Query 011426
Match_columns 486
No_of_seqs 233 out of 1495
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 01:13:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011426.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011426hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 7E-118 2E-122 910.8 40.9 419 48-486 25-454 (454)
2 PLN02209 serine carboxypeptida 100.0 3E-101 6E-106 797.5 42.5 403 49-482 21-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 1E-100 2E-105 793.3 41.2 401 49-482 19-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 1E-99 2E-104 792.1 33.7 401 57-479 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.8E-92 3.8E-97 740.4 41.0 382 62-482 43-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 2.1E-73 4.6E-78 572.0 31.6 311 140-482 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 3.4E-67 7.4E-72 530.9 21.5 367 80-480 86-491 (498)
8 KOG1283 Serine carboxypeptidas 100.0 1.4E-64 3E-69 478.9 15.1 393 67-478 4-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.3 3.8E-10 8.2E-15 109.9 20.2 129 67-236 3-131 (288)
10 TIGR03611 RutD pyrimidine util 99.3 1.8E-10 3.9E-15 110.4 16.6 116 82-238 2-117 (257)
11 TIGR03056 bchO_mg_che_rel puta 99.2 8.8E-10 1.9E-14 107.6 18.2 123 70-238 10-132 (278)
12 PLN02824 hydrolase, alpha/beta 99.2 1.2E-09 2.7E-14 108.5 19.0 125 68-236 10-137 (294)
13 PRK00870 haloalkane dehalogena 99.1 5.1E-09 1.1E-13 104.6 20.2 139 51-235 9-149 (302)
14 PHA02857 monoglyceride lipase; 99.1 6E-09 1.3E-13 102.4 20.0 123 78-237 10-133 (276)
15 PLN02298 hydrolase, alpha/beta 99.1 7.7E-09 1.7E-13 104.7 20.0 139 65-237 31-170 (330)
16 PRK03204 haloalkane dehalogena 99.1 3.3E-09 7.1E-14 105.4 16.5 123 66-236 14-136 (286)
17 PRK10673 acyl-CoA esterase; Pr 99.1 6.5E-09 1.4E-13 100.5 17.0 104 90-234 11-114 (255)
18 PLN02385 hydrolase; alpha/beta 99.0 1.6E-08 3.5E-13 103.3 19.7 127 78-237 71-198 (349)
19 TIGR03343 biphenyl_bphD 2-hydr 99.0 3E-08 6.6E-13 97.4 20.6 60 395-478 222-281 (282)
20 PLN03084 alpha/beta hydrolase 99.0 1.3E-08 2.8E-13 105.0 18.3 133 62-236 100-232 (383)
21 PRK03592 haloalkane dehalogena 99.0 9.8E-09 2.1E-13 102.0 15.5 120 70-238 11-130 (295)
22 PLN02679 hydrolase, alpha/beta 99.0 5.1E-08 1.1E-12 100.1 21.1 127 67-235 62-190 (360)
23 TIGR02240 PHA_depoly_arom poly 99.0 2.9E-08 6.3E-13 97.7 17.8 117 78-237 11-127 (276)
24 TIGR02427 protocat_pcaD 3-oxoa 98.9 4.5E-08 9.7E-13 92.9 14.8 60 395-478 192-251 (251)
25 PF12697 Abhydrolase_6: Alpha/ 98.9 2.5E-08 5.5E-13 92.8 12.7 104 98-239 1-104 (228)
26 PRK14875 acetoin dehydrogenase 98.9 1.5E-07 3.2E-12 96.5 18.9 114 78-235 118-231 (371)
27 PLN02578 hydrolase 98.8 2.2E-07 4.9E-12 95.1 19.9 112 78-235 75-186 (354)
28 TIGR01249 pro_imino_pep_1 prol 98.8 1.7E-07 3.6E-12 93.9 17.9 126 68-237 6-131 (306)
29 TIGR01738 bioH putative pimelo 98.8 2.1E-07 4.5E-12 88.0 15.7 59 395-477 187-245 (245)
30 PRK10349 carboxylesterase BioH 98.8 1.3E-07 2.8E-12 91.8 13.8 60 395-478 195-254 (256)
31 PRK06489 hypothetical protein; 98.7 1.3E-06 2.8E-11 89.6 21.6 142 64-235 39-188 (360)
32 PLN02652 hydrolase; alpha/beta 98.7 5.4E-07 1.2E-11 93.5 18.3 127 78-237 120-246 (395)
33 PLN03087 BODYGUARD 1 domain co 98.7 1.1E-06 2.3E-11 93.1 20.6 133 64-234 174-307 (481)
34 KOG4409 Predicted hydrolase/ac 98.7 1.2E-06 2.6E-11 86.7 19.4 138 62-239 61-198 (365)
35 PRK10749 lysophospholipase L2; 98.7 4.7E-07 1E-11 91.8 17.3 126 78-237 40-167 (330)
36 TIGR03695 menH_SHCHC 2-succiny 98.7 5.2E-07 1.1E-11 85.2 14.5 105 95-236 1-105 (251)
37 PLN02894 hydrolase, alpha/beta 98.7 1.9E-06 4.1E-11 89.9 19.7 119 80-236 93-211 (402)
38 PRK11126 2-succinyl-6-hydroxy- 98.6 5.9E-07 1.3E-11 86.1 14.7 100 95-235 2-101 (242)
39 PLN02965 Probable pheophorbida 98.6 5.8E-07 1.3E-11 87.4 14.6 60 395-478 192-251 (255)
40 PRK08775 homoserine O-acetyltr 98.6 1E-06 2.3E-11 89.7 14.1 62 396-480 277-339 (343)
41 TIGR01607 PST-A Plasmodium sub 98.5 4.8E-06 1E-10 84.6 17.3 152 78-237 7-186 (332)
42 KOG4178 Soluble epoxide hydrol 98.5 2.5E-06 5.5E-11 84.0 13.9 118 64-216 20-137 (322)
43 PRK07581 hypothetical protein; 98.4 2.2E-05 4.8E-10 79.7 20.6 59 396-478 275-334 (339)
44 PLN02980 2-oxoglutarate decarb 98.4 7E-06 1.5E-10 99.2 18.5 108 92-235 1368-1479(1655)
45 PLN02511 hydrolase 98.4 1.6E-06 3.6E-11 89.9 11.5 137 67-237 72-211 (388)
46 KOG1454 Predicted hydrolase/ac 98.4 5.1E-06 1.1E-10 84.0 13.4 60 396-479 264-323 (326)
47 PRK00175 metX homoserine O-ace 98.3 4.7E-05 1E-09 78.8 18.5 65 396-480 309-374 (379)
48 PLN02872 triacylglycerol lipas 98.2 1.8E-05 3.9E-10 82.1 13.8 61 396-479 325-388 (395)
49 COG2267 PldB Lysophospholipase 98.2 2.5E-05 5.5E-10 78.0 14.0 136 67-239 10-145 (298)
50 PRK05855 short chain dehydroge 98.2 3.1E-05 6.7E-10 84.2 15.3 101 78-210 12-112 (582)
51 COG1506 DAP2 Dipeptidyl aminop 98.1 2.7E-05 5.9E-10 85.7 13.4 117 77-211 374-492 (620)
52 PF10340 DUF2424: Protein of u 98.1 9.4E-06 2E-10 82.3 8.9 133 80-240 105-239 (374)
53 PF00561 Abhydrolase_1: alpha/ 98.1 9E-06 1.9E-10 76.5 7.6 56 395-474 174-229 (230)
54 TIGR01392 homoserO_Ac_trn homo 98.0 0.00028 6.2E-09 72.1 18.2 63 396-478 288-351 (351)
55 PLN02211 methyl indole-3-aceta 97.8 5.6E-05 1.2E-09 74.6 8.2 117 77-235 5-121 (273)
56 TIGR03100 hydr1_PEP hydrolase, 97.7 0.00087 1.9E-08 66.1 14.1 78 141-237 58-135 (274)
57 TIGR03101 hydr2_PEP hydrolase, 97.6 0.00034 7.3E-09 68.7 10.3 126 78-240 9-138 (266)
58 PRK05077 frsA fermentation/res 97.5 0.00026 5.6E-09 74.1 8.2 122 78-237 178-301 (414)
59 TIGR01840 esterase_phb esteras 97.5 0.00034 7.3E-09 66.2 8.0 115 92-235 10-129 (212)
60 PRK06765 homoserine O-acetyltr 97.4 0.0056 1.2E-07 63.5 16.6 66 395-480 322-388 (389)
61 TIGR02821 fghA_ester_D S-formy 97.3 0.0017 3.8E-08 64.0 10.8 41 189-238 135-175 (275)
62 cd00707 Pancreat_lipase_like P 97.1 0.00047 1E-08 68.1 4.3 113 92-235 33-146 (275)
63 COG0596 MhpC Predicted hydrola 96.9 0.0037 8.1E-08 58.3 8.0 104 95-237 21-124 (282)
64 PLN02442 S-formylglutathione h 96.8 0.0069 1.5E-07 60.0 10.0 57 171-239 125-181 (283)
65 PRK10985 putative hydrolase; P 96.8 0.0046 9.9E-08 62.5 8.7 46 396-465 255-300 (324)
66 KOG2564 Predicted acetyltransf 96.7 0.0077 1.7E-07 58.2 8.7 108 93-233 72-179 (343)
67 PRK10566 esterase; Provisional 96.7 0.0086 1.9E-07 57.6 9.3 62 396-479 186-247 (249)
68 COG3509 LpqC Poly(3-hydroxybut 96.6 0.016 3.4E-07 56.7 9.9 125 78-236 44-179 (312)
69 TIGR03230 lipo_lipase lipoprot 96.5 0.0067 1.5E-07 63.5 7.5 81 140-235 73-153 (442)
70 TIGR00976 /NonD putative hydro 96.5 0.006 1.3E-07 66.3 7.5 129 78-239 6-135 (550)
71 KOG1515 Arylacetamide deacetyl 96.4 0.026 5.6E-07 57.1 10.6 144 68-239 63-210 (336)
72 TIGR01836 PHA_synth_III_C poly 96.4 0.11 2.3E-06 53.1 15.3 62 395-479 285-349 (350)
73 PLN00021 chlorophyllase 96.4 0.0095 2.1E-07 60.0 7.3 116 92-238 49-168 (313)
74 PF00975 Thioesterase: Thioest 96.0 0.014 3E-07 55.4 6.3 102 97-235 2-103 (229)
75 KOG1455 Lysophospholipase [Lip 96.0 0.054 1.2E-06 53.2 10.2 128 78-236 37-164 (313)
76 PRK10115 protease 2; Provision 96.0 0.023 5E-07 63.4 8.8 137 76-240 424-563 (686)
77 PF08386 Abhydrolase_4: TAP-li 95.7 0.039 8.4E-07 45.9 7.0 65 396-484 34-98 (103)
78 PF10230 DUF2305: Uncharacteri 95.6 0.063 1.4E-06 52.7 9.0 119 95-238 2-124 (266)
79 PF07519 Tannase: Tannase and 95.5 0.56 1.2E-05 50.0 16.6 87 385-484 342-431 (474)
80 TIGR01838 PHA_synth_I poly(R)- 95.5 0.68 1.5E-05 50.0 17.2 85 141-239 221-305 (532)
81 PF10503 Esterase_phd: Esteras 95.5 0.041 8.9E-07 52.4 7.0 39 188-235 93-131 (220)
82 KOG2100 Dipeptidyl aminopeptid 95.4 0.045 9.7E-07 61.6 8.3 137 78-239 507-647 (755)
83 PRK10162 acetyl esterase; Prov 95.4 0.04 8.6E-07 55.6 7.1 65 170-238 133-197 (318)
84 PF00326 Peptidase_S9: Prolyl 95.4 0.012 2.7E-07 55.3 3.2 91 139-240 13-103 (213)
85 PF06500 DUF1100: Alpha/beta h 95.1 0.012 2.5E-07 60.8 2.3 82 139-238 217-298 (411)
86 PF12695 Abhydrolase_5: Alpha/ 94.8 0.054 1.2E-06 46.9 5.5 96 97-237 1-96 (145)
87 KOG1838 Alpha/beta hydrolase [ 94.8 0.15 3.3E-06 52.4 9.1 132 68-235 95-235 (409)
88 KOG4391 Predicted alpha/beta h 93.8 0.13 2.9E-06 48.1 5.6 123 78-238 64-186 (300)
89 PRK11460 putative hydrolase; P 93.3 0.25 5.5E-06 47.3 7.2 53 174-236 86-138 (232)
90 cd00312 Esterase_lipase Estera 93.0 0.16 3.4E-06 54.4 5.8 59 171-237 156-214 (493)
91 PRK11071 esterase YqiA; Provis 92.9 0.12 2.5E-06 48.1 3.9 54 396-478 136-189 (190)
92 COG0657 Aes Esterase/lipase [L 92.5 1.3 2.7E-05 44.3 11.3 45 191-240 151-195 (312)
93 PF02230 Abhydrolase_2: Phosph 92.2 0.1 2.3E-06 49.2 2.8 59 170-239 85-143 (216)
94 PF03096 Ndr: Ndr family; Int 91.6 0.84 1.8E-05 44.9 8.3 92 138-250 53-144 (283)
95 PF07859 Abhydrolase_3: alpha/ 91.3 0.38 8.2E-06 44.8 5.6 63 170-238 47-112 (211)
96 PF00326 Peptidase_S9: Prolyl 91.3 0.41 8.9E-06 44.8 5.8 64 395-478 143-207 (213)
97 cd00741 Lipase Lipase. Lipase 90.2 0.76 1.7E-05 40.7 6.2 44 170-216 9-52 (153)
98 PF01764 Lipase_3: Lipase (cla 90.1 0.66 1.4E-05 40.2 5.6 62 170-236 45-106 (140)
99 PRK11460 putative hydrolase; P 90.0 0.56 1.2E-05 44.9 5.4 62 396-477 148-209 (232)
100 PRK10566 esterase; Provisional 89.6 0.5 1.1E-05 45.2 4.8 111 82-212 14-127 (249)
101 PF05990 DUF900: Alpha/beta hy 89.4 0.48 1E-05 45.6 4.5 67 170-239 74-140 (233)
102 cd00519 Lipase_3 Lipase (class 89.3 0.86 1.9E-05 43.4 6.2 59 171-236 110-168 (229)
103 PRK10252 entF enterobactin syn 89.1 1.7 3.7E-05 52.2 9.9 103 95-235 1068-1170(1296)
104 PRK10439 enterobactin/ferric e 89.0 1.3 2.8E-05 46.4 7.7 36 192-236 288-323 (411)
105 COG3319 Thioesterase domains o 89.0 2.6 5.6E-05 41.1 9.2 103 96-236 1-103 (257)
106 PF05728 UPF0227: Uncharacteri 88.8 0.54 1.2E-05 43.6 4.2 50 177-241 47-96 (187)
107 PLN02454 triacylglycerol lipas 88.8 1.1 2.3E-05 46.5 6.7 69 168-238 205-273 (414)
108 PF05577 Peptidase_S28: Serine 88.7 1.2 2.6E-05 46.9 7.3 91 140-242 59-154 (434)
109 PF02129 Peptidase_S15: X-Pro 88.4 0.74 1.6E-05 45.1 5.1 83 141-240 58-140 (272)
110 PRK05371 x-prolyl-dipeptidyl a 88.2 1 2.3E-05 50.9 6.8 90 133-238 272-375 (767)
111 PLN02733 phosphatidylcholine-s 88.0 0.94 2E-05 47.8 5.9 41 169-212 142-182 (440)
112 COG4099 Predicted peptidase [G 87.9 8.1 0.00018 38.3 11.6 127 76-237 169-305 (387)
113 KOG2382 Predicted alpha/beta h 87.3 1.1 2.4E-05 44.6 5.6 61 395-479 252-312 (315)
114 PLN02211 methyl indole-3-aceta 86.6 1.6 3.5E-05 42.8 6.4 59 396-479 211-269 (273)
115 PF02230 Abhydrolase_2: Phosph 85.9 1.2 2.7E-05 41.8 5.0 59 396-478 155-213 (216)
116 COG0400 Predicted esterase [Ge 85.6 4.4 9.5E-05 38.2 8.4 80 167-256 75-157 (207)
117 PF03583 LIP: Secretory lipase 85.3 2.5 5.3E-05 42.1 6.9 70 395-484 218-289 (290)
118 PF06057 VirJ: Bacterial virul 85.2 1.6 3.5E-05 40.3 5.1 64 167-238 46-109 (192)
119 PRK13604 luxD acyl transferase 85.0 5 0.00011 40.2 8.9 123 78-237 19-142 (307)
120 smart00824 PKS_TE Thioesterase 85.0 3.5 7.7E-05 37.5 7.5 76 140-234 25-100 (212)
121 KOG2281 Dipeptidyl aminopeptid 84.8 3.6 7.8E-05 44.6 8.0 126 78-240 622-766 (867)
122 COG0596 MhpC Predicted hydrola 84.7 2.8 6.2E-05 38.5 6.8 62 394-478 219-280 (282)
123 KOG1552 Predicted alpha/beta h 84.0 3.3 7.1E-05 40.1 6.8 109 92-238 57-165 (258)
124 KOG3975 Uncharacterized conser 83.5 3.8 8.2E-05 39.5 6.9 102 92-209 26-127 (301)
125 PF12695 Abhydrolase_5: Alpha/ 83.5 2.2 4.7E-05 36.6 5.1 46 392-460 100-145 (145)
126 TIGR03502 lipase_Pla1_cef extr 83.2 3.5 7.6E-05 46.5 7.6 100 94-212 448-575 (792)
127 PF11144 DUF2920: Protein of u 83.2 2 4.3E-05 44.4 5.3 61 170-239 161-222 (403)
128 PRK04940 hypothetical protein; 83.1 2.2 4.7E-05 39.3 5.0 60 167-241 38-97 (180)
129 PF06342 DUF1057: Alpha/beta h 82.8 9.7 0.00021 37.5 9.5 104 93-235 33-136 (297)
130 PF05677 DUF818: Chlamydia CHL 82.7 1.9 4.2E-05 43.4 4.8 93 91-208 133-231 (365)
131 PLN02571 triacylglycerol lipas 82.2 4.2 9.1E-05 42.3 7.2 68 169-237 204-276 (413)
132 KOG2182 Hydrolytic enzymes of 81.2 17 0.00036 38.6 11.1 49 167-215 147-195 (514)
133 PF11288 DUF3089: Protein of u 81.1 2.3 4.9E-05 40.0 4.5 44 170-215 75-118 (207)
134 COG0400 Predicted esterase [Ge 81.1 2.5 5.4E-05 39.9 4.8 60 395-479 145-204 (207)
135 COG2945 Predicted hydrolase of 80.5 2.2 4.7E-05 39.5 4.0 76 143-237 63-138 (210)
136 KOG4627 Kynurenine formamidase 80.4 1.1 2.5E-05 41.7 2.1 74 151-239 102-175 (270)
137 KOG2931 Differentiation-relate 79.8 26 0.00056 34.7 11.2 93 138-251 76-168 (326)
138 KOG2183 Prolylcarboxypeptidase 79.6 3.4 7.3E-05 42.6 5.4 66 140-209 111-184 (492)
139 PRK10985 putative hydrolase; P 78.7 6.1 0.00013 39.7 7.1 134 71-238 36-170 (324)
140 PF07819 PGAP1: PGAP1-like pro 77.2 11 0.00024 36.0 8.0 42 169-210 60-103 (225)
141 PF00151 Lipase: Lipase; Inte 75.6 0.78 1.7E-05 46.6 -0.4 105 92-215 68-173 (331)
142 PLN02719 triacylglycerol lipas 73.9 9.5 0.00021 40.7 7.0 70 168-237 272-346 (518)
143 PF00756 Esterase: Putative es 73.4 7 0.00015 37.3 5.7 56 171-239 98-153 (251)
144 PF10081 Abhydrolase_9: Alpha/ 72.7 8.3 0.00018 37.9 5.8 39 168-206 85-123 (289)
145 PLN02753 triacylglycerol lipas 72.7 9.6 0.00021 40.8 6.7 71 167-237 285-360 (531)
146 PRK13604 luxD acyl transferase 72.5 7.1 0.00015 39.1 5.5 47 396-464 202-248 (307)
147 PF12146 Hydrolase_4: Putative 71.1 15 0.00033 28.7 6.1 78 79-180 2-79 (79)
148 PRK11071 esterase YqiA; Provis 70.5 9.2 0.0002 35.3 5.5 80 96-213 2-82 (190)
149 COG3208 GrsT Predicted thioest 70.3 9 0.00019 36.8 5.4 59 396-478 176-234 (244)
150 KOG3101 Esterase D [General fu 70.0 16 0.00034 34.5 6.7 152 65-240 8-180 (283)
151 COG2272 PnbA Carboxylesterase 69.9 17 0.00037 38.5 7.8 34 176-210 165-198 (491)
152 PLN02310 triacylglycerol lipas 68.5 11 0.00024 39.1 6.1 64 169-236 185-249 (405)
153 PLN02324 triacylglycerol lipas 67.8 15 0.00032 38.3 6.8 48 168-216 192-239 (415)
154 PLN02934 triacylglycerol lipas 67.7 14 0.00029 39.5 6.5 41 173-216 305-345 (515)
155 PLN00413 triacylglycerol lipas 67.4 6.3 0.00014 41.6 4.0 39 174-215 269-307 (479)
156 PF08538 DUF1749: Protein of u 66.8 12 0.00026 37.3 5.7 71 167-241 82-153 (303)
157 PRK14567 triosephosphate isome 65.9 16 0.00034 35.6 6.2 61 169-239 178-238 (253)
158 PRK14566 triosephosphate isome 65.8 15 0.00031 36.0 5.9 62 168-239 187-248 (260)
159 PF11187 DUF2974: Protein of u 65.8 14 0.0003 35.3 5.7 51 175-234 71-121 (224)
160 PRK05077 frsA fermentation/res 65.7 12 0.00027 39.1 5.9 58 396-480 355-412 (414)
161 PLN02847 triacylglycerol lipas 65.3 12 0.00026 40.7 5.6 61 167-234 225-289 (633)
162 PLN02408 phospholipase A1 65.2 10 0.00022 38.8 5.0 46 170-216 179-224 (365)
163 PLN02802 triacylglycerol lipas 64.7 14 0.00031 39.3 6.0 63 170-236 309-371 (509)
164 PLN02761 lipase class 3 family 62.8 19 0.00042 38.5 6.6 69 168-236 267-342 (527)
165 PLN02162 triacylglycerol lipas 62.3 11 0.00023 39.9 4.5 41 173-216 262-302 (475)
166 PF06259 Abhydrolase_8: Alpha/ 62.2 18 0.00039 33.2 5.6 67 139-212 62-129 (177)
167 PF08237 PE-PPE: PE-PPE domain 61.5 29 0.00063 33.1 7.1 86 142-235 4-89 (225)
168 PF03283 PAE: Pectinacetyleste 61.4 55 0.0012 33.7 9.5 132 78-216 34-180 (361)
169 PLN03037 lipase class 3 family 60.9 19 0.00041 38.6 6.1 47 170-216 295-342 (525)
170 KOG1552 Predicted alpha/beta h 60.5 15 0.00033 35.6 4.9 61 396-480 192-252 (258)
171 COG4425 Predicted membrane pro 60.2 20 0.00044 37.4 6.0 37 168-204 373-409 (588)
172 PF05057 DUF676: Putative seri 60.2 13 0.00029 35.1 4.5 50 167-217 54-103 (217)
173 PF08840 BAAT_C: BAAT / Acyl-C 57.6 14 0.0003 34.9 4.2 46 180-235 10-55 (213)
174 COG2819 Predicted hydrolase of 57.6 1E+02 0.0022 30.2 10.0 53 175-236 120-172 (264)
175 PF05448 AXE1: Acetyl xylan es 57.2 43 0.00093 33.8 7.8 142 78-236 66-209 (320)
176 KOG4569 Predicted lipase [Lipi 56.9 22 0.00048 36.1 5.7 57 173-234 155-211 (336)
177 PF08840 BAAT_C: BAAT / Acyl-C 55.9 8.1 0.00018 36.4 2.3 48 396-461 115-163 (213)
178 PRK07868 acyl-CoA synthetase; 55.8 29 0.00062 40.8 7.2 39 192-238 141-179 (994)
179 COG4757 Predicted alpha/beta h 54.2 28 0.0006 33.5 5.4 65 141-210 58-123 (281)
180 COG0627 Predicted esterase [Ge 54.2 49 0.0011 33.4 7.6 130 94-239 52-190 (316)
181 PF01083 Cutinase: Cutinase; 53.4 29 0.00062 31.8 5.4 80 142-237 41-124 (179)
182 KOG2984 Predicted hydrolase [G 52.6 15 0.00032 34.5 3.2 106 78-216 30-138 (277)
183 KOG3724 Negative regulator of 51.8 21 0.00045 40.0 4.7 97 97-210 91-200 (973)
184 PF12740 Chlorophyllase2: Chlo 50.3 26 0.00056 34.2 4.7 64 167-236 62-131 (259)
185 KOG3079 Uridylate kinase/adeny 47.2 11 0.00023 34.8 1.5 16 93-108 5-20 (195)
186 COG1073 Hydrolases of the alph 46.9 40 0.00088 32.2 5.7 61 397-479 233-296 (299)
187 PF06821 Ser_hydrolase: Serine 46.3 25 0.00055 31.9 3.8 38 191-236 54-91 (171)
188 PLN02429 triosephosphate isome 46.2 46 0.001 33.4 5.9 61 169-239 238-299 (315)
189 PLN02442 S-formylglutathione h 45.6 41 0.00088 33.1 5.5 49 394-462 215-264 (283)
190 COG3545 Predicted esterase of 45.6 23 0.0005 32.4 3.3 36 191-235 58-93 (181)
191 PF02450 LCAT: Lecithin:choles 45.3 15 0.00033 38.1 2.5 41 171-215 102-142 (389)
192 COG4782 Uncharacterized protei 43.0 31 0.00067 35.2 4.1 120 93-239 114-237 (377)
193 COG0429 Predicted hydrolase of 42.9 31 0.00067 34.8 4.1 121 78-235 60-185 (345)
194 KOG2551 Phospholipase/carboxyh 42.4 61 0.0013 30.9 5.7 58 396-478 163-222 (230)
195 PF06821 Ser_hydrolase: Serine 42.3 35 0.00075 31.0 4.1 42 397-463 115-156 (171)
196 KOG1516 Carboxylesterase and r 42.1 1.5E+02 0.0032 32.1 9.6 34 176-210 180-213 (545)
197 PLN02561 triosephosphate isome 41.2 63 0.0014 31.4 5.9 60 169-238 179-239 (253)
198 KOG1553 Predicted alpha/beta h 39.9 66 0.0014 32.7 5.7 54 167-234 290-343 (517)
199 PRK07868 acyl-CoA synthetase; 39.7 44 0.00096 39.2 5.5 60 396-479 297-360 (994)
200 cd00311 TIM Triosephosphate is 38.8 87 0.0019 30.3 6.4 60 169-239 175-235 (242)
201 COG3208 GrsT Predicted thioest 38.7 62 0.0013 31.2 5.2 67 140-217 33-99 (244)
202 PRK00042 tpiA triosephosphate 38.4 91 0.002 30.3 6.5 60 169-239 179-239 (250)
203 PLN02517 phosphatidylcholine-s 36.7 58 0.0013 35.6 5.2 44 191-234 212-267 (642)
204 PF00681 Plectin: Plectin repe 35.4 30 0.00066 23.8 2.0 33 233-265 11-43 (45)
205 PF01555 N6_N4_Mtase: DNA meth 34.5 45 0.00096 30.9 3.7 40 142-185 2-41 (231)
206 KOG2382 Predicted alpha/beta h 33.9 94 0.002 31.2 5.9 90 88-203 45-134 (315)
207 PF06028 DUF915: Alpha/beta hy 33.9 1E+02 0.0023 30.0 6.1 61 167-234 81-141 (255)
208 PLN03082 Iron-sulfur cluster a 32.9 54 0.0012 29.6 3.7 66 93-159 76-148 (163)
209 PF03403 PAF-AH_p_II: Platelet 32.3 26 0.00056 36.3 1.7 37 193-239 229-265 (379)
210 PF14020 DUF4236: Protein of u 32.1 55 0.0012 23.9 2.9 15 142-157 40-54 (55)
211 KOG2369 Lecithin:cholesterol a 31.5 51 0.0011 34.8 3.7 73 397-480 374-452 (473)
212 COG3571 Predicted hydrolase of 31.5 58 0.0013 29.5 3.5 29 188-216 85-113 (213)
213 COG3673 Uncharacterized conser 31.3 48 0.001 33.3 3.2 68 140-213 65-143 (423)
214 PF03583 LIP: Secretory lipase 30.3 1.4E+02 0.003 29.5 6.6 66 169-239 45-116 (290)
215 COG1647 Esterase/lipase [Gener 30.1 1.3E+02 0.0028 28.8 5.7 60 397-478 182-242 (243)
216 PF03959 FSH1: Serine hydrolas 30.1 43 0.00094 31.3 2.8 49 396-468 161-209 (212)
217 PF04414 tRNA_deacylase: D-ami 29.9 1.3E+02 0.0029 28.4 5.9 48 166-216 104-152 (213)
218 PF07224 Chlorophyllase: Chlor 29.3 65 0.0014 31.6 3.7 41 192-239 120-160 (307)
219 PF07849 DUF1641: Protein of u 27.7 27 0.00058 23.9 0.6 17 342-358 15-31 (42)
220 PF06309 Torsin: Torsin; Inte 27.2 44 0.00096 28.9 2.0 17 92-108 49-65 (127)
221 PF00448 SRP54: SRP54-type pro 26.7 3.2E+02 0.0069 25.3 7.9 65 140-231 83-147 (196)
222 PF05576 Peptidase_S37: PS-10 25.8 3.3E+02 0.0071 28.6 8.2 90 91-206 59-148 (448)
223 PRK11524 putative methyltransf 25.4 3.5E+02 0.0076 26.5 8.4 77 139-232 26-104 (284)
224 PF04446 Thg1: tRNAHis guanyly 25.3 63 0.0014 28.2 2.7 52 142-200 22-73 (135)
225 PF10503 Esterase_phd: Esteras 25.1 70 0.0015 30.4 3.2 27 396-422 169-195 (220)
226 PF09292 Neil1-DNA_bind: Endon 24.5 43 0.00093 22.2 1.1 12 96-107 25-36 (39)
227 PTZ00333 triosephosphate isome 24.5 1.5E+02 0.0031 29.0 5.3 61 168-238 181-242 (255)
228 PRK14565 triosephosphate isome 24.2 1.4E+02 0.003 28.8 5.0 54 168-239 172-225 (237)
229 TIGR01840 esterase_phb esteras 24.2 56 0.0012 30.3 2.3 28 397-424 169-196 (212)
230 PRK13962 bifunctional phosphog 24.1 1.4E+02 0.003 33.3 5.6 62 168-239 573-635 (645)
231 PRK03995 hypothetical protein; 24.1 1.3E+02 0.0029 29.4 5.0 47 167-216 157-203 (267)
232 TIGR01911 HesB_rel_seleno HesB 22.8 76 0.0016 25.6 2.5 18 97-115 28-45 (92)
233 COG1075 LipA Predicted acetylt 22.6 1.1E+02 0.0024 31.0 4.3 45 167-214 105-149 (336)
234 PF01738 DLH: Dienelactone hyd 22.6 1.5E+02 0.0033 27.4 5.0 47 394-460 143-189 (218)
235 PRK06762 hypothetical protein; 22.1 45 0.00098 29.5 1.2 13 96-108 2-14 (166)
236 KOG2565 Predicted hydrolases o 22.0 4.1E+02 0.0088 27.6 7.9 133 78-239 133-267 (469)
237 PF15253 STIL_N: SCL-interrupt 21.3 1.1E+02 0.0023 32.0 3.8 35 66-103 200-235 (410)
238 TIGR03712 acc_sec_asp2 accesso 21.2 3.4E+02 0.0074 29.1 7.5 116 80-240 277-394 (511)
239 KOG1643 Triosephosphate isomer 21.1 1.1E+02 0.0024 28.6 3.5 86 130-240 149-239 (247)
240 PRK15492 triosephosphate isome 20.8 1.9E+02 0.0041 28.3 5.3 60 169-239 188-248 (260)
241 PF15613 WHIM2: WSTF, HB1, Itc 20.8 1.3E+02 0.0028 20.1 2.9 27 80-106 12-38 (38)
242 TIGR00419 tim triosephosphate 20.8 2.1E+02 0.0046 26.8 5.5 55 169-238 150-204 (205)
243 COG0218 Predicted GTPase [Gene 20.4 1.4E+02 0.003 27.9 4.0 27 127-158 58-84 (200)
244 PF07389 DUF1500: Protein of u 20.4 76 0.0016 25.3 1.9 27 174-202 8-34 (100)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-118 Score=910.83 Aligned_cols=419 Identities=52% Similarity=0.941 Sum_probs=381.9
Q ss_pred hcccccccCccCCC-CCceeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCC
Q 011426 48 EEADRIASLPGQPK-VSFQQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKT 126 (486)
Q Consensus 48 ~~~~~~~~lpg~~~-~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~ 126 (486)
++++.|+.|||++. ++|++|||||+|+++.+++|||||+||+++|+++||||||||||||||+. |+|.|+|||+++.|
T Consensus 25 ~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~ 103 (454)
T KOG1282|consen 25 DEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYN 103 (454)
T ss_pred chhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCC
Confidence 37789999999986 89999999999999889999999999999999999999999999999996 99999999999999
Q ss_pred CCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccH
Q 011426 127 ASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYV 206 (486)
Q Consensus 127 ~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 206 (486)
|.+|..||||||+.||||||||||||||||++++.++. ++|+.+|+|++.||++||++||||++|+|||+|||||||||
T Consensus 104 G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YV 182 (454)
T KOG1282|consen 104 GKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYV 182 (454)
T ss_pred CCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceeh
Confidence 88999999999999999999999999999999988775 69999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCc-ceeeEEEeeccccCcccccccchhhhcccccCCHHHHHHHHHhccccC------CCChHHHH
Q 011426 207 PQLAREIMIHNSKSKHP-INLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDKTYQQLINTCDFRR------QKESDECE 279 (486)
Q Consensus 207 p~la~~i~~~n~~~~~~-inLkGi~IGng~~d~~~~~~~~~~~a~~~glI~~~~~~~~~~~c~~~~------~~~~~~C~ 279 (486)
|+||++|.+.|+....+ |||||++||||++|+..+.+++.+|+|.||+|++++|+.+++.|.+.. .....+|.
