIQKKAKFD 210 (486)
Q Consensus 143 hSmGG~lAl~~A~~~----p-~v~~lVl~sp~~~~~~~-~~~~~~~----~~--~~~p~~~~~~~~~~~~~~~~~~~~~~ 210 (486)
|||||.+|+.+|.+. + .|.++|++++....... +..+... .. ...+... ... ..+...... +
T Consensus 168 ~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~-~~~~~~~~~---~- 241 (319)
T 2hfk_A 168 HAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSD-ARL-LAMGRYARF---L- 241 (319)
T ss_dssp ETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCH-HHH-HHHHHHHHH---H-
T ss_pred ECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccch-HHH-HHHHHHHHH---H-
Confidence 999999999999875 3 39999998876431110 1110000 00 0000000 000 000000000 0
Q ss_pred ccccchhhhCCCCCCCEEEEEeCCCCCCCHHH-HHHHHHHcCCCcEEEEeCCCCCCC---ChHHHHHHHHHHHHHhcC
Q 011425 211 IMDLNCLKLAPKTFIPALFGHASEDKFIRARH-SDLIFNAYAGDKNIIKFDGDHNSS---RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 211 ~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~l~~~l~~~~~l~~~~ggH~~~---~p~~~~~~I~~FL~~~l~ 284 (486)
.. .....+++|+++++| .|.++++.. ...+.+.+....+++.+++||+.+ .++.+.+.|.+||.+...
T Consensus 242 -~~----~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~g~H~~~~~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 242 -AG----PRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp -HS----CCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred -Hh----CCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeCCCcHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 00 123678899999999 999988764 333333344567888999999853 688999999999987654
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.57 E-value=6.8e-16 Score=150.84 Aligned_cols=212 Identities=13% Similarity=0.130 Sum_probs=126.0
Q ss_pred CcEEEEeCCCCCCh---hhHHHHHHHhccC--CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCC-CcEE
Q 011425 66 LPCVVYCHGNSGCR---ADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIG 139 (486)
Q Consensus 66 ~p~VV~lHG~gg~~---~~~~~~~~~L~~~--Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~-~~i~ 139 (486)
.++|||+||++++. ..|..++..|.+. |+.|+++|+ |+|.|............+++..+++++...... +++.
T Consensus 5 ~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 83 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYN 83 (279)
T ss_dssp SCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEE
T ss_pred CCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCCEE
Confidence 35699999999887 7899999888775 889999998 999875211110012245666666776653222 6899
Q ss_pred EEEEcchHHHHHHHHhcCCC--ccEEEEcCCccCH-------------H-HHHHHHHHH--Hhh-----hCCc-hh--HH
Q 011425 140 LWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDL-------------F-DLMLELVDV--YKI-----RLPK-FT--VK 193 (486)
Q Consensus 140 LvGhSmGG~lAl~~A~~~p~--v~~lVl~sp~~~~-------------~-~~~~~~~~~--~~~-----~~p~-~~--~~ 193 (486)
|+||||||.++..++.++|+ |+++|+++++... . ..+..+... +.. ..+. +. ..
T Consensus 84 lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~ 163 (279)
T 1ei9_A 84 AMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYNKAIQERLVQAEYWHDPI 163 (279)
T ss_dssp EEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTCBCSCTTCCSTTCHHHHHHHHHTHHHHTSHHHHHHCTGGGGBCCST
T ss_pred EEEECHHHHHHHHHHHHcCCcccceEEEecCccCCccCCCCCccccchHHHHHHHHhcccccChHHhccccccccccCch
Confidence 99999999999999999985 9999988754310 0 011111000 000 0000 00 00
Q ss_pred HHHHHHHH--HHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHH------------------------
Q 011425 194 MAVQYMRR--VIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIF------------------------ 247 (486)
Q Consensus 194 ~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~------------------------ 247 (486)
....+... .+................+..++.|++ |+|..|.++++..+..+.
T Consensus 164 ~~~~~~~~s~fl~~ln~~~~~~~~~~~~l~~l~~~~l-i~g~~D~~v~p~~s~~~~~~~~~~~~~~~~~~~~~~y~ed~~ 242 (279)
T 1ei9_A 164 REDIYRNHSIFLADINQERGVNESYKKNLMALKKFVM-VKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQDRL 242 (279)
T ss_dssp THHHHHHHCSSHHHHTTTTSCCHHHHHHHHTSSEEEE-EEETTCSSSSSGGGGGTCEECTTCSSCEECGGGSHHHHTTSS
T ss_pred hHHHHHhcCcchhhhhhhhhhhHHHHHHHHhhCccEE-EecCCCceECCCccceeeEecCCCCceEechhhcchhHhhhh
Confidence 00011110 000000000011123344667777777 689999998765544441
Q ss_pred ---HHc-CCCcEEEEeCCCCCCCChHHHHHHHHHHH
Q 011425 248 ---NAY-AGDKNIIKFDGDHNSSRPQFYYDSVSIFF 279 (486)
Q Consensus 248 ---~~l-~~~~~l~~~~ggH~~~~p~~~~~~I~~FL 279 (486)
... .+...+..++|||....|+.+.+.|..||
T Consensus 243 gl~~l~~~~~~~~~~v~g~H~~~~~~~~~~~i~~~l 278 (279)
T 1ei9_A 243 GLKAMDKAGQLVFLALEGDHLQLSEEWFYAHIIPFL 278 (279)
T ss_dssp SHHHHHHTTCEEEEEESSSTTCCCHHHHHHHTGGGT
T ss_pred hHHHHHHCCCeEEEeccCchhccCHHHHHHHHHHhc
Confidence 111 23667888899998778888888887775
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=136.86 Aligned_cols=194 Identities=11% Similarity=0.030 Sum_probs=119.2
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
..++|+++||++++...|..++..|.. |.|+++|+||+|.. ++++.+.++.+. ..++++|+|||
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l~~--~~v~~~d~~g~~~~-----------~~~~~~~i~~~~---~~~~~~l~G~S 79 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRLPS--YKLCAFDFIEEEDR-----------LDRYADLIQKLQ---PEGPLTLFGYS 79 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCTT--EEEEEECCCCSTTH-----------HHHHHHHHHHHC---CSSCEEEEEET
T ss_pred CCCCEEEECCCCCchHHHHHHHHhcCC--CeEEEecCCCHHHH-----------HHHHHHHHHHhC---CCCCeEEEEEC
Confidence 458899999999999999999988865 99999999987731 456666665552 23689999999
Q ss_pred chHHHHHHHHhcCC----CccEEEEcCCccCHH--H--------HHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhccc
Q 011425 145 MGAVTSLLYGAEDP----SIAGMVLDSAFSDLF--D--------LMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFD 210 (486)
Q Consensus 145 mGG~lAl~~A~~~p----~v~~lVl~sp~~~~~--~--------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 210 (486)
|||.+++.+|...+ .+.++|++++..... . .+..+..... .............+.........+.
T Consensus 80 ~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T 1jmk_C 80 AGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNR-DNEALNSEAVKHGLKQKTHAFYSYY 158 (230)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTT-TCSGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcCh-hhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 99999999998753 389999987653210 0 0001110000 0000000111111110000000000
Q ss_pred ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCC--CCC--ChHHHHHHHHHHHH
Q 011425 211 IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDH--NSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 211 ~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH--~~~--~p~~~~~~I~~FL~ 280 (486)
. .......+++|+++++|++|..++ .....+.+......+++.++||| +.. .++.+.+.|.+||.
T Consensus 159 ~----~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~~~~~~~~~i~g~H~~~~~~~~~~~~~~~i~~~l~ 227 (230)
T 1jmk_C 159 V----NLISTGQVKADIDLLTSGADFDIP-EWLASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLN 227 (230)
T ss_dssp H----HCCCCSCBSSEEEEEECSSCCCCC-TTEECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHT
T ss_pred h----hccccccccccEEEEEeCCCCCCc-cccchHHHhcCCCeEEEEecCChHHHcCcHhHHHHHHHHHHHHh
Confidence 0 002346788999999999999987 22223333344567889999999 544 35566677777664
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.57 E-value=6.9e-15 Score=146.91 Aligned_cols=204 Identities=10% Similarity=-0.044 Sum_probs=126.2
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHH-HHHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL-KVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl-~~~i~~l~~~~~~~~i~LvG 142 (486)
+..|+||++||++++...|..++..|. .+|.|+++|+||+|.+.... .. ++++ ...++.+......++++|+|
T Consensus 99 g~~~~l~~lhg~~~~~~~~~~l~~~L~-~~~~v~~~d~~g~~~~~~~~--~~---~~~~a~~~~~~i~~~~~~~~~~l~G 172 (329)
T 3tej_A 99 GNGPTLFCFHPASGFAWQFSVLSRYLD-PQWSIIGIQSPRPNGPMQTA--AN---LDEVCEAHLATLLEQQPHGPYYLLG 172 (329)
T ss_dssp CSSCEEEEECCTTSCCGGGGGGGGTSC-TTCEEEEECCCTTTSHHHHC--SS---HHHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred CCCCcEEEEeCCcccchHHHHHHHhcC-CCCeEEEeeCCCCCCCCCCC--CC---HHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 456899999999999999998888884 47999999999998765221 11 2333 33355555554557999999
Q ss_pred EcchHHHHHHHHhc---CCC-ccEEEEcCCccCHHHHH-------------HHHH---H-HHhhhCCchhHHHHHHHHHH
Q 011425 143 RSMGAVTSLLYGAE---DPS-IAGMVLDSAFSDLFDLM-------------LELV---D-VYKIRLPKFTVKMAVQYMRR 201 (486)
Q Consensus 143 hSmGG~lAl~~A~~---~p~-v~~lVl~sp~~~~~~~~-------------~~~~---~-~~~~~~p~~~~~~~~~~~~~ 201 (486)
|||||.+++.+|.. .+. |.++|++++........ .... . ................+...
T Consensus 173 ~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (329)
T 3tej_A 173 YSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGN 252 (329)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHH
T ss_pred EccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 99999999999998 887 99999998776542210 0000 0 00000000000011111110
Q ss_pred HHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--Ch--HHHHHHHHH
Q 011425 202 VIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RP--QFYYDSVSI 277 (486)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p--~~~~~~I~~ 277 (486)
........ .......+.+|++++.|..|..++......+.... +..+++.++|||+.+ .+ +.+.+.|.+
T Consensus 253 ~~~~~~~~------~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~-~~~~~~~v~g~H~~~~~~~~~~~ia~~l~~ 325 (329)
T 3tej_A 253 YADAVRLL------TTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI-AELDIYRQDCAHVDIISPGTFEKIGPIIRA 325 (329)
T ss_dssp HHHHHHHH------TTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE-EEEEEEEESSCGGGGGSTTTHHHHHHHHHH
T ss_pred HHHHHHHH------hcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc-CCcEEEEecCChHHhCCChHHHHHHHHHHH
Confidence 00000000 00113467899999999999887665444444433 457888889999855 23 566666766
Q ss_pred HHH
Q 011425 278 FFY 280 (486)
Q Consensus 278 FL~ 280 (486)
||.
T Consensus 326 ~L~ 328 (329)
T 3tej_A 326 TLN 328 (329)
T ss_dssp HHC
T ss_pred Hhc
Confidence 663
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-13 Score=142.90 Aligned_cols=247 Identities=14% Similarity=0.160 Sum_probs=149.0
Q ss_pred EEEEEEEcCCCcE--EEEEEEecCCCCCCCCCcEEEEeCCCCCChhh--------------------H-HHHHHHh-ccC
Q 011425 37 RQDLEIRNARGHV--LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--------------------A-NEAAVIL-LPS 92 (486)
Q Consensus 37 ~~~i~~~~~dG~~--L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--------------------~-~~~~~~L-~~~ 92 (486)
+..+.-+..+|.. ..+.+++|.+. .++.|+|.|-||..+.... + ..++..+ +.+
T Consensus 77 ri~Y~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~ 154 (462)
T 3guu_A 77 QLQYRTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQ 154 (462)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHT
T ss_pred EEEEEEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhC
Confidence 3344444556654 77778899753 2358999999999764211 1 1345566 888
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC---CCcEEEEEEcchHHHHHHHHhcC----CC--ccEE
Q 011425 93 NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAED----PS--IAGM 163 (486)
Q Consensus 93 Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~---~~~i~LvGhSmGG~lAl~~A~~~----p~--v~~l 163 (486)
||.|+++|++|+|.+-.. +..+..++.+.++.++...+ ..+++++|||+||..++.+|... |+ +.++
T Consensus 155 G~~Vv~~Dy~G~G~~y~~----~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~ 230 (462)
T 3guu_A 155 GYYVVSSDHEGFKAAFIA----GYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGA 230 (462)
T ss_dssp TCEEEEECTTTTTTCTTC----HHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCEEEEecCCCCCCcccC----CcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEE
Confidence 999999999999963111 11112233333333333222 37999999999999999887754 34 8999
Q ss_pred EEcCCccCHHHHHHHHH------------HHHhhhCCchhH-------HHHHHHHHHHHhh------h----h---cccc
Q 011425 164 VLDSAFSDLFDLMLELV------------DVYKIRLPKFTV-------KMAVQYMRRVIQK------K----A---KFDI 211 (486)
Q Consensus 164 Vl~sp~~~~~~~~~~~~------------~~~~~~~p~~~~-------~~~~~~~~~~~~~------~----~---~~~~ 211 (486)
+..+++.++......+. ..+....|.+.. ......+...... . . ...+
T Consensus 231 ~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 310 (462)
T 3guu_A 231 SHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVFSL 310 (462)
T ss_dssp EEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGGGG
T ss_pred EEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHHHH
Confidence 99999988766543221 111111222110 0011111111100 0 0 0000
Q ss_pred cc-cch---------h--hh---------CCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCC
Q 011425 212 MD-LNC---------L--KL---------APKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS 266 (486)
Q Consensus 212 ~~-~~~---------~--~~---------l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~ 266 (486)
.. .+. . .. ...+++|+||+||..|.+||++.++++++.+. .+++++.+++ +|...
T Consensus 311 ~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~ 390 (462)
T 3guu_A 311 VNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTA 390 (462)
T ss_dssp BSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHH
T ss_pred cCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCc
Confidence 00 000 0 11 23567999999999999999999999998763 4678899997 99765
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCCc
Q 011425 267 RPQFYYDSVSIFFYNVLHPPQIPST 291 (486)
Q Consensus 267 ~p~~~~~~I~~FL~~~l~~~~~~~~ 291 (486)
.. .-...+.+||.+++... .+..
T Consensus 391 ~~-~~~~d~l~WL~~r~~G~-~~~~ 413 (462)
T 3guu_A 391 EI-FGLVPSLWFIKQAFDGT-TPKV 413 (462)
T ss_dssp HH-HTHHHHHHHHHHHHHTC-CCCC
T ss_pred hh-hhHHHHHHHHHHHhCCC-CCCC
Confidence 32 23678899999998765 4443
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.7e-14 Score=137.77 Aligned_cols=198 Identities=10% Similarity=-0.029 Sum_probs=122.2
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
+..++||++||++++...|..++..|.. +|.|+++|+||++. .++++.+.++.+ ....+++|+||
T Consensus 20 ~~~~~l~~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~~~-----------~~~~~~~~i~~~---~~~~~~~l~Gh 84 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFGIYFKDLALQLNH-KAAVYGFHFIEEDS-----------RIEQYVSRITEI---QPEGPYVLLGY 84 (244)
T ss_dssp CCSSEEEEECCTTCCGGGGHHHHHHTTT-TSEEEEECCCCSTT-----------HHHHHHHHHHHH---CSSSCEEEEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHhCC-CceEEEEcCCCHHH-----------HHHHHHHHHHHh---CCCCCEEEEEE
Confidence 3568999999999999999999988874 79999999998742 245555555444 23468999999
Q ss_pred cchHHHHHHHHhcC---CC-ccEEEEcCCccCHHHHH-HHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhh
Q 011425 144 SMGAVTSLLYGAED---PS-IAGMVLDSAFSDLFDLM-LELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLK 218 (486)
Q Consensus 144 SmGG~lAl~~A~~~---p~-v~~lVl~sp~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (486)
||||.+++.+|... +. +.++|++++........ ............. .....+...+.....+.. ...
T Consensus 85 S~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~ 156 (244)
T 2cb9_A 85 SAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAYLPE----AVRETVMQKKRCYQEYWA----QLI 156 (244)
T ss_dssp THHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CCSCH----HHHHHHTHHHHHHHHHHH----HCC
T ss_pred CHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHHhHH----HHHHHHHHHHHHHHHHHH----hhc
Confidence 99999999999875 33 89999988754310000 0000000000000 000000000000000000 002
Q ss_pred hCCCCCCCEEEEEeC--CCCCCCHHHHHHHHHHcCCCcEEEEeCCCC--CCC--ChHHHHHHHHHHHHHhcCC
Q 011425 219 LAPKTFIPALFGHAS--EDKFIRARHSDLIFNAYAGDKNIIKFDGDH--NSS--RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 219 ~l~~i~~PvLii~G~--~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH--~~~--~p~~~~~~I~~FL~~~l~~ 285 (486)
....+++|+++++|+ +|.+ ++.....+.+......+++.++||| +.. .++.+.+.|.+||.+....
T Consensus 157 ~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i~ggH~~~~~~~~~~~~~~~i~~~L~~~~~~ 228 (244)
T 2cb9_A 157 NEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTGYGAHKDMLEGEFAEKNANIILNILDKINSD 228 (244)
T ss_dssp CCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEECSSBGGGTTSHHHHHHHHHHHHHHHHTC---
T ss_pred cCCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEecCChHHHcChHHHHHHHHHHHHHHhcCccC
Confidence 346788999999999 8874 4444333444444568899999999 544 4778889999999876543
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-13 Score=136.40 Aligned_cols=205 Identities=12% Similarity=0.054 Sum_probs=129.1
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-------HHHHHHhccC----CeEEEEEcCCCCC
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-------NEAAVILLPS----NITLFTLDFSGSG 105 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-------~~~~~~L~~~----Gy~Vv~~D~rG~G 105 (486)
.+.+.+.+.+| .+.+++|+|.+...+++.|+||++||++++...| ..++..|+.. +|.|+++|++|.
T Consensus 41 ~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~- 118 (297)
T 1gkl_A 41 IVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG- 118 (297)
T ss_dssp EEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST-
T ss_pred EEEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC-
Confidence 35677877776 8999999998765456789999999998765433 3566677665 499999998752
Q ss_pred CCCCCCCCCCcchHHHHHHHHHHHHhcCC--------------CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc
Q 011425 106 LSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--------------TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (486)
Q Consensus 106 ~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~--------------~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~ 170 (486)
+.. ...+. ..-+.+++.++.+.+. ..+++|+|+||||++++.++..+|+ ++++++++|..
T Consensus 119 -~~~---~~~~~-~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 119 -NCT---AQNFY-QEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp -TCC---TTTHH-HHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred -ccc---hHHHH-HHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 211 11111 1123455566655432 2569999999999999999999998 99999999875
Q ss_pred CHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 171 DLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 171 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
.... ..... ...+...+. ...+....+++++.+|+.|.++ ...+++.+.+
T Consensus 194 ~~~~---------------~~~~~-~~~~~~~~~------------~~~~~~~~~~l~~~~G~~D~~~--~~~~~l~~~L 243 (297)
T 1gkl_A 194 WYGN---------------SPQDK-ANSIAEAIN------------RSGLSKREYFVFAATGSEDIAY--ANMNPQIEAM 243 (297)
T ss_dssp CBSS---------------SHHHH-HHHHHHHHH------------HHTCCTTSCEEEEEEETTCTTH--HHHHHHHHHH
T ss_pred ccCC---------------ccchh-hhHHHHHHh------------hccCCcCcEEEEEEeCCCcccc--hhHHHHHHHH
Confidence 3210 00000 000000000 0112233467777899999874 4566666665
Q ss_pred C--C-----------CcEEEEeCC-CCCCCChHHHHHHHHHHHHH
Q 011425 251 A--G-----------DKNIIKFDG-DHNSSRPQFYYDSVSIFFYN 281 (486)
Q Consensus 251 ~--~-----------~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~ 281 (486)
. + +.++.+++| ||... .+...+.++|..
T Consensus 244 ~~~g~~~~~~~~~~~~~~~~~~~g~gH~~~---~w~~~l~~~l~~ 285 (297)
T 1gkl_A 244 KALPHFDYTSDFSKGNFYFLVAPGATHWWG---YVRHYIYDALPY 285 (297)
T ss_dssp HTSTTCCBBSCTTTCCEEEEEETTCCSSHH---HHHHHHHHHGGG
T ss_pred HHcCCccccccccCCceEEEECCCCCcCHH---HHHHHHHHHHHH
Confidence 3 2 568888998 99632 233344444443
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.56 E-value=6e-14 Score=136.86 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=71.5
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHH-HHHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL-KVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl-~~~i~~l~~~~~~~~i~LvG 142 (486)
+..++||++||++++...|..++..|. +.|+++|+++.. .. ..++++ ..+++.+......++++|+|
T Consensus 22 ~~~~~l~~~hg~~~~~~~~~~~~~~L~---~~v~~~d~~~~~------~~---~~~~~~a~~~~~~i~~~~~~~~~~l~G 89 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTTVFHSLASRLS---IPTYGLQCTRAA------PL---DSIHSLAAYYIDCIRQVQPEGPYRVAG 89 (283)
T ss_dssp SSSCCEEEECCTTCCSGGGHHHHHHCS---SCEEEECCCTTS------CC---SCHHHHHHHHHHHHTTTCCSSCCEEEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHhcC---ceEEEEecCCCC------CC---CCHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 457889999999999999999998886 899999996421 11 123333 33444444433347899999
Q ss_pred EcchHHHHHHHHhcC---CC-cc---EEEEcCCccC
Q 011425 143 RSMGAVTSLLYGAED---PS-IA---GMVLDSAFSD 171 (486)
Q Consensus 143 hSmGG~lAl~~A~~~---p~-v~---~lVl~sp~~~ 171 (486)
|||||.+|+.+|... +. +. ++|++++...
T Consensus 90 hS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 90 YSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp ETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred ECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 999999999999865 44 77 9999887653
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.4e-13 Score=132.13 Aligned_cols=232 Identities=12% Similarity=0.003 Sum_probs=127.3
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCCC--CChhhHHHH---HHHhccCCeEEEEEcCCCC-CCCCCC
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS--GCRADANEA---AVILLPSNITLFTLDFSGS-GLSDGD 110 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g--g~~~~~~~~---~~~L~~~Gy~Vv~~D~rG~-G~S~~~ 110 (486)
+.+.+.+. .|..+.++ +|... .++||++||++ ++...|... ...+...||.|+++|.+|. +.+...
T Consensus 7 ~~~~~~s~~~~~~~~v~--~~p~~-----~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~ 79 (280)
T 1dqz_A 7 EYLQVPSASMGRDIKVQ--FQGGG-----PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWY 79 (280)
T ss_dssp EEEEEEETTTTEEEEEE--EECCS-----SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCS
T ss_pred EEEEEECcccCceeEEE--EcCCC-----CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCC
Confidence 34445433 56676655 44321 25999999995 366677653 3567778999999998754 222211
Q ss_pred -CCC-----CCcchHHH-HHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH-HHHH
Q 011425 111 -YVS-----LGWHEKDD-LKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL-MLEL 179 (486)
Q Consensus 111 -~~~-----~~~~~~~D-l~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~-~~~~ 179 (486)
... ........ +.+++.++.+.+.. ++++|+||||||++|+.+|.++|+ ++++|++++....... ....
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~ 159 (280)
T 1dqz_A 80 QPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTL 159 (280)
T ss_dssp SSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHHH
T ss_pred CCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchhhh
Confidence 100 01111111 24555555553343 589999999999999999999998 9999999988653221 0000
Q ss_pred HHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC---CCCEEEEEeCCCC--------------CCCHHH
Q 011425 180 VDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT---FIPALFGHASEDK--------------FIRARH 242 (486)
Q Consensus 180 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~PvLii~G~~D~--------------~vp~~~ 242 (486)
...+......+.. ..++...........++...+.++ ..|+++.+|+.|. .++...
T Consensus 160 ~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~ 232 (280)
T 1dqz_A 160 IGLAMNDSGGYNA-------NSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRT 232 (280)
T ss_dssp HHHHHHHTTSCCH-------HHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHH
T ss_pred HHHHhhhccCcCH-------HHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHH
Confidence 0000000000000 000000000000000111111111 4799999999997 467777
Q ss_pred HHHHHHHcC----CCcEEEEeC-CCCCCCChHHHHHHHHHHHHHhc
Q 011425 243 SDLIFNAYA----GDKNIIKFD-GDHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 243 ~~~l~~~l~----~~~~l~~~~-ggH~~~~p~~~~~~I~~FL~~~l 283 (486)
++.+++.+. ...++.+++ ++|............+.||.+.+
T Consensus 233 ~~~~~~~L~~~g~~~~~~~~~~~g~H~~~~w~~~l~~~l~~l~~~l 278 (280)
T 1dqz_A 233 NQTFRDTYAADGGRNGVFNFPPNGTHSWPYWNEQLVAMKADIQHVL 278 (280)
T ss_dssp HHHHHHHHHHTTCCSEEEECCSCCCSSHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEecCCCccChHHHHHHHHHHHHHHHHHh
Confidence 778777653 345666665 58975433344455556666544
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-13 Score=132.59 Aligned_cols=211 Identities=11% Similarity=0.075 Sum_probs=132.5
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC--hhhHHHHHHHh-ccCC---eEEEEEcCCCCC-----
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC--RADANEAAVIL-LPSN---ITLFTLDFSGSG----- 105 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~--~~~~~~~~~~L-~~~G---y~Vv~~D~rG~G----- 105 (486)
+.+.+.+. +|..+.+++|+|.+.....+.|+|+++||.+.. ...+..+...+ .+.| +.|+++|+++.+
T Consensus 19 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~ 98 (275)
T 2qm0_A 19 EQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGE 98 (275)
T ss_dssp EEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHH
T ss_pred eEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCccc
Confidence 45677766 789999999999876555678999999998631 12222333333 2346 999999998731
Q ss_pred -----CCCCC-----C--------CCCC-cch-HHHH-HHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-cc
Q 011425 106 -----LSDGD-----Y--------VSLG-WHE-KDDL-KVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IA 161 (486)
Q Consensus 106 -----~S~~~-----~--------~~~~-~~~-~~Dl-~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~ 161 (486)
.+... + ...+ ... .+.+ .+++.++.+.+.. .+++|+||||||.+++.++..+|+ ++
T Consensus 99 ~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~ 178 (275)
T 2qm0_A 99 ERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQ 178 (275)
T ss_dssp HHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCS
T ss_pred ccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhc
Confidence 01100 0 0001 001 1222 3455666665544 689999999999999999999998 99
Q ss_pred EEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHH
Q 011425 162 GMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (486)
Q Consensus 162 ~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 241 (486)
++++++|....... . ..... ..+... ........|+++++|+.|..++..
T Consensus 179 ~~~~~s~~~~~~~~-------~---~~~~~----~~~~~~----------------~~~~~~~~~~~l~~G~~D~~~~~~ 228 (275)
T 2qm0_A 179 NYFISSPSIWWNNK-------S---VLEKE----ENLIIE----------------LNNAKFETGVFLTVGSLEREHMVV 228 (275)
T ss_dssp EEEEESCCTTHHHH-------G---GGGGT----THHHHH----------------HHTCSSCEEEEEEEETTSCHHHHH
T ss_pred eeEEeCceeeeChH-------H---HHHHH----HHHHhh----------------hcccCCCceEEEEeCCcccchhhH
Confidence 99999988642110 0 00000 000000 002345679999999999988889
Q ss_pred HHHHHHHHc---CC---CcEEEEeCC-CCCCCChHHHHHHHHHHH
Q 011425 242 HSDLIFNAY---AG---DKNIIKFDG-DHNSSRPQFYYDSVSIFF 279 (486)
Q Consensus 242 ~~~~l~~~l---~~---~~~l~~~~g-gH~~~~p~~~~~~I~~FL 279 (486)
.++++++.+ .. ..++.++++ +|.......+. ..+.||
T Consensus 229 ~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~~~~~l~-~~l~~l 272 (275)
T 2qm0_A 229 GANELSERLLQVNHDKLKFKFYEAEGENHASVVPTSLS-KGLRFI 272 (275)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEEEETTCCTTTHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHhcccCCceEEEEECCCCCccccHHHHHH-HHHHHH
Confidence 999999888 32 356778888 66544343443 334554
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3e-13 Score=133.32 Aligned_cols=116 Identities=10% Similarity=0.023 Sum_probs=91.9
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCCCCh-hhHH-HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADAN-EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVV 126 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~-~~~~-~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i 126 (486)
.|...++.|...+ .+..++|||+||++++. ..|. .++..|.++||.|+++|+||||.++.. ...+++.+.+
T Consensus 49 ~L~~~i~~p~~~~-~~~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~------~~~~~la~~I 121 (316)
T 3icv_A 49 VLDAGLTCQGASP-SSVSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDTQ------VNTEYMVNAI 121 (316)
T ss_dssp HHHHTEEETTBBT-TBCSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCHH------HHHHHHHHHH
T ss_pred hHhhhEeCCCCCC-CCCCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcHH------HHHHHHHHHH
Confidence 4555566675432 34568899999999997 6787 889999999999999999999975411 2257788888
Q ss_pred HHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC---C-ccEEEEcCCccC
Q 011425 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP---S-IAGMVLDSAFSD 171 (486)
Q Consensus 127 ~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p---~-v~~lVl~sp~~~ 171 (486)
+++.+..+.++++|+||||||.++..++..+| + |+++|+++++..
T Consensus 122 ~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 122 TTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 88888777789999999999999987777653 3 999999998754
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.1e-13 Score=140.14 Aligned_cols=214 Identities=9% Similarity=0.022 Sum_probs=132.4
Q ss_pred EEEEEEc-CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCCh-hhHHHHHHHhccCCe----EEEEEcCCCCC-CCCCC
Q 011425 38 QDLEIRN-ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNI----TLFTLDFSGSG-LSDGD 110 (486)
Q Consensus 38 ~~i~~~~-~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~-~~~~~~~~~L~~~Gy----~Vv~~D~rG~G-~S~~~ 110 (486)
+.+.+.+ ..|..+.+++|+|.+.. ..+.|+||++||.+... ..+..++..|+..|+ .|+++|++|++ ++..
T Consensus 169 ~~~~~~S~~~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~- 246 (403)
T 3c8d_A 169 KEIIWKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHE- 246 (403)
T ss_dssp EEEEEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHH-
T ss_pred EEEEEEccccCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCcccccc-
Confidence 4555554 46788999999997542 46789999999953211 112345667777766 49999998732 1211
Q ss_pred CCCCCcchHHH-HHHHHHHHHhcCCC----CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHh
Q 011425 111 YVSLGWHEKDD-LKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYK 184 (486)
Q Consensus 111 ~~~~~~~~~~D-l~~~i~~l~~~~~~----~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~ 184 (486)
.. ......+. +.+++.++.+.+.. ++++|+||||||++++.++..+|+ ++++++++|....... .
T Consensus 247 ~~-~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~--------~ 317 (403)
T 3c8d_A 247 LP-CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHR--------G 317 (403)
T ss_dssp SS-SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCT--------T
T ss_pred CC-ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCC--------C
Confidence 10 01011122 24677777776432 589999999999999999999998 9999999987632110 0
Q ss_pred hhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC
Q 011425 185 IRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG 261 (486)
Q Consensus 185 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g 261 (486)
..+. ......+ .. ........|+++++|+.|..+ ...++.+++.+. ..+++.+++|
T Consensus 318 -~~~~---~~~~~~~----~~------------~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G 376 (403)
T 3c8d_A 318 -GQQE---GVLLEKL----KA------------GEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG 376 (403)
T ss_dssp -SSSC---CHHHHHH----HT------------TSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC
T ss_pred -CCcH---HHHHHHH----Hh------------ccccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 0000 0000000 00 012345679999999988654 567888888875 3678899999
Q ss_pred CCCCCChHHHHHHHHHHHHHhc
Q 011425 262 DHNSSRPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 262 gH~~~~p~~~~~~I~~FL~~~l 283 (486)
+|............+.||.+..
T Consensus 377 gH~~~~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 377 GHDALCWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHHHHhccc
Confidence 9985433344555666776554
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.43 E-value=5.4e-14 Score=145.77 Aligned_cols=108 Identities=12% Similarity=0.087 Sum_probs=85.7
Q ss_pred CCCcEEEEeCCCCCCh-hhHHH-HHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCCc-chHHHHHHHHHHHHhcCC--CCc
Q 011425 64 TPLPCVVYCHGNSGCR-ADANE-AAVILLP-SNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYLRGNKQ--TSR 137 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~-~~~~~-~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~~-~~~~Dl~~~i~~l~~~~~--~~~ 137 (486)
...|+||++||++++. ..|.. ++..|.+ .||+|+++|+||+|.|......... ...+|+.++++++.+..+ .++
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~ 147 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPEN 147 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 4579999999999988 57877 7777876 6999999999999988621111111 115788889999875433 589
Q ss_pred EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
++|+||||||.+|+.+|..+|+ |+++++++|...
T Consensus 148 i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 148 VHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp EEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred EEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 9999999999999999999987 999999887654
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.35 E-value=3.5e-12 Score=126.86 Aligned_cols=104 Identities=19% Similarity=0.199 Sum_probs=84.5
Q ss_pred CCCcEEEEeCCCCCCh------hhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCc
Q 011425 64 TPLPCVVYCHGNSGCR------ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSR 137 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~------~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 137 (486)
.++|+|||+||++++. ..|..+++.|.++||.|+++|+||+|.+.... ...+++.+.++.+.+..+.++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~-----~~~~~l~~~i~~~l~~~~~~~ 80 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN-----GRGEQLLAYVKTVLAATGATK 80 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTT-----SHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhCCCC
Confidence 4578999999999887 77888999999999999999999999986432 223445555544444446689
Q ss_pred EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~ 172 (486)
++|+||||||.+++.++..+|+ |+++|+++++...
T Consensus 81 v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~G 116 (320)
T 1ys1_X 81 VNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRG 116 (320)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTC
T ss_pred EEEEEECHhHHHHHHHHHhChhhceEEEEECCCCCC
Confidence 9999999999999999999887 9999999987543
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5e-13 Score=139.10 Aligned_cols=109 Identities=11% Similarity=0.037 Sum_probs=85.3
Q ss_pred CCCCcEEEEeCCCCCCh-hhHHH-HHHHhccC-CeEEEEEcCCCCCCCCCCCCCCCc-chHHHHHHHHHHHHhcCC--CC
Q 011425 63 DTPLPCVVYCHGNSGCR-ADANE-AAVILLPS-NITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYLRGNKQ--TS 136 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~-~~~~~-~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~-~~~~Dl~~~i~~l~~~~~--~~ 136 (486)
++..|+||++||++++. ..|.. ++..|.+. ||+|+++|++|+|.|......... ...+|+.++++++.+..+ .+
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~ 146 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (452)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 35679999999999988 67877 66777654 999999999999998621111111 125778888888865433 48
Q ss_pred cEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 137 RIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 137 ~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
+++|+||||||.+|+.+|..+|+ |.++|+++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 147 NVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 99999999999999999999998 999999987653
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.4e-13 Score=139.52 Aligned_cols=108 Identities=11% Similarity=0.051 Sum_probs=84.9
Q ss_pred CCCcEEEEeCCCCCCh-hhHHH-HHHHhccC-CeEEEEEcCCCCCCCCCCCCCCCc-chHHHHHHHHHHHHhcCC--CCc
Q 011425 64 TPLPCVVYCHGNSGCR-ADANE-AAVILLPS-NITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYLRGNKQ--TSR 137 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~-~~~~~-~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~~~~-~~~~Dl~~~i~~l~~~~~--~~~ 137 (486)
+..|+||++||++++. ..|.. ++..|+++ ||+|+++|++|+|.|......... ...+|+.++++++.+..+ .++
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~~ 147 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPEN 147 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 5579999999999988 67877 66777665 999999999999998621110111 115678888888865433 589
Q ss_pred EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
++|+||||||.+|+.+|..+|+ |.++|+++|...
T Consensus 148 i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 148 VHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 9999999999999999999997 999999988653
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.32 E-value=7.9e-13 Score=132.43 Aligned_cols=108 Identities=13% Similarity=0.105 Sum_probs=86.9
Q ss_pred CCCcEEEEeCCCCCC----------hhhH----HHHHHHhccCCeE---EEEEcCCCCCCCCCCCCCC-CcchHHHHHHH
Q 011425 64 TPLPCVVYCHGNSGC----------RADA----NEAAVILLPSNIT---LFTLDFSGSGLSDGDYVSL-GWHEKDDLKVV 125 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~----------~~~~----~~~~~~L~~~Gy~---Vv~~D~rG~G~S~~~~~~~-~~~~~~Dl~~~ 125 (486)
...++|||+||++++ ...| ..++..|.++||. |+++|++|+|.|....... ....++++.+.
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~ 117 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTF 117 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHH
T ss_pred CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHH
Confidence 455679999999994 4567 7888999999998 9999999999876432111 11236788888
Q ss_pred HHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC--CC-ccEEEEcCCccC
Q 011425 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED--PS-IAGMVLDSAFSD 171 (486)
Q Consensus 126 i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~--p~-v~~lVl~sp~~~ 171 (486)
++.+.+..+.++++|+||||||.+++.++.++ |+ |+++|+++++..
T Consensus 118 I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 118 IDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 88887776778999999999999999999987 65 999999998753
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.9e-12 Score=126.70 Aligned_cols=100 Identities=19% Similarity=0.131 Sum_probs=81.1
Q ss_pred CCCcEEEEeCCCCCChh-----hHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcE
Q 011425 64 TPLPCVVYCHGNSGCRA-----DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRI 138 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~-----~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i 138 (486)
+.+|+|||+||++++.. .|..+...|.++||.|+++|+||+|.+. ...+++.+.++.+.+..+.+++
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~--------~~~~~~~~~i~~~~~~~~~~~v 76 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE--------VRGEQLLQQVEEIVALSGQPKV 76 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH--------HHHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch--------hhHHHHHHHHHHHHHHhCCCCE
Confidence 45789999999998754 7888999999999999999999999875 1234444444444444456899
Q ss_pred EEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 139 GLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
+|+||||||.+++.++..+|+ |+++|+++++..
T Consensus 77 ~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 77 NLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEEEECHhHHHHHHHHHhChhheeEEEEECCCCC
Confidence 999999999999999999987 999999998654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.30 E-value=2.3e-11 Score=104.16 Aligned_cols=97 Identities=18% Similarity=0.122 Sum_probs=69.9
Q ss_pred EcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHH
Q 011425 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL 122 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl 122 (486)
...+|.++.+..+ ++.|+|||+| ++...|..+ |.+ +|.|+++|+||||.|...... .+++
T Consensus 7 ~~~~g~~~~~~~~--------g~~~~vv~~H---~~~~~~~~~---l~~-~~~v~~~d~~G~G~s~~~~~~-----~~~~ 66 (131)
T 2dst_A 7 LHLYGLNLVFDRV--------GKGPPVLLVA---EEASRWPEA---LPE-GYAFYLLDLPGYGRTEGPRMA-----PEEL 66 (131)
T ss_dssp EEETTEEEEEEEE--------CCSSEEEEES---SSGGGCCSC---CCT-TSEEEEECCTTSTTCCCCCCC-----HHHH
T ss_pred EEECCEEEEEEEc--------CCCCeEEEEc---CCHHHHHHH---HhC-CcEEEEECCCCCCCCCCCCCC-----HHHH
Confidence 3457888876654 2357899999 444555544 554 599999999999999865443 2333
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS 159 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~ 159 (486)
.+.+..+.+..+.++++++||||||.+++.+|..+|.
T Consensus 67 ~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 67 AHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 3333333333366799999999999999999999985
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.2e-11 Score=118.55 Aligned_cols=210 Identities=10% Similarity=0.033 Sum_probs=120.7
Q ss_pred EEEEEEEcCC-CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhcc-CCeEEEEEcCCCCC---------
Q 011425 37 RQDLEIRNAR-GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP-SNITLFTLDFSGSG--------- 105 (486)
Q Consensus 37 ~~~i~~~~~d-G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G--------- 105 (486)
.+.+.+.+.. |..+.+++|+|.+.....+.|+|+++||..........+...|+. .+..||++++++..
T Consensus 13 ~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~~ 92 (278)
T 2gzs_A 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAY 92 (278)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHH
T ss_pred eEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHHHHHHHHHHHhccCCCeEEEEEcCCCCCcCccccccc
Confidence 3556777665 789999999998765556678888888764311111223445554 56778888886521
Q ss_pred -CCCCC-C-----CC----CCcchHHHHH-----HHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEc
Q 011425 106 -LSDGD-Y-----VS----LGWHEKDDLK-----VVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLD 166 (486)
Q Consensus 106 -~S~~~-~-----~~----~~~~~~~Dl~-----~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~ 166 (486)
.+... . .. .......++. +++.++.+.+.. .+++|+||||||++++.++.. |+ +++++++
T Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~ 171 (278)
T 2gzs_A 93 DYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSA 171 (278)
T ss_dssp HTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEE
T ss_pred ccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEe
Confidence 11100 0 00 0000122222 334455555444 469999999999999999999 98 9999999
Q ss_pred CCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCC-------
Q 011425 167 SAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIR------- 239 (486)
Q Consensus 167 sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp------- 239 (486)
+|...... ........ .+. .. ..-..|+++.+|+.|..++
T Consensus 172 s~~~~~~~------------------~~~~~~~~-------~~~-------~~-~~~~~~i~l~~G~~d~~~~~~~~~~~ 218 (278)
T 2gzs_A 172 SPSLGRGY------------------DALLSRVT-------AVE-------PL-QFCTKHLAIMEGSATQGDNRETHAVG 218 (278)
T ss_dssp SGGGSTTH------------------HHHHHHHH-------TSC-------TT-TTTTCEEEEEECCC-----------C
T ss_pred CcchhcCc------------------chHHHHHH-------Hhh-------cc-CCCCCcEEEEecCccccccccchhhh
Confidence 88643211 00000000 000 00 0123589999999998643
Q ss_pred -HHHHHHHHHHcC---CCcEEEEeCC-CCCCCChHHHHHHHHHHHHH
Q 011425 240 -ARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFFYN 281 (486)
Q Consensus 240 -~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~ 281 (486)
...++++++.+. ...++.+++| +|.......+.+. +.||.+
T Consensus 219 ~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~~~~~~~~-l~fl~~ 264 (278)
T 2gzs_A 219 VLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFNASFRQA-LLDISG 264 (278)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHHHHHHHH-HHHHTT
T ss_pred hHHHHHHHHHHHHcCCCeeEEEEcCCCCccchhHHHHHHH-HHHHhh
Confidence 667777777653 4678888998 5764434444433 346654
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-12 Score=135.01 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=87.3
Q ss_pred CCCCcEEEEeCCCCCChhhHHHHHHHhccCCe---EEEEEcCCCCCCC-----CCCCC----------------------
Q 011425 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNI---TLFTLDFSGSGLS-----DGDYV---------------------- 112 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy---~Vv~~D~rG~G~S-----~~~~~---------------------- 112 (486)
....++|||+||++++...|..++..|.++|| .|+++|++|+|.| +....
T Consensus 19 ~~~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v 98 (484)
T 2zyr_A 19 AEDFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKI 98 (484)
T ss_dssp --CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccc
Confidence 34578999999999999999999999999999 7999999999976 10000
Q ss_pred --C---CCc-chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC----CccEEEEcCCccC
Q 011425 113 --S---LGW-HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFSD 171 (486)
Q Consensus 113 --~---~~~-~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p----~v~~lVl~sp~~~ 171 (486)
. ... ..++++.+.++.+.+..+..+++|+||||||.+++.++..+| .|+++|+++++..
T Consensus 99 ~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 99 LSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0 001 125677777777777767789999999999999999999996 5999999998865
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=5.9e-11 Score=122.80 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=77.3
Q ss_pred CcEEEEeCCCCCChhhHH---HHHHHhcc-CCeEEEEEcCCCCCCCCCCC-------CCCCc----chHHHHHHHHHHHH
Q 011425 66 LPCVVYCHGNSGCRADAN---EAAVILLP-SNITLFTLDFSGSGLSDGDY-------VSLGW----HEKDDLKVVVSYLR 130 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~---~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~-------~~~~~----~~~~Dl~~~i~~l~ 130 (486)
..+|||+||+.++...+. .+...|++ .|+.|+++|+||||.|.... ....+ +.++|+..++++++
T Consensus 38 g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~ 117 (446)
T 3n2z_B 38 GGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLK 117 (446)
T ss_dssp TCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHH
Confidence 345777788888765432 12333443 37899999999999996321 11111 23789999999998
Q ss_pred hcC---CCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCcc
Q 011425 131 GNK---QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (486)
Q Consensus 131 ~~~---~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~ 170 (486)
... ...+++++||||||.+|+.++.++|+ |.++|+.+++.
T Consensus 118 ~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 118 RTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp HHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 753 33689999999999999999999999 99999987654
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.23 E-value=6.1e-12 Score=130.51 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=81.1
Q ss_pred CCCcEEEEeCCCCCChh-hHHH-HHHHhcc-CCeEEEEEcCCCCCCCCCCCCCCCc-chHHHHHHHHHHHHhcC--CCCc
Q 011425 64 TPLPCVVYCHGNSGCRA-DANE-AAVILLP-SNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYLRGNK--QTSR 137 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~-~~~~-~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~~~~~~-~~~~Dl~~~i~~l~~~~--~~~~ 137 (486)
...|+||++||++++.. .|.. ++..|+. .+|+|+++|++|+|.+......... ...+++.++++++.+.. +.++
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~ 147 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQ 147 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 45799999999998865 6766 5566655 4899999999999876411000011 11567778888885432 4589
Q ss_pred EEEEEEcchHHHHHHHHhcCCCccEEEEcCCccC
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD 171 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~ 171 (486)
++|+||||||.+|+.+|..+|+|.+++++.|...
