BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011427
(486 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547796|ref|XP_002514955.1| NADH-ubiquinone oxidoreductase flavoprotein, putative [Ricinus
communis]
gi|223546006|gb|EEF47509.1| NADH-ubiquinone oxidoreductase flavoprotein, putative [Ricinus
communis]
Length = 486
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/486 (93%), Positives = 472/486 (97%)
Query: 1 MAPMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
MAP++G+ +LQRA+L+R S+RL+VG+RSFST+ +A + QP PPPPPPEKTHFGGLKD
Sbjct: 1 MAPIRGIFNLQRAALIRRQSDRLAVGIRSFSTEATKSAGSSQPLPPPPPPEKTHFGGLKD 60
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG+HDPFLKGAMKRGDW+RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNER NLERAR+EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERINLERARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
VSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
DYDALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT WLWMIME
Sbjct: 361 DYDALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTPWLWMIME 420
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE AERE
Sbjct: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKERAERE 480
Query: 481 LLEATA 486
LLEA A
Sbjct: 481 LLEAAA 486
>gi|357439369|ref|XP_003589961.1| NADH-quinone oxidoreductase subunit F [Medicago truncatula]
gi|355479009|gb|AES60212.1| NADH-quinone oxidoreductase subunit F [Medicago truncatula]
Length = 568
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/482 (93%), Positives = 475/482 (98%)
Query: 4 MKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 63
M+G+LSL+RA LVR +SE+L +G+R FSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR
Sbjct: 8 MRGILSLKRAVLVRQHSEKLGLGVRLFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 67
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWS 123
IFTNLYG+HDPFLKGAMKRGDWHRTKDLV+KG DWIVNE+KKSGLRGRGGAGFPSGLKWS
Sbjct: 68 IFTNLYGLHDPFLKGAMKRGDWHRTKDLVIKGTDWIVNEMKKSGLRGRGGAGFPSGLKWS 127
Query: 124 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 183
FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIYIRG
Sbjct: 128 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRG 187
Query: 184 EYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 243
EYVNER NLE+AR+EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ
Sbjct: 188 EYVNERLNLEKARKEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 247
Query: 244 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSG 303
GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNN+GTKL+CVSG
Sbjct: 248 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLYCVSG 307
Query: 304 HVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 363
HVNKPCTVEEEMS+PLKELI+RHCGGVRGGWDNLLA+IPGGSSVPL+PKH+CDDVLMDYD
Sbjct: 308 HVNKPCTVEEEMSMPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKHVCDDVLMDYD 367
Query: 364 ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 423
ALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+K
Sbjct: 368 ALKAVGSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMK 427
Query: 424 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLE 483
VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE+A+RELL+
Sbjct: 428 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKENAQRELLQ 487
Query: 484 AT 485
AT
Sbjct: 488 AT 489
>gi|224110746|ref|XP_002315622.1| predicted protein [Populus trichocarpa]
gi|222864662|gb|EEF01793.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/486 (93%), Positives = 468/486 (96%), Gaps = 1/486 (0%)
Query: 1 MAPMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
MAP++G+ SLQR +LVR SERL VG RSFSTQ + A PQPPPPPPPPEKTHFGGLKD
Sbjct: 1 MAPIRGIFSLQRTALVR-QSERLGVGFRSFSTQAPTNAGAPQPPPPPPPPEKTHFGGLKD 59
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTN+YG+HDPFLKGAMKRGDW+RTKDLVLKG DWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 60 EDRIFTNVYGLHDPFLKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGAGFPSGL 119
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY
Sbjct: 120 KWSFMPKTSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 179
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNER NLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 180 IRGEYVNERINLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 239
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPAN+GLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKLFC
Sbjct: 240 GKQGKPRLKPPFPANSGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 299
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
VSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 300 VSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 359
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
DYDALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 360 DYDALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 419
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE AERE
Sbjct: 420 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKERAERE 479
Query: 481 LLEATA 486
LLEA A
Sbjct: 480 LLEAAA 485
>gi|356533373|ref|XP_003535239.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like isoform 1 [Glycine max]
gi|356533375|ref|XP_003535240.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like isoform 2 [Glycine max]
Length = 482
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/482 (92%), Positives = 473/482 (98%), Gaps = 1/482 (0%)
Query: 4 MKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 63
M+G+LS+ R +LV+ +SE+L +G R FSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR
Sbjct: 1 MRGILSV-RTALVQHHSEKLGLGFRVFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 59
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWS 123
IFTNLYG+HDPFLKGAMKRGDWHRTKDLV+KG DWIVNE+KKSGLRGRGGAGFPSGLKWS
Sbjct: 60 IFTNLYGLHDPFLKGAMKRGDWHRTKDLVVKGTDWIVNEMKKSGLRGRGGAGFPSGLKWS 119
Query: 124 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 183
FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG
Sbjct: 120 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 179
Query: 184 EYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 243
EYVNERKNLE+AR+EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ
Sbjct: 180 EYVNERKNLEKAREEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 239
Query: 244 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSG 303
GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNN+GTKLFCVSG
Sbjct: 240 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLFCVSG 299
Query: 304 HVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 363
HVNKPCTVEEEMSIPLKELI+RHCGG+RGGWDNLLAVIPGGSSVPL+PKH+CDD+LMDYD
Sbjct: 300 HVNKPCTVEEEMSIPLKELIERHCGGIRGGWDNLLAVIPGGSSVPLIPKHVCDDILMDYD 359
Query: 364 ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 423
ALKAV +GLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW IMER+K
Sbjct: 360 ALKAVGTGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWTIMERMK 419
Query: 424 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLE 483
VGNAKLEEIDMLQE+TKQIEGHTICALGDAAAWPVQGLI+HFRPELERRI+EHAERELL+
Sbjct: 420 VGNAKLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIKHFRPELERRIREHAERELLQ 479
Query: 484 AT 485
AT
Sbjct: 480 AT 481
>gi|356501803|ref|XP_003519713.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Glycine max]
Length = 482
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/482 (92%), Positives = 471/482 (97%), Gaps = 1/482 (0%)
Query: 4 MKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 63
M+G+LS+ R +LV+ SE+L +G R FSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR
Sbjct: 1 MRGILSV-RTALVQHRSEKLGLGFRLFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 59
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWS 123
IFTNLYG+HDPFLKGAMKRGDWHRTKDLVLKG DWIV+E+KKSGLRGRGGAGFPSGLKWS
Sbjct: 60 IFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVSEMKKSGLRGRGGAGFPSGLKWS 119
Query: 124 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 183
FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG
Sbjct: 120 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 179
Query: 184 EYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 243
EYVNERKNLE+ARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ
Sbjct: 180 EYVNERKNLEKARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 239
Query: 244 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSG 303
GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNN+GTKLFCVSG
Sbjct: 240 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLFCVSG 299
Query: 304 HVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 363
HVNKPCTVEEEMSIPLKELI+RHCGG+RGGWDNLLAVIPGGSSVPL+PKH+CDD+ MDYD
Sbjct: 300 HVNKPCTVEEEMSIPLKELIERHCGGIRGGWDNLLAVIPGGSSVPLIPKHVCDDIFMDYD 359
Query: 364 ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 423
ALKAV +GLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW IMER+K
Sbjct: 360 ALKAVGTGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWTIMERMK 419
Query: 424 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLE 483
VGNAKLEEIDMLQE+TKQIEGHTICALGDAAAWPVQGLI+HFRPELERRI+EHAERELL+
Sbjct: 420 VGNAKLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIKHFRPELERRIREHAERELLQ 479
Query: 484 AT 485
AT
Sbjct: 480 AT 481
>gi|639834|emb|CAA58823.1| NADH dehydrogenase [Solanum tuberosum]
Length = 487
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/486 (90%), Positives = 469/486 (96%)
Query: 1 MAPMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
MAP+KG+LSLQR +L + SER + R FSTQ ASTASTPQP PPPPPPE+THFGGLKD
Sbjct: 1 MAPIKGLLSLQRTALAQRSSERWGLYGRLFSTQAASTASTPQPTPPPPPPERTHFGGLKD 60
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG+HDP+LKGAMKRGDW+RTKDLV+KG+DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61 EDRIFTNLYGLHDPYLKGAMKRGDWYRTKDLVIKGSDWIVNEMKKSGLRGRGGAGFPSGL 120
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA AAYIY
Sbjct: 121 KWSFMPKTTDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAKAAYIY 180
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNERK+L++ARQEAY AGLLGKNACGSGYDFDV+IH+GAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKSLQKARQEAYEAGLLGKNACGSGYDFDVYIHFGAGAYICGEETALLESLE 240
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNN+GTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLFC 300
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
+SGHVNKPCTVEEEMSI LKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPK+IC+DVLM
Sbjct: 301 ISGHVNKPCTVEEEMSISLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKNICEDVLM 360
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
D+DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+EHAERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIREHAERE 480
Query: 481 LLEATA 486
L +A A
Sbjct: 481 LQQAAA 486
>gi|226532265|ref|NP_001148767.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Zea mays]
gi|195621992|gb|ACG32826.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Zea mays]
Length = 504
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/459 (94%), Positives = 454/459 (98%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RSFSTQ A+T+STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYG+HDPFLKGA+KRGDW+R
Sbjct: 46 RSFSTQAATTSSTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAVKRGDWYR 105
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TKDLV+KGADWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT
Sbjct: 106 TKDLVIKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 165
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNER NLE+ARQEAYAAGLLGK
Sbjct: 166 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLEKARQEAYAAGLLGK 225
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN
Sbjct: 226 NACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 285
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAVSPTILRRGP+WFASFGRKNNSGTKL+C+SGHVNKPCTVEEEMSIPLKEL++RHC
Sbjct: 286 VETVAVSPTILRRGPEWFASFGRKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELLERHC 345
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV
Sbjct: 346 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 405
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
DAIARLSYFYKHESCGQCTPCREGT WLWMIMERLKVG+AKLEEIDMLQEVTKQIEGHTI
Sbjct: 406 DAIARLSYFYKHESCGQCTPCREGTPWLWMIMERLKVGDAKLEEIDMLQEVTKQIEGHTI 465
Query: 448 CALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
CALGDAAAWPVQGLIRHFRPELE+RI+E AERELL A+A
Sbjct: 466 CALGDAAAWPVQGLIRHFRPELEKRIRERAERELLAASA 504
>gi|357111131|ref|XP_003557368.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Brachypodium distachyon]
Length = 535
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/465 (93%), Positives = 454/465 (97%)
Query: 22 RLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMK 81
RL RSFSTQ AST+STPQPPPPPPPPEKTHFG LKDEDRIFTNLYG+HDPFLKGAMK
Sbjct: 70 RLYPAGRSFSTQAASTSSTPQPPPPPPPPEKTHFGDLKDEDRIFTNLYGLHDPFLKGAMK 129
Query: 82 RGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNAD 141
RGDW+RTKDLV+KGADWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNAD
Sbjct: 130 RGDWYRTKDLVIKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNAD 189
Query: 142 ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYA 201
ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNER NLE+AR EAYA
Sbjct: 190 ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLEKARLEAYA 249
Query: 202 AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 261
+GLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC
Sbjct: 250 SGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 309
Query: 262 PTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKE 321
PTTVTNVETVAV+PTILRRGP+WFASFGRKNNSGTKL+C+SGHVNKPCTVEEEMSIPLKE
Sbjct: 310 PTTVTNVETVAVAPTILRRGPEWFASFGRKNNSGTKLYCISGHVNKPCTVEEEMSIPLKE 369
Query: 322 LIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
LI++HCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV+VMD
Sbjct: 370 LIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMD 429
Query: 382 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ
Sbjct: 430 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 489
Query: 442 IEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
IEGHTICALGDAAAWPVQGLIRHFRPELERRI++ A+RELL A +
Sbjct: 490 IEGHTICALGDAAAWPVQGLIRHFRPELERRIRDRADRELLTAAS 534
>gi|326490041|dbj|BAJ94094.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326490708|dbj|BAJ90021.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/479 (92%), Positives = 460/479 (96%), Gaps = 1/479 (0%)
Query: 9 SLQRASLVRCYS-ERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTN 67
SL RA R S L RSFSTQ A+T+STPQPPPPPPPPEKTHFG LKDEDRIFTN
Sbjct: 26 SLSRAQPTRSPSCADLYPAGRSFSTQAATTSSTPQPPPPPPPPEKTHFGDLKDEDRIFTN 85
Query: 68 LYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK 127
LYG+HDPFLKGAMKRGDW+RTKDLV+KGADWIVNE+KKSGLRGRGGAGFPSGLKWSFMPK
Sbjct: 86 LYGLHDPFLKGAMKRGDWNRTKDLVIKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPK 145
Query: 128 VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVN 187
VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVN
Sbjct: 146 VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVN 205
Query: 188 ERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPR 247