T Consensus 183 P~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~ 262 (454)
T KOG1282|consen 183 PALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCN 262 (454)
T ss_pred HHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHH
Confidence 99999999999754334 999999999999999999999999999999999999999999998742 13367899
Q ss_pred HHHHHHH-hhhcCCCCcccccCCCCCCCCchhhhhhhcccCCCCCCCccccccccCCCCCchhHHHhhcCCHHHHHHhcc
Q 011426 280 SLYTYAM-DQEFGNIDQYNIYAAPCNNSDGSAAATRHLMRLPHRPHNYKTLRRISGYDPCTEKYAEIYYNRPDVQKALHA 358 (486)
Q Consensus 280 ~~~~~~~-~~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vr~aLhv 358 (486)
++++... ... ++++.|+++.+.|...... ... + +....+++|.+++.+.|||+++||+||||
T Consensus 263 ~~~~~~~~~~~-~~i~~y~i~~~~C~~~~~~-------~~~---~------~~~~~~~~c~~~~~~~ylN~~~VrkALh~ 325 (454)
T KOG1282|consen 263 KAVEEFDSKTT-GDIDNYYILTPDCYPTSYE-------LKK---P------TDCYGYDPCLSDYAEKYLNRPEVRKALHA 325 (454)
T ss_pred HHHHHHHHHHh-ccCchhhhcchhhcccccc-------ccc---c------ccccccCCchhhhHHHhcCCHHHHHHhCC
Confidence 9999988 444 6899999999999752111 000 0 12356789988777999999999999999
Q ss_pred CCCCCcccccccchhhhccccCCCCChHHHHHHHhhCC-CeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEc-
Q 011426 359 NKTKIPYKWTACSEVLNRNWNDTDVSVLPIYRKMIAGG-LRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVK- 436 (486)
Q Consensus 359 ~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~g-irVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~- 436 (486)
+.+.++ +|+.||+.|+..|.+...++++.+..++.++ +|||||+||+|++||+.||++||++|+++.+.+|+||+++
T Consensus 326 ~~~~~~-~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~ 404 (454)
T KOG1282|consen 326 NKTSIG-KWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKG 404 (454)
T ss_pred CCCCCC-cccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCC
Confidence 976544 7999999998888899999999999999865 9999999999999999999999999999999999999995
Q ss_pred CeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHHHHcCCCCCCCC
Q 011426 437 KQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLRGDPLPKSR 486 (486)
Q Consensus 437 ~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~fl~~~~l~~~~ 486 (486)
+|||||+++|+||||+||+|||||||+|||++|++||++||.|+++|+.+
T Consensus 405 ~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~~ 454 (454)
T KOG1282|consen 405 GQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPSTP 454 (454)
T ss_pred CceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999764
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2.7e-101 Score=797.46 Aligned_cols=403 Identities=30% Similarity=0.593 Sum_probs=344.6
Q ss_pred cccccccCccCC-CCCceeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCC
Q 011426 49 EADRIASLPGQP-KVSFQQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTA 127 (486)
Q Consensus 49 ~~~~~~~lpg~~-~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~ 127 (486)
+.|.|+.|||+. .++++++|||++|+++.+++||||||||+++|+++|++|||||||||||+ +|+|.|+|||+++.++
T Consensus 21 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~ 99 (437)
T PLN02209 21 SGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNKV 99 (437)
T ss_pred ccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccCC
Confidence 668899999985 48899999999999877789999999999999999999999999999999 4999999999998763
Q ss_pred -----CceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccc
Q 011426 128 -----SGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYA 202 (486)
Q Consensus 128 -----~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYg 202 (486)
.++++||+||++.||||||||||||||||+.....+ .+++++|+++++||+.||++||+|+++||||+|||||
T Consensus 100 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 177 (437)
T PLN02209 100 YNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER--TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYS 177 (437)
T ss_pred CCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcC
Confidence 379999999999999999999999999998766543 3567788999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHhcCCCC-cceeeEEEeeccccCcccccccchhhhcccccCCHHHHHHHHHhccccC---CCChHHH
Q 011426 203 GHYVPQLAREIMIHNSKSKH-PINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDKTYQQLINTCDFRR---QKESDEC 278 (486)
Q Consensus 203 G~yvp~la~~i~~~n~~~~~-~inLkGi~IGng~~d~~~~~~~~~~~a~~~glI~~~~~~~~~~~c~~~~---~~~~~~C 278 (486)
|||||.+|++|+++|++... .||||||+||||++||..+..++.+|++.||+|++++|+.+++.|.... ......|
T Consensus 178 G~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C 257 (437)
T PLN02209 178 GMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKC 257 (437)
T ss_pred ceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHH
Confidence 99999999999998754333 3999999999999999999999999999999999999999999996421 1245789
Q ss_pred HHHHHHHHhhhcCCCCcccccCCCCCCCCchhhhhhhcccCCCCCCCccccccccCCCCCch---hHHHhhcCCHHHHHH
Q 011426 279 ESLYTYAMDQEFGNIDQYNIYAAPCNNSDGSAAATRHLMRLPHRPHNYKTLRRISGYDPCTE---KYAEIYYNRPDVQKA 355 (486)
Q Consensus 279 ~~~~~~~~~~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vr~a 355 (486)
.+++.....+. ..+|.|++....|...... ....+|.. ..+..|||+++||+|
T Consensus 258 ~~~i~~~~~~~-~~~~~~~~~~~~c~~~~~~-----------------------~~~~~c~~~~~~~~~~ylN~~~V~~a 313 (437)
T PLN02209 258 LKLVEEYHKCT-DNINSHHTLIANCDDSNTQ-----------------------HISPDCYYYPYHLVECWANNESVREA 313 (437)
T ss_pred HHHHHHHHHHh-hcCCccccccccccccccc-----------------------cCCCCcccccHHHHHHHhCCHHHHHH
Confidence 99888766555 6788887555557432110 01124532 357899999999999
Q ss_pred hccCCCCCcccccccchhhhccccCCCCChHHHHHHHhhCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeE
Q 011426 356 LHANKTKIPYKWTACSEVLNRNWNDTDVSVLPIYRKMIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYV 435 (486)
Q Consensus 356 Lhv~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~ 435 (486)
|||+..... .|..|+..+ .+.+...++++.+..+|.+|+|||||+||.|++||+.|+++|+++|+|+++++|++|++
T Consensus 314 L~v~~~~~~-~w~~~~~~~--~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~ 390 (437)
T PLN02209 314 LHVDKGSIG-EWIRDHRGI--PYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMI 390 (437)
T ss_pred hCCCCCCCC-CCccccchh--hcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEE
Confidence 999843222 699998755 34433334555555666689999999999999999999999999999999999999999
Q ss_pred cCeeeEEEEEeCC-eEEEEEcCceeccccCChHHHHHHHHHHHcCCCC
Q 011426 436 KKQVGGWTEVYEG-LTFATVRGAGHEVPLFKPRAALQLFKSFLRGDPL 482 (486)
Q Consensus 436 ~~q~~G~~~~~~~-Ltf~~V~gAGHmvP~dqP~~a~~mi~~fl~~~~l 482 (486)
++|++||+|+|+| |||++|+||||||| +||++|++||++||.+++|
T Consensus 391 ~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 391 KGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred CCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999999996 99999999999998 6999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1e-100 Score=793.26 Aligned_cols=401 Identities=32% Similarity=0.630 Sum_probs=346.4
Q ss_pred cccccccCccCC-CCCceeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCC-
Q 011426 49 EADRIASLPGQP-KVSFQQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKT- 126 (486)
Q Consensus 49 ~~~~~~~lpg~~-~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~- 126 (486)
+.+.|++|||+. .++++++|||++|+++.+.+||||||||+++|+++|+||||||||||||+. |+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~-g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG-GIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHH-HHHHhcCCceeeccc
Confidence 558899999975 378999999999998667899999999999999999999999999999995 99999999998743
Q ss_pred ----CCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccc
Q 011426 127 ----ASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYA 202 (486)
Q Consensus 127 ----~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYg 202 (486)
+.+++.|++||++.||||||||||||||||+...... .+++++|+++++||+.||++||+|+++||||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 3578999999999999999999999999998766543 3667788999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHhcCCCC-cceeeEEEeeccccCcccccccchhhhcccccCCHHHHHHHHHhccccC---CCChHHH
Q 011426 203 GHYVPQLAREIMIHNSKSKH-PINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDKTYQQLINTCDFRR---QKESDEC 278 (486)
Q Consensus 203 G~yvp~la~~i~~~n~~~~~-~inLkGi~IGng~~d~~~~~~~~~~~a~~~glI~~~~~~~~~~~c~~~~---~~~~~~C 278 (486)
|||||++|++|+++|+.... +||||||+||||+++|..+..++.+|+|.||+|++++++.+++.|.... ......|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 99999999999998864333 3999999999999999999999999999999999999999999997432 1246789
Q ss_pred HHHHHHHHhhhcCCCCcccccCCCCCCCCchhhhhhhcccCCCCCCCccccccccCCCCCch---hHHHhhcCCHHHHHH
Q 011426 279 ESLYTYAMDQEFGNIDQYNIYAAPCNNSDGSAAATRHLMRLPHRPHNYKTLRRISGYDPCTE---KYAEIYYNRPDVQKA 355 (486)
Q Consensus 279 ~~~~~~~~~~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vr~a 355 (486)
..++....... +++|+||++.+.|..... ..++|.. ..++.|||+++||+|
T Consensus 256 ~~~~~~~~~~~-~~~n~yni~~~~~~~~~~-------------------------~~~~c~~~~~~~~~~ylN~~~V~~a 309 (433)
T PLN03016 256 LKLTEEYHKCT-AKINIHHILTPDCDVTNV-------------------------TSPDCYYYPYHLIECWANDESVREA 309 (433)
T ss_pred HHHHHHHHHHh-cCCChhhccCCccccccc-------------------------CCCcccccchHHHHHHhCCHHHHHH
Confidence 99888776666 789999999766632100 0124542 357899999999999
Q ss_pred hccCCCCCcccccccchhhhccccCCCCChHHHHHHHhhCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeE
Q 011426 356 LHANKTKIPYKWTACSEVLNRNWNDTDVSVLPIYRKMIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYV 435 (486)
Q Consensus 356 Lhv~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~ 435 (486)
|||+.... .+|+.||..|. +.....++++.+..++.+|+|||||+||.|++||+.||++|+++|+|++.++|++|++
T Consensus 310 L~v~~~~~-~~w~~cn~~v~--~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~ 386 (433)
T PLN03016 310 LHIEKGSK-GKWARCNRTIP--YNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMI 386 (433)
T ss_pred hCCCCCCC-CCCccCCcccc--cccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccC
Confidence 99974321 27999999885 4433334566666666678999999999999999999999999999999999999999
Q ss_pred cCeeeEEEEEeCC-eEEEEEcCceeccccCChHHHHHHHHHHHcCCCC
Q 011426 436 KKQVGGWTEVYEG-LTFATVRGAGHEVPLFKPRAALQLFKSFLRGDPL 482 (486)
Q Consensus 436 ~~q~~G~~~~~~~-Ltf~~V~gAGHmvP~dqP~~a~~mi~~fl~~~~l 482 (486)
+++++||+++|++ |||++|++|||||| +||++|++||++||.+++|
T Consensus 387 ~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 387 NNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred CCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 9999999999985 99999999999998 7999999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1e-99 Score=792.06 Aligned_cols=401 Identities=40% Similarity=0.720 Sum_probs=326.7
Q ss_pred ccCCC-CCceeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCC-CCceecCC
Q 011426 57 PGQPK-VSFQQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKT-ASGLYLNK 134 (486)
Q Consensus 57 pg~~~-~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~-~~~l~~n~ 134 (486)
||... +++++|||||+|+++.+++||||||||+++|+++||||||||||||||+ +|+|.|+|||+++.+ ..+++.||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 67554 7899999999999777899999999999999999999999999999999 599999999999954 36899999
Q ss_pred CCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHH
Q 011426 135 LSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIM 214 (486)
Q Consensus 135 ~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~ 214 (486)
+||+++||||||||||||||||+.....+ ..+++++|+++++||+.||++||+|+++||||+||||||+|||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDY-VWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGG-S-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccc-cchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 99999999999999999999999877654 35899999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCc-ceeeEEEeeccccCcccccccchhhhcccccCCHHHHHHHHHhcccc--CCCChHHHHHHHHHHHhhh--
Q 011426 215 IHNSKSKHP-INLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDKTYQQLINTCDFR--RQKESDECESLYTYAMDQE-- 289 (486)
Q Consensus 215 ~~n~~~~~~-inLkGi~IGng~~d~~~~~~~~~~~a~~~glI~~~~~~~~~~~c~~~--~~~~~~~C~~~~~~~~~~~-- 289 (486)
++|.....+ ||||||+||||++||..+..++.+|++.||+|+++.++.+.+.|... .......|.++...+....
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 999754334 99999999999999999999999999999999999999999999643 1245678998887776521
Q ss_pred ---cCCCCcccccCCCCCCCCchhhhhhhcccCCCCCCCccccccccCCCCCchhHHHhhcCCHHHHHHhccCCCCCccc
Q 011426 290 ---FGNIDQYNIYAAPCNNSDGSAAATRHLMRLPHRPHNYKTLRRISGYDPCTEKYAEIYYNRPDVQKALHANKTKIPYK 366 (486)
Q Consensus 290 ---~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpc~~~~~~~ylN~~~Vr~aLhv~~~~~~~~ 366 (486)
.+++|+||++.++|... . .. .......+++..+.+..|||+++||+||||+... ..+
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~--~------~~-----------~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~-~~~ 298 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPS--R------SS-----------YDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDS-NVN 298 (415)
T ss_dssp HHHHTTSETTSTTSEETT-S--H------CT-----------TCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTT-SSS
T ss_pred ccccCCcceeeeeccccccc--c------cc-----------ccccccccccchhhHHHHhccHHHHHhhCCCccc-CCc
Confidence 16899999998744211 0 00 0001112244456889999999999999997211 238
Q ss_pred ccccchhh-hcc-ccCCCCChHHHHHHHhhCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeE--cCeeeEE
Q 011426 367 WTACSEVL-NRN-WNDTDVSVLPIYRKMIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYV--KKQVGGW 442 (486)
Q Consensus 367 w~~cs~~v-~~~-~~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~--~~q~~G~ 442 (486)
|+.||+.| +.. ..+.+.++.+.++.||++++|||||+||.|++||+.|+++||++|+|+++++|++|.. +++++||
T Consensus 299 w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~ 378 (415)
T PF00450_consen 299 WQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGY 378 (415)
T ss_dssp --SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEE
T ss_pred ccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccce
Confidence 99999988 333 3367789999999999999999999999999999999999999999999999999987 8999999
Q ss_pred EEEeCCeEEEEEcCceeccccCChHHHHHHHHHHHcC
Q 011426 443 TEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLRG 479 (486)
Q Consensus 443 ~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~fl~~ 479 (486)
+|+++||||++|+|||||||+|||+++++||++||+|
T Consensus 379 ~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 379 VKQYGNLTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp EEEETTEEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred eEEeccEEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.8e-92 Score=740.40 Aligned_cols=382 Identities=29% Similarity=0.582 Sum_probs=331.8
Q ss_pred CCceeEeeeEEecC-CCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccc
Q 011426 62 VSFQQFSGYVPVNK-VPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTE 140 (486)
Q Consensus 62 ~~~~~~sGy~~v~~-~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~ 140 (486)
.++++|||||+|++ ..+++||||||||+.+|+++||+|||||||||||+ .|+|.|+|||+++.++.++..||+||++.
T Consensus 43 ~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~~ 121 (462)
T PTZ00472 43 PSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNNE 121 (462)
T ss_pred CCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccccc
Confidence 57889999999975 44689999999999999999999999999999999 59999999999999877899999999999
Q ss_pred cceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCC
Q 011426 141 ANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKS 220 (486)
Q Consensus 141 a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 220 (486)
+||||||||+||||||+.... + ..+++++|+|+++||+.||++||+|+++|+||+||||||+|+|.+|.+|+++|+.+
T Consensus 122 ~~~l~iDqP~G~G~S~~~~~~-~-~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~ 199 (462)
T PTZ00472 122 AYVIYVDQPAGVGFSYADKAD-Y-DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKG 199 (462)
T ss_pred cCeEEEeCCCCcCcccCCCCC-C-CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcccc
Confidence 999999999999999986543 3 24778999999999999999999999999999999999999999999999998754
Q ss_pred CC-cceeeEEEeeccccCcccccccchhhhcc-------cccCCHHHHHHHHH---hc-------cccCCCChHHHHHHH
Q 011426 221 KH-PINLKGIMVGNAVTDNYYDNLGTVTYWWS-------HAMISDKTYQQLIN---TC-------DFRRQKESDECESLY 282 (486)
Q Consensus 221 ~~-~inLkGi~IGng~~d~~~~~~~~~~~a~~-------~glI~~~~~~~~~~---~c-------~~~~~~~~~~C~~~~ 282 (486)
+. .||||||+||||++||..|..++.+|+|+ +|+|++++++++.+ .| ..........|..+.
T Consensus 200 ~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~ 279 (462)
T PTZ00472 200 DGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVAR 279 (462)
T ss_pred CCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHH
Confidence 33 39999999999999999999999999986 58999999988864 34 321111233465443
Q ss_pred HHHHh-----hhcCCCCcccccCCCCCCCCchhhhhhhcccCCCCCCCccccccccCCCCCch-hHHHhhcCCHHHHHHh
Q 011426 283 TYAMD-----QEFGNIDQYNIYAAPCNNSDGSAAATRHLMRLPHRPHNYKTLRRISGYDPCTE-KYAEIYYNRPDVQKAL 356 (486)
Q Consensus 283 ~~~~~-----~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpc~~-~~~~~ylN~~~Vr~aL 356 (486)
..|.. .. +++|+||++.+ |.. ++|.+ ..+..|||+++||+||
T Consensus 280 ~~c~~~~~~~~~-~g~n~Ydi~~~-c~~------------------------------~~c~~~~~~~~yLN~~~Vq~AL 327 (462)
T PTZ00472 280 ALCNEYIAVYSA-TGLNNYDIRKP-CIG------------------------------PLCYNMDNTIAFMNREDVQSSL 327 (462)
T ss_pred HHHHHHHHHHHh-cCCChhheecc-CCC------------------------------CCccCHHHHHHHhCCHHHHHHh
Confidence 33321 12 57999999975 631 24643 4678999999999999
Q ss_pred ccCCCCCcccccccchhhhcccc-CCCCChHHHHHHHhhCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCc-----cc
Q 011426 357 HANKTKIPYKWTACSEVLNRNWN-DTDVSVLPIYRKMIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKI-----PW 430 (486)
Q Consensus 357 hv~~~~~~~~w~~cs~~v~~~~~-d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~-----~~ 430 (486)
||+. .+|+.||+.|+..+. |.+.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|++++ +|
T Consensus 328 ~v~~----~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~ 403 (462)
T PTZ00472 328 GVKP----ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPD 403 (462)
T ss_pred CCCC----CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCc
Confidence 9973 279999999987776 6677888999999999999999999999999999999999999999975 56
Q ss_pred cce-eEcCeeeEEEEEeC-----CeEEEEEcCceeccccCChHHHHHHHHHHHcCCCC
Q 011426 431 YPW-YVKKQVGGWTEVYE-----GLTFATVRGAGHEVPLFKPRAALQLFKSFLRGDPL 482 (486)
Q Consensus 431 ~~w-~~~~q~~G~~~~~~-----~Ltf~~V~gAGHmvP~dqP~~a~~mi~~fl~~~~l 482 (486)
++| +.+++++||+|+++ ||+|++|++||||||.|||+++++||++|+.++++
T Consensus 404 ~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 404 VPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred cccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 899 56889999999999 99999999999999999999999999999999876
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=2.1e-73 Score=572.00 Aligned_cols=311 Identities=31% Similarity=0.601 Sum_probs=263.6
Q ss_pred ccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcC
Q 011426 140 EANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSK 219 (486)
Q Consensus 140 ~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~ 219 (486)
.|||||||||+||||||+.+...+ ++++++|+|++.||+.||++||+|+++||||+||||||||||.||.+|+++|..
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~--~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc--cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 489999999999999998765543 366778899999999999999999999999999999999999999999998864
Q ss_pred CCC-cceeeEEEeeccccCcccccccchhhhcccccCCHHHHHHHHHhccccC---CCChHHHHHHHHHHHhhhcCCCCc
Q 011426 220 SKH-PINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDKTYQQLINTCDFRR---QKESDECESLYTYAMDQEFGNIDQ 295 (486)
Q Consensus 220 ~~~-~inLkGi~IGng~~d~~~~~~~~~~~a~~~glI~~~~~~~~~~~c~~~~---~~~~~~C~~~~~~~~~~~~~~in~ 295 (486)
... +||||||+||||+++|..+..++.+|+|.||+|++++++.+++.|.... ......|.+++....... +++|+
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~-~~~~~ 157 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCT-AKINI 157 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHH-hcCCH
Confidence 333 3999999999999999999999999999999999999999999996432 124567999888776666 78999
Q ss_pred ccccCCCCCCCCchhhhhhhcccCCCCCCCccccccccCCCCCch---hHHHhhcCCHHHHHHhccCCCCCcccccccch
Q 011426 296 YNIYAAPCNNSDGSAAATRHLMRLPHRPHNYKTLRRISGYDPCTE---KYAEIYYNRPDVQKALHANKTKIPYKWTACSE 372 (486)
Q Consensus 296 y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpc~~---~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~cs~ 372 (486)
|+++.+.|..... ..++|.. ..+..|||+++||+||||+... ..+|+.||.
T Consensus 158 ~~~~~~~~~~~~~-------------------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~ 211 (319)
T PLN02213 158 HHILTPDCDVTNV-------------------------TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNR 211 (319)
T ss_pred hhcccCcccCccC-------------------------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCc
Confidence 9998665632100 0124542 3678999999999999997421 127999999
Q ss_pred hhhccccCCCCChHHHHHHHhhCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCC-eEE
Q 011426 373 VLNRNWNDTDVSVLPIYRKMIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEG-LTF 451 (486)
Q Consensus 373 ~v~~~~~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~-Ltf 451 (486)
.|. +.....+..+.+..++..|+|||||+||.|++||+.|+++|+++|+|++.++|++|+.+++++||+|+|++ |||
T Consensus 212 ~v~--~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf 289 (319)
T PLN02213 212 TIP--YNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTF 289 (319)
T ss_pred ccc--cccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceE
Confidence 885 44333345555566666789999999999999999999999999999999999999999999999999986 999
Q ss_pred EEEcCceeccccCChHHHHHHHHHHHcCCCC
Q 011426 452 ATVRGAGHEVPLFKPRAALQLFKSFLRGDPL 482 (486)
Q Consensus 452 ~~V~gAGHmvP~dqP~~a~~mi~~fl~~~~l 482 (486)
++|+||||||| +||++|++||++||.+++|
T Consensus 290 ~~V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 290 ATIKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred EEEcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 99999999998 6999999999999999875
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-67 Score=530.89 Aligned_cols=367 Identities=25% Similarity=0.449 Sum_probs=299.0
Q ss_pred eEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCC-CCceecCCCCcccccceEEEeCCCCCCCCccc
Q 011426 80 ALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKT-ASGLYLNKLSWNTEANLLFLETPAGVGFSYTN 158 (486)
Q Consensus 80 ~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~-~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~ 158 (486)
.+|||+||++++|+++|+||||||||||||+ +|+|.|+||++|+.+ ++.--+||+||++++||||||||+||||||+.
T Consensus 86 ~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~ 164 (498)
T COG2939 86 FFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRAL 164 (498)
T ss_pred eEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccc
Confidence 4999999999999999999999999999999 599999999999998 43222699999999999999999999999983
Q ss_pred CCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCC--ceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecc-c
Q 011426 159 RSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGR--EVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNA-V 235 (486)
Q Consensus 159 ~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng-~ 235 (486)
.+.. +.+...+.+|++.|++.||+.||+|.+. |+||+||||||+|+|.||..|+++|......+||++++|||| +
T Consensus 165 ~~e~--~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~ 242 (498)
T COG2939 165 GDEK--KKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLW 242 (498)
T ss_pred cccc--ccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcc
Confidence 3332 2366778999999999999999999887 999999999999999999999998743334499999999999 9
Q ss_pred cCcccccccchhhhcc----cccCCHHHHHHHHHhccccC----------CCChHHHHHHHHHHHhhh---c--CC---C
Q 011426 236 TDNYYDNLGTVTYWWS----HAMISDKTYQQLINTCDFRR----------QKESDECESLYTYAMDQE---F--GN---I 293 (486)
Q Consensus 236 ~d~~~~~~~~~~~a~~----~glI~~~~~~~~~~~c~~~~----------~~~~~~C~~~~~~~~~~~---~--~~---i 293 (486)
|+|..++..+.++|.. ++..+.+.++++.+.|+... ......|..+...+.... . .+ +
T Consensus 243 t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~~~~ 322 (498)
T COG2939 243 TDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGGRLL 322 (498)
T ss_pred cChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhcccccccc
Confidence 9999999889988874 56677888888888886432 123456877766665432 1 24 7
Q ss_pred CcccccCCCCCCCCchhhhhhhcccCCCCCCCccccccccCCCCCch--hHHHhhcCCHHHHHHhccCCCCCcccccccc
Q 011426 294 DQYNIYAAPCNNSDGSAAATRHLMRLPHRPHNYKTLRRISGYDPCTE--KYAEIYYNRPDVQKALHANKTKIPYKWTACS 371 (486)
Q Consensus 294 n~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpc~~--~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~cs 371 (486)
|.|+++.. |..... . .-|++ .....|+|...+++++....+ .|..|+
T Consensus 323 n~y~~r~~-~~d~g~-----------~---------------~~~y~~~~~~ld~~~~~~~~~~~~~~~d----~~~~c~ 371 (498)
T COG2939 323 NVYDIREE-CRDPGL-----------G---------------GSCYDTLSTSLDYFNFDPEQEVNDPEVD----NISGCT 371 (498)
T ss_pred ccccchhh-cCCCCc-----------c---------------cccccceeeccccccccchhcccccccc----chhccc
Confidence 88888874 643210 0 12333 256678887778887775432 699999
Q ss_pred hhhhcccc----CCCCChHHHHHHHhhCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCcccc-----ceeE--cCeee
Q 011426 372 EVLNRNWN----DTDVSVLPIYRKMIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWY-----PWYV--KKQVG 440 (486)
Q Consensus 372 ~~v~~~~~----d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~-----~w~~--~~q~~ 440 (486)
.++...|. +.+......+..++.+++.+++|.||.|.+|++.|++.|..+|+|.+...|. +|.. ..+..
T Consensus 372 t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~ 451 (498)
T COG2939 372 TDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEM 451 (498)
T ss_pred hHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhc
Confidence 99987773 4456677778888889999999999999999999999999999999987654 3322 45677
Q ss_pred EEEEEeCCeEEEEEcCceeccccCChHHHHHHHHHHHcCC
Q 011426 441 GWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLRGD 480 (486)
Q Consensus 441 G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~fl~~~ 480 (486)
|-+++++|++|+.++.||||||.|+|+.+++|++.|+.+.
T Consensus 452 ~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 452 GGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred ccccccCCceEEEEecCcceeecCChHHHHHHHHHHHhhc
Confidence 7778889999999999999999999999999999999873
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-64 Score=478.93 Aligned_cols=393 Identities=24% Similarity=0.398 Sum_probs=313.8
Q ss_pred EeeeEEecCCCCceEEEEEEEecCC-CCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEE
Q 011426 67 FSGYVPVNKVPGRALFYWLTEATHN-PLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLF 145 (486)
Q Consensus 67 ~sGy~~v~~~~~~~lfy~f~es~~~-~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~ 145 (486)
--||++|.. +.++|||+|.+... ...+|+.|||+||||+||.++|+|+|+||...+ +.+|+.+|.+.|+|||
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 469999985 78999999998654 478999999999999999999999999999876 6689999999999999
Q ss_pred EeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcce
Q 011426 146 LETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPIN 225 (486)
Q Consensus 146 iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~in 225 (486)
||.|||+||||.+.++.| +++++++|.|+.+.|+.||..||+|+.+||||+-|||||+.++.+|..+.+..+.++-..|
T Consensus 77 vDnPVGaGfSyVdg~~~Y-~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~n 155 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAY-TTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLN 155 (414)
T ss_pred ecCCCcCceeeecCcccc-cccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeec
Confidence 999999999998888766 4689999999999999999999999999999999999999999999999998886555589
Q ss_pred eeEEEeeccccCcccccccchhhhcccccCCHHHHHHHHH---hcccc-C----CCChHHHHHHHHHHHhhhcCCCCccc
Q 011426 226 LKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDKTYQQLIN---TCDFR-R----QKESDECESLYTYAMDQEFGNIDQYN 297 (486)
Q Consensus 226 LkGi~IGng~~d~~~~~~~~~~~a~~~glI~~~~~~~~~~---~c~~~-~----~~~~~~C~~~~~~~~~~~~~~in~y~ 297 (486)
+.|+++|++||+|..-..++.+|+++.+++++...+.... .|... + ..++......-+.+.... .++|.||
T Consensus 156 f~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~s-n~VdfYN 234 (414)
T KOG1283|consen 156 FIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRES-NGVDFYN 234 (414)
T ss_pred ceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecc-cCcceee
Confidence 9999999999999999999999999999999877665543 33211 1 111222222222233333 5789999
Q ss_pred ccCCCCCCCCchhhhhhhcccCCCCCCCccccccccCC-CCCchhHHHhhcCCHHHHHHhccCCCCCcccccccchhhhc
Q 011426 298 IYAAPCNNSDGSAAATRHLMRLPHRPHNYKTLRRISGY-DPCTEKYAEIYYNRPDVQKALHANKTKIPYKWTACSEVLNR 376 (486)
Q Consensus 298 i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dpc~~~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~cs~~v~~ 376 (486)
+..+.-.+....... +.+. ++.. .++..... -+-..+.+..++|-| ||++|++.++.+ .|-.-+..|+.
T Consensus 235 il~~t~~d~~~~ss~--~~~~----~~~~-~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~--~wGgqsg~vFt 304 (414)
T KOG1283|consen 235 ILTKTLGDQYSLSSR--AAMT----PEEV-MRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGV--KWGGQSGDVFT 304 (414)
T ss_pred eeccCCCcchhhhhh--hhcc----hHHH-HHHHHhccCcchhHHHHHHHhccc-ccccccccCCCC--cccCcCCchHH
Confidence 987644332111100 0000 0000 00000000 011224688888877 899999987654 79999999987
Q ss_pred ccc-CCCCChHHHHHHHhhCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCcccc--ce---eEcCeeeEEEEEeCCeE
Q 011426 377 NWN-DTDVSVLPIYRKMIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWY--PW---YVKKQVGGWTEVYEGLT 450 (486)
Q Consensus 377 ~~~-d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~--~w---~~~~q~~G~~~~~~~Lt 450 (486)
+.. ++|.+++..+.+||+.|++|.||||++|+||++.|+++|+..|.|++...++ +| +.+-..+||.|+|+||.
T Consensus 305 ~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~ 384 (414)
T KOG1283|consen 305 KLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLS 384 (414)
T ss_pred HhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccce
Confidence 776 8999999999999999999999999999999999999999999999987554 44 23456799999999999
Q ss_pred EEEEcCceeccccCChHHHHHHHHHHHc
Q 011426 451 FATVRGAGHEVPLFKPRAALQLFKSFLR 478 (486)
Q Consensus 451 f~~V~gAGHmvP~dqP~~a~~mi~~fl~ 478 (486)
|..|..||||||.|+|++|.+|++.+..
T Consensus 385 f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 385 FFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred eEEeecccCcccCCCHHHHhhheeeccc
Confidence 9999999999999999999999987653
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.28 E-value=3.8e-10 Score=109.86 Aligned_cols=129 Identities=21% Similarity=0.260 Sum_probs=80.3
Q ss_pred EeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEE
Q 011426 67 FSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFL 146 (486)
Q Consensus 67 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~i 146 (486)
..++++++ +..+.|.-+. .+...|.||+++||||+++..+..+.+ .+.. +..+++.+
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~-----------~l~~------~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE-----------LLKE------EGREVIMY 59 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH-----------HHHh------cCCEEEEE
Confidence 35566665 3445554322 233468899999999998752222211 1111 14789999
Q ss_pred eCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCccee
Q 011426 147 ETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINL 226 (486)
Q Consensus 147 D~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inL 226 (486)
|.| |.|.|........ ..+.+..++++..+++. +..++++|+|+|+||..+..+|.... ..+
T Consensus 60 d~~-G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~p---------~~v 121 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDE-LWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKYG---------QHL 121 (288)
T ss_pred cCC-CCCCCCCCCcccc-cccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhCc---------ccc
Confidence 988 8888754322210 02455666666555542 22457999999999999988886532 238
Q ss_pred eEEEeecccc
Q 011426 227 KGIMVGNAVT 236 (486)
Q Consensus 227 kGi~IGng~~ 236 (486)
+++++.++..
T Consensus 122 ~~lvl~~~~~ 131 (288)
T TIGR01250 122 KGLIISSMLD 131 (288)
T ss_pred ceeeEecccc
Confidence 8999888764
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.26 E-value=1.8e-10 Score=110.45 Aligned_cols=116 Identities=22% Similarity=0.198 Sum_probs=78.7
Q ss_pred EEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCC
Q 011426 82 FYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSS 161 (486)
Q Consensus 82 fy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~ 161 (486)
+|..+.. ..++.|+||+++|.+|++.. +..+.+ .+ .+..+++.+|.| |.|.|......
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLD-----------VL-------TQRFHVVTYDHR-GTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHH-----------HH-------HhccEEEEEcCC-CCCCCCCCCcc
Confidence 4555432 23567999999999888776 332221 11 234699999988 88887543322
Q ss_pred CCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 162 DLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 162 ~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
. .+.++.++++.+++... ...+++|+|+|+||..+..+|.+..+. ++++++.+|+..+
T Consensus 60 ~---~~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~~---------v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 G---YSIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPER---------LLSLVLINAWSRP 117 (257)
T ss_pred c---CCHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChHH---------hHHheeecCCCCC
Confidence 2 25666777777766532 235799999999999999998765443 8889988876543
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.20 E-value=8.8e-10 Score=107.60 Aligned_cols=123 Identities=16% Similarity=0.075 Sum_probs=80.6
Q ss_pred eEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCC
Q 011426 70 YVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETP 149 (486)
Q Consensus 70 y~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~P 149 (486)
|++++ +.+++|- + ..+.+.|+||+++|.+|.+.. +..+.+ .+ .+..+++.+|.|
T Consensus 10 ~~~~~---~~~~~~~--~--~g~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~ 63 (278)
T TIGR03056 10 RVTVG---PFHWHVQ--D--MGPTAGPLLLLLHGTGASTHS-WRDLMP-----------PL-------ARSFRVVAPDLP 63 (278)
T ss_pred eeeEC---CEEEEEE--e--cCCCCCCeEEEEcCCCCCHHH-HHHHHH-----------HH-------hhCcEEEeecCC
Confidence 44554 4555543 2 244456999999999888776 332221 12 223689999988
Q ss_pred CCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEE
Q 011426 150 AGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGI 229 (486)
Q Consensus 150 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi 229 (486)
|-|.|....... .+.+..++++.++++. +..++++|+|+|+||..+..+|.+.. -.++++
T Consensus 64 -G~G~S~~~~~~~---~~~~~~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p---------~~v~~~ 123 (278)
T TIGR03056 64 -GHGFTRAPFRFR---FTLPSMAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGP---------VTPRMV 123 (278)
T ss_pred -CCCCCCCccccC---CCHHHHHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCC---------cccceE
Confidence 888775433222 2566777777777653 22357899999999988887775432 237899
Q ss_pred EeeccccCc
Q 011426 230 MVGNAVTDN 238 (486)
Q Consensus 230 ~IGng~~d~ 238 (486)
++.++..++
T Consensus 124 v~~~~~~~~ 132 (278)
T TIGR03056 124 VGINAALMP 132 (278)
T ss_pred EEEcCcccc
Confidence 999887654
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.19 E-value=1.2e-09 Score=108.48 Aligned_cols=125 Identities=16% Similarity=0.120 Sum_probs=84.7
Q ss_pred eeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEe
Q 011426 68 SGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLE 147 (486)
Q Consensus 68 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD 147 (486)
+=|++++ +.+++|.- . .+ ..|.||+++|.++++.+ +-.+.+ .+ .+..+++.+|
T Consensus 10 ~~~~~~~---~~~i~y~~--~--G~-~~~~vlllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~D 62 (294)
T PLN02824 10 TRTWRWK---GYNIRYQR--A--GT-SGPALVLVHGFGGNADH-WRKNTP-----------VL-------AKSHRVYAID 62 (294)
T ss_pred CceEEEc---CeEEEEEE--c--CC-CCCeEEEECCCCCChhH-HHHHHH-----------HH-------HhCCeEEEEc
Confidence 3366765 56677652 1 22 23789999999999988 444332 12 3446999999
Q ss_pred CCCCCCCCcccCCCCC---ccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcc
Q 011426 148 TPAGVGFSYTNRSSDL---LDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPI 224 (486)
Q Consensus 148 ~PvGtGfSy~~~~~~~---~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~i 224 (486)
.| |.|.|........ ...+.++.|+++.++|..+ ..++++|+|+|.||..+-.+|.+-.+.
T Consensus 63 lp-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~-------- 126 (294)
T PLN02824 63 LL-GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPEL-------- 126 (294)
T ss_pred CC-CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChhh--------
Confidence 88 8887753321100 0125567777777777643 246899999999999998888765544
Q ss_pred eeeEEEeecccc
Q 011426 225 NLKGIMVGNAVT 236 (486)
Q Consensus 225 nLkGi~IGng~~ 236 (486)
++++++.|+..
T Consensus 127 -v~~lili~~~~ 137 (294)
T PLN02824 127 -VRGVMLINISL 137 (294)
T ss_pred -eeEEEEECCCc
Confidence 89999999754
No 13
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.13 E-value=5.1e-09 Score=104.56 Aligned_cols=139 Identities=22% Similarity=0.235 Sum_probs=88.2
Q ss_pred cccccCccCCCCCceeEeeeEEecCCCCc--eEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCC
Q 011426 51 DRIASLPGQPKVSFQQFSGYVPVNKVPGR--ALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTAS 128 (486)
Q Consensus 51 ~~~~~lpg~~~~~~~~~sGy~~v~~~~~~--~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~ 128 (486)
.++.+||..| ..-.|++++...|. +++|.- ..++ +.|.||+++|.|+.+.. +..+.+
T Consensus 9 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~-w~~~~~----------- 67 (302)
T PRK00870 9 SRFENLPDYP-----FAPHYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYL-YRKMIP----------- 67 (302)
T ss_pred ccccCCcCCC-----CCceeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhh-HHHHHH-----------
Confidence 3566777544 35677888863333 577662 1223 56889999999888776 332221
Q ss_pred ceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHH
Q 011426 129 GLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQ 208 (486)
Q Consensus 129 ~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~ 208 (486)
.|.. +..+++.+|.| |.|.|-...... ..+.++.++++.++|+. +...++.|+|||+||..+-.
T Consensus 68 ~L~~------~gy~vi~~Dl~-G~G~S~~~~~~~--~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~ 131 (302)
T PRK00870 68 ILAA------AGHRVIAPDLI-GFGRSDKPTRRE--DYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIGLR 131 (302)
T ss_pred HHHh------CCCEEEEECCC-CCCCCCCCCCcc--cCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHHHH
Confidence 1111 24699999988 777663211111 12455666666666543 22458999999999999888
Q ss_pred HHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 209 LAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 209 la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
+|.+-.+. ++++++.++.
T Consensus 132 ~a~~~p~~---------v~~lvl~~~~ 149 (302)
T PRK00870 132 LAAEHPDR---------FARLVVANTG 149 (302)
T ss_pred HHHhChhh---------eeEEEEeCCC
Confidence 88754333 8899988764
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=99.12 E-value=6e-09 Score=102.40 Aligned_cols=123 Identities=16% Similarity=0.194 Sum_probs=81.5
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCccc-ccceEEEeCCCCCCCCc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNT-EANLLFLETPAGVGFSY 156 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~-~a~~l~iD~PvGtGfSy 156 (486)
|..|+|.+++.. +..+|+||.++|..++|.. +-.+.+ .+.+ ...++-+|.| |.|.|-
T Consensus 10 g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D~~-G~G~S~ 67 (276)
T PHA02857 10 NDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHDHI-GHGRSN 67 (276)
T ss_pred CCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEccCC-CCCCCC
Confidence 678999888764 3456899999999777766 422221 1222 3589999988 888775
Q ss_pred ccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 157 TNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
... ....+-....+|+.+++..+-+.++ ..+++|+|+|+||.-+..+|.+-. -+++|+++.+|.+
T Consensus 68 ~~~---~~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~~p---------~~i~~lil~~p~~ 132 (276)
T PHA02857 68 GEK---MMIDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYKNP---------NLFTAMILMSPLV 132 (276)
T ss_pred Ccc---CCcCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHhCc---------cccceEEEecccc
Confidence 321 1111334456777777765544443 568999999999987766664321 2389999999876
Q ss_pred C
Q 011426 237 D 237 (486)
Q Consensus 237 d 237 (486)
+
T Consensus 133 ~ 133 (276)
T PHA02857 133 N 133 (276)
T ss_pred c
Confidence 5
No 15
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.09 E-value=7.7e-09 Score=104.67 Aligned_cols=139 Identities=15% Similarity=0.162 Sum_probs=85.9
Q ss_pred eeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCccc-ccce
Q 011426 65 QQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNT-EANL 143 (486)
Q Consensus 65 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~-~a~~ 143 (486)
+...+++...+ |..|+|..+.-......+|+||+++|..+.++..+-.+ ...+.+ -.+|
T Consensus 31 ~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~------------------~~~L~~~Gy~V 90 (330)
T PLN02298 31 KGSKSFFTSPR--GLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQST------------------AIFLAQMGFAC 90 (330)
T ss_pred ccccceEEcCC--CCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHH------------------HHHHHhCCCEE
Confidence 34567777653 77899875533222235689999999954433211000 011232 4799
Q ss_pred EEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCc
Q 011426 144 LFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHP 223 (486)
Q Consensus 144 l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~ 223 (486)
+.+|.| |.|.|-.. ..+ ..+.+..++|+..+++..-.. .++...+++|+|+|+||..+..++..-.