T Consensus 148 v~LVGhSlGg~vA~~~a~~~p~v~~iv~Ldpa~p 181 (450)
T 1rp1_A 148 VQLIGHSLGAHVAGEAGSRTPGLGRITGLDPVEA 181 (450)
T ss_dssp EEEEEETHHHHHHHHHHHTSTTCCEEEEESCCCT
T ss_pred EEEEEECHhHHHHHHHHHhcCCcccccccCcccc
Confidence 9999999999999999999888999998887653
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.22 E-value=6.7e-12 Score=130.17 Aligned_cols=108 Identities=11% Similarity=0.072 Sum_probs=81.4
Q ss_pred CCCcEEEEeCCCCCCh-hhHHH-HHHHhc-cCCeEEEEEcCCCCCCCCCCCCCCCcc-hHHHHHHHHHHHHhcC--CCCc
Q 011425 64 TPLPCVVYCHGNSGCR-ADANE-AAVILL-PSNITLFTLDFSGSGLSDGDYVSLGWH-EKDDLKVVVSYLRGNK--QTSR 137 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~-~~~~~-~~~~L~-~~Gy~Vv~~D~rG~G~S~~~~~~~~~~-~~~Dl~~~i~~l~~~~--~~~~ 137 (486)
...|+||++||++++. ..|.. ++..|. ..+|+|+++|++|+|.+.......... ..+++.++++++.+.. +.++
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~ 146 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSN 146 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 4579999999999885 46766 556653 458999999999999875211000011 1456778888885432 3589
Q ss_pred EEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 138 i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
++|+||||||.+|+.+|..+|+ |.++|++.|...
T Consensus 147 v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 147 VHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 9999999999999999999997 999999887653
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.4e-10 Score=114.10 Aligned_cols=212 Identities=10% Similarity=0.051 Sum_probs=127.1
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCC-CCCCcEEEEeCCCCCChhhHHHHHHHhcc------CCeEEEEEcCCCCC--CC
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPE-DTPLPCVVYCHGNSGCRADANEAAVILLP------SNITLFTLDFSGSG--LS 107 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~-~~~~p~VV~lHG~gg~~~~~~~~~~~L~~------~Gy~Vv~~D~rG~G--~S 107 (486)
+.+.+.+. -|....+++|+|.+... ..+.|+|+++||..... ....+...+.. .++.||+++..+.+ .+
T Consensus 13 ~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~f~-~~~~~~~~l~~~~~~~~~~~IvV~i~~~~R~~dyt 91 (331)
T 3gff_A 13 QSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQFD-HMASLLQFLSQGTMPQIPKVIIVGIHNTNRMRDYT 91 (331)
T ss_dssp EEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHHHH-HHHHHHHHHTCSSSCSSCCCEEEEECCSSHHHHSC
T ss_pred EEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhhhH-HHHHHHHHHHhhhhcCCCCEEEEEECCCCcccccC
Confidence 44555544 58889999999987644 56789999999953111 11223444543 25788888762110 00
Q ss_pred C--------CCC----C--CCCcch-HHH-HHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCc
Q 011425 108 D--------GDY----V--SLGWHE-KDD-LKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (486)
Q Consensus 108 ~--------~~~----~--~~~~~~-~~D-l~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~ 169 (486)
+ +.. . ..+... .+. ..+++.++.+.+.. ...+|+||||||++++.++..+|+ +.+++.++|.
T Consensus 92 p~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~ 171 (331)
T 3gff_A 92 PTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTS 171 (331)
T ss_dssp SSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCC
T ss_pred CCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCch
Confidence 0 000 0 001111 111 23556677776554 345799999999999999999999 9999999987
Q ss_pred cCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCC-------CCCHHH
Q 011425 170 SDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDK-------FIRARH 242 (486)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~-------~vp~~~ 242 (486)
..... . .+.......+ ........|+++.+|+.|. .++...
T Consensus 172 ~w~~~--------------~----~~~~~~~~~~--------------~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~ 219 (331)
T 3gff_A 172 LWFDS--------------P----HYLTLLEERV--------------VKGDFKQKQLFMAIANNPLSPGFGVSSYHKDL 219 (331)
T ss_dssp TTTTT--------------T----HHHHHHHHHH--------------HHCCCSSEEEEEEECCCSEETTTEECCHHHHH
T ss_pred hcCCh--------------H----HHHHHHHHHh--------------hcccCCCCeEEEEeCCCCCCCccchHHHHHHH
Confidence 53110 0 0011111100 1111245799999999998 466667
Q ss_pred HHHHHHHcCC------CcEEEEeCC-CCCCCChHHHHHHHHHHHHHh
Q 011425 243 SDLIFNAYAG------DKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 243 ~~~l~~~l~~------~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~ 282 (486)
+.++.+.+.. ...+.++++ +|....+..+.+.+..+|..+
T Consensus 220 ~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~~~~~~~~l~~lf~~~ 266 (331)
T 3gff_A 220 NLAFADKLTKLAPKGLGFMAKYYPEETHQSVSHIGLYDGIRHLFKDF 266 (331)
T ss_dssp HHHHHHHHHHHCCTTEEEEEEECTTCCTTTHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhccCCCceEEEEECCCCCccccHHHHHHHHHHHHHhhc
Confidence 7777766542 456788888 788766656555555444444
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.1e-09 Score=105.66 Aligned_cols=228 Identities=15% Similarity=0.133 Sum_probs=132.1
Q ss_pred EEEEEc-CCCcEEEEEEEecCCCC-----CCCCCcEEEEeCCCCCChhhHHHH---HHHhccCCeEEEEEcCCCCCCC--
Q 011425 39 DLEIRN-ARGHVLQCSHYMPSPFP-----EDTPLPCVVYCHGNSGCRADANEA---AVILLPSNITLFTLDFSGSGLS-- 107 (486)
Q Consensus 39 ~i~~~~-~dG~~L~~~~~~P~~~~-----~~~~~p~VV~lHG~gg~~~~~~~~---~~~L~~~Gy~Vv~~D~rG~G~S-- 107 (486)
.+++.+ .-|....+.+|+|++.. .+++.|+|.++||++++...|... .+.+.+.+..++++|..-.+..
T Consensus 16 ~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~ 95 (299)
T 4fol_A 16 KLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVA 95 (299)
T ss_dssp EEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSC
T ss_pred EEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecC
Confidence 445544 46889999999997642 245689999999999998888653 3445556889999886422111
Q ss_pred ------------CCCCCCC-------Ccc-hHHHHHHHHHHHHhcCC---------CCcEEEEEEcchHHHHHHHHhcCC
Q 011425 108 ------------DGDYVSL-------GWH-EKDDLKVVVSYLRGNKQ---------TSRIGLWGRSMGAVTSLLYGAEDP 158 (486)
Q Consensus 108 ------------~~~~~~~-------~~~-~~~Dl~~~i~~l~~~~~---------~~~i~LvGhSmGG~lAl~~A~~~p 158 (486)
.+.+... .+. +..-+.+++.++.+.+. .++..|.||||||+-|+.+|.++|
T Consensus 96 ~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~ 175 (299)
T 4fol_A 96 NDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGY 175 (299)
T ss_dssp CCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTG
T ss_pred CCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCC
Confidence 0111110 000 01113344455544332 256899999999999999999865
Q ss_pred C---ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch---hhhCCCC-CCCEEEEE
Q 011425 159 S---IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC---LKLAPKT-FIPALFGH 231 (486)
Q Consensus 159 ~---v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~i-~~PvLii~ 231 (486)
. ..++...+|............. ...++.... ......+. +...... ..++++-+
T Consensus 176 ~~~~~~~~~s~s~~~~p~~~~~~~~~-------------~~~~~g~~~-----~~~~~~d~~~l~~~~~~~~~~~i~id~ 237 (299)
T 4fol_A 176 SGKRYKSCSAFAPIVNPSNVPWGQKA-------------FKGYLGEEK-----AQWEAYDPCLLIKNIRHVGDDRILIHV 237 (299)
T ss_dssp GGTCCSEEEEESCCCCGGGSHHHHHH-------------HHHHTC----------CGGGCHHHHGGGSCCCTTCCEEEEE
T ss_pred CCCceEEEEecccccCcccccccccc-------------cccccccch-----hhhhhcCHHHHHHhcccCCCCceEEEe
Confidence 3 7777777777654221111100 000000000 00111121 2222232 35789999
Q ss_pred eCCCCCCCHH-HHHHHHHHcC-----CCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 232 ASEDKFIRAR-HSDLIFNAYA-----GDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 232 G~~D~~vp~~-~~~~l~~~l~-----~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
|++|.+.... ..+.+.+++. ...++...+| +|.......+++..+.|..++|.
T Consensus 238 G~~D~f~~~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 238 GDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLG 297 (299)
T ss_dssp ETTCTTHHHHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCcchhhhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999886432 1244555443 2357778888 89866667777888888888764
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.18 E-value=4e-10 Score=112.24 Aligned_cols=232 Identities=13% Similarity=0.128 Sum_probs=133.4
Q ss_pred EEEEEEcCC-CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcC--------C---CCC
Q 011425 38 QDLEIRNAR-GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDF--------S---GSG 105 (486)
Q Consensus 38 ~~i~~~~~d-G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~--------r---G~G 105 (486)
.+|.+.... ...+...+|+|.+ ..++.|+||-+||..- ...+||.|+.++. + |+|
T Consensus 79 ~~i~~~~~~~s~~~~~~i~lP~~--~~~p~Pvii~i~~~~~-----------~~~~G~a~~~~~~~~v~~~~~~gs~g~g 145 (375)
T 3pic_A 79 LTINCGEAGKSISFTVTITYPSS--GTAPYPAIIGYGGGSL-----------PAPAGVAMINFNNDNIAAQVNTGSRGQG 145 (375)
T ss_dssp EEEEEEETTEEEEEEEEEECCSS--SCSSEEEEEEETTCSS-----------CCCTTCEEEEECHHHHSCCSSGGGTTCS
T ss_pred EEEEEecCCceeEEEEEEECCCC--CCCCccEEEEECCCcc-----------ccCCCeEEEEecccccccccCCCCccce
Confidence 456665432 3568889999974 2467789999998422 2567999999986 1 222
Q ss_pred CCC---CCCCCCCcch--HHHHHHHHHHHHhcC--CC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHH
Q 011425 106 LSD---GDYVSLGWHE--KDDLKVVVSYLRGNK--QT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLM 176 (486)
Q Consensus 106 ~S~---~~~~~~~~~~--~~Dl~~~i~~l~~~~--~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~ 176 (486)
.-. +.....+... +-++..+|+||+.+. .+ ++|+++|||+||..++.+|+.+++|+++|..++.......+
T Consensus 146 ~f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~Ri~~~v~~~~g~~G~~~~ 225 (375)
T 3pic_A 146 KFYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEKRIVLTLPQESGAGGSACW 225 (375)
T ss_dssp HHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCTTEEEEEEESCCTTTTSCH
T ss_pred ecccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCCceEEEEeccCCCCchhhh
Confidence 100 0001111111 357889999999886 55 79999999999999999999999999999987654322211
Q ss_pred HHH--HHHHhhhCCchhHHHHH---HHHHHHHhhh-hcccccccchhhhCCCC-CCCEEEEEeCCCCCCCHHHH------
Q 011425 177 LEL--VDVYKIRLPKFTVKMAV---QYMRRVIQKK-AKFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHS------ 243 (486)
Q Consensus 177 ~~~--~~~~~~~~p~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~------ 243 (486)
+.. ...+...... ..... .++...+... .......+|....+..+ ..|+|++.| .|..+++...
T Consensus 226 R~~~~~~~~Ge~v~~--~~~~~~e~~Wf~~~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g~~~~~~~ 302 (375)
T 3pic_A 226 RISDYLKSQGANIQT--ASEIIGEDPWFSTTFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQSCFGCMTA 302 (375)
T ss_dssp HHHHHHHHTTCCCCC--HHHHTTTCSCSCGGGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHHHHHHHHH
T ss_pred hhhhhhcccCccccc--cccccCcccccccchhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccCcHHHHHHHHH
Confidence 100 0111100000 00000 0000000000 00001111222222222 359999999 9998887643
Q ss_pred -HHHHHHcCC--CcEEEEeCCCCCCC-ChHHHHHHHHHHHHHhcCCC
Q 011425 244 -DLIFNAYAG--DKNIIKFDGDHNSS-RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 244 -~~l~~~l~~--~~~l~~~~ggH~~~-~p~~~~~~I~~FL~~~l~~~ 286 (486)
+.+++.++. +..+. +.+||... .+++..+.+.+||+++|...
T Consensus 303 a~~VY~~lG~~d~~~~~-~~ggH~Hc~fp~~~~~~~~~F~~k~L~~~ 348 (375)
T 3pic_A 303 AHMAWQALGVSDHMGYS-QIGAHAHCAFPSNQQSQLTAFVQKFLLGQ 348 (375)
T ss_dssp HHHHHHHTTCGGGEEEE-CCSCCSTTCCCGGGHHHHHHHHHHHTSCC
T ss_pred HHHHHHHcCCccceEEE-eeCCCccccCCHHHHHHHHHHHHHHhCCC
Confidence 344555553 33443 45666542 46677799999999999875
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=9.4e-10 Score=108.70 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=67.8
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH-HHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK-VVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~-~~i~~l~~~~~~~~i~LvG 142 (486)
+..+.|+++||++++...|..++..|. +.|+++|+++ . ... ..++++. .+++.+.......+++++|
T Consensus 44 ~~~~~l~~~hg~~g~~~~~~~~~~~l~---~~v~~~~~~~--~----~~~---~~~~~~a~~~~~~i~~~~~~~~~~l~G 111 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTTVFHSLASRLS---IPTYGLQCTR--A----APL---DSIHSLAAYYIDCIRQVQPEGPYRVAG 111 (316)
T ss_dssp CSSCCEEEECCTTCCSGGGHHHHHHCS---SCEEEECCCT--T----SCT---TCHHHHHHHHHHHHTTTCSSCCCEEEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHhcC---CCEEEEECCC--C----CCc---CCHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 456889999999999999999888874 8999999983 1 111 1233333 3344444332247899999
Q ss_pred EcchHHHHHHHHhcCC----C---ccEEEEcCCc
Q 011425 143 RSMGAVTSLLYGAEDP----S---IAGMVLDSAF 169 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p----~---v~~lVl~sp~ 169 (486)
|||||.+|+.+|.+.+ . +.++|++++.
T Consensus 112 ~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 112 YSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp ETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred ECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 9999999999987642 3 7899987764
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=4.2e-10 Score=113.32 Aligned_cols=231 Identities=16% Similarity=0.131 Sum_probs=130.9
Q ss_pred EEEEEEcCCC--cEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcC-----------CCC
Q 011425 38 QDLEIRNARG--HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDF-----------SGS 104 (486)
Q Consensus 38 ~~i~~~~~dG--~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~-----------rG~ 104 (486)
.+|.+.. .| ..+.+.+|+|.+ .++.|+||.+||... ....||.++.++. +|+
T Consensus 112 v~I~v~~-~g~s~sf~~~i~lP~g---~~P~Pvii~~~~~~~-----------~~~~G~A~i~f~~~~va~d~~~gsrG~ 176 (433)
T 4g4g_A 112 ITVRVTV-GSKSISFSASIRKPSG---AGPFPAIIGIGGASI-----------PIPSNVATITFNNDEFGAQMGSGSRGQ 176 (433)
T ss_dssp EEEEEEE-TTEEEEEEEEEECCSS---SCCEEEEEEESCCCS-----------CCCTTSEEEEECHHHHSCCSSGGGTTC
T ss_pred EEEEEEc-CCeeEEEEEEEECCCC---CCCccEEEEECCCcc-----------ccCCCeEEEEeCCcccccccCCCcCCc
Confidence 4565653 33 346889999974 467899999997431 2567999999987 222
Q ss_pred CCCC---CCCCCCCcch--HHHHHHHHHHHHh----cCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHH
Q 011425 105 GLSD---GDYVSLGWHE--KDDLKVVVSYLRG----NKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLF 173 (486)
Q Consensus 105 G~S~---~~~~~~~~~~--~~Dl~~~i~~l~~----~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~ 173 (486)
|.-- +.....+... +-++..+|+||+. +..+ ++|+++|||+||..++.+++.+++|+++|..++.....
T Consensus 177 g~f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~Ri~~vi~~~sg~~G~ 256 (433)
T 4g4g_A 177 GKFYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVDRIALTIPQESGAGGA 256 (433)
T ss_dssp SHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCTTTT
T ss_pred cccccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCCceEEEEEecCCCCch
Confidence 2100 0001111111 3478889999988 5555 79999999999999999999999999999988755422
Q ss_pred HHHHHH--HHHHhhhCCchhHHHHH---HHHHHHHhhh-hcccccccchhhhCCC-CCCCEEEEEeCCCCCCCHHHHH--
Q 011425 174 DLMLEL--VDVYKIRLPKFTVKMAV---QYMRRVIQKK-AKFDIMDLNCLKLAPK-TFIPALFGHASEDKFIRARHSD-- 244 (486)
Q Consensus 174 ~~~~~~--~~~~~~~~p~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~vp~~~~~-- 244 (486)
..++.. ...++...... .... .++...+... .......+|....+.. ...|+|++.| .|..+++....
T Consensus 257 ~~~R~~~~~~~~Ge~v~~~--~~~~ge~~Wf~~~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~g~~~a 333 (433)
T 4g4g_A 257 ACWRISDQQKAAGANIQTA--AQIITENPWFSRNFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPVSTTGC 333 (433)
T ss_dssp SCHHHHHHHHHTTCCCCCH--HHHTTTCCCSCTTTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHHHHHHH
T ss_pred hhhhhchhhcccCcchhhh--hcccCCccccchhhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCCcHHHHHH
Confidence 221110 00111000000 0000 0000000000 0000011111111111 1359999999 89888876443
Q ss_pred -----HHHHHcCC--CcEEEEeCCCCCCC-ChHHHHHHHHHHHHHhcCCCC
Q 011425 245 -----LIFNAYAG--DKNIIKFDGDHNSS-RPQFYYDSVSIFFYNVLHPPQ 287 (486)
Q Consensus 245 -----~l~~~l~~--~~~l~~~~ggH~~~-~p~~~~~~I~~FL~~~l~~~~ 287 (486)
.+++.++. ...+.+ .+||... .|.+..+.+.+||+++|....
T Consensus 334 ~~aa~~VY~~lGa~d~l~~~~-~ggH~Hc~fp~~~r~~~~~F~~k~Lkg~~ 383 (433)
T 4g4g_A 334 MAAGRLIYKAYGVPNNMGFSL-VGGHNHCQFPSSQNQDLNSYINYFLLGQG 383 (433)
T ss_dssp HHHHHHHHHHHTCGGGEEEEE-CCSSCTTCCCGGGHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHcCCccceEEEe-eCCCCcccCCHHHHHHHHHHHHHHhCCCC
Confidence 34555552 334443 5555432 356677899999999998753
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=98.98 E-value=4.7e-10 Score=113.86 Aligned_cols=100 Identities=15% Similarity=0.062 Sum_probs=71.0
Q ss_pred CCCcEEEEeCCCCCChh-------hHH----HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHH----
Q 011425 64 TPLPCVVYCHGNSGCRA-------DAN----EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSY---- 128 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~-------~~~----~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~---- 128 (486)
...++|||+||++++.. .|. .+++.|.++||.|+++|++|+|.+.. ...++...++.
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~--------~a~~l~~~i~~~~vD 75 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD--------RACEAYAQLVGGTVD 75 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH--------HHHHHHHHHHCEEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc--------cHHHHHHHHHhhhhh
Confidence 35678999999988642 354 34588888899999999999997641 12233333321
Q ss_pred ----H-----------------HhcCCCCcEEEEEEcchHHHHHHHHhc-------------------CC-------Ccc
Q 011425 129 ----L-----------------RGNKQTSRIGLWGRSMGAVTSLLYGAE-------------------DP-------SIA 161 (486)
Q Consensus 129 ----l-----------------~~~~~~~~i~LvGhSmGG~lAl~~A~~-------------------~p-------~v~ 161 (486)
+ ....+..+++|+||||||.++..++.. +| .|.
T Consensus 76 y~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~ 155 (387)
T 2dsn_A 76 YGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVL 155 (387)
T ss_dssp CCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEE
T ss_pred hhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCcccccccccee
Confidence 1 011345899999999999999999872 23 499
Q ss_pred EEEEcCCccC
Q 011425 162 GMVLDSAFSD 171 (486)
Q Consensus 162 ~lVl~sp~~~ 171 (486)
++|+++++..
T Consensus 156 sLV~i~tP~~ 165 (387)
T 2dsn_A 156 SVTTIATPHD 165 (387)
T ss_dssp EEEEESCCTT
T ss_pred EEEEECCCCC
Confidence 9999987653
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=98.97 E-value=8.3e-10 Score=113.65 Aligned_cols=104 Identities=15% Similarity=0.136 Sum_probs=70.5
Q ss_pred CCCcEEEEeCCCCCC--------hhhHH----HHHHHhccCCeEEEEEcCCCCCCCCCCCCCC-----------------
Q 011425 64 TPLPCVVYCHGNSGC--------RADAN----EAAVILLPSNITLFTLDFSGSGLSDGDYVSL----------------- 114 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~--------~~~~~----~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~----------------- 114 (486)
+.+++|||+||++++ ...|. .++..|.+.||.|+++|++|+|.|.......
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 456889999999874 23453 4888888889999999999999875210000
Q ss_pred --Ccc-hHHHHHHHHHHHHhcCC-CCcEEEEEEcchHHHHHHHHhc--------------------------CCC-ccEE
Q 011425 115 --GWH-EKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAE--------------------------DPS-IAGM 163 (486)
Q Consensus 115 --~~~-~~~Dl~~~i~~l~~~~~-~~~i~LvGhSmGG~lAl~~A~~--------------------------~p~-v~~l 163 (486)
++. .++|+.+++ +... ..+++|+||||||.+++.+|.. +|+ |.++
T Consensus 130 ~~~~~~~a~dl~~ll----~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~sl 205 (431)
T 2hih_A 130 KYGHERYGKTYEGVL----KDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSI 205 (431)
T ss_dssp HHTCCSEEEEECCSC----TTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEE
T ss_pred cCCHHHHHHHHHHHH----HHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEE
Confidence 000 001111111 1112 3789999999999999998865 565 9999
Q ss_pred EEcCCccC
Q 011425 164 VLDSAFSD 171 (486)
Q Consensus 164 Vl~sp~~~ 171 (486)
|+++++..
T Consensus 206 v~i~tP~~ 213 (431)
T 2hih_A 206 TTIATPHN 213 (431)
T ss_dssp EEESCCTT
T ss_pred EEECCCCC
Confidence 99998754
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.82 E-value=3.1e-09 Score=111.95 Aligned_cols=124 Identities=15% Similarity=0.250 Sum_probs=87.8
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCC-eEEEEEcCC----CCCCCCCCCC---
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSN-ITLFTLDFS----GSGLSDGDYV--- 112 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~G-y~Vv~~D~r----G~G~S~~~~~--- 112 (486)
+.|+..| .+|.|.. ...+.|+||++||++ ++..........|+.+| +.|+.+||| |++.+.....
T Consensus 81 ~edcl~l--~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~ 156 (498)
T 2ogt_A 81 SEDGLYL--NIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAY 156 (498)
T ss_dssp BSCCCEE--EEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGG
T ss_pred CCCCcEE--EEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccc
Confidence 3455444 5778862 345689999999997 55444323345566665 999999999 8887764321
Q ss_pred -CCCcchHHHHHHHHHHHHhcC---C--CCcEEEEEEcchHHHHHHHHhcC--CC-ccEEEEcCCccC
Q 011425 113 -SLGWHEKDDLKVVVSYLRGNK---Q--TSRIGLWGRSMGAVTSLLYGAED--PS-IAGMVLDSAFSD 171 (486)
Q Consensus 113 -~~~~~~~~Dl~~~i~~l~~~~---~--~~~i~LvGhSmGG~lAl~~A~~~--p~-v~~lVl~sp~~~ 171 (486)
..+-..+.|..++++|++++. + .++|.|+|+|.||.+++.++... .. ++++|+.++...
T Consensus 157 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 157 AQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 111123789999999998863 2 26899999999999998887653 22 999999998654
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.80 E-value=5.8e-09 Score=109.56 Aligned_cols=120 Identities=18% Similarity=0.231 Sum_probs=83.2
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCC-eEEEEEcCC----CCCCCCCCCC-CCCcchH
Q 011425 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSN-ITLFTLDFS----GSGLSDGDYV-SLGWHEK 119 (486)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~G-y~Vv~~D~r----G~G~S~~~~~-~~~~~~~ 119 (486)
-|...+|.|... ..+.|+||++||++ ++...+......|+.+| +.|+.+||| |++.+..... ..+....
T Consensus 82 cL~l~v~~P~~~--~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl 159 (489)
T 1qe3_A 82 CLYVNVFAPDTP--SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGL 159 (489)
T ss_dssp CCEEEEEEECSS--CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHH
T ss_pred CCEEEEEeCCCC--CCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcch
Confidence 356668888642 23489999999975 44333323345566654 999999999 5655432111 1111237
Q ss_pred HHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhcC--CC-ccEEEEcCCcc
Q 011425 120 DDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAED--PS-IAGMVLDSAFS 170 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~~--p~-v~~lVl~sp~~ 170 (486)
.|+.++++|+++.. +.++|.|+|+|+||.+++.++... +. ++++|+.++..
T Consensus 160 ~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 160 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 89999999998863 226899999999999998887653 23 89999999866
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.62 E-value=4e-08 Score=104.18 Aligned_cols=119 Identities=17% Similarity=0.224 Sum_probs=80.9
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCC----CCCCCCCCCCCCCcchHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFS----GSGLSDGDYVSLGWHEKDD 121 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~r----G~G~S~~~~~~~~~~~~~D 121 (486)
|...+|.|... ..+.|+||++||++ ++..........|+. .|+.|+.++|| |++.+.+.....+-..+.|
T Consensus 93 l~lnv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D 170 (529)
T 1p0i_A 93 LYLNVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFD 170 (529)
T ss_dssp CEEEEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHH
T ss_pred CeEEEeeCCCC--CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccHHH
Confidence 44457888642 25679999999975 333321122344554 59999999999 4444422221111123789
Q ss_pred HHHHHHHHHhcC---C--CCcEEEEEEcchHHHHHHHHhcCC--C-ccEEEEcCCcc
Q 011425 122 LKVVVSYLRGNK---Q--TSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFS 170 (486)
Q Consensus 122 l~~~i~~l~~~~---~--~~~i~LvGhSmGG~lAl~~A~~~p--~-v~~lVl~sp~~ 170 (486)
..++++|++++. + .++|.|+|+|.||.+++.++.... . ++++|+.++..
T Consensus 171 ~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 171 QQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 999999998863 2 268999999999999988876542 2 89999998854
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.62 E-value=3.7e-08 Score=104.79 Aligned_cols=122 Identities=18% Similarity=0.226 Sum_probs=81.2
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCC----CCCCCCCCCCCCCc
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFS----GSGLSDGDYVSLGW 116 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~r----G~G~S~~~~~~~~~ 116 (486)
.|...| .+|.|... ...+.|+||++||++ ++..........|+. .|+.|+.++|| |++.+.+......-
T Consensus 94 edcl~l--~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n 170 (543)
T 2ha2_A 94 EDCLYL--NVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170 (543)
T ss_dssp SCCCEE--EEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSC
T ss_pred CcCCeE--EEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCc
Confidence 455444 57788642 234569999999986 333321122344554 69999999999 44444221111111
Q ss_pred chHHHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhcC--C-CccEEEEcCCc
Q 011425 117 HEKDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAED--P-SIAGMVLDSAF 169 (486)
Q Consensus 117 ~~~~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~~--p-~v~~lVl~sp~ 169 (486)
..+.|..++++|++++. +.++|.|+|+|.||.+++.++... + -++++|+.++.
T Consensus 171 ~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 231 (543)
T 2ha2_A 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGT 231 (543)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCC
Confidence 23789999999998863 227999999999999998776653 2 38999998874
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=9.4e-08 Score=101.62 Aligned_cols=121 Identities=15% Similarity=0.267 Sum_probs=82.3
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhc-cCCeEEEEEcCC----CCCCCCCCCCCCCc
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILL-PSNITLFTLDFS----GSGLSDGDYVSLGW 116 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~-~~Gy~Vv~~D~r----G~G~S~~~~~~~~~ 116 (486)
.|.. ...+|.|.....+.+.|+||++||++ ++...+.. ..|+ ..|+.|+.+||| |++.+........
T Consensus 96 edcl--~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n- 170 (542)
T 2h7c_A 96 EDCL--YLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGN- 170 (542)
T ss_dssp SCCC--EEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCC-
T ss_pred CCCc--EEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCcccCccc-
Confidence 4554 44578897544446789999999975 33332221 1233 369999999999 4544432211111
Q ss_pred chHHHHHHHHHHHHhcC---C--CCcEEEEEEcchHHHHHHHHhcC--CC-ccEEEEcCCcc
Q 011425 117 HEKDDLKVVVSYLRGNK---Q--TSRIGLWGRSMGAVTSLLYGAED--PS-IAGMVLDSAFS 170 (486)
Q Consensus 117 ~~~~Dl~~~i~~l~~~~---~--~~~i~LvGhSmGG~lAl~~A~~~--p~-v~~lVl~sp~~ 170 (486)
..+.|..++++|++++. + .++|.|+|+|.||.++..++... +. ++++|+.++..
T Consensus 171 ~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 171 WGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 23689999999998763 2 26999999999999998887762 33 89999988754
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=3.3e-07 Score=90.62 Aligned_cols=138 Identities=9% Similarity=0.023 Sum_probs=82.6
Q ss_pred CcEEEEEEcchHHHHHHHHhcCCC-cc-EEEEcCCcc--CHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccc
Q 011425 136 SRIGLWGRSMGAVTSLLYGAEDPS-IA-GMVLDSAFS--DLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (486)
Q Consensus 136 ~~i~LvGhSmGG~lAl~~A~~~p~-v~-~lVl~sp~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 211 (486)
++|+|+|+|+||++++.++..+|+ ++ +++++++.. ...... ........++... ....+ ......
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~--~~~~~~~~~~~~~--~~~~~-~~~~~~------ 79 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY--YTSCMYNGYPSIT--TPTAN-MKSWSG------ 79 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC--GGGGSTTCCCCCH--HHHHH-HHHHBT------
T ss_pred ceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH--HHHHhhccCCCCC--CHHHH-HHHhhc------
Confidence 689999999999999999999998 77 777665421 110000 0000000001000 00011 111100
Q ss_pred cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-----CcEEEEeCC-CCCCC--Ch---------------
Q 011425 212 MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-----DKNIIKFDG-DHNSS--RP--------------- 268 (486)
Q Consensus 212 ~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-----~~~l~~~~g-gH~~~--~p--------------- 268 (486)
...+....+. ..|+||+||+.|.+||++.++++++.+.. ..+++.+++ ||... ..
T Consensus 80 ~~i~~~~~l~--~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi 157 (318)
T 2d81_A 80 NQIASVANLG--QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYI 157 (318)
T ss_dssp TTBCCGGGGG--GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCE
T ss_pred ccCChhHcCC--CCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcc
Confidence 1111112211 36999999999999999999999998752 457888898 99743 11
Q ss_pred ----HHHHHHHHHHHHHhcCCC
Q 011425 269 ----QFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 269 ----~~~~~~I~~FL~~~l~~~ 286 (486)
-.-...|.+||...+.++
T Consensus 158 ~~~~~d~~~~i~~ff~g~~~~~ 179 (318)
T 2d81_A 158 SNCNYDGAGAALKWIYGSLNAR 179 (318)
T ss_dssp EECSSCHHHHHHHHHHSSCCCC
T ss_pred cCCCChHHHHHHHHHhccCCCC
Confidence 234567899998776543
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.55 E-value=5.7e-08 Score=103.18 Aligned_cols=122 Identities=16% Similarity=0.193 Sum_probs=82.3
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhc-cCCeEEEEEcCC----CCCCCCCCCCCCCc
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILL-PSNITLFTLDFS----GSGLSDGDYVSLGW 116 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~-~~Gy~Vv~~D~r----G~G~S~~~~~~~~~ 116 (486)
.|... ..+|.|... ..+.|+||++||++ ++..........|+ ..|+.|+.++|| |++.+.+.....+-
T Consensus 92 edcl~--lnv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n 167 (537)
T 1ea5_A 92 EDCLY--LNIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGN 167 (537)
T ss_dssp SCCCE--EEEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSC
T ss_pred CcCCe--EEEeccCCC--CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCc
Confidence 45444 457888642 25689999999975 33322112234455 569999999999 44444222211111
Q ss_pred chHHHHHHHHHHHHhcC---C--CCcEEEEEEcchHHHHHHHHhcC---CCccEEEEcCCcc
Q 011425 117 HEKDDLKVVVSYLRGNK---Q--TSRIGLWGRSMGAVTSLLYGAED---PSIAGMVLDSAFS 170 (486)
Q Consensus 117 ~~~~Dl~~~i~~l~~~~---~--~~~i~LvGhSmGG~lAl~~A~~~---p~v~~lVl~sp~~ 170 (486)
..+.|..++++|++++. + .++|.|+|+|.||.+++.++... +-++++|+.++..
T Consensus 168 ~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 168 VGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred cccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 23789999999998863 2 27999999999999998877652 2389999998854
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.1e-07 Score=101.38 Aligned_cols=118 Identities=18% Similarity=0.312 Sum_probs=79.3
Q ss_pred EEEEEEec-----CCCCCCCC----CcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCC----CCCCCCCCCC
Q 011425 50 LQCSHYMP-----SPFPEDTP----LPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSG----SGLSDGDYVS 113 (486)
Q Consensus 50 L~~~~~~P-----~~~~~~~~----~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG----~G~S~~~~~~ 113 (486)
|...+|.| ... ...+ .|+||++||++ ++..........|++.|+.|+.+|||. +..+......
T Consensus 91 L~lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~~ 169 (551)
T 2fj0_A 91 IHANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVP 169 (551)
T ss_dssp CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSCC
T ss_pred eEEEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccCCC
Confidence 55567888 432 2233 79999999965 333322223456777899999999994 2322211111
Q ss_pred CCcchHHHHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHhcC--CC-ccEEEEcCCc
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAED--PS-IAGMVLDSAF 169 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~~~--p~-v~~lVl~sp~ 169 (486)
+...+.|+.++++|++++.. .++|.|+|+|.||.+++.++... +. ++++|+.++.
T Consensus 170 -~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 170 -GNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp -SCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred -CchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 11237899999999988632 26899999999999999887662 33 8999998875
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.3e-07 Score=99.98 Aligned_cols=121 Identities=17% Similarity=0.188 Sum_probs=78.8
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhHHHH-HHHhccCCeEEEEEcCC----CCCCCCCCCCC-CCcchHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADANEA-AVILLPSNITLFTLDFS----GSGLSDGDYVS-LGWHEKD 120 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~~~~-~~~L~~~Gy~Vv~~D~r----G~G~S~~~~~~-~~~~~~~ 120 (486)
|...+|.|.......+.|+||++||++. +...+... .......|+.|+.+||| |++.+...... ..-..+.
T Consensus 86 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~ 165 (522)
T 1ukc_A 86 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLL 165 (522)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHH
T ss_pred CEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHH
Confidence 4556788875434456899999999863 22222211 11113569999999999 44444321000 0112378
Q ss_pred HHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHhcC----CC-ccEEEEcCCcc
Q 011425 121 DLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAED----PS-IAGMVLDSAFS 170 (486)
Q Consensus 121 Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~~~----p~-v~~lVl~sp~~ 170 (486)
|..++++|++++.. .++|.|+|+|.||..+..++... +. ++++|+.++..
T Consensus 166 D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 166 DQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 99999999988632 26899999999998776655442 33 89999988764
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=9.5e-07 Score=94.70 Aligned_cols=107 Identities=16% Similarity=0.178 Sum_probs=71.1
Q ss_pred CCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCC----CCCCCCC------CCCCCCcchHHHHHHHHHHH
Q 011425 64 TPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFS----GSGLSDG------DYVSLGWHEKDDLKVVVSYL 129 (486)
Q Consensus 64 ~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~r----G~G~S~~------~~~~~~~~~~~Dl~~~i~~l 129 (486)
.+.|+||++||++ ++..........|+. .|+.|+.++|| |++.... .....+-..+.|..++++|+
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv 218 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWL 218 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHH
Confidence 4579999999975 333222112234444 58999999999 4433211 00111112378999999999
Q ss_pred HhcCC-----CCcEEEEEEcchHHHHHHHHhcCC--C-ccEEEEcCCcc
Q 011425 130 RGNKQ-----TSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFS 170 (486)
Q Consensus 130 ~~~~~-----~~~i~LvGhSmGG~lAl~~A~~~p--~-v~~lVl~sp~~ 170 (486)
+++.. .++|.|+|+|.||.++..++.... . ++++|+.++..
T Consensus 219 ~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 219 KDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 98742 268999999999998877766532 2 89999988753
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=8.7e-07 Score=93.94 Aligned_cols=120 Identities=15% Similarity=0.205 Sum_probs=77.5
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhH--HHHHH-H-hccCCeEEEEEcCCCC----CCCCCC-CCCCCcc
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADA--NEAAV-I-LLPSNITLFTLDFSGS----GLSDGD-YVSLGWH 117 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~--~~~~~-~-L~~~Gy~Vv~~D~rG~----G~S~~~-~~~~~~~ 117 (486)
|...+|.|.......+.|+||++||++ ++...+ ..++. . ....|+.|+.+|||.- ..+... .....-.
T Consensus 98 l~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~ 177 (534)
T 1llf_A 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNA 177 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTH
T ss_pred eEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCch
Confidence 455688897543445689999999986 333322 22332 2 2345899999999942 111100 0001112
Q ss_pred hHHHHHHHHHHHHhcC-----CCCcEEEEEEcchHHHHHHHHhcC--------CC-ccEEEEcCCc
Q 011425 118 EKDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAED--------PS-IAGMVLDSAF 169 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~-----~~~~i~LvGhSmGG~lAl~~A~~~--------p~-v~~lVl~sp~ 169 (486)
.+.|..++++|++++. +.++|.|+|+|.||..++.++... +. ++++|+.++.
T Consensus 178 gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 178 GLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 3789999999998863 227899999999998777665542 22 8999999874
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.27 E-value=3.8e-07 Score=96.90 Aligned_cols=120 Identities=15% Similarity=0.141 Sum_probs=77.5
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCCC---hhhH--HHHHH-Hhc-cCCeEEEEEcCCCC----CCCCCCC-CCCCcc
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGC---RADA--NEAAV-ILL-PSNITLFTLDFSGS----GLSDGDY-VSLGWH 117 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg~---~~~~--~~~~~-~L~-~~Gy~Vv~~D~rG~----G~S~~~~-~~~~~~ 117 (486)
|...+|.|.......+.|+||++||++-. ...+ ..++. .++ ..|+.|+.+|||.- ....... ...+-.
T Consensus 106 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~ 185 (544)
T 1thg_A 106 LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNA 185 (544)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTH
T ss_pred eEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCch
Confidence 44557888754344568999999998632 2222 12332 233 34899999999942 1111000 001112
Q ss_pred hHHHHHHHHHHHHhcC---C--CCcEEEEEEcchHHHHHHHHhcC--------C-CccEEEEcCCc
Q 011425 118 EKDDLKVVVSYLRGNK---Q--TSRIGLWGRSMGAVTSLLYGAED--------P-SIAGMVLDSAF 169 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~---~--~~~i~LvGhSmGG~lAl~~A~~~--------p-~v~~lVl~sp~ 169 (486)
.+.|..++++|++++. + .++|.|+|+|.||.+++.++... . -++++|+.++.
T Consensus 186 gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 186 GLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred hHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 3789999999998863 2 27899999999999988776642 2 28999998874
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.23 E-value=9.2e-07 Score=94.53 Aligned_cols=124 Identities=16% Similarity=0.233 Sum_probs=78.4
Q ss_pred EcCCCcEEEEEEEecCCCC-CCCCCcEEEEeCCCC---CChhhH------HHHHHHhcc-CCeEEEEEcCC----CCCCC
Q 011425 43 RNARGHVLQCSHYMPSPFP-EDTPLPCVVYCHGNS---GCRADA------NEAAVILLP-SNITLFTLDFS----GSGLS 107 (486)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~-~~~~~p~VV~lHG~g---g~~~~~------~~~~~~L~~-~Gy~Vv~~D~r----G~G~S 107 (486)
.+.|... ..+|.|.... ...+.|+||++||++ ++.... ......|+. .|+.|+.++|| |++..
T Consensus 76 ~sedcl~--lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~ 153 (579)
T 2bce_A 76 GNEDCLY--LNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLST 153 (579)
T ss_dssp SCSCCCE--EEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred CCCCCCE--EEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcC
Confidence 3445544 4578886432 235679999999986 222110 001233433 37999999999 44433
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHhcC---C--CCcEEEEEEcchHHHHHHHHhc--CCC-ccEEEEcCCc
Q 011425 108 DGDYVSLGWHEKDDLKVVVSYLRGNK---Q--TSRIGLWGRSMGAVTSLLYGAE--DPS-IAGMVLDSAF 169 (486)
Q Consensus 108 ~~~~~~~~~~~~~Dl~~~i~~l~~~~---~--~~~i~LvGhSmGG~lAl~~A~~--~p~-v~~lVl~sp~ 169 (486)
........ ..+.|..++++|++++. + .++|.|+|+|.||.++..++.. ... ++++|+.++.
T Consensus 154 ~~~~~pgn-~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 154 GDSNLPGN-YGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp SSTTCCCC-HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCCCCCc-cchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 21111111 12689999999998863 2 2689999999999999877654 223 8899988764
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.8e-06 Score=92.27 Aligned_cols=116 Identities=21% Similarity=0.267 Sum_probs=75.6
Q ss_pred EEEEEEecCCCC---CCCCCcEEEEeCCCC---CChhhHHHHHHHhccC-CeEEEEEcCC----CCCCCCCCCCCCCcch
Q 011425 50 LQCSHYMPSPFP---EDTPLPCVVYCHGNS---GCRADANEAAVILLPS-NITLFTLDFS----GSGLSDGDYVSLGWHE 118 (486)
Q Consensus 50 L~~~~~~P~~~~---~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~-Gy~Vv~~D~r----G~G~S~~~~~~~~~~~ 118 (486)
|...+|.|.... ...+.|+||++||++ ++...+.. ..|+.. ++.|+.+||| |+..+........ ..
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n-~g 188 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGN-YG 188 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCC-HH
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCc-cc
Confidence 455588886431 124579999999986 33332221 234443 6999999999 3333321111111 23
Q ss_pred HHHHHHHHHHHHhcC---C--CCcEEEEEEcchHHHHHHHHhcCC---C-ccEEEEcCC
Q 011425 119 KDDLKVVVSYLRGNK---Q--TSRIGLWGRSMGAVTSLLYGAEDP---S-IAGMVLDSA 168 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~---~--~~~i~LvGhSmGG~lAl~~A~~~p---~-v~~lVl~sp 168 (486)
+.|..++++|++++. + .++|.|+|+|.||.++..++.... . +.++|+.++
T Consensus 189 l~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 189 LLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 789999999998853 2 268999999999999988776532 3 788888775
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.18 E-value=4.4e-05 Score=78.94 Aligned_cols=137 Identities=13% Similarity=0.153 Sum_probs=87.3
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHH-----------hc------cCCeEEEEEc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI-----------LL------PSNITLFTLD 100 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~-----------L~------~~Gy~Vv~~D 100 (486)
..-.+...++..|.++.+.... .....|+||++||+.|++..+..+.+. +. .+..+++-+|
T Consensus 22 ~sGyv~v~~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiD 99 (452)
T 1ivy_A 22 YSGYLKSSGSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLE 99 (452)
T ss_dssp EEEEEECSTTEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEEC
T ss_pred eEEEEeeCCCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEe
Confidence 3444555567888887664322 224589999999999987765333211 10 1247899999
Q ss_pred C-CCCCCCCCCCCCCCcc---hHHH-HHHHHHHHHhc--CCCCcEEEEEEcchHHHHHHHHhc----CC-CccEEEEcCC
Q 011425 101 F-SGSGLSDGDYVSLGWH---EKDD-LKVVVSYLRGN--KQTSRIGLWGRSMGAVTSLLYGAE----DP-SIAGMVLDSA 168 (486)
Q Consensus 101 ~-rG~G~S~~~~~~~~~~---~~~D-l~~~i~~l~~~--~~~~~i~LvGhSmGG~lAl~~A~~----~p-~v~~lVl~sp 168 (486)
. +|.|.|-......... .+.| +..+.+|+... +...+++|+|+|+||..+..+|.. .+ .++++++.+|
T Consensus 100 qP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~ 179 (452)
T 1ivy_A 100 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp CSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred cCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCC
Confidence 6 7999986332222111 1333 34455566553 334799999999999966555543 22 2899999999
Q ss_pred ccCHHHHH
Q 011425 169 FSDLFDLM 176 (486)
Q Consensus 169 ~~~~~~~~ 176 (486)
..+.....