ER NLE+ARQEAYA+GLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPR
Sbjct: 206 ERLNLEKARQEAYASGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPR 265
Query: 248 LKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNK 307
LKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKL+C+SGHVNK
Sbjct: 266 LKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLYCISGHVNK 325
Query: 308 PCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKA 367
PCTVEEEMSIPLKELI++HCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKA
Sbjct: 326 PCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKA 385
Query: 368 VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNA 427
VQSGLGTAAV+VMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNA
Sbjct: 386 VQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNA 445
Query: 428 KLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
KLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI++ A+RELL A +
Sbjct: 446 KLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRDRADRELLMAAS 504
>gi|225462161|ref|XP_002266661.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Vitis vinifera]
Length = 487
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/486 (91%), Positives = 467/486 (96%)
Query: 1 MAPMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
MAP++G+L+LQR +LV S++ G R+FSTQ A+TAS QPPPPPPPPEKTHFGGLKD
Sbjct: 1 MAPIRGILTLQRMALVSRQSKKWGPGCRAFSTQAATTASASQPPPPPPPPEKTHFGGLKD 60
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG+HDPFLKGAMKRGDW+RTKD+VLKG+DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDIVLKGSDWIVNEMKKSGLRGRGGAGFPSGL 120
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+ AYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATTAYIY 180
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNERKNLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFA FGRKNN+GTKL+C
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFAGFGRKNNAGTKLYC 300
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
VSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL M+ME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLLMMME 420
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
RLKVGNA LEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AERE
Sbjct: 421 RLKVGNANLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480
Query: 481 LLEATA 486
LLE A
Sbjct: 481 LLEVAA 486
>gi|449437654|ref|XP_004136606.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Cucumis sativus]
gi|449511484|ref|XP_004163967.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Cucumis sativus]
Length = 480
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/480 (92%), Positives = 467/480 (97%)
Query: 7 VLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFT 66
+L LQR SL RCY ++ +GLR+FS+QGA+ +PQPP PPPPPEKTHFGGLKDEDRIFT
Sbjct: 1 MLYLQRRSLARCYIDQWGIGLRAFSSQGAAAPGSPQPPAPPPPPEKTHFGGLKDEDRIFT 60
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
NLYG+HDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 61 NLYGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 120
Query: 127 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 186
KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIYIRGEYV
Sbjct: 121 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 180
Query: 187 NERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 246
NERKNLE+AR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP
Sbjct: 181 NERKNLEKARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 240
Query: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVN 306
RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKLFCVSGHVN
Sbjct: 241 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 300
Query: 307 KPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 366
KPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK
Sbjct: 301 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 360
Query: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 426
AVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGN
Sbjct: 361 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 420
Query: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRI+E AEREL++A A
Sbjct: 421 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 480
>gi|15242306|ref|NP_196470.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Arabidopsis
thaliana]
gi|75171894|sp|Q9FNN5.1|NDUV1_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; Flags: Precursor
gi|9759347|dbj|BAB10002.1| NADH dehydrogenase [Arabidopsis thaliana]
gi|20260144|gb|AAM12970.1| NADH dehydrogenase [Arabidopsis thaliana]
gi|30387597|gb|AAP31964.1| At5g08530 [Arabidopsis thaliana]
gi|332003932|gb|AED91315.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Arabidopsis
thaliana]
Length = 486
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/486 (91%), Positives = 472/486 (97%)
Query: 1 MAPMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
MAP++G+L LQRA + S RL+ LRSFSTQ AST++TPQPPPPPPPPEKTHFGGLKD
Sbjct: 1 MAPVRGILGLQRAVSIWKESNRLTPALRSFSTQAASTSTTPQPPPPPPPPEKTHFGGLKD 60
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG+HDPFLKGAMKRGDWHRTKDLVLKG DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61 EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGL 120
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNER NLE+AR+EAYAAGLLGKNACGSGYDF+V+IH+GAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERLNLEKARREAYAAGLLGKNACGSGYDFEVYIHFGAGAYICGEETALLESLE 240
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WF+SFGRKNN+GTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFC 300
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
+SGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLA+IPGGSSVPL+PK+IC+DVLM
Sbjct: 301 ISGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKNICEDVLM 360
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
D+DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480
Query: 481 LLEATA 486
LL+A A
Sbjct: 481 LLQAAA 486
>gi|21593325|gb|AAM65274.1| NADH dehydrogenase [Arabidopsis thaliana]
Length = 486
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/486 (91%), Positives = 471/486 (96%)
Query: 1 MAPMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
MAP++G+L LQRA + S RL+ LRSFSTQ AST++TPQPPPPPPPPEKTHFGGLKD
Sbjct: 1 MAPVRGILGLQRAVSIWKESNRLTPALRSFSTQAASTSTTPQPPPPPPPPEKTHFGGLKD 60
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG+HDPFLKGAMKRGDWHRTKDLVLKG DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61 EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGL 120
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNER NLE+AR+EAYAAGLLGKNACGSGYDF+V+IH+GAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERLNLEKARREAYAAGLLGKNACGSGYDFEVYIHFGAGAYICGEETALLESLE 240
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WF+SFGRKNN+GTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFC 300
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
+S HVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLA+IPGGSSVPL+PK+IC+DVLM
Sbjct: 301 ISXHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKNICEDVLM 360
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
D+DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480
Query: 481 LLEATA 486
LL+A A
Sbjct: 481 LLQAAA 486
>gi|147841727|emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera]
Length = 489
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/485 (91%), Positives = 465/485 (95%)
Query: 2 APMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDE 61
AP++G+L+LQR +LV S++ G R+FSTQ A+TAS QPPPPPPPPEKTHFGGLKDE
Sbjct: 4 APIRGILTLQRMALVSRQSKKWGPGCRAFSTQAATTASASQPPPPPPPPEKTHFGGLKDE 63