T Consensus 91 ~~~D~r-GhG~S~~~--~~~-~~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~~p--------- 156 (330)
T PLN02298 91 FALDLE-GHGRSEGL--RAY-VPNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLANP--------- 156 (330)
T ss_pred EEecCC-CCCCCCCc--ccc-CCCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhcCc---------
Confidence 999999 77776422 121 124566788888888755432 2333458999999999987766554221
Q ss_pred ceeeEEEeeccccC
Q 011426 224 INLKGIMVGNAVTD 237 (486)
Q Consensus 224 inLkGi~IGng~~d 237 (486)
-.++|+++.+|+.+
T Consensus 157 ~~v~~lvl~~~~~~ 170 (330)
T PLN02298 157 EGFDGAVLVAPMCK 170 (330)
T ss_pred ccceeEEEeccccc
Confidence 23899999998764
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.09 E-value=3.3e-09 Score=105.36 Aligned_cols=123 Identities=15% Similarity=0.150 Sum_probs=75.5
Q ss_pred eEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEE
Q 011426 66 QFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLF 145 (486)
Q Consensus 66 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~ 145 (486)
..+.+++++ +..++|.- . . ..|.||+++|.|..+.. +-.+.+ .+.+..+++.
T Consensus 14 ~~~~~~~~~---~~~i~y~~---~-G--~~~~iv~lHG~~~~~~~-~~~~~~------------------~l~~~~~vi~ 65 (286)
T PRK03204 14 FESRWFDSS---RGRIHYID---E-G--TGPPILLCHGNPTWSFL-YRDIIV------------------ALRDRFRCVA 65 (286)
T ss_pred ccceEEEcC---CcEEEEEE---C-C--CCCEEEEECCCCccHHH-HHHHHH------------------HHhCCcEEEE
Confidence 345678886 56677652 1 2 34789999999865544 321111 1233479999
Q ss_pred EeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcce
Q 011426 146 LETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPIN 225 (486)
Q Consensus 146 iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~in 225 (486)
+|.| |.|.|-.....+ .+.+..++++..+++. . ...+++|+|+|+||..+-.+|..-.+ .
T Consensus 66 ~D~~-G~G~S~~~~~~~---~~~~~~~~~~~~~~~~----~---~~~~~~lvG~S~Gg~va~~~a~~~p~---------~ 125 (286)
T PRK03204 66 PDYL-GFGLSERPSGFG---YQIDEHARVIGEFVDH----L---GLDRYLSMGQDWGGPISMAVAVERAD---------R 125 (286)
T ss_pred ECCC-CCCCCCCCCccc---cCHHHHHHHHHHHHHH----h---CCCCEEEEEECccHHHHHHHHHhChh---------h
Confidence 9988 777663222111 1444555555555543 2 24579999999999876666543322 3
Q ss_pred eeEEEeecccc
Q 011426 226 LKGIMVGNAVT 236 (486)
Q Consensus 226 LkGi~IGng~~ 236 (486)
+++++++++..
T Consensus 126 v~~lvl~~~~~ 136 (286)
T PRK03204 126 VRGVVLGNTWF 136 (286)
T ss_pred eeEEEEECccc
Confidence 89999988753
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.06 E-value=6.5e-09 Score=100.52 Aligned_cols=104 Identities=17% Similarity=0.182 Sum_probs=76.1
Q ss_pred CCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcH
Q 011426 90 HNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDG 169 (486)
Q Consensus 90 ~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~ 169 (486)
.++.+.|.||+++|.+|.+.. +..+.+ . +.+..+++.+|.| |-|.|... .. .+.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D~~-G~G~s~~~--~~---~~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR-----------D-------LVNDHDIIQVDMR-NHGLSPRD--PV---MNYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH-----------H-------HhhCCeEEEECCC-CCCCCCCC--CC---CCHH
Confidence 456778999999999999877 443332 1 2235799999988 77776532 22 2566
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecc
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNA 234 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 234 (486)
+.++|+.++|..+ ..++++|+|+|.||..+..+|.+..+. ++++++.++
T Consensus 66 ~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~~---------v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPDR---------IDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHhh---------cceEEEEec
Confidence 7788888888752 235799999999999999998765544 889888764
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.04 E-value=1.6e-08 Score=103.27 Aligned_cols=127 Identities=14% Similarity=0.207 Sum_probs=81.1
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCccc-ccceEEEeCCCCCCCCc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNT-EANLLFLETPAGVGFSY 156 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~-~a~~l~iD~PvGtGfSy 156 (486)
|..+||...... +.+.+|+||+++|..+.++..+-.+.+ .+.+ -.+++-+|.| |.|.|-
T Consensus 71 g~~l~~~~~~p~-~~~~~~~iv~lHG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~D~~-G~G~S~ 130 (349)
T PLN02385 71 GVEIFSKSWLPE-NSRPKAAVCFCHGYGDTCTFFFEGIAR------------------KIASSGYGVFAMDYP-GFGLSE 130 (349)
T ss_pred CCEEEEEEEecC-CCCCCeEEEEECCCCCccchHHHHHHH------------------HHHhCCCEEEEecCC-CCCCCC
Confidence 678888765432 224569999999987765541111100 1222 3689999998 777774
Q ss_pred ccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 157 TNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
... .+. .+-+..++|+.++++.. ...+++...+++|+|+|+||..+..+|.+-.+ .++|+++.+|..
T Consensus 131 ~~~--~~~-~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~---------~v~glVLi~p~~ 197 (349)
T PLN02385 131 GLH--GYI-PSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN---------AWDGAILVAPMC 197 (349)
T ss_pred CCC--CCc-CCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCcc---------hhhheeEecccc
Confidence 321 221 24566778887777653 33344556689999999999887776654222 289999999865
Q ss_pred C
Q 011426 237 D 237 (486)
Q Consensus 237 d 237 (486)
.
T Consensus 198 ~ 198 (349)
T PLN02385 198 K 198 (349)
T ss_pred c
Confidence 3
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.03 E-value=3e-08 Score=97.38 Aligned_cols=60 Identities=22% Similarity=0.165 Sum_probs=51.0
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~ 474 (486)
-..+||+..|..|.+++..-.+.+...+. +..++.|.+|||+++.++|+...++|.
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 35899999999999999876666655542 456788999999999999999999999
Q ss_pred HHHc
Q 011426 475 SFLR 478 (486)
Q Consensus 475 ~fl~ 478 (486)
+|+.
T Consensus 278 ~fl~ 281 (282)
T TIGR03343 278 DFLR 281 (282)
T ss_pred HHhh
Confidence 9985
No 20
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.02 E-value=1.3e-08 Score=105.04 Aligned_cols=133 Identities=15% Similarity=0.090 Sum_probs=85.4
Q ss_pred CCceeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCccccc
Q 011426 62 VSFQQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEA 141 (486)
Q Consensus 62 ~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a 141 (486)
.+.++-+|+.... ++-.+||. +..+...|.||.++|.|+.+.. +-.+.+ .+ .+..
T Consensus 100 ~~~~~~~~~~~~~--~~~~~~y~----~~G~~~~~~ivllHG~~~~~~~-w~~~~~-----------~L-------~~~~ 154 (383)
T PLN03084 100 FGLKMGAQSQASS--DLFRWFCV----ESGSNNNPPVLLIHGFPSQAYS-YRKVLP-----------VL-------SKNY 154 (383)
T ss_pred ccccccceeEEcC--CceEEEEE----ecCCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hcCC
Confidence 4566667776643 25667766 2344457899999999988776 332222 12 2346
Q ss_pred ceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCC
Q 011426 142 NLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSK 221 (486)
Q Consensus 142 ~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~ 221 (486)
+++-+|.| |.|+|.......-...+.++.++++..+|+.. ...+++|+|+|+||..+-.+|.+-.+.
T Consensus 155 ~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P~~----- 221 (383)
T PLN03084 155 HAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHPDK----- 221 (383)
T ss_pred EEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhChHh-----
Confidence 99999988 88877543221000125566777777777642 235799999999997665555543332
Q ss_pred CcceeeEEEeecccc
Q 011426 222 HPINLKGIMVGNAVT 236 (486)
Q Consensus 222 ~~inLkGi~IGng~~ 236 (486)
++++++.|+..
T Consensus 222 ----v~~lILi~~~~ 232 (383)
T PLN03084 222 ----IKKLILLNPPL 232 (383)
T ss_pred ----hcEEEEECCCC
Confidence 89999999764
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.99 E-value=9.8e-09 Score=102.05 Aligned_cols=120 Identities=20% Similarity=0.167 Sum_probs=81.8
Q ss_pred eEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCC
Q 011426 70 YVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETP 149 (486)
Q Consensus 70 y~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~P 149 (486)
+++++ |.+++|.-. . +.|.||+++|.|+++.. +-.+.+ .| .+...++-+|.|
T Consensus 11 ~~~~~---g~~i~y~~~----G--~g~~vvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~via~D~~ 62 (295)
T PRK03592 11 RVEVL---GSRMAYIET----G--EGDPIVFLHGNPTSSYL-WRNIIP-----------HL-------AGLGRCLAPDLI 62 (295)
T ss_pred EEEEC---CEEEEEEEe----C--CCCEEEEECCCCCCHHH-HHHHHH-----------HH-------hhCCEEEEEcCC
Confidence 45554 566777622 2 34789999999998887 433222 12 233489999988
Q ss_pred CCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEE
Q 011426 150 AGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGI 229 (486)
Q Consensus 150 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi 229 (486)
|-|.|... ...+ +.+..|+++..+++.. ...+++|+|+|.||..+-.+|.+..+. ++++
T Consensus 63 -G~G~S~~~-~~~~---~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~~---------v~~l 121 (295)
T PRK03592 63 -GMGASDKP-DIDY---TFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPDR---------VRGI 121 (295)
T ss_pred -CCCCCCCC-CCCC---CHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChhh---------eeEE
Confidence 77777432 2222 5566777777776642 246899999999999988888766544 8999
Q ss_pred EeeccccCc
Q 011426 230 MVGNAVTDN 238 (486)
Q Consensus 230 ~IGng~~d~ 238 (486)
++.|+...+
T Consensus 122 il~~~~~~~ 130 (295)
T PRK03592 122 AFMEAIVRP 130 (295)
T ss_pred EEECCCCCC
Confidence 999985443
No 22
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.99 E-value=5.1e-08 Score=100.09 Aligned_cols=127 Identities=15% Similarity=0.085 Sum_probs=78.1
Q ss_pred EeeeEEecCCCCc-eEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEE
Q 011426 67 FSGYVPVNKVPGR-ALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLF 145 (486)
Q Consensus 67 ~sGy~~v~~~~~~-~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~ 145 (486)
-..++..+ |. +++|.-.-+.....+.|.||.++|.|+.+.. +..+.+ ...+...++-
T Consensus 62 ~~~~~~~~---g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~~~~------------------~L~~~~~via 119 (360)
T PLN02679 62 RCKKWKWK---GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRRNIG------------------VLAKNYTVYA 119 (360)
T ss_pred cCceEEEC---CceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHHHHH------------------HHhcCCEEEE
Confidence 45566664 34 6777632210001144789999999988877 432221 1123468999
Q ss_pred EeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHH-HHHhcCCCCcc
Q 011426 146 LETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREI-MIHNSKSKHPI 224 (486)
Q Consensus 146 iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i-~~~n~~~~~~i 224 (486)
+|.| |.|.|-...... .+.+..++++.++|+.. ...+++|+|+|+||..+-.+|.+- .+.
T Consensus 120 ~Dl~-G~G~S~~~~~~~---~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~~P~r-------- 180 (360)
T PLN02679 120 IDLL-GFGASDKPPGFS---YTMETWAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASESTRDL-------- 180 (360)
T ss_pred ECCC-CCCCCCCCCCcc---ccHHHHHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHhcChhh--------
Confidence 9998 666663221112 25566777777777642 235899999999997665555321 222
Q ss_pred eeeEEEeeccc
Q 011426 225 NLKGIMVGNAV 235 (486)
Q Consensus 225 nLkGi~IGng~ 235 (486)
++|+++.|+.
T Consensus 181 -V~~LVLi~~~ 190 (360)
T PLN02679 181 -VRGLVLLNCA 190 (360)
T ss_pred -cCEEEEECCc
Confidence 8999999875
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.97 E-value=2.9e-08 Score=97.74 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=78.1
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
+..+.|+..+. + +..|.||+++|-++.+.. +..+.+ .+ .+..+++.+|.| |-|.|-.
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIE-----------AL-------DPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHH-----------Hh-------ccCceEEEECCC-CCCCCCC
Confidence 56788886432 2 345778999997777666 332222 11 235699999988 7777642
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
. ... .+.+..++++.++|... .-++++|+|+|+||..+-.+|.+-.+. ++++++.|+...
T Consensus 68 ~-~~~---~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~~---------v~~lvl~~~~~~ 127 (276)
T TIGR02240 68 P-RHP---YRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPER---------CKKLILAATAAG 127 (276)
T ss_pred C-CCc---CcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHHH---------hhheEEeccCCc
Confidence 2 122 24455666666666542 235799999999999888888765543 999999998754
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.88 E-value=4.5e-08 Score=92.87 Aligned_cols=60 Identities=30% Similarity=0.419 Sum_probs=50.7
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~ 474 (486)
-..+|++.+|+.|.++|....+.+.+.+. +.++..+.++||+++.++|+...+.++
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~ 247 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVP------------------------GARFAEIRGAGHIPCVEQPEAFNAALR 247 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCC------------------------CceEEEECCCCCcccccChHHHHHHHH
Confidence 45899999999999999887776665542 346778899999999999999999999
Q ss_pred HHHc
Q 011426 475 SFLR 478 (486)
Q Consensus 475 ~fl~ 478 (486)
+|+.
T Consensus 248 ~fl~ 251 (251)
T TIGR02427 248 DFLR 251 (251)
T ss_pred HHhC
Confidence 9974
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.87 E-value=2.5e-08 Score=92.80 Aligned_cols=104 Identities=23% Similarity=0.237 Sum_probs=71.9
Q ss_pred eEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHH
Q 011426 98 VVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQ 177 (486)
Q Consensus 98 ~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 177 (486)
||+++|.+|.+.. +..+.+ .+ .+..+++.+|.| |.|.|-.... +...+.++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------AL-------ARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HH-------HTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 6899999999976 443333 12 145689999988 8887764432 111255566777666
Q ss_pred HHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 178 FLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 178 fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
+|+. .. .++++|+|+|+||..+..++.+..+. ++|+++.+|.....
T Consensus 59 ~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~---------v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 59 LLDA----LG---IKKVILVGHSMGGMIALRLAARYPDR---------VKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHH----TT---TSSEEEEEETHHHHHHHHHHHHSGGG---------EEEEEEESESSSHH
T ss_pred cccc----cc---cccccccccccccccccccccccccc---------cccceeeccccccc
Confidence 6653 32 26899999999999998888764443 99999999887543
No 26
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.86 E-value=1.5e-07 Score=96.47 Aligned_cols=114 Identities=20% Similarity=0.194 Sum_probs=73.4
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
+..++|. +..+.+.|.||+++|.+|++.. +..+.+ .| .+..+++-+|.| |.|.|-.
T Consensus 118 ~~~i~~~----~~g~~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-g~G~s~~ 173 (371)
T PRK14875 118 GRTVRYL----RLGEGDGTPVVLIHGFGGDLNN-WLFNHA-----------AL-------AAGRPVIALDLP-GHGASSK 173 (371)
T ss_pred CcEEEEe----cccCCCCCeEEEECCCCCccch-HHHHHH-----------HH-------hcCCEEEEEcCC-CCCCCCC
Confidence 4456654 2233456889999999998876 343332 11 122689999988 8887732
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
.... .+.++.++++..+++ .. ...+++|+|+|+||..+..+|..-.+ .++++++.+|.
T Consensus 174 ~~~~----~~~~~~~~~~~~~~~----~~---~~~~~~lvG~S~Gg~~a~~~a~~~~~---------~v~~lv~~~~~ 231 (371)
T PRK14875 174 AVGA----GSLDELAAAVLAFLD----AL---GIERAHLVGHSMGGAVALRLAARAPQ---------RVASLTLIAPA 231 (371)
T ss_pred CCCC----CCHHHHHHHHHHHHH----hc---CCccEEEEeechHHHHHHHHHHhCch---------heeEEEEECcC
Confidence 2111 245555666555554 32 34579999999999999888865322 37888887764
No 27
>PLN02578 hydrolase
Probab=98.85 E-value=2.2e-07 Score=95.11 Aligned_cols=112 Identities=14% Similarity=0.141 Sum_probs=74.9
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
+.+++|.-. + +.|.||.++|-++.+.. +..+.+ . +.+..+++.+|.| |.|.|-.
T Consensus 75 ~~~i~Y~~~----g--~g~~vvliHG~~~~~~~-w~~~~~-----------~-------l~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQ----G--EGLPIVLIHGFGASAFH-WRYNIP-----------E-------LAKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEc----C--CCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCEEEEECCC-CCCCCCC
Confidence 566777632 2 23557899988776554 322111 1 1235789999999 7776643
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
. ... .+.+..++++.+|++... ..+++|+|+|+||..+..+|.+..+. ++++++.|+.
T Consensus 129 ~-~~~---~~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~~---------v~~lvLv~~~ 186 (354)
T PLN02578 129 A-LIE---YDAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPEL---------VAGVALLNSA 186 (354)
T ss_pred c-ccc---cCHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChHh---------cceEEEECCC
Confidence 2 122 255666778777777542 36899999999999888888766554 8999998874
No 28
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.83 E-value=1.7e-07 Score=93.95 Aligned_cols=126 Identities=17% Similarity=0.268 Sum_probs=79.1
Q ss_pred eeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEe
Q 011426 68 SGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLE 147 (486)
Q Consensus 68 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD 147 (486)
.+|+.+.+ +.+|+|.-. .+.+.|.||+++|+||.++.. ... . .+ + .+..+++.+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~----g~~~~~~lvllHG~~~~~~~~-~~~-~-----------~~--~----~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS----GNPDGKPVVFLHGGPGSGTDP-GCR-R-----------FF--D----PETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEEC----cCCCCCEEEEECCCCCCCCCH-HHH-h-----------cc--C----ccCCEEEEEC
Confidence 57888875 677888632 222245578999999986541 110 0 00 0 1357999999
Q ss_pred CCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceee
Q 011426 148 TPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLK 227 (486)
Q Consensus 148 ~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLk 227 (486)
.| |.|.|...... . ..+.++.++++..+++ .. ...+++++|+||||..+..+|.+-.+. ++
T Consensus 61 ~~-G~G~S~~~~~~-~-~~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~---------v~ 121 (306)
T TIGR01249 61 QR-GCGKSTPHACL-E-ENTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPEV---------VT 121 (306)
T ss_pred CC-CCCCCCCCCCc-c-cCCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChHh---------hh
Confidence 88 88877532211 1 1234455555554443 22 235799999999999888887765443 78
Q ss_pred EEEeeccccC
Q 011426 228 GIMVGNAVTD 237 (486)
Q Consensus 228 Gi~IGng~~d 237 (486)
++++.+..+.
T Consensus 122 ~lvl~~~~~~ 131 (306)
T TIGR01249 122 GLVLRGIFLL 131 (306)
T ss_pred hheeeccccC
Confidence 8888877654
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.78 E-value=2.1e-07 Score=88.02 Aligned_cols=59 Identities=19% Similarity=0.135 Sum_probs=49.5
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~ 474 (486)
-..+|||.+|..|.+++....+.+-+.+. +-++..+.++||+++.++|+...+.|.
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPYLDKLAP------------------------HSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 35899999999999999887776655442 345678899999999999999999999
Q ss_pred HHH
Q 011426 475 SFL 477 (486)
Q Consensus 475 ~fl 477 (486)
+||
T Consensus 243 ~fi 245 (245)
T TIGR01738 243 AFK 245 (245)
T ss_pred hhC
Confidence 986
No 30
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.75 E-value=1.3e-07 Score=91.79 Aligned_cols=60 Identities=13% Similarity=0.070 Sum_probs=50.0
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~ 474 (486)
-..+|||.+|..|.++|....+...+.+ .+..++.+.++||+++.++|+...+.+.
T Consensus 195 i~~P~lii~G~~D~~~~~~~~~~~~~~i------------------------~~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 195 VSMPFLRLYGYLDGLVPRKVVPMLDKLW------------------------PHSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred cCCCeEEEecCCCccCCHHHHHHHHHhC------------------------CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 4599999999999999987666544443 2557889999999999999999999999
Q ss_pred HHHc
Q 011426 475 SFLR 478 (486)
Q Consensus 475 ~fl~ 478 (486)
+|-.
T Consensus 251 ~~~~ 254 (256)
T PRK10349 251 ALKQ 254 (256)
T ss_pred HHhc
Confidence 9864
No 31
>PRK06489 hypothetical protein; Provisional
Probab=98.75 E-value=1.3e-06 Score=89.64 Aligned_cols=142 Identities=13% Similarity=0.098 Sum_probs=79.2
Q ss_pred ceeEeeeEEecCCCCceEEEEEEEec---CCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCcee-cCCCCccc
Q 011426 64 FQQFSGYVPVNKVPGRALFYWLTEAT---HNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLY-LNKLSWNT 139 (486)
Q Consensus 64 ~~~~sGy~~v~~~~~~~lfy~f~es~---~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~-~n~~sw~~ 139 (486)
+...+|. .++ |.+++|.-+-.. .++++.|.||.++|++|.+.. +- .|...+ .+. ....--.+
T Consensus 39 ~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~-----~~~~~~----~l~~~~~~l~~~ 104 (360)
T PRK06489 39 FTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FL-----SPTFAG----ELFGPGQPLDAS 104 (360)
T ss_pred eeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hc-----cchhHH----HhcCCCCccccc
Confidence 5566775 333 567877743210 012236889999999997765 21 000000 000 00001135
Q ss_pred ccceEEEeCCCCCCCCcccCCC---CCccCCcHHHHHHHHHHHHHHHHhCCCCCCCce-EEEccccccccHHHHHHHHHH
Q 011426 140 EANLLFLETPAGVGFSYTNRSS---DLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREV-YLTGESYAGHYVPQLAREIMI 215 (486)
Q Consensus 140 ~a~~l~iD~PvGtGfSy~~~~~---~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~-yi~GESYgG~yvp~la~~i~~ 215 (486)
..++|.+|.| |.|.|-..... .....+.++.++++..++.+ . +.-.++ +|+|+|+||..+-.+|.+-.+
T Consensus 105 ~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~---~---lgi~~~~~lvG~SmGG~vAl~~A~~~P~ 177 (360)
T PRK06489 105 KYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE---G---LGVKHLRLILGTSMGGMHAWMWGEKYPD 177 (360)
T ss_pred CCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH---h---cCCCceeEEEEECHHHHHHHHHHHhCch
Confidence 5799999998 88877422111 00012444555555554432 1 222355 589999999988888876555
Q ss_pred HhcCCCCcceeeEEEeeccc
Q 011426 216 HNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 216 ~n~~~~~~inLkGi~IGng~ 235 (486)
. ++++++.++.
T Consensus 178 ~---------V~~LVLi~s~ 188 (360)
T PRK06489 178 F---------MDALMPMASQ 188 (360)
T ss_pred h---------hheeeeeccC
Confidence 4 8888887764
No 32
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.73 E-value=5.4e-07 Score=93.54 Aligned_cols=127 Identities=20% Similarity=0.151 Sum_probs=82.4
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
+..+|++.++.. ..+.+|+||+++|.++.+.. +-.+.+ .+. .+-.+++-+|.| |-|.|-.
T Consensus 120 ~~~l~~~~~~p~-~~~~~~~Vl~lHG~~~~~~~-~~~~a~-----------~L~------~~Gy~V~~~D~r-GhG~S~~ 179 (395)
T PLN02652 120 RNALFCRSWAPA-AGEMRGILIIIHGLNEHSGR-YLHFAK-----------QLT------SCGFGVYAMDWI-GHGGSDG 179 (395)
T ss_pred CCEEEEEEecCC-CCCCceEEEEECCchHHHHH-HHHHHH-----------HHH------HCCCEEEEeCCC-CCCCCCC
Confidence 457888877653 23457899999999887665 322221 111 124589999988 6666643
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
. ..+ ..+.+..++|+..+++..-..+| ..+++|+|+|+||..+..++. +.+ .+-.++|+++.+|+++
T Consensus 180 ~--~~~-~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~---~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 180 L--HGY-VPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS---IEDKLEGIVLTSPALR 246 (395)
T ss_pred C--CCC-CcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC---cccccceEEEECcccc
Confidence 2 222 12455667888888887666665 458999999999987765442 111 0124899999988764
No 33
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.73 E-value=1.1e-06 Score=93.10 Aligned_cols=133 Identities=13% Similarity=0.080 Sum_probs=82.9
Q ss_pred ceeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhh-hcccCCeEEcCCCCceecCCCCcccccc
Q 011426 64 FQQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGA-SEEIGPFRINKTASGLYLNKLSWNTEAN 142 (486)
Q Consensus 64 ~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~-~~E~GP~~~~~~~~~l~~n~~sw~~~a~ 142 (486)
.+...-|+..+ +..|||+..... ++...|.||+++|.+|.+.. +.. +.+ .+.. .+.+...
T Consensus 174 ~~~~~~~~~~~---~~~l~~~~~gp~-~~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yr 234 (481)
T PLN03087 174 CKFCTSWLSSS---NESLFVHVQQPK-DNKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYR 234 (481)
T ss_pred cceeeeeEeeC---CeEEEEEEecCC-CCCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCE
Confidence 34455777765 467988865432 22234789999999999887 331 100 0111 1345679
Q ss_pred eEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCC
Q 011426 143 LLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKH 222 (486)
Q Consensus 143 ~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~ 222 (486)
++.+|.| |.|.|-...... .+.++.++++. +.+.+.. ...+++|+|+|+||..+-.+|.+-.+.
T Consensus 235 Via~Dl~-G~G~S~~p~~~~---ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe~------ 298 (481)
T PLN03087 235 LFAVDLL-GFGRSPKPADSL---YTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPGA------ 298 (481)
T ss_pred EEEECCC-CCCCCcCCCCCc---CCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChHh------
Confidence 9999998 666653221121 24445555542 1233332 346899999999999998888765443
Q ss_pred cceeeEEEeecc
Q 011426 223 PINLKGIMVGNA 234 (486)
Q Consensus 223 ~inLkGi~IGng 234 (486)
++++++.++
T Consensus 299 ---V~~LVLi~~ 307 (481)
T PLN03087 299 ---VKSLTLLAP 307 (481)
T ss_pred ---ccEEEEECC
Confidence 889998886
No 34
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.73 E-value=1.2e-06 Score=86.72 Aligned_cols=138 Identities=17% Similarity=0.255 Sum_probs=90.8
Q ss_pred CCceeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCccccc
Q 011426 62 VSFQQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEA 141 (486)
Q Consensus 62 ~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a 141 (486)
+..+..+-|+.+.+ +... |.++-...+++++-++.++|= |++++.+ ..|=.+..+.-
T Consensus 61 ~~v~~~~~~v~i~~--~~~i--w~~~~~~~~~~~~plVliHGy-GAg~g~f------------------~~Nf~~La~~~ 117 (365)
T KOG4409|consen 61 VPVPYSKKYVRIPN--GIEI--WTITVSNESANKTPLVLIHGY-GAGLGLF------------------FRNFDDLAKIR 117 (365)
T ss_pred cCCCcceeeeecCC--Ccee--EEEeecccccCCCcEEEEecc-chhHHHH------------------HHhhhhhhhcC
Confidence 33445566777763 2233 333333445777788888874 4443312 23444555688
Q ss_pred ceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCC
Q 011426 142 NLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSK 221 (486)
Q Consensus 142 ~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~ 221 (486)
||-.||.| |-|+|- ... +. .+.+.+-+.+.+-+++|..+.. =.+.+|+|||+||..+...|..-.++
T Consensus 118 ~vyaiDll-G~G~SS--RP~-F~-~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer----- 184 (365)
T KOG4409|consen 118 NVYAIDLL-GFGRSS--RPK-FS-IDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER----- 184 (365)
T ss_pred ceEEeccc-CCCCCC--CCC-CC-CCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh-----
Confidence 99999988 666653 222 21 1333445588999999998764 45899999999999988888776665
Q ss_pred CcceeeEEEeeccccCcc
Q 011426 222 HPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 222 ~~inLkGi~IGng~~d~~ 239 (486)
++-+++.+||--++
T Consensus 185 ----V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 ----VEKLILVSPWGFPE 198 (365)
T ss_pred ----hceEEEeccccccc
Confidence 88899999986554
No 35
>PRK10749 lysophospholipase L2; Provisional
Probab=98.73 E-value=4.7e-07 Score=91.80 Aligned_cols=126 Identities=16% Similarity=0.095 Sum_probs=80.1
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
|.+++|..+.. +..+|+||.++|-.+.+.. +.-+.. . +. .+-.+++-+|.| |-|.|-.
T Consensus 40 g~~l~~~~~~~---~~~~~~vll~HG~~~~~~~-y~~~~~---~--------l~------~~g~~v~~~D~~-G~G~S~~ 97 (330)
T PRK10749 40 DIPIRFVRFRA---PHHDRVVVICPGRIESYVK-YAELAY---D--------LF------HLGYDVLIIDHR-GQGRSGR 97 (330)
T ss_pred CCEEEEEEccC---CCCCcEEEEECCccchHHH-HHHHHH---H--------HH------HCCCeEEEEcCC-CCCCCCC
Confidence 66799887653 2456899999998665544 321111 0 11 123589999988 8887743
Q ss_pred cCCCCC--ccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 158 NRSSDL--LDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 158 ~~~~~~--~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
...... ...+-+..++|+..+++.....++ ..+++++|+|+||..+-.+|.+- . -.++|+++.+|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~---p------~~v~~lvl~~p~ 165 (330)
T PRK10749 98 LLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRH---P------GVFDAIALCAPM 165 (330)
T ss_pred CCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhC---C------CCcceEEEECch
Confidence 211100 012455677788887776655443 56899999999998776666532 1 227999999887
Q ss_pred cC
Q 011426 236 TD 237 (486)
Q Consensus 236 ~d 237 (486)
..
T Consensus 166 ~~ 167 (330)
T PRK10749 166 FG 167 (330)
T ss_pred hc
Confidence 54
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.66 E-value=5.2e-07 Score=85.20 Aligned_cols=105 Identities=23% Similarity=0.301 Sum_probs=66.9
Q ss_pred CCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHH
Q 011426 95 KPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKD 174 (486)
Q Consensus 95 ~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~ 174 (486)
+|+||+++|.+|.+.. +-.+.+ .+ + +..+++-+|.| |.|.|..... ....+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L-----~--~~~~v~~~d~~-g~G~s~~~~~--~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LL-----G--PHFRCLAIDLP-GHGSSQSPDE--IERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hh-----c--ccCeEEEEcCC-CCCCCCCCCc--cChhhHHHHHHH
Confidence 4889999999988776 322211 12 1 34689999988 7777743211 111234445555
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 175 SLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 175 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
+ +..+.+.. ..++++|+|+|+||..+..+|.+..+ .++++++.++..
T Consensus 59 ~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~---------~v~~lil~~~~~ 105 (251)
T TIGR03695 59 I---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE---------RVQGLILESGSP 105 (251)
T ss_pred H---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch---------heeeeEEecCCC
Confidence 2 33333333 25689999999999999888876533 388999887753
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.66 E-value=1.9e-06 Score=89.86 Aligned_cols=119 Identities=11% Similarity=0.092 Sum_probs=74.4
Q ss_pred eEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccC
Q 011426 80 ALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNR 159 (486)
Q Consensus 80 ~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~ 159 (486)
.+.+..++. +.+.|.||+++|.++.+.. +.... ..+.+..+++-+|.| |.|.|-.
T Consensus 93 ~~~~~~~~~---~~~~p~vvllHG~~~~~~~-~~~~~------------------~~L~~~~~vi~~D~r-G~G~S~~-- 147 (402)
T PLN02894 93 FINTVTFDS---KEDAPTLVMVHGYGASQGF-FFRNF------------------DALASRFRVIAIDQL-GWGGSSR-- 147 (402)
T ss_pred eEEEEEecC---CCCCCEEEEECCCCcchhH-HHHHH------------------HHHHhCCEEEEECCC-CCCCCCC--
Confidence 455554432 2467999999999887665 32110 112234789999988 7776632
Q ss_pred CCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 160 SSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 160 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
.. +...+.++..+.+.+.+..|.+.. ...+++|+|||+||..+..+|.+-.+ .++++++.++..
T Consensus 148 ~~-~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~---------~v~~lvl~~p~~ 211 (402)
T PLN02894 148 PD-FTCKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPE---------HVQHLILVGPAG 211 (402)
T ss_pred CC-cccccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCch---------hhcEEEEECCcc
Confidence 11 111122334445566666666543 23589999999999888777765433 388999988753
No 38
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.65 E-value=5.9e-07 Score=86.10 Aligned_cols=100 Identities=25% Similarity=0.285 Sum_probs=67.4
Q ss_pred CCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHH
Q 011426 95 KPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKD 174 (486)
Q Consensus 95 ~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~ 174 (486)
.|.||+++|.||++.. +-.+.+ .. +..+++.+|.| |-|.|.. ... .+.++.+++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~----------------~l---~~~~vi~~D~~-G~G~S~~--~~~---~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGE----------------AL---PDYPRLYIDLP-GHGGSAA--ISV---DGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHH----------------Hc---CCCCEEEecCC-CCCCCCC--ccc---cCHHHHHHH
Confidence 5889999999999877 432211 11 24799999988 6666642 221 144556666
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 175 SLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 175 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
+.++|.. +.-.+++++|+|+||..+-.+|.+..+. .++++++.++.
T Consensus 56 l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~--------~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG--------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc--------cccEEEEeCCC
Confidence 6666653 2346899999999998888888754221 17888887654
No 39
>PLN02965 Probable pheophorbidase
Probab=98.64 E-value=5.8e-07 Score=87.43 Aligned_cols=60 Identities=7% Similarity=0.010 Sum_probs=50.6
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~ 474 (486)
-.+++|+..|..|.++|....+...+.+. +-+++.+.+|||+++.++|++...++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP------------------------PAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC------------------------cceEEEecCCCCchhhcCHHHHHHHHH
Confidence 36999999999999999977766655542 345677899999999999999999999
Q ss_pred HHHc
Q 011426 475 SFLR 478 (486)
Q Consensus 475 ~fl~ 478 (486)
+|+.
T Consensus 248 ~~~~ 251 (255)
T PLN02965 248 QAVS 251 (255)
T ss_pred HHHH
Confidence 9985
No 40
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.55 E-value=1e-06 Score=89.74 Aligned_cols=62 Identities=18% Similarity=0.177 Sum_probs=51.6
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcC-ceeccccCChHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRG-AGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~g-AGHmvP~dqP~~a~~mi~ 474 (486)
..++||..|+.|.++|....+...+.+. .+-.+++|.+ |||+++.++|++...++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~ 333 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PRGSLRVLRSPYGHDAFLKETDRIDAILT 333 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CCCeEEEEeCCccHHHHhcCHHHHHHHHH
Confidence 5899999999999999887777776652 1235677874 999999999999999999
Q ss_pred HHHcCC
Q 011426 475 SFLRGD 480 (486)
Q Consensus 475 ~fl~~~ 480 (486)
+||...
T Consensus 334 ~FL~~~ 339 (343)
T PRK08775 334 TALRST 339 (343)
T ss_pred HHHHhc
Confidence 999653
No 41
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.50 E-value=4.8e-06 Score=84.57 Aligned_cols=152 Identities=14% Similarity=0.093 Sum_probs=87.0
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhc---c----cCCeEEcCCCCceecC---CCCc-ccccceEEE
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASE---E----IGPFRINKTASGLYLN---KLSW-NTEANLLFL 146 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~---E----~GP~~~~~~~~~l~~n---~~sw-~~~a~~l~i 146 (486)
|..|++...+.+ ..+.+|+.++|==+-+.. -.+. | -+|+.|+.+.. ...+ -..+ .+-.+|+-+
T Consensus 7 g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~--~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~~~ 80 (332)
T TIGR01607 7 GLLLKTYSWIVK---NAIGIIVLIHGLKSHLRL--QFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVYGL 80 (332)
T ss_pred CCeEEEeeeecc---CCeEEEEEECCCchhhhh--hhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEEEe
Confidence 567888776643 345799999985444431 1111 1 12344432210 0001 0122 345799999
Q ss_pred eCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhC----------------CCCC-CCceEEEccccccccHHHH
Q 011426 147 ETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRF----------------PRYK-GREVYLTGESYAGHYVPQL 209 (486)
Q Consensus 147 D~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~f----------------p~~~-~~~~yi~GESYgG~yvp~l 209 (486)
|.| |.|.|-+.........+-++.++|+..+++..-+.. .++. +.|++|+|||.||..+..+
T Consensus 81 D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 81 DLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 987 999886542211111255677788888887654310 0232 5799999999999988777
Q ss_pred HHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 210 AREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 210 a~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
+..+.+.... .....++|+++.+|.+.