T Consensus 180 ~~d~~~~~ 187 (452)
T 1ivy_A 180 LSSYEQND 187 (452)
T ss_dssp CSBHHHHH
T ss_pred ccChhhhh
Confidence 98865443
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2.7e-05 Score=73.94 Aligned_cols=134 Identities=16% Similarity=0.200 Sum_probs=87.6
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-HHHHH------------------HhccCCeEEEEEc
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-NEAAV------------------ILLPSNITLFTLD 100 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-~~~~~------------------~L~~~Gy~Vv~~D 100 (486)
+.+....|..|.++.+.... .....|+||+++|+.|++..+ ..+.+ .|.+ -.+++-+|
T Consensus 24 ~~v~~~~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvlfiD 100 (255)
T 1whs_A 24 ITVDEGAGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNK-VANVLFLD 100 (255)
T ss_dssp EEEETTTTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGG-TSEEEEEC
T ss_pred EECCCCCCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccc-cCCEEEEe
Confidence 44444568889988775432 235689999999999988775 33321 1112 37899999
Q ss_pred C-CCCCCCCCCCC-C---CCc-chHHHHHHHHHHHHhcC---CCCcEEEEEEcchHHHHHHHHhc-----CCC--ccEEE
Q 011425 101 F-SGSGLSDGDYV-S---LGW-HEKDDLKVVVSYLRGNK---QTSRIGLWGRSMGAVTSLLYGAE-----DPS--IAGMV 164 (486)
Q Consensus 101 ~-rG~G~S~~~~~-~---~~~-~~~~Dl~~~i~~l~~~~---~~~~i~LvGhSmGG~lAl~~A~~-----~p~--v~~lV 164 (486)
. .|.|.|-.... . .+. ..+.|+..+++...+.. ...+++|+|.|+||..+..+|.. .+. ++|++
T Consensus 101 qPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ 180 (255)
T 1whs_A 101 SPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFM 180 (255)
T ss_dssp CSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred cCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEE
Confidence 7 59998853322 1 111 12455555554333322 23689999999999998777653 222 89999
Q ss_pred EcCCccCHHHHH
Q 011425 165 LDSAFSDLFDLM 176 (486)
Q Consensus 165 l~sp~~~~~~~~ 176 (486)
+.+|..+.....
T Consensus 181 ign~~~d~~~~~ 192 (255)
T 1whs_A 181 VGNGLIDDYHDY 192 (255)
T ss_dssp EEEECCBHHHHH
T ss_pred ecCCccCHHHhh
Confidence 999999865443
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.1e-05 Score=94.54 Aligned_cols=190 Identities=10% Similarity=0.031 Sum_probs=104.3
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
+..+.++++|+.++....|..++..|. .+.|+++++++.. ..+..+. +.++.....+++.++||
T Consensus 1056 ~~~~~L~~l~~~~g~~~~y~~la~~L~--~~~v~~l~~~~~~-----------~~~~~~~---~~i~~~~~~gp~~l~G~ 1119 (1304)
T 2vsq_A 1056 DQEQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEEE-----------DRLDRYA---DLIQKLQPEGPLTLFGY 1119 (1304)
T ss_dssp TSCCEEECCCCTTCBGGGGHHHHTTCC--SCEEEECBCCCST-----------THHHHHH---HHHHHHCCSSCEEEEEE
T ss_pred ccCCcceeecccccchHHHHHHHhccc--ccceEeecccCHH-----------HHHHHHH---HHHHHhCCCCCeEEEEe
Confidence 345789999999999888888877775 5889988874221 1123333 33333333468999999
Q ss_pred cchHHHHHHHHhcCC----CccEEEEcCCccCH-----HH-----HHHHHHHHHh----hh---CCchhHHHHHHHHHHH
Q 011425 144 SMGAVTSLLYGAEDP----SIAGMVLDSAFSDL-----FD-----LMLELVDVYK----IR---LPKFTVKMAVQYMRRV 202 (486)
Q Consensus 144 SmGG~lAl~~A~~~p----~v~~lVl~sp~~~~-----~~-----~~~~~~~~~~----~~---~p~~~~~~~~~~~~~~ 202 (486)
||||.+|..+|.+.. .+..++++++.... .. ....+..... .. +.......+...+.
T Consensus 1120 S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~-- 1197 (1304)
T 2vsq_A 1120 SAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYS-- 1197 (1304)
T ss_dssp TTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-----CHHHHHHHHHTTCC-------CTTTGGGHHHHHHHHH--
T ss_pred cCCchHHHHHHHHHHhCCCceeEEEEecCcccccccccccccchhhHHHHHHhhhhhhhhcchhcchHHHHHHHHHHH--
Confidence 999999999887532 27778777654210 00 0000000000 00 00000011111100
Q ss_pred HhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC-C---hHHHHHHHHHH
Q 011425 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS-R---PQFYYDSVSIF 278 (486)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~-~---p~~~~~~I~~F 278 (486)
....+ .....+.+|++++.|..|... ......+.+...+..+++.++|+|+.+ . .+.+.+.|.+|
T Consensus 1198 --~~~~~--------~~~~~~~~pv~l~~~~~~~~~-~~~~~~W~~~~~~~~~~~~v~G~H~~ml~~~~~~~~a~~l~~~ 1266 (1304)
T 2vsq_A 1198 --YYVNL--------ISTGQVKADIDLLTSGADFDI-PEWLASWEEATTGVYRMKRGFGTHAEMLQGETLDRNAEILLEF 1266 (1304)
T ss_dssp --HHHC-------------CBSSEEEEEECSSCCCC-CSSEECSSTTBSSCCCEEECSSCTTGGGSHHHHHHHHHHHHHH
T ss_pred --HHHHH--------hccCCcCCCEEEEEecCcccc-ccchhhHHHHhCCCeEEEEeCCCHHHHCCCHHHHHHHHHHHHH
Confidence 00000 011567899999999988632 221122222233566788899999866 3 23566667777
Q ss_pred HHHh
Q 011425 279 FYNV 282 (486)
Q Consensus 279 L~~~ 282 (486)
|...
T Consensus 1267 L~~~ 1270 (1304)
T 2vsq_A 1267 LNTQ 1270 (1304)
T ss_dssp HHCC
T ss_pred Hhcc
Confidence 7644
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00041 Score=72.20 Aligned_cols=107 Identities=17% Similarity=0.046 Sum_probs=76.1
Q ss_pred CCCcEEEEeCCCCCChhhHHH---HHHHhcc-CCeEEEEEcCCCCCCCCCCC------CCCCc----chHHHHHHHHHHH
Q 011425 64 TPLPCVVYCHGNSGCRADANE---AAVILLP-SNITLFTLDFSGSGLSDGDY------VSLGW----HEKDDLKVVVSYL 129 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~---~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~------~~~~~----~~~~Dl~~~i~~l 129 (486)
+..|++|++-|-+ ....+.. +...+++ .|-.+|.+++|.+|.|.... ....+ +.+.|++..+.++
T Consensus 41 ~~gPIfl~~gGEg-~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~ 119 (472)
T 4ebb_A 41 GEGPIFFYTGNEG-DVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRAL 119 (472)
T ss_dssp TTCCEEEEECCSS-CHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCc-cccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHH
Confidence 3468888876654 3322211 2222333 37899999999999996421 11222 2378899999999
Q ss_pred HhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 130 RGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 130 ~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
+..+.. .+++++|-|+||++|..+-.++|+ |.|.+..+++..
T Consensus 120 k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 120 RRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 887554 689999999999999999999999 888888777653
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=4.8e-05 Score=73.21 Aligned_cols=107 Identities=16% Similarity=0.082 Sum_probs=72.0
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEE-EcCCCCCCCCCCCCCCCc----c-hHHH
Q 011425 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFT-LDFSGSGLSDGDYVSLGW----H-EKDD 121 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~-~D~rG~G~S~~~~~~~~~----~-~~~D 121 (486)
..+.++++.+. ..+.+||.+||... +.+++.+.++.++. .|+++.+ ....++ . ..++
T Consensus 61 ~~~~~~v~~~~-----~~~~iVva~RGT~~-------~~d~l~d~~~~~~~~~~~~~~~-----~vh~Gf~~~~~~~~~~ 123 (269)
T 1tib_A 61 GDVTGFLALDN-----TNKLIVLSFRGSRS-------IENWIGNLNFDLKEINDICSGC-----RGHDGFTSSWRSVADT 123 (269)
T ss_dssp TTEEEEEEEET-----TTTEEEEEECCCSC-------THHHHTCCCCCEEECTTTSTTC-----EEEHHHHHHHHHHHHH
T ss_pred cCcEEEEEEEC-----CCCEEEEEEeCCCC-------HHHHHHhcCeeeeecCCCCCCC-----EecHHHHHHHHHHHHH
Confidence 44566677653 45678999999963 34567777787776 5655311 111111 1 1467
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC----CccEEEEcCCccC
Q 011425 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFSD 171 (486)
Q Consensus 122 l~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p----~v~~lVl~sp~~~ 171 (486)
+...++.+.+..+..+++++||||||.+|..++.... .+.+++..+|...
T Consensus 124 ~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~vg 177 (269)
T 1tib_A 124 LRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVG 177 (269)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCCB
T ss_pred HHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCCC
Confidence 7777777777666679999999999999999988743 2677776666554
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0049 Score=59.71 Aligned_cols=138 Identities=15% Similarity=0.160 Sum_probs=88.7
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHH-----------hcc------CCeEEEEEc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI-----------LLP------SNITLFTLD 100 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~-----------L~~------~Gy~Vv~~D 100 (486)
..-.+...++..|.++.+.... .....|+||++-|+.|++..+..+.+. +.. .-.+++.+|
T Consensus 24 ysGyv~v~~~~~lFywf~es~~--~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD 101 (300)
T 4az3_A 24 YSGYLKGSGSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLE 101 (300)
T ss_dssp EEEEEECSTTEEEEEEEECCSS--CTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEEC
T ss_pred eeeeeecCCCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhc
Confidence 3444555678889888775432 335689999999999988776444321 110 135799999
Q ss_pred CC-CCCCCCCCCCCCCcch---HHHHHHHHH-HHHhcC--CCCcEEEEEEcchHHHHHHHHhc---CCC--ccEEEEcCC
Q 011425 101 FS-GSGLSDGDYVSLGWHE---KDDLKVVVS-YLRGNK--QTSRIGLWGRSMGAVTSLLYGAE---DPS--IAGMVLDSA 168 (486)
Q Consensus 101 ~r-G~G~S~~~~~~~~~~~---~~Dl~~~i~-~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~---~p~--v~~lVl~sp 168 (486)
.| |.|-|-.......... +.|+...+. |+.... ...+++|.|-|+||..+-.+|.. .+. ++++++.++
T Consensus 102 ~PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg 181 (300)
T 4az3_A 102 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 181 (300)
T ss_dssp CSTTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred CCCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCC
Confidence 77 7887754332222121 344444443 333322 23789999999999998877754 333 899999999
Q ss_pred ccCHHHHHH
Q 011425 169 FSDLFDLML 177 (486)
Q Consensus 169 ~~~~~~~~~ 177 (486)
..+......
T Consensus 182 ~~d~~~~~~ 190 (300)
T 4az3_A 182 LSSYEQNDN 190 (300)
T ss_dssp CSBHHHHHH
T ss_pred ccCHHHhcc
Confidence 998654433
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0015 Score=67.99 Aligned_cols=127 Identities=13% Similarity=0.196 Sum_probs=80.2
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHH-----------------HhccCCeEEEEEcC-CCCCCCC
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV-----------------ILLPSNITLFTLDF-SGSGLSD 108 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~-----------------~L~~~Gy~Vv~~D~-rG~G~S~ 108 (486)
+..+.++.+...........|+||+++|+.|++..+..+.+ .|.+ -..++-+|. .|.|.|-
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~-~~n~lfiDqPvGtGfSy 126 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWIS-KGDLLFIDQPTGTGFSV 126 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGG-TSEEEEECCSTTSTTCS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhh-cCCeEEEecCCCccccC
Confidence 67888888754311133568999999999998877643321 1111 368999997 6999885
Q ss_pred CCCCC--------CCcch---HHHHHHHHH-HHHhcC--CCCcEEEEEEcchHHHHHHHHhc-----------CCC--cc
Q 011425 109 GDYVS--------LGWHE---KDDLKVVVS-YLRGNK--QTSRIGLWGRSMGAVTSLLYGAE-----------DPS--IA 161 (486)
Q Consensus 109 ~~~~~--------~~~~~---~~Dl~~~i~-~l~~~~--~~~~i~LvGhSmGG~lAl~~A~~-----------~p~--v~ 161 (486)
..... ..... +.|+..++. |+.... ...+++|+|+|+||..+..+|.. .+. ++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLk 206 (483)
T 1ac5_A 127 EQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLK 206 (483)
T ss_dssp SCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEE
T ss_pred CcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCccccee
Confidence 43211 11111 334444333 333322 23789999999999998777642 122 89
Q ss_pred EEEEcCCccCHHH
Q 011425 162 GMVLDSAFSDLFD 174 (486)
Q Consensus 162 ~lVl~sp~~~~~~ 174 (486)
|+++.+|..+...
T Consensus 207 Gi~IGNg~~d~~~ 219 (483)
T 1ac5_A 207 ALLIGNGWIDPNT 219 (483)
T ss_dssp EEEEEEECCCHHH
T ss_pred eeEecCCcccchh
Confidence 9999888887543
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0012 Score=63.70 Aligned_cols=82 Identities=16% Similarity=0.204 Sum_probs=52.2
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-----HHHHHHHHHHHHhcCCCCcE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-----KDDLKVVVSYLRGNKQTSRI 138 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-----~~Dl~~~i~~l~~~~~~~~i 138 (486)
..+.+||.+||... ...++.+.++.+...|....|. ...++.. .+++...++.+.+..+..+|
T Consensus 72 ~~~~iVvafRGT~~-------~~d~~~d~~~~~~~~~~~~~~~-----vh~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i 139 (279)
T 1tia_A 72 TNSAVVLAFRGSYS-------VRNWVADATFVHTNPGLCDGCL-----AELGFWSSWKLVRDDIIKELKEVVAQNPNYEL 139 (279)
T ss_pred CCCEEEEEEeCcCC-------HHHHHHhCCcEeecCCCCCCCc-----cChhHHHHHHHHHHHHHHHHHHHHHHCCCCeE
Confidence 45779999999974 2334445456555545421111 1122211 34566666666666556799
Q ss_pred EEEEEcchHHHHHHHHhcC
Q 011425 139 GLWGRSMGAVTSLLYGAED 157 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~ 157 (486)
++.||||||.+|..+|...
T Consensus 140 ~vtGHSLGGalA~l~a~~l 158 (279)
T 1tia_A 140 VVVGHSLGAAVATLAATDL 158 (279)
T ss_pred EEEecCHHHHHHHHHHHHH
Confidence 9999999999999988764
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.008 Score=57.36 Aligned_cols=133 Identities=17% Similarity=0.294 Sum_probs=80.9
Q ss_pred EEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-HHHHHH-----------hcc------CCeEEEEEcC
Q 011425 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-NEAAVI-----------LLP------SNITLFTLDF 101 (486)
Q Consensus 40 i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-~~~~~~-----------L~~------~Gy~Vv~~D~ 101 (486)
+.+....|..|.++.+.... ......|+||+++|+.|++..+ ..+.+. +.. +-.+++-+|.
T Consensus 29 v~v~~~~~~~lFywf~es~~-~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDq 107 (270)
T 1gxs_A 29 VTIDDNNGRALYYWFQEADT-ADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAES 107 (270)
T ss_dssp EEEETTTTEEEEEEEECCCS-SCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECC
T ss_pred EEcCCCCCcEEEEEEEEecC-CCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEec
Confidence 44444567889988775411 1335689999999999988774 433211 111 1368999996
Q ss_pred -CCCCCCCCCCC-CCCcch---HHHHHHHHH-HHHhc--CCCCcEEEEEEcchHHHHHHHHh---cC---CC--ccEEEE
Q 011425 102 -SGSGLSDGDYV-SLGWHE---KDDLKVVVS-YLRGN--KQTSRIGLWGRSMGAVTSLLYGA---ED---PS--IAGMVL 165 (486)
Q Consensus 102 -rG~G~S~~~~~-~~~~~~---~~Dl~~~i~-~l~~~--~~~~~i~LvGhSmGG~lAl~~A~---~~---p~--v~~lVl 165 (486)
.|.|.|-.... .....+ +.|+..++. |+... +...+++|+|.| |-++...+.. .. +. ++|+++
T Consensus 108 PvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~i 186 (270)
T 1gxs_A 108 PAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLV 186 (270)
T ss_dssp STTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEE
T ss_pred cccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEE
Confidence 58898853321 111122 455555554 33332 223589999999 7555443322 22 22 899999
Q ss_pred cCCccCHHH
Q 011425 166 DSAFSDLFD 174 (486)
Q Consensus 166 ~sp~~~~~~ 174 (486)
.+|..+...
T Consensus 187 gn~~~d~~~ 195 (270)
T 1gxs_A 187 SSGLTNDHE 195 (270)
T ss_dssp ESCCCBHHH
T ss_pred eCCccChhh
Confidence 999998644
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0014 Score=62.76 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=45.0
Q ss_pred cEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc----h-HHHHHHHHHHHHhcCCCCcEEEE
Q 011425 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH----E-KDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~----~-~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
..|++.+-++.+...|. . ++.+...+++|... .....++. . .+++...+..+.+..+..+++++
T Consensus 73 ~~ivv~frGT~~~~dw~---~-----d~~~~~~~~p~~~~---~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~ 141 (269)
T 1tgl_A 73 KTIYIVFRGSSSIRNWI---A-----DLTFVPVSYPPVSG---TKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVT 141 (269)
T ss_pred CEEEEEECCCCCHHHHH---h-----hCceEeeeCCCCCC---CEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEE
Confidence 45555554444433332 1 45666777877411 11111111 1 34444555555544444679999
Q ss_pred EEcchHHHHHHHHhcC
Q 011425 142 GRSMGAVTSLLYGAED 157 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~ 157 (486)
||||||.+|..+|...
T Consensus 142 GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 142 GHSLGGATALLCALDL 157 (269)
T ss_pred eeCHHHHHHHHHHHHH
Confidence 9999999999888665
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00013 Score=90.05 Aligned_cols=92 Identities=15% Similarity=0.119 Sum_probs=0.0
Q ss_pred CCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHH-HHHHHHHHhcCCCCcEEEEEE
Q 011425 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL-KVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl-~~~i~~l~~~~~~~~i~LvGh 143 (486)
..+.++++|+.++....|..++..|. ..|+.+.++|. ..... ++++ ...++.++...+.+++.++||
T Consensus 2241 ~~~~Lfc~~~agG~~~~y~~l~~~l~---~~v~~lq~pg~------~~~~~---i~~la~~~~~~i~~~~p~gpy~L~G~ 2308 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVFHGLAAKLS---IPTYGLQCTGA------APLDS---IQSLASYYIECIRQVQPEGPYRIAGY 2308 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHHHHHHHhhC---CcEEEEecCCC------CCCCC---HHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 35678999999998888888877763 68888888861 11111 1221 222333333323468999999
Q ss_pred cchHHHHHHHHhcCCC----cc---EEEEcCC
Q 011425 144 SMGAVTSLLYGAEDPS----IA---GMVLDSA 168 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~----v~---~lVl~sp 168 (486)
||||.+|..+|.+... +. .++++++
T Consensus 2309 S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2309 SYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp --------------------------------
T ss_pred CHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 9999999998876432 43 5555554
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0077 Score=61.43 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=78.7
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHH-----------------hccCCeEEEEEcC-CCCCCC
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI-----------------LLPSNITLFTLDF-SGSGLS 107 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~-----------------L~~~Gy~Vv~~D~-rG~G~S 107 (486)
.+..|.++.+.... .....|+||+++|+.|++..+..+.+. +.+ -.+++-+|. .|.|.|
T Consensus 26 ~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~-~an~lfiDqPvGtGfS 102 (421)
T 1cpy_A 26 EDKHFFFWTFESRN--DPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNS-NATVIFLDQPVNVGFS 102 (421)
T ss_dssp TTEEEEEEEECCSS--CTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGG-GSEEECCCCSTTSTTC
T ss_pred CCcEEEEEEEEeCC--CCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCccccc-ccCEEEecCCCccccc
Confidence 47788887765432 335689999999999987765332110 111 357889995 588888
Q ss_pred CCCCC-CCCc-chHHHHHHHHHHHHh-cCC--C--CcEEEEEEcchHHHHHHHHhcC-----C--CccEEEEcCCccCH
Q 011425 108 DGDYV-SLGW-HEKDDLKVVVSYLRG-NKQ--T--SRIGLWGRSMGAVTSLLYGAED-----P--SIAGMVLDSAFSDL 172 (486)
Q Consensus 108 ~~~~~-~~~~-~~~~Dl~~~i~~l~~-~~~--~--~~i~LvGhSmGG~lAl~~A~~~-----p--~v~~lVl~sp~~~~ 172 (486)
-.... .... ..+.|+..++....+ ... . .+++|+|.|+||..+..+|..- . .++|+++.+|..+.
T Consensus 103 y~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~dp 181 (421)
T 1cpy_A 103 YSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp EESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCCCH
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcccCh
Confidence 53322 1111 225566665544333 222 2 5899999999999987776531 1 28999998877654
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.028 Score=53.65 Aligned_cols=39 Identities=26% Similarity=0.264 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~ 157 (486)
.+++...++.+.+..+..++++.||||||.+|..++...
T Consensus 120 ~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 120 VNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 355666677666665667999999999999999887664
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.046 Score=51.86 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc----CCC--ccEEEEcCCcc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE----DPS--IAGMVLDSAFS 170 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~----~p~--v~~lVl~sp~~ 170 (486)
+++...++.+.+..+..+|++.|||+||.+|..++.. .|. +..+...+|..
T Consensus 108 ~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 164 (258)
T 3g7n_A 108 DTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVALAQNFPDKSLVSNALNAFPI 164 (258)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSCEEEEEESCCCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHHHHHhCCCCceeEEEecCCCC
Confidence 3455556666566566799999999999999887764 343 54444444443
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=95.30 E-value=0.15 Score=46.15 Aligned_cols=87 Identities=9% Similarity=-0.048 Sum_probs=58.0
Q ss_pred HHHHhccCCeEEEEE--cCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC----
Q 011425 85 AAVILLPSNITLFTL--DFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP---- 158 (486)
Q Consensus 85 ~~~~L~~~Gy~Vv~~--D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p---- 158 (486)
+...+-...+.|..+ +||-.-.....+......-+.++...|.....+.+..+|+|+|+|+|+.++-.++...|
T Consensus 44 L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~ 123 (197)
T 3qpa_A 44 LESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIR 123 (197)
T ss_dssp HHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHH
T ss_pred HHHhcCCCceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHH
Confidence 333443345788888 78853211100100111226788888888888877799999999999999988776654
Q ss_pred -CccEEEEcCCccC
Q 011425 159 -SIAGMVLDSAFSD 171 (486)
Q Consensus 159 -~v~~lVl~sp~~~ 171 (486)
+|.++|+++-+..
T Consensus 124 ~~V~avvlfGdP~~ 137 (197)
T 3qpa_A 124 DKIAGTVLFGYTKN 137 (197)
T ss_dssp TTEEEEEEESCTTT
T ss_pred hheEEEEEeeCCcc
Confidence 3899999876654
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=95.10 E-value=0.033 Score=52.96 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC----CCccEEEEcCCcc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED----PSIAGMVLDSAFS 170 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~----p~v~~lVl~sp~~ 170 (486)
+++...++.+.+..+..+|++.||||||.+|..++... ..|..+...+|..
T Consensus 109 ~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~~~tFg~Prv 163 (261)
T 1uwc_A 109 DQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRS 163 (261)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeEEEEecCCCC
Confidence 45566666666666667999999999999999887753 2376555545544
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=94.90 E-value=0.053 Score=51.13 Aligned_cols=103 Identities=10% Similarity=0.051 Sum_probs=63.6
Q ss_pred CCcEEEEeCCCCCCh----hhHHHHHHHhccCCeEEEEE-cCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEE
Q 011425 65 PLPCVVYCHGNSGCR----ADANEAAVILLPSNITLFTL-DFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIG 139 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~----~~~~~~~~~L~~~Gy~Vv~~-D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 139 (486)
++|+||+.||.+... .....++..|..+ +.+--+ +|+-... .+......-+.++...++....+.+..+++
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~-~~~q~Vg~YpA~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~tkiV 77 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDI-YRWQPIGNYPAAAF---PMWPSVEKGVAELILQIELKLDADPYADFA 77 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTT-SEEEECCSCCCCSS---SCHHHHHHHHHHHHHHHHHHHHHCTTCCEE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHh-cCCCccccccCccc---CccchHHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 469999999997742 1245566666543 444444 3553321 000000011566666676666666678999
Q ss_pred EEEEcchHHHHHHHHhcC------------CCccEEEEcCCccC
Q 011425 140 LWGRSMGAVTSLLYGAED------------PSIAGMVLDSAFSD 171 (486)
Q Consensus 140 LvGhSmGG~lAl~~A~~~------------p~v~~lVl~sp~~~ 171 (486)
|.|+|+|+.++-.++... .+|.++|+++-+..
T Consensus 78 L~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 78 MAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp EEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred EEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 999999999998876541 12888888775543
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=94.66 E-value=0.24 Score=44.36 Aligned_cols=84 Identities=12% Similarity=0.022 Sum_probs=56.0
Q ss_pred HHHHhccCCeEEEEEc--CCCCCCCCCCCCCCC-c-chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-
Q 011425 85 AAVILLPSNITLFTLD--FSGSGLSDGDYVSLG-W-HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS- 159 (486)
Q Consensus 85 ~~~~L~~~Gy~Vv~~D--~rG~G~S~~~~~~~~-~-~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~- 159 (486)
+...+ .....|..++ |+-.-.. .+...+ . ..++++..++....++.+..+++|+|+|.|+.++-.++...|.
T Consensus 41 L~~~~-~~~v~v~~V~~~YpA~~~~--~~~~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~ 117 (187)
T 3qpd_A 41 LKLAR-SGDVACQGVGPRYTADLPS--NALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSAD 117 (187)
T ss_dssp HHHHS-TTCEEEEECCSSCCCCGGG--GGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHH
T ss_pred HHHHc-CCCceEEeeCCcccCcCcc--ccccccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHh
Confidence 33444 4457889998 8743210 111111 1 1256777777777777677899999999999999888766552
Q ss_pred ----ccEEEEcCCccC
Q 011425 160 ----IAGMVLDSAFSD 171 (486)
Q Consensus 160 ----v~~lVl~sp~~~ 171 (486)
|.++++++-+..
T Consensus 118 ~~~~V~avvlfGdP~~ 133 (187)
T 3qpd_A 118 VQDKIKGVVLFGYTRN 133 (187)
T ss_dssp HHHHEEEEEEESCTTT
T ss_pred hhhhEEEEEEeeCCcc
Confidence 899998876653
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=94.34 E-value=0.3 Score=44.22 Aligned_cols=85 Identities=12% Similarity=-0.038 Sum_probs=56.3
Q ss_pred HHhccCCeEEEEE--cCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC-----C
Q 011425 87 VILLPSNITLFTL--DFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-----S 159 (486)
Q Consensus 87 ~~L~~~Gy~Vv~~--D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p-----~ 159 (486)
..+-.....|..+ +|+-.-.....+......-+.++...|.....+.+..+|+|+|+|.|+.++-.++...| .
T Consensus 54 ~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~ 133 (201)
T 3dcn_A 54 RIYGANDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQ 133 (201)
T ss_dssp HHHCGGGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHH
T ss_pred HhcCCCceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhh
Confidence 3443345788888 68743211000000111226788888888888877799999999999999988877655 2
Q ss_pred ccEEEEcCCccC
Q 011425 160 IAGMVLDSAFSD 171 (486)
Q Consensus 160 v~~lVl~sp~~~ 171 (486)
|.++|+++-+..
T Consensus 134 V~avvlfGdP~~ 145 (201)
T 3dcn_A 134 IKGVVLFGYTKN 145 (201)
T ss_dssp EEEEEEETCTTT
T ss_pred eEEEEEeeCccc
Confidence 889998876554
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=94.15 E-value=0.05 Score=53.22 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC----CCccEEEEcCCccC
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED----PSIAGMVLDSAFSD 171 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~----p~v~~lVl~sp~~~ 171 (486)
+++...++.+.+..+..+|++.|||+||.+|..+|... ..+..+...+|...
T Consensus 120 ~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~l~~~~~~v~~~TFG~PrvG 175 (319)
T 3ngm_A 120 AAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGANLRIGGTPLDIYTYGSPRVG 175 (319)
T ss_dssp HHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEESCCCCE
T ss_pred HHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHHHHhcCCCceeeecCCCCcC
Confidence 45556666666666667999999999999998877642 23666665555543
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=93.74 E-value=0.36 Score=43.99 Aligned_cols=77 Identities=9% Similarity=0.045 Sum_probs=50.5
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCcc-----hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc-----------
Q 011425 93 NITLFTLDFSGSGLSDGDYVSLGWH-----EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE----------- 156 (486)
Q Consensus 93 Gy~Vv~~D~rG~G~S~~~~~~~~~~-----~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~----------- 156 (486)
|-.+..++||-...... .....|. -+.++...|.....+.+..+|+|+|||+|+.++-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~-~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~ 113 (207)
T 1qoz_A 35 GTTSEAIVYPACGGQAS-CGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNT 113 (207)
T ss_dssp TEEEEECCSCCCSSCGG-GTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCC
T ss_pred CCceEEeeccccccccc-cCCccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccCC
Confidence 45678889986421110 0011221 156777778777777777899999999999999887641
Q ss_pred ---CC-----CccEEEEcCCcc
Q 011425 157 ---DP-----SIAGMVLDSAFS 170 (486)
Q Consensus 157 ---~p-----~v~~lVl~sp~~ 170 (486)
.| .|.++++++-+.
T Consensus 114 ~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1qoz_A 114 AVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp SCCSCHHHHHHEEEEEEESCTT
T ss_pred CCCCChHHhccEEEEEEEcCCc
Confidence 12 278888877554
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=93.38 E-value=0.068 Score=51.29 Aligned_cols=37 Identities=30% Similarity=0.493 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
.++...++.+.+..+..+|.+.|||+||.+|..+|..
T Consensus 122 ~~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~ 158 (279)
T 3uue_A 122 DDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMD 158 (279)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHH
Confidence 3455555555555556799999999999999988754
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=93.37 E-value=0.43 Score=43.49 Aligned_cols=76 Identities=12% Similarity=0.084 Sum_probs=50.2
Q ss_pred CeEEEEEcCCCCC-CCCCCCCCCCc-----chHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc----------
Q 011425 93 NITLFTLDFSGSG-LSDGDYVSLGW-----HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE---------- 156 (486)
Q Consensus 93 Gy~Vv~~D~rG~G-~S~~~~~~~~~-----~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~---------- 156 (486)
|-.+..++||-.. .+. .....| .-+.++...|.....+.+..+|+|+|||.|+.++-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~--~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~ 112 (207)
T 1g66_A 35 GSTAEAINYPACGGQSS--CGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTN 112 (207)
T ss_dssp TCEEEECCCCCCSSCGG--GTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCceEEeeccccccccc--cCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhccccccccccc
Confidence 3467888998642 211 001112 1156777778777777777899999999999999887641
Q ss_pred ----CC-----CccEEEEcCCcc
Q 011425 157 ----DP-----SIAGMVLDSAFS 170 (486)
Q Consensus 157 ----~p-----~v~~lVl~sp~~ 170 (486)
.| .|.++++++-+.
T Consensus 113 ~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1g66_A 113 TAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCTT
T ss_pred CCCCCChhhhccEEEEEEEcCCC
Confidence 22 278888877554
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.76 Score=44.34 Aligned_cols=86 Identities=12% Similarity=0.068 Sum_probs=54.4
Q ss_pred HHHHhccCCeEEEEEcCCCCCCCCCC-CCCCCcc-----hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc--
Q 011425 85 AAVILLPSNITLFTLDFSGSGLSDGD-YVSLGWH-----EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE-- 156 (486)
Q Consensus 85 ~~~~L~~~Gy~Vv~~D~rG~G~S~~~-~~~~~~~-----~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~-- 156 (486)
+...+......++.++|+-.....-. .....|. -+.++...|....++....+|+|+|+|.|+.++-.++..
T Consensus 76 L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~ 155 (302)
T 3aja_A 76 LAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIG 155 (302)
T ss_dssp HHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhcc
Confidence 44445445678889999854221000 0011221 156677777777777667899999999999998877642
Q ss_pred -----CC-C-ccEEEEcCCcc
Q 011425 157 -----DP-S-IAGMVLDSAFS 170 (486)
Q Consensus 157 -----~p-~-v~~lVl~sp~~ 170 (486)
.+ + |.++|+++-+.
T Consensus 156 ~g~~~~~~~~V~aVvLfGdP~ 176 (302)
T 3aja_A 156 NGRGPVDEDLVLGVTLIADGR 176 (302)
T ss_dssp TTCSSSCGGGEEEEEEESCTT
T ss_pred CCCCCCChHHEEEEEEEeCCC
Confidence 12 2 89999877543
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=93.08 E-value=0.089 Score=51.04 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
++...++.+.+..+..++.+.|||+||.+|..+|..
T Consensus 139 ~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 139 QIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHH
Confidence 344455555555556799999999999999888765
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=92.83 E-value=0.21 Score=43.23 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=48.6
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHcC-----------------------CCcEEEEeCC-CCCCC--ChHHHHHHHHH
Q 011425 224 FIPALFGHASEDKFIRARHSDLIFNAYA-----------------------GDKNIIKFDG-DHNSS--RPQFYYDSVSI 277 (486)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~-----------------------~~~~l~~~~g-gH~~~--~p~~~~~~I~~ 277 (486)
.+++||.+|+.|.+|+.-..+...+.+. .+.+++.+.+ ||..+ .|+...+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 4799999999999999999999988875 1345556665 99976 79999999999
Q ss_pred HHHHh
Q 011425 278 FFYNV 282 (486)
Q Consensus 278 FL~~~ 282 (486)
||...
T Consensus 144 fl~~~ 148 (153)
T 1whs_B 144 FLQGK 148 (153)
T ss_dssp HHHTC
T ss_pred HHCCC
Confidence 99753
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=92.35 E-value=0.26 Score=48.16 Aligned_cols=58 Identities=12% Similarity=0.022 Sum_probs=41.4
Q ss_pred CCcEEEEEEEecCCCCCCCC-CcEEEEeCCCCCChh----hHHH---HHHHhccCCeEEEEEcCCC
Q 011425 46 RGHVLQCSHYMPSPFPEDTP-LPCVVYCHGNSGCRA----DANE---AAVILLPSNITLFTLDFSG 103 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~-~p~VV~lHG~gg~~~----~~~~---~~~~L~~~Gy~Vv~~D~rG 103 (486)
.+....+++|+|...+.+.+ .|+||++||.+++.. .|.. +.+.--++||.|+.++..+
T Consensus 200 ~~~~~~~~~yvP~~~~~~~~~~~l~v~lHGc~~~~~~~g~~~~~~~~~~~~Ad~~~~iv~yP~~~~ 265 (318)
T 2d81_A 200 NGMDTTGYLYVPQSCASGATVCSLHVALHGCLQSYSSIGSRFIQNTGYNKWADTNNMIILYPQAIP 265 (318)
T ss_dssp TTBCSEEEEEECHHHHSSSSCEEEEEEECCTTCSHHHHTTHHHHHSCHHHHHTTTTEEEEECCBCC
T ss_pred CCCCcceEEEecCCCCCCCCCCCEEEEecCCCCCcchhhhhhhcccChHHHHHhCCeEEEeCCCcC
Confidence 55667777999986544444 789999999999986 4433 2233344699999999864
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=90.75 E-value=0.33 Score=44.13 Aligned_cols=71 Identities=13% Similarity=0.039 Sum_probs=50.4
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC--CC-----ccEEEE
Q 011425 93 NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED--PS-----IAGMVL 165 (486)
Q Consensus 93 Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~--p~-----v~~lVl 165 (486)
|-....++|+-.- .+. ...-+.++...|+....+.+..+|+|+|+|.|+.++-.++... +. |.++|+
T Consensus 40 g~~~~~V~YpA~~----~y~--S~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvl 113 (205)
T 2czq_A 40 GGTIYNTVYTADF----SQN--SAAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFL 113 (205)
T ss_dssp SEEEEECCSCCCT----TCC--CHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEE
T ss_pred CCCceeecccccC----CCc--CHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEE
Confidence 4445777887422 111 2223788888888887777778999999999999988876554 42 889998
Q ss_pred cCCc
Q 011425 166 DSAF 169 (486)
Q Consensus 166 ~sp~ 169 (486)
++-+
T Consensus 114 fGdP 117 (205)
T 2czq_A 114 IGNP 117 (205)
T ss_dssp ESCT
T ss_pred EeCC
Confidence 7754
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=87.33 E-value=1.2 Score=38.27 Aligned_cols=59 Identities=12% Similarity=0.156 Sum_probs=45.8
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHcCC----------------------------CcEEEEeCC-CCCCC--ChHHH
Q 011425 223 TFIPALFGHASEDKFIRARHSDLIFNAYAG----------------------------DKNIIKFDG-DHNSS--RPQFY 271 (486)
Q Consensus 223 i~~PvLii~G~~D~~vp~~~~~~l~~~l~~----------------------------~~~l~~~~g-gH~~~--~p~~~ 271 (486)
-.+++||.+|..|.+++.-..+...+.+.- +.+++.+.+ ||..+ .|+..
T Consensus 62 ~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~a 141 (155)
T 4az3_B 62 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 141 (155)
T ss_dssp CCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHH
T ss_pred cCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHH
Confidence 357999999999999999999998888741 112344444 99977 78888
Q ss_pred HHHHHHHHHH
Q 011425 272 YDSVSIFFYN 281 (486)
Q Consensus 272 ~~~I~~FL~~ 281 (486)
.+.+.+||..
T Consensus 142 l~m~~~fl~g 151 (155)
T 4az3_B 142 FTMFSRFLNK 151 (155)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 8888889864
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=85.83 E-value=0.61 Score=45.99 Aligned_cols=22 Identities=23% Similarity=0.182 Sum_probs=19.0
Q ss_pred CCcEEEEEEcchHHHHHHHHhc
Q 011425 135 TSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 135 ~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
..+|++.|||+||.+|..+|..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 4689999999999999887764
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=82.02 E-value=0.31 Score=49.19 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcC
Q 011425 122 LKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAED 157 (486)
Q Consensus 122 l~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~ 157 (486)
+...|..+.+.++. .+|.+.|||+||.+|..+|...
T Consensus 212 Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 212 VLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 44444444444332 4799999999999999887653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 486 | ||||
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 5e-16 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 2e-13 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 3e-13 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 2e-08 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 5e-06 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 5e-06 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 8e-06 | |
| d1ju3a2 | 347 | c.69.1.21 (A:5-351) Bacterial cocaine esterase N-t | 1e-05 | |
| d2b9va2 | 385 | c.69.1.21 (A:50-434) Alpha-amino acid ester hydrol | 2e-05 | |
| d2i3da1 | 218 | c.69.1.36 (A:2-219) Hypothetical protein Atu1826 { | 0.001 |
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 76.5 bits (187), Expect = 5e-16
Identities = 33/239 (13%), Positives = 67/239 (28%), Gaps = 12/239 (5%)
Query: 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNIT 95
K +R G L P ++ G + A L +
Sbjct: 3 KTIAHVLRVNNGQELHVWETPPKE-NVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFH 61
Query: 96 LFTLDFSGS-GLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154
+F D GLS G + V + K T IGL S+ A +
Sbjct: 62 VFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEV- 120
Query: 155 AEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDL 214
D ++ ++ +L D + + + + LP + + + + +
Sbjct: 121 ISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFE 180
Query: 215 NC-------LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKF--DGDHN 264
+ L T +P + A+ D +++ + + H+
Sbjct: 181 HHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHD 239
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 69.2 bits (168), Expect = 2e-13
Identities = 45/266 (16%), Positives = 83/266 (31%), Gaps = 14/266 (5%)
Query: 22 YLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD 81
+ + E + Y+ P P P V+ G + +
Sbjct: 88 QARKVELYQKAAPLLSPPAERHELVVDGIPMPVYVRIP-EGPGPHPAVIMLGGLESTKEE 146
Query: 82 ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSY-LRGNKQTSRIGL 140
+ + ++L + T D G G G +EK VV + IG+
Sbjct: 147 SFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGV 206
Query: 141 WGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMR 200
GRS+G +L A +P +A + FSDL D + + P
Sbjct: 207 LGRSLGGNYALKSAACEPRLAACISWGGFSDL--------DYWDLETPLTKESWKYVSKV 258
Query: 201 RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKN--IIK 258
+++ L + + P H D+ + D + + +++
Sbjct: 259 DTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVE 317
Query: 259 FDGDHNSS-RPQFYYDSVSIFFYNVL 283
DGDH ++ + Y+VL
Sbjct: 318 KDGDHCCHNLGIRPRLEMADWLYDVL 343
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 68.3 bits (165), Expect = 3e-13
Identities = 43/291 (14%), Positives = 81/291 (27%), Gaps = 30/291 (10%)
Query: 15 AEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHG 74
A+ + L D+ G K L ++ + + +P ++ P P +V HG
Sbjct: 36 AKVQAEPDLQPVDYPADG--VKVYRLTYKSFGNARITGWYAVP---DKEGPHPAIVKYHG 90
Query: 75 NSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVS------- 127
+ V F + G S+ +S H + +
Sbjct: 91 YNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYY 150
Query: 128 --------------YLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLF 173
+RIG+ G S G ++ A V D + F
Sbjct: 151 RGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNF 210
Query: 174 DLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHAS 233
+ +++ + V K +N A + +P L
Sbjct: 211 ERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNL---ADRVKVPVLMSIGL 267
Query: 234 EDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVLH 284
DK +N K + + + P F + ++ FF +L
Sbjct: 268 IDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLA-FFKQILK 317
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 53.9 bits (128), Expect = 2e-08
Identities = 50/274 (18%), Positives = 80/274 (29%), Gaps = 36/274 (13%)
Query: 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLF 97
D+ RG ++ +P E LPCVV G +G R ++ F
Sbjct: 56 YDVTFSGYRGQRIKGWLLVPKLEEE--KLPCVVQYIGYNGGRGFPHDWLF-WPSMGYICF 112
Query: 98 TLDFSGSGLSDGDYVSLGWHEK--------------------------DDLKVVVSYLRG 131
+D G G + + E D V
Sbjct: 113 VMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAAS 172
Query: 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPK 189
Q RI + G S G +L A ++ D F F ++LVD +
Sbjct: 173 FPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHP----- 227
Query: 190 FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249
+ R ++ + + + A + IPALF D +N
Sbjct: 228 YAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNY 287
Query: 250 YAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVL 283
YAG K I + +++ F F +
Sbjct: 288 YAGPKEIRIYPYNNHEGGGSFQAVEQVKFLKKLF 321
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 45.5 bits (106), Expect = 5e-06
Identities = 31/221 (14%), Positives = 52/221 (23%), Gaps = 35/221 (15%)
Query: 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTL 99
+ +R R + S P + P ++ HG G + L
Sbjct: 1 MRVRTERLTLAGLSVLARIP---EAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAF 57
Query: 100 DFSGSGLSDGDYVSLGWHEKDDLKVVVSY-----------LRGNKQTSRIGLWGRSMGAV 148
D G +G S + V+ + + L G S+GA
Sbjct: 58 DAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAF 117
Query: 149 TSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK 208
+ L AE G++ L + V
Sbjct: 118 VAHLLLAEGFRPRGVLAFIGSGFPMKLP---------------------QGQVVEDPGVL 156
Query: 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249
+ +P L H S D + + A
Sbjct: 157 ALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEA 197
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 46.5 bits (109), Expect = 5e-06
Identities = 19/190 (10%), Positives = 46/190 (24%), Gaps = 22/190 (11%)
Query: 9 VIRPPRAEYNPDQYLW---ERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTP 65
+IRP E P D+ + + P
Sbjct: 47 IIRPKSTEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAK 106
Query: 66 LPCVVYCHGNSGCRADANEAAVI--LLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123
+ ++ L + G+ SDG S + + +
Sbjct: 107 AKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMT 166
Query: 124 VVVSYLRGNKQ----------------TSRIGLWGRSMGAVTSLLYGAED-PSIAGMVLD 166
V+ +L G + ++ + G+S + + ++ +
Sbjct: 167 AVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAE 226
Query: 167 SAFSDLFDLM 176
+ S ++
Sbjct: 227 AGISSWYNYY 236
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 44.9 bits (104), Expect = 8e-06
Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 13/236 (5%)
Query: 57 PSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW 116
P PF + V+ HG +G AD L T + G G+ + V G
Sbjct: 2 PKPFFFEAGERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGP 61
Query: 117 HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP------SIAGMVLDSAFS 170
+ + NK +I + G S+G V SL G P A M + S +
Sbjct: 62 DDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEET 121
Query: 171 DLFDLMLELVDVYKI--RLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPAL 228
++ + K + + + ++ + ++ + + + P
Sbjct: 122 MYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTF 181
Query: 229 FGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDGD----HNSSRPQFYYDSVSIFF 279
A D+ I +++I+N K I ++ ++ + F
Sbjct: 182 VVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFL 237
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 9/147 (6%)
Query: 34 SYK-RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHG----NSGCRADANEAAVI 88
+Y ++ + G L Y P D P+P ++ + + + + +
Sbjct: 1 NYSVASNVMVPMRDGVRLAVDLYRP---DADGPVPVLLVRNPYDKFDVFAWSTQSTNWLE 57
Query: 89 LLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAV 148
+ + D G S+G++V E D + L +G++G S V
Sbjct: 58 FVRDGYAVVIQDTRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGV 117
Query: 149 TSLLYGAEDPS-IAGMVLDSAFSDLFD 174
T + + A +DL+
Sbjct: 118 TQWQAAVSGVGGLKAIAPSMASADLYR 144
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} Length = 385 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Score = 44.3 bits (103), Expect = 2e-05
Identities = 30/187 (16%), Positives = 50/187 (26%), Gaps = 28/187 (14%)
Query: 12 PPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVY 71
P + D R Y ++++ + G L +P P ++
Sbjct: 3 PLSVQTGSDIPASVHMPTDQQRDYIKREVMVPMRDGVKLYTVIVIP---KNARNAPILLT 59
Query: 72 CHG------------NSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW--- 116
R + + + D G S GDYV
Sbjct: 60 RTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHG 119
Query: 117 -------HEKDDLKVVVSYLRGNKQTS--RIGLWGRSMGAVTS-LLYGAEDPSIAGMVLD 166
E D V +L N S R+G+ G S T + P++ +
Sbjct: 120 PLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPE 179
Query: 167 SAFSDLF 173
S D +
Sbjct: 180 SPMVDGW 186
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 38.3 bits (88), Expect = 0.001
Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%)
Query: 55 YMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP-----SNITLFTLDFSGSGLSDG 109
Y P ++ P + H + N V L T +F G S G
Sbjct: 16 YQP---SKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQG 72
Query: 110 DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169
++ D + + + + G S GA + P I G + +
Sbjct: 73 EFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAPQ 132
Query: 170 SDLFD 174
+ +D
Sbjct: 133 PNTYD 137
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 486 | |||
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.95 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.94 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.94 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.94 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.93 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.93 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.93 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.93 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.93 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.93 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.93 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.93 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.92 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.92 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.92 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.92 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.92 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.92 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.92 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.92 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.92 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.91 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.91 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.91 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.91 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.91 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.9 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.9 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.89 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.89 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.89 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.88 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.87 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.86 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.86 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.85 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.84 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.84 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.84 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.82 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.82 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.81 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.79 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.76 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.76 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.75 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.74 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.74 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.73 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.73 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.72 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.69 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.69 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.69 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.67 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.65 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.64 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.63 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.63 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.63 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.61 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.58 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.57 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.55 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.54 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.52 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.51 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.45 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.4 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.39 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.36 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.34 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.32 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.27 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.23 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.17 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.15 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.11 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.54 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.53 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.42 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.27 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.26 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.22 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.17 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.13 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.12 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.07 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.05 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.05 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.04 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.01 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.94 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 97.83 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.81 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.75 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.73 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.71 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 95.29 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 95.13 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 94.84 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 94.29 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 94.2 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 93.76 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 89.76 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 86.35 |
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.95 E-value=5.4e-27 Score=230.14 Aligned_cols=225 Identities=17% Similarity=0.167 Sum_probs=163.0
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC-CCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSL 114 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~-G~S~~~~~~~ 114 (486)
+..+..++..||..|+++.+.|... .+.++++||++||++++...|..+++.|+++||+|+++|+||| |.|++.....