Query: 62 DRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLK 121
DRIFTNLYG+HDPFLKGAMKRGDW+RTKD+VLKG+DWIVNE+KKSGLRGRGGAGFPSGLK
Sbjct: 64 DRIFTNLYGLHDPFLKGAMKRGDWYRTKDIVLKGSDWIVNEMKKSGLRGRGGAGFPSGLK 123
Query: 122 WSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYI 181
WSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+ AYIYI
Sbjct: 124 WSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATTAYIYI 183
Query: 182 RGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEG 241
RGEYVNERKNLERAR+EAY AGLLGKNAC SGYDFDVHIHYGAGAYICGEETALLESLEG
Sbjct: 184 RGEYVNERKNLERARKEAYEAGLLGKNACXSGYDFDVHIHYGAGAYICGEETALLESLEG 243
Query: 242 KQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCV 301
KQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFA FGRKNN+GTKL+CV
Sbjct: 244 KQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFAGFGRKNNAGTKLYCV 303
Query: 302 SGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 361
SGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD
Sbjct: 304 SGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 363
Query: 362 YDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 421
YDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL M+MER
Sbjct: 364 YDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLLMMMER 423
Query: 422 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAEREL 481
LKVGNA LEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AEREL
Sbjct: 424 LKVGNANLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAEREL 483
Query: 482 LEATA 486
LE A
Sbjct: 484 LEVAA 488
>gi|297810971|ref|XP_002873369.1| hypothetical protein ARALYDRAFT_487692 [Arabidopsis lyrata subsp.
lyrata]
gi|297319206|gb|EFH49628.1| hypothetical protein ARALYDRAFT_487692 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/486 (91%), Positives = 470/486 (96%)
Query: 1 MAPMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
MAP++G+L LQRA + R++ LRSFSTQ AST++TPQPPPPPPPPEKTHFGGL D
Sbjct: 1 MAPVRGILGLQRAVSIWKEINRVAPALRSFSTQAASTSTTPQPPPPPPPPEKTHFGGLTD 60
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG+HDPFLKGAMKRGDWHRTKDLVLKG DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61 EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGL 120
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNER NLE+AR+EAYAAGLLGKNACGSGYDFDV+IH+GAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERLNLEKARREAYAAGLLGKNACGSGYDFDVYIHFGAGAYICGEETALLESLE 240
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WF+SFGRKNN+GTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFC 300
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
+SGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLA+IPGGSSVPL+PK+IC+DVLM
Sbjct: 301 ISGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKNICEDVLM 360
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
D+DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480
Query: 481 LLEATA 486
LL+A A
Sbjct: 481 LLQAAA 486
>gi|307136131|gb|ADN33976.1| NADH-ubiquinone oxidoreductase flavoprotein [Cucumis melo subsp.
melo]
Length = 480
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/480 (92%), Positives = 466/480 (97%)
Query: 7 VLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFT 66
+L LQ +L R Y ++ +GLR+FS+QGA+ +PQPPPPPPPPEKTHFGGLKDEDRIFT
Sbjct: 1 MLYLQHRTLARRYIDQWGIGLRAFSSQGAAAPGSPQPPPPPPPPEKTHFGGLKDEDRIFT 60
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
NLYG+HDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 61 NLYGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 120
Query: 127 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 186
KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIYIRGEYV
Sbjct: 121 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 180
Query: 187 NERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 246
NERKNLE+AR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP
Sbjct: 181 NERKNLEKARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 240
Query: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVN 306
RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKLFCVSGHVN
Sbjct: 241 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 300
Query: 307 KPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 366
KPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK
Sbjct: 301 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 360
Query: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 426
AVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER+KVGN
Sbjct: 361 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 420
Query: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRI+E AEREL++A A
Sbjct: 421 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 480
>gi|125559373|gb|EAZ04909.1| hypothetical protein OsI_27090 [Oryza sativa Indica Group]
Length = 529
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/486 (91%), Positives = 463/486 (95%), Gaps = 1/486 (0%)
Query: 2 APMKGVLSLQRASLVRCYS-ERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
A ++ + SL RA R + L +SFSTQ A+T+STPQPPPPPPPPEKTHFG LKD
Sbjct: 44 AALEYLHSLSRAQPTRSLTGAGLYSAGKSFSTQAATTSSTPQPPPPPPPPEKTHFGDLKD 103
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG HDPFLKGAMKRGDWHRTKDLVLKGADWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 104 EDRIFTNLYGQHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGL 163
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY
Sbjct: 164 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 223
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNER NL +AR+EAYAAGLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLE
Sbjct: 224 IRGEYVNERLNLLKAREEAYAAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLE 283
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKLFC
Sbjct: 284 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 343
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
VSGHVNKPCTVEEEMSIPLKELI++HCGGVRGGWDNLLA+IPGGSSVPLLPKHICDDVLM
Sbjct: 344 VSGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAIIPGGSSVPLLPKHICDDVLM 403
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 404 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 463
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AERE
Sbjct: 464 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 523
Query: 481 LLEATA 486
LL A+A
Sbjct: 524 LLAASA 529
>gi|115473713|ref|NP_001060455.1| Os07g0645400 [Oryza sativa Japonica Group]
gi|23307584|dbj|BAC16718.1| putative NADH dehydrogenase [Oryza sativa Japonica Group]
gi|113611991|dbj|BAF22369.1| Os07g0645400 [Oryza sativa Japonica Group]
Length = 504
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/459 (95%), Positives = 452/459 (98%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
+SFSTQ A+T+STPQPPPPPPPPEKTHFG LKDEDRIFTNLYG HDPFLKGAMKRGDWHR
Sbjct: 46 KSFSTQAATTSSTPQPPPPPPPPEKTHFGDLKDEDRIFTNLYGQHDPFLKGAMKRGDWHR 105
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TKDLVLKGADWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT
Sbjct: 106 TKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 165
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNER NL +AR+EAYAAGLLGK
Sbjct: 166 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLLKAREEAYAAGLLGK 225
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN
Sbjct: 226 NACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 285
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAVSPTILRRGP+WFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI++HC
Sbjct: 286 VETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIEKHC 345