T Consensus 160 ~~~~~~~~~~-~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 160 LELLGKSNEN-NDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHhcccccc-ccccccceEEEeccceE
Confidence 7655332100 01145899998888764
No 42
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.48 E-value=2.5e-06 Score=83.99 Aligned_cols=118 Identities=18% Similarity=0.186 Sum_probs=82.3
Q ss_pred ceeEeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccce
Q 011426 64 FQQFSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANL 143 (486)
Q Consensus 64 ~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~ 143 (486)
.....+|+.++ + +++++.|. .++..|++|.|+|=|=.+=.+ ......+. .....+
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wysw------------r~q~~~la------~~~~rv 74 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSW------------RHQIPGLA------SRGYRV 74 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhh------------hhhhhhhh------hcceEE
Confidence 45668888886 4 77777766 788999999999988776442 00000111 112589
Q ss_pred EEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 144 LFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 144 l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
+.+|.+ |-|+|-...... ..+.+..+.|+..+|.. +..++++++||+||+..+=.+|....+.
T Consensus 75 iA~Dlr-GyG~Sd~P~~~~--~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Per 137 (322)
T KOG4178|consen 75 IAPDLR-GYGFSDAPPHIS--EYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPER 137 (322)
T ss_pred EecCCC-CCCCCCCCCCcc--eeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhh
Confidence 999988 777775444421 23667778887777763 3356899999999999999999877776
No 43
>PRK07581 hypothetical protein; Validated
Probab=98.45 E-value=2.2e-05 Score=79.71 Aligned_cols=59 Identities=14% Similarity=0.180 Sum_probs=51.1
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcC-ceeccccCChHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRG-AGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~g-AGHmvP~dqP~~a~~mi~ 474 (486)
..+|||.+|+.|..+|....+.+.+.+. +.++++|.+ +||+++.++|+....+++
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~~ 330 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPADIAFID 330 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHHHHHHH
Confidence 5899999999999999988877766552 346778898 999999999999999999
Q ss_pred HHHc
Q 011426 475 SFLR 478 (486)
Q Consensus 475 ~fl~ 478 (486)
+||.
T Consensus 331 ~~~~ 334 (339)
T PRK07581 331 AALK 334 (339)
T ss_pred HHHH
Confidence 9985
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.42 E-value=7e-06 Score=99.19 Aligned_cols=108 Identities=15% Similarity=0.136 Sum_probs=71.5
Q ss_pred CCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCC----CCccCC
Q 011426 92 PLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSS----DLLDTG 167 (486)
Q Consensus 92 ~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~----~~~~~~ 167 (486)
.++.|.||++||.+|++.. +-.+.+ .+ .+..+++.+|.| |-|.|...... .....+
T Consensus 1368 ~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~s 1427 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEPTLS 1427 (1655)
T ss_pred CCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCccccccccccccCC
Confidence 4467899999999999987 332221 11 234689999988 77766432210 000124
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
.+..|+++.++++. +...+++|+|+|+||..+-.+|.+..+. ++++++.+|.
T Consensus 1428 i~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~~---------V~~lVlis~~ 1479 (1655)
T PLN02980 1428 VELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSDK---------IEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChHh---------hCEEEEECCC
Confidence 55667776666653 2245899999999999988888765443 7888887764
No 45
>PLN02511 hydrolase
Probab=98.42 E-value=1.6e-06 Score=89.89 Aligned_cols=137 Identities=16% Similarity=0.135 Sum_probs=80.2
Q ss_pred EeeeEEecCCCCceEEEEEEEe--cCCCCCCCceEeeCCCCChhhhch-hhhcccCCeEEcCCCCceecCCCCcccccce
Q 011426 67 FSGYVPVNKVPGRALFYWLTEA--THNPLNKPLVVWLNGGPGCSSVAY-GASEEIGPFRINKTASGLYLNKLSWNTEANL 143 (486)
Q Consensus 67 ~sGy~~v~~~~~~~lfy~f~es--~~~~~~~P~~lwlnGGPG~ss~~~-g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~ 143 (486)
..-+++..+ |..+.+..+.. ...+.++|+||.++|..|+|...+ -.+.+ ....+..++
T Consensus 72 ~re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------------~~~~~g~~v 132 (388)
T PLN02511 72 RRECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------------RARSKGWRV 132 (388)
T ss_pred eEEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------------HHHHCCCEE
Confidence 345666654 55566544432 123567899999999999874211 00000 001344689
Q ss_pred EEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCc
Q 011426 144 LFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHP 223 (486)
Q Consensus 144 l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~ 223 (486)
+-+|.| |-|-|-..... + .....++|+.++++..-.++| +.+++++|+|.||..+-..+.+-.+.
T Consensus 133 v~~d~r-G~G~s~~~~~~-~---~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~~~~~------- 197 (388)
T PLN02511 133 VVFNSR-GCADSPVTTPQ-F---YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGEEGEN------- 197 (388)
T ss_pred EEEecC-CCCCCCCCCcC-E---EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHhcCCC-------
Confidence 999988 66655322111 1 122346677777766666676 56899999999998866555432211
Q ss_pred ceeeEEEeeccccC
Q 011426 224 INLKGIMVGNAVTD 237 (486)
Q Consensus 224 inLkGi~IGng~~d 237 (486)
..|++.++.++-.+
T Consensus 198 ~~v~~~v~is~p~~ 211 (388)
T PLN02511 198 CPLSGAVSLCNPFD 211 (388)
T ss_pred CCceEEEEECCCcC
Confidence 34667665554333
No 46
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.37 E-value=5.1e-06 Score=84.00 Aligned_cols=60 Identities=27% Similarity=0.421 Sum_probs=53.0
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
+.+|||..|+.|.++|....+...+++ .|..+..|.+|||-+..++|++....|..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~------------------------pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~ 319 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL------------------------PNAELVEIPGAGHLPHLERPEEVAALLRS 319 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC------------------------CCceEEEeCCCCcccccCCHHHHHHHHHH
Confidence 478999999999999999666666554 37889999999999999999999999999
Q ss_pred HHcC
Q 011426 476 FLRG 479 (486)
Q Consensus 476 fl~~ 479 (486)
|+.+
T Consensus 320 Fi~~ 323 (326)
T KOG1454|consen 320 FIAR 323 (326)
T ss_pred HHHH
Confidence 9975
No 47
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.28 E-value=4.7e-05 Score=78.77 Aligned_cols=65 Identities=22% Similarity=0.269 Sum_probs=52.1
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEc-CceeccccCChHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVR-GAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~-gAGHmvP~dqP~~a~~mi~ 474 (486)
..++||..|+.|.++|....+...+.+.=.+ ...+++.|. ++||+.+.++|++..+.|.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~--------------------~~~~l~~i~~~~GH~~~le~p~~~~~~L~ 368 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAAG--------------------ADVSYAEIDSPYGHDAFLLDDPRYGRLVR 368 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhcC--------------------CCeEEEEeCCCCCchhHhcCHHHHHHHHH
Confidence 5899999999999999988877666653000 123677775 9999999999999999999
Q ss_pred HHHcCC
Q 011426 475 SFLRGD 480 (486)
Q Consensus 475 ~fl~~~ 480 (486)
+|+.+.
T Consensus 369 ~FL~~~ 374 (379)
T PRK00175 369 AFLERA 374 (379)
T ss_pred HHHHhh
Confidence 999753
No 48
>PLN02872 triacylglycerol lipase
Probab=98.22 E-value=1.8e-05 Score=82.11 Aligned_cols=61 Identities=21% Similarity=0.315 Sum_probs=49.7
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceec---cccCChHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHE---VPLFKPRAALQL 472 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHm---vP~dqP~~a~~m 472 (486)
.++|+|+.|..|.+++....+.+.+.|.= ...+..+.++||+ ...+.|+..++-
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~-----------------------~~~l~~l~~~gH~dfi~~~eape~V~~~ 381 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS-----------------------KPELLYLENYGHIDFLLSTSAKEDVYNH 381 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC-----------------------ccEEEEcCCCCCHHHHhCcchHHHHHHH
Confidence 58999999999999999999998888741 0134567899996 455889999999
Q ss_pred HHHHHcC
Q 011426 473 FKSFLRG 479 (486)
Q Consensus 473 i~~fl~~ 479 (486)
|-+|+.+
T Consensus 382 Il~fL~~ 388 (395)
T PLN02872 382 MIQFFRS 388 (395)
T ss_pred HHHHHHH
Confidence 9999974
No 49
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.20 E-value=2.5e-05 Score=78.01 Aligned_cols=136 Identities=20% Similarity=0.199 Sum_probs=90.0
Q ss_pred EeeeEEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEE
Q 011426 67 FSGYVPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFL 146 (486)
Q Consensus 67 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~i 146 (486)
..|+....+ +..++|+.++...++. .+|++++|.=.++.- |-.+.+ .+. ..-.+++=+
T Consensus 10 ~~~~~~~~d--~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~------~~G~~V~~~ 67 (298)
T COG2267 10 TEGYFTGAD--GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLA------ARGFDVYAL 67 (298)
T ss_pred ccceeecCC--CceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHH------hCCCEEEEe
Confidence 345555433 6789999887754433 899999999888765 422222 122 223478999
Q ss_pred eCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCccee
Q 011426 147 ETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINL 226 (486)
Q Consensus 147 D~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inL 226 (486)
|+| |-|.|.- ...... .+-++...|+..|++..-..+| ..|++|+|||.||-.+...+.... -.+
T Consensus 68 D~R-GhG~S~r-~~rg~~-~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~---------~~i 132 (298)
T COG2267 68 DLR-GHGRSPR-GQRGHV-DSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP---------PRI 132 (298)
T ss_pred cCC-CCCCCCC-CCcCCc-hhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC---------ccc
Confidence 999 8888762 122211 1334555666666665554444 679999999999987776665544 239
Q ss_pred eEEEeeccccCcc
Q 011426 227 KGIMVGNAVTDNY 239 (486)
Q Consensus 227 kGi~IGng~~d~~ 239 (486)
+|+++-+|++...
T Consensus 133 ~~~vLssP~~~l~ 145 (298)
T COG2267 133 DGLVLSSPALGLG 145 (298)
T ss_pred cEEEEECccccCC
Confidence 9999999988765
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=98.18 E-value=3.1e-05 Score=84.16 Aligned_cols=101 Identities=19% Similarity=0.179 Sum_probs=67.2
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
|..|.|+-+ .+.+.|.||.++|.++.+.. +..+.+ .+ .+..+++-+|.| |.|.|..
T Consensus 12 g~~l~~~~~----g~~~~~~ivllHG~~~~~~~-w~~~~~-----------~L-------~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEW----GDPDRPTVVLVHGYPDNHEV-WDGVAP-----------LL-------ADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEc----CCCCCCeEEEEcCCCchHHH-HHHHHH-----------Hh-------hcceEEEEecCC-CCCCCCC
Confidence 567877743 23457999999999988776 433222 12 234689999988 8888764
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHH
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLA 210 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 210 (486)
..... ..+.++.++|+..+++.. .+ .+|++|+|+|+||..+-.++
T Consensus 68 ~~~~~--~~~~~~~a~dl~~~i~~l---~~---~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 68 PKRTA--AYTLARLADDFAAVIDAV---SP---DRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred CCccc--ccCHHHHHHHHHHHHHHh---CC---CCcEEEEecChHHHHHHHHH
Confidence 32221 125677888888888753 11 35799999999995554333
No 51
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.12 E-value=2.7e-05 Score=85.69 Aligned_cols=117 Identities=22% Similarity=0.337 Sum_probs=73.5
Q ss_pred CCceEEEEEEEecC-CC-CCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCC
Q 011426 77 PGRALFYWLTEATH-NP-LNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGF 154 (486)
Q Consensus 77 ~~~~lfy~f~es~~-~~-~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGf 154 (486)
.|..+..|++.-.. ++ ++-|+||+++||| +++ +|. .++..- ..=+.+-+.||+++..--+||
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~~~~~~------q~~~~~G~~V~~~n~RGS~Gy 437 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------SFNPEI------QVLASAGYAVLAPNYRGSTGY 437 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------ccchhh------HHHhcCCeEEEEeCCCCCCcc
Confidence 36789999887643 33 2359999999999 445 331 111110 112355678999995534455
Q ss_pred CcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHH
Q 011426 155 SYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAR 211 (486)
Q Consensus 155 Sy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 211 (486)
+..=........+ ....+|+.+++. |+.+.|.-...++.|+|.||||...-.++.
T Consensus 438 G~~F~~~~~~~~g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~ 492 (620)
T COG1506 438 GREFADAIRGDWG-GVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT 492 (620)
T ss_pred HHHHHHhhhhccC-CccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh
Confidence 4321110000111 235788888898 899999887788999999999976555553
No 52
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.12 E-value=9.4e-06 Score=82.28 Aligned_cols=133 Identities=18% Similarity=0.265 Sum_probs=84.2
Q ss_pred eEEEEEEEe--cCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 80 ALFYWLTEA--THNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 80 ~lfy~f~es--~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
.-.||++++ +.+|++||+||+++|| |.+.+.=|+.+. ...+=+...+...+|.+|-..-. | .
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~-~ 168 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--S-D 168 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--c-c
Confidence 346899986 3468889999999999 555555555432 11122222234489999944221 0 0
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
..+..|+ . +..++.+..+...+... .+++.|.|+|-||+.+-.+.+++.+.++. +-=|++++.+||++
T Consensus 169 ~~~~~yP--t---QL~qlv~~Y~~Lv~~~G---~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 169 EHGHKYP--T---QLRQLVATYDYLVESEG---NKNIILMGDSAGGNLALSFLQYLKKPNKL----PYPKSAILISPWVN 236 (374)
T ss_pred cCCCcCc--h---HHHHHHHHHHHHHhccC---CCeEEEEecCccHHHHHHHHHHHhhcCCC----CCCceeEEECCCcC
Confidence 0222232 2 33444444444443332 46899999999999999999998775432 33489999999999
Q ss_pred ccc
Q 011426 238 NYY 240 (486)
Q Consensus 238 ~~~ 240 (486)
+..
T Consensus 237 l~~ 239 (374)
T PF10340_consen 237 LVP 239 (374)
T ss_pred CcC
Confidence 873
No 53
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.08 E-value=9e-06 Score=76.51 Aligned_cols=56 Identities=16% Similarity=0.214 Sum_probs=47.6
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~ 474 (486)
-..++|+.+|..|.++|....+...+.+. +..++++.++||....+.|+..-++|.
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLIP------------------------NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHST------------------------TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC------------------------CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 56999999999999999998888555542 457789999999999999999888775
No 54
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.04 E-value=0.00028 Score=72.07 Aligned_cols=63 Identities=22% Similarity=0.281 Sum_probs=50.0
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEc-CceeccccCChHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVR-GAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~-gAGHmvP~dqP~~a~~mi~ 474 (486)
..++|+..|+.|.++|....+...+.+. .. + -..+|+.|. ++||+++.++|++..+.|.
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--~~----------~--------~~v~~~~i~~~~GH~~~le~p~~~~~~l~ 347 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP--AA----------G--------LRVTYVEIESPYGHDAFLVETDQVEELIR 347 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh--hc----------C--------CceEEEEeCCCCCcchhhcCHHHHHHHHH
Confidence 5899999999999999998888777663 00 0 013455564 8999999999999999999
Q ss_pred HHHc
Q 011426 475 SFLR 478 (486)
Q Consensus 475 ~fl~ 478 (486)
+|++
T Consensus 348 ~FL~ 351 (351)
T TIGR01392 348 GFLR 351 (351)
T ss_pred HHhC
Confidence 9984
No 55
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.82 E-value=5.6e-05 Score=74.57 Aligned_cols=117 Identities=18% Similarity=0.146 Sum_probs=74.6
Q ss_pred CCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCc
Q 011426 77 PGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSY 156 (486)
Q Consensus 77 ~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy 156 (486)
+|.+..|. + +..++|.||+++|..+.++. +..+.+ .|.. ...+++-+|.| |.|.|.
T Consensus 5 ~~~~~~~~----~-~~~~~p~vvliHG~~~~~~~-w~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~ 60 (273)
T PLN02211 5 NGEEVTDM----K-PNRQPPHFVLIHGISGGSWC-WYKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQ 60 (273)
T ss_pred cccccccc----c-ccCCCCeEEEECCCCCCcCc-HHHHHH-----------HHHh------CCCEEEEeccc-CCCCCC
Confidence 35566655 2 23668999999998887776 332221 1211 23589999998 777664
Q ss_pred ccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 157 TNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
...... .+.++.++++.++|+. ... .++++|+|+||||..+..++.+..+. ++++++.++.
T Consensus 61 ~~~~~~---~~~~~~~~~l~~~i~~----l~~--~~~v~lvGhS~GG~v~~~~a~~~p~~---------v~~lv~~~~~ 121 (273)
T PLN02211 61 SDADSV---TTFDEYNKPLIDFLSS----LPE--NEKVILVGHSAGGLSVTQAIHRFPKK---------ICLAVYVAAT 121 (273)
T ss_pred CCcccC---CCHHHHHHHHHHHHHh----cCC--CCCEEEEEECchHHHHHHHHHhChhh---------eeEEEEeccc
Confidence 332221 2555666666666553 221 36899999999999888777654332 7888887664
No 56
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.68 E-value=0.00087 Score=66.08 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=53.1
Q ss_pred cceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCC
Q 011426 141 ANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKS 220 (486)
Q Consensus 141 a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 220 (486)
.+++-+|.| |.|-|.... .+.++..+|+..+++.+-+..|.+ .++.++|+|.||..+-.+|.. .
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----~--- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN------LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA----D--- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----C---
Confidence 689999988 888764321 133455677777777655555544 369999999999765555421 1
Q ss_pred CCcceeeEEEeeccccC
Q 011426 221 KHPINLKGIMVGNAVTD 237 (486)
Q Consensus 221 ~~~inLkGi~IGng~~d 237 (486)
-.++|+++.||++.
T Consensus 122 ---~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVR 135 (274)
T ss_pred ---CCccEEEEECCccC
Confidence 13999999998754
No 57
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.64 E-value=0.00034 Score=68.69 Aligned_cols=126 Identities=12% Similarity=0.032 Sum_probs=76.7
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCCh---hh-hchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCC
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGC---SS-VAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVG 153 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~---ss-~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtG 153 (486)
...+|.|+++... ...+|+||+++|-.+- +. + +..+.+ .+. ..-.+++-+|.| |.|
T Consensus 9 ~g~~~~~~~~p~~-~~~~~~VlllHG~g~~~~~~~~~-~~~la~-----------~La------~~Gy~Vl~~Dl~-G~G 68 (266)
T TIGR03101 9 HGFRFCLYHPPVA-VGPRGVVIYLPPFAEEMNKSRRM-VALQAR-----------AFA------AGGFGVLQIDLY-GCG 68 (266)
T ss_pred CCcEEEEEecCCC-CCCceEEEEECCCcccccchhHH-HHHHHH-----------HHH------HCCCEEEEECCC-CCC
Confidence 4568888886642 2347999999985431 11 1 100000 011 124689999988 788
Q ss_pred CCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeec
Q 011426 154 FSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGN 233 (486)
Q Consensus 154 fSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGn 233 (486)
.|-..... .+.+..++|+..+++ |++... ..+++|+|+|+||..+..+|.+..+ .++++++.+
T Consensus 69 ~S~g~~~~----~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~---------~v~~lVL~~ 131 (266)
T TIGR03101 69 DSAGDFAA----ARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLAA---------KCNRLVLWQ 131 (266)
T ss_pred CCCCcccc----CCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCcc---------ccceEEEec
Confidence 77533221 133344555555433 444332 3589999999999998888755432 278999999
Q ss_pred cccCccc
Q 011426 234 AVTDNYY 240 (486)
Q Consensus 234 g~~d~~~ 240 (486)
|+++...
T Consensus 132 P~~~g~~ 138 (266)
T TIGR03101 132 PVVSGKQ 138 (266)
T ss_pred cccchHH
Confidence 9877653
No 58
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.52 E-value=0.00026 Score=74.14 Aligned_cols=122 Identities=20% Similarity=0.189 Sum_probs=73.2
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhh--hchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCC
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSS--VAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFS 155 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss--~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfS 155 (486)
+..|.-+++... ..+..|+|| +.||.++.. . +..+.+ .+. ..-.++|-+|.| |.|.|
T Consensus 178 g~~l~g~l~~P~-~~~~~P~Vl-i~gG~~~~~~~~-~~~~~~-----------~La------~~Gy~vl~~D~p-G~G~s 236 (414)
T PRK05077 178 GGPITGFLHLPK-GDGPFPTVL-VCGGLDSLQTDY-YRLFRD-----------YLA------PRGIAMLTIDMP-SVGFS 236 (414)
T ss_pred CcEEEEEEEECC-CCCCccEEE-EeCCcccchhhh-HHHHHH-----------HHH------hCCCEEEEECCC-CCCCC
Confidence 435665555433 334578877 567777532 2 211111 011 223689999999 88887
Q ss_pred cccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 156 YTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 156 y~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
...... .+ .......+..|+...|.....++.|+|+|+||.+++.+|..-.+ .++++++.+|.
T Consensus 237 ~~~~~~-----~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~---------ri~a~V~~~~~ 299 (414)
T PRK05077 237 SKWKLT-----QD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP---------RLKAVACLGPV 299 (414)
T ss_pred CCCCcc-----cc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc---------CceEEEEECCc
Confidence 432110 11 22222345556666666666789999999999999988854322 28899988887
Q ss_pred cC
Q 011426 236 TD 237 (486)
Q Consensus 236 ~d 237 (486)
++
T Consensus 300 ~~ 301 (414)
T PRK05077 300 VH 301 (414)
T ss_pred cc
Confidence 54
No 59
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.50 E-value=0.00034 Score=66.18 Aligned_cols=115 Identities=17% Similarity=0.071 Sum_probs=61.4
Q ss_pred CCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc-----cCCCCCccC
Q 011426 92 PLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT-----NRSSDLLDT 166 (486)
Q Consensus 92 ~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~-----~~~~~~~~~ 166 (486)
.+..|+||+|+|+++.++. +..-. + +. .+.. ..-+.+|..|.| |.|.+.. ..... .
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~--~---~~----~~a~-----~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~---~ 70 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDW--G---WK----AAAD-----RYGFVLVAPEQT-SYNSSNNCWDWFFTHHR---A 70 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-Hhhhc--C---hH----HHHH-----hCCeEEEecCCc-CccccCCCCCCCCcccc---C
Confidence 4568999999999987664 21000 0 00 0000 123477777876 3332211 00000 0
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
.......++..++....++++ ....+++|+|+|.||..+-.++.+-.+. +.++++.+|.
T Consensus 71 ~~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~~---------~~~~~~~~g~ 129 (212)
T TIGR01840 71 RGTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPDV---------FAGGASNAGL 129 (212)
T ss_pred CCCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCchh---------heEEEeecCC
Confidence 011223444444444444442 3345799999999999877776543222 7787777765
No 60
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.43 E-value=0.0056 Score=63.51 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=53.3
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcC-ceeccccCChHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRG-AGHEVPLFKPRAALQLF 473 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~g-AGHmvP~dqP~~a~~mi 473 (486)
-..+|||..|+.|.++|..-.+...+.+.=.+ .+.++..|.+ +||+.+.++|+.....|
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~--------------------~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQKQG--------------------KYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC--------------------CCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 36899999999999999887777666653100 1467888985 99999999999999999
Q ss_pred HHHHcCC
Q 011426 474 KSFLRGD 480 (486)
Q Consensus 474 ~~fl~~~ 480 (486)
.+|+..+
T Consensus 382 ~~FL~~~ 388 (389)
T PRK06765 382 YEFLNRK 388 (389)
T ss_pred HHHHccc
Confidence 9999753
No 61
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.31 E-value=0.0017 Score=63.97 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=31.3
Q ss_pred CCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 189 YKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 189 ~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
....+++|+|+|+||..+-.++.+-.+. +++++..+|+.++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~~---------~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPDR---------FKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCccc---------ceEEEEECCccCc
Confidence 3346799999999998877777653332 7899999988765
No 62
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.11 E-value=0.00047 Score=68.09 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=69.4
Q ss_pred CCCCCceEeeCCCCChh-hhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHH
Q 011426 92 PLNKPLVVWLNGGPGCS-SVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGR 170 (486)
Q Consensus 92 ~~~~P~~lwlnGGPG~s-s~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~ 170 (486)
..++|++|+++|-.|.. ....- .+ .+.+.-....|++.+|-+.+..-.|.. . ..+...
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~---------------~l-~~~ll~~~~~nVi~vD~~~~~~~~y~~--a---~~~~~~ 91 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWIS---------------DL-RKAYLSRGDYNVIVVDWGRGANPNYPQ--A---VNNTRV 91 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHH---------------HH-HHHHHhcCCCEEEEEECccccccChHH--H---HHhHHH
Confidence 34679999999988765 22100 00 011111135799999988331111110 0 113445
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
+++++..+|+...+.. .....+++|+|+|+||+.+-.+|.++.++ ++.|+..+|.
T Consensus 92 v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~~---------v~~iv~LDPa 146 (275)
T cd00707 92 VGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNGK---------LGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcCc---------cceeEEecCC
Confidence 6777777777665542 22345899999999999999888776432 8888888775
No 63
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.86 E-value=0.0037 Score=58.33 Aligned_cols=104 Identities=23% Similarity=0.188 Sum_probs=66.3
Q ss_pred CCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHH
Q 011426 95 KPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKD 174 (486)
Q Consensus 95 ~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~ 174 (486)
.|.+++++|+|+++... ....+. +..... + .+++.+|+| |.|.|. .. .+ .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~~-~~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSVW-RPVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhhh-HHHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 67999999999998873 221010 111111 1 799999999 999886 11 11 22222444
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 175 SLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 175 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
+..+++ .. ...+++++|+|+||..+-.++.+..+. ++++++.++...
T Consensus 78 ~~~~~~----~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~~---------~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALLD----AL---GLEKVVLVGHSMGGAVALALALRHPDR---------VRGLVLIGPAPP 124 (282)
T ss_pred HHHHHH----Hh---CCCceEEEEecccHHHHHHHHHhcchh---------hheeeEecCCCC
Confidence 444444 22 233499999999988877777766553 788888887655
No 64
>PLN02442 S-formylglutathione hydrolase
Probab=96.84 E-value=0.0069 Score=60.04 Aligned_cols=57 Identities=14% Similarity=0.123 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
..+++...+..++.. ....+++|+|+|+||+-+-.+|.+-.+. +++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~~---------~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPDK---------YKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCchh---------EEEEEEECCccCcc
Confidence 345555566665543 3345799999999998777766543322 78999999987753
No 65
>PRK10985 putative hydrolase; Provisional
Probab=96.82 E-value=0.0046 Score=62.49 Aligned_cols=46 Identities=7% Similarity=-0.023 Sum_probs=35.1
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCC
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFK 465 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dq 465 (486)
.+++|+.+|+.|.+++....+...+. ..+++++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPESL------------------------PPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHHHh------------------------CCCeEEEECCCCCceeeCCC
Confidence 58999999999999987655543221 12567888999999998764
No 66
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.71 E-value=0.0077 Score=58.24 Aligned_cols=108 Identities=22% Similarity=0.332 Sum_probs=74.8
Q ss_pred CCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHH
Q 011426 93 LNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTA 172 (486)
Q Consensus 93 ~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a 172 (486)
..-|+++.++|| |.|.+.+..|.- .+..+ -..-++-+|- -|.|=+...+..++ +.+..+
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~-----~~~r~~a~Dl-RgHGeTk~~~e~dl---S~eT~~ 130 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS-----------ELKSK-----IRCRCLALDL-RGHGETKVENEDDL---SLETMS 130 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH-----------HHHhh-----cceeEEEeec-cccCccccCChhhc---CHHHHH
Confidence 456999999988 888876555422 11111 0112477994 59998887777764 778899
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeec
Q 011426 173 KDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGN 233 (486)
Q Consensus 173 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGn 233 (486)
+|+...++.+|..-| .+++|+|||.||-.+.+.|..=. .-+|.|+.+.+
T Consensus 131 KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~--------lpsl~Gl~viD 179 (343)
T KOG2564|consen 131 KDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKT--------LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhh--------chhhhceEEEE
Confidence 999999999886443 36999999999987755553111 13588888876
No 67
>PRK10566 esterase; Provisional
Probab=96.69 E-value=0.0086 Score=57.58 Aligned_cols=62 Identities=24% Similarity=0.287 Sum_probs=47.3
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
..++|+.+|..|.++|...++.+.+.++=.+. ..++++.++.|+||.+. | ..++-+.+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------------------~~~~~~~~~~~~~H~~~---~-~~~~~~~~ 243 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL------------------DKNLTCLWEPGVRHRIT---P-EALDAGVA 243 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------------------CcceEEEecCCCCCccC---H-HHHHHHHH
Confidence 36899999999999999999988887742221 11478889999999974 3 45677777
Q ss_pred HHcC
Q 011426 476 FLRG 479 (486)
Q Consensus 476 fl~~ 479 (486)
||..
T Consensus 244 fl~~ 247 (249)
T PRK10566 244 FFRQ 247 (249)
T ss_pred HHHh
Confidence 7754
No 68
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.56 E-value=0.016 Score=56.68 Aligned_cols=125 Identities=21% Similarity=0.264 Sum_probs=75.7
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccc-----eEEEeC----
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEAN-----LLFLET---- 148 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~-----~l~iD~---- 148 (486)
+.+.-||+|.-..-++..||||.|+|+=|...- + .+-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~-------------------~~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-Q-------------------LHGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-h-------------------hcccchhhhhcccCcEEECcCccccc
Confidence 567889998776667888999999999887654 2 12223443332 344331
Q ss_pred --CCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCccee
Q 011426 149 --PAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINL 226 (486)
Q Consensus 149 --PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inL 226 (486)
|-+.|=++...+.- ...+.+..+.+.+.....+|- -....+||+|=|-||..+-.++..-.+- +
T Consensus 104 wn~~~~~~~~~p~~~~----~g~ddVgflr~lva~l~~~~g-idp~RVyvtGlS~GG~Ma~~lac~~p~~---------f 169 (312)
T COG3509 104 WNANGCGNWFGPADRR----RGVDDVGFLRALVAKLVNEYG-IDPARVYVTGLSNGGRMANRLACEYPDI---------F 169 (312)
T ss_pred cCCCcccccCCccccc----CCccHHHHHHHHHHHHHHhcC-cCcceEEEEeeCcHHHHHHHHHhcCccc---------c
Confidence 23444343222110 122334444444444445442 3345799999999999888887654433 8
Q ss_pred eEEEeecccc
Q 011426 227 KGIMVGNAVT 236 (486)
Q Consensus 227 kGi~IGng~~ 236 (486)
.++++..|..
T Consensus 170 aa~A~VAg~~ 179 (312)
T COG3509 170 AAIAPVAGLL 179 (312)
T ss_pred cceeeeeccc
Confidence 8888888876
No 69
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.51 E-value=0.0067 Score=63.51 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=53.5
Q ss_pred ccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcC
Q 011426 140 EANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSK 219 (486)
Q Consensus 140 ~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~ 219 (486)
..|+|-+|.| |++.+..... ..+...+|+++.++|+...+.. .+.-.+++|+|+|.||+.+-.+|.+...
T Consensus 73 d~nVI~VDw~---g~g~s~y~~a--~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~---- 142 (442)
T TIGR03230 73 SANVIVVDWL---SRAQQHYPTS--AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKH---- 142 (442)
T ss_pred CCEEEEEECC---CcCCCCCccc--cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCc----
Confidence 4799999998 3332221111 1234567888888877554433 2445689999999999988887764322
Q ss_pred CCCcceeeEEEeeccc
Q 011426 220 SKHPINLKGIMVGNAV 235 (486)
Q Consensus 220 ~~~~inLkGi~IGng~ 235 (486)
.|..|++.+|.
T Consensus 143 -----rV~rItgLDPA 153 (442)
T TIGR03230 143 -----KVNRITGLDPA 153 (442)
T ss_pred -----ceeEEEEEcCC
Confidence 27888888874
No 70
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.50 E-value=0.006 Score=66.34 Aligned_cols=129 Identities=19% Similarity=0.164 Sum_probs=77.9
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCc-ccccceEEEeCCCCCCCCc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSW-NTEANLLFLETPAGVGFSY 156 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw-~~~a~~l~iD~PvGtGfSy 156 (486)
|.+|+...+.-. +....|+||.++|--..+....+. + . ....-| .+-..++-+|.+ |.|.|-
T Consensus 6 G~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~~~~--~------------~-~~~~~l~~~Gy~vv~~D~R-G~g~S~ 68 (550)
T TIGR00976 6 GTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLRWGL--D------------K-TEPAWFVAQGYAVVIQDTR-GRGASE 68 (550)
T ss_pred CCEEEEEEEecC-CCCCCCEEEEecCCCCchhhcccc--c------------c-ccHHHHHhCCcEEEEEecc-ccccCC
Confidence 667887766432 344689999998654432210000 0 0 000112 235689999976 888886
Q ss_pred ccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 157 TNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
+.... .+ ...++|+.++|+ |+.+.|. .+.++.++|+||||..+-.+|.. .+ -.|++++..++..
T Consensus 69 g~~~~----~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---~~------~~l~aiv~~~~~~ 132 (550)
T TIGR00976 69 GEFDL----LG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---QP------PALRAIAPQEGVW 132 (550)
T ss_pred CceEe----cC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---CC------CceeEEeecCccc
Confidence 43221 12 345666666655 6666653 34689999999999776665542 11 2399999988887
Q ss_pred Ccc
Q 011426 237 DNY 239 (486)
Q Consensus 237 d~~ 239 (486)
|..
T Consensus 133 d~~ 135 (550)
T TIGR00976 133 DLY 135 (550)
T ss_pred chh
Confidence 644
No 71
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.38 E-value=0.026 Score=57.12 Aligned_cols=144 Identities=18% Similarity=0.201 Sum_probs=90.9
Q ss_pred eeeEEecCCCCceEEEEEEEecCC-C-CCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCc-ccccceE
Q 011426 68 SGYVPVNKVPGRALFYWLTEATHN-P-LNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSW-NTEANLL 144 (486)
Q Consensus 68 sGy~~v~~~~~~~lfy~f~es~~~-~-~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw-~~~a~~l 144 (486)
+.=+.++ ....++-+.|..... + ..+|+|||++||=-|-+... . ....+--++ -..++.+
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~--------~-------~~y~~~~~~~a~~~~~v 125 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSAN--------S-------PAYDSFCTRLAAELNCV 125 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCC--------C-------chhHHHHHHHHHHcCeE
Confidence 3444444 356788888877643 3 68999999999977755310 0 011111122 2455666
Q ss_pred EEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHH-HHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCc
Q 011426 145 FLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIR-WIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHP 223 (486)
Q Consensus 145 ~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~ 223 (486)
-|= |+|-.+... .++ ..-++.-+.+..++++ |.+..-..+ .++|+|.|-||..+-.+|.++.+.. ..+
T Consensus 126 vvS----VdYRLAPEh-~~P-a~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~---~~~ 194 (336)
T KOG1515|consen 126 VVS----VDYRLAPEH-PFP-AAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK---LSK 194 (336)
T ss_pred EEe----cCcccCCCC-CCC-ccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc---CCC
Confidence 543 366554332 232 2334444445555555 777665553 4999999999999999999999863 123
Q ss_pred ceeeEEEeeccccCcc
Q 011426 224 INLKGIMVGNAVTDNY 239 (486)
Q Consensus 224 inLkGi~IGng~~d~~ 239 (486)
+.|+|.++.-|++...
T Consensus 195 ~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 195 PKIKGQILIYPFFQGT 210 (336)
T ss_pred cceEEEEEEecccCCC
Confidence 7899999999887654
No 72
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.37 E-value=0.11 Score=53.15 Aligned_cols=62 Identities=15% Similarity=0.123 Sum_probs=46.6
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCCh---HHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKP---RAALQ 471 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP---~~a~~ 471 (486)
-..+||+.+|..|.++|....+.+.+.+.= ...++..+ .+||+.+.+.| +....
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~----------------------~~~~~~~~-~~gH~~~~~~~~~~~~v~~ 341 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVSS----------------------EDYTELSF-PGGHIGIYVSGKAQKEVPP 341 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcCC----------------------CCeEEEEc-CCCCEEEEECchhHhhhhH
Confidence 358999999999999999998888777631 12344444 58999998876 55667
Q ss_pred HHHHHHcC
Q 011426 472 LFKSFLRG 479 (486)
Q Consensus 472 mi~~fl~~ 479 (486)
-+.+|+..
T Consensus 342 ~i~~wl~~ 349 (350)
T TIGR01836 342 AIGKWLQA 349 (350)
T ss_pred HHHHHHHh
Confidence 77788754
No 73
>PLN00021 chlorophyllase
Probab=96.35 E-value=0.0095 Score=59.97 Aligned_cols=116 Identities=16% Similarity=0.143 Sum_probs=69.4
Q ss_pred CCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHH
Q 011426 92 PLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRT 171 (486)
Q Consensus 92 ~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~ 171 (486)
..+.|+|+|++|+.+.... +..+.+ .+. +| -..++.+|.+ |++... . ..+.+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~La----s~--G~~VvapD~~---g~~~~~---~---~~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HIA----SH--GFIVVAPQLY---TLAGPD---G---TDEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HHH----hC--CCEEEEecCC---CcCCCC---c---hhhHHH
Confidence 4578999999999877654 322221 111 11 2467777866 343211 1 122334
Q ss_pred HHHHHHHHHHHHHh-C---CCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 172 AKDSLQFLIRWIDR-F---PRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 172 a~~~~~fL~~f~~~-f---p~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
+.++..++.+-++. - .+....+++|+|||+||..+-.+|.+..+... ...+++++..+|+...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~----~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSL----PLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccccc----ccceeeEEeecccccc
Confidence 56666666654332 1 12333579999999999998888876543311 1458999988887543
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.02 E-value=0.014 Score=55.40 Aligned_cols=102 Identities=16% Similarity=0.164 Sum_probs=68.9
Q ss_pred ceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHH
Q 011426 97 LVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSL 176 (486)
Q Consensus 97 ~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~ 176 (486)
.|+++.+|=|+++. |--|... +. +. ..++..|+.| |...... . ..+-++.|+...