T Consensus 3 ~~~~h~~~~~dg~~l~~w~~~p~~~-~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~ 81 (302)
T d1thta_ 3 KTIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEF 81 (302)
T ss_dssp SCEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CC
T ss_pred eeeeeEEEcCCCCEEEEEEecCcCC-CCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCC
Confidence 4567788999999999999998752 3356789999999999999999999999999999999999998 8998876666
Q ss_pred Ccc-hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchh--
Q 011425 115 GWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT-- 191 (486)
Q Consensus 115 ~~~-~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~-- 191 (486)
.+. ...|+.++++|+... +.++++|+||||||.+++.+|.. ++++++|+.+|+..+...............+...
T Consensus 82 ~~~~~~~dl~~vi~~l~~~-~~~~i~lvG~SmGG~ial~~A~~-~~v~~li~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (302)
T d1thta_ 82 TMTTGKNSLCTVYHWLQTK-GTQNIGLIAASLSARVAYEVISD-LELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELP 159 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHT-TCCCEEEEEETHHHHHHHHHTTT-SCCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGGCC
T ss_pred CHHHHHHHHHHHHHhhhcc-CCceeEEEEEchHHHHHHHHhcc-cccceeEeecccccHHHHHHHHHhhccchhhhhhcc
Confidence 543 378999999999876 56799999999999999988864 4499999999998876655443322111111000
Q ss_pred --------HHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-CCcEEEEeCC-
Q 011425 192 --------VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG- 261 (486)
Q Consensus 192 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~l~~~~g- 261 (486)
......+....+.... . ........+.++++|+|+++|++|.+||++.+..+++.++ +.+++++++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~ 236 (302)
T d1thta_ 160 NDLDFEGHKLGSEVFVRDCFEHHW--D-TLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGS 236 (302)
T ss_dssp SEEEETTEEEEHHHHHHHHHHTTC--S-SHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTC
T ss_pred ccccccccchhhHHHHHHHHHhHH--H-HHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCC
Confidence 0000111111111110 0 0012345677899999999999999999999999999987 4689999998
Q ss_pred CCCCC
Q 011425 262 DHNSS 266 (486)
Q Consensus 262 gH~~~ 266 (486)
+|...
T Consensus 237 ~H~l~ 241 (302)
T d1thta_ 237 SHDLG 241 (302)
T ss_dssp CSCTT
T ss_pred Ccccc
Confidence 99876
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=7.5e-26 Score=220.48 Aligned_cols=242 Identities=16% Similarity=0.152 Sum_probs=177.3
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
++.++|+|.+.||..|.++++.|.+ .++.|+||++||++++...|...+..|+++||.|+++|+||+|.|.+.....
T Consensus 54 ~~~~~v~~~~~dg~~i~~~l~~P~~---~~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~ 130 (318)
T d1l7aa_ 54 VKVYRLTYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISP 130 (318)
T ss_dssp EEEEEEEEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCS
T ss_pred eEEEEEEEECCCCcEEEEEEEecCC---CCCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccc
Confidence 4557899999999999999999973 4678999999999999999999999999999999999999999998654322
Q ss_pred Cc-------------------chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHH
Q 011425 115 GW-------------------HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLF 173 (486)
Q Consensus 115 ~~-------------------~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~ 173 (486)
.. ..+.|...+++++..+... .+++++|+|+||..++.++...+++.+++...+.....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (318)
T d1l7aa_ 131 HGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNF 210 (318)
T ss_dssp SCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSCCSEEEEESCCSCCH
T ss_pred hhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcccceEEEeccccccH
Confidence 10 0146777888888887654 57999999999999999999999998888877765433
Q ss_pred HHHHHHHHHHhhhCCchhHHHHHHHHHHHH-hhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC
Q 011425 174 DLMLELVDVYKIRLPKFTVKMAVQYMRRVI-QKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG 252 (486)
Q Consensus 174 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~ 252 (486)
........ ..+............... ...........+....+.++++|+|+++|++|.+||++.+..++++++.
T Consensus 211 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~ 286 (318)
T d1l7aa_ 211 ERAIDVAL----EQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET 286 (318)
T ss_dssp HHHHHHCC----STTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS
T ss_pred HHHhhccc----ccccchhhhhhhccccccccccccccccccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCC
Confidence 22211100 001000000000000000 0000000112234456778999999999999999999999999999988
Q ss_pred CcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcCC
Q 011425 253 DKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 253 ~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~~ 285 (486)
+++++++++ ||... +++.+.+.+||+++|++
T Consensus 287 ~~~l~~~~~~gH~~~--~~~~~~~~~fl~~~LkG 318 (318)
T d1l7aa_ 287 KKELKVYRYFGHEYI--PAFQTEKLAFFKQILKG 318 (318)
T ss_dssp SEEEEEETTCCSSCC--HHHHHHHHHHHHHHHCC
T ss_pred CcEEEEECCCCCCCc--HHHHHHHHHHHHHhCCC
Confidence 889999987 99754 67889999999999864
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.94 E-value=2.2e-26 Score=231.28 Aligned_cols=237 Identities=19% Similarity=0.183 Sum_probs=170.5
Q ss_pred ccCcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCC
Q 011425 30 LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 30 ~~~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
+.+.++ +.++++. +|..|.++++.|. +.++.|+||++||+++....+..++..|+++||+|+++|+||+|.|.+
T Consensus 101 ~~~~~~--e~v~ip~-dg~~l~g~l~~P~---~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~ 174 (360)
T d2jbwa1 101 LLSPPA--ERHELVV-DGIPMPVYVRIPE---GPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFE 174 (360)
T ss_dssp GSSSCE--EEEEEEE-TTEEEEEEEECCS---SSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTT
T ss_pred hCCCCe--EEeecCc-CCcccceEEEecC---CCCCceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCc
Confidence 445555 4555553 7999999999996 446789999999999998888889999999999999999999999976
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHH---HHHHHHHh
Q 011425 110 DYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLM---LELVDVYK 184 (486)
Q Consensus 110 ~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~---~~~~~~~~ 184 (486)
...... ....++..+++++...... ++|+|+||||||++++.+|+..|+|+++|.++++.++.... ......+.
T Consensus 175 ~~~~~~-~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pri~a~V~~~~~~~~~~~~~~~~~~~~~~~ 253 (360)
T d2jbwa1 175 YKRIAG-DYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDYWDLETPLTKESWK 253 (360)
T ss_dssp TCCSCS-CHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCSCSTTGGGSCHHHHHHHH
T ss_pred cccccc-cHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCCCcceEEEEcccccHHHHhhhhhhhhHHHH
Confidence 543322 2245677888999887554 68999999999999999999999999999999876532100 00000000
Q ss_pred hhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-CcEEEEeCC-C
Q 011425 185 IRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDG-D 262 (486)
Q Consensus 185 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~l~~~~g-g 262 (486)
............... . ...+....+.+|++|+|++||++|. ||++.+..+++.++. ..+++++++ +
T Consensus 254 ~~~~~~~~~~~~~~~------~-----~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~ 321 (360)
T d2jbwa1 254 YVSKVDTLEEARLHV------H-----AALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGD 321 (360)
T ss_dssp HHTTCSSHHHHHHHH------H-----HHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCC
T ss_pred HhccCCchHHHHHHH------H-----hhcchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCC
Confidence 000000000000000 0 0112334567899999999999998 699999999999874 456777776 8
Q ss_pred CCCC-ChHHHHHHHHHHHHHhcCC
Q 011425 263 HNSS-RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 263 H~~~-~p~~~~~~I~~FL~~~l~~ 285 (486)
|... .+..+...|.+||.+.|..
T Consensus 322 H~~~~~~~~~~~~i~dWl~~~L~~ 345 (360)
T d2jbwa1 322 HCCHNLGIRPRLEMADWLYDVLVA 345 (360)
T ss_dssp GGGGGGTTHHHHHHHHHHHHHHTS
T ss_pred cCCCcChHHHHHHHHHHHHHHhcc
Confidence 8654 5678888999999999854
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.94 E-value=1.3e-25 Score=216.16 Aligned_cols=231 Identities=13% Similarity=0.073 Sum_probs=157.1
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH-HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL 122 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~-~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl 122 (486)
..+|.+|+|..+ +++..|+|||+||++++...|. .++..|+++||.|+++|+||||.|+........+..+++
T Consensus 6 ~~g~~~i~y~~~------G~~~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 79 (297)
T d1q0ra_ 6 PSGDVELWSDDF------GDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGEL 79 (297)
T ss_dssp EETTEEEEEEEE------SCTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHH
T ss_pred EECCEEEEEEEe------cCCCCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchh
Confidence 357789999888 4456799999999999988874 577889999999999999999999754333221234555
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHH-------------------
Q 011425 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV------------------- 182 (486)
Q Consensus 123 ~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~------------------- 182 (486)
...+..+.+..+.++++++||||||.+++.+|..+|+ |+++|++++..............
T Consensus 80 ~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (297)
T d1q0ra_ 80 AADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLD 159 (297)
T ss_dssp HHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHH
T ss_pred hhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhhHHHHH
Confidence 5555555555578899999999999999999999998 99999987654321100000000
Q ss_pred --Hhh-hCCchh----------------------HHHHHHHHHHHHhhhhcc----------cccccchhhhCCCCCCCE
Q 011425 183 --YKI-RLPKFT----------------------VKMAVQYMRRVIQKKAKF----------DIMDLNCLKLAPKTFIPA 227 (486)
Q Consensus 183 --~~~-~~p~~~----------------------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~i~~Pv 227 (486)
... ...... ......+........... .....+....+.+|++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 239 (297)
T d1q0ra_ 160 ALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPT 239 (297)
T ss_dssp HHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSCE
T ss_pred HHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhhhhccCCce
Confidence 000 000000 000011111111110000 011123445677899999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 228 LFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 228 Lii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
++|+|++|.++|+..++.+.+.++ +.+++++++ ||+.. .|+++.+.|.+||++
T Consensus 240 lvi~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 240 LVIQAEHDPIAPAPHGKHLAGLIP-TARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp EEEEETTCSSSCTTHHHHHHHTST-TEEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCC-CCEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 999999999999999999988885 467888987 99977 688999999999875
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.93 E-value=1.6e-25 Score=212.35 Aligned_cols=227 Identities=15% Similarity=0.150 Sum_probs=147.9
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KD 120 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~ 120 (486)
+++.||.+|+|..+ +..|+|||+||++++...|..++..|+++||+|+++|+||||.|+.......+.. ++
T Consensus 3 ~~t~dG~~l~y~~~--------G~g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (274)
T d1a8qa_ 3 CTTRDGVEIFYKDW--------GQGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFAD 74 (274)
T ss_dssp EECTTSCEEEEEEE--------CSSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EECcCCCEEEEEEE--------CCCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHH
Confidence 67889999998876 3457899999999999999999999999999999999999999987654444322 34
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCH------------HHHHHHHHH-----
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDL------------FDLMLELVD----- 181 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~------------~~~~~~~~~----- 181 (486)
|+.++++ ....++++++||||||.+++.+++.+ |+ |++++++++.... .........
T Consensus 75 dl~~~l~----~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (274)
T d1a8qa_ 75 DLNDLLT----DLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTE 150 (274)
T ss_dssp HHHHHHH----HTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHH----HhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhh
Confidence 4444443 33678999999999999998876654 66 9999998753310 000000000
Q ss_pred ----------HH-hhhCCc--hhHHHHHHHHHHHHhhh------hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH
Q 011425 182 ----------VY-KIRLPK--FTVKMAVQYMRRVIQKK------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (486)
Q Consensus 182 ----------~~-~~~~p~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (486)
.+ ....+. ........+........ ........+....+.++++|+|+|+|++|.+++++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~ 230 (274)
T d1a8qa_ 151 RSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDA 230 (274)
T ss_dssp HHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGG
T ss_pred hHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeeccCCCCCcCHHH
Confidence 00 000000 00000000000000000 000001123345677899999999999999999876
Q ss_pred H-HHHHHHcCCCcEEEEeCC-CCCCC----ChHHHHHHHHHHHHH
Q 011425 243 S-DLIFNAYAGDKNIIKFDG-DHNSS----RPQFYYDSVSIFFYN 281 (486)
Q Consensus 243 ~-~~l~~~l~~~~~l~~~~g-gH~~~----~p~~~~~~I~~FL~~ 281 (486)
. +.+.+.++ +.+++++++ ||+.. .|+++.+.|.+||++
T Consensus 231 ~~~~~~~~~~-~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 231 TGRKSAQIIP-NAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp THHHHHHHST-TCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCC-CCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 5 45555554 467888887 99753 478999999999864
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.93 E-value=8.7e-25 Score=203.67 Aligned_cols=204 Identities=18% Similarity=0.185 Sum_probs=162.9
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCC---CCChh--hHHHHHHHhccCCeEEEEEcCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGN---SGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~---gg~~~--~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
-+.+.+++..++| +|.+.+..|... ...+.+++|++|+. |++.. .+..+++.|+++||.|+.+|+||+|.|.+
T Consensus 6 ~~~~~l~i~gp~G-~l~~~~~~p~~~-~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g 83 (218)
T d2fuka1 6 TESAALTLDGPVG-PLDVAVDLPEPD-VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAG 83 (218)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTT-SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred CCceEEEEeCCCc-cEEEEEEcCCCC-CCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCC
Confidence 3456788999998 688888888642 23345677899844 34333 35668899999999999999999999998
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCc
Q 011425 110 DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPK 189 (486)
Q Consensus 110 ~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~ 189 (486)
...... ..++|+.++++|+.++....+++++||||||.+++.+|... .++++|+++|+...
T Consensus 84 ~~~~~~-~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~-~~~~lil~ap~~~~----------------- 144 (218)
T d2fuka1 84 SFDHGD-GEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL-EPQVLISIAPPAGR----------------- 144 (218)
T ss_dssp CCCTTT-HHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH-CCSEEEEESCCBTT-----------------
T ss_pred ccCcCc-chHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc-ccceEEEeCCcccc-----------------
Confidence 755432 44899999999999988789999999999999999888764 48999999987541
Q ss_pred hhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-C
Q 011425 190 FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-R 267 (486)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-~ 267 (486)
++. ....+.+|+|+|||++|.++|++.+.++++.+...+++++++| +|++. .
T Consensus 145 -------------------~~~-------~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~~~ 198 (218)
T d2fuka1 145 -------------------WDF-------SDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHRK 198 (218)
T ss_dssp -------------------BCC-------TTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTTC
T ss_pred -------------------hhh-------hccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCCCC
Confidence 000 1124568999999999999999999999998888889999998 99887 4
Q ss_pred hHHHHHHHHHHHHHhcCC
Q 011425 268 PQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 268 p~~~~~~I~~FL~~~l~~ 285 (486)
.+++.+.+.+|+.+++..
T Consensus 199 ~~~l~~~~~~~v~~~l~~ 216 (218)
T d2fuka1 199 LIDLRGALQHGVRRWLPA 216 (218)
T ss_dssp HHHHHHHHHHHHGGGCSS
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 567889999999999864
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.93 E-value=2e-24 Score=204.78 Aligned_cols=228 Identities=16% Similarity=0.138 Sum_probs=145.4
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-H
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-K 119 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~ 119 (486)
.-.+.++.+|+|..+ +..|+|||+||++++...|..++..|+++||+|+++|+||||.|+.......+.. +
T Consensus 6 ~~~~~~~v~i~y~~~--------G~G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 77 (277)
T d1brta_ 6 GQENSTSIDLYYEDH--------GTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFA 77 (277)
T ss_dssp EEETTEEEEEEEEEE--------CSSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHH
T ss_pred ecCcCCcEEEEEEEE--------ccCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhh
Confidence 333444455655544 3568899999999999999999999999999999999999999986554444322 4
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchH-HHHHHHHhcCCC-ccEEEEcCCccCH-------------HHHHHHHHHHHh
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGA-VTSLLYGAEDPS-IAGMVLDSAFSDL-------------FDLMLELVDVYK 184 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG-~lAl~~A~~~p~-v~~lVl~sp~~~~-------------~~~~~~~~~~~~ 184 (486)
+|+.++++.+ +.++++|+|||||| .++..++..+|+ |+++|++++.... ............
T Consensus 78 ~dl~~~l~~l----~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (277)
T d1brta_ 78 ADLNTVLETL----DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVK 153 (277)
T ss_dssp HHHHHHHHHH----TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHH
T ss_pred hhhhhhhhcc----CcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhh
Confidence 5555555554 67899999999996 556666777787 9999998764310 001111000000
Q ss_pred ------------hh-------CCchhHHHHHHHHHHH-----HhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 185 ------------IR-------LPKFTVKMAVQYMRRV-----IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 185 ------------~~-------~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
.. ................ ............+....+.++++|+++++|+.|.++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~ 233 (277)
T d1brta_ 154 ADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPI 233 (277)
T ss_dssp HCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCG
T ss_pred ccchhhhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCH
Confidence 00 0000000111111100 00000001111133445677899999999999999998
Q ss_pred HHHHH-HHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 241 RHSDL-IFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 241 ~~~~~-l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+...+ +.+.+ ++.+++++++ ||+.. .|+++.+.|.+||++
T Consensus 234 ~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 234 ENTARVFHKAL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp GGTHHHHHHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 76544 55555 4567888887 99866 799999999999974
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.93 E-value=3.1e-25 Score=212.08 Aligned_cols=235 Identities=12% Similarity=0.062 Sum_probs=174.4
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCC--CCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC--
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGN--SGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD-- 110 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~--gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~-- 110 (486)
...+.|+|.+.||.+|.+++|.|.. ..++.|+||++||+ +.....|..++..|+++||.|+++|+||+|.+...
T Consensus 10 ~~~~~v~~~s~dG~~i~~~l~~p~~--~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~ 87 (260)
T d2hu7a2 10 AGSRLVWVESFDGSRVPTYVLESGR--APTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWR 87 (260)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETT--SCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHH
T ss_pred CceEEEEEECCCCCEEEEEEEeCCC--CCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccc
Confidence 3457789999999999999999975 34577999999984 33445566778889999999999999999876532
Q ss_pred ---CCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhh
Q 011425 111 ---YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIR 186 (486)
Q Consensus 111 ---~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~ 186 (486)
.......+++|+.++++|+.++....++.++|+|+||.+++.++..+|+ +++++..+|..+..........
T Consensus 88 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~----- 162 (260)
T d2hu7a2 88 LKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDA----- 162 (260)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHHHTCCH-----
T ss_pred cccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhhhhccccc-----
Confidence 1122223478999999999998766899999999999999999999998 8999999998876543221000
Q ss_pred CCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-C
Q 011425 187 LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-D 262 (486)
Q Consensus 187 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-g 262 (486)
. ...+........ .......++...+.++++|+|++||+.|.+||++++..+++.+. ...+++++++ +
T Consensus 163 ---~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~ 234 (260)
T d2hu7a2 163 ---A----FRNFIEQLTGGS-REIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAG 234 (260)
T ss_dssp ---H----HHHHHHHHHCSC-HHHHHHTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred ---c----cccccccccccc-cccccccchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCC
Confidence 0 001111110000 00111224556677889999999999999999999999998763 4678999998 9
Q ss_pred CCCCC---hHHHHHHHHHHHHHhcC
Q 011425 263 HNSSR---PQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 263 H~~~~---p~~~~~~I~~FL~~~l~ 284 (486)
|.... ...+++.+.+||.++++
T Consensus 235 H~~~~~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 235 HAINTMEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp SSCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChHhHHHHHHHHHHHHHHHhc
Confidence 98763 44777888999999874
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.93 E-value=3.1e-25 Score=210.87 Aligned_cols=232 Identities=17% Similarity=0.180 Sum_probs=153.3
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC-CCCcc-hH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWH-EK 119 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~-~~~~~-~~ 119 (486)
|...||.+|+|..+-. +..+|+||++||++++...|...+..++++||.|+++|+||||.|+.... ..... .+
T Consensus 6 ~~~~~g~~i~y~~~g~-----~~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 80 (290)
T d1mtza_ 6 YAKVNGIYIYYKLCKA-----PEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGV 80 (290)
T ss_dssp EEEETTEEEEEEEECC-----SSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHH
T ss_pred eEEECCEEEEEEEcCC-----CCCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchh
Confidence 3446999999887732 23568999999998888888777778888899999999999999975322 22221 14
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHH--------------h
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVY--------------K 184 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~--------------~ 184 (486)
+|+.++++.+. +.++++|+||||||.+++.+|.++|+ |+++|++++............... .
T Consensus 81 ~~l~~ll~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (290)
T d1mtza_ 81 EEAEALRSKLF---GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYG 157 (290)
T ss_dssp HHHHHHHHHHH---TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhhhhhhcccc---cccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHHHHHhh
Confidence 55555555442 45799999999999999999999998 999999988765432211110000 0
Q ss_pred hh--CCchhHHHH-HHHHH------------------HHHh-----hh---hcc----cccccchhhhCCCCCCCEEEEE
Q 011425 185 IR--LPKFTVKMA-VQYMR------------------RVIQ-----KK---AKF----DIMDLNCLKLAPKTFIPALFGH 231 (486)
Q Consensus 185 ~~--~p~~~~~~~-~~~~~------------------~~~~-----~~---~~~----~~~~~~~~~~l~~i~~PvLii~ 231 (486)
.. ......... ..... .... .. ..+ .....+....+..+++|+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 237 (290)
T d1mtza_ 158 SSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITV 237 (290)
T ss_dssp HHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEE
T ss_pred hhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEEEE
Confidence 00 000000000 00000 0000 00 000 0111233445667899999999
Q ss_pred eCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 232 ASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 232 G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
|++|.++| ..+..+.+.+++ .+++++++ ||+.. .|+++.+.|.+||.+++
T Consensus 238 G~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h~ 290 (290)
T d1mtza_ 238 GEYDEVTP-NVARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFILKHL 290 (290)
T ss_dssp ETTCSSCH-HHHHHHHHHSTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTCC
T ss_pred eCCCCCCH-HHHHHHHHHCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHHHhC
Confidence 99998765 667888888765 57888876 99866 79999999999999874
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=1.6e-24 Score=205.23 Aligned_cols=228 Identities=15% Similarity=0.073 Sum_probs=153.7
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH---HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN---EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~---~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~ 118 (486)
+.+.+|.+++|..+ +.+|+|||+||++++...+. .++..|. .||.|+++|+||||.|....... ..
T Consensus 7 ~i~~~G~~~~Y~~~--------G~G~pvvllHG~~~~~~~~~~~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~~~~~--~~ 75 (271)
T d1uk8a_ 7 SILAAGVLTNYHDV--------GEGQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENYN--YS 75 (271)
T ss_dssp EEEETTEEEEEEEE--------CCSSEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTCC--CC
T ss_pred EEEECCEEEEEEEE--------eeCCeEEEECCCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCCCCCcccccccc--cc
Confidence 34569999998776 34578999999987765544 4566665 48999999999999998644322 22
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH----------------HHHHHHH
Q 011425 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----------------LMLELVD 181 (486)
Q Consensus 119 ~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~----------------~~~~~~~ 181 (486)
.++....+..+.+..+.++++|+||||||.+++.+|.++|. +.++|+.++...... .......
T Consensus 76 ~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T d1uk8a_ 76 KDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLD 155 (271)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHH
T ss_pred ccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccchhHHHHHHHH
Confidence 56667777777777688999999999999999999999998 999999876542110 0111111
Q ss_pred HHhhhCCchhHHHHHHHHHHH--------Hhhhhccc-----ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHH
Q 011425 182 VYKIRLPKFTVKMAVQYMRRV--------IQKKAKFD-----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFN 248 (486)
Q Consensus 182 ~~~~~~p~~~~~~~~~~~~~~--------~~~~~~~~-----~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~ 248 (486)
.+................... +....... .........+.++++|+|+|+|++|.++|++.+..+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 235 (271)
T d1uk8a_ 156 IFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGE 235 (271)
T ss_dssp HHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred HHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHH
Confidence 111000000000000000000 00000000 00112234567899999999999999999999999999
Q ss_pred HcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 249 AYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 249 ~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
.+++ .+++++++ ||+.+ .|+++.+.|.+||++
T Consensus 236 ~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 236 LIDR-AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp HCTT-EEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred hCCC-CEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 8865 67888887 99866 899999999999986
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.93 E-value=5.3e-25 Score=208.51 Aligned_cols=229 Identities=15% Similarity=0.202 Sum_probs=151.3
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-H
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-K 119 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~ 119 (486)
++++.||.+|+|..|-| ...|+|||+||++++...|..++..|+++||.|+++|+||||.|+.......... +
T Consensus 2 ~i~~~dG~~l~y~~~G~------~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 75 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGP------RDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYA 75 (275)
T ss_dssp EEECTTSCEEEEEEESC------TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHH
T ss_pred EEEecCCCEEEEEEecC------CCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccccccc
Confidence 47889999999999844 4567899999999999999999999999999999999999999986544433322 4
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcc-hHHHHHHHHhcCCC-ccEEEEcCCccCH------------HHHHHHHHH----
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSM-GAVTSLLYGAEDPS-IAGMVLDSAFSDL------------FDLMLELVD---- 181 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSm-GG~lAl~~A~~~p~-v~~lVl~sp~~~~------------~~~~~~~~~---- 181 (486)
+|+.++++.+ +.++++++|||+ ||.+++.+|..+|+ |+++|++++.... .........
T Consensus 76 ~~~~~~l~~l----~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T d1a88a_ 76 ADVAALTEAL----DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAA 151 (275)
T ss_dssp HHHHHHHHHH----TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred cccccccccc----cccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhh
Confidence 5555555554 668889999997 56667778888998 9999998754310 011110000
Q ss_pred --------HHhhhC-------CchhHHHHHHHHHHHHhhh--h----cccccccchhhhCCCCCCCEEEEEeCCCCCCCH
Q 011425 182 --------VYKIRL-------PKFTVKMAVQYMRRVIQKK--A----KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240 (486)
Q Consensus 182 --------~~~~~~-------p~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (486)
...... ................... . .......+....+.++++|+|+++|++|.++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~ 231 (275)
T d1a88a_ 152 NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPY 231 (275)
T ss_dssp CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCS
T ss_pred hhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCCcCH
Confidence 000000 0000000001110000000 0 000111233345567899999999999999998
Q ss_pred HHHH-HHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 241 RHSD-LIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 241 ~~~~-~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
.... .+.+.+ ++.+++++++ ||+.. .|+++.+.|.+||+
T Consensus 232 ~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 232 ADAAPKSAELL-ANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp TTTHHHHHHHS-TTEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHc
Confidence 7554 444444 4578889997 99866 89999999999997
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.93 E-value=1.6e-24 Score=204.95 Aligned_cols=224 Identities=15% Similarity=0.101 Sum_probs=145.9
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh---HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD---ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~---~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
+.||.+|+|..+ +..|+|||+||++++... |..++..|++ ||+|+++|+||||.|+........ +
T Consensus 8 ~~dg~~l~y~~~--------G~g~~vvllHG~~~~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~---~ 75 (268)
T d1j1ia_ 8 NAGGVETRYLEA--------GKGQPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTAKPDIEYTQ---D 75 (268)
T ss_dssp EETTEEEEEEEE--------CCSSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCSSCCCH---H
T ss_pred EECCEEEEEEEE--------cCCCeEEEECCCCCCccHHHHHHHHHHHHhc-CCEEEEEcccccccccCCcccccc---c
Confidence 458999998765 345789999999876554 4456666754 899999999999999865444332 3
Q ss_pred HHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH---HH-------------HHHHHHH
Q 011425 121 DLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF---DL-------------MLELVDV 182 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~---~~-------------~~~~~~~ 182 (486)
++...+..+.+..+. .+++++||||||.+++.+|.++|+ |+++|++++..... .. .......
T Consensus 76 ~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (268)
T d1j1ia_ 76 RRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKA 155 (268)
T ss_dssp HHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHH
T ss_pred cccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhhhHHHHHH
Confidence 333333222232244 679999999999999999999998 99999988753211 00 0011111
Q ss_pred HhhhCCchhHHHHHHHHHH------------HHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 183 YKIRLPKFTVKMAVQYMRR------------VIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
................... ..... ............+.++++|+|+|+|++|.++|++.+..+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~ 234 (268)
T d1j1ia_ 156 LTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWI-REQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI 234 (268)
T ss_dssp HSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHH-HHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred HhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhh-hccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC
Confidence 1000000000000000000 00000 0001111233557789999999999999999999999999988
Q ss_pred CCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 251 AGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 251 ~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
++ .+++++++ ||+.+ .|+++.+.|.+||.+
T Consensus 235 ~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 235 DD-SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp TT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CC-CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 54 67888887 99866 799999999999975
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.92 E-value=6.7e-25 Score=209.79 Aligned_cols=227 Identities=14% Similarity=0.075 Sum_probs=146.7
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh---hHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc--chH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW--HEK 119 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~---~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~--~~~ 119 (486)
.++.++++... ++...|+|||+||++++.. .|..++..|++ ||.|+++|+||||.|+........ ...
T Consensus 11 ~~~~~~h~~~~------G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 83 (281)
T d1c4xa_ 11 SGTLASHALVA------GDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWV 83 (281)
T ss_dssp CTTSCEEEEEE------SCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSHHHHH
T ss_pred cCCEEEEEEEE------ecCCCCEEEEECCCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCCCccccccccccccchhhH
Confidence 45577887765 4456799999999987654 35567777765 899999999999999865433221 112
Q ss_pred HHHH-HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH----HHHHHHHH------------H
Q 011425 120 DDLK-VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL----FDLMLELV------------D 181 (486)
Q Consensus 120 ~Dl~-~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~----~~~~~~~~------------~ 181 (486)
++.. ++++.+ +..+.++++++||||||.+++.+|.++|+ |+++|++++.... ...+.... .
T Consensus 84 ~~~~~~i~~~i-~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (281)
T d1c4xa_ 84 GMRVEQILGLM-NHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRE 162 (281)
T ss_dssp HHHHHHHHHHH-HHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHH
T ss_pred HHhhhhccccc-cccccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcccchhhh
Confidence 2322 233333 33366899999999999999999999998 9999998875321 01111100 0
Q ss_pred HHhh--hCCc-h--hHHHHHHHH------------HHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHH
Q 011425 182 VYKI--RLPK-F--TVKMAVQYM------------RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSD 244 (486)
Q Consensus 182 ~~~~--~~p~-~--~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~ 244 (486)
.... ..+. . ......... ...+................+.++++|+|+|+|++|.++|++.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 242 (281)
T d1c4xa_ 163 LIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSL 242 (281)
T ss_dssp HHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHH
T ss_pred hhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHH
Confidence 0000 0000 0 000000000 000000000001112233456789999999999999999999999
Q ss_pred HHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 245 LIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 245 ~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
.+.+.+++ .+++++++ ||+.+ .|+++++.|.+||.
T Consensus 243 ~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 243 YLTKHLKH-AELVVLDRCGHWAQLERWDAMGPMLMEHFR 280 (281)
T ss_dssp HHHHHCSS-EEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHhC
Confidence 99998854 57888887 99876 89999999999996
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.92 E-value=1.4e-24 Score=204.55 Aligned_cols=230 Identities=15% Similarity=0.166 Sum_probs=150.3
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
+|.+.||.+|+|..+ +..|+|||+||++++...|..++..|.++||+|+++|+||||.|+.......+ +
T Consensus 2 ~f~~~dG~~l~y~~~--------G~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~---~ 70 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDW--------GSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDY---D 70 (271)
T ss_dssp EEECTTSCEEEEEEE--------SSSSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSH---H
T ss_pred EEEeECCeEEEEEEE--------cCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccc---c
Confidence 477889999998776 34578999999999999999999999999999999999999999865544433 3
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHH-HHhcCCC-ccEEEEcCCccCH------------HHHHHHH----HHH
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLL-YGAEDPS-IAGMVLDSAFSDL------------FDLMLEL----VDV 182 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~-~A~~~p~-v~~lVl~sp~~~~------------~~~~~~~----~~~ 182 (486)
++...+..+....+.++++++|||+||.+++. +|..+|+ +.+++++++.... ....... ...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T d1va4a_ 71 TFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKD 150 (271)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHH
T ss_pred cccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhh
Confidence 34434434444446789999999999877655 4566777 8999987764321 0000000 000
Q ss_pred -------H-----hhhCCchhHHHH-HHHHHHHHhhh--h----cccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHH
Q 011425 183 -------Y-----KIRLPKFTVKMA-VQYMRRVIQKK--A----KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHS 243 (486)
Q Consensus 183 -------~-----~~~~p~~~~~~~-~~~~~~~~~~~--~----~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 243 (486)
+ ............ ........... . .......+....+.++++|+++++|++|.++|++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~ 230 (271)
T d1va4a_ 151 RAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETT 230 (271)
T ss_dssp HHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGT
T ss_pred hhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHHH
Confidence 0 000000000000 00000000000 0 000011123345567889999999999999999888
Q ss_pred HHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 244 DLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 244 ~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
.++.+.+.+..+++++++ ||+.. +|+++.+.|.+||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 231 GKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 777665545678888887 99866 799999999999964
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.92 E-value=7e-24 Score=202.59 Aligned_cols=222 Identities=14% Similarity=0.137 Sum_probs=147.5
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHH---HHhccCCeEEEEEcCCCCCCCCCCCCCCCcc--hHHH
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA---VILLPSNITLFTLDFSGSGLSDGDYVSLGWH--EKDD 121 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~---~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~--~~~D 121 (486)
+.+|+|... +..|+|||+||++++...|..+. ..+...||.|+++|+||||.|.......... .++|
T Consensus 19 ~~~i~y~~~--------G~G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 90 (283)
T d2rhwa1 19 DFNIHYNEA--------GNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 90 (283)
T ss_dssp EEEEEEEEE--------CCSSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHH
T ss_pred CEEEEEEEE--------cCCCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhh
Confidence 455665543 34589999999999988887653 3456789999999999999997654433211 1345
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH--------HHHHHHHHHHHh--------
Q 011425 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL--------FDLMLELVDVYK-------- 184 (486)
Q Consensus 122 l~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~--------~~~~~~~~~~~~-------- 184 (486)
+.++++.+ +.++++++||||||.+++.+|.++|+ |+++|+++|.... ............
T Consensus 91 i~~li~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (283)
T d2rhwa1 91 VKGLMDAL----DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLK 166 (283)
T ss_dssp HHHHHHHH----TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHH
T ss_pred cccccccc----cccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHH
Confidence 55555544 67899999999999999999999998 9999998864310 000100000000
Q ss_pred ------hhCCch-hHHHHHHHHH----------HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHH
Q 011425 185 ------IRLPKF-TVKMAVQYMR----------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIF 247 (486)
Q Consensus 185 ------~~~p~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~ 247 (486)
...... .......... ..............+....+.++++|+++++|++|.+++++.+..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 246 (283)
T d2rhwa1 167 QMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLL 246 (283)
T ss_dssp HHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHH
T ss_pred HHHHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHH
Confidence 000000 0000000100 00111111111223445667788999999999999999999999999
Q ss_pred HHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 248 NAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 248 ~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
+.++ +.+++++++ ||+.. .|+++.+.|.+||++
T Consensus 247 ~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 247 WNID-DARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp HHSS-SEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred HhCC-CCEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 9885 467888887 99866 799999999999986
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.92 E-value=3e-25 Score=210.04 Aligned_cols=229 Identities=15% Similarity=0.149 Sum_probs=151.0
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
+|.+.||.+|+|..+ +..|+|||+||++++...|..++..|.++||.|+++|+||||.|+.......+ .
T Consensus 2 ~f~~~dG~~i~y~~~--------G~g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~---~ 70 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDW--------GSGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDM---D 70 (273)
T ss_dssp EEECTTSCEEEEEEE--------SCSSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSH---H
T ss_pred EEEeeCCcEEEEEEE--------CCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCccccccccccc---c
Confidence 578899999998876 34578999999999999999999999989999999999999999865443332 3
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHH-HhcCCC-ccEEEEcCCccCH------------HHHHHHH-------
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLY-GAEDPS-IAGMVLDSAFSDL------------FDLMLEL------- 179 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~-A~~~p~-v~~lVl~sp~~~~------------~~~~~~~------- 179 (486)
++.+.+..+.+..+..+.+++|||+||.+++.+ |...|+ |.+++++++.... .......
T Consensus 71 ~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
T d1a8sa_ 71 TYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLAD 150 (273)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHH
Confidence 333333333333467889999999988766655 455676 8999888754310 1111000
Q ss_pred ----HHHH-hhh-----CCc--hhHHHHHHHHHHHHhhh------hcccccccchhhhCCCCCCCEEEEEeCCCCCCCHH
Q 011425 180 ----VDVY-KIR-----LPK--FTVKMAVQYMRRVIQKK------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (486)
Q Consensus 180 ----~~~~-~~~-----~p~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 241 (486)
.... ... .+. ........+........ ........+....+.++++|+|+++|++|.++|.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~ 230 (273)
T d1a8sa_ 151 RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIE 230 (273)
T ss_dssp HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCST
T ss_pred HHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCCCCCCCHH
Confidence 0000 000 000 00000011110000000 00001122344566788999999999999999998
Q ss_pred HHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHH
Q 011425 242 HSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (486)
Q Consensus 242 ~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~ 280 (486)
.+..+.+.+.++.+++++++ ||+.. +|+++++.|.+||+
T Consensus 231 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 231 ASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp TTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 88887777666778888987 99866 89999999999986
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.2e-24 Score=211.45 Aligned_cols=233 Identities=14% Similarity=0.104 Sum_probs=156.8
Q ss_pred EEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHH
Q 011425 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (486)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~ 120 (486)
.+...||.+|+|..+ +..|+|||+||++++...|..++..|+++||+|+++|+||||.|........+ ..+
T Consensus 15 ~v~~~~g~~i~y~~~--------G~gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~-~~~ 85 (322)
T d1zd3a2 15 YVTVKPRVRLHFVEL--------GSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEY-CME 85 (322)
T ss_dssp EEEEETTEEEEEEEE--------CCSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGG-SHH
T ss_pred EEEECCCCEEEEEEE--------cCCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEeccccccccccccccccc-ccc
Confidence 456678999998876 34589999999999999999999999999999999999999999865433322 244
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC-------HHHHHH---------------
Q 011425 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-------LFDLML--------------- 177 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~-------~~~~~~--------------- 177 (486)
++...+..+.+..+..+++++||||||.+++.+|.++|+ |.++|++++... ......
T Consensus 86 ~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (322)
T d1zd3a2 86 VLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPG 165 (322)
T ss_dssp HHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTT
T ss_pred ccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhccc
Confidence 555555444444477899999999999999999999998 999999875321 000000
Q ss_pred --------HHHHHHhh----hCC-------------------------c-hhHHHHHHHHHHHHhh----h-hcccc---
Q 011425 178 --------ELVDVYKI----RLP-------------------------K-FTVKMAVQYMRRVIQK----K-AKFDI--- 211 (486)
Q Consensus 178 --------~~~~~~~~----~~p-------------------------~-~~~~~~~~~~~~~~~~----~-~~~~~--- 211 (486)
.....+.. ... . ........+....... . ..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (322)
T d1zd3a2 166 VAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMER 245 (322)
T ss_dssp HHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSCHHH
T ss_pred hhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhccccccccccccccc
Confidence 00000000 000 0 0000000011000000 0 00000
Q ss_pred -cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHhc
Q 011425 212 -MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 212 -~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~l 283 (486)
...+......++++|+|+|+|++|.+++++....+.+.+++ .+++++++ ||+.. .|+++.+.|.+||++.-
T Consensus 246 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~~~~ 320 (322)
T d1zd3a2 246 NWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH-LKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDA 320 (322)
T ss_dssp HHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHT
T ss_pred ccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHhhcC
Confidence 01122344577899999999999999999988887776654 67788887 99876 79999999999999764
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=6.2e-25 Score=203.55 Aligned_cols=186 Identities=16% Similarity=0.148 Sum_probs=144.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHH--HHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc---hH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVILLPSNITLFTLDFSGSGLSDGDYVSLGWH---EK 119 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~--~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~---~~ 119 (486)
.+|..|+|..+.|. .+..+|+|||+||++++...|..+ +..|+++||+|+++|+||||.|++......+. ..
T Consensus 13 v~G~~i~y~~~~~~---~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~~~~~~ 89 (208)
T d1imja_ 13 VQGQALFFREALPG---SGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPG 89 (208)
T ss_dssp ETTEEECEEEEECS---SSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCT
T ss_pred ECCEEEEEEEecCC---CCCCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccccchhhhh
Confidence 58999999888875 345678999999999999988764 67899999999999999999997654332221 13
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQY 198 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 198 (486)
+++.++++.+ +.++++|+||||||.+++.+|..+|+ ++++|+++|.... .+
T Consensus 90 ~~l~~~~~~l----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~----------------~~-------- 141 (208)
T d1imja_ 90 SFLAAVVDAL----ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD----------------KI-------- 141 (208)
T ss_dssp HHHHHHHHHH----TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG----------------GS--------
T ss_pred hhhhhccccc----ccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccc----------------cc--------
Confidence 4555565555 66899999999999999999999998 9999999875421 00
Q ss_pred HHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHH
Q 011425 199 MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSV 275 (486)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I 275 (486)
....+.++++|+|+|+|++|.++|.. .+..+.++ +.+++++++ ||... .|++|.+.|
T Consensus 142 -----------------~~~~~~~i~~P~Lii~G~~D~~~~~~--~~~~~~~~-~~~~~~i~~~gH~~~~~~p~~~~~~l 201 (208)
T d1imja_ 142 -----------------NAANYASVKTPALIVYGDQDPMGQTS--FEHLKQLP-NHRVLIMKGAGHPCYLDKPEEWHTGL 201 (208)
T ss_dssp -----------------CHHHHHTCCSCEEEEEETTCHHHHHH--HHHHTTSS-SEEEEEETTCCTTHHHHCHHHHHHHH
T ss_pred -----------------ccccccccccccccccCCcCcCCcHH--HHHHHhCC-CCeEEEECCCCCchhhhCHHHHHHHH
Confidence 01223467899999999999998755 23444454 467778887 99754 899999999
Q ss_pred HHHHHH
Q 011425 276 SIFFYN 281 (486)
Q Consensus 276 ~~FL~~ 281 (486)
.+||++
T Consensus 202 ~~Fl~~ 207 (208)
T d1imja_ 202 LDFLQG 207 (208)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999985
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.92 E-value=1e-24 Score=216.54 Aligned_cols=247 Identities=14% Similarity=0.173 Sum_probs=162.2
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEe--cCCCCCCCCCcEEEEeCCCCCChhhHH------HHHHHhccCCeEEEEEcCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYM--PSPFPEDTPLPCVVYCHGNSGCRADAN------EAAVILLPSNITLFTLDFSGSG 105 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~--P~~~~~~~~~p~VV~lHG~gg~~~~~~------~~~~~L~~~Gy~Vv~~D~rG~G 105 (486)
.|+-+++.+++.||..|..+.+. +...+..+++|+|||+||++++...|. .++..|+++||.|+++|+||||
T Consensus 24 ~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G 103 (377)
T d1k8qa_ 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNT 103 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred CCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCC
Confidence 44557788999999988875432 223334567899999999999988883 3788999999999999999999
Q ss_pred CCCCCCC---------CCCcch--HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEc---CCcc
Q 011425 106 LSDGDYV---------SLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLD---SAFS 170 (486)
Q Consensus 106 ~S~~~~~---------~~~~~~--~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~---sp~~ 170 (486)
.|+.... ...+.+ ..|+.++|+++++..+.++++|+||||||.+++.+|..+|+ +++++++ ++..