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNLLA+IPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV
Sbjct: 346 GGVRGGWDNLLAIIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 405
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI
Sbjct: 406 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 465
Query: 448 CALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
CALGDAAAWPVQGLIRHFRPELERRI+E AERELL A+A
Sbjct: 466 CALGDAAAWPVQGLIRHFRPELERRIRERAERELLAASA 504
>gi|125601292|gb|EAZ40868.1| hypothetical protein OsJ_25349 [Oryza sativa Japonica Group]
Length = 514
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/459 (95%), Positives = 452/459 (98%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
+SFSTQ A+T+STPQPPPPPPPPEKTHFG LKDEDRIFTNLYG HDPFLKGAMKRGDWHR
Sbjct: 56 KSFSTQAATTSSTPQPPPPPPPPEKTHFGDLKDEDRIFTNLYGQHDPFLKGAMKRGDWHR 115
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TKDLVLKGADWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT
Sbjct: 116 TKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 175
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNER NL +AR+EAYAAGLLGK
Sbjct: 176 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLLKAREEAYAAGLLGK 235
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN
Sbjct: 236 NACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 295
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAVSPTILRRGP+WFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI++HC
Sbjct: 296 VETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIEKHC 355
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNLLA+IPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV
Sbjct: 356 GGVRGGWDNLLAIIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 415
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI
Sbjct: 416 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 475
Query: 448 CALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
CALGDAAAWPVQGLIRHFRPELERRI+E AERELL A+A
Sbjct: 476 CALGDAAAWPVQGLIRHFRPELERRIRERAERELLAASA 514
>gi|194700414|gb|ACF84291.1| unknown [Zea mays]
gi|195621570|gb|ACG32615.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Zea mays]
gi|238010292|gb|ACR36181.1| unknown [Zea mays]
gi|414887890|tpg|DAA63904.1| TPA: NADH-ubiquinone oxidoreductase subunit [Zea mays]
Length = 504
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/486 (91%), Positives = 463/486 (95%), Gaps = 1/486 (0%)
Query: 2 APMKGVLSLQRASLVRCYS-ERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
A ++ + SL RA R + L RS STQ A+T+STPQPPPPPPPPEKTHFGGLKD
Sbjct: 19 AAIEYIHSLSRAQPARSLNGAGLCPASRSLSTQAATTSSTPQPPPPPPPPEKTHFGGLKD 78
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG+HDPFLKGAMKRGDW+RTKDLV+KGADWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 79 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVIKGADWIVNEMKKSGLRGRGGAGFPSGL 138
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY
Sbjct: 139 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 198
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNER NLE+ARQEAYAAGLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLE
Sbjct: 199 IRGEYVNERLNLEKARQEAYAAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLE 258
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKL+C
Sbjct: 259 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLYC 318
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
+SGHVNKPCTVEEEMSIPLKEL++RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 319 ISGHVNKPCTVEEEMSIPLKELLERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 378
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT WLWMIME
Sbjct: 379 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTPWLWMIME 438
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
RLKVG+AKLEEIDML EVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AERE
Sbjct: 439 RLKVGDAKLEEIDMLHEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 498
Query: 481 LLEATA 486
LL A+A
Sbjct: 499 LLAASA 504
>gi|219885535|gb|ACL53142.1| unknown [Zea mays]
gi|414591037|tpg|DAA41608.1| TPA: NADH-ubiquinone oxidoreductase subunit [Zea mays]
Length = 504
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/459 (94%), Positives = 453/459 (98%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RSFSTQ A+T+STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYG+HDPFLKGA+KRGDW+R
Sbjct: 46 RSFSTQAATTSSTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAVKRGDWYR 105
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TKDLV+KGADWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT
Sbjct: 106 TKDLVIKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 165
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREIMR DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNER NLE+ARQEAYAAGLLGK
Sbjct: 166 CKDREIMRQDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLEKARQEAYAAGLLGK 225
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN
Sbjct: 226 NACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 285
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAVSPTILRRGP+WFASFGRKNNSGTKL+C+SGHVNKPCTVEEEMSIPLKEL++RHC
Sbjct: 286 VETVAVSPTILRRGPEWFASFGRKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELLERHC 345
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV
Sbjct: 346 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 405
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
DAIARLSYFYKHESCGQCTPCREGT WLWMIMERLKVG+AKLEEIDMLQEVTKQIEGHTI
Sbjct: 406 DAIARLSYFYKHESCGQCTPCREGTPWLWMIMERLKVGDAKLEEIDMLQEVTKQIEGHTI 465
Query: 448 CALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
CALGDAAAWPVQGLIRHFRPELERRI+E AERELL A+A
Sbjct: 466 CALGDAAAWPVQGLIRHFRPELERRIRERAERELLAASA 504
>gi|226529035|ref|NP_001141093.1| uncharacterized protein LOC100273176 [Zea mays]
gi|194702602|gb|ACF85385.1| unknown [Zea mays]
Length = 504
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/486 (90%), Positives = 462/486 (95%), Gaps = 1/486 (0%)
Query: 2 APMKGVLSLQRASLVRCYS-ERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
A ++ + SL RA R + L RS STQ A+T+STPQPPPPPPPPEKTHFGGLKD
Sbjct: 19 AAIEYIHSLSRAQPARSLNGAGLCPASRSLSTQAATTSSTPQPPPPPPPPEKTHFGGLKD 78
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
EDRIFTNLYG+HDPFLKGAMKRGDW+RTKDLV+KGADWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 79 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVIKGADWIVNEMKKSGLRGRGGAGFPSGL 138
Query: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY
Sbjct: 139 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 198
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGEYVNER NLE+ARQEAYAAGLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLE
Sbjct: 199 IRGEYVNERLNLEKARQEAYAAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLE 258
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKL+C
Sbjct: 259 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLYC 318
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
+SGHVNKPCTVEEEMSIPLKEL++RHCGGVRGGWDNLLAVIP GSSVPLLPKHICDDVLM
Sbjct: 319 ISGHVNKPCTVEEEMSIPLKELLERHCGGVRGGWDNLLAVIPSGSSVPLLPKHICDDVLM 378
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT WLWMIME
Sbjct: 379 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTPWLWMIME 438
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
RLKVG+AKLEEIDML EVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AERE
Sbjct: 439 RLKVGDAKLEEIDMLHEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 498
Query: 481 LLEATA 486
LL A+A
Sbjct: 499 LLAASA 504
>gi|302791665|ref|XP_002977599.1| hypothetical protein SELMODRAFT_443575 [Selaginella moellendorffii]