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~~-----------l~-~~-----~~~v~~i~~~---~~~~~~~-~---~~si~~la~~y~ 56 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLARA-----------LP-DD-----VIGVYGIEYP---GRGDDEP-P---PDSIEELASRYA 56 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHHH-----------HT-TT-----EEEEEEECST---TSCTTSH-E---ESSHHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHHh-----------CC-CC-----eEEEEEEecC---CCCCCCC-C---CCCHHHHHHHHH
Confidence 57888888886665 4222110 11 10 3578999988 5441111 1 236777888777
Q ss_pred HHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 177 QFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 177 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
+.|+ ...| ..|++|+|+|+||..+=.+|.+|.+++ ..+..+++.++.
T Consensus 57 ~~I~---~~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G------~~v~~l~liD~~ 103 (229)
T PF00975_consen 57 EAIR---ARQP---EGPYVLAGWSFGGILAFEMARQLEEAG------EEVSRLILIDSP 103 (229)
T ss_dssp HHHH---HHTS---SSSEEEEEETHHHHHHHHHHHHHHHTT-------SESEEEEESCS
T ss_pred HHhh---hhCC---CCCeeehccCccHHHHHHHHHHHHHhh------hccCceEEecCC
Confidence 7775 3555 349999999999999999999998875 448899998864
No 75
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.01 E-value=0.054 Score=53.23 Aligned_cols=128 Identities=19% Similarity=0.112 Sum_probs=83.4
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
|.+||.-...-..+++.+-+|+.++|.=+-||..| .+.- - .+..+ -.-+--+|+. |.|.|-+
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~---~~~a-~-------~l~~~------g~~v~a~D~~-GhG~SdG 98 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRY---QSTA-K-------RLAKS------GFAVYAIDYE-GHGRSDG 98 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhhH---HHHH-H-------HHHhC------CCeEEEeecc-CCCcCCC
Confidence 67888876665555577789999998766664312 1100 0 11111 1246779988 8887753
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
...|. .+-+...+|...|+..+- ...+++..|.|++|||.||-.+-.++.+ +. --..|+++..|..
T Consensus 99 --l~~yi-~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~p-------~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 99 --LHAYV-PSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK--DP-------NFWDGAILVAPMC 164 (313)
T ss_pred --CcccC-CcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh--CC-------cccccceeeeccc
Confidence 33443 477778888887777644 4557778999999999999877766654 21 2267877777654
No 76
>PRK10115 protease 2; Provisional
Probab=95.99 E-value=0.023 Score=63.36 Aligned_cols=137 Identities=16% Similarity=0.042 Sum_probs=77.4
Q ss_pred CCCceEEEEEEEecC--CCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCccccc-ceEEEeCCCCC
Q 011426 76 VPGRALFYWLTEATH--NPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEA-NLLFLETPAGV 152 (486)
Q Consensus 76 ~~~~~lfy~f~es~~--~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a-~~l~iD~PvGt 152 (486)
..|..+-.|++-... .....|+||+.+||||.+... ++..+. .+|...- -+++..--=|+
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~~----------------~~l~~rG~~v~~~n~RGs~ 486 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFSR----------------LSLLDRGFVYAIVHVRGGG 486 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHHH----------------HHHHHCCcEEEEEEcCCCC
Confidence 346777776554332 234569999999999999653 332221 1233332 33444433344
Q ss_pred CCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEee
Q 011426 153 GFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVG 232 (486)
Q Consensus 153 GfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IG 232 (486)
||...=...+.. ..-...-+|+..+.+...++ .--....+.|.|-||||..+-.++.+-.+. +++++.+
T Consensus 487 g~G~~w~~~g~~-~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl---------f~A~v~~ 555 (686)
T PRK10115 487 ELGQQWYEDGKF-LKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPEL---------FHGVIAQ 555 (686)
T ss_pred ccCHHHHHhhhh-hcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhh---------eeEEEec
Confidence 454321111000 01113456666666544433 323346799999999998666555433332 9999999
Q ss_pred ccccCccc
Q 011426 233 NAVTDNYY 240 (486)
Q Consensus 233 ng~~d~~~ 240 (486)
.|++|...
T Consensus 556 vp~~D~~~ 563 (686)
T PRK10115 556 VPFVDVVT 563 (686)
T ss_pred CCchhHhh
Confidence 99988753
No 77
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.73 E-value=0.039 Score=45.94 Aligned_cols=65 Identities=29% Similarity=0.385 Sum_probs=54.3
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
..+||+.+|..|.++|+.+.+...+.|. +-..+++.++||-+....-.-+.+++.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~~ 89 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVDD 89 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC------------------------CceEEEEeccCcceecCCChHHHHHHHH
Confidence 3899999999999999999999988874 2357899999999986444466789999
Q ss_pred HHcCCCCCC
Q 011426 476 FLRGDPLPK 484 (486)
Q Consensus 476 fl~~~~l~~ 484 (486)
|+..-.+|.
T Consensus 90 yl~~G~lP~ 98 (103)
T PF08386_consen 90 YLLDGTLPA 98 (103)
T ss_pred HHHcCCCCC
Confidence 998777774
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.57 E-value=0.063 Score=52.74 Aligned_cols=119 Identities=17% Similarity=0.243 Sum_probs=81.3
Q ss_pred CCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCC----CCccCCcHH
Q 011426 95 KPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSS----DLLDTGDGR 170 (486)
Q Consensus 95 ~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~----~~~~~~~~~ 170 (486)
+++++|+-|=||.-.. |--|.+ .|..+- +....++=+... |++...... +....+.++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHH
Confidence 5899999999999987 544433 233331 566778888866 777655441 112347888
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
+.+.-.+||+++....+ ..+.+++|.|||-|+..+-.+..++.+ ...+++++++.=|.+..
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~~------~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLPD------LKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccc------cCCceeEEEEeCCcccc
Confidence 99999999999988653 136789999999997666666555541 11567777776665543
No 79
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.53 E-value=0.56 Score=50.04 Aligned_cols=87 Identities=20% Similarity=0.248 Sum_probs=63.2
Q ss_pred hHHHHHHHhhCCCeEEEEecCCCCCCCchhHHHHHHhcccC-CCccccceeEcCeeeEEEEEeCCeEEEEEcCceecc--
Q 011426 385 VLPIYRKMIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLT-TKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEV-- 461 (486)
Q Consensus 385 ~~~~l~~LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~-~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmv-- 461 (486)
.-+.|....++|=|+|+|||..|.+++..+|..+-+++.=. +.+ ..++..| +-|..|.|.||--
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~-------~~~v~dF------~RlF~vPGm~HC~gG 408 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA-------LADVDDF------YRLFMVPGMGHCGGG 408 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc-------cccccce------eEEEecCCCcccCCC
Confidence 34567777789999999999999999999999998877311 100 0012222 3467899999985
Q ss_pred ccCChHHHHHHHHHHHcCCCCCC
Q 011426 462 PLFKPRAALQLFKSFLRGDPLPK 484 (486)
Q Consensus 462 P~dqP~~a~~mi~~fl~~~~l~~ 484 (486)
|-..|-.++.-|.+|+.+-.-|+
T Consensus 409 ~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 409 PGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CCCCCCCHHHHHHHHHhCCCCCC
Confidence 44466688999999999866664
No 80
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=95.50 E-value=0.68 Score=49.99 Aligned_cols=85 Identities=9% Similarity=0.012 Sum_probs=52.1
Q ss_pred cceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCC
Q 011426 141 ANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKS 220 (486)
Q Consensus 141 a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 220 (486)
..++-||-+ |-|.|....+ -++-+.+.+.++|..+.+... ..+++++|+|.||..+...+..+.....
T Consensus 221 f~V~~iDwr-gpg~s~~~~~------~ddY~~~~i~~al~~v~~~~g---~~kv~lvG~cmGGtl~a~ala~~aa~~~-- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADKT------FDDYIRDGVIAALEVVEAITG---EKQVNCVGYCIGGTLLSTALAYLAARGD-- 288 (532)
T ss_pred cEEEEEECC-CCCcccccCC------hhhhHHHHHHHHHHHHHHhcC---CCCeEEEEECcCcHHHHHHHHHHHHhCC--
Confidence 578889976 6665532211 122333456666666555443 5689999999999987664333332210
Q ss_pred CCcceeeEEEeeccccCcc
Q 011426 221 KHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 221 ~~~inLkGi~IGng~~d~~ 239 (486)
+-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 12388888888877765
No 81
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=95.45 E-value=0.041 Score=52.37 Aligned_cols=39 Identities=26% Similarity=0.232 Sum_probs=31.8
Q ss_pred CCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 188 RYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 188 ~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
....+.+|++|.|-||.....++....+. +.++++.+|.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~---------faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDL---------FAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCcc---------ceEEEeeccc
Confidence 44567899999999999988888766554 8888888875
No 82
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.43 E-value=0.045 Score=61.60 Aligned_cols=137 Identities=22% Similarity=0.193 Sum_probs=77.1
Q ss_pred CceEEEEEEEecC--CCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcc-cccceEEEeCCCCCCC
Q 011426 78 GRALFYWLTEATH--NPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWN-TEANLLFLETPAGVGF 154 (486)
Q Consensus 78 ~~~lfy~f~es~~--~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~-~~a~~l~iD~PvGtGf 154 (486)
|-.+++++.-..+ +.+.-|++++..||||+-+.. +. + .+..|.+.+. .-+=++.|| +-|+|+
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~------~-------~~~~~~~~~s~~g~~v~~vd-~RGs~~ 571 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SK------F-------SVDWNEVVVSSRGFAVLQVD-GRGSGG 571 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-ee------E-------EecHHHHhhccCCeEEEEEc-CCCcCC
Confidence 3456666654432 335679999999999943331 10 1 1222333222 234578888 778886
Q ss_pred CcccC-CCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeec
Q 011426 155 SYTNR-SSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGN 233 (486)
Q Consensus 155 Sy~~~-~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGn 233 (486)
.=..- ..-+..-++ ...+|.....+.+.+.+ ..-..++.|+|.||||...- .++..... --+|--+-.+
T Consensus 572 ~G~~~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t~----~~l~~~~~----~~fkcgvava 641 (755)
T KOG2100|consen 572 YGWDFRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLTL----KLLESDPG----DVFKCGVAVA 641 (755)
T ss_pred cchhHHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHHH----HHhhhCcC----ceEEEEEEec
Confidence 42211 000101122 23556666666666655 33445799999999996543 34433211 2255558889
Q ss_pred cccCcc
Q 011426 234 AVTDNY 239 (486)
Q Consensus 234 g~~d~~ 239 (486)
|++|..
T Consensus 642 PVtd~~ 647 (755)
T KOG2100|consen 642 PVTDWL 647 (755)
T ss_pred ceeeee
Confidence 998876
No 83
>PRK10162 acetyl esterase; Provisional
Probab=95.38 E-value=0.04 Score=55.60 Aligned_cols=65 Identities=6% Similarity=0.005 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
+++.+.++++.+.-+++. ....++.|+|+|.||+.+..++.++.+... .+..++|+++..|+++.
T Consensus 133 ~D~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~---~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI---DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC---CccChhheEEECCccCC
Confidence 334445555554443331 224579999999999999999987765421 11457889988887764
No 84
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.38 E-value=0.012 Score=55.30 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=60.5
Q ss_pred cccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhc
Q 011426 139 TEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNS 218 (486)
Q Consensus 139 ~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~ 218 (486)
+-..|+.+|.+-+.||+..-...... ..-....+|+.++++...++. ......+.|+|.||||+.+-.++.+-.
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~-~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~~---- 86 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRG-DWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQHP---- 86 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTT-GTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHTC----
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhc-cccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcccc----
Confidence 45689999999777776642221111 123456788888777665544 445568999999999999888776221
Q ss_pred CCCCcceeeEEEeeccccCccc
Q 011426 219 KSKHPINLKGIMVGNAVTDNYY 240 (486)
Q Consensus 219 ~~~~~inLkGi~IGng~~d~~~ 240 (486)
-.++.++.++|.+|...
T Consensus 87 -----~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 87 -----DRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp -----CGSSEEEEESE-SSTTC
T ss_pred -----eeeeeeeccceecchhc
Confidence 22799999999988764
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.15 E-value=0.012 Score=60.77 Aligned_cols=82 Identities=22% Similarity=0.218 Sum_probs=54.3
Q ss_pred cccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhc
Q 011426 139 TEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNS 218 (486)
Q Consensus 139 ~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~ 218 (486)
.-.+||=+|-| |||+|.... + + ++...++..+..|+...|+.....+.++|-|.||.|++.+|..=.++
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l---~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-- 285 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---L---T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-- 285 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--
T ss_pred CCCEEEEEccC-CCcccccCC---C---C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc--
Confidence 44589999999 999984221 1 1 12344666777778889998888999999999999999998532222
Q ss_pred CCCCcceeeEEEeeccccCc
Q 011426 219 KSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 219 ~~~~~inLkGi~IGng~~d~ 238 (486)
|||++.-.|.++.
T Consensus 286 -------lkavV~~Ga~vh~ 298 (411)
T PF06500_consen 286 -------LKAVVALGAPVHH 298 (411)
T ss_dssp --------SEEEEES---SC
T ss_pred -------eeeEeeeCchHhh
Confidence 8998877776544
No 86
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.84 E-value=0.054 Score=46.94 Aligned_cols=96 Identities=23% Similarity=0.314 Sum_probs=59.9
Q ss_pred ceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHH
Q 011426 97 LVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSL 176 (486)
Q Consensus 97 ~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~ 176 (486)
+||+++|+.|.... +..+.+ .+. .+-.+++.+|.| |.|.+. ....+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~-----------~l~------~~G~~v~~~~~~-~~~~~~-----------~~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE-----------ALA------EQGYAVVAFDYP-GHGDSD-----------GADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH-----------HHH------HTTEEEEEESCT-TSTTSH-----------HSHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH-----------HHH------HCCCEEEEEecC-CCCccc-----------hhHHHHHHH
Confidence 58999999887665 333333 111 113578888987 444431 112344444
Q ss_pred HHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 177 QFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 177 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
+.+. ..++ ..++++|+|+|.||..+..++.+- -.+++++..+|+.+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~----------~~v~~~v~~~~~~~ 96 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN----------PRVKAVVLLSPYPD 96 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS----------TTESEEEEESESSG
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc----------cceeEEEEecCccc
Confidence 4433 3333 356999999999999888777633 12899999999533
No 87
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.75 E-value=0.15 Score=52.44 Aligned_cols=132 Identities=17% Similarity=0.293 Sum_probs=80.1
Q ss_pred eeeEEecCCCCceEEEEEEEecC----CCCCCCceEeeCCCCChhhhc-----hhhhcccCCeEEcCCCCceecCCCCcc
Q 011426 68 SGYVPVNKVPGRALFYWLTEATH----NPLNKPLVVWLNGGPGCSSVA-----YGASEEIGPFRINKTASGLYLNKLSWN 138 (486)
Q Consensus 68 sGy~~v~~~~~~~lfy~f~es~~----~~~~~P~~lwlnGGPG~ss~~-----~g~~~E~GP~~~~~~~~~l~~n~~sw~ 138 (486)
.-+|...+. |.-..=|+..... +..++|+++.+.|=+|.|.-. ....++.| ++
T Consensus 95 Reii~~~DG-G~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r---------------- 156 (409)
T KOG1838|consen 95 REIIKTSDG-GTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR---------------- 156 (409)
T ss_pred eEEEEeCCC-CEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE----------------
Confidence 445555442 3334445543321 246789999999999999621 24445555 33
Q ss_pred cccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhc
Q 011426 139 TEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNS 218 (486)
Q Consensus 139 ~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~ 218 (486)
++-+- +-|-|-|--.+..-|. .+..++-+.+.++|+ ++|| .+++|.+|.|+||.. +..++-+..+
T Consensus 157 ----~VVfN-~RG~~g~~LtTpr~f~-ag~t~Dl~~~v~~i~---~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~ 221 (409)
T KOG1838|consen 157 ----VVVFN-HRGLGGSKLTTPRLFT-AGWTEDLREVVNHIK---KRYP---QAPLFAVGFSMGGNI---LTNYLGEEGD 221 (409)
T ss_pred ----EEEEC-CCCCCCCccCCCceee-cCCHHHHHHHHHHHH---HhCC---CCceEEEEecchHHH---HHHHhhhccC
Confidence 22222 6688877655554342 344444444444444 6899 679999999999865 5566665533
Q ss_pred CCCCcceeeEEEeeccc
Q 011426 219 KSKHPINLKGIMVGNAV 235 (486)
Q Consensus 219 ~~~~~inLkGi~IGng~ 235 (486)
+ .-=..|++|-|||
T Consensus 222 ~---~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 222 N---TPLIAAVAVCNPW 235 (409)
T ss_pred C---CCceeEEEEeccc
Confidence 2 2346788888887
No 88
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=93.77 E-value=0.13 Score=48.12 Aligned_cols=123 Identities=21% Similarity=0.301 Sum_probs=80.3
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
.-.|.=|...+++ .+|++|+++|--|- | |.+.-+ .+. .. =+-..||+-+|-- |-|-|-+
T Consensus 64 ~vtL~a~~~~~E~---S~pTlLyfh~NAGN--m--Ghr~~i------~~~--fy-----~~l~mnv~ivsYR-GYG~S~G 122 (300)
T KOG4391|consen 64 KVTLDAYLMLSES---SRPTLLYFHANAGN--M--GHRLPI------ARV--FY-----VNLKMNVLIVSYR-GYGKSEG 122 (300)
T ss_pred ceeEeeeeecccC---CCceEEEEccCCCc--c--cchhhH------HHH--HH-----HHcCceEEEEEee-ccccCCC
Confidence 3456666555543 88999999977665 2 222211 110 00 0334689999965 6666665
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
.++.. +..-+|+...+ .+...|...++++.++|.|-||.-+-.+|..-.+. +.++++-|-+++
T Consensus 123 spsE~----GL~lDs~avld----yl~t~~~~dktkivlfGrSlGGAvai~lask~~~r---------i~~~ivENTF~S 185 (300)
T KOG4391|consen 123 SPSEE----GLKLDSEAVLD----YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR---------ISAIIVENTFLS 185 (300)
T ss_pred Ccccc----ceeccHHHHHH----HHhcCccCCcceEEEEecccCCeeEEEeeccchhh---------eeeeeeechhcc
Confidence 54442 22223443333 33568888889999999999999999999877665 889999998776
Q ss_pred c
Q 011426 238 N 238 (486)
Q Consensus 238 ~ 238 (486)
-
T Consensus 186 I 186 (300)
T KOG4391|consen 186 I 186 (300)
T ss_pred c
Confidence 4
No 89
>PRK11460 putative hydrolase; Provisional
Probab=93.31 E-value=0.25 Score=47.33 Aligned_cols=53 Identities=8% Similarity=-0.006 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 174 DSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 174 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
.+.++++.+.++. ....++++|+|.|.||..+-.++.+- .. .+.+++..+|.+
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~---~~------~~~~vv~~sg~~ 138 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAE---PG------LAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhC---CC------cceEEEEecccc
Confidence 3444444443332 33456799999999999887766432 11 145566666653
No 90
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.98 E-value=0.16 Score=54.38 Aligned_cols=59 Identities=17% Similarity=0.085 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
+....++++++-...|.. ..+++.|+|||+||+-+-.++..-... --++++++-+|...
T Consensus 156 D~~~al~wv~~~i~~fgg-d~~~v~~~G~SaG~~~~~~~~~~~~~~-------~lf~~~i~~sg~~~ 214 (493)
T cd00312 156 DQRLALKWVQDNIAAFGG-DPDSVTIFGESAGGASVSLLLLSPDSK-------GLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHhCC-CcceEEEEeecHHHHHhhhHhhCcchh-------HHHHHHhhhcCCcc
Confidence 455566777777666642 345799999999998665554321111 12566666666543
No 91
>PRK11071 esterase YqiA; Provisional
Probab=92.86 E-value=0.12 Score=48.10 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=43.6
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
..+|+|.+|..|-++|+.-+....++. ..+.+.||+|.. ...+..++.+.+
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~---------------------------~~~~~~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC---------------------------RQTVEEGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc---------------------------ceEEECCCCcch--hhHHHhHHHHHH
Confidence 468999999999999999888876642 245779999998 344888899999
Q ss_pred HHc
Q 011426 476 FLR 478 (486)
Q Consensus 476 fl~ 478 (486)
|+.
T Consensus 187 fl~ 189 (190)
T PRK11071 187 FLG 189 (190)
T ss_pred Hhc
Confidence 974
No 92
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=92.54 E-value=1.3 Score=44.35 Aligned_cols=45 Identities=16% Similarity=0.058 Sum_probs=38.3
Q ss_pred CCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCccc
Q 011426 191 GREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNYY 240 (486)
Q Consensus 191 ~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~~ 240 (486)
.+++.|+|+|-||+.+..++....+... ...++.++..|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~~-----~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRGL-----PLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcCC-----CCceEEEEEecccCCcc
Confidence 4679999999999999999998877522 45889999999998875
No 93
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=92.23 E-value=0.1 Score=49.24 Aligned_cols=59 Identities=14% Similarity=0.035 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
+.++.+.++|....+.. ...++++|.|-|-||..+-.++.+..+ .+.|++..+|++-..
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p~---------~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYPE---------PLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTSS---------TSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcCc---------CcCEEEEeecccccc
Confidence 34445555555544432 446789999999999888887754322 389999999987554
No 94
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=91.58 E-value=0.84 Score=44.95 Aligned_cols=92 Identities=11% Similarity=0.102 Sum_probs=51.7
Q ss_pred ccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHh
Q 011426 138 NTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHN 217 (486)
Q Consensus 138 ~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n 217 (486)
.+.+-++=||.| |-...=..-..+|...+.++-|+++.+.|+.|= =+.++-+|+--|+.....+|..-.+.
T Consensus 53 ~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~-------lk~vIg~GvGAGAnIL~rfAl~~p~~- 123 (283)
T PF03096_consen 53 LQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFG-------LKSVIGFGVGAGANILARFALKHPER- 123 (283)
T ss_dssp HTTSEEEEEE-T-TTSTT-----TT-----HHHHHCTHHHHHHHHT----------EEEEEETHHHHHHHHHHHHSGGG-
T ss_pred hhceEEEEEeCC-CCCCCcccccccccccCHHHHHHHHHHHHHhCC-------ccEEEEEeeccchhhhhhccccCccc-
Confidence 566788889988 555433333344333478889998877776442 34699999998887777777533333
Q ss_pred cCCCCcceeeEEEeeccccCcccccccchhhhc
Q 011426 218 SKSKHPINLKGIMVGNAVTDNYYDNLGTVTYWW 250 (486)
Q Consensus 218 ~~~~~~inLkGi~IGng~~d~~~~~~~~~~~a~ 250 (486)
+-|+++.|+... ..++.++++
T Consensus 124 --------V~GLiLvn~~~~----~~gw~Ew~~ 144 (283)
T PF03096_consen 124 --------VLGLILVNPTCT----AAGWMEWFY 144 (283)
T ss_dssp --------EEEEEEES---S-------HHHHHH
T ss_pred --------eeEEEEEecCCC----CccHHHHHH
Confidence 899999987543 345555543
No 95
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=91.35 E-value=0.38 Score=44.80 Aligned_cols=63 Identities=21% Similarity=0.178 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHh---CCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 170 RTAKDSLQFLIRWIDR---FPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~---fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
+..+|+.++++-..+. + .+...+++|+|+|-||+.+..++..+.+... ..++|+++.+|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~-----~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL-----PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT-----CHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc-----cchhhhhcccccccc
Confidence 3444555444433332 1 2445689999999999999999988877632 349999999999877
No 96
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=91.29 E-value=0.41 Score=44.83 Aligned_cols=64 Identities=19% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChH-HHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPR-AALQLF 473 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~-~a~~mi 473 (486)
...+|||.+|+.|.+||...++.+.+.|.-.+. ...+.++.++||-....+.. ...+.+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~--------------------~~~~~~~p~~gH~~~~~~~~~~~~~~~ 202 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGK--------------------PVELLIFPGEGHGFGNPENRRDWYERI 202 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS--------------------SEEEEEETT-SSSTTSHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCC--------------------CEEEEEcCcCCCCCCCchhHHHHHHHH
Confidence 468999999999999999999999999863332 46788999999965533332 334555
Q ss_pred HHHHc
Q 011426 474 KSFLR 478 (486)
Q Consensus 474 ~~fl~ 478 (486)
-+|+.
T Consensus 203 ~~f~~ 207 (213)
T PF00326_consen 203 LDFFD 207 (213)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55553
No 97
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.18 E-value=0.76 Score=40.73 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
..++.+...+++...++| ..+++|+|||.||..+-.+|.++.++
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 345556666666666667 56899999999999999999888765
No 98
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.05 E-value=0.66 Score=40.17 Aligned_cols=62 Identities=19% Similarity=0.327 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
...+.+.+.|++..+++| +.++.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~--~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS--SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT--STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc--cccceeeeecCCccc
Confidence 445577788888888888 46899999999999999999999886432 125677777777654
No 99
>PRK11460 putative hydrolase; Provisional
Probab=89.95 E-value=0.56 Score=44.93 Aligned_cols=62 Identities=18% Similarity=0.190 Sum_probs=46.9
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
+.+|++.+|..|.++|+..++...+.|+=.+ .+.++..+.++||.+..+.-+.+.+.|++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g--------------------~~~~~~~~~~~gH~i~~~~~~~~~~~l~~ 207 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLG--------------------GDVTLDIVEDLGHAIDPRLMQFALDRLRY 207 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCC--------------------CCeEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999988888774111 14677888999999976555555555555
Q ss_pred HH
Q 011426 476 FL 477 (486)
Q Consensus 476 fl 477 (486)
++
T Consensus 208 ~l 209 (232)
T PRK11460 208 TV 209 (232)
T ss_pred Hc
Confidence 55
No 100
>PRK10566 esterase; Provisional
Probab=89.58 E-value=0.5 Score=45.18 Aligned_cols=111 Identities=13% Similarity=0.064 Sum_probs=61.7
Q ss_pred EEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCC
Q 011426 82 FYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSS 161 (486)
Q Consensus 82 fy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~ 161 (486)
+|..+++...+...|+||+++|++|.... +..+.. .+. ..-.+++.+|.| |.|-|+.....
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~-----------~l~------~~G~~v~~~d~~-g~G~~~~~~~~ 74 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFAV-----------ALA------QAGFRVIMPDAP-MHGARFSGDEA 74 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHHH-----------HHH------hCCCEEEEecCC-cccccCCCccc
Confidence 34444443223457999999999887654 221111 111 123589999987 66655432111
Q ss_pred CCc---cCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHH
Q 011426 162 DLL---DTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLARE 212 (486)
Q Consensus 162 ~~~---~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 212 (486)
... ........+++..++ .++...+....++++|+|+|+||..+..++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 75 RRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred cchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 100 000012344554444 34444444445689999999999998877653
No 101
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=89.39 E-value=0.48 Score=45.57 Aligned_cols=67 Identities=9% Similarity=0.109 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
..+..+.+||+...+.. ..++++|.+||.|+..+-.....+..........-.|..+++.+|-+|..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 44555555555544432 25789999999999998888877776643100114688899999887764
No 102
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=89.33 E-value=0.86 Score=43.37 Aligned_cols=59 Identities=17% Similarity=0.269 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
..+++...++...+++| +.+++++|||.||-.+-.+|..+.++.. ..+++.+..|.|-+
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~~----~~~i~~~tFg~P~v 168 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRGP----GSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhCC----CCceEEEEeCCCCC
Confidence 34455566666666666 5679999999999999988888876531 15588888888765
No 103
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=89.10 E-value=1.7 Score=52.19 Aligned_cols=103 Identities=13% Similarity=0.154 Sum_probs=68.2
Q ss_pred CCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHH
Q 011426 95 KPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKD 174 (486)
Q Consensus 95 ~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~ 174 (486)
.|.++.++|+.|.+.. |..+.+. + .....++-+|.| |.|-+ . ... .+.++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~-----------l-------~~~~~v~~~~~~-g~~~~--~-~~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRY-----------L-------DPQWSIYGIQSP-RPDGP--M-QTA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHh-----------c-------CCCCcEEEEECC-CCCCC--C-CCC---CCHHHHHHH
Confidence 4678999999998776 4332220 1 223577888988 44422 1 111 366778888
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 175 SLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 175 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
+.+.++. ..| ..|+.++|+|+||..+-.+|.++.+... .+..+++.++.
T Consensus 1122 ~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~~------~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARGE------EVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcCC------ceeEEEEecCC
Confidence 7777764 233 3589999999999999999988876532 36666666653
No 104
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=89.05 E-value=1.3 Score=46.42 Aligned_cols=36 Identities=8% Similarity=0.079 Sum_probs=28.2
Q ss_pred CceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 192 REVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 192 ~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
....|+|.|+||.-+-.++.+-.+. +.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~---------Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPER---------FGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCccc---------ccEEEEeccce
Confidence 3589999999999888887655443 78888888864
No 105
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.00 E-value=2.6 Score=41.13 Aligned_cols=103 Identities=16% Similarity=0.196 Sum_probs=66.7
Q ss_pred CceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHH
Q 011426 96 PLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDS 175 (486)
Q Consensus 96 P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~ 175 (486)
|.+|+++++=|.-...-.+..+.+|- .-++-++.| |+--.... . .+.++.|+.-
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-------------------~~v~~l~a~---g~~~~~~~--~--~~l~~~a~~y 54 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-------------------LPVYGLQAP---GYGAGEQP--F--ASLDDMAAAY 54 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-------------------ceeeccccC---cccccccc--c--CCHHHHHHHH
Confidence 67899988877643311223333332 246677877 33221211 1 2667777777
Q ss_pred HHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 176 LQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 176 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
.+.|+ +..|+ -|.+|.|.|+||..+=.+|.++..+.+. +.=++|.+...
T Consensus 55 v~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~~------Va~L~llD~~~ 103 (257)
T COG3319 55 VAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGEE------VAFLGLLDAVP 103 (257)
T ss_pred HHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCCe------EEEEEEeccCC
Confidence 77776 57884 4999999999999999999999887543 55566655443
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=88.83 E-value=0.54 Score=43.59 Aligned_cols=50 Identities=28% Similarity=0.355 Sum_probs=35.8
Q ss_pred HHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcccc
Q 011426 177 QFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNYYD 241 (486)
Q Consensus 177 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~~~ 241 (486)
+.+.+..+.. ....+.|+|.|.||.|+-.+|.+. +++. ++.||.+.|...
T Consensus 47 ~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~~-----------~~~a-vLiNPav~p~~~ 96 (187)
T PF05728_consen 47 AQLEQLIEEL---KPENVVLIGSSLGGFYATYLAERY-----------GLPA-VLINPAVRPYEL 96 (187)
T ss_pred HHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHHh-----------CCCE-EEEcCCCCHHHH
Confidence 3344444433 244599999999999999998755 2555 888999998654
No 107
>PLN02454 triacylglycerol lipase
Probab=88.79 E-value=1.1 Score=46.54 Aligned_cols=69 Identities=19% Similarity=0.237 Sum_probs=52.5
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
...+.+++...|+...+++|.++ ..++++|||.||-.+-..|..|.+.... ...+++..+..|.|-+..
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~-~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS-GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc-ccCCceEEEEeCCCcccC
Confidence 34678899999999999998764 3699999999999999888888775321 112567778888886643
No 108
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=88.69 E-value=1.2 Score=46.92 Aligned_cols=91 Identities=15% Similarity=0.092 Sum_probs=54.7
Q ss_pred ccceEEEeCCCCCCCCcc-----cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHH
Q 011426 140 EANLLFLETPAGVGFSYT-----NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIM 214 (486)
Q Consensus 140 ~a~~l~iD~PvGtGfSy~-----~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~ 214 (486)
.|-||++|.- ==|-|.. ...-.| -+.+|+.+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+-.
T Consensus 59 ~a~~v~lEHR-yYG~S~P~~~~s~~nL~y--Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP 135 (434)
T PF05577_consen 59 GALVVALEHR-YYGKSQPFGDLSTENLRY--LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP 135 (434)
T ss_dssp TEEEEEE--T-TSTTB-TTGGGGGSTTTC---SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T
T ss_pred CCcEEEeehh-hhcCCCCccccchhhHHh--cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC
Confidence 4567777754 2222321 111123 3789999999999999887776667789999999999987766655443
Q ss_pred HHhcCCCCcceeeEEEeeccccCccccc
Q 011426 215 IHNSKSKHPINLKGIMVGNAVTDNYYDN 242 (486)
Q Consensus 215 ~~n~~~~~~inLkGi~IGng~~d~~~~~ 242 (486)
+- +.|.+--++.+....+.
T Consensus 136 ~~---------~~ga~ASSapv~a~~df 154 (434)
T PF05577_consen 136 HL---------FDGAWASSAPVQAKVDF 154 (434)
T ss_dssp TT----------SEEEEET--CCHCCTT
T ss_pred Ce---------eEEEEeccceeeeeccc
Confidence 32 66777667666554443
No 109
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=88.40 E-value=0.74 Score=45.14 Aligned_cols=83 Identities=23% Similarity=0.231 Sum_probs=55.5
Q ss_pred cceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCC
Q 011426 141 ANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKS 220 (486)
Q Consensus 141 a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 220 (486)
..+|..| .-|+|-|-+.-... ..+.++|.++.| +|+.+.|.- +-++-++|.||+|.....+|..-.
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~-----~~~e~~D~~d~I-~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~~~------ 123 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM-----SPNEAQDGYDTI-EWIAAQPWS-NGKVGMYGISYGGFTQWAAAARRP------ 123 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT-----SHHHHHHHHHHH-HHHHHCTTE-EEEEEEEEETHHHHHHHHHHTTT-------
T ss_pred CEEEEEC-CcccccCCCccccC-----ChhHHHHHHHHH-HHHHhCCCC-CCeEEeeccCHHHHHHHHHHhcCC------
Confidence 4789999 55999887764331 344566666643 577777644 447999999999999888876222
Q ss_pred CCcceeeEEEeeccccCccc
Q 011426 221 KHPINLKGIMVGNAVTDNYY 240 (486)
Q Consensus 221 ~~~inLkGi~IGng~~d~~~ 240 (486)
-.||.|+...+..|...
T Consensus 124 ---p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 124 ---PHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred ---CCceEEEecccCCcccc
Confidence 33999999988777654
No 110
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=88.23 E-value=1 Score=50.93 Aligned_cols=90 Identities=18% Similarity=0.245 Sum_probs=56.5
Q ss_pred CCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhC--------------CCCCCCceEEEc
Q 011426 133 NKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRF--------------PRYKGREVYLTG 198 (486)
Q Consensus 133 n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~f--------------p~~~~~~~yi~G 198 (486)
+.+=...-..+|++|. .|+|-|-+.... ...+..+|..+.|. |+... -.|.+-++-++|
T Consensus 272 ~~~~~~rGYaVV~~D~-RGtg~SeG~~~~-----~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G 344 (767)
T PRK05371 272 NDYFLPRGFAVVYVSG-IGTRGSDGCPTT-----GDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTG 344 (767)
T ss_pred HHHHHhCCeEEEEEcC-CCCCCCCCcCcc-----CCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEE
Confidence 3344445789999995 599988765322 12233344433332 55422 123356899999
Q ss_pred cccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 199 ESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 199 ESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
.||||...-.+|..-. -.||.|+-..|+.+.
T Consensus 345 ~SY~G~~~~~aAa~~p---------p~LkAIVp~a~is~~ 375 (767)
T PRK05371 345 KSYLGTLPNAVATTGV---------EGLETIIPEAAISSW 375 (767)
T ss_pred EcHHHHHHHHHHhhCC---------CcceEEEeeCCCCcH
Confidence 9999988777765322 239999988887654
No 111
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=88.01 E-value=0.94 Score=47.78 Aligned_cols=41 Identities=17% Similarity=0.083 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHH
Q 011426 169 GRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLARE 212 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 212 (486)
++..+++.+.++..++..+ .+++.|+|||.||..+-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 4567888888888888665 6799999999999887776654
No 112
>COG4099 Predicted peptidase [General function prediction only]
Probab=87.90 E-value=8.1 Score=38.25 Aligned_cols=127 Identities=20% Similarity=0.210 Sum_probs=71.6
Q ss_pred CCCceEEEEEEEecC-CC--CCCCceEeeCCCCChhhhc-------hhhhcccCCeEEcCCCCceecCCCCcccccceEE
Q 011426 76 VPGRALFYWLTEATH-NP--LNKPLVVWLNGGPGCSSVA-------YGASEEIGPFRINKTASGLYLNKLSWNTEANLLF 145 (486)
Q Consensus 76 ~~~~~lfy~f~es~~-~~--~~~P~~lwlnGGPG~ss~~-------~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~ 145 (486)
..|.+|=|-+|.-.. +| +.-||+|||||+=-.++-. .|...+.||- .=.|
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pe--------------------dqcf 228 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPE--------------------DQCF 228 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeeccc--------------------CceE
Confidence 457789999886532 33 3349999999874433310 2444444441 1144
Q ss_pred EeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcce
Q 011426 146 LETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPIN 225 (486)
Q Consensus 146 iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~in 225 (486)
|=.| -|+--=...+- +.+.--....+.+.+=+..++.-..+.+|++|-|-||.-.-+++.+..+-
T Consensus 229 VlAP---Qy~~if~d~e~---~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf--------- 293 (387)
T COG4099 229 VLAP---QYNPIFADSEE---KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF--------- 293 (387)
T ss_pred EEcc---ccccccccccc---ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh---------
Confidence 4445 22221111110 11112222334444444456666677899999999999888887766654
Q ss_pred eeEEEeeccccC
Q 011426 226 LKGIMVGNAVTD 237 (486)
Q Consensus 226 LkGi~IGng~~d 237 (486)
+.+.+..+|-=|
T Consensus 294 FAaa~~iaG~~d 305 (387)
T COG4099 294 FAAAVPIAGGGD 305 (387)
T ss_pred hheeeeecCCCc
Confidence 777777766544
No 113
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=87.30 E-value=1.1 Score=44.62 Aligned_cols=61 Identities=21% Similarity=0.173 Sum_probs=46.9
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~ 474 (486)
..-+||+..|-.+--++..-........ .+..+..+.+|||+|..|+|+...+.|.