T Consensus 104 ~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~ 183 (377)
T d1k8qa_ 104 WARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVA 183 (377)
T ss_dssp TSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCS
T ss_pred CCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccc
Confidence 9974221 111212 56889999999988888999999999999999999999997 5544442 2211
Q ss_pred CH--------------HHHH---------------HHHHHHHhhhCCchh------------------------------
Q 011425 171 DL--------------FDLM---------------LELVDVYKIRLPKFT------------------------------ 191 (486)
Q Consensus 171 ~~--------------~~~~---------------~~~~~~~~~~~p~~~------------------------------ 191 (486)
.. .... ....... .......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (377)
T d1k8qa_ 184 TVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATE-VCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSH 262 (377)
T ss_dssp CCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHH-TTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTT
T ss_pred cccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhh-hcchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhc
Confidence 10 0000 0000000 0000000
Q ss_pred ------HHHHHHHHHHHHhhh-hccccc-----------ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCC
Q 011425 192 ------VKMAVQYMRRVIQKK-AKFDIM-----------DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD 253 (486)
Q Consensus 192 ------~~~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~ 253 (486)
......+........ ..++.. .......+.+|++|+|+|+|+.|.+++++.++.+.+.+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~ 342 (377)
T d1k8qa_ 263 NPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNL 342 (377)
T ss_dssp CCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTE
T ss_pred ccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHCCCC
Confidence 000001110000000 000000 00112245678999999999999999999999999999876
Q ss_pred cEEEEeCC-CCCCC-----ChHHHHHHHHHHHHH
Q 011425 254 KNIIKFDG-DHNSS-----RPQFYYDSVSIFFYN 281 (486)
Q Consensus 254 ~~l~~~~g-gH~~~-----~p~~~~~~I~~FL~~ 281 (486)
.+++.+++ ||+.. .+++++..|.+||++
T Consensus 343 ~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 343 IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred eEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 67788887 99722 378999999999975
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.92 E-value=5.1e-24 Score=208.75 Aligned_cols=239 Identities=20% Similarity=0.221 Sum_probs=169.2
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
++.++|+|.+.||.+|.+++|.|.+ ..++.|+||++||+++....+.. ...|+++||.|+++|+||+|.|.+.....
T Consensus 53 ~~~~~v~~~s~dG~~l~~~l~~P~~--~~~~~P~Vv~~hG~~~~~~~~~~-~~~~a~~G~~v~~~D~rG~G~s~~~~~~~ 129 (322)
T d1vlqa_ 53 VEAYDVTFSGYRGQRIKGWLLVPKL--EEEKLPCVVQYIGYNGGRGFPHD-WLFWPSMGYICFVMDTRGQGSGWLKGDTP 129 (322)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEECC--SCSSEEEEEECCCTTCCCCCGGG-GCHHHHTTCEEEEECCTTCCCSSSCCCCC
T ss_pred eEEEEEEEECCCCcEEEEEEEeccC--CCCCccEEEEecCCCCCcCcHHH-HHHHHhCCCEEEEeeccccCCCCCCcccc
Confidence 3457899999999999999999975 34568999999999877665543 44678899999999999999986432111
Q ss_pred C--------------------------cchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEEc
Q 011425 115 G--------------------------WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLD 166 (486)
Q Consensus 115 ~--------------------------~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~ 166 (486)
. ...+.|+..+++++..+... .+++++|+|+||.+++.++...++++++|..
T Consensus 130 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~~~~a~v~~ 209 (322)
T d1vlqa_ 130 DYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCD 209 (322)
T ss_dssp BCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSSCCEEEEE
T ss_pred ccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCCCccEEEEe
Confidence 0 01256888899999887654 6899999999999999999999999999988
Q ss_pred CCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHh--hhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHH
Q 011425 167 SAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQ--KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSD 244 (486)
Q Consensus 167 sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~ 244 (486)
.+........... ...........+...... ..........++...+.++++|+|++||+.|.++|++.+.
T Consensus 210 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~ 282 (322)
T d1vlqa_ 210 VPFLCHFRRAVQL-------VDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVF 282 (322)
T ss_dssp SCCSCCHHHHHHH-------CCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHH
T ss_pred CCccccHHHHHhh-------ccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHH
Confidence 8766533322111 111111111111100000 0000011123566677889999999999999999999999
Q ss_pred HHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 245 LIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 245 ~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
+++++++.+++++++++ +|... .....+...+||+++|+
T Consensus 283 ~~~~~~~~~~~l~~~p~~~H~~~-~~~~~~~~~~~l~~~l~ 322 (322)
T d1vlqa_ 283 AAYNYYAGPKEIRIYPYNNHEGG-GSFQAVEQVKFLKKLFE 322 (322)
T ss_dssp HHHHHCCSSEEEEEETTCCTTTT-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCeEEEEECCCCCCCc-cccCHHHHHHHHHHHhC
Confidence 99999988899999997 99654 22333456789988763
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.92 E-value=2.4e-23 Score=198.79 Aligned_cols=231 Identities=11% Similarity=0.050 Sum_probs=149.3
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC-cc
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG-WH 117 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~-~~ 117 (486)
...+. .+|.+|+|..+ +..|+|||+||++++...|..++..|.+ +|+|+++|+||||.|........ ..
T Consensus 10 ~~~~~-~~~~~l~y~~~--------G~gp~vv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~ 79 (293)
T d1ehya_ 10 HYEVQ-LPDVKIHYVRE--------GAGPTLLLLHGWPGFWWEWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDLNDLSKY 79 (293)
T ss_dssp EEEEE-CSSCEEEEEEE--------ECSSEEEEECCSSCCGGGGHHHHHHHHT-TSEEEEECCTTSTTSCCCCTTCGGGG
T ss_pred ceEEE-ECCEEEEEEEE--------CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEecCCcccCCccccccccccc
Confidence 34344 46778887664 3468999999999999999999998866 79999999999999975433221 12
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHH----H----------------
Q 011425 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL----M---------------- 176 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~----~---------------- 176 (486)
..+++...+..+.+..+..+++++||||||.+++.+|.++|+ +.++|++++....... .
T Consensus 80 ~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (293)
T d1ehya_ 80 SLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDM 159 (293)
T ss_dssp CHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHH
T ss_pred cchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhccch
Confidence 245555555555555678999999999999999999999998 9999998875321000 0
Q ss_pred ------------HHHHHHH----hhhCCchhHHHHHHHHHHHHhh----------hhccc-ccccchhhhCCCCCCCEEE
Q 011425 177 ------------LELVDVY----KIRLPKFTVKMAVQYMRRVIQK----------KAKFD-IMDLNCLKLAPKTFIPALF 229 (486)
Q Consensus 177 ------------~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~l~~i~~PvLi 229 (486)
....... ..............+....... ..... ............+++|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvli 239 (293)
T d1ehya_ 160 AVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTM 239 (293)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEE
T ss_pred hhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCCceEE
Confidence 0000000 0000000000011111000000 00000 0000011123457899999
Q ss_pred EEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHH
Q 011425 230 GHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFF 279 (486)
Q Consensus 230 i~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL 279 (486)
|+|+.|.+++.+...++.+...++.+++++++ ||+.. .|+++++.|.+||
T Consensus 240 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ff 292 (293)
T d1ehya_ 240 IWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 292 (293)
T ss_dssp EEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred EEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHhh
Confidence 99999999998887776666556678888987 99866 7999999999987
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.91 E-value=1.6e-23 Score=198.96 Aligned_cols=223 Identities=16% Similarity=0.150 Sum_probs=141.0
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHH
Q 011425 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKV 124 (486)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~ 124 (486)
.+.+|+|..+ +..|+|||+||++++...|..++..|.+.||+|+++|+||||.|+.......+.. ++|+.+
T Consensus 11 ~~v~i~y~~~--------G~g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~ 82 (279)
T d1hkha_ 11 TPIELYYEDQ--------GSGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHT 82 (279)
T ss_dssp EEEEEEEEEE--------SSSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred CeEEEEEEEE--------ccCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhh
Confidence 3446666554 3468899999999999999999988988899999999999999986555444322 455555
Q ss_pred HHHHHHhcCCCCcEEEEEEcchH-HHHHHHHhcCCC-ccEEEEcCCccCH------------HHHHHHHHHHHhh-----
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGA-VTSLLYGAEDPS-IAGMVLDSAFSDL------------FDLMLELVDVYKI----- 185 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG-~lAl~~A~~~p~-v~~lVl~sp~~~~------------~~~~~~~~~~~~~----- 185 (486)
+++.+ +.++++|+|||||| .+++.+|..+|+ |.++|++++.... .............
T Consensus 83 ~i~~l----~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (279)
T d1hkha_ 83 VLETL----DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAW 158 (279)
T ss_dssp HHHHH----TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHH
T ss_pred hhhhc----CcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhh
Confidence 55554 67899999999996 566666777787 9999998764310 0000000000000
Q ss_pred -------------hC-CchhHHHHHHHHHHHHhhhhc--cc-----ccc-cchhhhCCCCCCCEEEEEeCCCCCCCHH-H
Q 011425 186 -------------RL-PKFTVKMAVQYMRRVIQKKAK--FD-----IMD-LNCLKLAPKTFIPALFGHASEDKFIRAR-H 242 (486)
Q Consensus 186 -------------~~-p~~~~~~~~~~~~~~~~~~~~--~~-----~~~-~~~~~~l~~i~~PvLii~G~~D~~vp~~-~ 242 (486)
.. ..................... +. ..+ .+....+..+++|+|+++|++|.+++.+ .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 238 (279)
T d1hkha_ 159 FTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDAT 238 (279)
T ss_dssp HHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTT
T ss_pred hhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHH
Confidence 00 000000000000000000000 00 000 0122334557899999999999999876 4
Q ss_pred HHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 243 SDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 243 ~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
.+.+.+.++ +.+++++++ ||+.. .|+++.+.|.+||++
T Consensus 239 ~~~~~~~~p-~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 239 ARRFHQAVP-EADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHHHHHHCT-TSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHhCC-CCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 566666665 467888887 99865 899999999999974
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.91 E-value=1.5e-24 Score=210.82 Aligned_cols=232 Identities=15% Similarity=0.038 Sum_probs=152.1
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~ 123 (486)
+.||.++++.-+-+. ...|+|||+||++++...|..++..|++.||+|+++|+||||.|+....... +..+++.
T Consensus 30 ~~~g~~~~y~~~G~~-----~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~-~~~~~~~ 103 (310)
T d1b6ga_ 30 GYPGLRAHYLDEGNS-----DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEED-YTFEFHR 103 (310)
T ss_dssp TCTTCEEEEEEEECT-----TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGG-CCHHHHH
T ss_pred CCCCEEEEEEEecCC-----CCCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCcccccccccccc-ccccccc
Confidence 458999988776432 3568999999999999999999999999999999999999999985432222 1234444
Q ss_pred HHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH----HHH-----------HH-HHHH---
Q 011425 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----LML-----------EL-VDVY--- 183 (486)
Q Consensus 124 ~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~----~~~-----------~~-~~~~--- 183 (486)
+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++...... ... .. ....
T Consensus 104 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (310)
T d1b6ga_ 104 NFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPS 183 (310)
T ss_dssp HHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCS
T ss_pred cchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhhhhhccch
Confidence 444444444477999999999999999999999998 999999876532100 000 00 0000
Q ss_pred --------hhhCCchhHHHHHHHHHHH------------Hhhhhccccc-----ccchhhhCCCCCCCEEEEEeCCCCCC
Q 011425 184 --------KIRLPKFTVKMAVQYMRRV------------IQKKAKFDIM-----DLNCLKLAPKTFIPALFGHASEDKFI 238 (486)
Q Consensus 184 --------~~~~p~~~~~~~~~~~~~~------------~~~~~~~~~~-----~~~~~~~l~~i~~PvLii~G~~D~~v 238 (486)
....+.........+.... .......... ..........+++|+|+++|+.|.++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~ 263 (310)
T d1b6ga_ 184 DLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLL 263 (310)
T ss_dssp SCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSS
T ss_pred hhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCCCCCC
Confidence 0000000000000000000 0000000000 00011123468899999999999999
Q ss_pred CHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHH
Q 011425 239 RARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 239 p~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~ 281 (486)
++.....+.+.+++..+++++++ ||+.. .|+.+.+.|.+||++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 264 GPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp SHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 99999999998877656777776 99865 577888999999874
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.91 E-value=6.4e-24 Score=194.92 Aligned_cols=217 Identities=18% Similarity=0.206 Sum_probs=142.3
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcch-HHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~-~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
++.++|||+||++++...|..+++.|+++||.|+++|+||||.|........... ..++..++.++... +..+++|+|
T Consensus 9 ~~~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G 87 (242)
T d1tqha_ 9 AGERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAG 87 (242)
T ss_dssp CSSCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhc-ccCceEEEE
Confidence 3457899999999999999999999999999999999999999875443333222 45555566555544 568999999
Q ss_pred EcchHHHHHHHHhcCCCccEEEEcCCccC--HHHHHHHHHHHH---hhhCCchhHHHHHHHHHHHHhhhhc----ccccc
Q 011425 143 RSMGAVTSLLYGAEDPSIAGMVLDSAFSD--LFDLMLELVDVY---KIRLPKFTVKMAVQYMRRVIQKKAK----FDIMD 213 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~v~~lVl~sp~~~--~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~ 213 (486)
|||||.+++.++..+|....+++..+... ............ ....... ................. .....
T Consensus 88 ~S~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (242)
T d1tqha_ 88 LSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKS-EEQIEQEMEKFKQTPMKTLKALQELI 166 (242)
T ss_dssp ETHHHHHHHHHHTTSCCSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCC-HHHHHHHHHHHTTSCCTTHHHHHHHH
T ss_pred cchHHHHhhhhcccCcccccccccccccccchhHHHHHHHHHHHHHhhhccch-hhhHHHHHhhhhhhccchhhcccccc
Confidence 99999999999999986444443333221 111111111100 0000000 00000000000000000 00000
Q ss_pred cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-CCcEEEEeCC-CCCCC---ChHHHHHHHHHHHHHh
Q 011425 214 LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 214 ~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~l~~~~g-gH~~~---~p~~~~~~I~~FL~~~ 282 (486)
......+..+.+|+|+++|++|.+++++.++.+++.+. ...+++++++ ||+.. .++++.+.|.+||++.
T Consensus 167 ~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 167 ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred cccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 12234566788999999999999999999999999986 4578999998 99854 4788999999999864
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.91 E-value=2.7e-24 Score=205.56 Aligned_cols=227 Identities=12% Similarity=0.118 Sum_probs=150.4
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~ 124 (486)
.+|.+|+|..+- .+..|+|||+||++++...|..++..|++ ||+|+++|+||||.|+....... .+++.+
T Consensus 14 ~~g~~i~y~~~G------~~~~p~lvllHG~~~~~~~~~~~~~~L~~-~~~vi~~d~~G~G~S~~~~~~~~---~~~~~~ 83 (291)
T d1bn7a_ 14 VLGERMHYVDVG------PRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDLDYF---FDDHVR 83 (291)
T ss_dssp ETTEEEEEEEES------CSSSSCEEEECCTTCCGGGGTTTHHHHTT-TSCEEEECCTTSTTSCCCSCCCC---HHHHHH
T ss_pred ECCEEEEEEEeC------CCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEEeCCCCccccccccccc---hhHHHH
Confidence 489999998873 34568899999999999999999888865 89999999999999986443333 344444
Q ss_pred HHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH------HHHHHHHHHHH---------hhhCC
Q 011425 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL------FDLMLELVDVY---------KIRLP 188 (486)
Q Consensus 125 ~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~------~~~~~~~~~~~---------~~~~p 188 (486)
.+..+.+..+..+++|+||||||.+++.+|..+|+ ++++|++++.... ..........+ .....
T Consensus 84 ~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
T d1bn7a_ 84 YLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQN 163 (291)
T ss_dssp HHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHHTTSC
T ss_pred HHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHHhhhhhh
Confidence 55555555577899999999999999999999998 8999887644321 00000000000 00000
Q ss_pred ch-------------hHHHHHHHHHH---------HHhhhhccccc---------ccchhhhCCCCCCCEEEEEeCCCCC
Q 011425 189 KF-------------TVKMAVQYMRR---------VIQKKAKFDIM---------DLNCLKLAPKTFIPALFGHASEDKF 237 (486)
Q Consensus 189 ~~-------------~~~~~~~~~~~---------~~~~~~~~~~~---------~~~~~~~l~~i~~PvLii~G~~D~~ 237 (486)
.+ .......+... ........... .......+..+++|+|+++|++|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 243 (291)
T d1bn7a_ 164 AFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVL 243 (291)
T ss_dssp HHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSS
T ss_pred hhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEEeCCCCC
Confidence 00 00000000000 00000000000 0011233456889999999999999
Q ss_pred CCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChHHHHHHHHHHHHHh
Q 011425 238 IRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 238 vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p~~~~~~I~~FL~~~ 282 (486)
+|++.+..+.+.+++ .+++.+++ ||+.+ .|+++.+.|.+||+..
T Consensus 244 ~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 244 IPPAEAARLAESLPN-CKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp SCHHHHHHHHHHSTT-EEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred cCHHHHHHHHHHCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 999999999999865 56767765 99876 7899999999998753
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.91 E-value=1.4e-22 Score=197.81 Aligned_cols=232 Identities=18% Similarity=0.164 Sum_probs=147.8
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~ 117 (486)
++-.+...||.+|+|..+ +++..|+|||+||++++...|.... .+...+|+|+++|+||||.|+.......+
T Consensus 12 ~~~~i~~~dg~~i~y~~~------G~~~g~pvvllHG~~g~~~~~~~~~-~~l~~~~~Vi~~D~rG~G~S~~~~~~~~~- 83 (313)
T d1azwa_ 12 QQGSLKVDDRHTLYFEQC------GNPHGKPVVMLHGGPGGGCNDKMRR-FHDPAKYRIVLFDQRGSGRSTPHADLVDN- 83 (313)
T ss_dssp EEEEEECSSSCEEEEEEE------ECTTSEEEEEECSTTTTCCCGGGGG-GSCTTTEEEEEECCTTSTTSBSTTCCTTC-
T ss_pred CCCEEEeCCCcEEEEEEe------cCCCCCEEEEECCCCCCccchHHHh-HHhhcCCEEEEEeccccCCCCccccccch-
Confidence 556677899999999887 3345688999999988877776543 44456899999999999999854333322
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH------------HHHHHh
Q 011425 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE------------LVDVYK 184 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~------------~~~~~~ 184 (486)
...++.+.+..+.+..+.++++|+||||||.+++.+|..+|+ |+++|++++.......... ....+.
T Consensus 84 ~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (313)
T d1azwa_ 84 TTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYL 163 (313)
T ss_dssp CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHHHH
Confidence 245555555555555578999999999999999999999998 9999998876543221110 001111
Q ss_pred hhCCch------------------hH--HHHHHHHHHH------------------------H---h-----hhhccccc
Q 011425 185 IRLPKF------------------TV--KMAVQYMRRV------------------------I---Q-----KKAKFDIM 212 (486)
Q Consensus 185 ~~~p~~------------------~~--~~~~~~~~~~------------------------~---~-----~~~~~~~~ 212 (486)
...... .. .....+.... + . ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
T d1azwa_ 164 NAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVE 243 (313)
T ss_dssp HTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSST
T ss_pred HhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhccccccc
Confidence 000000 00 0000000000 0 0 00000000
Q ss_pred ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHH
Q 011425 213 DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFF 279 (486)
Q Consensus 213 ~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL 279 (486)
..........+++|+|+|+|++|.++|++.+..+.+.+++ .+++++++ ||+..+|+ ..+.|.+.+
T Consensus 244 ~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p~-a~~~~i~~aGH~~~ep~-~~~~li~a~ 309 (313)
T d1azwa_ 244 DQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSAFEPE-NVDALVRAT 309 (313)
T ss_dssp THHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTT-SEEEEETTCCSSTTSHH-HHHHHHHHH
T ss_pred hhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCCCCCch-HHHHHHHHH
Confidence 0011223456789999999999999999999999999865 57888876 99877654 333333333
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.90 E-value=4.2e-23 Score=191.27 Aligned_cols=215 Identities=15% Similarity=0.070 Sum_probs=144.7
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcc
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSm 145 (486)
++.|||+||++++...|..++..|.++||.|+++|+||||.|+...... +...+...+++..+.......+++++||||
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lvghS~ 80 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEEL-RTLYDYTLPLMELMESLSADEKVILVGHSL 80 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGC-CSHHHHHHHHHHHHHTSCSSSCEEEEEETT
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCC-cchHHHHHHHhhhhhcccccccccccccch
Confidence 4789999999999999999999999999999999999999998654332 121334445555555554557999999999
Q ss_pred hHHHHHHHHhcCCC-ccEEEEcCCccCH-----HHHHHHHHHHHhhhCC------------------chhHHHHHHHH--
Q 011425 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDL-----FDLMLELVDVYKIRLP------------------KFTVKMAVQYM-- 199 (486)
Q Consensus 146 GG~lAl~~A~~~p~-v~~lVl~sp~~~~-----~~~~~~~~~~~~~~~p------------------~~~~~~~~~~~-- 199 (486)
||.+++.++..+|+ +.++|++++.... ................ ...........
T Consensus 81 Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (258)
T d1xkla_ 81 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQ 160 (258)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTST
T ss_pred hHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHHHhhh
Confidence 99999999999998 9999998765421 1111111110000000 00000000000
Q ss_pred -------HHHHhhhhccc-----ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 011425 200 -------RRVIQKKAKFD-----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 200 -------~~~~~~~~~~~-----~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~ 266 (486)
........... ....+....+..+.+|+++|+|++|.++|++..+.+.+.+++ .+++++++ ||+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~ 239 (258)
T d1xkla_ 161 LCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV-TEAIEIKGADHMAM 239 (258)
T ss_dssp TSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC-SEEEEETTCCSCHH
T ss_pred cccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCchH
Confidence 00000000000 001122334556789999999999999999999999998865 57888887 99965
Q ss_pred --ChHHHHHHHHHHHHHh
Q 011425 267 --RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 267 --~p~~~~~~I~~FL~~~ 282 (486)
.|+++++.|.+|++++
T Consensus 240 ~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 240 LCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp HHSHHHHHHHHHHHHHHC
T ss_pred HhCHHHHHHHHHHHHHhc
Confidence 8999999999999875
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.90 E-value=8.7e-23 Score=194.33 Aligned_cols=235 Identities=17% Similarity=0.168 Sum_probs=161.1
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCC-----ChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG-----CRADANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg-----~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
+.+++.|...+|.+|.+.+++|++...+++.|+||++||+++ ....+......++.+||.|+.+|+||+|.....
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~ 81 (258)
T d2bgra2 2 PSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDK 81 (258)
T ss_dssp CEEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHH
T ss_pred CceeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchH
Confidence 458899999999999999999998766677799999999521 122222344467788999999999998755421
Q ss_pred -----CCCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHH
Q 011425 111 -----YVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (486)
Q Consensus 111 -----~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~ 182 (486)
....+..+..++.++++++.+.... ++++++|+|+||.+++.++..+|+ +.+++..++..............
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (258)
T d2bgra2 82 IMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTER 161 (258)
T ss_dssp HHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHH
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccccccch
Confidence 1112223467888899999887654 579999999999999999999998 56666665554321111000000
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEE
Q 011425 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIK 258 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~ 258 (486)
.. ..+.... ..... ...++...+.++ ++|+|++||++|.+||+.++.++++++. .++++++
T Consensus 162 ~~-~~~~~~~--~~~~~------------~~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~ 226 (258)
T d2bgra2 162 YM-GLPTPED--NLDHY------------RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMW 226 (258)
T ss_dssp HH-CCCSTTT--THHHH------------HHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEE
T ss_pred hc-ccccchh--hHHHh------------hcccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEE
Confidence 00 0111000 00000 011222233333 3799999999999999999999988764 4678999
Q ss_pred eCC-CCCCC---ChHHHHHHHHHHHHHhcCC
Q 011425 259 FDG-DHNSS---RPQFYYDSVSIFFYNVLHP 285 (486)
Q Consensus 259 ~~g-gH~~~---~p~~~~~~I~~FL~~~l~~ 285 (486)
+++ +|.+. ....+.+.+.+||++++..
T Consensus 227 ~~g~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 257 (258)
T d2bgra2 227 YTDEDHGIASSTAHQHIYTHMSHFIKQCFSL 257 (258)
T ss_dssp ETTCCTTCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ECCCCCCCCCCccHHHHHHHHHHHHHHHhcC
Confidence 998 99765 3567889999999999864
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.89 E-value=5e-22 Score=189.67 Aligned_cols=234 Identities=15% Similarity=0.091 Sum_probs=150.8
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcc
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~ 117 (486)
+.-.+.+.||.+|+|..+- ++..|+|||+||++++...|..+...|. +||+|+++|+||||.|........+
T Consensus 12 ~~~~v~~~dG~~i~y~~~G------~~~g~pvvllHG~~~~~~~w~~~~~~l~-~~~~vi~~D~rG~G~S~~~~~~~~~- 83 (313)
T d1wm1a_ 12 DSGWLDTGDGHRIYWELSG------NPNGKPAVFIHGGPGGGISPHHRQLFDP-ERYKVLLFDQRGCGRSRPHASLDNN- 83 (313)
T ss_dssp EEEEEECSSSCEEEEEEEE------CTTSEEEEEECCTTTCCCCGGGGGGSCT-TTEEEEEECCTTSTTCBSTTCCTTC-
T ss_pred cCCEEEeCCCcEEEEEEec------CCCCCeEEEECCCCCcccchHHHHHHhh-cCCEEEEEeCCCccccccccccccc-
Confidence 3455777899999998873 2346789999999999999988775554 5999999999999999754443332
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHH------------HHHh
Q 011425 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELV------------DVYK 184 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~------------~~~~ 184 (486)
...++.+.+..+....+..+++++|||+||.+++.+|...|+ |.++|++++............ ....
T Consensus 84 ~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (313)
T d1wm1a_ 84 TTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVL 163 (313)
T ss_dssp SHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHH
T ss_pred chhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhhh
Confidence 244555555555555578999999999999999999999998 899998876654221111000 0000
Q ss_pred hh-C----------------CchhHHHHHHHHHHHHhh----------------------------------hhcccccc
Q 011425 185 IR-L----------------PKFTVKMAVQYMRRVIQK----------------------------------KAKFDIMD 213 (486)
Q Consensus 185 ~~-~----------------p~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~ 213 (486)
.. . .................. ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
T d1wm1a_ 164 SILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDD 243 (313)
T ss_dssp TTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTT
T ss_pred hhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccccch
Confidence 00 0 000000000000000000 00000000
Q ss_pred cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCCChHHHHHHHHHHHHH
Q 011425 214 LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYN 281 (486)
Q Consensus 214 ~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~ 281 (486)
.........+++|+|+|+|++|.++|++.++.+.+.+++ .+++++++ ||...+|+.+. .+++.+++
T Consensus 244 ~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p~-a~~~~i~~aGH~~~eP~~~~-~lv~a~~~ 310 (313)
T d1wm1a_ 244 QLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE-AELHIVEGAGHSYDEPGILH-QLMIATDR 310 (313)
T ss_dssp HHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTT-SEEEEETTCCSSTTSHHHHH-HHHHHHHH
T ss_pred hhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCCC-CEEEEECCCCCCcCCchHHH-HHHHHHHH
Confidence 111233445789999999999999999999999999865 67888887 99876665444 45555554
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.89 E-value=3.5e-23 Score=192.51 Aligned_cols=211 Identities=13% Similarity=0.146 Sum_probs=139.8
Q ss_pred EEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHH-HHHHHHHhcCCCCcEEEEEEcchH
Q 011425 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK-VVVSYLRGNKQTSRIGLWGRSMGA 147 (486)
Q Consensus 69 VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~-~~i~~l~~~~~~~~i~LvGhSmGG 147 (486)
.||+||++++...|..++..|.++||+|+++|+||||.|+...... ...++.. .+.+.+.+....++++|+||||||
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg 82 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEI--GSFDEYSEPLLTFLEALPPGEKVILVGESCGG 82 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGC--CSHHHHTHHHHHHHHHSCTTCCEEEEEETTHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCC--CCHHHHHHHhhhhhhhhccccceeecccchHH
Confidence 5899999999999999999999999999999999999998654322 1233333 333444555556899999999999
Q ss_pred HHHHHHHhcCCC-ccEEEEcCCccCHH-----HHHHHHHHHHhhhCC----------------chhHHHHHH--------
Q 011425 148 VTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLELVDVYKIRLP----------------KFTVKMAVQ-------- 197 (486)
Q Consensus 148 ~lAl~~A~~~p~-v~~lVl~sp~~~~~-----~~~~~~~~~~~~~~p----------------~~~~~~~~~-------- 197 (486)
.+++.++..+|+ |+++|+++++.... ............... .........
T Consensus 83 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (256)
T d3c70a1 83 LNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGP 162 (256)
T ss_dssp HHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCH
T ss_pred HHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcch
Confidence 999999999998 99999988654211 111111111000000 000000000
Q ss_pred ---HHHHHHhhhhcc---cccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--Ch
Q 011425 198 ---YMRRVIQKKAKF---DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RP 268 (486)
Q Consensus 198 ---~~~~~~~~~~~~---~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~--~p 268 (486)
............ .............+++|+++|+|++|.++|++..+.+.+.+++ .+++++++ ||+.+ .|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~agH~~~~e~P 241 (256)
T d3c70a1 163 EEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP-DKVYKVEGGDHKLQLTKT 241 (256)
T ss_dssp HHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC-SEEEECCSCCSCHHHHSH
T ss_pred hhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCchHHhCH
Confidence 000000000000 0001112223445679999999999999999999999998865 57888887 99876 89
Q ss_pred HHHHHHHHHHHHHh
Q 011425 269 QFYYDSVSIFFYNV 282 (486)
Q Consensus 269 ~~~~~~I~~FL~~~ 282 (486)
+++++.|.+|++++
T Consensus 242 ~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 242 KEIAEILQEVADTY 255 (256)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999864
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.89 E-value=5.8e-23 Score=195.17 Aligned_cols=230 Identities=13% Similarity=0.102 Sum_probs=148.8
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCc--chH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW--HEK 119 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~--~~~ 119 (486)
|...+|.+|+|..+ +.+|+|||+||++++...|..++..|++ +|+|+++|+||||.|+........ ...
T Consensus 12 fi~~~g~~i~y~~~--------G~g~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 82 (298)
T d1mj5a_ 12 FIEIKGRRMAYIDE--------GTGDPILFQHGNPTSSYLWRNIMPHCAG-LGRLIACDLIGMGDSDKLDPSGPERYAYA 82 (298)
T ss_dssp EEEETTEEEEEEEE--------SCSSEEEEECCTTCCGGGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSCSTTSSCHH
T ss_pred EEEECCEEEEEEEE--------cCCCcEEEECCCCCCHHHHHHHHHHHhc-CCEEEEEeCCCCCCCCCCccccccccccc
Confidence 33458999998765 3468999999999999999999988876 699999999999999865433221 223
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH----------HHHHHH----HHHHh
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF----------DLMLEL----VDVYK 184 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~----------~~~~~~----~~~~~ 184 (486)
.++..++..+......++++++||||||.+++.+|.++|+ |.+++++++..... ...... .....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (298)
T d1mj5a_ 83 EHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELV 162 (298)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHH
T ss_pred hhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhhhhhhh
Confidence 4455555566666667899999999999999999999998 99998876543210 000000 00000
Q ss_pred hhC-------------CchhHHHHHHHHHH----------HHhhhhcccc---------cccchhhhCCCCCCCEEEEEe
Q 011425 185 IRL-------------PKFTVKMAVQYMRR----------VIQKKAKFDI---------MDLNCLKLAPKTFIPALFGHA 232 (486)
Q Consensus 185 ~~~-------------p~~~~~~~~~~~~~----------~~~~~~~~~~---------~~~~~~~~l~~i~~PvLii~G 232 (486)
... .............. .......... ...+....+..+.+|+++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 242 (298)
T d1mj5a_ 163 LQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINA 242 (298)
T ss_dssp TTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEE
T ss_pred hhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhcceeEEEEec
Confidence 000 00000000000000 0000000000 001122345678999999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC--ChHHHHHHHHHHHHHh
Q 011425 233 SEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 233 ~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~--~p~~~~~~I~~FL~~~ 282 (486)
++|.+++. ....+.+.++ ...++++++||+.. .|+++.+.|.+||++.
T Consensus 243 ~~d~~~~~-~~~~~~~~~p-~~~~~~~~~GH~~~~e~P~~v~~~i~~fl~~~ 292 (298)
T d1mj5a_ 243 EPGALTTG-RMRDFCRTWP-NQTEITVAGAHFIQEDSPDEIGAAIAAFVRRL 292 (298)
T ss_dssp EECSSSSH-HHHHHHTTCS-SEEEEEEEESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred CCCCcChH-HHHHHHHHCC-CCEEEEeCCCCchHHhCHHHHHHHHHHHHhhh
Confidence 99987764 4566666665 45667777899976 7999999999999986
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=2.2e-22 Score=189.38 Aligned_cols=209 Identities=13% Similarity=0.102 Sum_probs=136.6
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
.+.|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.... ....|+. +.+... ..++++++||
T Consensus 9 ~g~~~lvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~----~~~~d~~---~~~~~~-~~~~~~l~Gh 79 (256)
T d1m33a_ 9 QGNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFGA----LSLADMA---EAVLQQ-APDKAIWLGW 79 (256)
T ss_dssp CCSSEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTCCSCCC----CCHHHHH---HHHHTT-SCSSEEEEEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEeCCCCCCcccccc----ccccccc---cccccc-cccceeeeec
Confidence 3457899999999999999999988875 79999999999999975321 2234443 333333 4589999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCccCH----------HHHHHHH-----------HHHHhh--hCCchhHHHHHHHH
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDL----------FDLMLEL-----------VDVYKI--RLPKFTVKMAVQYM 199 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~~~----------~~~~~~~-----------~~~~~~--~~p~~~~~~~~~~~ 199 (486)
||||.+++.+|.++|+ +++++++++.... ....... ...+.. .............+
T Consensus 80 S~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T d1m33a_ 80 SLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARAL 159 (256)
T ss_dssp THHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHH
T ss_pred ccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccchhhHHHHH
Confidence 9999999999999998 8888887653210 0000000 000000 00000011111111
Q ss_pred HHHHhhhhc----------ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC--
Q 011425 200 RRVIQKKAK----------FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-- 266 (486)
Q Consensus 200 ~~~~~~~~~----------~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-- 266 (486)
......... ......+....+.++++|+|+|+|++|.++|++.+..+.+.+++ .+++++++ ||+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~~-~~~~~i~~~gH~~~~e 238 (256)
T d1m33a_ 160 KKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAKAAHAPFIS 238 (256)
T ss_dssp HHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTT-CEEEEETTCCSCHHHH
T ss_pred HHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHCCC-CEEEEECCCCCchHHH
Confidence 111000000 00011233456678899999999999999999988888777754 57888887 99865
Q ss_pred ChHHHHHHHHHHHHHh
Q 011425 267 RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 267 ~p~~~~~~I~~FL~~~ 282 (486)
+|+++++.|.+|+++.
T Consensus 239 ~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 239 HPAEFCHLLVALKQRV 254 (256)
T ss_dssp SHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHc
Confidence 8999999999999863
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2e-22 Score=191.89 Aligned_cols=223 Identities=16% Similarity=0.182 Sum_probs=151.9
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC---hhhH--HHHHHHhccCCeEEEEEcCCCCCCCCC-----CCCCC
Q 011425 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC---RADA--NEAAVILLPSNITLFTLDFSGSGLSDG-----DYVSL 114 (486)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~---~~~~--~~~~~~L~~~Gy~Vv~~D~rG~G~S~~-----~~~~~ 114 (486)
.||..|.++++.|.+...+++.|+||++||+++. ...| ......|+++||.|+++|+||.+.... .....
T Consensus 10 ~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~ 89 (258)
T d1xfda2 10 IDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRL 89 (258)
T ss_dssp ETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCT
T ss_pred eCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccc
Confidence 4999999999999877666778999999996321 1112 234457889999999999998654321 12223
Q ss_pred CcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-----ccEEEEcCCccCHHHHHHHHHHHHhhhC
Q 011425 115 GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-----IAGMVLDSAFSDLFDLMLELVDVYKIRL 187 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-----v~~lVl~sp~~~~~~~~~~~~~~~~~~~ 187 (486)
+..++.|+.++++++.++... ++|+++|+|+||.+++.++...++ +...+...+..............+. ..
T Consensus 90 g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 168 (258)
T d1xfda2 90 GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYL-GL 168 (258)
T ss_dssp TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHH-CC
T ss_pred hhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccccccccccc-cc
Confidence 344588999999999998665 689999999999999988877654 6676766665432111000000000 00
Q ss_pred CchhHHHHHHHHHHHHhhhhcccccccchhhhCCC-CCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-C
Q 011425 188 PKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK-TFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-D 262 (486)
Q Consensus 188 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-g 262 (486)
+. .........+....+.. .++|+|++||+.|..||++++.++++.+. .+.+++++++ +
T Consensus 169 ~~----------------~~~~~~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~ 232 (258)
T d1xfda2 169 HG----------------LDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDES 232 (258)
T ss_dssp CS----------------SCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCC
T ss_pred cc----------------cchHHhhccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCC
Confidence 00 00001111122223333 46899999999999999999988887653 4678999998 9
Q ss_pred CCCCC---hHHHHHHHHHHHHHhcC
Q 011425 263 HNSSR---PQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 263 H~~~~---p~~~~~~I~~FL~~~l~ 284 (486)
|.+.. ...+.+.+.+||+++++
T Consensus 233 H~~~~~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 233 HYFTSSSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 98763 45677899999998875
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.86 E-value=3.4e-20 Score=172.52 Aligned_cols=203 Identities=13% Similarity=0.169 Sum_probs=163.1
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCC---CCChhh--HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGN---SGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~---gg~~~~--~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
+|.|..++| +|.++++.| ..++.|++|++||. |++... ...++..|.+.||.|+.+|+||.|.|.+.+..
T Consensus 2 ev~i~g~~G-~Le~~~~~~----~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~ 76 (218)
T d2i3da1 2 EVIFNGPAG-RLEGRYQPS----KEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDH 76 (218)
T ss_dssp EEEEEETTE-EEEEEEECC----SSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCS
T ss_pred cEEEeCCCc-cEEEEEeCC----CCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCcccccc
Confidence 366888898 799876533 33567899999984 555433 45678889999999999999999999988754
Q ss_pred CCcchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhCCchhH
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTV 192 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~ 192 (486)
. ..+.+|..++++|+..+... .+++++|+|+||.+++.++...+.+.+++++.+.....
T Consensus 77 ~-~~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~~~~~~~~~~~~~~~------------------- 136 (218)
T d2i3da1 77 G-AGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAPQPNTY------------------- 136 (218)
T ss_dssp S-HHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTTEEEEEEESCCTTTS-------------------
T ss_pred c-hhHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhccccceeecccccccc-------------------
Confidence 3 34578999999999887654 78999999999999999999998888888888775410
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC----CcEEEEeCC-CCCCC-
Q 011425 193 KMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG----DKNIIKFDG-DHNSS- 266 (486)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~----~~~l~~~~g-gH~~~- 266 (486)
....+..+.+|+|+++|..|.+++......+.+.+.. ..++++++| +|++.
T Consensus 137 -----------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~g 193 (218)
T d2i3da1 137 -----------------------DFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNG 193 (218)
T ss_dssp -----------------------CCTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTT
T ss_pred -----------------------chhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCcC
Confidence 0123445678999999999999999999999888753 347888997 99987
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCC
Q 011425 267 RPQFYYDSVSIFFYNVLHPPQIP 289 (486)
Q Consensus 267 ~p~~~~~~I~~FL~~~l~~~~~~ 289 (486)
..+++.+.|.+||+++|.+...|
T Consensus 194 ~~~~l~~~v~~~l~~~l~~~~~p 216 (218)
T d2i3da1 194 KVDELMGECEDYLDRRLNGELVP 216 (218)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSSC
T ss_pred CHHHHHHHHHHHHHHhcCCCCCC
Confidence 67899999999999999876554
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.86 E-value=2e-21 Score=180.42 Aligned_cols=211 Identities=14% Similarity=0.052 Sum_probs=126.0
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
...|+|||+||++++...|..++..|++.||.|+++|+||||.|........ . ..+.......+.......+++++||
T Consensus 14 ~~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~lvGh 91 (264)
T d1r3da_ 14 ARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNF-A-EAVEMIEQTVQAHVTSEVPVILVGY 91 (264)
T ss_dssp TTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC--------C-HHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred CCCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccc-c-hhhhhhhhcccccccccCceeeeee
Confidence 5678999999999999999999999998899999999999999975443222 1 1111222222233334578999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEEcCCcc-----C-HHHHHH--HHHH---HHhhhCC---------------chhHHHHH
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFS-----D-LFDLML--ELVD---VYKIRLP---------------KFTVKMAV 196 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl~sp~~-----~-~~~~~~--~~~~---~~~~~~p---------------~~~~~~~~ 196 (486)
||||.+++.+|..+|. +.++++..+.. . ...... .... ....... ........
T Consensus 92 S~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T d1r3da_ 92 SLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQ 171 (264)
T ss_dssp THHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTCCHHHHH
T ss_pred cchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhcccchHHHH
Confidence 9999999999999997 66666543221 1 111000 0000 0000000 00000011
Q ss_pred HHHHHHHh---------hhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 011425 197 QYMRRVIQ---------KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (486)
Q Consensus 197 ~~~~~~~~---------~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~ 266 (486)
........ ...............+..+++|+++++|++|..+ ..+.+. .+.+++++++ ||+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~~--~~~~~~~i~~~gH~~~ 244 (264)
T d1r3da_ 172 TLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAES--SGLSYSQVAQAGHNVH 244 (264)
T ss_dssp HHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHH--HCSEEEEETTCCSCHH
T ss_pred HHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH-----HHHHhc--CCCeEEEECCCCCchH
Confidence 11000000 0000011111233455678999999999999643 233333 2467888887 99966
Q ss_pred --ChHHHHHHHHHHHHHhc
Q 011425 267 --RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 267 --~p~~~~~~I~~FL~~~l 283 (486)
.|+++.+.|.+||+...
T Consensus 245 ~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 245 HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHCHHHHHHHHHHHHHHHC
T ss_pred HHCHHHHHHHHHHHHHhcc
Confidence 89999999999999764
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.85 E-value=1.2e-20 Score=176.33 Aligned_cols=218 Identities=15% Similarity=0.081 Sum_probs=141.8
Q ss_pred ceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC
Q 011425 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 34 ~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
+++++.+++ .|.. +....|. +++|+||++||++++...|..++..|+++||.|+++|+||||.|......
T Consensus 2 ~~~~~~~~l---~g~~--~~~~~p~-----~~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~ 71 (238)
T d1ufoa_ 2 RVRTERLTL---AGLS--VLARIPE-----APKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPS 71 (238)
T ss_dssp CEEEEEEEE---TTEE--EEEEEES-----SCCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCC
T ss_pred EEEEEEEEE---CCEE--EEecCCC-----CCCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccc
Confidence 344555555 4543 3345553 46799999999999999999999999999999999999999999755433
Q ss_pred CCcch-----HHH----HHHHHHHHHhc--CCCCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHH
Q 011425 114 LGWHE-----KDD----LKVVVSYLRGN--KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDV 182 (486)
Q Consensus 114 ~~~~~-----~~D----l~~~i~~l~~~--~~~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~ 182 (486)
..... ..+ +.++..++... ....+++++|+||||.+++.++..+|++.+++.+.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~------- 144 (238)
T d1ufoa_ 72 SKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL------- 144 (238)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC-------
T ss_pred cccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeeeeecccccc-------
Confidence 32111 111 22222222221 1237999999999999999999999997776665443321100
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-----CCcEEE
Q 011425 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-----GDKNII 257 (486)
Q Consensus 183 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-----~~~~l~ 257 (486)
......... ...... ... .........++|+|++||+.|.+||++.+.++++.+. ...+++
T Consensus 145 -~~~~~~~~~-~~~~~~--------~~~----~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 210 (238)
T d1ufoa_ 145 -PQGQVVEDP-GVLALY--------QAP----PATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARF 210 (238)
T ss_dssp -CTTCCCCCH-HHHHHH--------HSC----GGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEE
T ss_pred -ccccccccc-cccchh--------hhh----hhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEE
Confidence 000000000 000000 000 0111223346899999999999999999999998874 245678
Q ss_pred EeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 258 KFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 258 ~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
.++| ||... .+..+.+.+||.++|.
T Consensus 211 ~~~g~gH~~~--~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 211 VEEGAGHTLT--PLMARVGLAFLEHWLE 236 (238)
T ss_dssp EETTCCSSCC--HHHHHHHHHHHHHHHH
T ss_pred EECCCCCccC--HHHHHHHHHHHHHHhc
Confidence 8888 99865 3457788899998874
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.84 E-value=7.4e-20 Score=181.64 Aligned_cols=265 Identities=16% Similarity=0.174 Sum_probs=174.0
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH----HHHHHHhccCCeEEEEEcCCCCCCCCCCCC
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA----NEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~----~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~ 112 (486)
.++|.++..||.+|.+.+|+|. ..++.|+||+.||+++..... ...+..|+++||.|+++|.||+|.|++.+.
T Consensus 5 ~~~v~ipmrDGv~L~~~vy~P~---~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~ 81 (347)
T d1ju3a2 5 ASNVMVPMRDGVRLAVDLYRPD---ADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFV 81 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEEEC---CSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCC
T ss_pred EeCeEEECCCCCEEEEEEEEcC---CCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccc
Confidence 5779999999999999999997 356789999999987643221 224567889999999999999999999875
Q ss_pred CCCcchHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHH-------------HHHH
Q 011425 113 SLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-------------DLML 177 (486)
Q Consensus 113 ~~~~~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~-------------~~~~ 177 (486)
... ....|+.++|+|+..+... ++|+++|+|+||.+++.+|+..|. ++++|...+..+.. ....