gi|300154969|gb|EFJ21603.1| hypothetical protein SELMODRAFT_443575 [Selaginella moellendorffii]
Length = 483
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/430 (93%), Positives = 418/430 (97%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
E+T FGGLKDEDRIFTNLYG+HDPFLKGAM RGDWHRTKDLVLKG DWIVNE+KKSGLRG
Sbjct: 46 ERTSFGGLKDEDRIFTNLYGIHDPFLKGAMARGDWHRTKDLVLKGPDWIVNEMKKSGLRG 105
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKL+EGCLIAGV
Sbjct: 106 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLVEGCLIAGV 165
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
GMRA AAYIYIRGEYVNERKNLERA +EAYAAG +GKNACGSGYDFD+H+H+GAGAYICG
Sbjct: 166 GMRARAAYIYIRGEYVNERKNLERAVKEAYAAGYIGKNACGSGYDFDIHVHFGAGAYICG 225
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETALLESLEGKQGKPRLKPPFPAN GLYGCPTTVTNVETVAVSPTILRRGP+WFASFGR
Sbjct: 226 EETALLESLEGKQGKPRLKPPFPANVGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGR 285
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLA+IPGGSSVPLL
Sbjct: 286 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLL 345
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK ICDDVLMD+DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE
Sbjct: 346 PKKICDDVLMDFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 405
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
GTGWLW +MER+KVGNA LEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE
Sbjct: 406 GTGWLWTLMERMKVGNAYLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 465
Query: 471 RRIKEHAERE 480
RRI E A+RE
Sbjct: 466 RRILERAKRE 475
>gi|302786848|ref|XP_002975195.1| hypothetical protein SELMODRAFT_150347 [Selaginella moellendorffii]
gi|300157354|gb|EFJ23980.1| hypothetical protein SELMODRAFT_150347 [Selaginella moellendorffii]
Length = 460
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/430 (93%), Positives = 418/430 (97%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
E+T FGGLKDEDRIFTNLYG+HDPFLKGAM RGDWHRTKDLVLKG DWIVNE+KKSGLRG
Sbjct: 23 ERTSFGGLKDEDRIFTNLYGIHDPFLKGAMARGDWHRTKDLVLKGPDWIVNEMKKSGLRG 82
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKL+EGCLIAGV
Sbjct: 83 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLVEGCLIAGV 142
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
GMRA AAYIYIRGEYVNERKNLERA +EAYAAG +GKNACGSGYDFD+H+H+GAGAYICG
Sbjct: 143 GMRARAAYIYIRGEYVNERKNLERAVKEAYAAGYIGKNACGSGYDFDIHVHFGAGAYICG 202
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETALLESLEGKQGKPRLKPPFPAN GLYGCPTTVTNVETVAVSPTILRRGP+WFASFGR
Sbjct: 203 EETALLESLEGKQGKPRLKPPFPANVGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGR 262
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLA+IPGGSSVPLL
Sbjct: 263 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLL 322
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK ICDDVLMD+DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE
Sbjct: 323 PKKICDDVLMDFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 382
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
GTGWLW +MER+KVGNA LEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE
Sbjct: 383 GTGWLWTLMERMKVGNAYLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 442
Query: 471 RRIKEHAERE 480
RRI E A+RE
Sbjct: 443 RRILERAKRE 452
>gi|168003423|ref|XP_001754412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694514|gb|EDQ80862.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 462
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/430 (92%), Positives = 412/430 (95%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
EKTHFGGLKDEDRIFTNLYG+HDPFL GA KRGDW+RTKDLV KG DWIVNEVKKSGLRG
Sbjct: 24 EKTHFGGLKDEDRIFTNLYGLHDPFLAGAKKRGDWYRTKDLVHKGTDWIVNEVKKSGLRG 83
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV
Sbjct: 84 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 143
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
GMRA AAYIYIRGEYVNER NL++A E Y GLLGKNAC +GYDFDV+IHYGAGAYICG
Sbjct: 144 GMRARAAYIYIRGEYVNERLNLQKALHECYKEGLLGKNACSTGYDFDVYIHYGAGAYICG 203
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WF+SFGR
Sbjct: 204 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGR 263
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLA+IPGGSSVPLL
Sbjct: 264 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLL 323
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PKHICDDVLMD+DALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE
Sbjct: 324 PKHICDDVLMDFDALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 383
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G+ WLW +MERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE
Sbjct: 384 GSPWLWTMMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 443
Query: 471 RRIKEHAERE 480
RRI E A RE
Sbjct: 444 RRILERAARE 453
>gi|168052872|ref|XP_001778863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669732|gb|EDQ56313.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/431 (92%), Positives = 414/431 (96%), Gaps = 1/431 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
EKT FGGLKDEDRIFTNLYG+HDPFL GA KRGDWHRTKDLVLKG DWIVNE+KKSGLRG
Sbjct: 24 EKTQFGGLKDEDRIFTNLYGIHDPFLAGAKKRGDWHRTKDLVLKGTDWIVNEMKKSGLRG 83
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV
Sbjct: 84 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 143
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAG-LLGKNACGSGYDFDVHIHYGAGAYIC 229
GMRA AAYIYIRGEYVNER NL++A E Y G LLGKNACGSGYDFDV+IHYGAGAYIC
Sbjct: 144 GMRARAAYIYIRGEYVNERLNLQKALHECYKEGSLLGKNACGSGYDFDVYIHYGAGAYIC 203
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WF+SFG
Sbjct: 204 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFG 263
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLA+IPGGSSVPL
Sbjct: 264 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPL 323
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
LPK+ICDDVLMD+DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR
Sbjct: 324 LPKNICDDVLMDFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 383
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ WLW +MERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL
Sbjct: 384 EGSPWLWTMMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 443
Query: 470 ERRIKEHAERE 480
ERRI E A +E
Sbjct: 444 ERRILERAAKE 454
>gi|190895712|gb|ACE96369.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895718|gb|ACE96372.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895748|gb|ACE96387.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895754|gb|ACE96390.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895758|gb|ACE96392.1| esterase/lipase/thioesterase [Populus tremula]
Length = 408
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/408 (97%), Positives = 403/408 (98%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FGGLKDEDRIFTN+YG+HDPF KGAMKRGDW+RTKDLVLKG DWIVNEVKKSGLRGRGGA
Sbjct: 1 FGGLKDEDRIFTNVYGLHDPFFKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGA 60
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK+SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA
Sbjct: 61 GFPSGLKWSFMPKISDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 120
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
SAAYIYIRGEYVNER NLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETA
Sbjct: 121 SAAYIYIRGEYVNERINLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 180
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNS
Sbjct: 181 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNS 240
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHI
Sbjct: 241 GTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 300