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~f------------------------p~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKIF------------------------PNVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHhc------------------------cchheeecccCCceeecCCHHHHHHHHH
Confidence 4578999999988877766544433332 2345677888999999999999999999
Q ss_pred HHHcC
Q 011426 475 SFLRG 479 (486)
Q Consensus 475 ~fl~~ 479 (486)
+|+..
T Consensus 308 ~Fl~~ 312 (315)
T KOG2382|consen 308 EFLEE 312 (315)
T ss_pred HHhcc
Confidence 99864
No 114
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=86.62 E-value=1.6 Score=42.80 Aligned_cols=59 Identities=10% Similarity=-0.015 Sum_probs=48.5
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
.+++++..|..|.++|..-.+.+++.+. +-..+.+. +||+.+..+|+.....|.+
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~------------------------~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP------------------------PSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC------------------------ccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 5899999999999999988887777653 11456675 9999999999999999988
Q ss_pred HHcC
Q 011426 476 FLRG 479 (486)
Q Consensus 476 fl~~ 479 (486)
+...
T Consensus 266 ~a~~ 269 (273)
T PLN02211 266 AAAS 269 (273)
T ss_pred HHHH
Confidence 8654
No 115
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=85.91 E-value=1.2 Score=41.84 Aligned_cols=59 Identities=27% Similarity=0.455 Sum_probs=41.5
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
+.+|++.+|+.|.++|....+...+.|.=.+ .+++|.++.|.||-++ .+.+..+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~--------------------~~v~~~~~~g~gH~i~----~~~~~~~~~ 210 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAG--------------------ANVEFHEYPGGGHEIS----PEELRDLRE 210 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT---------------------GEEEEEETT-SSS------HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcC--------------------CCEEEEEcCCCCCCCC----HHHHHHHHH
Confidence 5899999999999999998887777663111 1578889999999986 456667777
Q ss_pred HHc
Q 011426 476 FLR 478 (486)
Q Consensus 476 fl~ 478 (486)
||.
T Consensus 211 ~l~ 213 (216)
T PF02230_consen 211 FLE 213 (216)
T ss_dssp HHH
T ss_pred HHh
Confidence 775
No 116
>COG0400 Predicted esterase [General function prediction only]
Probab=85.64 E-value=4.4 Score=38.20 Aligned_cols=80 Identities=13% Similarity=0.092 Sum_probs=54.1
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcccc---cc
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNYYD---NL 243 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~~~---~~ 243 (486)
+....+..+.+||....+.+.- ..+++++.|-|=|+.++..+.....+ .++|+++-+|..-+..+ ..
T Consensus 75 dl~~~~~~~~~~l~~~~~~~gi-~~~~ii~~GfSqGA~ial~~~l~~~~---------~~~~ail~~g~~~~~~~~~~~~ 144 (207)
T COG0400 75 DLDLETEKLAEFLEELAEEYGI-DSSRIILIGFSQGANIALSLGLTLPG---------LFAGAILFSGMLPLEPELLPDL 144 (207)
T ss_pred hHHHHHHHHHHHHHHHHHHhCC-ChhheEEEecChHHHHHHHHHHhCch---------hhccchhcCCcCCCCCcccccc
Confidence 3445667788888888877643 34689999999999887777654433 38888888887765532 23
Q ss_pred cchhhhcccccCC
Q 011426 244 GTVTYWWSHAMIS 256 (486)
Q Consensus 244 ~~~~~a~~~glI~ 256 (486)
...+....||--|
T Consensus 145 ~~~pill~hG~~D 157 (207)
T COG0400 145 AGTPILLSHGTED 157 (207)
T ss_pred CCCeEEEeccCcC
Confidence 3445555666444
No 117
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=85.26 E-value=2.5 Score=42.07 Aligned_cols=70 Identities=23% Similarity=0.349 Sum_probs=52.1
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccc--cCChHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVP--LFKPRAALQL 472 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP--~dqP~~a~~m 472 (486)
.+.+|+||+|..|-++|+..++..++++-=.|. .+++|.++.+++|+.. ...|. ++.-
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~-------------------a~V~~~~~~~~~H~~~~~~~~~~-a~~W 277 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGG-------------------ADVEYVRYPGGGHLGAAFASAPD-ALAW 277 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCC-------------------CCEEEEecCCCChhhhhhcCcHH-HHHH
Confidence 368999999999999999999999888632120 2688999999999964 46664 4455
Q ss_pred HHHHHcCCCCCC
Q 011426 473 FKSFLRGDPLPK 484 (486)
Q Consensus 473 i~~fl~~~~l~~ 484 (486)
|++=+.|++.++
T Consensus 278 l~~rf~G~~~~~ 289 (290)
T PF03583_consen 278 LDDRFAGKPATS 289 (290)
T ss_pred HHHHHCCCCCCC
Confidence 555556777654
No 118
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=85.16 E-value=1.6 Score=40.35 Aligned_cols=64 Identities=16% Similarity=0.235 Sum_probs=53.0
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
+.+++|.|+-+.++.+.++ ++.+++.|+|-|+|.=.+|.+..+|...-+ =.++++++..+-...
T Consensus 46 tP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r-----~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALR-----ARVAQVVLLSPSTTA 109 (192)
T ss_pred CHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHH-----hheeEEEEeccCCcc
Confidence 6789999999999998884 447899999999999999999999987654 248888888775433
No 119
>PRK13604 luxD acyl transferase; Provisional
Probab=84.97 E-value=5 Score=40.16 Aligned_cols=123 Identities=12% Similarity=0.133 Sum_probs=68.5
Q ss_pred CceEEEEEEEec-CCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCc
Q 011426 78 GRALFYWLTEAT-HNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSY 156 (486)
Q Consensus 78 ~~~lfy~f~es~-~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy 156 (486)
|..|.=|+.+.+ +++...|++|..+ |.|+....+ ...-.+=+.+-.++|-.|.--|.|=|-
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~~-----------------~~~A~~La~~G~~vLrfD~rg~~GeS~ 80 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIAS-GFARRMDHF-----------------AGLAEYLSSNGFHVIRYDSLHHVGLSS 80 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChHHH-----------------HHHHHHHHHCCCEEEEecCCCCCCCCC
Confidence 667777777664 3355667777765 445542101 111223334556899999654568773
Q ss_pred ccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 157 TNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
++-. +...+.-..++....++++ ... ..++.|.|+|.||.-+...|. . .+++++++.+|+.
T Consensus 81 G~~~-~~t~s~g~~Dl~aaid~lk----~~~---~~~I~LiG~SmGgava~~~A~----~-------~~v~~lI~~sp~~ 141 (307)
T PRK13604 81 GTID-EFTMSIGKNSLLTVVDWLN----TRG---INNLGLIAASLSARIAYEVIN----E-------IDLSFLITAVGVV 141 (307)
T ss_pred Cccc-cCcccccHHHHHHHHHHHH----hcC---CCceEEEEECHHHHHHHHHhc----C-------CCCCEEEEcCCcc
Confidence 3221 1111112223333344443 322 347999999999987533332 1 3488899998876
Q ss_pred C
Q 011426 237 D 237 (486)
Q Consensus 237 d 237 (486)
+
T Consensus 142 ~ 142 (307)
T PRK13604 142 N 142 (307)
T ss_pred c
Confidence 5
No 120
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=84.95 E-value=3.5 Score=37.46 Aligned_cols=76 Identities=14% Similarity=0.202 Sum_probs=48.0
Q ss_pred ccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcC
Q 011426 140 EANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSK 219 (486)
Q Consensus 140 ~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~ 219 (486)
...++.+|.| |.|.+ .... .+.+..++.....+. ...+ ..++.++|+|+||..+-.++..+.+...
T Consensus 25 ~~~v~~~~~~-g~~~~--~~~~----~~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~~- 90 (212)
T smart00824 25 RRDVSALPLP-GFGPG--EPLP----ASADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARGI- 90 (212)
T ss_pred CccEEEecCC-CCCCC--CCCC----CCHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCCC-
Confidence 4578899977 44432 1111 234445555544444 2333 4689999999999999999988876532
Q ss_pred CCCcceeeEEEeecc
Q 011426 220 SKHPINLKGIMVGNA 234 (486)
Q Consensus 220 ~~~~inLkGi~IGng 234 (486)
.++++++.++
T Consensus 91 -----~~~~l~~~~~ 100 (212)
T smart00824 91 -----PPAAVVLLDT 100 (212)
T ss_pred -----CCcEEEEEcc
Confidence 2667766654
No 121
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=84.79 E-value=3.6 Score=44.61 Aligned_cols=126 Identities=21% Similarity=0.249 Sum_probs=72.2
Q ss_pred CceEEEEEEEecC--CC-CCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCccccc----------ceE
Q 011426 78 GRALFYWLTEATH--NP-LNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEA----------NLL 144 (486)
Q Consensus 78 ~~~lfy~f~es~~--~~-~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a----------~~l 144 (486)
+.-+.|-..-..+ +| +.-|+++.+-||||. .++.|.++|.+.. -|+
T Consensus 622 tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~V---------------------QlVnnsfkgi~ylR~~~LaslGy~Vv 680 (867)
T KOG2281|consen 622 TGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGV---------------------QLVNNSFKGIQYLRFCRLASLGYVVV 680 (867)
T ss_pred CCcEEEEEEEccccCCCCCCCceEEEEcCCCce---------------------EEeeccccceehhhhhhhhhcceEEE
Confidence 3445566554433 33 458999999999986 3566777776543 368
Q ss_pred EEeCCCCCCCCcccCCCCC----c-cCCcHHHHHHHHHHHHHHHHhCCCCCC-CceEEEccccccccHHHHHHHHHHHhc
Q 011426 145 FLETPAGVGFSYTNRSSDL----L-DTGDGRTAKDSLQFLIRWIDRFPRYKG-REVYLTGESYAGHYVPQLAREIMIHNS 218 (486)
Q Consensus 145 ~iD~PvGtGfSy~~~~~~~----~-~~~~~~~a~~~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~n~ 218 (486)
+||.- |+- ..+..+ . .-+. -.++|-++-||-.-++.. |.. ..+-|-|-||||....+... +..+
T Consensus 681 ~IDnR-GS~----hRGlkFE~~ik~kmGq-VE~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~L~---~~P~ 750 (867)
T KOG2281|consen 681 FIDNR-GSA----HRGLKFESHIKKKMGQ-VEVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMGLA---QYPN 750 (867)
T ss_pred EEcCC-Ccc----ccchhhHHHHhhccCe-eeehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHHhh---cCcc
Confidence 89954 221 111000 0 0011 124444555655545432 322 35899999999976554432 2221
Q ss_pred CCCCcceeeEEEeeccccCccc
Q 011426 219 KSKHPINLKGIMVGNAVTDNYY 240 (486)
Q Consensus 219 ~~~~~inLkGi~IGng~~d~~~ 240 (486)
-++-.+-|.|+++...
T Consensus 751 ------IfrvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 751 ------IFRVAIAGAPVTDWRL 766 (867)
T ss_pred ------eeeEEeccCcceeeee
Confidence 2677778889888764
No 122
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=84.67 E-value=2.8 Score=38.47 Aligned_cols=62 Identities=27% Similarity=0.328 Sum_probs=44.9
Q ss_pred hCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHH
Q 011426 394 AGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLF 473 (486)
Q Consensus 394 ~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi 473 (486)
....++++..|+.|.+.+......+...+.. ...++++.++||+...++|+...+.+
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPN-----------------------DARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-----------------------CceEEEeCCCCCcchhhcHHHHHHHH
Confidence 4469999999999966666544444444321 24678899999999999999777666
Q ss_pred HHHHc
Q 011426 474 KSFLR 478 (486)
Q Consensus 474 ~~fl~ 478 (486)
.+|+.
T Consensus 276 ~~~~~ 280 (282)
T COG0596 276 LAFLE 280 (282)
T ss_pred HHHHh
Confidence 66543
No 123
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=83.98 E-value=3.3 Score=40.07 Aligned_cols=109 Identities=19% Similarity=0.249 Sum_probs=71.2
Q ss_pred CCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHH
Q 011426 92 PLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRT 171 (486)
Q Consensus 92 ~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~ 171 (486)
....+++|+.+|= +.- .|.+.|+ ..+.|-.=..|++=.|-- |-|.|-+..... +.-.+
T Consensus 57 ~~~~~~lly~hGN---a~D-lgq~~~~-------------~~~l~~~ln~nv~~~DYS-GyG~S~G~psE~----n~y~D 114 (258)
T KOG1552|consen 57 EAAHPTLLYSHGN---AAD-LGQMVEL-------------FKELSIFLNCNVVSYDYS-GYGRSSGKPSER----NLYAD 114 (258)
T ss_pred cccceEEEEcCCc---ccc-hHHHHHH-------------HHHHhhcccceEEEEecc-cccccCCCcccc----cchhh
Confidence 3445999999876 332 2433321 223333445688889955 888887766553 66677
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 172 AKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 172 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
++..+++|++ ++- +..+++|+|.|-|..-.-.+| .+. .+.|+++-+|+++-
T Consensus 115 i~avye~Lr~---~~g--~~~~Iil~G~SiGt~~tv~La----sr~-------~~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 115 IKAVYEWLRN---RYG--SPERIILYGQSIGTVPTVDLA----SRY-------PLAAVVLHSPFTSG 165 (258)
T ss_pred HHHHHHHHHh---hcC--CCceEEEEEecCCchhhhhHh----hcC-------CcceEEEeccchhh
Confidence 8888888885 331 467899999999975422333 221 18999999988754
No 124
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.55 E-value=3.8 Score=39.47 Aligned_cols=102 Identities=23% Similarity=0.411 Sum_probs=52.8
Q ss_pred CCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHH
Q 011426 92 PLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRT 171 (486)
Q Consensus 92 ~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~ 171 (486)
.+++|+++|+-|-||-++. | +|.|=-....-..+ ..-|......| .+.|.-+==+-+....+. .+.+++
T Consensus 26 ~~~~~li~~IpGNPG~~gF-Y---~~F~~~L~~~l~~r--~~~wtIsh~~H---~~~P~sl~~~~s~~~~ei--fsL~~Q 94 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGF-Y---TEFARHLHLNLIDR--LPVWTISHAGH---ALMPASLREDHSHTNEEI--FSLQDQ 94 (301)
T ss_pred CCCceEEEEecCCCCchhH-H---HHHHHHHHHhcccc--cceeEEecccc---ccCCcccccccccccccc--cchhhH
Confidence 3789999999999998765 3 33221000000000 01122222222 223311111111111121 366677
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHH
Q 011426 172 AKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQL 209 (486)
Q Consensus 172 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~l 209 (486)
.+.=++|++++. | +++++||.|||=|...+-.+
T Consensus 95 V~HKlaFik~~~---P--k~~ki~iiGHSiGaYm~Lqi 127 (301)
T KOG3975|consen 95 VDHKLAFIKEYV---P--KDRKIYIIGHSIGAYMVLQI 127 (301)
T ss_pred HHHHHHHHHHhC---C--CCCEEEEEecchhHHHHHHH
Confidence 777788888766 3 36789999999986544433
No 125
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=83.47 E-value=2.2 Score=36.63 Aligned_cols=46 Identities=24% Similarity=0.287 Sum_probs=35.7
Q ss_pred HhhCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceec
Q 011426 392 MIAGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHE 460 (486)
Q Consensus 392 LL~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHm 460 (486)
+-...++|++.+|..|.+++....+.+.++++. .-++..|.|+||+
T Consensus 100 ~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~-----------------------~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 LAKIRIPVLFIHGENDPLVPPEQVRRLYEALPG-----------------------PKELYIIPGAGHF 145 (145)
T ss_dssp HTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCS-----------------------SEEEEEETTS-TT
T ss_pred hhccCCcEEEEEECCCCcCCHHHHHHHHHHcCC-----------------------CcEEEEeCCCcCc
Confidence 334568999999999999999999998888761 2356889999996
No 126
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=83.25 E-value=3.5 Score=46.53 Aligned_cols=100 Identities=15% Similarity=0.164 Sum_probs=58.4
Q ss_pred CCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCC-ccc--------CCC--C
Q 011426 94 NKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFS-YTN--------RSS--D 162 (486)
Q Consensus 94 ~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfS-y~~--------~~~--~ 162 (486)
..|+|+++||=.|.... +-.+.+ .+.. .-..++-+|.| |.|-| ... ... .
T Consensus 448 g~P~VVllHG~~g~~~~-~~~lA~-----------~La~------~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-ALAFAG-----------TLAA------AGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHH-HHHHHH-----------HHHh------CCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 35899999998887765 222221 0110 12356777766 66665 220 001 0
Q ss_pred Cc--------cCCcHHHHHHHHHHHHHHH------H---hCCCCCCCceEEEccccccccHHHHHHH
Q 011426 163 LL--------DTGDGRTAKDSLQFLIRWI------D---RFPRYKGREVYLTGESYAGHYVPQLARE 212 (486)
Q Consensus 163 ~~--------~~~~~~~a~~~~~fL~~f~------~---~fp~~~~~~~yi~GESYgG~yvp~la~~ 212 (486)
|. ..+..+.+.|++......- . .+..+...++++.|||.||.....++..
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 10 1255677777776554432 1 1233556799999999999998888843
No 127
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=83.18 E-value=2 Score=44.35 Aligned_cols=61 Identities=21% Similarity=0.285 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC-CceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKG-REVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
.+|.|...+|..-.+++|.... .|+.+.|.|||| |...|+.+|.= -.+.||+=-+++.-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP--------~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAP--------WLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCc--------cceeEEEecCccccch
Confidence 5788999999999999999975 799999999998 55666666632 3366666666665554
No 128
>PRK04940 hypothetical protein; Provisional
Probab=83.06 E-value=2.2 Score=39.27 Aligned_cols=60 Identities=7% Similarity=0.028 Sum_probs=39.5
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcccc
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNYYD 241 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~~~ 241 (486)
...++.+.+.+.+.++... .. ..++.|+|.|-||.|+-.||.+. .++ .++.||.+.|...
T Consensus 38 ~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~-----------g~~-aVLiNPAv~P~~~ 97 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLC-----------GIR-QVIFNPNLFPEEN 97 (180)
T ss_pred CHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHH-----------CCC-EEEECCCCChHHH
Confidence 3444555555555443321 11 24789999999999999998764 244 5677999999654
No 129
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=82.76 E-value=9.7 Score=37.50 Aligned_cols=104 Identities=21% Similarity=0.312 Sum_probs=61.5
Q ss_pred CCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHH
Q 011426 93 LNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTA 172 (486)
Q Consensus 93 ~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a 172 (486)
....+|+=++|-||+-== + + +..+.-=...--+|=|--| ||..+....+.. .+.
T Consensus 33 s~~gTVv~~hGsPGSH~D-F---------k--------Yi~~~l~~~~iR~I~iN~P---Gf~~t~~~~~~~-~~n---- 86 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHND-F---------K--------YIRPPLDEAGIRFIGINYP---GFGFTPGYPDQQ-YTN---- 86 (297)
T ss_pred CCceeEEEecCCCCCccc-h---------h--------hhhhHHHHcCeEEEEeCCC---CCCCCCCCcccc-cCh----
Confidence 445689999999998531 1 0 0000000122346777889 554444333221 122
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 173 KDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 173 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
.+-..|.+.++++- ..+ ..+.+.|||-|+--+-.+|... .+.|+++.||.
T Consensus 87 ~er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~-----------~~~g~~lin~~ 136 (297)
T PF06342_consen 87 EERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH-----------PLHGLVLINPP 136 (297)
T ss_pred HHHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC-----------ccceEEEecCC
Confidence 33345556666543 233 5789999999998888877654 26799999974
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=82.70 E-value=1.9 Score=43.38 Aligned_cols=93 Identities=20% Similarity=0.224 Sum_probs=53.9
Q ss_pred CCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCc-----ccccceEEEeCCCCCCCCcccCCCCCcc
Q 011426 91 NPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSW-----NTEANLLFLETPAGVGFSYTNRSSDLLD 165 (486)
Q Consensus 91 ~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw-----~~~a~~l~iD~PvGtGfSy~~~~~~~~~ 165 (486)
+++++-.+|+.||-=+| .|+== . +..-...| ...+|++..--| |||+|.+..+.
T Consensus 133 ~a~~~RWiL~s~GNg~~--------~E~~~-~-------~~~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~s~---- 191 (365)
T PF05677_consen 133 EAKPQRWILVSNGNGEC--------YENRA-M-------LDYKDDWIQRFAKELGANVLVFNYP-GVGSSTGPPSR---- 191 (365)
T ss_pred CCCCCcEEEEEcCChHH--------hhhhh-h-------hccccHHHHHHHHHcCCcEEEECCC-ccccCCCCCCH----
Confidence 56778899999976333 23200 0 00111122 246899999988 99999765421
Q ss_pred CCcHHHHHHHHHHHHHHHHhCC-CCCCCceEEEccccccccHHH
Q 011426 166 TGDGRTAKDSLQFLIRWIDRFP-RYKGREVYLTGESYAGHYVPQ 208 (486)
Q Consensus 166 ~~~~~~a~~~~~fL~~f~~~fp-~~~~~~~yi~GESYgG~yvp~ 208 (486)
.+...+++..++ ++...+ .-+.+.+.+-|+|-||-....
T Consensus 192 ~dLv~~~~a~v~----yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 192 KDLVKDYQACVR----YLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred HHHHHHHHHHHH----HHHhcccCCChheEEEeeccccHHHHHH
Confidence 123334444444 443332 223478999999999976443
No 131
>PLN02571 triacylglycerol lipase
Probab=82.19 E-value=4.2 Score=42.31 Aligned_cols=68 Identities=9% Similarity=0.139 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCC----CC-cceeeEEEeeccccC
Q 011426 169 GRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKS----KH-PINLKGIMVGNAVTD 237 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~----~~-~inLkGi~IGng~~d 237 (486)
..+.++++..|+.+.+++|.. ..+++++|||.||-.+-..|..|....-.. .. .+++..+..|.|-+.
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 356678889999999988865 247999999999999988888887642110 11 256777788877654
No 132
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=81.18 E-value=17 Score=38.58 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=39.0
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHH
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMI 215 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 215 (486)
+.+|+-.|+.+||+..=.+|+.-.+.|++.+|-||.|..+.=+-....+
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe 195 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE 195 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch
Confidence 7889999999999998888887666699999999999766555444333
No 133
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=81.13 E-value=2.3 Score=40.02 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHH
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMI 215 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 215 (486)
-+-.|+..+.+.|++.+++ +|||+|+|||=|+..+-.|.+...+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhc
Confidence 3456788888889988764 8999999999999887777665544
No 134
>COG0400 Predicted esterase [General function prediction only]
Probab=81.12 E-value=2.5 Score=39.87 Aligned_cols=60 Identities=22% Similarity=0.307 Sum_probs=43.3
Q ss_pred CCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHH
Q 011426 395 GGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFK 474 (486)
Q Consensus 395 ~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~ 474 (486)
.+.+|++.+|..|.+||..-+++..+.|.=.|. +..+..+. .||.++.+.= +.++
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~--------------------~v~~~~~~-~GH~i~~e~~----~~~~ 199 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGA--------------------DVEVRWHE-GGHEIPPEEL----EAAR 199 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC--------------------CEEEEEec-CCCcCCHHHH----HHHH
Confidence 579999999999999999999888877742221 34445555 9999976544 4445
Q ss_pred HHHcC
Q 011426 475 SFLRG 479 (486)
Q Consensus 475 ~fl~~ 479 (486)
+|+.+
T Consensus 200 ~wl~~ 204 (207)
T COG0400 200 SWLAN 204 (207)
T ss_pred HHHHh
Confidence 56654
No 135
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=80.47 E-value=2.2 Score=39.50 Aligned_cols=76 Identities=22% Similarity=0.192 Sum_probs=54.3
Q ss_pred eEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCC
Q 011426 143 LLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKH 222 (486)
Q Consensus 143 ~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~ 222 (486)
.|-.+ =-|||-|-+.-+.+. ++.++|....++++ +++|+-. .+.+.|-|+|+..+-.+|.+..+.
T Consensus 63 tlRfN-fRgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e~------ 127 (210)
T COG2945 63 TLRFN-FRGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPEI------ 127 (210)
T ss_pred EEeec-ccccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhcccc------
Confidence 34444 349999988877763 77788888888887 4888643 469999999998888888777553
Q ss_pred cceeeEEEeeccccC
Q 011426 223 PINLKGIMVGNAVTD 237 (486)
Q Consensus 223 ~inLkGi~IGng~~d 237 (486)
.+.+.+.|.++
T Consensus 128 ----~~~is~~p~~~ 138 (210)
T COG2945 128 ----LVFISILPPIN 138 (210)
T ss_pred ----cceeeccCCCC
Confidence 34555555554
No 136
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=80.43 E-value=1.1 Score=41.74 Aligned_cols=74 Identities=14% Similarity=0.066 Sum_probs=54.1
Q ss_pred CCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEE
Q 011426 151 GVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIM 230 (486)
Q Consensus 151 GtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~ 230 (486)
-|||.+++... +.+++..++..+++--++.+|.- +.+-+.|||-|.|.+..+..++-+ ..+.|++
T Consensus 102 svgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~--------prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS--------PRIWGLI 166 (270)
T ss_pred EeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC--------chHHHHH
Confidence 46777765432 56788888888888777778743 359999999999988877777432 3378888
Q ss_pred eeccccCcc
Q 011426 231 VGNAVTDNY 239 (486)
Q Consensus 231 IGng~~d~~ 239 (486)
+-+|+-+-.
T Consensus 167 l~~GvY~l~ 175 (270)
T KOG4627|consen 167 LLCGVYDLR 175 (270)
T ss_pred HHhhHhhHH
Confidence 888876544
No 137
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=79.77 E-value=26 Score=34.74 Aligned_cols=93 Identities=11% Similarity=0.032 Sum_probs=59.8
Q ss_pred ccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHh
Q 011426 138 NTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHN 217 (486)
Q Consensus 138 ~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n 217 (486)
..++-+.=||.| |--..-..-..+|...+.++.|+++...|+.| .=+-++=+|+--|......+|..-.++
T Consensus 76 ~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-------~lk~vIg~GvGAGAyIL~rFAl~hp~r- 146 (326)
T KOG2931|consen 76 LEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-------GLKSVIGMGVGAGAYILARFALNHPER- 146 (326)
T ss_pred HhheEEEecCCC-ccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-------CcceEEEecccccHHHHHHHHhcChhh-
Confidence 445778888987 43332222222333347888999998888743 234688889988877777777655444
Q ss_pred cCCCCcceeeEEEeeccccCcccccccchhhhcc
Q 011426 218 SKSKHPINLKGIMVGNAVTDNYYDNLGTVTYWWS 251 (486)
Q Consensus 218 ~~~~~~inLkGi~IGng~~d~~~~~~~~~~~a~~ 251 (486)
+-|++++|..- ...++.+++++
T Consensus 147 --------V~GLvLIn~~~----~a~gwiew~~~ 168 (326)
T KOG2931|consen 147 --------VLGLVLINCDP----CAKGWIEWAYN 168 (326)
T ss_pred --------eeEEEEEecCC----CCchHHHHHHH
Confidence 88999998642 33566666653
No 138
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=79.61 E-value=3.4 Score=42.59 Aligned_cols=66 Identities=24% Similarity=0.332 Sum_probs=43.1
Q ss_pred ccceEEEe-------CCCCCCCCcccCCC-CCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHH
Q 011426 140 EANLLFLE-------TPAGVGFSYTNRSS-DLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQL 209 (486)
Q Consensus 140 ~a~~l~iD-------~PvGtGfSy~~~~~-~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~l 209 (486)
.|-|||+| +|.|.- ||.+... .| -+.+|+-.|+.+.|+ ++++...=+..|++.+|-||||+.+.-+
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy--LtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGY--LTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhcc--ccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHH
Confidence 46788887 577776 5543322 23 266777777766555 5555444456799999999999655443
No 139
>PRK10985 putative hydrolase; Provisional
Probab=78.70 E-value=6.1 Score=39.70 Aligned_cols=134 Identities=16% Similarity=0.097 Sum_probs=67.7
Q ss_pred EEecCCCCceEEEEEEEecCCCCCCCceEeeCCCCChhhhchh-hhcccCCeEEcCCCCceecCCCCcccccceEEEeCC
Q 011426 71 VPVNKVPGRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYG-ASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETP 149 (486)
Q Consensus 71 ~~v~~~~~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g-~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~P 149 (486)
++..+ |..+.+++.+....+.++|+||.++|.+|++...+. .+.+ .+.. .-.+++-+|.+
T Consensus 36 ~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~~------~G~~v~~~d~r 96 (324)
T PRK10985 36 LELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQK------RGWLGVVMHFR 96 (324)
T ss_pred EECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHHH------CCCEEEEEeCC
Confidence 55543 445544443332334578999999999998543110 0110 1111 12367778877
Q ss_pred CCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEE
Q 011426 150 AGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGI 229 (486)
Q Consensus 150 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi 229 (486)
|.|-|-......+ .... .+|+..+++..-++++ ..+++++|+|+||..+-..+.+-.+. ..++++
T Consensus 97 -G~g~~~~~~~~~~-~~~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~~-------~~~~~~ 161 (324)
T PRK10985 97 -GCSGEPNRLHRIY-HSGE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGDD-------LPLDAA 161 (324)
T ss_pred -CCCCCccCCcceE-CCCc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCCC-------CCccEE
Confidence 5442211111111 1122 3444443332223454 46899999999998655444432111 236666
Q ss_pred EeeccccCc
Q 011426 230 MVGNAVTDN 238 (486)
Q Consensus 230 ~IGng~~d~ 238 (486)
++.++-.+.
T Consensus 162 v~i~~p~~~ 170 (324)
T PRK10985 162 VIVSAPLML 170 (324)
T ss_pred EEEcCCCCH
Confidence 666654443
No 140
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=77.24 E-value=11 Score=35.97 Aligned_cols=42 Identities=21% Similarity=0.197 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCceEEEccccccccHHHHH
Q 011426 169 GRTAKDSLQFLIRWIDRF--PRYKGREVYLTGESYAGHYVPQLA 210 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvp~la 210 (486)
.+.++.+.+.++...+.+ ..-..+++.|+|||.||.-+-.+.
T Consensus 60 ~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 60 QRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSAL 103 (225)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHH
Confidence 345666666777666655 122367899999999996444333
No 141
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=75.62 E-value=0.78 Score=46.56 Aligned_cols=105 Identities=17% Similarity=0.225 Sum_probs=60.2
Q ss_pred CCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcc-cccceEEEeCCCCCCCCcccCCCCCccCCcHH
Q 011426 92 PLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWN-TEANLLFLETPAGVGFSYTNRSSDLLDTGDGR 170 (486)
Q Consensus 92 ~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~-~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~ 170 (486)
..++|++|.++|=-+..+.. .-+. .+..+-.... ...|||.||--.+..-.|... ..+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~-~~~~------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSE-SWIQ------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQA-----VANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TT-THHH------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH-----HHHHHH
T ss_pred CCCCCeEEEEcCcCCcccch-hHHH------------HHHHHHHhhccCCceEEEEcchhhccccccch-----hhhHHH
Confidence 45789999999865555110 0000 1111111111 357999999765554444221 124567
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHH
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMI 215 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 215 (486)
+++.+..||+...... .....+++|+|+|.|+|.+-.+++++..
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 7888888888777432 2224689999999999999988888866
No 142
>PLN02719 triacylglycerol lipase
Probab=73.90 E-value=9.5 Score=40.68 Aligned_cols=70 Identities=16% Similarity=0.172 Sum_probs=49.5
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCC--CCceEEEccccccccHHHHHHHHHHHhcC--CCC-cceeeEEEeeccccC
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYK--GREVYLTGESYAGHYVPQLAREIMIHNSK--SKH-PINLKGIMVGNAVTD 237 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~--~~~~yi~GESYgG~yvp~la~~i~~~n~~--~~~-~inLkGi~IGng~~d 237 (486)
...+.+++...|+...+++|.+. ...++|+|||.||-.+-..|..|.+..-. ... .+++.-+..|.|-+.
T Consensus 272 k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 272 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred chhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 34567888999999999888652 34699999999999999999888765211 011 145556666766543
No 143
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=73.36 E-value=7 Score=37.29 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
..+++..+|+. +|+-...+ ..|+|.|+||.-+-.++.+-.+. +.+++..+|.+++.
T Consensus 98 l~~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~---------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALRHPDL---------FGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHHSTTT---------ESEEEEESEESETT
T ss_pred hhccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHhCccc---------cccccccCcccccc
Confidence 33444444443 34433333 89999999999888888665444 99999999988776
No 144
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=72.70 E-value=8.3 Score=37.90 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccH
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYV 206 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 206 (486)
-.++++.+.+.+......-|+=..-++|+.|||-|..=.
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~ 123 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGG 123 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccch
Confidence 456888899999988888888766679999999986543
No 145
>PLN02753 triacylglycerol lipase
Probab=72.68 E-value=9.6 Score=40.76 Aligned_cols=71 Identities=15% Similarity=0.125 Sum_probs=50.4
Q ss_pred CcHHHHHHHHHHHHHHHHhCCC--CCCCceEEEccccccccHHHHHHHHHHHhcC--CC-CcceeeEEEeeccccC
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPR--YKGREVYLTGESYAGHYVPQLAREIMIHNSK--SK-HPINLKGIMVGNAVTD 237 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvp~la~~i~~~n~~--~~-~~inLkGi~IGng~~d 237 (486)
+...+.+++...|+...+++|. .....++|+|||.||-.+-..|..|.+..-. .. ..+++.-+..|.|-+.
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 4456788899999999988863 2345799999999999999998888764211 01 1255666777776553
No 146
>PRK13604 luxD acyl transferase; Provisional
Probab=72.52 E-value=7.1 Score=39.10 Aligned_cols=47 Identities=17% Similarity=0.211 Sum_probs=38.9
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccC
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLF 464 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~d 464 (486)
+.+||+.||+.|..||..+++...++++= .+-.+..+.||+|.....
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~s----------------------~~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIRS----------------------EQCKLYSLIGSSHDLGEN 248 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhcc----------------------CCcEEEEeCCCccccCcc
Confidence 48999999999999999999999888631 134678899999997643
No 147
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=71.13 E-value=15 Score=28.71 Aligned_cols=78 Identities=24% Similarity=0.201 Sum_probs=48.1
Q ss_pred ceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCccc
Q 011426 79 RALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTN 158 (486)
Q Consensus 79 ~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~ 158 (486)
.+||+..++.+. + .+.+|+.++|--..|.- |..+.+ .|.. +-..|+-+|+. |-|.|-..
T Consensus 2 ~~L~~~~w~p~~-~-~k~~v~i~HG~~eh~~r-y~~~a~-----------~L~~------~G~~V~~~D~r-GhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPEN-P-PKAVVVIVHGFGEHSGR-YAHLAE-----------FLAE------QGYAVFAYDHR-GHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCC-C-CCEEEEEeCCcHHHHHH-HHHHHH-----------HHHh------CCCEEEEECCC-cCCCCCCc
Confidence 457777665432 2 68999999988655554 444333 2322 22378899987 88888643
Q ss_pred CCCCCccCCcHHHHHHHHHHHH
Q 011426 159 RSSDLLDTGDGRTAKDSLQFLI 180 (486)
Q Consensus 159 ~~~~~~~~~~~~~a~~~~~fL~ 180 (486)
.. + ..+-++..+|+..|++
T Consensus 61 rg--~-~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 RG--H-IDSFDDYVDDLHQFIQ 79 (79)
T ss_pred cc--c-cCCHHHHHHHHHHHhC
Confidence 22 2 2356677777777653
No 148
>PRK11071 esterase YqiA; Provisional
Probab=70.55 E-value=9.2 Score=35.29 Aligned_cols=80 Identities=18% Similarity=0.271 Sum_probs=48.3
Q ss_pred CceEeeCCCCChhhhchh-hhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHH
Q 011426 96 PLVVWLNGGPGCSSVAYG-ASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKD 174 (486)
Q Consensus 96 P~~lwlnGGPG~ss~~~g-~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~ 174 (486)
|.||+++|-+|++..... .+.+ .+..+ ....+++.+|.| |+. ++.++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~-----------~l~~~----~~~~~v~~~dl~---g~~-------------~~~~~- 49 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKN-----------WLAQH----HPDIEMIVPQLP---PYP-------------ADAAE- 49 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHH-----------HHHHh----CCCCeEEeCCCC---CCH-------------HHHHH-
Confidence 679999999988875210 1111 01000 012357888888 431 12334
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHH
Q 011426 175 SLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREI 213 (486)
Q Consensus 175 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i 213 (486)
++.++.+... .++++|+|.|.||.++-.+|.+.