T Consensus 82 ~~~-~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~~~~~~~~~gg~~~~~~~~ 160 (347)
T d1ju3a2 82 PHV-DDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGALSVEALL 160 (347)
T ss_dssp TTT-THHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTCCCCHHHHH
T ss_pred ccc-chhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchhhhhhhhhcCCccchhhHH
Confidence 543 4467899999999998555 799999999999999999998877 89999877765431 0111
Q ss_pred HHHHHH-----hhhC---CchhH--HHHHHHHHHHHhhh----------------------h---cc--cccccchhhhC
Q 011425 178 ELVDVY-----KIRL---PKFTV--KMAVQYMRRVIQKK----------------------A---KF--DIMDLNCLKLA 220 (486)
Q Consensus 178 ~~~~~~-----~~~~---p~~~~--~~~~~~~~~~~~~~----------------------~---~~--~~~~~~~~~~l 220 (486)
...... .... +.... .............. . .+ .....++...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 240 (347)
T d1ju3a2 161 GWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDNDESWQSISLFERL 240 (347)
T ss_dssp HHHHHHHHHHHTTSSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCTHHHHTTTTCCSCCHHHHTTCCHHHH
T ss_pred HHHHHhhccccccccccCcchhhHHhhhhhhcccchhhhccCccccccccccchhhHHHHhhhcccchhhhhcCCHHHHh
Confidence 110000 0000 00000 00000000000000 0 00 00112345667
Q ss_pred CCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC--CCcEEEEeCCCCCCC---------------ChHHHHHHHHHHHHHhc
Q 011425 221 PKTFIPALFGHASEDKFIRARHSDLIFNAYA--GDKNIIKFDGDHNSS---------------RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 221 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~--~~~~l~~~~ggH~~~---------------~p~~~~~~I~~FL~~~l 283 (486)
.++++|+|+++|..|..++ .+..+++.+. ....+++.+++|... ...++....++||+.+|
T Consensus 241 ~~i~vP~L~i~G~~D~~~~--~~~~~~~~~~~~~~~~liigpw~H~~~~~~~~~~~~g~~~~~~~~~~~~~~l~wfD~~L 318 (347)
T d1ju3a2 241 GGLATPALITAGWYDGFVG--ESLRTFVAVKDNADARLVVGPWSHSNLTGRNADRKFGIAATYPIQEATTMHKAFFDRHL 318 (347)
T ss_dssp TTCCCCEEEEEEEECTTHH--HHHHHHHHHTTTSCEEEEEEEEESSCCSSEETTEECCGGGSCCHHHHHHHHHHHHHHHT
T ss_pred hcCCCCEEEeccccCCCcc--hhHHHHHHhhccCCceEEEcCccccCcccccCCCCCCccccccHHHHHHHHHHHHHHHh
Confidence 8899999999999998754 3455666654 356777777777643 13566778899999999
Q ss_pred CCCCCCCcccccccccccccccccC
Q 011425 284 HPPQIPSTHSIKAEKYYDLGALKFG 308 (486)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (486)
+........ .....++.+|..+|.
T Consensus 319 Kg~~~~~~~-~p~v~~~~~g~~~W~ 342 (347)
T d1ju3a2 319 RGETDALAG-VPKVRLFVMGIDEWR 342 (347)
T ss_dssp SCCTTTTTT-CCSEEEEEBTTTEEE
T ss_pred CCCCCCCCC-CCceEEEEcCCCeEE
Confidence 865432221 134556677765543
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.84 E-value=3.4e-20 Score=177.16 Aligned_cols=199 Identities=17% Similarity=0.214 Sum_probs=153.6
Q ss_pred eeEEEEEEEcCCCc-EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGH-VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 35 ~~~~~i~~~~~dG~-~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
+....+.+....+. ...+.+|+|... .+++.|+||++||++++...+..+++.|+++||.|+++|++|++....
T Consensus 21 ~~~~~~~~~~~~~~g~~~~~ly~P~~~-~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~---- 95 (260)
T d1jfra_ 21 YATSQTSVSSLVASGFGGGTIYYPTST-ADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD---- 95 (260)
T ss_dssp SCEEEEEECTTTCSSSCCEEEEEESCC-TTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH----
T ss_pred cceeEEEeccCCcCcccCEEEEEcCCC-CCCCccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCch----
Confidence 44445555433321 234678889752 345679999999999999999999999999999999999998765431
Q ss_pred CCcchHHHHHHHHHHHHhcCC------CCcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHHHHHHhhhC
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQ------TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRL 187 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~------~~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~ 187 (486)
....|+.++++++.+... ..+|+++|||+||.+++.++...++++++|.++++..
T Consensus 96 ---~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~~~~A~v~~~~~~~---------------- 156 (260)
T d1jfra_ 96 ---SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTGWNT---------------- 156 (260)
T ss_dssp ---HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCCS----------------
T ss_pred ---hhHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhccchhheeeecccc----------------
Confidence 225788889999887532 2789999999999999999999999999998887642
Q ss_pred CchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHH-HHHHHHHcC--CCcEEEEeCC-CC
Q 011425 188 PKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH-SDLIFNAYA--GDKNIIKFDG-DH 263 (486)
Q Consensus 188 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~l~~~l~--~~~~l~~~~g-gH 263 (486)
...+.++++|+|+++|++|.++|+.. .+.+++.+. ..+.++.++| +|
T Consensus 157 -----------------------------~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H 207 (260)
T d1jfra_ 157 -----------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASH 207 (260)
T ss_dssp -----------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCT
T ss_pred -----------------------------cccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCcc
Confidence 12334678999999999999999875 566666654 3567888887 99
Q ss_pred CCC--ChHHHHHHHHHHHHHhcCCC
Q 011425 264 NSS--RPQFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 264 ~~~--~p~~~~~~I~~FL~~~l~~~ 286 (486)
... ....+.+.++.||+.+|...
T Consensus 208 ~~~~~~~~~~~~~~~~wl~~~L~~d 232 (260)
T d1jfra_ 208 FTPNTSDTTIAKYSISWLKRFIDSD 232 (260)
T ss_dssp TGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCChHHHHHHHHHHHHHHhcCc
Confidence 865 34678888999999998764
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=1.3e-20 Score=169.72 Aligned_cols=174 Identities=14% Similarity=0.115 Sum_probs=122.9
Q ss_pred cEEEEeCCCCCChhh--HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 011425 67 PCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (486)
Q Consensus 67 p~VV~lHG~gg~~~~--~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhS 144 (486)
..||++||++++... +..+++.|+.+||.|+++|+||+|.+. .++....++.+... ...+++|+|||
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~----------~~~~~~~l~~~~~~-~~~~~~lvGhS 70 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR----------LEDWLDTLSLYQHT-LHENTYLVAHS 70 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCC----------HHHHHHHHHTTGGG-CCTTEEEEEET
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcch----------HHHHHHHHHHHHhc-cCCCcEEEEec
Confidence 479999999988655 667889999999999999999998653 34554544444433 23789999999
Q ss_pred chHHHHHHHHhcCCC---ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCC
Q 011425 145 MGAVTSLLYGAEDPS---IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP 221 (486)
Q Consensus 145 mGG~lAl~~A~~~p~---v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (486)
|||.+++.++..++. +.++++.+++.......... ..+.. .........
T Consensus 71 ~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------------------------~~~~~-~~~~~~~~~ 122 (186)
T d1uxoa_ 71 LGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQML---------------------------DEFTQ-GSFDHQKII 122 (186)
T ss_dssp THHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGG---------------------------GGGTC-SCCCHHHHH
T ss_pred hhhHHHHHHHHhCCccceeeEEeecccccccchhhhhh---------------------------hhhhc-ccccccccc
Confidence 999999999999986 56666666654321100000 00000 000111112
Q ss_pred CCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-----ChHHHHHHHHHHHHH
Q 011425 222 KTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-----RPQFYYDSVSIFFYN 281 (486)
Q Consensus 222 ~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-----~p~~~~~~I~~FL~~ 281 (486)
.+.+|+|+|||++|++||++.++.+++.++ .+++++++ ||+.. ...++.+.|.+||.+
T Consensus 123 ~~~~p~lvi~g~~D~~vp~~~~~~l~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 123 ESAKHRAVIASKDDQIVPFSFSKDLAQQID--AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp HHEEEEEEEEETTCSSSCHHHHHHHHHHTT--CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred cCCCCEEEEecCCCCCCCHHHHHHHHHHcC--CEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 345799999999999999999999999883 57888887 99754 225788888888863
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.82 E-value=1.1e-19 Score=170.60 Aligned_cols=199 Identities=19% Similarity=0.256 Sum_probs=147.6
Q ss_pred EEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCC-
Q 011425 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG- 115 (486)
Q Consensus 37 ~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~- 115 (486)
.+.|+|++.||..+.+++..|. +++.|+||++|+..|.......+++.|+++||.|+++|+.|.+..........
T Consensus 3 ~e~v~~~~~dg~~~~a~~~~P~----~~~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~ 78 (233)
T d1dina_ 3 TEGISIQSYDGHTFGALVGSPA----KAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDE 78 (233)
T ss_dssp CTTCCEECTTSCEECEEEECCS----SSSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSH
T ss_pred ceEEEEEcCCCCEEEEEEECCC----CCCceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHH
Confidence 3557899999999999999885 36789999999887776777788999999999999999977655443222111
Q ss_pred --------------c-chHHHHHHHHHHHHhcCCC-CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccCHHHHHHHH
Q 011425 116 --------------W-HEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLEL 179 (486)
Q Consensus 116 --------------~-~~~~Dl~~~i~~l~~~~~~-~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~~~~~~~~~ 179 (486)
. ....|+.++++++...... .+|+++|+|+||.+++.++...+ +.+.+...+....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~~-~~~~~~~~~~~~~------- 150 (233)
T d1dina_ 79 RQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY-VDRAVGYYGVGLE------- 150 (233)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHTC-SSEEEEESCSCGG-------
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeecccccc-cceeccccccccc-------
Confidence 0 1256888899999876433 68999999999999998886644 6665554332110
Q ss_pred HHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC--CCcEEE
Q 011425 180 VDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA--GDKNII 257 (486)
Q Consensus 180 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~--~~~~l~ 257 (486)
.....+.++++|+|+++|++|+.+|.+..+.+.+.+. ...+++
T Consensus 151 -----------------------------------~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~ 195 (233)
T d1dina_ 151 -----------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVH 195 (233)
T ss_dssp -----------------------------------GGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEE
T ss_pred -----------------------------------cchhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEE
Confidence 1123445688999999999999999999888887765 356889
Q ss_pred EeCC-CCCCCC----------hHHHHHHHHHHHHHh
Q 011425 258 KFDG-DHNSSR----------PQFYYDSVSIFFYNV 282 (486)
Q Consensus 258 ~~~g-gH~~~~----------p~~~~~~I~~FL~~~ 282 (486)
+|+| +|.+.. .+..++.+++||...
T Consensus 196 ~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~ 231 (233)
T d1dina_ 196 WYEEAGHSFARTSSSGYVASAAALANERTLDFLAPL 231 (233)
T ss_dssp EETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred EECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 9998 897541 134467788888753
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.82 E-value=4.1e-18 Score=173.05 Aligned_cols=252 Identities=15% Similarity=0.155 Sum_probs=175.9
Q ss_pred cceeEEEEEEEcC-----CCc--EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh------------------------
Q 011425 33 RSYKRQDLEIRNA-----RGH--VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD------------------------ 81 (486)
Q Consensus 33 ~~~~~~~i~~~~~-----dG~--~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~------------------------ 81 (486)
....++.+.+.+. ||. .|++.+|+|.. .++.|+|+..+.++.....
T Consensus 19 ~~~~re~v~v~~~~dt~rDG~~d~l~~di~rP~~---~~k~Pvil~~sPY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (405)
T d1lnsa3 19 SLLEREVLWVESPVDSEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHV 95 (405)
T ss_dssp GGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCC
T ss_pred CCceEeEEEEeCCCCCCCCCCEeEEEEEEEccCC---CCCceEEEEeCCcCCCCcccccccccccccccccccccccccc
Confidence 3345566666655 899 69999999973 4577999988887532111
Q ss_pred -----------------------------HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhc
Q 011425 82 -----------------------------ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGN 132 (486)
Q Consensus 82 -----------------------------~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~ 132 (486)
.....++|+++||.|+.+|.||.|.|+|.+...+..+.+|..++|+|+..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e~~D~~~~IeWl~~~ 175 (405)
T d1lnsa3 96 EQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGR 175 (405)
T ss_dssp CCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccccchHHHHhCCCEEEEECCCCCCCCCCccccCChhhhhhHHHHHHHHHhc
Confidence 012446799999999999999999999998777767789999999999764
Q ss_pred CC--------------C--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHH-----------------
Q 011425 133 KQ--------------T--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE----------------- 178 (486)
Q Consensus 133 ~~--------------~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~----------------- 178 (486)
.. . ++|+++|+|+||++++.+|+..|. ++++|..++..++.+....
T Consensus 176 ~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~ 255 (405)
T d1lnsa3 176 ARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDV 255 (405)
T ss_dssp SCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHH
T ss_pred ccccccccccccccccccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhh
Confidence 21 1 589999999999999999998876 9999999998887643211
Q ss_pred HHHHHh-hhCCchhHHHHHHHHHHHHhh--------hhc--ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHH
Q 011425 179 LVDVYK-IRLPKFTVKMAVQYMRRVIQK--------KAK--FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIF 247 (486)
Q Consensus 179 ~~~~~~-~~~p~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~ 247 (486)
...... ..................... ... ......+....+.+|++|+|+|+|..|..+++.++..++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y 335 (405)
T d1lnsa3 256 LAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFW 335 (405)
T ss_dssp HHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHH
T ss_pred hhccccccccccchhhhchhhhhhccchhhhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHH
Confidence 000000 000000000000000000000 000 011233566778899999999999999999999999999
Q ss_pred HHcC--CCcEEEEeCCCCCCC---ChHHHHHHHHHHHHHhcCCCC
Q 011425 248 NAYA--GDKNIIKFDGDHNSS---RPQFYYDSVSIFFYNVLHPPQ 287 (486)
Q Consensus 248 ~~l~--~~~~l~~~~ggH~~~---~p~~~~~~I~~FL~~~l~~~~ 287 (486)
+++. ..+.+++.+++|... ....+.+.+.+||+.+|+...
T Consensus 336 ~al~~~~~~~Lilgpw~H~~~~~~~~~d~~~~~~~wFD~~LkG~~ 380 (405)
T d1lnsa3 336 KALPEGHAKHAFLHRGAHIYMNSWQSIDFSETINAYFVAKLLDRD 380 (405)
T ss_dssp HHSCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHhCCCcEEEEeCCCCCCCcccccchHHHHHHHHHHHHhCCCC
Confidence 9875 346788888999865 235678899999999998653
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.81 E-value=7.5e-19 Score=177.10 Aligned_cols=272 Identities=14% Similarity=0.101 Sum_probs=171.9
Q ss_pred cceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh-------hH----HHHHHHhccCCeEEEEEcC
Q 011425 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-------DA----NEAAVILLPSNITLFTLDF 101 (486)
Q Consensus 33 ~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~-------~~----~~~~~~L~~~Gy~Vv~~D~ 101 (486)
..|.++++.++..||.+|.+.+|+|.+ .++.|+||+.|+++.... .. ....+.|+++||.|+++|.
T Consensus 20 ~~~~~~~v~i~~rDG~~L~~~v~~P~~---~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~ 96 (381)
T d1mpxa2 20 NDYIKREVMIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDV 96 (381)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEEC
T ss_pred cCceEEEEEEECCCCCEEEEEEEEeCC---CCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEec
Confidence 456778999999999999999999974 567899999999864211 11 2245778999999999999
Q ss_pred CCCCCCCCCCCCC----------CcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCC
Q 011425 102 SGSGLSDGDYVSL----------GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSA 168 (486)
Q Consensus 102 rG~G~S~~~~~~~----------~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp 168 (486)
||+|.|+|.+... ...++.|+.++|+|+.++... ++|+++|+|+||++++.+|...|. ++++|..++
T Consensus 97 RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~ 176 (381)
T d1mpxa2 97 RGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESP 176 (381)
T ss_dssp TTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESC
T ss_pred CccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeecc
Confidence 9999999865432 124589999999999888544 699999999999999999888876 999999888
Q ss_pred ccCHHH-------------HHHHHHHHHh-hhCCc-------hhHHHHHH-----------------HHHHHHhhhh---
Q 011425 169 FSDLFD-------------LMLELVDVYK-IRLPK-------FTVKMAVQ-----------------YMRRVIQKKA--- 207 (486)
Q Consensus 169 ~~~~~~-------------~~~~~~~~~~-~~~p~-------~~~~~~~~-----------------~~~~~~~~~~--- 207 (486)
..+... .+..+..... ...+. ........ ++...+....
T Consensus 177 ~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 256 (381)
T d1mpxa2 177 MIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDA 256 (381)
T ss_dssp CCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCH
T ss_pred ccccccccccccCchhhhccHHHHHhhhhhccccchhhhhhhhhHHHHHhcccccccchhhccccchHHHHHhhCCCccc
Confidence 665321 0000000000 00000 00000000 0011110000
Q ss_pred cccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHH--Hc---CCCcEEEEeCCCCCCC--------------C-
Q 011425 208 KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFN--AY---AGDKNIIKFDGDHNSS--------------R- 267 (486)
Q Consensus 208 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~--~l---~~~~~l~~~~ggH~~~--------------~- 267 (486)
.+............+|++|+|+++|..|..+.......... .. +..+.+++-+.+|... .
T Consensus 257 ~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~LviGPw~H~~~~~~~~~~~~~~~~~~~ 336 (381)
T d1mpxa2 257 FWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDKRNTLNYLVMGPWRHSQVNYDGSALGALNFEGDT 336 (381)
T ss_dssp HHHTTCHHHHHHTSCCCSCEEEEEETTCSSCSSHHHHHHHHHGGGCTTSSSEEEEEESCCTTGGGSCCSEETTEECSSCH
T ss_pred hhhhcCchhhhhhccccCceEEEeccccCCccccHHHHHHHHHHhccccCCceEEEecCcCCCCccCCCcCCccccccch
Confidence 00000111222445789999999999998766543333222 22 2467788888899632 1
Q ss_pred -hHHHHHHHHHHHHHhcCCCCCCCcccccccccccccccccCc
Q 011425 268 -PQFYYDSVSIFFYNVLHPPQIPSTHSIKAEKYYDLGALKFGA 309 (486)
Q Consensus 268 -p~~~~~~I~~FL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (486)
...+.+.+++||+.+|+..... . ......++.+|...|.+
T Consensus 337 ~~~~~~~~~l~wFD~~LKg~~~~-~-~~ppV~~~~~G~~~Wr~ 377 (381)
T d1mpxa2 337 ARQFRHDVLRPFFDQYLVDGAPK-A-DTPPVFIYNTGENHWDR 377 (381)
T ss_dssp HHHHHHHTHHHHHHHHHSTTCCC-C-CCCSEEEEETTTTEEEE
T ss_pred hhhhHHHHHHHHHHHHhCCCCCC-C-CCCCEEEEECCCCeEee
Confidence 1223455789999999864322 1 12445677888766543
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.79 E-value=1.2e-18 Score=176.22 Aligned_cols=120 Identities=12% Similarity=0.008 Sum_probs=97.6
Q ss_pred cCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCC------eEEEEEcCCCCCCCCCCCCCCCcc
Q 011425 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSN------ITLFTLDFSGSGLSDGDYVSLGWH 117 (486)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~G------y~Vv~~D~rG~G~S~~~~~~~~~~ 117 (486)
+.||..|++.+... .++..++|||+||++++...|..++..|++.| |+||++|+||||.|+......++.
T Consensus 88 ~i~G~~iHf~h~~~----~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y~ 163 (394)
T d1qo7a_ 88 EIEGLTIHFAALFS----EREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFG 163 (394)
T ss_dssp EETTEEEEEEEECC----SCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSSCCC
T ss_pred EECCEEEEEEEEec----cCCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCCccC
Confidence 34899999987644 34567899999999999999999999999887 999999999999998654433332
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCC
Q 011425 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSA 168 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp 168 (486)
..++...+..+....+..+.+++|||+||.++..++..+|+ +.+++++..
T Consensus 164 -~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~ 214 (394)
T d1qo7a_ 164 -LMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLC 214 (394)
T ss_dssp -HHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred -HHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeee
Confidence 45666666666666678899999999999999999998887 777777554
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.76 E-value=1e-17 Score=152.74 Aligned_cols=181 Identities=13% Similarity=0.099 Sum_probs=134.2
Q ss_pred EEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCC---CCCCCCc---c----hHHHHH
Q 011425 54 HYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDG---DYVSLGW---H----EKDDLK 123 (486)
Q Consensus 54 ~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~---~~~~~~~---~----~~~Dl~ 123 (486)
+|.|. .++++|+||++||++++...|..++..+.+ ++.|++++.+..+.... ....... . ..+++.
T Consensus 5 i~~~~---~~~~~P~vi~lHG~g~~~~~~~~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (202)
T d2h1ia1 5 VFQKG---KDTSKPVLLLLHGTGGNELDLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELN 80 (202)
T ss_dssp EEECC---SCTTSCEEEEECCTTCCTTTTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHH
T ss_pred cCCCC---CCCCCCEEEEECCCCCCHHHHHHHHHHhcc-CCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHH
Confidence 44553 346789999999999999999989888875 78999987654332211 1111111 1 134566
Q ss_pred HHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHH
Q 011425 124 VVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMR 200 (486)
Q Consensus 124 ~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 200 (486)
.+++++.+.... .+++++|+|+||.+++.++..+|+ +.++++.++....
T Consensus 81 ~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~---------------------------- 132 (202)
T d2h1ia1 81 EFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPR---------------------------- 132 (202)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC----------------------------
T ss_pred HHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCc----------------------------
Confidence 667777666554 699999999999999999999998 8999998876431
Q ss_pred HHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEeCCCCCCCChHHHHHHHHH
Q 011425 201 RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDGDHNSSRPQFYYDSVSI 277 (486)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~~ggH~~~~p~~~~~~I~~ 277 (486)
+.........+|++++||++|++||++.++++.+.+.. +.+++.+++||... .+..+.+.+
T Consensus 133 --------------~~~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ggH~~~--~~~~~~~~~ 196 (202)
T d2h1ia1 133 --------------RGMQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENRGHQLT--MGEVEKAKE 196 (202)
T ss_dssp --------------SSCCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSCC--HHHHHHHHH
T ss_pred --------------ccccccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCcCC--HHHHHHHHH
Confidence 11122334568999999999999999999999988753 56888899999754 566788999
Q ss_pred HHHHh
Q 011425 278 FFYNV 282 (486)
Q Consensus 278 FL~~~ 282 (486)
||++.
T Consensus 197 wl~k~ 201 (202)
T d2h1ia1 197 WYDKA 201 (202)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=2.5e-17 Score=153.83 Aligned_cols=183 Identities=20% Similarity=0.176 Sum_probs=126.7
Q ss_pred CCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCC---------CCCCCCC--CCc-ch-------HHHHH
Q 011425 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGL---------SDGDYVS--LGW-HE-------KDDLK 123 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~---------S~~~~~~--~~~-~~-------~~Dl~ 123 (486)
.+..++|||+||+|++..+|..++..+...++.+++++-|.+.. +-..... ... .. .+.+.
T Consensus 18 ~~~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~ 97 (229)
T d1fj2a_ 18 RKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIK 97 (229)
T ss_dssp SCCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHH
Confidence 35568999999999999999888888888899999988653211 1000000 000 11 22333
Q ss_pred HHHHHHHhc-CCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHH
Q 011425 124 VVVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRR 201 (486)
Q Consensus 124 ~~i~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 201 (486)
.+++...+. ...++|+|+|+||||.+|+.++..+|+ ++++|.+++...... ..+
T Consensus 98 ~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~-----------~~~------------- 153 (229)
T d1fj2a_ 98 ALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA-----------SFP------------- 153 (229)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG-----------GSC-------------
T ss_pred HHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccc-----------ccc-------------
Confidence 444444433 234799999999999999999999998 999999888643100 000
Q ss_pred HHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-----CCcEEEEeCC-CCCCCChHHHHHHH
Q 011425 202 VIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-----GDKNIIKFDG-DHNSSRPQFYYDSV 275 (486)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-----~~~~l~~~~g-gH~~~~p~~~~~~I 275 (486)
+........++|+|++||++|.+||++.+++.++.+. .+.++..+++ ||... .+..+.+
T Consensus 154 -------------~~~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~--~~~~~~~ 218 (229)
T d1fj2a_ 154 -------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC--QQEMMDV 218 (229)
T ss_dssp -------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC--HHHHHHH
T ss_pred -------------ccccccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC--HHHHHHH
Confidence 0001112346899999999999999998888777653 3568888998 99754 4456789
Q ss_pred HHHHHHhcC
Q 011425 276 SIFFYNVLH 284 (486)
Q Consensus 276 ~~FL~~~l~ 284 (486)
.+||+++|.
T Consensus 219 ~~wL~~~Lp 227 (229)
T d1fj2a_ 219 KQFIDKLLP 227 (229)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHhHCc
Confidence 999999984
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=3.6e-19 Score=166.11 Aligned_cols=99 Identities=11% Similarity=0.014 Sum_probs=80.2
Q ss_pred CcEEEEeCCCCCChhhHHHHHHHhccC--CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 66 LPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~~~~~~~~L~~~--Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
.|+|||+||++++...|..++..|.+. ||.|+++|+||||.|..... ...+++...+..+.+..+ ++++|+||
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~----~~~~~~~~~l~~~l~~l~-~~~~lvGh 76 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW----EQVQGFREAVVPIMAKAP-QGVHLICY 76 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH----HHHHHHHHHHHHHHHHCT-TCEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccc----cCHHHHHHHHHHHHhccC-CeEEEEcc
Confidence 456889999999999999999999764 79999999999999975421 224455555544444445 89999999
Q ss_pred cchHHHHHHHHhcCCC--ccEEEEcCCc
Q 011425 144 SMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~--v~~lVl~sp~ 169 (486)
||||.+|+.+|.++|+ |+++|+++++
T Consensus 77 S~GG~ia~~~a~~~p~~~v~~lvl~~~~ 104 (268)
T d1pjaa_ 77 SQGGLVCRALLSVMDDHNVDSFISLSSP 104 (268)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCC
T ss_pred ccHHHHHHHHHHHCCccccceEEEECCC
Confidence 9999999999999986 8999998864
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.74 E-value=2.1e-17 Score=166.58 Aligned_cols=137 Identities=19% Similarity=0.214 Sum_probs=110.7
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC------------hhhHHHHHHHhccCCeEEEEE
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC------------RADANEAAVILLPSNITLFTL 99 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~------------~~~~~~~~~~L~~~Gy~Vv~~ 99 (486)
...|.+++|.++..||++|.+.+|+|. +.++.|+||+.|+++.. ..........|+++||.|+.+
T Consensus 23 ~~~~~~~~v~ipmrDG~~L~~~v~~P~---~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~ 99 (385)
T d2b9va2 23 QRDYIKREVMVPMRDGVKLYTVIVIPK---NARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQ 99 (385)
T ss_dssp CCSEEEEEEEEECTTSCEEEEEEEEET---TCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred CCCCeEeEEEEECCCCCEEEEEEEEcC---CCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEE
Confidence 455788999999999999999999997 45688999999988521 111123456789999999999
Q ss_pred cCCCCCCCCCCCCCCC----------cchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEc
Q 011425 100 DFSGSGLSDGDYVSLG----------WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLD 166 (486)
Q Consensus 100 D~rG~G~S~~~~~~~~----------~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~ 166 (486)
|.||+|.|.+.+.... ..+++|..++|+|+.++... ++|+++|+|+||++++.+|...+. ++++|..
T Consensus 100 d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~ 179 (385)
T d2b9va2 100 DIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPE 179 (385)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred cCCcccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEe
Confidence 9999999998764332 24689999999999888544 799999999999999999988776 8888887
Q ss_pred CCccC
Q 011425 167 SAFSD 171 (486)
Q Consensus 167 sp~~~ 171 (486)
.+..+
T Consensus 180 ~~~~d 184 (385)
T d2b9va2 180 SPMVD 184 (385)
T ss_dssp EECCC
T ss_pred ccccc
Confidence 66543
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.74 E-value=6.4e-18 Score=163.20 Aligned_cols=210 Identities=14% Similarity=0.072 Sum_probs=136.5
Q ss_pred CCCCCcEEEEeCCC--CCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH-HHHHHHhcCCCCcE
Q 011425 62 EDTPLPCVVYCHGN--SGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRI 138 (486)
Q Consensus 62 ~~~~~p~VV~lHG~--gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~i 138 (486)
.....|.||++||+ +++...|..++..|.. ++.|+++|+||||.++..........++++.+ +++.++...+..++
T Consensus 56 ~~~~~~~l~c~~~~~~~g~~~~y~~la~~L~~-~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~P~ 134 (283)
T d2h7xa1 56 RAEGRAVLVGCTGTAANGGPHEFLRLSTSFQE-ERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPV 134 (283)
T ss_dssp --CCCCEEEEECCCCTTCSTTTTHHHHHTTTT-TCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCE
T ss_pred CCCCCceEEEeCCCCCCCCHHHHHHHHHhcCC-CceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcCCCce
Confidence 34567999999995 4677889999999987 69999999999998875443332233455444 45566666567899
Q ss_pred EEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccCHHHHH----H-HHHHHH-hhhCCchhHHHHHHHHHHHHhhhh
Q 011425 139 GLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLFDLM----L-ELVDVY-KIRLPKFTVKMAVQYMRRVIQKKA 207 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~~~~~~----~-~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~ 207 (486)
+|+||||||.+|+.+|.+.+ .|.++|++++........ . ...... ...........+.... ......
T Consensus 135 vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~-~~~~~~- 212 (283)
T d2h7xa1 135 VLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMG-RYARFL- 212 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHH-HHHHHH-
T ss_pred EEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHH-HHHHHH-
Confidence 99999999999999987643 389999988754321110 0 011111 0011111111111110 000000
Q ss_pred cccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC---ChHHHHHHHHHHHHHh
Q 011425 208 KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS---RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 208 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~---~p~~~~~~I~~FL~~~ 282 (486)
.......+++|+++++|++|..++......+.+.+....+++.++|+|+.+ .++.+++.|.+||+..
T Consensus 213 --------~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 213 --------AGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp --------HSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred --------hhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcCCCcccccCCHHHHHHHHHHHHHhc
Confidence 011245688999999999999998876666555566677899999999854 5789999999999863
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.73 E-value=2.8e-17 Score=149.97 Aligned_cols=176 Identities=17% Similarity=0.116 Sum_probs=127.9
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCC---CCCcch-------HHHHHHHHHHHHh
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV---SLGWHE-------KDDLKVVVSYLRG 131 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~---~~~~~~-------~~Dl~~~i~~l~~ 131 (486)
+.++.|+||++||++++...|..+++.++. ++.|++++.+..+....... ...... +..+...++....
T Consensus 13 ~~~~~P~vi~lHG~G~~~~~~~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 91 (203)
T d2r8ba1 13 GVAGAPLFVLLHGTGGDENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANRE 91 (203)
T ss_dssp CCTTSCEEEEECCTTCCHHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHhcc-CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhh
Confidence 556789999999999999999999988876 68888887765443321111 111111 2233333343334
Q ss_pred cCCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhccc
Q 011425 132 NKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFD 210 (486)
Q Consensus 132 ~~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 210 (486)
..+..+++++|+|+||.+++.++..+|. +.++|+.++....
T Consensus 92 ~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~-------------------------------------- 133 (203)
T d2r8ba1 92 HYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPF-------------------------------------- 133 (203)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCS--------------------------------------
T ss_pred cCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccc--------------------------------------
Confidence 4456899999999999999999999998 8999998876531
Q ss_pred ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCCCCCCCChHHHHHHHHHHHHHh
Q 011425 211 IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGDHNSSRPQFYYDSVSIFFYNV 282 (486)
Q Consensus 211 ~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~ggH~~~~p~~~~~~I~~FL~~~ 282 (486)
...........|++++||++|++||++.++++.+.+. .+++++++++||... .+..+.+.+||.++
T Consensus 134 ----~~~~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~ggH~~~--~~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 134 ----EPKISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIR--SGEIDAVRGFLAAY 202 (203)
T ss_dssp ----CCCCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCC--HHHHHHHHHHHGGG
T ss_pred ----ccccccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCcCC--HHHHHHHHHHHHhc
Confidence 0001122345799999999999999999999988874 356889999999854 44678899999764
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.73 E-value=6.9e-17 Score=153.37 Aligned_cols=245 Identities=13% Similarity=0.121 Sum_probs=151.8
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh---hHHHHHHHhccCCeEEEEEcCCCCCCCC---
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSGSGLSD--- 108 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~---~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~--- 108 (486)
|+.+.|.+++.||.+|.++++.|++...+++.|+||++||+++... ........+...++.++..++++.....
T Consensus 5 y~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (280)
T d1qfma2 5 YQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETW 84 (280)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHH
T ss_pred CEEEEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhh
Confidence 4567899999999999999999998766788999999999754322 1222333455557777777777654321
Q ss_pred --CCCCCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHH--
Q 011425 109 --GDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD-- 181 (486)
Q Consensus 109 --~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~-- 181 (486)
...........++...++.+....... ..++++|.|.||..+...+...+. +++++...+..+..........
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (280)
T d1qfma2 85 HKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHA 164 (280)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGG
T ss_pred hhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhcccccccc
Confidence 111111111234455555554444333 688999999999999999999988 6788887776653221100000
Q ss_pred -HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc----------
Q 011425 182 -VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---------- 250 (486)
Q Consensus 182 -~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l---------- 250 (486)
.......... ....... . .......+..........|+|++||+.|..||+.++.++++++
T Consensus 165 ~~~~~~~~~~~--~~~~~~~----~--~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~ 236 (280)
T d1qfma2 165 WTTDYGCSDSK--QHFEWLI----K--YSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQ 236 (280)
T ss_dssp GHHHHCCTTSH--HHHHHHH----H--HCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTC
T ss_pred ceecccCCCcc--ccccccc----c--cccccccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcC
Confidence 0000000000 0000000 0 0011111223333334458999999999999999999999987
Q ss_pred CCCcEEEEeCC-CCCCCCh-H---HHHHHHHHHHHHhcCCCC
Q 011425 251 AGDKNIIKFDG-DHNSSRP-Q---FYYDSVSIFFYNVLHPPQ 287 (486)
Q Consensus 251 ~~~~~l~~~~g-gH~~~~p-~---~~~~~I~~FL~~~l~~~~ 287 (486)
..+++++++++ ||.+..+ . +....+.+||+++|+...
T Consensus 237 ~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~~~ 278 (280)
T d1qfma2 237 NNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDW 278 (280)
T ss_dssp CSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34578999988 9976522 2 344567899999998643
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.72 E-value=1.4e-17 Score=153.66 Aligned_cols=199 Identities=10% Similarity=-0.010 Sum_probs=123.1
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~Lv 141 (486)
..+..++|||+||++++...|..++..|. +|.|+++|++|+|.+ ++++.+. +.+..+..+++|+
T Consensus 13 ~~~~~~~l~~lhg~~g~~~~~~~la~~L~--~~~v~~~~~~g~~~~-----------a~~~~~~---i~~~~~~~~~~lv 76 (230)
T d1jmkc_ 13 NQDQEQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEEEDR-----------LDRYADL---IQKLQPEGPLTLF 76 (230)
T ss_dssp STTCSEEEEEECCTTCCGGGGHHHHHHCT--TEEEEEECCCCSTTH-----------HHHHHHH---HHHHCCSSCEEEE
T ss_pred cCCCCCeEEEEcCCCCCHHHHHHHHHHCC--CCEEeccCcCCHHHH-----------HHHHHHH---HHHhCCCCcEEEE
Confidence 44678999999999999999999999995 699999999998732 4444444 4444456889999
Q ss_pred EEcchHHHHHHHHhcCCC----ccEEEEcCCccCH-----HH----HHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhc
Q 011425 142 GRSMGAVTSLLYGAEDPS----IAGMVLDSAFSDL-----FD----LMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK 208 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~----v~~lVl~sp~~~~-----~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 208 (486)
||||||.+|+.+|.+.|. +..++...+.... .. ........................+.........
T Consensus 77 GhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T d1jmkc_ 77 GYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYS 156 (230)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHH
T ss_pred eeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhccccccccccHHHHHHHHHHHHHHHH
Confidence 999999999999987653 5666655543210 00 0000011111111111111111111111111000
Q ss_pred ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC-C-h--HHHHHHHHHHHHH
Q 011425 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS-R-P--QFYYDSVSIFFYN 281 (486)
Q Consensus 209 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~-~-p--~~~~~~I~~FL~~ 281 (486)
..........+++|+++|+|++|..++.. .....+......+++.++|||+.+ . | +++.+.|.+||++
T Consensus 157 ----~~~~~~~~~~i~~p~l~i~g~~D~~~~~~-~~~w~~~~~~~~~~~~i~g~H~~ml~~~~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 157 ----YYVNLISTGQVKADIDLLTSGADFDIPEW-LASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp ----HHHHCCCCSCBSSEEEEEECSSCCCCCTT-EECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred ----hhhcccccccccCcceeeeecCCcccchh-HHHHHHhccCCcEEEEEcCCChhhcCCccHHHHHHHHHHHHhh
Confidence 00112344578899999999999998854 333344455677889999999866 2 2 5667777777754
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.69 E-value=4e-17 Score=146.60 Aligned_cols=167 Identities=16% Similarity=0.071 Sum_probs=125.6
Q ss_pred cEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcch
Q 011425 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (486)
Q Consensus 67 p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmG 146 (486)
|+|||+||++++...|..++..|.++||.|+.+|++|++.+.+... ...+++...++.+.+..+.++++|+|||||
T Consensus 3 ~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~----~~~~~l~~~i~~~~~~~~~~~v~lvGHSmG 78 (179)
T d1ispa_ 3 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY----NNGPVLSRFVQKVLDETGAKKVDIVAHSMG 78 (179)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH----HHHHHHHHHHHHHHHHHCCSCEEEEEETHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCccccccccc----hhhhhHHHHHHHHHHhcCCceEEEEeecCc
Confidence 4578899999999999999999999999999999999998865432 235677777877777767789999999999
Q ss_pred HHHHHHHHhcCC--C-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC
Q 011425 147 AVTSLLYGAEDP--S-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT 223 (486)
Q Consensus 147 G~lAl~~A~~~p--~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 223 (486)
|.++..++..++ + |+++|+++++..... . . .........
T Consensus 79 G~va~~~~~~~~~~~~V~~~V~l~~p~~g~~------------~-------------------~-------~l~~~~~~~ 120 (179)
T d1ispa_ 79 GANTLYYIKNLDGGNKVANVVTLGGANRLTT------------G-------------------K-------ALPGTDPNQ 120 (179)
T ss_dssp HHHHHHHHHHSSGGGTEEEEEEESCCGGGTC------------S-------------------B-------CCCCSCTTC
T ss_pred CHHHHHHHHHcCCchhhCEEEEECCCCCCch------------h-------------------h-------hcCCccccc
Confidence 999999998764 3 999999987642100 0 0 000112234
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCCC-ChHHHHHHHHHHHHH
Q 011425 224 FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQFYYDSVSIFFYN 281 (486)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~~-~p~~~~~~I~~FL~~ 281 (486)
.+|++.|+|..|.+|++..+ .+... +.+.+++ +|... ...++++.|.+||+.
T Consensus 121 ~~~~~~i~~~~D~~v~~~~~-----~l~~~-~~~~~~~~~H~~l~~~~~v~~~i~~~L~~ 174 (179)
T d1ispa_ 121 KILYTSIYSSADMIVMNYLS-----RLDGA-RNVQIHGVGHIGLLYSSQVNSLIKEGLNG 174 (179)
T ss_dssp CCEEEEEEETTCSSSCHHHH-----CCBTS-EEEEESSCCTGGGGGCHHHHHHHHHHHTT
T ss_pred CceEEEEEecCCcccCchhh-----cCCCc-eEEEECCCCchhhccCHHHHHHHHHHHhc
Confidence 58999999999999998743 34444 4455666 99855 445788888888864
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.69 E-value=1.4e-16 Score=146.32 Aligned_cols=173 Identities=12% Similarity=0.016 Sum_probs=121.3
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCC--CC-CCCCCCCCCc-------chHHHHHHHHHHHHh
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS--GL-SDGDYVSLGW-------HEKDDLKVVVSYLRG 131 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~--G~-S~~~~~~~~~-------~~~~Dl~~~i~~l~~ 131 (486)
+.+++|+||++||++++...|..+++.|.. ++.+++++.+.. |. .-......+. ..+.++.++|+.+.+
T Consensus 19 ~~~~~p~vv~lHG~g~~~~~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 97 (209)
T d3b5ea1 19 GKESRECLFLLHGSGVDETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAK 97 (209)
T ss_dssp TSSCCCEEEEECCTTBCTTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHhcc-CcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999998887 688888876521 10 0000001111 113455566666665
Q ss_pred cCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhc
Q 011425 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK 208 (486)
Q Consensus 132 ~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 208 (486)
+..+ ++|+|+||||||.+++.++..+|+ +.++|+++|....
T Consensus 98 ~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~------------------------------------ 141 (209)
T d3b5ea1 98 RHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVL------------------------------------ 141 (209)
T ss_dssp HHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCC------------------------------------
T ss_pred HhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccc------------------------------------
Confidence 5443 799999999999999999999998 9999999886431
Q ss_pred ccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc---CCCcEEEEeCCCCCCCChHHHHHHHHHHHH
Q 011425 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDGDHNSSRPQFYYDSVSIFFY 280 (486)
Q Consensus 209 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l---~~~~~l~~~~ggH~~~~p~~~~~~I~~FL~ 280 (486)
.........++|++++||+.|++++. .+.++.+.+ +..++++++++||... ++..+.+.+||.
T Consensus 142 ------~~~~~~~~~~~p~~~~~G~~D~~~~~-~~~~~~~~l~~~G~~v~~~~~~ggH~i~--~~~~~~~~~wl~ 207 (209)
T d3b5ea1 142 ------DHVPATDLAGIRTLIIAGAADETYGP-FVPALVTLLSRHGAEVDARIIPSGHDIG--DPDAAIVRQWLA 207 (209)
T ss_dssp ------SSCCCCCCTTCEEEEEEETTCTTTGG-GHHHHHHHHHHTTCEEEEEEESCCSCCC--HHHHHHHHHHHH
T ss_pred ------ccccccccccchheeeeccCCCccCH-HHHHHHHHHHHCCCCeEEEEECCCCCCC--HHHHHHHHHHhC
Confidence 01112234568999999999999974 344444443 3567889999999765 345567788885
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.69 E-value=9.8e-17 Score=152.97 Aligned_cols=193 Identities=13% Similarity=0.068 Sum_probs=134.8
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~ 114 (486)
.++.+-. +..-...+|.|. +.+.|+|||+||++ ++...+..++..|+++||.|+.+|||..+....
T Consensus 40 ~dv~Yg~--~~~~~lDiy~P~----~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~----- 108 (261)
T d2pbla1 40 LNLSYGE--GDRHKFDLFLPE----GTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRI----- 108 (261)
T ss_dssp EEEESSS--STTCEEEEECCS----SSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCH-----
T ss_pred CCcCCCC--CcCeEEEEeccC----CCCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccccC-----
Confidence 4555533 333344578885 35689999999964 556667678888999999999999996543321
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC-------CccEEEEcCCccCHHHHHHHHHHHHhhhC
Q 011425 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-------SIAGMVLDSAFSDLFDLMLELVDVYKIRL 187 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p-------~v~~lVl~sp~~~~~~~~~~~~~~~~~~~ 187 (486)
...++|+.++++|+.++. .++|+|+|||.||+++..++.... .+++++++++..++............
T Consensus 109 -p~~~~d~~~a~~~~~~~~-~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 183 (261)
T d2pbla1 109 -SEITQQISQAVTAAAKEI-DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEKF--- 183 (261)
T ss_dssp -HHHHHHHHHHHHHHHHHS-CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHHH---
T ss_pred -chhHHHHHHHHHHHHhcc-cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhhhcccc---
Confidence 123799999999999885 379999999999999987765532 27899999988765332111000000
Q ss_pred CchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCC-CCCC
Q 011425 188 PKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNS 265 (486)
Q Consensus 188 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~g-gH~~ 265 (486)
.. . .+ .....++...+.....|++++||+.|..++.++++.+++.+. .+.+.+++ +|+.
T Consensus 184 ~~-~----~~------------~~~~~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~--~~~~~~~~~~HF~ 243 (261)
T d2pbla1 184 KM-D----AD------------AAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD--ADHVIAFEKHHFN 243 (261)
T ss_dssp CC-C----HH------------HHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT--CEEEEETTCCTTT
T ss_pred cC-C----HH------------HHHHhCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhC--CCceEeCCCCchh
Confidence 00 0 00 001125556677788999999999999999999999999884 45677777 7864
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.67 E-value=3.1e-16 Score=148.09 Aligned_cols=194 Identities=16% Similarity=0.176 Sum_probs=122.9
Q ss_pred CCCCcEEEEeCCCC-----CChhhHH----HHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcC
Q 011425 63 DTPLPCVVYCHGNS-----GCRADAN----EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK 133 (486)
Q Consensus 63 ~~~~p~VV~lHG~g-----g~~~~~~----~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~ 133 (486)
.+++|+|||+||++ .+...+. .++..+++.||.|+++|||..+.... . ..++|+.++++|+.+..