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDVLMDYDALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 301 CDDVLMDYDALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 360
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI
Sbjct: 361 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 408
>gi|190895700|gb|ACE96363.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895702|gb|ACE96364.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895708|gb|ACE96367.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895710|gb|ACE96368.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895714|gb|ACE96370.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895716|gb|ACE96371.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895720|gb|ACE96373.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895722|gb|ACE96374.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895724|gb|ACE96375.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895726|gb|ACE96376.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895728|gb|ACE96377.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895730|gb|ACE96378.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895732|gb|ACE96379.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895734|gb|ACE96380.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895736|gb|ACE96381.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895738|gb|ACE96382.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895740|gb|ACE96383.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895742|gb|ACE96384.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895744|gb|ACE96385.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895746|gb|ACE96386.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895752|gb|ACE96389.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895756|gb|ACE96391.1| esterase/lipase/thioesterase [Populus tremula]
Length = 408
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/408 (97%), Positives = 402/408 (98%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FGGLKDEDRIFTN+YG+HDPF KGAMKRGDW+RTKDLVLKG DWIVNEVKKSGLRGRGGA
Sbjct: 1 FGGLKDEDRIFTNVYGLHDPFFKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGA 60
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA
Sbjct: 61 GFPSGLKWSFMPKTSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 120
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
SAAYIYIRGEYVNER NLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETA
Sbjct: 121 SAAYIYIRGEYVNERINLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 180
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNS
Sbjct: 181 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNS 240
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHI
Sbjct: 241 GTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 300
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDVLMDYDALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 301 CDDVLMDYDALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 360
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI
Sbjct: 361 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 408
>gi|190895704|gb|ACE96365.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895706|gb|ACE96366.1| esterase/lipase/thioesterase [Populus tremula]
Length = 408
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/408 (96%), Positives = 401/408 (98%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FGGLKDEDRIFTN+YG+HDPF KGAMKRGDW+RTKDLVLKG DWIVNEVKKSGLRGRGGA
Sbjct: 1 FGGLKDEDRIFTNVYGLHDPFFKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGA 60
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA
Sbjct: 61 GFPSGLKWSFMPKTSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 120
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
SAAYIYIRGEYVNER NLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETA
Sbjct: 121 SAAYIYIRGEYVNERINLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 180
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLE KQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNS
Sbjct: 181 LLESLEVKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNS 240
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHI
Sbjct: 241 GTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 300
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDVLMDYDALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 301 CDDVLMDYDALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 360
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI
Sbjct: 361 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 408
>gi|190895750|gb|ACE96388.1| esterase/lipase/thioesterase [Populus tremula]
Length = 408
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/408 (96%), Positives = 401/408 (98%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FGGLKDEDRIFTN+YG+HDPF KGAMKRGDW+RTKDLVLKG DWIVNEVKKSGLRGRGGA
Sbjct: 1 FGGLKDEDRIFTNVYGLHDPFFKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGA 60
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA
Sbjct: 61 GFPSGLKWSFMPKTSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 120
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
SAAYIYIRGEYVNER NLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETA
Sbjct: 121 SAAYIYIRGEYVNERINLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 180
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNS
Sbjct: 181 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNS 240
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHI
Sbjct: 241 GTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 300
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDVLMDYDALKAV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 301 CDDVLMDYDALKAVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 360
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA PVQGLI
Sbjct: 361 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAARPVQGLI 408
>gi|414591038|tpg|DAA41609.1| TPA: NADH-ubiquinone oxidoreductase subunit, mRNA [Zea mays]
Length = 468
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/423 (95%), Positives = 417/423 (98%)
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWS 123
FTNLYG+HDPFLKGA+KRGDW+RTKDLV+KGADWIVNE+KKSGLRGRGGAGFPSGLKWS
Sbjct: 46 FFTNLYGLHDPFLKGAVKRGDWYRTKDLVIKGADWIVNEMKKSGLRGRGGAGFPSGLKWS 105
Query: 124 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 183
FMPKVSDGRPSYLVVNADESEPGTCKDREIMR DPHKLLEGCLIAGVGMRASAAYIYIRG
Sbjct: 106 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRQDPHKLLEGCLIAGVGMRASAAYIYIRG 165
Query: 184 EYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 243
EYVNER NLE+ARQEAYAAGLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQ
Sbjct: 166 EYVNERLNLEKARQEAYAAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQ 225
Query: 244 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSG 303
GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKL+C+SG
Sbjct: 226 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLYCISG 285
Query: 304 HVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 363
HVNKPCTVEEEMSIPLKEL++RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD
Sbjct: 286 HVNKPCTVEEEMSIPLKELLERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 345
Query: 364 ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 423
ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT WLWMIMERLK
Sbjct: 346 ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTPWLWMIMERLK 405
Query: 424 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLE 483
VG+AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI+E AERELL