T Consensus 50 ---~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~~ 82 (190)
T PRK11071 50 ---LLESLVLEHG---GDPLGLVGSSLGGYYATWLSQCF 82 (190)
T ss_pred ---HHHHHHHHcC---CCCeEEEEECHHHHHHHHHHHHc
Confidence 4444454432 46899999999999998888653
No 149
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=70.26 E-value=9 Score=36.84 Aligned_cols=59 Identities=17% Similarity=0.148 Sum_probs=45.5
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
...|.++.|+.|.+|...-...|-+..+ +.+++-+ ...|||-+.++.+.....|.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~~f~l~~-fdGgHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------GDFTLRV-FDGGHFFLNQQREEVLARLEQ 231 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------CCceEEE-ecCcceehhhhHHHHHHHHHH
Confidence 4889999999999998886666554431 1345544 468999999999999988888
Q ss_pred HHc
Q 011426 476 FLR 478 (486)
Q Consensus 476 fl~ 478 (486)
.+.
T Consensus 232 ~l~ 234 (244)
T COG3208 232 HLA 234 (244)
T ss_pred Hhh
Confidence 875
No 150
>KOG3101 consensus Esterase D [General function prediction only]
Probab=70.00 E-value=16 Score=34.48 Aligned_cols=152 Identities=16% Similarity=0.161 Sum_probs=71.0
Q ss_pred eeEeeeEEecCC----CCceEEEEEEEecCCC--CCCCceEeeCCCCChhhhchhhh----------cccCCeEEcCCCC
Q 011426 65 QQFSGYVPVNKV----PGRALFYWLTEATHNP--LNKPLVVWLNGGPGCSSVAYGAS----------EEIGPFRINKTAS 128 (486)
Q Consensus 65 ~~~sGy~~v~~~----~~~~lfy~f~es~~~~--~~~P~~lwlnGGPG~ss~~~g~~----------~E~GP~~~~~~~~ 128 (486)
+.+-|+..+-.. .+-.|=|-.|--...| +.-|+++||.|= -|.- -+| .++|=..|.+|..
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~---~Nfi~Ksg~qq~As~hgl~vV~PDTS 83 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTH---ENFIEKSGFQQQASKHGLAVVAPDTS 83 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccc---hhhHhhhhHHHhHhhcCeEEECCCCC
Confidence 345555555331 1224544444333333 345999999753 3321 222 3455556666632
Q ss_pred ----ceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHH-hCCCCCCCceEEEcccccc
Q 011426 129 ----GLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWID-RFPRYKGREVYLTGESYAG 203 (486)
Q Consensus 129 ----~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~-~fp~~~~~~~yi~GESYgG 203 (486)
.+.-.+.|| |=-.|.||=-..+...+. ..-..-+.+.+-|-+.+. .+-.....+.-|+|||+||
T Consensus 84 PRG~~v~g~~esw---------DFG~GAGFYvnAt~epw~--~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGG 152 (283)
T KOG3101|consen 84 PRGVEVAGDDESW---------DFGQGAGFYVNATQEPWA--KHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGG 152 (283)
T ss_pred CCccccCCCcccc---------cccCCceeEEecccchHh--hhhhHHHHHHHHHHHHhccccccccchhcceeccccCC
Confidence 344455677 434566763322222111 111122222222222222 2222333458999999999
Q ss_pred ccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCccc
Q 011426 204 HYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNYY 240 (486)
Q Consensus 204 ~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~~ 240 (486)
|=+-.++.+=. -..|.+---.|..+|..
T Consensus 153 hGAl~~~Lkn~---------~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 153 HGALTIYLKNP---------SKYKSVSAFAPICNPIN 180 (283)
T ss_pred CceEEEEEcCc---------ccccceeccccccCccc
Confidence 86544442111 12455555556666543
No 151
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=69.89 E-value=17 Score=38.48 Aligned_cols=34 Identities=26% Similarity=0.281 Sum_probs=24.6
Q ss_pred HHHHHHHHHhCCCCCCCceEEEccccccccHHHHH
Q 011426 176 LQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLA 210 (486)
Q Consensus 176 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 210 (486)
++++++..+.|-.= ..++-|+|||-|++-+-.+.
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~Ll 198 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTLL 198 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHhh
Confidence 46777777777543 24699999999987766554
No 152
>PLN02310 triacylglycerol lipase
Probab=68.49 E-value=11 Score=39.10 Aligned_cols=64 Identities=16% Similarity=0.126 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCC-CCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 169 GRTAKDSLQFLIRWIDRFPRY-KGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
..+.+++.+.++...+.+++- ....+.|+|||.||-.+-..|..|...... +++.-+..|.|-+
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~v~vyTFGsPRV 249 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPD----LFVSVISFGAPRV 249 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcC----cceeEEEecCCCc
Confidence 345667777778777766531 234699999999999988877777553211 4455566666654
No 153
>PLN02324 triacylglycerol lipase
Probab=67.84 E-value=15 Score=38.28 Aligned_cols=48 Identities=13% Similarity=0.127 Sum_probs=38.9
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
...+.+++...|+.+.+++|... ..+.++|||.||-.+-..|..|.+.
T Consensus 192 k~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 192 TTSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred hhHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHh
Confidence 34577788888999999888532 3699999999999988888888764
No 154
>PLN02934 triacylglycerol lipase
Probab=67.74 E-value=14 Score=39.52 Aligned_cols=41 Identities=12% Similarity=0.160 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 173 KDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 173 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
.++...|+.+.+++|. .+++++|||-||-.+-..|..|...
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 3577788888888885 4799999999999988888776543
No 155
>PLN00413 triacylglycerol lipase
Probab=67.39 E-value=6.3 Score=41.60 Aligned_cols=39 Identities=21% Similarity=0.342 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHH
Q 011426 174 DSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMI 215 (486)
Q Consensus 174 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 215 (486)
++.+.|++.++.+| +.+++++|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p---~~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNP---TSKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCC---CCeEEEEecCHHHHHHHHHHHHHHh
Confidence 56677888888888 4579999999999998888877654
No 156
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=66.80 E-value=12 Score=37.27 Aligned_cols=71 Identities=14% Similarity=0.096 Sum_probs=41.1
Q ss_pred CcHHHHHHHHHHHHHHHHhCCC-CCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcccc
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPR-YKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNYYD 241 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~~~ 241 (486)
+.+++++++-.+++-+-..... +..+++.|+|||=|..=+-.... ..+.. ...-.++|+|+-.|+-|.+..
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~---~~~~~-~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLS---SPNPS-PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHH---H-TT----CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHh---ccCcc-ccccceEEEEEeCCCCChhHh
Confidence 6677788887777665555322 34568999999999766554443 33210 112569999999998887643
No 157
>PRK14567 triosephosphate isomerase; Provisional
Probab=65.90 E-value=16 Score=35.59 Aligned_cols=61 Identities=15% Similarity=0.312 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 169 GRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
.+.++++..++++++.++-+-....+-|. |||-.-|.=+..|.+.. ++.|+.||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~-------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP-------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC-------CCCEEEeehhhhcHH
Confidence 56788899999999876422111222232 89999999999998873 499999999988764
No 158
>PRK14566 triosephosphate isomerase; Provisional
Probab=65.84 E-value=15 Score=35.97 Aligned_cols=62 Identities=16% Similarity=0.407 Sum_probs=46.0
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
+.+.|+++..||++++.+........+=|. |||-.-|.-+..|.... ++.|+.||...+++.
T Consensus 187 t~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~-------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 187 TPEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP-------DVDGGLIGGASLNST 248 (260)
T ss_pred CHHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC-------CCCeEEechHhcCHH
Confidence 346688999999999875421111223333 99999999999998874 499999999888774
No 159
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=65.79 E-value=14 Score=35.32 Aligned_cols=51 Identities=18% Similarity=0.302 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecc
Q 011426 175 SLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNA 234 (486)
Q Consensus 175 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 234 (486)
-.++++...+.+++ +++++|||=||..+-+.|..+.+... =.++.+..-||
T Consensus 71 A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~-----~rI~~vy~fDg 121 (224)
T PF11187_consen 71 ALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQ-----DRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHh-----hheeEEEEeeC
Confidence 34667776676663 69999999999999999888655422 12555555554
No 160
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=65.71 E-value=12 Score=39.11 Aligned_cols=58 Identities=12% Similarity=-0.033 Sum_probs=44.6
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
..+||+.+|..|.+||....+.+.+... +..++.+.++ | ..++|+.++..+.+
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~~------------------------~~~l~~i~~~-~--~~e~~~~~~~~i~~ 407 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSSA------------------------DGKLLEIPFK-P--VYRNFDKALQEISD 407 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhCC------------------------CCeEEEccCC-C--ccCCHHHHHHHHHH
Confidence 4799999999999999999986654431 2345667776 3 34699999999999
Q ss_pred HHcCC
Q 011426 476 FLRGD 480 (486)
Q Consensus 476 fl~~~ 480 (486)
||..+
T Consensus 408 wL~~~ 412 (414)
T PRK05077 408 WLEDR 412 (414)
T ss_pred HHHHH
Confidence 99653
No 161
>PLN02847 triacylglycerol lipase
Probab=65.33 E-value=12 Score=40.66 Aligned_cols=61 Identities=16% Similarity=0.239 Sum_probs=39.0
Q ss_pred CcHHHHHHHHH----HHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecc
Q 011426 167 GDGRTAKDSLQ----FLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNA 234 (486)
Q Consensus 167 ~~~~~a~~~~~----fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 234 (486)
+--..|+.+.. .|++-+..+|.| ++.|+|||.||-.+..++..+.++.. ..++..+..|.|
T Consensus 225 Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~----fssi~CyAFgPp 289 (633)
T PLN02847 225 GMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE----FSSTTCVTFAPA 289 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC----CCCceEEEecCc
Confidence 44445554444 445556668855 69999999999988888765543221 145666666653
No 162
>PLN02408 phospholipase A1
Probab=65.24 E-value=10 Score=38.85 Aligned_cols=46 Identities=13% Similarity=0.114 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
.+.+++.+-|+.+.+++|... ..++|+|||.||-.+-..|..|.+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~-~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEP-LSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCC-ceEEEeccchHHHHHHHHHHHHHHh
Confidence 466778888888888888652 3699999999999998888888764
No 163
>PLN02802 triacylglycerol lipase
Probab=64.65 E-value=14 Score=39.30 Aligned_cols=63 Identities=11% Similarity=0.134 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 170 RTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
.+.+++.+-++.+++++|... ..++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~---~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA---APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC---CCceEEEEcCCCCc
Confidence 456778888888888877432 3699999999999998888888665321 12344555555543
No 164
>PLN02761 lipase class 3 family protein
Probab=62.77 E-value=19 Score=38.50 Aligned_cols=69 Identities=13% Similarity=0.085 Sum_probs=47.5
Q ss_pred cHHHHHHHHHHHHHHHHhCCCC-C--CCceEEEccccccccHHHHHHHHHHHhcC----CCCcceeeEEEeecccc
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRY-K--GREVYLTGESYAGHYVPQLAREIMIHNSK----SKHPINLKGIMVGNAVT 236 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~-~--~~~~yi~GESYgG~yvp~la~~i~~~n~~----~~~~inLkGi~IGng~~ 236 (486)
...+.+++...|+...+.+|.. + ...++++|||.||-.+-..|..|...+-. ....+++.-+..|.|=+
T Consensus 267 k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 267 SFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred chhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 3457788899999988888532 1 23599999999999998888888764321 01125566666666644
No 165
>PLN02162 triacylglycerol lipase
Probab=62.30 E-value=11 Score=39.90 Aligned_cols=41 Identities=24% Similarity=0.238 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 173 KDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 173 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
..+.+.|+..+.++| +.+++++|||.||-.+-..|..+...
T Consensus 262 ~~I~~~L~~lL~k~p---~~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 262 YTIRQMLRDKLARNK---NLKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHHHHHhCC---CceEEEEecChHHHHHHHHHHHHHHc
Confidence 345566777788888 45799999999999887777766543
No 166
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=62.23 E-value=18 Score=33.16 Aligned_cols=67 Identities=21% Similarity=0.146 Sum_probs=40.6
Q ss_pred cccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhC-CCCCCCceEEEccccccccHHHHHHH
Q 011426 139 TEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRF-PRYKGREVYLTGESYAGHYVPQLARE 212 (486)
Q Consensus 139 ~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvp~la~~ 212 (486)
+.|-|.|++-...-+......... --+..|.+|..|+..+=..+ | ...+-++|||||..-+-.-++.
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~~----~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASPG----YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCch----HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 778889985443322111111111 12456777777777765555 3 4479999999998766555544
No 167
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=61.51 E-value=29 Score=33.13 Aligned_cols=86 Identities=17% Similarity=0.155 Sum_probs=56.3
Q ss_pred ceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCC
Q 011426 142 NLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSK 221 (486)
Q Consensus 142 ~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~ 221 (486)
+...|+-|.+.+-=.+-....+ ..+..+-++.+.+.|..+.. ..+++.|+|.|-|+.-+-...+++.+....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~-~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~-- 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTY-DESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP-- 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCcc-chHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC--
Confidence 4566777764332111111112 12566777788888887665 478999999999999888888888774321
Q ss_pred CcceeeEEEeeccc
Q 011426 222 HPINLKGIMVGNAV 235 (486)
Q Consensus 222 ~~inLkGi~IGng~ 235 (486)
..=++.-+.+|||.
T Consensus 76 ~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 76 PPDDLSFVLIGNPR 89 (225)
T ss_pred CcCceEEEEecCCC
Confidence 11468899999984
No 168
>PF03283 PAE: Pectinacetylesterase
Probab=61.42 E-value=55 Score=33.66 Aligned_cols=132 Identities=20% Similarity=0.185 Sum_probs=70.8
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhc---hhhhcccCCeE-----EcCCC---CceecCCCCcccccceEEE
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVA---YGASEEIGPFR-----INKTA---SGLYLNKLSWNTEANLLFL 146 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~---~g~~~E~GP~~-----~~~~~---~~l~~n~~sw~~~a~~l~i 146 (486)
|..-.|++-+. .....+-+||.|.||=-|.+.. .-...+.|-.. +..+| .....||.=++ .|+|||
T Consensus 34 GS~~~yy~~~g-~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~v 110 (361)
T PF03283_consen 34 GSPPGYYFRPG-SGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFV 110 (361)
T ss_pred CCCCcEEEccC-CCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEE
Confidence 44444444443 2345678999999999998742 01223444221 22222 12345663222 578888
Q ss_pred eCCCCCCCCcccCCCCCccCC--cHHHHHHHH-HHHHHHHHh-CCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 147 ETPAGVGFSYTNRSSDLLDTG--DGRTAKDSL-QFLIRWIDR-FPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 147 D~PvGtGfSy~~~~~~~~~~~--~~~~a~~~~-~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
|--+|-+++-+.......+ ..-....++ ++|.....+ +++ ...+.|+|.|-||.=+..-+.++.+.
T Consensus 111 --pYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~ 180 (361)
T PF03283_consen 111 --PYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDR 180 (361)
T ss_pred --EecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHH
Confidence 4566666643222110000 111223333 444444444 443 34799999999999888888887775
No 169
>PLN03037 lipase class 3 family protein; Provisional
Probab=60.86 E-value=19 Score=38.56 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCceEEEccccccccHHHHHHHHHHH
Q 011426 170 RTAKDSLQFLIRWIDRFPRY-KGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
.+.+++.+-++...+.+++. ....++|+|||.||-.+-..|..|...
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 34466777778777777642 234699999999999988888777664
No 170
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=60.48 E-value=15 Score=35.61 Aligned_cols=61 Identities=21% Similarity=0.265 Sum_probs=45.1
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHHHHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKS 475 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~mi~~ 475 (486)
..+|||+||..|-++|+.-..+..+..+= ......|+||||--..--| .-.+-+++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k~-----------------------~~epl~v~g~gH~~~~~~~-~yi~~l~~ 247 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCKE-----------------------KVEPLWVKGAGHNDIELYP-EYIEHLRR 247 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhccc-----------------------cCCCcEEecCCCcccccCH-HHHHHHHH
Confidence 36999999999999999877666555421 1234678999999887776 45677788
Q ss_pred HHcCC
Q 011426 476 FLRGD 480 (486)
Q Consensus 476 fl~~~ 480 (486)
|+...
T Consensus 248 f~~~~ 252 (258)
T KOG1552|consen 248 FISSV 252 (258)
T ss_pred HHHHh
Confidence 87643
No 171
>COG4425 Predicted membrane protein [Function unknown]
Probab=60.24 E-value=20 Score=37.39 Aligned_cols=37 Identities=19% Similarity=0.398 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccc
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGH 204 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 204 (486)
-.++|+.+.++.-.....-|+=+..++|+.|||-|.+
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 4578999999999999999988777899999999864
No 172
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=60.21 E-value=13 Score=35.08 Aligned_cols=50 Identities=12% Similarity=0.098 Sum_probs=38.5
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHh
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHN 217 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n 217 (486)
+.+..++.+.+.|.+..+..+.- .+++.++|||.||.++-.....+.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 45567888888888887766543 368999999999999987777776653
No 173
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=57.56 E-value=14 Score=34.85 Aligned_cols=46 Identities=15% Similarity=0.294 Sum_probs=36.0
Q ss_pred HHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 180 IRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 180 ~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
.+|++.+|+-..+++-|.|-|.||-.+-.+|.++. .++.++..||.
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~----------~i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP----------QISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS----------SEEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC----------CccEEEEeCCc
Confidence 35778999998889999999999999999998774 28888888774
No 174
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=57.56 E-value=1e+02 Score=30.19 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 175 SLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 175 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
+.+-|+=|.+.-=+....+--|+||||||-.+-. .|+++.+. +.-+++++|.+
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~---aLL~~p~~------F~~y~~~SPSl 172 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLF---ALLTYPDC------FGRYGLISPSL 172 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHH---HHhcCcch------hceeeeecchh
Confidence 3333444555422233445899999999987654 34444222 56666666643
No 175
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=57.25 E-value=43 Score=33.81 Aligned_cols=142 Identities=16% Similarity=0.150 Sum_probs=65.9
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhch--hhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCC
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAY--GASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFS 155 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~--g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfS 155 (486)
|..++=|++.-+......|.||.++|..|.+.... -.+...|=..+..|-.... ....+..-...+..-|+-
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg------~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQG------GRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTS------SSS-B-SSBSSS-SSSST
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCC------CCCCCccccCCCCCccHH
Confidence 56677777655445678899999999988865311 1233444333322211000 000010000111112221
Q ss_pred cccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 156 YTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 156 y~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
.-...+.....=-.....|.+.++ .|+...|+...+.+.++|+|-||...-.+|. +.++ +++++...|+
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~r---------v~~~~~~vP~ 208 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPR---------VKAAAADVPF 208 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSST----------SEEEEESES
T ss_pred hcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCcc---------ccEEEecCCC
Confidence 110000000000012233444433 3566789998889999999999988776665 4332 7777777665
Q ss_pred c
Q 011426 236 T 236 (486)
Q Consensus 236 ~ 236 (486)
+
T Consensus 209 l 209 (320)
T PF05448_consen 209 L 209 (320)
T ss_dssp S
T ss_pred c
Confidence 4
No 176
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=56.91 E-value=22 Score=36.13 Aligned_cols=57 Identities=21% Similarity=0.292 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecc
Q 011426 173 KDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNA 234 (486)
Q Consensus 173 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 234 (486)
..+.+-++.....+| +..++++|||-||-++...|..|...... ....++=+--|-|
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~--~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK--TSSPVKVYTFGQP 211 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC--CCCceEEEEecCC
Confidence 344455555566777 55799999999999999999999987532 1134444444444
No 177
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=55.88 E-value=8.1 Score=36.44 Aligned_cols=48 Identities=21% Similarity=0.259 Sum_probs=28.1
Q ss_pred CCeEEEEecCCCCCCCchhHH-HHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceecc
Q 011426 396 GLRVWVFSGDVDSVVPVTATR-YSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEV 461 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~-~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmv 461 (486)
+-+||+.+|..|.+-|..-.. ..++.|+=.+.. .+++.+...+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~------------------~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFP------------------HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC------------------CcceEEEcCCCCcee
Confidence 589999999999999877644 444566422211 157788889999996
No 178
>PRK07868 acyl-CoA synthetase; Validated
Probab=55.77 E-value=29 Score=40.82 Aligned_cols=39 Identities=26% Similarity=0.238 Sum_probs=28.3
Q ss_pred CceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 192 REVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 192 ~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
.+++++|+|.||..+-.+|..-.+ -.++++++.+.-+|.
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~--------~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRS--------KDIASIVTFGSPVDT 179 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCC--------CccceEEEEeccccc
Confidence 579999999999998877764111 127888777766654
No 179
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=54.23 E-value=28 Score=33.45 Aligned_cols=65 Identities=22% Similarity=0.266 Sum_probs=38.6
Q ss_pred cceEEEeCCCCCCCCcccCCCCCccCCc-HHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHH
Q 011426 141 ANLLFLETPAGVGFSYTNRSSDLLDTGD-GRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLA 210 (486)
Q Consensus 141 a~~l~iD~PvGtGfSy~~~~~~~~~~~~-~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 210 (486)
+.||-.|-- |+|=|.....+... ..- +=+-.|+-..|..-=+.-| ..|.|.+||||||+-.=-++
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~-~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQ-WRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred ceEEEEecc-cccCCCccccccCc-cchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccc
Confidence 477888855 88887755444221 111 1233445444443333345 67999999999998654444
No 180
>COG0627 Predicted esterase [General function prediction only]
Probab=54.18 E-value=49 Score=33.36 Aligned_cols=130 Identities=18% Similarity=0.168 Sum_probs=69.8
Q ss_pred CCCceEeeCCCCChhhhchhhhcccCCeEEcCCCC--ceecC-CCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHH
Q 011426 94 NKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTAS--GLYLN-KLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGR 170 (486)
Q Consensus 94 ~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~--~l~~n-~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~ 170 (486)
.+--|+|+.+|..|..- .+.+.++.+-..+.. .+.-+ -.-+....++--|+ |+|.|.|+-.+-..-. ....
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~-~~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPP-WASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCc-cccC-
Confidence 44456666677887731 122333333222211 11112 23344455555566 7999988743322100 0110
Q ss_pred HHHHHHHHHH-----HHHHhCCCCCC-CceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 171 TAKDSLQFLI-----RWIDRFPRYKG-REVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 171 ~a~~~~~fL~-----~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
..+.+.||. .|.+.||.-.+ ..-.|+|+|.||+=+-.+|.+-.++ ++.++=-+|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~---------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR---------FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch---------hceecccccccccc
Confidence 123333332 45556664321 2568999999999988888766544 67777777777776
No 181
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=53.41 E-value=29 Score=31.81 Aligned_cols=80 Identities=16% Similarity=0.241 Sum_probs=50.7
Q ss_pred ceEEEeCCCCCCC-CcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHH--HHHHhc
Q 011426 142 NLLFLETPAGVGF-SYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLARE--IMIHNS 218 (486)
Q Consensus 142 ~~l~iD~PvGtGf-Sy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~--i~~~n~ 218 (486)
++--|+-|+..+. +|. .+..+.++++...|+.+..+-| +.++.|+|-|=|+.-+-.++.. +...-
T Consensus 41 ~~~~V~YpA~~~~~~y~--------~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~~- 108 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYG--------DSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPDV- 108 (179)
T ss_dssp EEEE--S---SCGGSCH--------HHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHHH-
T ss_pred EEEecCCCCCCCccccc--------ccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChhh-
Confidence 4444667777665 332 2566778888999999999999 6799999999998887777665 11000
Q ss_pred CCCCcceeeE-EEeeccccC
Q 011426 219 KSKHPINLKG-IMVGNAVTD 237 (486)
Q Consensus 219 ~~~~~inLkG-i~IGng~~d 237 (486)
.=++.+ +.+|||...
T Consensus 109 ----~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 109 ----ADRIAAVVLFGDPRRG 124 (179)
T ss_dssp ----HHHEEEEEEES-TTTB
T ss_pred ----hhhEEEEEEecCCccc
Confidence 023666 577887654
No 182
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=52.59 E-value=15 Score=34.46 Aligned_cols=106 Identities=19% Similarity=0.144 Sum_probs=63.3
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
|..|.|.-+-+ -.--||.+-|--||+--++ +|-..+ .++ -.+ ..+|-+|+| |-|-|..
T Consensus 30 g~ql~y~~~G~-----G~~~iLlipGalGs~~tDf------~pql~~-------l~k--~l~-~TivawDPp-GYG~SrP 87 (277)
T KOG2984|consen 30 GTQLGYCKYGH-----GPNYILLIPGALGSYKTDF------PPQLLS-------LFK--PLQ-VTIVAWDPP-GYGTSRP 87 (277)
T ss_pred CceeeeeecCC-----CCceeEecccccccccccC------CHHHHh-------cCC--CCc-eEEEEECCC-CCCCCCC
Confidence 66788773221 2345788889999988764 221111 111 111 689999977 5555543
Q ss_pred cCCCCCc---cCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 158 NRSSDLL---DTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 158 ~~~~~~~---~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
.. .++. ...|.+.|-|+.++|+ -.+|-|.|-|=||.-+--+|.+-.+.
T Consensus 88 P~-Rkf~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak~~e~ 138 (277)
T KOG2984|consen 88 PE-RKFEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAKGKEK 138 (277)
T ss_pred Cc-ccchHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeeccChhh
Confidence 22 1211 1135566666666663 35899999999998877666655443
No 183
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=51.83 E-value=21 Score=39.99 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=55.7
Q ss_pred ceEeeCCCCChh-------hhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcH
Q 011426 97 LVVWLNGGPGCS-------SVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDG 169 (486)
Q Consensus 97 ~~lwlnGGPG~s-------s~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~ 169 (486)
-||++-|--|+- |.. .+....||++=.. -.+||++. +-.-+| ..=-||--. -....
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~a-~n~y~~~~~e~t~----~~d~~~~~----DFFaVD--FnEe~tAm~------G~~l~ 153 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASVA-QNAYQGGPFEKTE----DRDNPFSF----DFFAVD--FNEEFTAMH------GHILL 153 (973)
T ss_pred eEEEecCCCCchHHHHHHHHHH-hhhhcCCchhhhh----cccCcccc----ceEEEc--ccchhhhhc------cHhHH
Confidence 367787776652 332 5566789988332 33577776 222233 111222111 11456
Q ss_pred HHHHHHHHHHHHHHH---hCCCCC---CCceEEEccccccccHHHHH
Q 011426 170 RTAKDSLQFLIRWID---RFPRYK---GREVYLTGESYAGHYVPQLA 210 (486)
Q Consensus 170 ~~a~~~~~fL~~f~~---~fp~~~---~~~~yi~GESYgG~yvp~la 210 (486)
+.++.+.++|+.-+. .-++|+ .+.+.|+||||||..+-+.+
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~ 200 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATL 200 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHH
Confidence 678877777765544 445565 44599999999997654443
No 184
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=50.31 E-value=26 Score=34.24 Aligned_cols=64 Identities=14% Similarity=0.312 Sum_probs=39.5
Q ss_pred CcHHHHHHHHHHHHHHHH-hC-----CCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 167 GDGRTAKDSLQFLIRWID-RF-----PRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~-~f-----p~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
.+.+.+.++.++|.+=++ .. |.+ .++.|+|||=||+-+-.++....+. ...+++++++..+|+-
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~~~----~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNASS----SLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhccc----ccccceeEEEEecccc
Confidence 344566666666555221 12 233 2599999999999655555433221 1227899999999875
No 185
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=47.17 E-value=11 Score=34.81 Aligned_cols=16 Identities=44% Similarity=1.066 Sum_probs=13.8
Q ss_pred CCCCceEeeCCCCChh
Q 011426 93 LNKPLVVWLNGGPGCS 108 (486)
Q Consensus 93 ~~~P~~lwlnGGPG~s 108 (486)
.+.|-|+|+=|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 4678999999999985
No 186
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=46.87 E-value=40 Score=32.18 Aligned_cols=61 Identities=25% Similarity=0.295 Sum_probs=46.4
Q ss_pred CeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChH---HHHHHH
Q 011426 397 LRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPR---AALQLF 473 (486)
Q Consensus 397 irVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~---~a~~mi 473 (486)
.++|+.+|..|.++|..-.+.......= .......+.+++|....+.+. .++.-+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~----------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 290 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARE----------------------RPKKLLFVPGGGHIDLYDNPPAVEQALDKL 290 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhcc----------------------CCceEEEecCCccccccCccHHHHHHHHHH
Confidence 8999999999999998877776655421 034667788999999986665 577777
Q ss_pred HHHHcC
Q 011426 474 KSFLRG 479 (486)
Q Consensus 474 ~~fl~~ 479 (486)
.+|+..
T Consensus 291 ~~f~~~ 296 (299)
T COG1073 291 AEFLER 296 (299)
T ss_pred HHHHHH
Confidence 777754
No 187
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=46.26 E-value=25 Score=31.92 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=26.5
Q ss_pred CCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecccc
Q 011426 191 GREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVT 236 (486)
Q Consensus 191 ~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 236 (486)
..+.+|+|||.|+.-+-..+. .+. ..+++|+++.+|+-
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~~------~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQS------QKKVAGALLVAPFD 91 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HTC------CSSEEEEEEES--S
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hcc------cccccEEEEEcCCC
Confidence 457999999999866655554 222 15699999999983
No 188
>PLN02429 triosephosphate isomerase
Probab=46.15 E-value=46 Score=33.43 Aligned_cols=61 Identities=15% Similarity=0.267 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 169 GRTAKDSLQFLIRWIDR-FPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
.+.++.+..++++|+.. +.+-....+-|. |||-.-|.-+..|... -++.|+.||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~-------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE-------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC-------CCCCEEEeecceecHH
Confidence 45688889999999864 332212233333 8999999999999876 4599999999988764
No 189
>PLN02442 S-formylglutathione hydrolase
Probab=45.61 E-value=41 Score=33.09 Aligned_cols=49 Identities=14% Similarity=0.102 Sum_probs=36.1
Q ss_pred hCCCeEEEEecCCCCCCCch-hHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccc
Q 011426 394 AGGLRVWVFSGDVDSVVPVT-ATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVP 462 (486)
Q Consensus 394 ~~girVLIy~Gd~D~i~~~~-Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP 462 (486)
..+.+||+.+|+.|.+|+.. .++.+.+.++=. | .+.++..+.|++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~---------------g-----~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKEA---------------G-----APVTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHHc---------------C-----CCeEEEEeCCCCccHH
Confidence 34689999999999999974 467766665311 1 1467888999999765
No 190
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=45.56 E-value=23 Score=32.37 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=28.7
Q ss_pred CCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 191 GREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 191 ~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
.+|.||++||.|+.-+...+.++..+ ++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~---------V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQ---------VAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhc---------cceEEEecCC
Confidence 46899999999987776666666553 8999998874
No 191
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=45.32 E-value=15 Score=38.08 Aligned_cols=41 Identities=15% Similarity=0.084 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHH
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMI 215 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 215 (486)
.+..+-..|+.-++.. ++++.|+|||+||.++-.+-....+
T Consensus 102 ~~~~lk~~ie~~~~~~----~~kv~li~HSmGgl~~~~fl~~~~~ 142 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKKN----GKKVVLIAHSMGGLVARYFLQWMPQ 142 (389)
T ss_pred HHHHHHHHHHHHHHhc----CCcEEEEEeCCCchHHHHHHHhccc
Confidence 3444445555444322 6799999999999998877776643
No 192
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.99 E-value=31 Score=35.21 Aligned_cols=120 Identities=18% Similarity=0.328 Sum_probs=67.3
Q ss_pred CCCCceEeeCCCCChhhhchhhhcccCCeEEc----CCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCc
Q 011426 93 LNKPLVVWLNGGPGCSSVAYGASEEIGPFRIN----KTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGD 168 (486)
Q Consensus 93 ~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~----~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~ 168 (486)
..+-++++++| |.+=+|=+++|.- ..+...+.=-+||-..++++ ||-|.. .+.
T Consensus 114 ~~k~vlvFvHG--------fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~--------~Yn~Dr-------eS~ 170 (377)
T COG4782 114 SAKTVLVFVHG--------FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLL--------GYNYDR-------EST 170 (377)
T ss_pred CCCeEEEEEcc--------cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeee--------ecccch-------hhh
Confidence 56788999986 5666777777632 22222222234454444421 333311 123
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 169 GRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
+....++-.+|+..-+.-| -+++||..||+|...+-...++|.-++.. ..+..++=+++-.|-+|-.
T Consensus 171 ~~Sr~aLe~~lr~La~~~~---~~~I~ilAHSMGtwl~~e~LrQLai~~~~-~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 171 NYSRPALERLLRYLATDKP---VKRIYLLAHSMGTWLLMEALRQLAIRADR-PLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred hhhHHHHHHHHHHHHhCCC---CceEEEEEecchHHHHHHHHHHHhccCCc-chhhhhhheEeeCCCCChh
Confidence 3344444455554444333 45799999999988777777777655432 0124567777777666543
No 193
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=42.87 E-value=31 Score=34.81 Aligned_cols=121 Identities=25% Similarity=0.291 Sum_probs=68.1
Q ss_pred CceEEEEEEEecCCCCCCCceEeeCCCCChhhhc-----hhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCC
Q 011426 78 GRALFYWLTEATHNPLNKPLVVWLNGGPGCSSVA-----YGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGV 152 (486)
Q Consensus 78 ~~~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~-----~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGt 152 (486)
|--.+.|.-. ......|++|-++|==|.|.-- ...+.+-| ..++-++-- |-
T Consensus 60 ~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg---------------------~~~Vv~~~R-gc 115 (345)
T COG0429 60 GFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG---------------------WLVVVFHFR-GC 115 (345)
T ss_pred CEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC---------------------CeEEEEecc-cc
Confidence 4456777431 1234569999999988887521 12333333 245556643 44
Q ss_pred CCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEee
Q 011426 153 GFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVG 232 (486)
Q Consensus 153 GfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IG 232 (486)
|.+--. .......++. +|+..|+...-.++| .+|+|.+|-|.||. .+|.++.++..+ ...-.++++-
T Consensus 116 s~~~n~-~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d---~~~~aa~~vs 182 (345)
T COG0429 116 SGEANT-SPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD---LPLDAAVAVS 182 (345)
T ss_pred cCCccc-Ccceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC---cccceeeeee
Confidence 433221 2212122333 444444444445677 78999999999984 466777666332 2345666666
Q ss_pred ccc
Q 011426 233 NAV 235 (486)
Q Consensus 233 ng~ 235 (486)
+|+
T Consensus 183 ~P~ 185 (345)
T COG0429 183 APF 185 (345)
T ss_pred CHH
Confidence 664
No 194
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=42.38 E-value=61 Score=30.85 Aligned_cols=58 Identities=21% Similarity=0.263 Sum_probs=41.4
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChH--HHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPR--AALQLF 473 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~--~a~~mi 473 (486)
.++.|-.-|+.|.+++..-++...+.-. +- .+....+||+||.-.|. ...+.|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~------------------------~a-~vl~HpggH~VP~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK------------------------DA-TVLEHPGGHIVPNKAKYKEKIADFI 217 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC------------------------CC-eEEecCCCccCCCchHHHHHHHHHH
Confidence 4778889999999999998877776632 11 45678899999987753 333555
Q ss_pred HHHHc
Q 011426 474 KSFLR 478 (486)
Q Consensus 474 ~~fl~ 478 (486)
+.++.
T Consensus 218 ~~~~~ 222 (230)
T KOG2551|consen 218 QSFLQ 222 (230)
T ss_pred HHHHH
Confidence 55543
No 195
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=42.27 E-value=35 Score=31.01 Aligned_cols=42 Identities=21% Similarity=0.280 Sum_probs=33.7
Q ss_pred CeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceecccc
Q 011426 397 LRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPL 463 (486)
Q Consensus 397 irVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~ 463 (486)
++.+++..+.|..||+.-++.+-++++ ..++.+.++||+-..
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~-------------------------a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG-------------------------AELIILGGGGHFNAA 156 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT--------------------------EEEEETS-TTSSGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC-------------------------CCeEECCCCCCcccc
Confidence 555999999999999999999988874 467889999999764
No 196
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=42.05 E-value=1.5e+02 Score=32.10 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=24.3
Q ss_pred HHHHHHHHHhCCCCCCCceEEEccccccccHHHHH
Q 011426 176 LQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLA 210 (486)
Q Consensus 176 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 210 (486)
++++++....|-. ..+++-|+|||.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 4666666666652 235799999999998875544
No 197
>PLN02561 triosephosphate isomerase
Probab=41.20 E-value=63 Score=31.45 Aligned_cols=60 Identities=17% Similarity=0.328 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 169 GRTAKDSLQFLIRWIDR-FPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
.+.++++..++++++.+ |..-....+-|. |||---|.=+..+... .++.|+.||.+.+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~-------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ-------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC-------CCCCeEEEehHhhHH
Confidence 45688888999988864 432222233333 8999999999999876 459999999999886
No 198
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=39.88 E-value=66 Score=32.71 Aligned_cols=54 Identities=20% Similarity=0.309 Sum_probs=39.1
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecc
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNA 234 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 234 (486)
++..+++.+.+|-.+=+ .|+..++.|.|-|-||.-+...|.-. -++|++++-.-
T Consensus 290 n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~Y----------PdVkavvLDAt 343 (517)
T KOG1553|consen 290 NTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASNY----------PDVKAVVLDAT 343 (517)
T ss_pred cchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhcC----------CCceEEEeecc
Confidence 66667776666655433 45578999999999999888887533 45898887543
No 199
>PRK07868 acyl-CoA synthetase; Validated
Probab=39.74 E-value=44 Score=39.24 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=45.9
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEE-EEEcCceecccc---CChHHHHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTF-ATVRGAGHEVPL---FKPRAALQ 471 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf-~~V~gAGHmvP~---dqP~~a~~ 471 (486)
..++|+..|..|-++|....+.+.+.+. +..+ ..+.++|||.+. .-|+....