T Consensus 28 ~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~-----~-~~~~d~~~~~~~l~~~~ 101 (263)
T d1vkha_ 28 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN-----P-RNLYDAVSNITRLVKEK 101 (263)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT-----T-HHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhh-----h-HHHHhhhhhhhcccccc
Confidence 46789999999964 2233333 34566778899999999996654321 1 23789999999999988
Q ss_pred CCCcEEEEEEcchHHHHHHHHhcCCC------------------ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 011425 134 QTSRIGLWGRSMGAVTSLLYGAEDPS------------------IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (486)
Q Consensus 134 ~~~~i~LvGhSmGG~lAl~~A~~~p~------------------v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (486)
+..+|+|+|||+||.+++.++...+. +.+++...+..++....... +..
T Consensus 102 ~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~----- 168 (263)
T d1vkha_ 102 GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEY--------PEY----- 168 (263)
T ss_dssp TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHC--------GGG-----
T ss_pred cccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhhhhc--------ccc-----
Confidence 88999999999999999998875432 34444555554433322110 000
Q ss_pred HHHHHHHHhhhhc-ccccc----cchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC-CCCCC
Q 011425 196 VQYMRRVIQKKAK-FDIMD----LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS 266 (486)
Q Consensus 196 ~~~~~~~~~~~~~-~~~~~----~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~~ 266 (486)
..++...+..... +.... ......+..+.+|+|++||++|++||++++..+++.+. .+.+++++++ +|...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~ 248 (263)
T d1vkha_ 169 DCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDV 248 (263)
T ss_dssp HHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGG
T ss_pred chhhhcccccccccccccccccCccccccccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCchhh
Confidence 0011111110000 00000 00112233456899999999999999999999998764 3678899997 79644
Q ss_pred -ChHHHHHHH
Q 011425 267 -RPQFYYDSV 275 (486)
Q Consensus 267 -~p~~~~~~I 275 (486)
..+++.+.|
T Consensus 249 ~~~~~~~~~i 258 (263)
T d1vkha_ 249 YKNGKVAKYI 258 (263)
T ss_dssp GGCHHHHHHH
T ss_pred hcChHHHHHH
Confidence 334444444
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=2.6e-16 Score=147.52 Aligned_cols=91 Identities=13% Similarity=0.076 Sum_probs=68.1
Q ss_pred CCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEE
Q 011425 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGh 143 (486)
+.+++|||+||++++...|..++..| ++.|+++|+||+|.+... -+.+...++.+++..+.++++|+||
T Consensus 23 ~~~~Pl~l~Hg~~gs~~~~~~l~~~L---~~~v~~~d~~g~~~~~~~--------~~~a~~~~~~~~~~~~~~~~~lvGh 91 (286)
T d1xkta_ 23 SSERPLFLVHPIEGSTTVFHSLASRL---SIPTYGLQCTRAAPLDSI--------HSLAAYYIDCIRQVQPEGPYRVAGY 91 (286)
T ss_dssp CCSCCEEEECCTTCCCGGGHHHHHTC---SSCEEEECCCTTSCCSCH--------HHHHHHHHHHHHHHCCSSCCEEEEE
T ss_pred CCCCeEEEECCCCccHHHHHHHHHHc---CCeEEEEeCCCCCCCCCH--------HHHHHHHHHHHHHhcCCCceEEeec
Confidence 45566899999999999999999887 578999999999987521 1223334455566656789999999
Q ss_pred cchHHHHHHHHhcCCC-ccEEEE
Q 011425 144 SMGAVTSLLYGAEDPS-IAGMVL 165 (486)
Q Consensus 144 SmGG~lAl~~A~~~p~-v~~lVl 165 (486)
||||.+|+.+|..+|+ +.++++
T Consensus 92 S~Gg~vA~~~A~~~p~~~~~v~~ 114 (286)
T d1xkta_ 92 SYGACVAFEMCSQLQAQQSPAPT 114 (286)
T ss_dssp THHHHHHHHHHHHHHHC------
T ss_pred CCccHHHHHHHHHHHHcCCCcee
Confidence 9999999999999886 555544
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.64 E-value=2.1e-15 Score=147.16 Aligned_cols=238 Identities=13% Similarity=0.103 Sum_probs=142.8
Q ss_pred eeEEEEEEEcCCCc-EEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGH-VLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 35 ~~~~~i~~~~~dG~-~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~ 109 (486)
...+++.+...+|. .|.+++|.|.+ ..++.|+||++||+| ++......++..++. .||.|+.+|||...+...
T Consensus 48 v~~~~~~~~~~~g~~~i~~~~~~P~~--~~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~ 125 (317)
T d1lzla_ 48 VSLRELSAPGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTF 125 (317)
T ss_dssp EEEEEEEECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCT
T ss_pred ceEEEEEEecCCCCceEEEEEECCCC--CCCCCcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccccc
Confidence 34578888888885 69999999975 345789999999975 455666666666654 599999999997654321
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcC---C--CCcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccCHHHHHHHH
Q 011425 110 DYVSLGWHEKDDLKVVVSYLRGNK---Q--TSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLFDLMLEL 179 (486)
Q Consensus 110 ~~~~~~~~~~~Dl~~~i~~l~~~~---~--~~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~~~~~~~~~ 179 (486)
...++|+.+++.|+.+.. + .++|+|+|+|.||++++.++...+ .....++..+...........
T Consensus 126 ------~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 199 (317)
T d1lzla_ 126 ------PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSM 199 (317)
T ss_dssp ------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHH
T ss_pred ------cccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccccccccccccccccccccc
Confidence 123688888888887652 2 268999999999999998876532 244444443332211000000
Q ss_pred HHHHhhhCCchhHHHHHHHHHHHHhhhhc-cccccc----chhhh-CCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC--
Q 011425 180 VDVYKIRLPKFTVKMAVQYMRRVIQKKAK-FDIMDL----NCLKL-APKTFIPALFGHASEDKFIRARHSDLIFNAYA-- 251 (486)
Q Consensus 180 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~-l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-- 251 (486)
.. + ...+.................... ...... ..... ......|++|++|+.|.+ ..++..+++++.
T Consensus 200 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~l--~~~~~~~~~~L~~~ 275 (317)
T d1lzla_ 200 TN-F-VDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPL--RDEGIEYALRLLQA 275 (317)
T ss_dssp HH-C-SSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTT--HHHHHHHHHHHHHT
T ss_pred cc-c-cccchhhhhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECCCCCC--HHHHHHHHHHHHHC
Confidence 00 0 011111111111111111111100 000000 11111 112236999999999965 556777777653
Q ss_pred -CCcEEEEeCC-CCCCC------ChHHHHHHHHHHHHHhcC
Q 011425 252 -GDKNIIKFDG-DHNSS------RPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 252 -~~~~l~~~~g-gH~~~------~p~~~~~~I~~FL~~~l~ 284 (486)
..++++++++ +|.+. ......+.+.+||.+.|+
T Consensus 276 G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr 316 (317)
T d1lzla_ 276 GVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 316 (317)
T ss_dssp TCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence 5788999998 89643 124566778899998875
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.63 E-value=2.1e-15 Score=146.31 Aligned_cols=235 Identities=14% Similarity=0.145 Sum_probs=141.0
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhccC-CeEEEEEcCCCCCCCCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVS 113 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~~-Gy~Vv~~D~rG~G~S~~~~~~ 113 (486)
+++++.. +|..|.+.+|.|.+ ..++.|+||++||++ ++...+..++..++.+ ++.|+.+|||.......
T Consensus 47 ~~~~~~~-~g~~i~~~~y~P~~--~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~---- 119 (308)
T d1u4na_ 47 REFDMDL-PGRTLKVRMYRPEG--VEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKF---- 119 (308)
T ss_dssp EEEEEEE-TTEEEEEEEEECTT--CCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT----
T ss_pred EEEEEec-CCceEEEEEEeccc--cCCCCCEEEEEecCeeeeeccccccchhhhhhhccccccccccccccccccc----
Confidence 4555553 78999999999975 335789999999985 4555666676676666 46788999985443221
Q ss_pred CCcchHHHHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHhcCC-----CccEEEEcCCccCHHHHHHHHHHHH
Q 011425 114 LGWHEKDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLFDLMLELVDVY 183 (486)
Q Consensus 114 ~~~~~~~Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~~~p-----~v~~lVl~sp~~~~~~~~~~~~~~~ 183 (486)
....+|+..++.|+.++.. .++|+++|+|.||.+++.++.... .+.+.+++.+...............
T Consensus 120 --p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (308)
T d1u4na_ 120 --PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEE 197 (308)
T ss_dssp --THHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHHHH
T ss_pred --ccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchhhh
Confidence 1237899999999987643 268999999999999988776532 2566666665543211100000000
Q ss_pred hhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEe
Q 011425 184 KIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKF 259 (486)
Q Consensus 184 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~ 259 (486)
........................................ ..|+|+++|+.|.++ .++..+++++. ..++++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~~D~l~--~~~~~~~~~L~~~G~~v~~~~~ 275 (308)
T d1u4na_ 198 NAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENF 275 (308)
T ss_dssp TSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccccccccchhhhhhhhcccCccccccchhhhhhhchhhcCCCCeeEEecCcCCch--HHHHHHHHHHHHCCCCEEEEEE
Confidence 1111111111111111111111111111011111111111 248999999999765 46677777653 47889999
Q ss_pred CC-CCCCC-------ChHHHHHHHHHHHHHhc
Q 011425 260 DG-DHNSS-------RPQFYYDSVSIFFYNVL 283 (486)
Q Consensus 260 ~g-gH~~~-------~p~~~~~~I~~FL~~~l 283 (486)
+| +|.+. ...+..+.+.+||++.|
T Consensus 276 ~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 276 EDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp EEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 98 89643 23477788899998875
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.63 E-value=6.6e-15 Score=146.52 Aligned_cols=241 Identities=13% Similarity=0.028 Sum_probs=147.9
Q ss_pred eeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCC---Ch--hhHHHHHHHhccCCeEEEEEcCCCCCCCCC
Q 011425 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG---CR--ADANEAAVILLPSNITLFTLDFSGSGLSDG 109 (486)
Q Consensus 35 ~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~--~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~ 109 (486)
...++..+.+.||..|.+.+|.|.+ ..++.|+||++||+|- +. ..+..++..++..|+.|+.+|||..+....
T Consensus 77 v~~~~~~i~~~dg~~i~~~iy~P~~--~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~p 154 (358)
T d1jkma_ 77 VETSTETILGVDGNEITLHVFRPAG--VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEG 154 (358)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETT--CCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTE
T ss_pred ccEEEEEEeCCCCCEEEEEEEecCC--CCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccc
Confidence 3557778889999999999999985 3457899999999853 22 234567788889999999999997643321
Q ss_pred CCCCCCcchHHHHHHHHHHHHhc---CCCCcEEEEEEcchHHHHHHHHhc---CC---CccEEEEcCCccCHHH------
Q 011425 110 DYVSLGWHEKDDLKVVVSYLRGN---KQTSRIGLWGRSMGAVTSLLYGAE---DP---SIAGMVLDSAFSDLFD------ 174 (486)
Q Consensus 110 ~~~~~~~~~~~Dl~~~i~~l~~~---~~~~~i~LvGhSmGG~lAl~~A~~---~p---~v~~lVl~sp~~~~~~------ 174 (486)
... + ...++|+.+++.|+.+. .+.++|+|+|+|.||++++.++.. .. .+.++++..|......
T Consensus 155 e~~-~-p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 232 (358)
T d1jkma_ 155 HHP-F-PSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHER 232 (358)
T ss_dssp ECC-T-THHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHH
T ss_pred cCC-C-chhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccchh
Confidence 111 1 12379999999999864 234799999999999999877643 21 2788998888654211
Q ss_pred HHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch----hhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHc
Q 011425 175 LMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC----LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (486)
Q Consensus 175 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l 250 (486)
....................+..+.................. .... .--.|+||++|+.|.+. .++..+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~-~~lPp~li~~g~~D~l~--~e~~~~~~~L 309 (358)
T d1jkma_ 233 RLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDEL-RGLPPFVVAVNELDPLR--DEGIAFARRL 309 (358)
T ss_dssp HHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHH-TTCCCEEEEEETTCTTH--HHHHHHHHHH
T ss_pred hcccccchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhc-cCCCCEEEEECCCCCCH--HHHHHHHHHH
Confidence 111100111111111112222222222111111100000000 0011 11249999999999764 4666776665
Q ss_pred C---CCcEEEEeCC-CCCCC------C---hHHHHHHHHHHHHHh
Q 011425 251 A---GDKNIIKFDG-DHNSS------R---PQFYYDSVSIFFYNV 282 (486)
Q Consensus 251 ~---~~~~l~~~~g-gH~~~------~---p~~~~~~I~~FL~~~ 282 (486)
. ..+++++++| +|.+. . .+++.+.|..|+.+.
T Consensus 310 ~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 310 ARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp HHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 3 5688999998 89632 1 245677788888764
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.63 E-value=9e-15 Score=134.94 Aligned_cols=181 Identities=18% Similarity=0.178 Sum_probs=117.6
Q ss_pred CCCCCcEEEEeCCCCCChhhHHHHHHHhccC--CeEEEEEcCCCC------CCCCCCC------CCCCcchHHHH-----
Q 011425 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGS------GLSDGDY------VSLGWHEKDDL----- 122 (486)
Q Consensus 62 ~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~--Gy~Vv~~D~rG~------G~S~~~~------~~~~~~~~~Dl----- 122 (486)
.++..++|||+||+|++...+..++..|... ++.+++++.|.. |...... ........+++
T Consensus 10 ~~~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 89 (218)
T d1auoa_ 10 AKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAK 89 (218)
T ss_dssp SSCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHH
T ss_pred CCCCCeEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHH
Confidence 3356789999999999999998888877654 567777665421 1000000 00000112222
Q ss_pred --HHHHHHHHhc-CCCCcEEEEEEcchHHHHHHHHhcC-CC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHH
Q 011425 123 --KVVVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQ 197 (486)
Q Consensus 123 --~~~i~~l~~~-~~~~~i~LvGhSmGG~lAl~~A~~~-p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 197 (486)
..+++...+. .+.++++++|+||||.+++.++... +. +.++|.++++..... ....
T Consensus 90 ~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~----------~~~~--------- 150 (218)
T d1auoa_ 90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG----------DELE--------- 150 (218)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC----------TTCC---------
T ss_pred HHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccc----------cccc---------
Confidence 2223322221 2347999999999999999887654 43 899999887643100 0000
Q ss_pred HHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCCCCCCCChHHHHHH
Q 011425 198 YMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGDHNSSRPQFYYDS 274 (486)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~ggH~~~~p~~~~~~ 274 (486)
......++|+|++||++|.+||++.++++++.+. .+++++.+++||... ++..+.
T Consensus 151 --------------------~~~~~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~gH~i~--~~~~~~ 208 (218)
T d1auoa_ 151 --------------------LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVL--PQEIHD 208 (218)
T ss_dssp --------------------CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCC--HHHHHH
T ss_pred --------------------cchhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCccC--HHHHHH
Confidence 0000124799999999999999999999888765 357888999999764 456788
Q ss_pred HHHHHHHhc
Q 011425 275 VSIFFYNVL 283 (486)
Q Consensus 275 I~~FL~~~l 283 (486)
+.+||.+.|
T Consensus 209 i~~wl~~~l 217 (218)
T d1auoa_ 209 IGAWLAARL 217 (218)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998876
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.61 E-value=3.4e-15 Score=145.65 Aligned_cols=229 Identities=14% Similarity=0.158 Sum_probs=140.3
Q ss_pred eEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHHHHhcc-CCeEEEEEcCCCCCCCCCCC
Q 011425 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 36 ~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~~~L~~-~Gy~Vv~~D~rG~G~S~~~~ 111 (486)
..+++.+...+| .|.+.+|.|. ++.|+||++||+| ++...+..++..++. .|+.|+.+|||......
T Consensus 55 ~~~~~~i~~~~g-~i~~~iy~P~-----~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~--- 125 (311)
T d1jjia_ 55 RVEDRTIKGRNG-DIRVRVYQQK-----PDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK--- 125 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESS-----SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC---
T ss_pred eEEEEEEeCCCC-cEEEEEEcCC-----CCceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccc---
Confidence 345677877777 7899999985 3569999999985 455555666666644 59999999999543221
Q ss_pred CCCCcchHHHHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHhc-----CCCccEEEEcCCccCHHHHHHHHHH
Q 011425 112 VSLGWHEKDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAE-----DPSIAGMVLDSAFSDLFDLMLELVD 181 (486)
Q Consensus 112 ~~~~~~~~~Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~~-----~p~v~~lVl~sp~~~~~~~~~~~~~ 181 (486)
.. ..++|+..++.|+.+... .++|+|+|+|.||.+++.++.. .+.+.+.+++.|..+..........
T Consensus 126 ~p---~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 202 (311)
T d1jjia_ 126 FP---AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLE 202 (311)
T ss_dssp TT---HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHH
T ss_pred cc---hhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCcccccc
Confidence 11 236889999999987532 2689999999999998877643 2237888898887753221111111
Q ss_pred HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEE
Q 011425 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIK 258 (486)
Q Consensus 182 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~ 258 (486)
+...............................++.........|++|++|+.|.++ .++..+++++. ..+++++
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~l~--d~~~~~~~~L~~~Gv~v~~~~ 279 (311)
T d1jjia_ 203 -FGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLR--DEGEVFGQMLRRAGVEASIVR 279 (311)
T ss_dssp -TSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEE
T ss_pred -cccccccccHHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcCCCCCh--HHHHHHHHHHHHCCCCEEEEE
Confidence 11111111111111111111111111111111233322233469999999999764 45666766653 5688999
Q ss_pred eCC-CCCCC-------ChHHHHHHHHHHH
Q 011425 259 FDG-DHNSS-------RPQFYYDSVSIFF 279 (486)
Q Consensus 259 ~~g-gH~~~-------~p~~~~~~I~~FL 279 (486)
++| +|.+. ...++.+.|.+||
T Consensus 280 ~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 280 YRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp EEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred ECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 998 89643 2346677777776
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.58 E-value=7.9e-17 Score=155.34 Aligned_cols=223 Identities=11% Similarity=-0.002 Sum_probs=122.8
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH-------HHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-------AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL 122 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~-------~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl 122 (486)
+.+..+.|.. +.+++|||+||++.+...|.. ++..++++||.|+++|+||||.|...... .+.
T Consensus 46 ~~v~~~~p~~----~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~------~~~ 115 (318)
T d1qlwa_ 46 MYVRYQIPQR----AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISA------INA 115 (318)
T ss_dssp EEEEEEEETT----CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHH------HHH
T ss_pred EEEEEECCCC----CCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCcccc------CCH
Confidence 4445566742 345558889999999888753 57889999999999999999999754321 122
Q ss_pred HHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHhcCCC--ccEEEEcCCcc---------CH-HHHHHHHHHHHhh
Q 011425 123 KVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFS---------DL-FDLMLELVDVYKI 185 (486)
Q Consensus 123 ~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~~~p~--v~~lVl~sp~~---------~~-~~~~~~~~~~~~~ 185 (486)
....+++..... ..+++++||||||.++..++..... ...+++.++.. .. .............
T Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (318)
T d1qlwa_ 116 VKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDG 195 (318)
T ss_dssp HHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhhcc
Confidence 222222222111 2456778999999998887766543 11111111111 00 0111111111100
Q ss_pred h-C-CchhHHHHHHHHHHHHhhhhc----c-cccccchhhhCCCCCCCEEEEEeCCCCCCCHH-----HHHHHHH---Hc
Q 011425 186 R-L-PKFTVKMAVQYMRRVIQKKAK----F-DIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-----HSDLIFN---AY 250 (486)
Q Consensus 186 ~-~-p~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-----~~~~l~~---~l 250 (486)
. . ..................... . ..........+..+++|+|+++|++|.++|.. .+..+.+ ..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~ 275 (318)
T d1qlwa_ 196 TVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAA 275 (318)
T ss_dssp EEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHT
T ss_pred ccchhhhcccchhhhhhhhhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHh
Confidence 0 0 000000000000000000000 0 00111334455678899999999999999843 3333333 33
Q ss_pred CCCcEEEEeC-----C-CCCCC---ChHHHHHHHHHHHHHh
Q 011425 251 AGDKNIIKFD-----G-DHNSS---RPQFYYDSVSIFFYNV 282 (486)
Q Consensus 251 ~~~~~l~~~~-----g-gH~~~---~p~~~~~~I~~FL~~~ 282 (486)
..+.+++.++ | ||+.+ ..+++++.|.+||+++
T Consensus 276 g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 276 GGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp TCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhc
Confidence 4567777764 4 79965 3589999999999986
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.57 E-value=7.4e-14 Score=137.91 Aligned_cols=231 Identities=12% Similarity=0.071 Sum_probs=145.4
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH---------HHHH---HHhccCCeEEEEEcCCCCCCCCCCCCC--
Q 011425 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA---------NEAA---VILLPSNITLFTLDFSGSGLSDGDYVS-- 113 (486)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~---------~~~~---~~L~~~Gy~Vv~~D~rG~G~S~~~~~~-- 113 (486)
.+|.|..|--. .....++||++|++.++...+ ..++ ..+-...|-||++|+.|.|.++..+..
T Consensus 24 ~~laY~t~G~l---n~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~ 100 (357)
T d2b61a1 24 INVAYQTYGTL---NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSIN 100 (357)
T ss_dssp EEEEEEEESCC---CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBC
T ss_pred ceEEEEeeccc---CCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCC
Confidence 46677777321 223458999999999875532 2221 233335699999999998764322211
Q ss_pred ----------CCcchHHHHHHHHHHHHhcCCCCcE-EEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC--HHHHH-HH
Q 011425 114 ----------LGWHEKDDLKVVVSYLRGNKQTSRI-GLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD--LFDLM-LE 178 (486)
Q Consensus 114 ----------~~~~~~~Dl~~~i~~l~~~~~~~~i-~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~--~~~~~-~~ 178 (486)
+....+.|+..+...|.+.+++.++ .|+|.||||+.|+.+|..+|+ |..+|.+++... ..... ..
T Consensus 101 p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~ 180 (357)
T d2b61a1 101 PQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNH 180 (357)
T ss_dssp TTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHH
T ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHH
Confidence 1122378888888888888899998 678999999999999999999 898888876542 21111 11
Q ss_pred HHHHHhhh-------------CCchhH--------------------------------------HHHHHHHHHHHhhh-
Q 011425 179 LVDVYKIR-------------LPKFTV--------------------------------------KMAVQYMRRVIQKK- 206 (486)
Q Consensus 179 ~~~~~~~~-------------~p~~~~--------------------------------------~~~~~~~~~~~~~~- 206 (486)
........ .|...+ .....+....+..+
T Consensus 181 ~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rf 260 (357)
T d2b61a1 181 VMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERF 260 (357)
T ss_dssp HHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhC
Confidence 11100000 011111 00000000000000
Q ss_pred ------------hcccc--cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCC--CCCCC-
Q 011425 207 ------------AKFDI--MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG--DHNSS- 266 (486)
Q Consensus 207 ------------~~~~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~g--gH~~~- 266 (486)
..++. ...+....+.+|++|+|+|..+.|..+|++..+.+++.++ .+.+++.+++ ||...
T Consensus 261 Dan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL 340 (357)
T d2b61a1 261 DANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFL 340 (357)
T ss_dssp CHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHH
T ss_pred CHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccC
Confidence 00000 0113445578999999999999999999999999888875 3467888887 88643
Q ss_pred -ChHHHHHHHHHHHHH
Q 011425 267 -RPQFYYDSVSIFFYN 281 (486)
Q Consensus 267 -~p~~~~~~I~~FL~~ 281 (486)
+.+++.+.|.+||..
T Consensus 341 ~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 341 VDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHcc
Confidence 788899999999874
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.55 E-value=9.9e-14 Score=137.24 Aligned_cols=232 Identities=13% Similarity=0.144 Sum_probs=148.2
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh------------H-HHHH---HHhccCCeEEEEEcCCCCCCCCCC
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD------------A-NEAA---VILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~------------~-~~~~---~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
..+|.|..|--. .....++||++|++.|+... | ..++ ..+-...|-||++|+.|.|.++..
T Consensus 26 ~~~l~Y~t~G~l---n~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~ 102 (362)
T d2pl5a1 26 PVVIAYETYGTL---SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSG 102 (362)
T ss_dssp SEEEEEEEEECC---CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSS
T ss_pred CceEEEEeeecc---CCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccC
Confidence 356677777422 22345899999999887421 2 2221 234445699999999998876432
Q ss_pred CCC------------CCcchHHHHHHHHHHHHhcCCCCcEE-EEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH--
Q 011425 111 YVS------------LGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-- 174 (486)
Q Consensus 111 ~~~------------~~~~~~~Dl~~~i~~l~~~~~~~~i~-LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~-- 174 (486)
+.. +....+.|+.++...|.+.++++++. |+|.||||+.|+.+|..+|+ |+.+|.+++......
T Consensus 103 ~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~ 182 (362)
T d2pl5a1 103 PLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQ 182 (362)
T ss_dssp TTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHH
T ss_pred ccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHH
Confidence 111 11123788888888888888998877 88999999999999999999 999999887553221
Q ss_pred -HHHHHHHHHhhh------------CCchhHHHHHH----------HHHHHHhhhh--------cccc---c--------
Q 011425 175 -LMLELVDVYKIR------------LPKFTVKMAVQ----------YMRRVIQKKA--------KFDI---M-------- 212 (486)
Q Consensus 175 -~~~~~~~~~~~~------------~p~~~~~~~~~----------~~~~~~~~~~--------~~~~---~-------- 212 (486)
.+.......... .|...+..... .+...+.... .+.. .
T Consensus 183 ~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~ 262 (362)
T d2pl5a1 183 IAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFV 262 (362)
T ss_dssp HHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSS
T ss_pred HHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHH
Confidence 111111111101 11111111111 1111111100 0000 0
Q ss_pred ----------------------ccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC---CcEEEEeCC--CCCC
Q 011425 213 ----------------------DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDG--DHNS 265 (486)
Q Consensus 213 ----------------------~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~l~~~~g--gH~~ 265 (486)
..+....+.+|++|+|+|..+.|.++|++..+.+++.+++ .++++.++. ||..
T Consensus 263 ~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHda 342 (362)
T d2pl5a1 263 DRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDS 342 (362)
T ss_dssp SCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGG
T ss_pred hcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcch
Confidence 0012344788999999999999999999999999998863 457788886 9974
Q ss_pred C--ChHHHHHHHHHHHHH
Q 011425 266 S--RPQFYYDSVSIFFYN 281 (486)
Q Consensus 266 ~--~p~~~~~~I~~FL~~ 281 (486)
. +.+++.+.|.+||++
T Consensus 343 FL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 343 FLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp GGSCCHHHHHHHHHHHHC
T ss_pred hccCHHHHHHHHHHHHcC
Confidence 3 788999999999973
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.54 E-value=1.1e-13 Score=137.47 Aligned_cols=236 Identities=15% Similarity=0.092 Sum_probs=147.0
Q ss_pred EEcCCCc-----EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhh--HH-HHH---HHhccCCeEEEEEcCCCCCCCCCC
Q 011425 42 IRNARGH-----VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--AN-EAA---VILLPSNITLFTLDFSGSGLSDGD 110 (486)
Q Consensus 42 ~~~~dG~-----~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~--~~-~~~---~~L~~~Gy~Vv~~D~rG~G~S~~~ 110 (486)
|....|. +|.|..|-- ......++||++|++.++... |+ .++ ..+-...|-||++|..|.|.++..
T Consensus 18 F~le~G~~l~~~~laY~t~G~---ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~ 94 (376)
T d2vata1 18 FTLESGVILRDVPVAYKSWGR---MNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAG 94 (376)
T ss_dssp EECTTSCEEEEEEEEEEEESC---CCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSS
T ss_pred EEeCCCCCcCCceEEEEeecc---cCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCC
Confidence 4455554 345555521 122456899999999887643 22 121 233335799999999998754321
Q ss_pred CCC--------------CCcchHHHHHHHHHHHHhcCCCCcE-EEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHH
Q 011425 111 YVS--------------LGWHEKDDLKVVVSYLRGNKQTSRI-GLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD 174 (486)
Q Consensus 111 ~~~--------------~~~~~~~Dl~~~i~~l~~~~~~~~i-~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~ 174 (486)
+.. +....+.|+..+...|.+.++++++ .|+|.||||+.|+.+|..+|+ |..+|.+++......
T Consensus 95 p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~ 174 (376)
T d2vata1 95 PCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSG 174 (376)
T ss_dssp TTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCH
T ss_pred CCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccch
Confidence 110 1112367888777788888899887 588999999999999999999 999988876553211
Q ss_pred --H-HHHHHHHHhhhC-------------Cc-------------------------------------------------
Q 011425 175 --L-MLELVDVYKIRL-------------PK------------------------------------------------- 189 (486)
Q Consensus 175 --~-~~~~~~~~~~~~-------------p~------------------------------------------------- 189 (486)
. +........... |.
T Consensus 175 ~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~ 254 (376)
T d2vata1 175 WCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTD 254 (376)
T ss_dssp HHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC------------------
T ss_pred HHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccc
Confidence 0 000000000000 00
Q ss_pred -----------hhHHHHHHHHHHHH-------------hhhhcccccc---cchhhhCCCCCCCEEEEEeCCCCCCCHHH
Q 011425 190 -----------FTVKMAVQYMRRVI-------------QKKAKFDIMD---LNCLKLAPKTFIPALFGHASEDKFIRARH 242 (486)
Q Consensus 190 -----------~~~~~~~~~~~~~~-------------~~~~~~~~~~---~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (486)
+.......+....+ .....++... -+....+.+|++|+|+|.+..|.++|++.
T Consensus 255 ~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~ 334 (376)
T d2vata1 255 SGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDE 334 (376)
T ss_dssp ---------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHH
T ss_pred cccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHH
Confidence 00000000000000 0001111111 13455688999999999999999999999
Q ss_pred HHHHHHHcCCCcEEEEeCC--CCCC--CChHHHHHHHHHHHHH
Q 011425 243 SDLIFNAYAGDKNIIKFDG--DHNS--SRPQFYYDSVSIFFYN 281 (486)
Q Consensus 243 ~~~l~~~l~~~~~l~~~~g--gH~~--~~p~~~~~~I~~FL~~ 281 (486)
.+++++.+++ .++++++. ||.. .+++.+...|..||++
T Consensus 335 ~~e~a~~l~~-a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 335 HVEMGRSIPN-SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHHHHHSTT-EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHhcCC-CeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 9999999864 67888885 8853 3788999999999864
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.52 E-value=6.9e-14 Score=132.33 Aligned_cols=199 Identities=13% Similarity=0.056 Sum_probs=126.8
Q ss_pred CCCcEEEEeCCC--CCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHH-HHHHHHhcCCCCcEEE
Q 011425 64 TPLPCVVYCHGN--SGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGL 140 (486)
Q Consensus 64 ~~~p~VV~lHG~--gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~-~i~~l~~~~~~~~i~L 140 (486)
+..|.|+++||+ +++...|..++..|.. .+.|+++|+||+|.++..+. +++++.+ .++.|++..+..+++|
T Consensus 40 ~~~~~l~c~~~~~~gg~~~~y~~La~~L~~-~~~V~al~~pG~~~~e~~~~-----s~~~~a~~~~~~i~~~~~~~P~~L 113 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPHEFTRLAGALRG-IAPVRAVPQPGYEEGEPLPS-----SMAAVAAVQADAVIRTQGDKPFVV 113 (255)
T ss_dssp SCSSEEEEECCCSSSCSGGGGHHHHHHHTT-TCCEEEECCTTSSTTCCEES-----SHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCCCeEEEECCCCCCCCHHHHHHHHHhcCC-CceEEEEeCCCcCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCEEE
Confidence 567899999984 5777889999999987 48999999999998754322 2344444 4566766666789999
Q ss_pred EEEcchHHHHHHHHhcCC----CccEEEEcCCccCHH-HHHHHHHHHHhhhCC-----chhHHHHHHHHHHHHhhhhccc
Q 011425 141 WGRSMGAVTSLLYGAEDP----SIAGMVLDSAFSDLF-DLMLELVDVYKIRLP-----KFTVKMAVQYMRRVIQKKAKFD 210 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~~p----~v~~lVl~sp~~~~~-~~~~~~~~~~~~~~p-----~~~~~~~~~~~~~~~~~~~~~~ 210 (486)
+||||||.+|+.+|.+.+ .|.++|++++..... ............... ......+..+ ...+.....
T Consensus 114 ~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~-~~~~~~~~~-- 190 (255)
T d1mo2a_ 114 AGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTAL-GAYDRLTGQ-- 190 (255)
T ss_dssp EECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHHHHHHHTTCC----CCCCHHHHHHH-HHHHHHHHH--
T ss_pred EEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhHHHHHHHHhhccccccCCHHHHHHH-HHHHHHHhc--
Confidence 999999999999987643 389999888755322 222222222111111 1111111111 111100011
Q ss_pred ccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCCcEEEEeCCCCCCC---ChHHHHHHHHHHHH
Q 011425 211 IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS---RPQFYYDSVSIFFY 280 (486)
Q Consensus 211 ~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~l~~~~ggH~~~---~p~~~~~~I~~FL~ 280 (486)
.....+.+|++++.+.+|....... ..........+++.++|+|+.+ .++.+.+.|.+||.
T Consensus 191 -------~~~~~~~~p~l~v~a~~~~~~~~~~--~w~~~~~~~~~~~~v~G~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 191 -------WRPRETGLPTLLVSAGEPMGPWPDD--SWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp -------CCCCCCCCCEEEEECCSSSSCCTTC--CCCCCCCSSCEEEECCSCCSSCSSCCHHHHHHHHHHHHT
T ss_pred -------CCCccccceEEEeecCCCCCcchhh--HHHHhCCCCcEEEEECCCCcccccccHHHHHHHHHHHhC
Confidence 1234678999999998886544321 1122233567899999999854 57888899999884
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.51 E-value=1e-13 Score=130.43 Aligned_cols=200 Identities=17% Similarity=0.171 Sum_probs=122.5
Q ss_pred EEEEEEc-CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHH-------HHHHHhccC----CeEEEEEcCCCCC
Q 011425 38 QDLEIRN-ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-------EAAVILLPS----NITLFTLDFSGSG 105 (486)
Q Consensus 38 ~~i~~~~-~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~-------~~~~~L~~~----Gy~Vv~~D~rG~G 105 (486)
+.++|.+ .+|..+.+.+|+|.+...+++.|+||++||.+++...|. .....+... .+.+...+..
T Consensus 23 ~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 99 (255)
T d1jjfa_ 23 VNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTN--- 99 (255)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCC---
T ss_pred EEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccc---
Confidence 5566654 579999999999998777778899999999987654431 122222221 2333333322
Q ss_pred CCCCCCCCCCc-chHHHHHHHHHHHHhcCC----CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHH
Q 011425 106 LSDGDYVSLGW-HEKDDLKVVVSYLRGNKQ----TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL 179 (486)
Q Consensus 106 ~S~~~~~~~~~-~~~~Dl~~~i~~l~~~~~----~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~ 179 (486)
........... .....+.+++.++.+... .++++++|+||||.+++.+|..+|+ +++++.+++..........
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~~- 178 (255)
T d1jjfa_ 100 AAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERL- 178 (255)
T ss_dssp CCCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHHH-
T ss_pred cccccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCcccccc-
Confidence 22111111110 113445566666666533 2679999999999999999999999 8999998887642110000
Q ss_pred HHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEE
Q 011425 180 VDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNI 256 (486)
Q Consensus 180 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l 256 (486)
.+ +..........|+++.+|+.|.+++. .+++++.+. -..++
T Consensus 179 -------~~--------------------------~~~~~~~~~~~~~~i~~G~~D~~~~~--~~~~~~~L~~~g~~~~~ 223 (255)
T d1jjfa_ 179 -------FP--------------------------DGGKAAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVY 223 (255)
T ss_dssp -------CT--------------------------TTTHHHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEE
T ss_pred -------cc--------------------------cHHHHhhccCCcceEEeCCCCCCchH--HHHHHHHHHHCCCCEEE
Confidence 00 00011112336899999999998764 455666553 46788
Q ss_pred EEeCC-CCCCCChHHHHHHHHHHH
Q 011425 257 IKFDG-DHNSSRPQFYYDSVSIFF 279 (486)
Q Consensus 257 ~~~~g-gH~~~~p~~~~~~I~~FL 279 (486)
..+++ ||... .+.+.+.+||
T Consensus 224 ~~~~~ggH~~~---~W~~~l~~fl 244 (255)
T d1jjfa_ 224 WLIQGGGHDFN---VWKPGLWNFL 244 (255)
T ss_dssp EEETTCCSSHH---HHHHHHHHHH
T ss_pred EEECCCCcCHH---HHHHHHHHHH
Confidence 88885 99743 2233444454
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.45 E-value=6e-14 Score=136.34 Aligned_cols=101 Identities=9% Similarity=-0.009 Sum_probs=84.5
Q ss_pred CCcEEEEeCCCCCChhh--HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 011425 65 PLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~--~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvG 142 (486)
..++|||+||++.+... |..++..|...||.|+.+|++|+|.++.. ...+++.+.|+++.+..+.++|.|+|
T Consensus 30 ~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~------~sae~la~~i~~v~~~~g~~kV~lVG 103 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ------VNTEYMVNAITALYAGSGNNKLPVLT 103 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH------HHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchH------hHHHHHHHHHHHHHHhccCCceEEEE
Confidence 44568899999987665 34588999999999999999999877521 23678999999998887789999999
Q ss_pred EcchHHHHHHHHhcCCC----ccEEEEcCCccC
Q 011425 143 RSMGAVTSLLYGAEDPS----IAGMVLDSAFSD 171 (486)
Q Consensus 143 hSmGG~lAl~~A~~~p~----v~~lVl~sp~~~ 171 (486)
|||||.++..++..+|+ |..+|.+++...
T Consensus 104 hS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 104 WSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp ETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred eCchHHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence 99999999999998874 899999888754
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.40 E-value=3.3e-13 Score=131.87 Aligned_cols=102 Identities=20% Similarity=0.207 Sum_probs=83.0
Q ss_pred CCcEEEEeCCCCCChhh------HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcE
Q 011425 65 PLPCVVYCHGNSGCRAD------ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRI 138 (486)
Q Consensus 65 ~~p~VV~lHG~gg~~~~------~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i 138 (486)
++.+|||+||++++... |..+...|.++||.|+++|+||+|.|+... ...+++.+.|+.+.+..+.++|
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~-----~~~~~l~~~i~~~~~~~~~~~v 81 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN-----GRGEQLLAYVKQVLAATGATKV 81 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT-----SHHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCc-----ccHHHHHHHHHHHHHHhCCCCE
Confidence 44457889999887543 667888999999999999999999887432 2256666666666666577999
Q ss_pred EEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 139 GLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 139 ~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
+|+||||||.++..++..+|+ |+.+|+++++..
T Consensus 82 ~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~ 115 (319)
T d1cvla_ 82 NLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHR 115 (319)
T ss_dssp EEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEEeccccHHHHHHHHHHCccccceEEEECCCCC
Confidence 999999999999999999998 999999988654
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.39 E-value=2.7e-13 Score=113.03 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=73.3
Q ss_pred EEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHH
Q 011425 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD 121 (486)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~D 121 (486)
|.+.+|.+|+|... +..|+|||+||.. ..| .+.| ..+|+|+++|+||||.|+..+ .. .++
T Consensus 5 ~~~~~G~~l~y~~~--------G~G~pvlllHG~~---~~w---~~~L-~~~yrvi~~DlpG~G~S~~p~--~s---~~~ 64 (122)
T d2dsta1 5 YLHLYGLNLVFDRV--------GKGPPVLLVAEEA---SRW---PEAL-PEGYAFYLLDLPGYGRTEGPR--MA---PEE 64 (122)
T ss_dssp EEEETTEEEEEEEE--------CCSSEEEEESSSG---GGC---CSCC-CTTSEEEEECCTTSTTCCCCC--CC---HHH
T ss_pred EEEECCEEEEEEEE--------cCCCcEEEEeccc---ccc---cccc-cCCeEEEEEeccccCCCCCcc--cc---cch
Confidence 45568999998876 4679999999853 223 2334 458999999999999998542 22 345
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCCC
Q 011425 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS 159 (486)
Q Consensus 122 l~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p~ 159 (486)
+.+.+..+.+..+.++.+|+||||||.+++.+++..+.
T Consensus 65 ~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 65 LAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred hHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 55555555555578999999999999999999987653
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.36 E-value=2.5e-11 Score=115.96 Aligned_cols=133 Identities=15% Similarity=0.100 Sum_probs=94.8
Q ss_pred CcceeEEEEEEEc-CCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCC--hhhHHH---HHHHhccCCeEEEEEcCCCCC
Q 011425 32 GRSYKRQDLEIRN-ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC--RADANE---AAVILLPSNITLFTLDFSGSG 105 (486)
Q Consensus 32 ~~~~~~~~i~~~~-~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~--~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G 105 (486)
|.+. +.+++.+ ..|..+.+.++.| .++.|+|+++||+++. ...|.. +.+.+.+.|+.|++++..+.+
T Consensus 6 ~~~v--~~~~~~s~~~~r~~~~~v~~p-----~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 78 (288)
T d1sfra_ 6 GLPV--EYLQVPSPSMGRDIKVQFQSG-----GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSS 78 (288)
T ss_dssp TCCC--EEEEEEETTTTEEEEEEEECC-----STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTC
T ss_pred CCEE--EEEEEECCCCCcEEEEEEeCC-----CCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCC
Confidence 4444 3455543 4788888777655 3689999999998764 333433 456777889999999987765
Q ss_pred CCCCCCCCC-------Cc-chHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 106 LSDGDYVSL-------GW-HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 106 ~S~~~~~~~-------~~-~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
......... .. .+...+.+++.+|.+++.. ++++|+|+||||++|+.++.++|+ +.+++.+++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~ 155 (288)
T d1sfra_ 79 FYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (288)
T ss_dssp TTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred CCccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccc
Confidence 443221110 11 1233467778888877655 689999999999999999999998 899999998765
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.34 E-value=2.6e-12 Score=121.12 Aligned_cols=198 Identities=12% Similarity=0.056 Sum_probs=124.8
Q ss_pred eeEEEEEEEcCCCc-EEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHH-HHHHhccCCeEEEEEcCCCCCCCCC---
Q 011425 35 YKRQDLEIRNARGH-VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-AAVILLPSNITLFTLDFSGSGLSDG--- 109 (486)
Q Consensus 35 ~~~~~i~~~~~dG~-~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~-~~~~L~~~Gy~Vv~~D~rG~G~S~~--- 109 (486)
+.-+.+.+.+.||. .+.+++++|.+...+++.|+|+++||.......... ........++.|+++++++...-..
T Consensus 11 ~~~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r 90 (265)
T d2gzsa1 11 YHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSR 90 (265)
T ss_dssp EEEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHH
T ss_pred ceeEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhhHHHHHHHHHHhcCCCeEEEecCCCCCcCccccc
Confidence 34477889999984 799999999987777788999999995322111111 2234456789999999887532110
Q ss_pred ------------------CCC-CCCc-ch--HHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCCccEEEE
Q 011425 110 ------------------DYV-SLGW-HE--KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVL 165 (486)
Q Consensus 110 ------------------~~~-~~~~-~~--~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl 165 (486)
... ..+. .. .....+++.++.+.+.. .+++|+|+||||++++.++...+.+.+++.
T Consensus 91 ~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~~~~f~~~~a 170 (265)
T d2gzsa1 91 AYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSSSYFRSYYS 170 (265)
T ss_dssp HHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHHCSSCSEEEE
T ss_pred ccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHcCcccCEEEE
Confidence 000 0000 00 11234456667666544 578999999999999998887777888888
Q ss_pred cCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCC--------CCC
Q 011425 166 DSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASE--------DKF 237 (486)
Q Consensus 166 ~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~--------D~~ 237 (486)
.+|....... .++... ...........|+++.+|.. |..
T Consensus 171 ~s~~~~~~~~---------------------~~~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~ 217 (265)
T d2gzsa1 171 ASPSLGRGYD---------------------ALLSRV------------TAVEPLQFCTKHLAIMEGSATQGDNRETHAV 217 (265)
T ss_dssp ESGGGSTTHH---------------------HHHHHH------------HTSCTTTTTTCEEEEEECCC-----------
T ss_pred ECCcccccch---------------------hhhhcc------------ccccccccCCCcEEEEcCCcccccccccccc
Confidence 8776532110 000000 01122334456788888876 666
Q ss_pred CCHHHHHHHHHHcC---CCcEEEEeCC-CCCC
Q 011425 238 IRARHSDLIFNAYA---GDKNIIKFDG-DHNS 265 (486)
Q Consensus 238 vp~~~~~~l~~~l~---~~~~l~~~~g-gH~~ 265 (486)
+++..++.+++.+. .+.++.+++| +|..
T Consensus 218 ~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~ 249 (265)
T d2gzsa1 218 GVLSKIHTTLTILKDKGVNAVFWDFPNLGHGP 249 (265)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHH
T ss_pred hhHHHHHHHHHHHHHCCCCEEEEEcCCCCcch
Confidence 77888888887764 4678999998 9964
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.32 E-value=4.4e-12 Score=118.55 Aligned_cols=198 Identities=9% Similarity=0.032 Sum_probs=116.2
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChh-hHHHHHHHhccCC----eEEEEEcCCCCCCCCCCC
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSN----ITLFTLDFSGSGLSDGDY 111 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~-~~~~~~~~L~~~G----y~Vv~~D~rG~G~S~~~~ 111 (486)
+.+.+.+. .|....+++|+|.+.+. .+.|+||++||.+.... .+...+..+...| +.++.++....+.-. ..