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~wp 352 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP------------------------NAEVYESLIRAGHFGLVVGSRAAQQTWP 352 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEEeCCCCCEeeeechhhhhhhCh
Confidence 4799999999999999999888876653 2233 356799999654 55666678
Q ss_pred HHHHHHcC
Q 011426 472 LFKSFLRG 479 (486)
Q Consensus 472 mi~~fl~~ 479 (486)
.+.+||..
T Consensus 353 ~i~~wl~~ 360 (994)
T PRK07868 353 TVADWVKW 360 (994)
T ss_pred HHHHHHHH
Confidence 88999974
No 200
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=38.83 E-value=87 Score=30.26 Aligned_cols=60 Identities=20% Similarity=0.424 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 169 GRTAKDSLQFLIRWIDR-FPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
.+.+++...+|++++.. +.+ ....+-|. |||---|.=+..+.+.. ++.|+.||.+.+++.
T Consensus 175 ~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~-------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 175 PEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP-------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC-------CCCEEEeehHhhCHH
Confidence 34678888999998864 433 22333333 99999999999988763 489999999988753
No 201
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=38.71 E-value=62 Score=31.23 Aligned_cols=67 Identities=21% Similarity=0.207 Sum_probs=45.4
Q ss_pred ccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHh
Q 011426 140 EANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHN 217 (486)
Q Consensus 140 ~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n 217 (486)
...++=|+-| |-|--+.. . . .++.++.|+.+...|+- -+..+|+-++|||+||+.+=.+|.++.+..
T Consensus 33 ~iel~avqlP-GR~~r~~e--p-~-~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~g 99 (244)
T COG3208 33 DIELLAVQLP-GRGDRFGE--P-L-LTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERAG 99 (244)
T ss_pred hhheeeecCC-CcccccCC--c-c-cccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHcC
Confidence 3467889988 44422221 1 1 23555666666555542 344789999999999999999999987763
No 202
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=38.43 E-value=91 Score=30.28 Aligned_cols=60 Identities=22% Similarity=0.354 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 169 GRTAKDSLQFLIRWIDR-FPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
.+.++++..|+++++.. +. -....+-|. |||---|.=+..+... -++.|+.||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~-------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ-------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC-------CCCCEEEEeeeeechH
Confidence 45688889999998863 33 112233333 9999999999999876 4599999999988764
No 203
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=36.73 E-value=58 Score=35.64 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=28.4
Q ss_pred CCceEEEccccccccHHHHHHHHHHHhc---C-C--------CCcceeeEEEeecc
Q 011426 191 GREVYLTGESYAGHYVPQLAREIMIHNS---K-S--------KHPINLKGIMVGNA 234 (486)
Q Consensus 191 ~~~~yi~GESYgG~yvp~la~~i~~~n~---~-~--------~~~inLkGi~IGng 234 (486)
++++.|+|||+||.++-.+-..+-.... . + +..|++.|-.+|.+
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~ 267 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVP 267 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcH
Confidence 5799999999999888776654210000 0 0 11278888777766
No 204
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=35.37 E-value=30 Score=23.83 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=24.3
Q ss_pred ccccCcccccccchhhhcccccCCHHHHHHHHH
Q 011426 233 NAVTDNYYDNLGTVTYWWSHAMISDKTYQQLIN 265 (486)
Q Consensus 233 ng~~d~~~~~~~~~~~a~~~glI~~~~~~~~~~ 265 (486)
.|.+||..-..-..+-|...|+|+.+++..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 367788876555567788999999998877654
No 205
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=34.53 E-value=45 Score=30.90 Aligned_cols=40 Identities=23% Similarity=0.618 Sum_probs=23.3
Q ss_pred ceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHh
Q 011426 142 NLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDR 185 (486)
Q Consensus 142 ~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~ 185 (486)
++|+.|+|-++|..|..... .++....++..+++..++..
T Consensus 2 dliitDPPY~~~~~~~~~~~----~~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYFD----YGDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS-----C----SCHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhhh----ccCCCCHHHHHHHHHHHHHH
Confidence 78999999999998722211 24445567777777777764
No 206
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=33.93 E-value=94 Score=31.23 Aligned_cols=90 Identities=19% Similarity=0.101 Sum_probs=54.3
Q ss_pred ecCCCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCC
Q 011426 88 ATHNPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTG 167 (486)
Q Consensus 88 s~~~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~ 167 (486)
+..+....|-++.++|==|+--.+ .-+ .. .|...-. +.+.-||.- --|.|-....- +
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw-~sv--------~k---~Ls~~l~-----~~v~~vd~R-nHG~Sp~~~~h-----~ 101 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENW-RSV--------AK---NLSRKLG-----RDVYAVDVR-NHGSSPKITVH-----N 101 (315)
T ss_pred cccccCCCCceEEecccccCCCCH-HHH--------HH---Hhccccc-----CceEEEecc-cCCCCcccccc-----C
Confidence 334677889999999765543221 110 00 0111101 167777854 67877543322 4
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEcccccc
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAG 203 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG 203 (486)
-+..|+|+..||...-. .+...+..|.|||.||
T Consensus 102 ~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 102 YEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 56788888888876543 2446689999999999
No 207
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=33.91 E-value=1e+02 Score=29.96 Aligned_cols=61 Identities=16% Similarity=0.083 Sum_probs=34.6
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeecc
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNA 234 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 234 (486)
+..+.|+-+...|+..-++ |.=+.+-++|||+||.-+ ..++.+.... .....|+-++...|
T Consensus 81 ~~~~qa~wl~~vl~~L~~~---Y~~~~~N~VGHSmGg~~~---~~yl~~~~~~-~~~P~l~K~V~Ia~ 141 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKK---YHFKKFNLVGHSMGGLSW---TYYLENYGND-KNLPKLNKLVTIAG 141 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHC---C--SEEEEEEETHHHHHH---HHHHHHCTTG-TTS-EEEEEEEES-
T ss_pred CHHHHHHHHHHHHHHHHHh---cCCCEEeEEEECccHHHH---HHHHHHhccC-CCCcccceEEEecc
Confidence 4456777777777766553 445689999999999654 3444443221 11125555554443
No 208
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=32.93 E-value=54 Score=29.63 Aligned_cols=66 Identities=21% Similarity=0.255 Sum_probs=44.2
Q ss_pred CCCCceEeeCCCCChhhhchhhhcccC----CeEEcCCCCceecCC--CCcccccceEEEeCCCCCCCCc-ccC
Q 011426 93 LNKPLVVWLNGGPGCSSVAYGASEEIG----PFRINKTASGLYLNK--LSWNTEANLLFLETPAGVGFSY-TNR 159 (486)
Q Consensus 93 ~~~P~~lwlnGGPG~ss~~~g~~~E~G----P~~~~~~~~~l~~n~--~sw~~~a~~l~iD~PvGtGfSy-~~~ 159 (486)
+..+|=|.+.|| |||++.|++-.+.- -..+..++-++.-.+ ..+.+-+.|=|+|...|.||-. .++
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f~~NP 148 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNP 148 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEEecCC
Confidence 346788999999 99997655544332 244555554444444 3456677888999999999987 443
No 209
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=32.33 E-value=26 Score=36.30 Aligned_cols=37 Identities=16% Similarity=0.114 Sum_probs=22.4
Q ss_pred ceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 193 EVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 193 ~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
.+.++||||||--+-..+ .+. ..++..++.+||+-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l---~~d-------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQAL---RQD-------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHH---HH--------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHH---hhc-------cCcceEEEeCCcccCC
Confidence 599999999996554333 332 2388899999998874
No 210
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=32.06 E-value=55 Score=23.87 Aligned_cols=15 Identities=33% Similarity=0.614 Sum_probs=11.6
Q ss_pred ceEEEeCCCCCCCCcc
Q 011426 142 NLLFLETPAGVGFSYT 157 (486)
Q Consensus 142 ~~l~iD~PvGtGfSy~ 157 (486)
.-+-++-| |+|+||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 34778878 9999984
No 211
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=31.52 E-value=51 Score=34.80 Aligned_cols=73 Identities=22% Similarity=0.173 Sum_probs=45.8
Q ss_pred CeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeC---CeEEEEEcCce---eccccCChHHHH
Q 011426 397 LRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYE---GLTFATVRGAG---HEVPLFKPRAAL 470 (486)
Q Consensus 397 irVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~---~Ltf~~V~gAG---HmvP~dqP~~a~ 470 (486)
++--++.||=|-.+|.... .+.. +|.+.+.. .++ + +.+.+. -+.+....|+- |+--.-.+ ++.
T Consensus 374 ~~~~~~~~DGDgTVp~~S~-~~c~--~w~g~~~~-----~~~-~-~~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~-~l~ 442 (473)
T KOG2369|consen 374 LKGGIFYGDGDGTVPLVSA-SMCA--NWQGKQFN-----AGI-A-VTREEDKHQPVNLDESHGSSSAEHVDILGDE-ELL 442 (473)
T ss_pred ccCceeecCCCCccchHHH-Hhhh--hhhccccc-----ccc-c-cccccccCCCccccccCCccchhhhhhccCh-HHH
Confidence 5556889999999999988 4444 78877633 122 2 333332 25566666666 77666555 455
Q ss_pred HHHHHHHcCC
Q 011426 471 QLFKSFLRGD 480 (486)
Q Consensus 471 ~mi~~fl~~~ 480 (486)
+.|.+.+.+.
T Consensus 443 e~i~k~~~g~ 452 (473)
T KOG2369|consen 443 EEILKVLLGA 452 (473)
T ss_pred HHHHHHhccC
Confidence 6666766654
No 212
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=31.52 E-value=58 Score=29.52 Aligned_cols=29 Identities=17% Similarity=0.259 Sum_probs=24.2
Q ss_pred CCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 188 RYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 188 ~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
.+..-|+.|-|.||||.....+|..+...
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A~ 113 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQAP 113 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcCC
Confidence 45566999999999999999999887543
No 213
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=31.26 E-value=48 Score=33.34 Aligned_cols=68 Identities=25% Similarity=0.377 Sum_probs=41.7
Q ss_pred ccceEEEeCCCCCC-CCcc----------cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHH
Q 011426 140 EANLLFLETPAGVG-FSYT----------NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQ 208 (486)
Q Consensus 140 ~a~~l~iD~PvGtG-fSy~----------~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~ 208 (486)
..-|+|-|+-|||| |--. .....+. .+..+-.+.-|.||...|+ | +-.+|++|-|=|..-+-.
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg-~gL~~nI~~AYrFL~~~ye--p---GD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFG-QGLVQNIREAYRFLIFNYE--P---GDEIYAFGFSRGAFSARV 138 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHH-HHHHHHHHHHHHHHHHhcC--C---CCeEEEeeccchhHHHHH
Confidence 34689999888887 2110 0111121 2445556677788876553 3 457999999998766655
Q ss_pred HHHHH
Q 011426 209 LAREI 213 (486)
Q Consensus 209 la~~i 213 (486)
+|..|
T Consensus 139 lagmi 143 (423)
T COG3673 139 LAGMI 143 (423)
T ss_pred HHHHH
Confidence 55444
No 214
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=30.26 E-value=1.4e+02 Score=29.52 Aligned_cols=66 Identities=24% Similarity=0.201 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHhCCC--C-CCCceEEEccccccccHHHHHHHHHHHhcCCCCc-ce--eeEEEeeccccCcc
Q 011426 169 GRTAKDSLQFLIRWIDRFPR--Y-KGREVYLTGESYAGHYVPQLAREIMIHNSKSKHP-IN--LKGIMVGNAVTDNY 239 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~fp~--~-~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~-in--LkGi~IGng~~d~~ 239 (486)
...|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|..+...- .+ ++ |.|.+.|.+..|..
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~Y----ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPSY----APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHHh----CcccccceeEEeccCCccCHH
Confidence 34555555555554433332 2 35689999999998654 3444444331 23 88 99999999987754
No 215
>COG1647 Esterase/lipase [General function prediction only]
Probab=30.13 E-value=1.3e+02 Score=28.77 Aligned_cols=60 Identities=23% Similarity=0.381 Sum_probs=46.3
Q ss_pred CeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHHH-HHHHHH
Q 011426 397 LRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAA-LQLFKS 475 (486)
Q Consensus 397 irVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~a-~~mi~~ 475 (486)
.+++|..|.+|-++|..+.+...+++.=.. .| +....++||-+-.|+-+.- .+-+-+
T Consensus 182 ~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~----------Ke------------L~~~e~SgHVIt~D~Erd~v~e~V~~ 239 (243)
T COG1647 182 SPTLVVQGRQDEMVPAESANFIYDHVESDD----------KE------------LKWLEGSGHVITLDKERDQVEEDVIT 239 (243)
T ss_pred cchhheecccCCCCCHHHHHHHHHhccCCc----------ce------------eEEEccCCceeecchhHHHHHHHHHH
Confidence 789999999999999999999988875221 12 3445799999998876554 477777
Q ss_pred HHc
Q 011426 476 FLR 478 (486)
Q Consensus 476 fl~ 478 (486)
||.
T Consensus 240 FL~ 242 (243)
T COG1647 240 FLE 242 (243)
T ss_pred Hhh
Confidence 875
No 216
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=30.10 E-value=43 Score=31.33 Aligned_cols=49 Identities=20% Similarity=0.239 Sum_probs=30.4
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceeccccCChHH
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRA 468 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHmvP~dqP~~ 468 (486)
.+++|-..|..|.+++...++...+...= . .-+....+||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~-----------------------~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDP-----------------------D-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHH-----------------------H-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccC-----------------------C-cEEEEECCCCcCcCChhhc
Confidence 58999999999999998888777665420 1 3456678999999887653
No 217
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=29.85 E-value=1.3e+02 Score=28.37 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=34.3
Q ss_pred CCcHHHHHHHHHHHHHHHHhCCCCC-CCceEEEccccccccHHHHHHHHHHH
Q 011426 166 TGDGRTAKDSLQFLIRWIDRFPRYK-GREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 166 ~~~~~~a~~~~~fL~~f~~~fp~~~-~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
.++..+++-+.+.+...+..-++-. .+++.-+| ||||+|.+...+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 3788889999999988888765432 25788888 999999999988875
No 218
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=29.34 E-value=65 Score=31.59 Aligned_cols=41 Identities=17% Similarity=0.209 Sum_probs=30.4
Q ss_pred CceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 192 REVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 192 ~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
.++-++|||-||+-+=++|...... +++..++-.+|+-...
T Consensus 120 ~klal~GHSrGGktAFAlALg~a~~-------lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYATS-------LKFSALIGIDPVAGTS 160 (307)
T ss_pred ceEEEeecCCccHHHHHHHhccccc-------CchhheecccccCCCC
Confidence 4799999999999998888755411 5677777777764443
No 219
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=27.71 E-value=27 Score=23.89 Aligned_cols=17 Identities=29% Similarity=0.184 Sum_probs=14.0
Q ss_pred HHHhhcCCHHHHHHhcc
Q 011426 342 YAEIYYNRPDVQKALHA 358 (486)
Q Consensus 342 ~~~~ylN~~~Vr~aLhv 358 (486)
.+-.-|++||||++|++
T Consensus 15 gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 34567999999999986
No 220
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=27.21 E-value=44 Score=28.86 Aligned_cols=17 Identities=35% Similarity=0.514 Sum_probs=15.0
Q ss_pred CCCCCceEeeCCCCChh
Q 011426 92 PLNKPLVVWLNGGPGCS 108 (486)
Q Consensus 92 ~~~~P~~lwlnGGPG~s 108 (486)
..++||||-|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 45789999999999985
No 221
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=26.65 E-value=3.2e+02 Score=25.30 Aligned_cols=65 Identities=18% Similarity=0.185 Sum_probs=38.5
Q ss_pred ccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcC
Q 011426 140 EANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSK 219 (486)
Q Consensus 140 ~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~ 219 (486)
..++|+||.| |.|. .+.+..+++.++++.. . ...++++=.+..|.-.-..+....+.
T Consensus 83 ~~D~vlIDT~---Gr~~----------~d~~~~~el~~~~~~~---~----~~~~~LVlsa~~~~~~~~~~~~~~~~--- 139 (196)
T PF00448_consen 83 GYDLVLIDTA---GRSP----------RDEELLEELKKLLEAL---N----PDEVHLVLSATMGQEDLEQALAFYEA--- 139 (196)
T ss_dssp TSSEEEEEE----SSSS----------THHHHHHHHHHHHHHH---S----SSEEEEEEEGGGGGHHHHHHHHHHHH---
T ss_pred CCCEEEEecC---Ccch----------hhHHHHHHHHHHhhhc---C----CccceEEEecccChHHHHHHHHHhhc---
Confidence 3789999998 8764 2333344444433322 2 34678888777776555545444443
Q ss_pred CCCcceeeEEEe
Q 011426 220 SKHPINLKGIMV 231 (486)
Q Consensus 220 ~~~~inLkGi~I 231 (486)
+++.|+++
T Consensus 140 ----~~~~~lIl 147 (196)
T PF00448_consen 140 ----FGIDGLIL 147 (196)
T ss_dssp ----SSTCEEEE
T ss_pred ----ccCceEEE
Confidence 56788876
No 222
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=25.76 E-value=3.3e+02 Score=28.60 Aligned_cols=90 Identities=22% Similarity=0.259 Sum_probs=56.4
Q ss_pred CCCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcccCCCCCccCCcHH
Q 011426 91 NPLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYTNRSSDLLDTGDGR 170 (486)
Q Consensus 91 ~~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~ 170 (486)
...++|+||..+| |++. ..|.+- +-+=.=.+|.|+||.-. -|=|.... .+...-+..|
T Consensus 59 k~~drPtV~~T~G--------Y~~~--~~p~r~----------Ept~Lld~NQl~vEhRf-F~~SrP~p-~DW~~Lti~Q 116 (448)
T PF05576_consen 59 KDFDRPTVLYTEG--------YNVS--TSPRRS----------EPTQLLDGNQLSVEHRF-FGPSRPEP-ADWSYLTIWQ 116 (448)
T ss_pred cCCCCCeEEEecC--------cccc--cCcccc----------chhHhhccceEEEEEee-ccCCCCCC-CCcccccHhH
Confidence 4567899998875 3331 123321 22223357999999751 12233222 1222236789
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEccccccccH
Q 011426 171 TAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYV 206 (486)
Q Consensus 171 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 206 (486)
+|.|.....+.|=..+| .+++-+|-|=||+-.
T Consensus 117 AA~D~Hri~~A~K~iY~----~kWISTG~SKGGmTa 148 (448)
T PF05576_consen 117 AASDQHRIVQAFKPIYP----GKWISTGGSKGGMTA 148 (448)
T ss_pred hhHHHHHHHHHHHhhcc----CCceecCcCCCceeE
Confidence 99999999998866676 379999999999763
No 223
>PRK11524 putative methyltransferase; Provisional
Probab=25.44 E-value=3.5e+02 Score=26.54 Aligned_cols=77 Identities=18% Similarity=0.347 Sum_probs=40.6
Q ss_pred cccceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCC-CC-CCceEEEccccccccHHHHHHHHHHH
Q 011426 139 TEANLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPR-YK-GREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 139 ~~a~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~-~~-~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
...++|+.|+|-++|.+|....... . .++...++..|+...-+ ++ +-.+||.. .....+.+...+ +.
T Consensus 26 ~siDlIitDPPY~~~~~~~~~~~~~---~----~~~~~~~l~~~l~~~~rvLK~~G~i~i~~---~~~~~~~~~~~~-~~ 94 (284)
T PRK11524 26 ESVDLIFADPPYNIGKNFDGLIEAW---K----EDLFIDWLYEWIDECHRVLKKQGTMYIMN---STENMPFIDLYC-RK 94 (284)
T ss_pred CcccEEEECCCcccccccccccccc---c----HHHHHHHHHHHHHHHHHHhCCCcEEEEEc---CchhhhHHHHHH-hc
Confidence 3579999999998877665432221 1 23444556666654322 22 23477763 333445443332 21
Q ss_pred hcCCCCcceeeEEEee
Q 011426 217 NSKSKHPINLKGIMVG 232 (486)
Q Consensus 217 n~~~~~~inLkGi~IG 232 (486)
...+++.+|-
T Consensus 95 ------~f~~~~~iiW 104 (284)
T PRK11524 95 ------LFTIKSRIVW 104 (284)
T ss_pred ------CcceEEEEEE
Confidence 1446666654
No 224
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=25.34 E-value=63 Score=28.23 Aligned_cols=52 Identities=21% Similarity=0.299 Sum_probs=36.7
Q ss_pred ceEEEeCCCCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccc
Q 011426 142 NLLFLETPAGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGES 200 (486)
Q Consensus 142 ~~l~iD~PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GES 200 (486)
=||=|| |.||+.-.....+...+|+...+.+.+.-+..++.++ ...+..|+|
T Consensus 22 ivvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~----~~~~aY~~S 73 (135)
T PF04446_consen 22 IVVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFP----DIVLAYGQS 73 (135)
T ss_dssp EEEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSS----SEEEEEEET
T ss_pred EEEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCC----CcEEEEEcC
Confidence 488899 9999875554334445788899999999999998887 266777766
No 225
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=25.06 E-value=70 Score=30.41 Aligned_cols=27 Identities=30% Similarity=0.348 Sum_probs=22.7
Q ss_pred CCeEEEEecCCCCCCCchhHHHHHHhc
Q 011426 396 GLRVWVFSGDVDSVVPVTATRYSLAQL 422 (486)
Q Consensus 396 girVLIy~Gd~D~i~~~~Gt~~~i~~L 422 (486)
+++++|+||+.|..|+....+..+++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 578999999999999998877776653
No 226
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=24.51 E-value=43 Score=22.21 Aligned_cols=12 Identities=33% Similarity=0.944 Sum_probs=6.0
Q ss_pred CceEeeCCCCCh
Q 011426 96 PLVVWLNGGPGC 107 (486)
Q Consensus 96 P~~lwlnGGPG~ 107 (486)
--.||++|-||-
T Consensus 25 gRTiWFqGdPGp 36 (39)
T PF09292_consen 25 GRTIWFQGDPGP 36 (39)
T ss_dssp S-EEEESS---T
T ss_pred CCEEEeeCCCCC
Confidence 457899998883
No 227
>PTZ00333 triosephosphate isomerase; Provisional
Probab=24.46 E-value=1.5e+02 Score=28.98 Aligned_cols=61 Identities=16% Similarity=0.374 Sum_probs=44.2
Q ss_pred cHHHHHHHHHHHHHHHHh-CCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 168 DGRTAKDSLQFLIRWIDR-FPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
+.+.++++..++++++.. +.......+-|. |||---|.-+..+... -++.|+.||.+.+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~-------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ-------PDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC-------CCCCEEEEehHhhhh
Confidence 346788899999998763 432222223232 8999999999999876 459999999998763
No 228
>PRK14565 triosephosphate isomerase; Provisional
Probab=24.16 E-value=1.4e+02 Score=28.84 Aligned_cols=54 Identities=17% Similarity=0.302 Sum_probs=41.2
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 168 DGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
+.+.++....+++++. . ++-|. |||---|.-+..+.+. -++.|+.||.+.+++.
T Consensus 172 ~~e~i~~~~~~Ir~~~-------~-~~~Il---YGGSV~~~N~~~l~~~-------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD-------S-KSHII---YGGSVNQENIRDLKSI-------NQLSGVLVGSASLDVD 225 (237)
T ss_pred CHHHHHHHHHHHHHhC-------C-CceEE---EcCccCHhhHHHHhcC-------CCCCEEEEechhhcHH
Confidence 4466888889998863 1 22222 9999999999999885 3499999999998765
No 229
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=24.16 E-value=56 Score=30.34 Aligned_cols=28 Identities=18% Similarity=0.011 Sum_probs=24.4
Q ss_pred CeEEEEecCCCCCCCchhHHHHHHhccc
Q 011426 397 LRVWVFSGDVDSVVPVTATRYSLAQLKL 424 (486)
Q Consensus 397 irVLIy~Gd~D~i~~~~Gt~~~i~~L~w 424 (486)
-+++|.+|..|.+||....+...+.|.-
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 4578999999999999999999888753
No 230
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=24.11 E-value=1.4e+02 Score=33.25 Aligned_cols=62 Identities=18% Similarity=0.307 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHHHHHHHh-CCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 168 DGRTAKDSLQFLIRWIDR-FPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 168 ~~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
+.+.|++...+|++++.. +..-....+=|. |||---|.-+..|... -++.|+.||...+++.
T Consensus 573 t~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~-------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 573 TPEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ-------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred CHHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC-------CCCCeEEeehHhcCHH
Confidence 356788899999999863 322211222222 9999999999999887 4599999999888764
No 231
>PRK03995 hypothetical protein; Provisional
Probab=24.08 E-value=1.3e+02 Score=29.44 Aligned_cols=47 Identities=19% Similarity=0.281 Sum_probs=33.5
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHH
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIH 216 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 216 (486)
++..+++-+.+++...+..-+.-..+++.-+| ||||+|.....+++.
T Consensus 157 ~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 157 KNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred CCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 56677777777777776532211234677788 999999999888764
No 232
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=22.77 E-value=76 Score=25.64 Aligned_cols=18 Identities=17% Similarity=0.464 Sum_probs=12.9
Q ss_pred ceEeeCCCCChhhhchhhh
Q 011426 97 LVVWLNGGPGCSSVAYGAS 115 (486)
Q Consensus 97 ~~lwlnGGPG~ss~~~g~~ 115 (486)
+=|.+.|| |||++.|++=
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ 45 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLI 45 (92)
T ss_pred EEEEEeCC-CccCcccceE
Confidence 66777777 9998765443
No 233
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=22.62 E-value=1.1e+02 Score=31.02 Aligned_cols=45 Identities=11% Similarity=0.092 Sum_probs=35.3
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHH
Q 011426 167 GDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIM 214 (486)
Q Consensus 167 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~ 214 (486)
+....++++...+.+.+.... .+++.|.|||.||.-+..++..+.
T Consensus 105 ~~~~~~~ql~~~V~~~l~~~g---a~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLAKTG---AKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred cccccHHHHHHHHHHHHhhcC---CCceEEEeecccchhhHHHHhhcC
Confidence 445678888888888777554 579999999999999987666554
No 234
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=22.59 E-value=1.5e+02 Score=27.39 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=30.4
Q ss_pred hCCCeEEEEecCCCCCCCchhHHHHHHhcccCCCccccceeEcCeeeEEEEEeCCeEEEEEcCceec
Q 011426 394 AGGLRVWVFSGDVDSVVPVTATRYSLAQLKLTTKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHE 460 (486)
Q Consensus 394 ~~girVLIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~q~~G~~~~~~~Ltf~~V~gAGHm 460 (486)
+...+||+..|..|..++....+...+.|.=.+ ..+.+.+..|++|=
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~y~ga~Hg 189 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAAG--------------------VDVEVHVYPGAGHG 189 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTT--------------------TTEEEEEETT--TT
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhcC--------------------CcEEEEECCCCccc
Confidence 345899999999999999998888887773111 13567778889996
No 235
>PRK06762 hypothetical protein; Provisional
Probab=22.12 E-value=45 Score=29.55 Aligned_cols=13 Identities=15% Similarity=0.501 Sum_probs=11.8
Q ss_pred CceEeeCCCCChh
Q 011426 96 PLVVWLNGGPGCS 108 (486)
Q Consensus 96 P~~lwlnGGPG~s 108 (486)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999985
No 236
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=21.97 E-value=4.1e+02 Score=27.62 Aligned_cols=133 Identities=14% Similarity=0.222 Sum_probs=72.5
Q ss_pred CceEEEEEEEecC-C-CCCCCceEeeCCCCChhhhchhhhcccCCeEEcCCCCceecCCCCcccccceEEEeCCCCCCCC
Q 011426 78 GRALFYWLTEATH-N-PLNKPLVVWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFS 155 (486)
Q Consensus 78 ~~~lfy~f~es~~-~-~~~~P~~lwlnGGPG~ss~~~g~~~E~GP~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfS 155 (486)
|-++||.-..-.. + +++---+|.++|=||+=- =|.-.=|..-++.... ..++ -.+.||----| |-|||
T Consensus 133 GL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~----EFykfIPlLT~p~~hg-~~~d----~~FEVI~PSlP-GygwS 202 (469)
T KOG2565|consen 133 GLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR----EFYKFIPLLTDPKRHG-NESD----YAFEVIAPSLP-GYGWS 202 (469)
T ss_pred ceeEEEEEecCCccccCCcccceEEecCCCchHH----HHHhhhhhhcCccccC-Cccc----eeEEEeccCCC-CcccC
Confidence 4578887553321 1 222223567899999843 2233334433332110 0011 12344444434 66666
Q ss_pred cccCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccc
Q 011426 156 YTNRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAV 235 (486)
Q Consensus 156 y~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 235 (486)
-..+..++ +..++|+-+...+- ++.-++|||=|--||.....-+|....++ +.|+=+-+..
T Consensus 203 d~~sk~GF---n~~a~ArvmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLyPen---------V~GlHlnm~~ 263 (469)
T KOG2565|consen 203 DAPSKTGF---NAAATARVMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLYPEN---------VLGLHLNMCF 263 (469)
T ss_pred cCCccCCc---cHHHHHHHHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhcchh---------hhHhhhcccc
Confidence 65555554 66677776665543 34456899998888887777777666554 5555555544
Q ss_pred cCcc
Q 011426 236 TDNY 239 (486)
Q Consensus 236 ~d~~ 239 (486)
+.+.
T Consensus 264 ~~s~ 267 (469)
T KOG2565|consen 264 VNSP 267 (469)
T ss_pred cCCc
Confidence 4443
No 237
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=21.29 E-value=1.1e+02 Score=31.97 Aligned_cols=35 Identities=34% Similarity=0.697 Sum_probs=25.4
Q ss_pred eEeeeEEecCCCCceEEEEEEEecCCCCCCCce-EeeCC
Q 011426 66 QFSGYVPVNKVPGRALFYWLTEATHNPLNKPLV-VWLNG 103 (486)
Q Consensus 66 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~-lwlnG 103 (486)
..+||++.+. .+++.. ..|+.....+.|+| +||.|
T Consensus 200 ~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 200 YKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 5799999986 577777 56664444566865 89875
No 238
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=21.24 E-value=3.4e+02 Score=29.07 Aligned_cols=116 Identities=17% Similarity=0.341 Sum_probs=70.9
Q ss_pred eEEEEEEEecCCCCCCCceEeeCCCCChhhhc-hhhhcccC-CeEEcCCCCceecCCCCcccccceEEEeCCCCCCCCcc
Q 011426 80 ALFYWLTEATHNPLNKPLVVWLNGGPGCSSVA-YGASEEIG-PFRINKTASGLYLNKLSWNTEANLLFLETPAGVGFSYT 157 (486)
Q Consensus 80 ~lfy~f~es~~~~~~~P~~lwlnGGPG~ss~~-~g~~~E~G-P~~~~~~~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~ 157 (486)
.++|.|-+- .-.-||.+++.|==.+-+.. +++|-.+| || ||+=|+-+--| ++
T Consensus 277 Ei~yYFnPG---D~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~Pf---------------------LL~~DpRleGG-aF- 330 (511)
T TIGR03712 277 EFIYYFNPG---DFKPPLNVYFSGYRPAEGFEGYFMMKRLGAPF---------------------LLIGDPRLEGG-AF- 330 (511)
T ss_pred eeEEecCCc---CCCCCeEEeeccCcccCcchhHHHHHhcCCCe---------------------EEeeccccccc-ee-
Confidence 577777443 23459999999876666653 23333333 55 45556444444 22
Q ss_pred cCCCCCccCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccC
Q 011426 158 NRSSDLLDTGDGRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTD 237 (486)
Q Consensus 158 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 237 (486)
| .+.++--+.+.+.|++-++.- .|..+++.|.|=|+|..=+-+.++. ++=.+|+||=|+++
T Consensus 331 -----Y--lGs~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga~-----------l~P~AIiVgKPL~N 391 (511)
T TIGR03712 331 -----Y--LGSDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGAK-----------LSPHAIIVGKPLVN 391 (511)
T ss_pred -----e--eCcHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhccc-----------CCCceEEEcCcccc
Confidence 1 133334445566666655432 4667899999999987554444432 56788999999887
Q ss_pred ccc
Q 011426 238 NYY 240 (486)
Q Consensus 238 ~~~ 240 (486)
-.+
T Consensus 392 LGt 394 (511)
T TIGR03712 392 LGT 394 (511)
T ss_pred hhh
Confidence 543
No 239
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=21.09 E-value=1.1e+02 Score=28.62 Aligned_cols=86 Identities=19% Similarity=0.337 Sum_probs=52.1
Q ss_pred eecCCCCcccccceEEEeCC---CCCCCCcccCCCCCccCCcHHHHHHHHHHHHHHHHh--CCCCCCCceEEEccccccc
Q 011426 130 LYLNKLSWNTEANLLFLETP---AGVGFSYTNRSSDLLDTGDGRTAKDSLQFLIRWIDR--FPRYKGREVYLTGESYAGH 204 (486)
Q Consensus 130 l~~n~~sw~~~a~~l~iD~P---vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~--fp~~~~~~~yi~GESYgG~ 204 (486)
+.++--+|.+. +|--+ | +|||- +-..++|+++...|+.|++. -+.-...-=.|.|-|--|
T Consensus 149 iad~v~~w~ni--viAYE-PVWAIGTGk-----------~atp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g- 213 (247)
T KOG1643|consen 149 IADKVKDWSNI--VIAYE-PVWAIGTGK-----------TATPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNG- 213 (247)
T ss_pred HHHhcCCccce--EEEee-ceeeecCCC-----------CCCHHHHHHHHHHHHHHHhhcchhhhhhceEEEecccccc-
Confidence 44556677754 33334 4 57772 13456899999999999986 222222223454444443
Q ss_pred cHHHHHHHHHHHhcCCCCcceeeEEEeeccccCccc
Q 011426 205 YVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNYY 240 (486)
Q Consensus 205 yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~~ 240 (486)
.=+..|.+. -.+.|+.+|...+-|+.
T Consensus 214 ---~N~~el~~~-------~diDGFLVGGaSLKpeF 239 (247)
T KOG1643|consen 214 ---GNCKELAKK-------PDIDGFLVGGASLKPEF 239 (247)
T ss_pred ---ccHHHhccc-------ccccceEEcCcccChHH
Confidence 344455444 34899999998877753
No 240
>PRK15492 triosephosphate isomerase; Provisional
Probab=20.84 E-value=1.9e+02 Score=28.26 Aligned_cols=60 Identities=17% Similarity=0.288 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCcc
Q 011426 169 GRTAKDSLQFLIRWID-RFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDNY 239 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~~ 239 (486)
.+.+++..++|++++. .+.+- ...+-|. |||---|.-+..|... -++.|+.||...+++.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~-------~diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ-------PHIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC-------CCCCEEEeehhhcCHH
Confidence 4567888899999864 34322 2233333 9999999999999877 3499999999888775
No 241
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=20.84 E-value=1.3e+02 Score=20.14 Aligned_cols=27 Identities=15% Similarity=0.434 Sum_probs=12.4
Q ss_pred eEEEEEEEecCCCCCCCceEeeCCCCC
Q 011426 80 ALFYWLTEATHNPLNKPLVVWLNGGPG 106 (486)
Q Consensus 80 ~lfy~f~es~~~~~~~P~~lwlnGGPG 106 (486)
+-+|||-.++.......--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 455666333333333344455555554
No 242
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=20.84 E-value=2.1e+02 Score=26.85 Aligned_cols=55 Identities=5% Similarity=0.044 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEccccccccHHHHHHHHHHHhcCCCCcceeeEEEeeccccCc
Q 011426 169 GRTAKDSLQFLIRWIDRFPRYKGREVYLTGESYAGHYVPQLAREIMIHNSKSKHPINLKGIMVGNAVTDN 238 (486)
Q Consensus 169 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d~ 238 (486)
.+.++++..+++ +-+ +... .+-|. |||---|.=+..+... -++.|+.||.+.+++
T Consensus 150 ~~~~~~v~~~ir-~~~---~~~~-~~~Il---YGGSV~~~N~~~l~~~-------~~iDG~LvG~Asl~a 204 (205)
T TIGR00419 150 PAQPEVVHGSVR-AVK---EVNE-SVRVL---CGAGISTGEDAELAAQ-------LGAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHHH-hhh---hhcC-CceEE---EeCCCCHHHHHHHhcC-------CCCCEEEEeeeeecC
Confidence 356777888887 221 1111 22232 9999999999999877 459999999998865
No 243
>COG0218 Predicted GTPase [General function prediction only]
Probab=20.42 E-value=1.4e+02 Score=27.95 Aligned_cols=27 Identities=22% Similarity=0.522 Sum_probs=20.3
Q ss_pred CCceecCCCCcccccceEEEeCCCCCCCCccc
Q 011426 127 ASGLYLNKLSWNTEANLLFLETPAGVGFSYTN 158 (486)
Q Consensus 127 ~~~l~~n~~sw~~~a~~l~iD~PvGtGfSy~~ 158 (486)
|.+-..|-+.|... +.+||-| ||.|+.
T Consensus 58 GrTq~iNff~~~~~--~~lVDlP---GYGyAk 84 (200)
T COG0218 58 GRTQLINFFEVDDE--LRLVDLP---GYGYAK 84 (200)
T ss_pred CccceeEEEEecCc--EEEEeCC---Cccccc
Confidence 34566677777766 8899999 888864
No 244
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=20.38 E-value=76 Score=25.34 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEccccc
Q 011426 174 DSLQFLIRWIDRFPRYKGREVYLTGESYA 202 (486)
Q Consensus 174 ~~~~fL~~f~~~fp~~~~~~~yi~GESYg 202 (486)
++|++.+.|+-+| |..+.|.+-|+||+
T Consensus 8 dIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 8 DIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hHHHHHHHHHHHH--HccceEEEecchHH
Confidence 5777788877664 34678999999994
Done!