T Consensus 16 ~~~~~~S~~lg~~~~~~v~~P~~~~~-~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~-~~ 93 (246)
T d3c8da2 16 KEIIWKSERLKNSRRVWIFTTGDVTA-EERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRA-HE 93 (246)
T ss_dssp EEEEEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHH-HH
T ss_pred EEEEEECCCCCCEEEEEEEECCCCCC-CCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeecccccccccc-cc
Confidence 55666654 58899999999987654 56899999999642111 1223344554443 445555432211100 00
Q ss_pred CCCCcchHHH-HHHHHHHHHhcCC----CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCHHHHHHHHHHHHhh
Q 011425 112 VSLGWHEKDD-LKVVVSYLRGNKQ----TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKI 185 (486)
Q Consensus 112 ~~~~~~~~~D-l~~~i~~l~~~~~----~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~ 185 (486)
........+. ..+++.++..... .++++++|+||||+.++.++.++|+ +.+++.++|........ .
T Consensus 94 ~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~--------~ 165 (246)
T d3c8da2 94 LPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG--------G 165 (246)
T ss_dssp SSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT--------S
T ss_pred cCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCC--------c
Confidence 0011011111 2334444444332 2679999999999999999999998 99999999876421100 0
Q ss_pred hCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---CCcEEEEeCCC
Q 011425 186 RLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGD 262 (486)
Q Consensus 186 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~l~~~~gg 262 (486)
..+... ..............|+++++|..|..+ ...++.+++++. ..+.+++++||
T Consensus 166 ~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g~~~~~~~~~Gg 224 (246)
T d3c8da2 166 QQEGVL--------------------LEKLKAGEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDGG 224 (246)
T ss_dssp SSCCHH--------------------HHHHHTTSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESCC
T ss_pred cchHHH--------------------HHHhhhhhhhccCCCeEEEecCCCcch-hHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 000000 000122344566789999999999876 467788888865 46788889999
Q ss_pred CCCC
Q 011425 263 HNSS 266 (486)
Q Consensus 263 H~~~ 266 (486)
|...
T Consensus 225 H~~~ 228 (246)
T d3c8da2 225 HDAL 228 (246)
T ss_dssp SCHH
T ss_pred CChH
Confidence 9754
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.27 E-value=2.5e-12 Score=123.46 Aligned_cols=98 Identities=19% Similarity=0.130 Sum_probs=79.9
Q ss_pred CcEEEEeCCCCCChhh-----HHHHHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCCCCcEEE
Q 011425 66 LPCVVYCHGNSGCRAD-----ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGL 140 (486)
Q Consensus 66 ~p~VV~lHG~gg~~~~-----~~~~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~L 140 (486)
+-+|||+||+++.... |..+...|.+.||.|+++|++|+|.+. ...+++.+.|+.+.+..+.++++|
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~--------~~a~~l~~~i~~~~~~~g~~~v~l 78 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE--------VRGEQLLQQVEEIVALSGQPKVNL 78 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH--------HHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH--------HHHHHHHHHHHHHHHHcCCCeEEE
Confidence 3348999999876543 677889999999999999999988553 225566666666666667789999
Q ss_pred EEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 141 WGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 141 vGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
+||||||.++..++..+|+ |+++|.++++..
T Consensus 79 igHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~ 110 (285)
T d1ex9a_ 79 IGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEECccHHHHHHHHHHCCccceeEEEECCCCC
Confidence 9999999999999999998 999999887643
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.23 E-value=2e-10 Score=110.59 Aligned_cols=228 Identities=15% Similarity=0.155 Sum_probs=133.7
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCC-----CCCCCcEEEEeCCCCCChhhHHH---HHHHhccCCeEEEEEcCCCCCC--
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFP-----EDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGL-- 106 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~-----~~~~~p~VV~lHG~gg~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~-- 106 (486)
..+++.+. -|....+.+|+|++.. .+++.|+|+++||++++...|.. +...+.+.++.|+.++....+.
T Consensus 15 ~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~ 94 (299)
T d1pv1a_ 15 IKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEV 94 (299)
T ss_dssp EEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTS
T ss_pred EEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCccccccc
Confidence 34555544 6899999999998652 23468999999999999888754 2344555688999887533210
Q ss_pred ------------CCCCCCCC-------CcchHHH--HHHHHHHHHhcCCC---------CcEEEEEEcchHHHHHHHHhc
Q 011425 107 ------------SDGDYVSL-------GWHEKDD--LKVVVSYLRGNKQT---------SRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 107 ------------S~~~~~~~-------~~~~~~D--l~~~i~~l~~~~~~---------~~i~LvGhSmGG~lAl~~A~~ 156 (486)
....+... ... .++ +.+++.++.+.+.. ++.+|.|+||||+.|+.+|.+
T Consensus 95 ~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~-~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~ 173 (299)
T d1pv1a_ 95 ANDPEGSWDFGQGAGFYLNATQEPYAQHYQ-MYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLK 173 (299)
T ss_dssp CCCTTCCSSSSSSCCTTCBCCSHHHHTTCB-HHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHH
T ss_pred CCcccccccccCCCccccccccCCcccccc-hHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHH
Confidence 00000000 000 111 33455566554432 469999999999999999986
Q ss_pred C--CC-ccEEEEcCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch---hhhCCCC-CCCEEE
Q 011425 157 D--PS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC---LKLAPKT-FIPALF 229 (486)
Q Consensus 157 ~--p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~i-~~PvLi 229 (486)
+ |. +.+++..++............. ....+... .......++ .....+. ..++++
T Consensus 174 ~~~p~~f~~~~s~s~~~~~~~~~~~~~~-----------------~~~~~g~~-~~~~~~~~~~~l~~~~~~~~~~~i~~ 235 (299)
T d1pv1a_ 174 GYSGKRYKSCSAFAPIVNPSNVPWGQKA-----------------FKGYLGEE-KAQWEAYDPCLLIKNIRHVGDDRILI 235 (299)
T ss_dssp TGGGTCCSEEEEESCCCCSTTSHHHHHH-----------------HHHHSCC-----CGGGCHHHHGGGSCCCTTCCEEE
T ss_pred hcCCCceEEEeeccCcCCcccccchhhh-----------------hhhhcccc-hhhhhhcCHHHHHHHhhccCCcceeE
Confidence 5 55 7888888887653221110000 00000000 000011111 2223332 346788
Q ss_pred EEeCCCCCCCHH-HHHHHHHHcC-----CCcEEEEeCC-CCCCCChHHHHHHHHHHHHHhcC
Q 011425 230 GHASEDKFIRAR-HSDLIFNAYA-----GDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (486)
Q Consensus 230 i~G~~D~~vp~~-~~~~l~~~l~-----~~~~l~~~~g-gH~~~~p~~~~~~I~~FL~~~l~ 284 (486)
.+|.+|...+.. ..+.+.+.+. ...++...+| +|.....+.++...+.|+.+.|.
T Consensus 236 ~~G~~D~~~~~~~~~~~f~~~~~~~g~~~~~~~~~~~G~~Hsw~yW~~~i~~~l~f~a~~lg 297 (299)
T d1pv1a_ 236 HVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLG 297 (299)
T ss_dssp ECCTTCTTTTTTCCTHHHHHHHTTSTTTTSEEEECCTTCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCcchhhhhcHHHHHHHHHhcCCCcceEEEecCCCCcCHHHHHHHHHHHHHHHHHhcC
Confidence 889999887653 2344555443 2345666678 79866667778888889988764
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.17 E-value=2.1e-09 Score=101.45 Aligned_cols=127 Identities=13% Similarity=0.061 Sum_probs=86.2
Q ss_pred EEEEEEcC-CCcEEEEEEEecCCCCCCCCCcEEEEeCCCCC--ChhhHHH---HHHHhccCCeEEEEEcCCCCCC-CCCC
Q 011425 38 QDLEIRNA-RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG--CRADANE---AAVILLPSNITLFTLDFSGSGL-SDGD 110 (486)
Q Consensus 38 ~~i~~~~~-dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg--~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~-S~~~ 110 (486)
+.+++.++ .|..|...++.| ..|+|+++||.++ +...|.. +.+.+...++.||++|--..+. +...
T Consensus 5 e~~~v~s~~~~r~~~~~v~~~-------~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~ 77 (267)
T d1r88a_ 5 ENLMVPSPSMGRDIPVAFLAG-------GPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWE 77 (267)
T ss_dssp EEEEEEETTTTEEEEEEEECC-------SSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCS
T ss_pred EEEEEecccCCceeeEEEECC-------CCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCcccc
Confidence 44555544 677788776532 3489999999765 3445654 5567778899999998522111 1111
Q ss_pred CC-CCCcchHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccCH
Q 011425 111 YV-SLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (486)
Q Consensus 111 ~~-~~~~~~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~~ 172 (486)
.. ...+ +.--..+++.+|.+.+.. +++.|.|+||||+.|+.+|.++|+ +++++.+++....
T Consensus 78 ~~~~~~~-~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~ 142 (267)
T d1r88a_ 78 QDGSKQW-DTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYP 142 (267)
T ss_dssp SCTTCBH-HHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCT
T ss_pred ccccccH-HHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCC
Confidence 11 1111 112234577788777654 689999999999999999999999 8999999988754
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.15 E-value=1.2e-09 Score=102.51 Aligned_cols=127 Identities=13% Similarity=0.142 Sum_probs=86.0
Q ss_pred EEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhH-------HH----HHHHhccCCeEEEEEcCCCCCC
Q 011425 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-------NE----AAVILLPSNITLFTLDFSGSGL 106 (486)
Q Consensus 38 ~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~-------~~----~~~~L~~~Gy~Vv~~D~rG~G~ 106 (486)
+.++++..+|. ..+.+|+|++...+++.|+|+++||.+++...+ .. +........+.|+.++..+.+.
T Consensus 28 ~~~~~~~~~~~-r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 106 (273)
T d1wb4a1 28 VKETYTGINGT-KSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNC 106 (273)
T ss_dssp EEEEEEETTEE-EEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTC
T ss_pred EEEEEecCCCe-EEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCC
Confidence 66778888884 588899999876667889999999998765432 12 2222333468888888875433
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHhc--------------CCCCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 107 SDGDYVSLGWHEKDDLKVVVSYLRGN--------------KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 107 S~~~~~~~~~~~~~Dl~~~i~~l~~~--------------~~~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
..... ........+..+... .+.++++++|+||||.+++.+|.++|+ +.+++.+++...
T Consensus 107 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~ 180 (273)
T d1wb4a1 107 TAQNF------YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 180 (273)
T ss_dssp CTTTH------HHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred ccccc------hhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccc
Confidence 22211 112222222222211 123689999999999999999999998 999999988653
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.11 E-value=7.8e-10 Score=105.17 Aligned_cols=132 Identities=14% Similarity=0.070 Sum_probs=86.8
Q ss_pred CcceeEEEEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCC--ChhhHHH---HHHHhccCCeEEEEEcCCCCCC
Q 011425 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG--CRADANE---AAVILLPSNITLFTLDFSGSGL 106 (486)
Q Consensus 32 ~~~~~~~~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg--~~~~~~~---~~~~L~~~Gy~Vv~~D~rG~G~ 106 (486)
|.+.+..++. ...-|..|...+. .++.|+|+|+||.++ +...|.. +.+.+.+.|+.||++|-...+.
T Consensus 3 ~~~v~~~~~~-s~~~~r~i~~~~~-------~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~ 74 (280)
T d1dqza_ 3 GLPVEYLQVP-SASMGRDIKVQFQ-------GGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSF 74 (280)
T ss_dssp SSCEEEEEEE-ETTTTEEEEEEEE-------CCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCT
T ss_pred CcEEEEEEEe-cccCCCcceEEee-------CCCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCc
Confidence 4445333332 2345777776552 246799999999875 3445553 4567888899999999532221
Q ss_pred CCC-------CCCCCCcc-hHHHHHHHHHHHHhcCCC--CcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 107 SDG-------DYVSLGWH-EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 107 S~~-------~~~~~~~~-~~~Dl~~~i~~l~~~~~~--~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
... ........ +.--+.+++.+|.+++.. ++++++|+||||+.|+.+|..+|+ +++++.+++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~ 150 (280)
T d1dqza_ 75 YTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp TSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred CccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccC
Confidence 110 01111111 122355677777766544 679999999999999999999999 999999998765
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.54 E-value=2.8e-08 Score=95.95 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=72.4
Q ss_pred CCCcEEEEeCCCCCChhh--HHHHHHH-hccCCeEEEEEcCCCCCCCCCCCCCCCc---chHHHHHHHHHHHHhcCC--C
Q 011425 64 TPLPCVVYCHGNSGCRAD--ANEAAVI-LLPSNITLFTLDFSGSGLSDGDYVSLGW---HEKDDLKVVVSYLRGNKQ--T 135 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~~~--~~~~~~~-L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~---~~~~Dl~~~i~~l~~~~~--~ 135 (486)
..+|++|++||+.++... +..+... |...+++|+++|+.... ...+..... ...+.+..+|++|.+..+ .
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a--~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~ 145 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGS--QTSYTQAANNVRVVGAQVAQMLSMLSANYSYSP 145 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHH--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecccc--CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 568999999999876543 3344444 44456999999996422 111110000 013556777777665433 4
Q ss_pred CcEEEEEEcchHHHHHHHHhcCCCccEEEEcCCccC
Q 011425 136 SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD 171 (486)
Q Consensus 136 ~~i~LvGhSmGG~lAl~~A~~~p~v~~lVl~sp~~~ 171 (486)
++++|||||+||.+|-.++.....+..++.+.|...
T Consensus 146 ~~vhlIGhSLGAhvAG~aG~~~~~l~rItgLDPA~P 181 (337)
T d1rp1a2 146 SQVQLIGHSLGAHVAGEAGSRTPGLGRITGLDPVEA 181 (337)
T ss_dssp GGEEEEEETHHHHHHHHHHHTSTTCCEEEEESCCCT
T ss_pred hheEEEeecHHHhhhHHHHHhhccccceeccCCCcc
Confidence 899999999999999877776666889998888765
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.53 E-value=1.9e-08 Score=94.82 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=65.7
Q ss_pred EEEEeCCCCCCh---hhHHHHHHHhccC--CeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhcCC-CCcEEEE
Q 011425 68 CVVYCHGNSGCR---ADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ-TSRIGLW 141 (486)
Q Consensus 68 ~VV~lHG~gg~~---~~~~~~~~~L~~~--Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~Lv 141 (486)
+||++||++++. ..+..+...+.+. |+.|+++++.....+.... .......+.+..+.+.+..... .++|.+|
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~-~~~~~~~~~~e~v~~~I~~~~~~~~~v~lV 85 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVEN-SFFLNVNSQVTTVCQILAKDPKLQQGYNAM 85 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHH-HHHSCHHHHHHHHHHHHHSCGGGTTCEEEE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCccccccc-chhhhHHHHHHHHHHHHHhccccccceeEE
Confidence 688999998753 3466666666554 8999999985433221000 0000112334444455543322 2689999
Q ss_pred EEcchHHHHHHHHhcCCC--ccEEEEcCCc
Q 011425 142 GRSMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (486)
Q Consensus 142 GhSmGG~lAl~~A~~~p~--v~~lVl~sp~ 169 (486)
||||||.++-.++.+.+. |..+|.++++
T Consensus 86 GhSqGGLiaR~~i~~~~~~~V~~lITLgsP 115 (279)
T d1ei9a_ 86 GFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp EETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred EEccccHHHHHHHHHcCCCCcceEEEECCC
Confidence 999999999999999875 8889987764
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.27 E-value=2.6e-07 Score=88.86 Aligned_cols=107 Identities=12% Similarity=0.119 Sum_probs=72.0
Q ss_pred CCCCcEEEEeCCCCCChhh--HHHHHHH-hccCCeEEEEEcCCCCCCCCCCCCCCCc---chHHHHHHHHHHHHhcC--C
Q 011425 63 DTPLPCVVYCHGNSGCRAD--ANEAAVI-LLPSNITLFTLDFSGSGLSDGDYVSLGW---HEKDDLKVVVSYLRGNK--Q 134 (486)
Q Consensus 63 ~~~~p~VV~lHG~gg~~~~--~~~~~~~-L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~---~~~~Dl~~~i~~l~~~~--~ 134 (486)
+..+|++|++||+.++... +..+... |....++|+++|+.... ...+..... .....+..+|++|.... .
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a--~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~ 144 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGS--RTEYTQASYNTRVVGAEIAFLVQVLSTEMGYS 144 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHH--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhc--ccchHHHHHhHHHHHHHHHHHHHHHHHhcCCC
Confidence 3568999999999765443 3344444 44457999999996432 111110000 01344566677665442 3
Q ss_pred CCcEEEEEEcchHHHHHHHHhcCCC-ccEEEEcCCccC
Q 011425 135 TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (486)
Q Consensus 135 ~~~i~LvGhSmGG~lAl~~A~~~p~-v~~lVl~sp~~~ 171 (486)
.++++|+|||+||.+|-.++...+. |..++.+.|...
T Consensus 145 ~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P 182 (338)
T d1bu8a2 145 PENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (338)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred cceeEEEeccHHHHHHHHHHHhhccccccccccccCcC
Confidence 4899999999999999999887765 888888888754
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.26 E-value=3.8e-05 Score=76.86 Aligned_cols=134 Identities=15% Similarity=0.175 Sum_probs=88.7
Q ss_pred EEEEEcCCCcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHH----h-------cc------CCeEEEEEcC
Q 011425 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI----L-------LP------SNITLFTLDF 101 (486)
Q Consensus 39 ~i~~~~~dG~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~----L-------~~------~Gy~Vv~~D~ 101 (486)
.-.+...++..|.++.+.... .....|++|++-|+.|++..+..+.+. + .. +-.+++-+|.
T Consensus 23 sGyl~~~~~~~lffw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDq 100 (452)
T d1ivya_ 23 SGYLKSSGSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 100 (452)
T ss_dssp EEEEECSTTEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred eeeeecCCCceEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEec
Confidence 444555677889888775432 224589999999999998887554322 1 11 1257999998
Q ss_pred C-CCCCCCCCCCCCCc---chHHHHHHHH-HHHHhcCC--CCcEEEEEEcchHHHHHHHHhc---CCC--ccEEEEcCCc
Q 011425 102 S-GSGLSDGDYVSLGW---HEKDDLKVVV-SYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAE---DPS--IAGMVLDSAF 169 (486)
Q Consensus 102 r-G~G~S~~~~~~~~~---~~~~Dl~~~i-~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~---~p~--v~~lVl~sp~ 169 (486)
| |.|-|-........ +.+.|+..++ +++..... ..+++|+|-|+||..+-.+|.. .+. ++|+++.+|.
T Consensus 101 PvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 101 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp STTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 6 99998543322221 2245554444 55554322 2689999999999988777654 332 8999999999
Q ss_pred cCHHH
Q 011425 170 SDLFD 174 (486)
Q Consensus 170 ~~~~~ 174 (486)
.+...
T Consensus 181 ~d~~~ 185 (452)
T d1ivya_ 181 SSYEQ 185 (452)
T ss_dssp SBHHH
T ss_pred cCchh
Confidence 87543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=7.3e-07 Score=91.70 Aligned_cols=119 Identities=15% Similarity=0.281 Sum_probs=80.2
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhHHHHHHHhccCCeEEEEEcCC----CCCCCCCCCCCCCcchHHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDDL 122 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~~~~~~~L~~~Gy~Vv~~D~r----G~G~S~~~~~~~~~~~~~Dl 122 (486)
|..-+|.|.......+.|++||+||++- +...+. -...++..++.||.++|| |+-........ +-.-+.|.
T Consensus 97 L~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~-~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~-gN~Gl~Dq 174 (532)
T d2h7ca1 97 LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYD-GLALAAHENVVVVTIQYRLGIWGFFSTGDEHSR-GNWGHLDQ 174 (532)
T ss_dssp CEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSC-CHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC-CCHHHHHH
T ss_pred CEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCC-chhhhhcCceEEEEEeeccCCCccccccccccc-cccccHHH
Confidence 5555889976555667899999999862 333222 123345678999999999 33222211111 11237999
Q ss_pred HHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhcC--CC-ccEEEEcCCcc
Q 011425 123 KVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAED--PS-IAGMVLDSAFS 170 (486)
Q Consensus 123 ~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~--p~-v~~lVl~sp~~ 170 (486)
..+++|+++.... ++|.|+|+|.||..+...+... .. +..+|+.|+..
T Consensus 175 ~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 175 VAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 9999999986432 7999999999998887665532 12 88999988643
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.17 E-value=6.3e-07 Score=86.08 Aligned_cols=138 Identities=9% Similarity=0.026 Sum_probs=78.3
Q ss_pred CcEEEEEEcchHHHHHHHHhcCCC-cc-EEEEcCCc--cCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccc
Q 011425 136 SRIGLWGRSMGAVTSLLYGAEDPS-IA-GMVLDSAF--SDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (486)
Q Consensus 136 ~~i~LvGhSmGG~lAl~~A~~~p~-v~-~lVl~sp~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 211 (486)
++|+|+|+|+||++|+.++..+|+ ++ ++.++++. ....... .........+.... ......... .
T Consensus 11 ~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~~~~--~~~~~~~~~~~~~~---~~~~~~~~~------~ 79 (318)
T d2d81a1 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY--YTSCMYNGYPSITT---PTANMKSWS------G 79 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC--GGGGSTTCCCCCHH---HHHHHHHHB------T
T ss_pred cceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhhcccc--hHHHhhcCCCCCcC---hhHHHHHHh------h
Confidence 689999999999999999999998 65 33333322 1110000 00000000111111 111111000 0
Q ss_pred cccchhhhCCCCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-----CcEEEEeCC-CCCCCC--------------h---
Q 011425 212 MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-----DKNIIKFDG-DHNSSR--------------P--- 268 (486)
Q Consensus 212 ~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-----~~~l~~~~g-gH~~~~--------------p--- 268 (486)
...+ ........|++|+||..|.+|++..++.+++.+.. ...++..++ ||.+.. +
T Consensus 80 ~~i~--~~~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~~g~g~~~c~~~~~pyi 157 (318)
T d2d81a1 80 NQIA--SVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYI 157 (318)
T ss_dssp TTBC--CGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCE
T ss_pred cCCc--chhccCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCCCCcccccccccCChhh
Confidence 0011 11222357999999999999999999999998752 355666676 997430 0
Q ss_pred ----HHHHHHHHHHHHHhcCCC
Q 011425 269 ----QFYYDSVSIFFYNVLHPP 286 (486)
Q Consensus 269 ----~~~~~~I~~FL~~~l~~~ 286 (486)
-.-...|++||...+.++
T Consensus 158 ~~C~~d~a~~iL~~~yg~~~~~ 179 (318)
T d2d81a1 158 SNCNYDGAGAALKWIYGSLNAR 179 (318)
T ss_dssp EECSSCHHHHHHHHHHSSCCCC
T ss_pred hcCCCcHHHHHHHHHhcccCcc
Confidence 123477888888777653
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.13 E-value=0.00029 Score=69.70 Aligned_cols=124 Identities=14% Similarity=0.191 Sum_probs=80.1
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHH----------hcc------CCeEEEEEcCC-CCCCCCC
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI----------LLP------SNITLFTLDFS-GSGLSDG 109 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~----------L~~------~Gy~Vv~~D~r-G~G~S~~ 109 (486)
+..|.++.+.... .....|+||++-|+.|++..+..+.+. +.. +-.+++-+|.| |.|-|-.
T Consensus 27 ~~~lfyw~~~s~~--~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~ 104 (421)
T d1wpxa1 27 DKHFFFWTFESRN--DPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYS 104 (421)
T ss_dssp CCEEEEEEECCSS--CTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBC
T ss_pred CceEEEEEEEeCC--CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCCCceec
Confidence 5678887764432 235679999999999998887655421 111 12689999955 8898842
Q ss_pred C-CCCCCc-chHHHHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHhc-----CCC--ccEEEEcCCccCH
Q 011425 110 D-YVSLGW-HEKDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAE-----DPS--IAGMVLDSAFSDL 172 (486)
Q Consensus 110 ~-~~~~~~-~~~~Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~~-----~p~--v~~lVl~sp~~~~ 172 (486)
. ...... ..+.|+..++..+.+..+ ..+++|.|-|+||..+-.+|.. .+. ++|+++.+|..+.
T Consensus 105 ~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~dp 181 (421)
T d1wpxa1 105 GSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp SSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCCH
T ss_pred CCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCcccc
Confidence 2 221111 124555555443333322 2589999999999988777643 122 8899999988764
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.12 E-value=2.2e-06 Score=87.06 Aligned_cols=119 Identities=18% Similarity=0.241 Sum_probs=79.5
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhHHH-HHHHhccCCeEEEEEcCC----CCCC-CCCCCCCCCcchHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADANE-AAVILLPSNITLFTLDFS----GSGL-SDGDYVSLGWHEKD 120 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~~~-~~~~L~~~Gy~Vv~~D~r----G~G~-S~~~~~~~~~~~~~ 120 (486)
|..-+|.|.. ...+.|+||++||++- +...+.. ....+.+.++.||.++|| |+-. ++......+-.-+.
T Consensus 82 L~lni~~P~~--~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~ 159 (483)
T d1qe3a_ 82 LYVNVFAPDT--PSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLL 159 (483)
T ss_dssp CEEEEEEECS--SCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHH
T ss_pred CEEEEEECCC--CCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccH
Confidence 6677899974 3457899999999962 2222211 223344457999999999 3321 11111111112379
Q ss_pred HHHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhcCC--C-ccEEEEcCCcc
Q 011425 121 DLKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFS 170 (486)
Q Consensus 121 Dl~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~p--~-v~~lVl~sp~~ 170 (486)
|...+++|+++.... ++|.|+|+|.||..+..++.... . +..+|+.|+..
T Consensus 160 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 160 DQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 999999999987432 79999999999999877765422 2 89999988764
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.07 E-value=1.7e-06 Score=88.93 Aligned_cols=119 Identities=17% Similarity=0.246 Sum_probs=77.7
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCC---CChhh-HHHHHHHhccCCeEEEEEcCC----CCCCCCCCCCCCCcchHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRAD-ANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDD 121 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~-~~~~~~~L~~~Gy~Vv~~D~r----G~G~S~~~~~~~~~~~~~D 121 (486)
|..-+|.|.. ...+.|++||+||++ |+... .......++..++.||.++|| |+-.........+-.-+.|
T Consensus 92 L~LnI~~P~~--~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~D 169 (532)
T d1ea5a_ 92 LYLNIWVPSP--RPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLD 169 (532)
T ss_dssp CEEEEEECSS--CCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHH
T ss_pred CEEEEEeCCC--CCCCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCcccchh
Confidence 5556888974 345689999999985 22211 111222344568999999999 3322221111111123799
Q ss_pred HHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhcC---CCccEEEEcCCcc
Q 011425 122 LKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAED---PSIAGMVLDSAFS 170 (486)
Q Consensus 122 l~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~---p~v~~lVl~sp~~ 170 (486)
...+++|+++.... ++|.|+|+|.||..+..++... +-+..+|+.++..
T Consensus 170 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 170 QRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 99999999987432 7999999999998877665532 1288999887654
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.05 E-value=3.6e-06 Score=86.60 Aligned_cols=120 Identities=14% Similarity=0.182 Sum_probs=78.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhH--HHHH--HHhccCCeEEEEEcCCC----CCCCCC-CCCCCCcc
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADA--NEAA--VILLPSNITLFTLDFSG----SGLSDG-DYVSLGWH 117 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~--~~~~--~~L~~~Gy~Vv~~D~rG----~G~S~~-~~~~~~~~ 117 (486)
|..-+|.|.......+.|+|||+||++- +...+ ..++ ..+..+++.||.++||- +-..+. .....+-.
T Consensus 98 L~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~ 177 (534)
T d1llfa_ 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNA 177 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTH
T ss_pred CEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCccccccccccc
Confidence 5666899976555678999999999873 33222 2222 34567799999999992 221110 00001112
Q ss_pred hHHHHHHHHHHHHhcCC-----CCcEEEEEEcchHHHHHHHHh-c----CCC----ccEEEEcCCc
Q 011425 118 EKDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGA-E----DPS----IAGMVLDSAF 169 (486)
Q Consensus 118 ~~~Dl~~~i~~l~~~~~-----~~~i~LvGhSmGG~lAl~~A~-~----~p~----v~~lVl~sp~ 169 (486)
-+.|...+++|+++... .++|.|+|+|.||..+...+. . .|. +..+|+.|+.
T Consensus 178 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 178 GLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred chhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 26899999999998743 279999999999986654432 1 121 8889998864
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.05 E-value=3.2e-06 Score=86.71 Aligned_cols=119 Identities=14% Similarity=0.206 Sum_probs=76.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhHH-HHHHHhccCCeEEEEEcCC----CCCCCCCCCCCCCcchHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADAN-EAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDD 121 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~~-~~~~~L~~~Gy~Vv~~D~r----G~G~S~~~~~~~~~~~~~D 121 (486)
|..-+|.|.. ...+.|++|++||++- +..... .........++.||.++|| |+-..+......+-.-+.|
T Consensus 90 L~lnI~~P~~--~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~D 167 (526)
T d1p0ia_ 90 LYLNVWIPAP--KPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFD 167 (526)
T ss_dssp CEEEEEEESS--CCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHH
T ss_pred CEEEEEeCCC--CCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccccccccc
Confidence 6666889974 3456799999999862 222211 1111223458999999999 2222211111111123799
Q ss_pred HHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhcCC-C--ccEEEEcCCcc
Q 011425 122 LKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAFS 170 (486)
Q Consensus 122 l~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~p-~--v~~lVl~sp~~ 170 (486)
...+++|+++.... ++|.|+|+|.||..+...+.... + +..+|+.++..
T Consensus 168 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 168 QQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 99999999886432 79999999999998865544321 2 88888877543
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.04 E-value=2.6e-06 Score=87.80 Aligned_cols=120 Identities=18% Similarity=0.231 Sum_probs=78.3
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCC---ChhhHH-HHHHHhccCCeEEEEEcCC----CCCCCCCCCCCCCcchHHH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADAN-EAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDD 121 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg---~~~~~~-~~~~~L~~~Gy~Vv~~D~r----G~G~S~~~~~~~~~~~~~D 121 (486)
|..-+|.|... ...+.|++|++||++- +..... .-....+..++.||.++|| |+-.........+-.-+.|
T Consensus 97 L~LnI~~P~~~-~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~D 175 (542)
T d2ha2a1 97 LYLNVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLD 175 (542)
T ss_dssp CEEEEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHH
T ss_pred CEEEEEecCCC-CCCCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCcCCccc
Confidence 55568888743 3356799999999862 222211 1112223458999999999 4422221111112123789
Q ss_pred HHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhcCC---CccEEEEcCCcc
Q 011425 122 LKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAEDP---SIAGMVLDSAFS 170 (486)
Q Consensus 122 l~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~p---~v~~lVl~sp~~ 170 (486)
...+++|+++.... ++|.|+|+|.||..+..++.... -+..+|+.++..
T Consensus 176 q~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 176 QRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 99999999986432 79999999999999887665432 288889887643
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.01 E-value=4.1e-06 Score=86.40 Aligned_cols=117 Identities=17% Similarity=0.223 Sum_probs=78.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCCCC---hhhH--HHHH--HHhccCCeEEEEEcCC----CCCCCCC----CCCCC
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGC---RADA--NEAA--VILLPSNITLFTLDFS----GSGLSDG----DYVSL 114 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~gg~---~~~~--~~~~--~~L~~~Gy~Vv~~D~r----G~G~S~~----~~~~~ 114 (486)
|...+|.|.....+.+.|+|||+||++-. ...+ ..+. ...+..++.||.++|| |+-.... .+...
T Consensus 106 L~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~ 185 (544)
T d1thga_ 106 LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNA 185 (544)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTH
T ss_pred CEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccH
Confidence 56668899865566778999999999732 2221 2222 2335678999999999 3322211 11112
Q ss_pred CcchHHHHHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhcC-------C-C-ccEEEEcCCc
Q 011425 115 GWHEKDDLKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAED-------P-S-IAGMVLDSAF 169 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~-------p-~-v~~lVl~sp~ 169 (486)
-+.|...+++|+++.... ++|.|+|+|.||..+..++... . . +..+|+.|+.
T Consensus 186 ---Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 186 ---GLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp ---HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred ---HHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 278999999999987432 7999999999998776554321 1 2 8899998864
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.94 E-value=5e-06 Score=85.13 Aligned_cols=120 Identities=18% Similarity=0.245 Sum_probs=77.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEeCCCC---CChhhHHHHH-HHhccCCeEEEEEcCCC----CCCCCC--CCCCCCcchH
Q 011425 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAA-VILLPSNITLFTLDFSG----SGLSDG--DYVSLGWHEK 119 (486)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VV~lHG~g---g~~~~~~~~~-~~L~~~Gy~Vv~~D~rG----~G~S~~--~~~~~~~~~~ 119 (486)
|..-+|.|.......+.|++||+||++ |+...+..-. ......++.||.++||= +-.+.. ...... .-+
T Consensus 81 L~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N-~Gl 159 (517)
T d1ukca_ 81 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLN-AGL 159 (517)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTT-HHH
T ss_pred CEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccc-hhH
Confidence 566689997655556789999999986 2332222111 12345578999999992 221110 001011 227
Q ss_pred HHHHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhc----CCC-ccEEEEcCCcc
Q 011425 120 DDLKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAE----DPS-IAGMVLDSAFS 170 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~----~p~-v~~lVl~sp~~ 170 (486)
.|...+++|+++.... ++|.|+|+|.||..+...+.. ... +..+|+.|+..
T Consensus 160 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 160 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 8999999999987432 799999999999877644322 122 89999988754
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.83 E-value=2.8e-06 Score=83.44 Aligned_cols=97 Identities=15% Similarity=0.074 Sum_probs=65.7
Q ss_pred CCCcEEEEeCCCCCCh-------hhHHH----HHHHhccCCeEEEEEcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHhc
Q 011425 64 TPLPCVVYCHGNSGCR-------ADANE----AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGN 132 (486)
Q Consensus 64 ~~~p~VV~lHG~gg~~-------~~~~~----~~~~L~~~Gy~Vv~~D~rG~G~S~~~~~~~~~~~~~Dl~~~i~~l~~~ 132 (486)
.++-+|||+||+.|.. .+|.. +.+.|...|+.|++......+.. .+-..++..+|+..
T Consensus 5 ~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~S~-----------~~RA~eL~~~I~~~ 73 (388)
T d1ku0a_ 5 ANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSN-----------WDRACEAYAQLVGG 73 (388)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSBCH-----------HHHHHHHHHHHHCE
T ss_pred CCCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCccCH-----------HHHHHHHHHHHhhh
Confidence 3456799999987642 23432 67778889999999998644422 13344455555421
Q ss_pred ---C-------------------------CCCcEEEEEEcchHHHHHHHHhcCC-------------------------C
Q 011425 133 ---K-------------------------QTSRIGLWGRSMGAVTSLLYGAEDP-------------------------S 159 (486)
Q Consensus 133 ---~-------------------------~~~~i~LvGhSmGG~lAl~~A~~~p-------------------------~ 159 (486)
+ ...+|.||||||||..+-.++...+ .
T Consensus 74 ~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (388)
T d1ku0a_ 74 TVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHR 153 (388)
T ss_dssp EEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCC
T ss_pred hhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCc
Confidence 1 1258999999999999988876422 2
Q ss_pred -ccEEEEcCCccC
Q 011425 160 -IAGMVLDSAFSD 171 (486)
Q Consensus 160 -v~~lVl~sp~~~ 171 (486)
|+.|+.++.+-.
T Consensus 154 ~V~SvTTIsTPH~ 166 (388)
T d1ku0a_ 154 FVLSVTTIATPHD 166 (388)
T ss_dssp CEEEEEEESCCTT
T ss_pred ceEEEEeccCCCC
Confidence 889998887643
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.75 E-value=1.7e-05 Score=82.24 Aligned_cols=120 Identities=19% Similarity=0.302 Sum_probs=75.3
Q ss_pred EEEEEEecCCCCC-CCCCcEEEEeCCCC---CChhhHH------HHHHHhcc-CCeEEEEEcCC----CCCCCCCCCCCC
Q 011425 50 LQCSHYMPSPFPE-DTPLPCVVYCHGNS---GCRADAN------EAAVILLP-SNITLFTLDFS----GSGLSDGDYVSL 114 (486)
Q Consensus 50 L~~~~~~P~~~~~-~~~~p~VV~lHG~g---g~~~~~~------~~~~~L~~-~Gy~Vv~~D~r----G~G~S~~~~~~~ 114 (486)
|..-+|.|..... ..+.|+|||+||++ |+..... .-...|+. .++.||.++|| |+-....... .
T Consensus 81 L~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~-~ 159 (579)
T d2bcea_ 81 LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNL-P 159 (579)
T ss_dssp CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTC-C
T ss_pred CEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCC-C
Confidence 5666888865333 34679999999986 2221110 00123333 36999999999 3321111111 1
Q ss_pred CcchHHHHHHHHHHHHhcCCC-----CcEEEEEEcchHHHHHHHHhcC--CC-ccEEEEcCCcc
Q 011425 115 GWHEKDDLKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAED--PS-IAGMVLDSAFS 170 (486)
Q Consensus 115 ~~~~~~Dl~~~i~~l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~--p~-v~~lVl~sp~~ 170 (486)
+-.-+.|...+++|++++... ++|.|+|+|.||..+...+... .. +..+|+.|+..
T Consensus 160 gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 160 GNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred ccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 112278999999999987432 7999999999998887655432 22 89999988643
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=97.73 E-value=0.0011 Score=66.76 Aligned_cols=127 Identities=13% Similarity=0.188 Sum_probs=76.2
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEeCCCCCChhhHHHHHHH----h------cc------CCeEEEEEcCC-CCCCCCC
Q 011425 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI----L------LP------SNITLFTLDFS-GSGLSDG 109 (486)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VV~lHG~gg~~~~~~~~~~~----L------~~------~Gy~Vv~~D~r-G~G~S~~ 109 (486)
+..+.++.+.....+.....|+||++-|+.|++..+..+.+. + .. +-.+++-+|.| |.|-|-.
T Consensus 48 ~~~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~ 127 (483)
T d1ac5a_ 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSS
T ss_pred cceEEEEEEEecCCCCCCCCCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeec
Confidence 345676666443222223469999999999998876544311 1 00 13689999975 8888853
Q ss_pred CCCC--------CCcch---HHHHHHHH-HHHHhcCC--CCcEEEEEEcchHHHHHHHHhcC-----------C--CccE
Q 011425 110 DYVS--------LGWHE---KDDLKVVV-SYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAED-----------P--SIAG 162 (486)
Q Consensus 110 ~~~~--------~~~~~---~~Dl~~~i-~~l~~~~~--~~~i~LvGhSmGG~lAl~~A~~~-----------p--~v~~ 162 (486)
.... ..... +.++..++ .|+..... ..+++|.|-|+||..+-.+|..- + .+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkG 207 (483)
T d1ac5a_ 128 QNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred CCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCccccee
Confidence 2111 11111 23333333 23333322 27899999999999887766541 2 2899
Q ss_pred EEEcCCccCHH
Q 011425 163 MVLDSAFSDLF 173 (486)
Q Consensus 163 lVl~sp~~~~~ 173 (486)
+.+.+|..+..
T Consensus 208 i~IGNg~~d~~ 218 (483)
T d1ac5a_ 208 LLIGNGWIDPN 218 (483)
T ss_dssp EEEEEECCCHH
T ss_pred eeecCCccChh
Confidence 99988877653
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.71 E-value=3.6e-05 Score=79.53 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=68.2
Q ss_pred CCCCcEEEEeCCCC---CChhhHHHHHHHhc-cCCeEEEEEcCC----CCCCC------CCCCCCCCcchHHHHHHHHHH
Q 011425 63 DTPLPCVVYCHGNS---GCRADANEAAVILL-PSNITLFTLDFS----GSGLS------DGDYVSLGWHEKDDLKVVVSY 128 (486)
Q Consensus 63 ~~~~p~VV~lHG~g---g~~~~~~~~~~~L~-~~Gy~Vv~~D~r----G~G~S------~~~~~~~~~~~~~Dl~~~i~~ 128 (486)
..+.|+|||+||++ |+......-...|+ ..++.||.++|| |+-.. .......+-.-+.|...+++|
T Consensus 136 ~~~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~W 215 (571)
T d1dx4a_ 136 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 215 (571)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHH
Confidence 35679999999985 22222111112333 336899999999 22111 101111111227999999999
Q ss_pred HHhcCCC-----CcEEEEEEcchHHHHHHHHhcCC-C--ccEEEEcCCcc
Q 011425 129 LRGNKQT-----SRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAFS 170 (486)
Q Consensus 129 l~~~~~~-----~~i~LvGhSmGG~lAl~~A~~~p-~--v~~lVl~sp~~ 170 (486)
+++.... ++|.|+|+|.||..+...+.... + +..+|+.++..
T Consensus 216 V~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 216 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 9997532 79999999999998876654422 2 88888877644
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=95.29 E-value=0.065 Score=46.38 Aligned_cols=86 Identities=10% Similarity=-0.073 Sum_probs=56.3
Q ss_pred HHHHhccCCeEEEEEcCCCCCCCCCC--CCCCCcchHHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcCC----
Q 011425 85 AAVILLPSNITLFTLDFSGSGLSDGD--YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP---- 158 (486)
Q Consensus 85 ~~~~L~~~Gy~Vv~~D~rG~G~S~~~--~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~p---- 158 (486)
+...+...+..+..++++......+. +......-+.++...+.....+.+..+|+|+|+|.|+.++-.++...+
T Consensus 43 l~~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~ 122 (197)
T d1cexa_ 43 LESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIR 122 (197)
T ss_dssp HHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHH
T ss_pred HHHhcCCCcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhh
Confidence 33444455677777776643211111 110111125777888888888777789999999999999988887654
Q ss_pred -CccEEEEcCCcc
Q 011425 159 -SIAGMVLDSAFS 170 (486)
Q Consensus 159 -~v~~lVl~sp~~ 170 (486)
+|.++|+++-+.
T Consensus 123 ~~V~avvlfGDP~ 135 (197)
T d1cexa_ 123 DKIAGTVLFGYTK 135 (197)
T ss_dssp TTEEEEEEESCTT
T ss_pred hhEEEEEEEeCCC
Confidence 389999887554
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=95.13 E-value=0.094 Score=47.76 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
.++...|+.+....+..+|++.|||+||.+|..+|..
T Consensus 121 ~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 121 DDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 4455555655555556799999999999999988765
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=94.84 E-value=0.028 Score=51.14 Aligned_cols=51 Identities=18% Similarity=0.188 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc----CCCccEEEEcCCcc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE----DPSIAGMVLDSAFS 170 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~----~p~v~~lVl~sp~~ 170 (486)
.++...+..+....+..+|++.|||+||.+|..++.. .+.+..+...+|..
T Consensus 109 ~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~l~~~~~~~~~~tFG~Prv 163 (261)
T d1uwca_ 109 DQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRS 163 (261)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEEEEEESCCCC
T ss_pred HHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHHHHhcCCCcceEEecCccc
Confidence 4566666666666666799999999999999887754 34466555444444
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=94.29 E-value=0.036 Score=50.59 Aligned_cols=50 Identities=20% Similarity=0.196 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhcC----CCccEEEEcCCc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED----PSIAGMVLDSAF 169 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~~----p~v~~lVl~sp~ 169 (486)
+++...++.+.+..+..+|++.|||+||.+|..++... +.+..+..-+|.
T Consensus 122 ~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l~~~~~~i~~~tFG~Pr 175 (269)
T d1tiba_ 122 DTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred HHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHHHHhccCcceEEEecCCC
Confidence 45556666666665667999999999999999887642 336544444443
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=94.20 E-value=0.022 Score=52.03 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
.++...+..+.+..+..+|++.|||+||.+|..+|..
T Consensus 117 ~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 117 NDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 4455556655555566799999999999999888753
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=93.76 E-value=0.029 Score=51.17 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHhc
Q 011425 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (486)
Q Consensus 120 ~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~~ 156 (486)
.++...+..+.+..+..+|++.|||+||.+|..+|..
T Consensus 116 ~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 116 NELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 3445555555555566899999999999999987753
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=89.76 E-value=0.63 Score=40.10 Aligned_cols=62 Identities=13% Similarity=0.111 Sum_probs=41.3
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCcch-----HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHh
Q 011425 93 NITLFTLDFSGSGLSDGDYVSLGWHE-----KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 93 Gy~Vv~~D~rG~G~S~~~~~~~~~~~-----~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~ 155 (486)
+..+..++||....... .....|.. +..+...|....++.+..+++|+|+|.|+.++-.++.
T Consensus 35 ~~~~~~v~YpA~~~~~~-~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 35 GSTAEAINYPACGGQSS-CGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp TCEEEECCCCCCSSCGG-GTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHH
T ss_pred CCeeEEecccccccccc-cccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHh
Confidence 56778889986432210 01112211 4567777777777767789999999999999987764
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=86.35 E-value=0.48 Score=40.93 Aligned_cols=62 Identities=11% Similarity=0.065 Sum_probs=42.4
Q ss_pred CeEEEEEcCCCCCCCCCCCCCCCcc----h-HHHHHHHHHHHHhcCCCCcEEEEEEcchHHHHHHHHh
Q 011425 93 NITLFTLDFSGSGLSDGDYVSLGWH----E-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (486)
Q Consensus 93 Gy~Vv~~D~rG~G~S~~~~~~~~~~----~-~~Dl~~~i~~l~~~~~~~~i~LvGhSmGG~lAl~~A~ 155 (486)
|..+..++||........ ....|. . +.++...|....++.+..+|+|+|+|.|+.++-.++.
T Consensus 35 ~~~~~~v~YPA~~~~~~~-~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 35 GTTSEAIVYPACGGQASC-GGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp TEEEEECCSCCCSSCGGG-TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHH
T ss_pred CCeEEEeeeccccccccc-ccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHh
Confidence 677888999865322100 011121 1 5667777777777767789999999999999988764
|