Sbjct: 406 VGDAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERELLA 465
Query: 484 ATA 486
A+A
Sbjct: 466 ASA 468
>gi|190895760|gb|ACE96393.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895774|gb|ACE96400.1| esterase/lipase/thioesterase [Populus tremula]
Length = 396
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/396 (96%), Positives = 391/396 (98%)
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
N+YG+HDPF KGAMKRGDW+RTKDLVLKG DWIVNEVKKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 1 NVYGLHDPFFKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 60
Query: 127 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 186
K+SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV
Sbjct: 61 KISDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 120
Query: 187 NERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 246
NER NLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP
Sbjct: 121 NERINLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 180
Query: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVN 306
RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKLFCVSGHVN
Sbjct: 181 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 240
Query: 307 KPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 366
KPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK
Sbjct: 241 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 300
Query: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 426
AV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN
Sbjct: 301 AVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 360
Query: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI
Sbjct: 361 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 396
>gi|190895762|gb|ACE96394.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895772|gb|ACE96399.1| esterase/lipase/thioesterase [Populus tremula]
Length = 396
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/396 (96%), Positives = 390/396 (98%)
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
N+YG+HDPF KGAMKRGDW+RTKDLVLKG DWIVNEVKKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 1 NVYGLHDPFFKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 60
Query: 127 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 186
K SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV
Sbjct: 61 KASDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 120
Query: 187 NERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 246
NER NLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP
Sbjct: 121 NERINLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 180
Query: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVN 306
RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKLFCVSGHVN
Sbjct: 181 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 240
Query: 307 KPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 366
KPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK
Sbjct: 241 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 300
Query: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 426
AV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN
Sbjct: 301 AVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 360
Query: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI
Sbjct: 361 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 396
>gi|190895764|gb|ACE96395.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895766|gb|ACE96396.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895768|gb|ACE96397.1| esterase/lipase/thioesterase [Populus tremula]
gi|190895770|gb|ACE96398.1| esterase/lipase/thioesterase [Populus tremula]
Length = 396
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/396 (96%), Positives = 390/396 (98%)
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
N+YG+HDPF KGAMKRGDW+RTKDLVLKG DWIVNEVKKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 1 NVYGLHDPFFKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 60
Query: 127 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 186
K SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV
Sbjct: 61 KTSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 120
Query: 187 NERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 246
NER NLERAR+EAY AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP
Sbjct: 121 NERINLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 180
Query: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVN 306
RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRKNNSGTKLFCVSGHVN
Sbjct: 181 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 240
Query: 307 KPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 366
KPCTVEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK
Sbjct: 241 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 300
Query: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 426
AV SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN
Sbjct: 301 AVTSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 360
Query: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI
Sbjct: 361 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 396
>gi|303278834|ref|XP_003058710.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459870|gb|EEH57165.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 468
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/429 (86%), Positives = 400/429 (93%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
GGLKDEDRIFTNLYG HDPFLKGAMKRGDW+ TKDL+L G DWIVNE+K SGLRGRGGAG
Sbjct: 40 GGLKDEDRIFTNLYGKHDPFLKGAMKRGDWYNTKDLMLMGPDWIVNEIKASGLRGRGGAG 99
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
FPSGLKWSFMPKVSDGRPSYLV+NADESEPGTCKDREIMRHDPHKLLEGCLIAG MRA
Sbjct: 100 FPSGLKWSFMPKVSDGRPSYLVINADESEPGTCKDREIMRHDPHKLLEGCLIAGTAMRAR 159
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A YIYIRGEYVNER NLERAR EAYAAG LGKNACGSG DFD++IHYGAGAYICGEETAL
Sbjct: 160 ACYIYIRGEYVNERLNLERARDEAYAAGYLGKNACGSGIDFDINIHYGAGAYICGEETAL 219
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
+ESLEGKQGKPRLKPPFPA GLYGCPTTVTNVETVAV+PTILRRG +WF+SFGRKNN+G
Sbjct: 220 IESLEGKQGKPRLKPPFPAGVGLYGCPTTVTNVETVAVAPTILRRGAEWFSSFGRKNNAG 279
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKLFC+SGHVNKPCTVEEEMSIPLKELI++HCGGVRGGWDNLLA+IPGGSSVPL+PK IC
Sbjct: 280 TKLFCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAIIPGGSSVPLIPKKIC 339
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
++VLMD+D+LK+ QSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL
Sbjct: 340 EEVLMDFDSLKSAQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 399
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+ +MER+K G+A+LEEIDMLQE+TKQIEGHTICALGDAAAWPVQGLIRHFRPELE RI
Sbjct: 400 YNVMERMKKGDARLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIRHFRPELEARINA 459
Query: 476 HAERELLEA 484
E + A
Sbjct: 460 QPSAEQIAA 468
>gi|412986444|emb|CCO14870.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Bathycoccus
prasinos]
Length = 512
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/451 (83%), Positives = 412/451 (91%), Gaps = 3/451 (0%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
S+ +F + ST S+ + P P +TH GGL D+DRIFTNLYG HDPF+KGAMKRG
Sbjct: 53 SMTTTTFRAKSISTTSSTRNTDSPHLP-RTH-GGLTDQDRIFTNLYGKHDPFIKGAMKRG 110
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADE 142
DW+ TK+LVL GADWI+NE+K SGLRGRGGAGFPSGLKWSFMPKVS DGRP+YLVVNADE
Sbjct: 111 DWYNTKELVLMGADWIINEIKASGLRGRGGAGFPSGLKWSFMPKVSADGRPNYLVVNADE 170
Query: 143 SEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAA 202
SEPGTCKDREIMRHDPHKLLEGCL+AGVGMRA A YIYIRGEYVNER LERAR EAYAA
Sbjct: 171 SEPGTCKDREIMRHDPHKLLEGCLLAGVGMRARACYIYIRGEYVNERLALERARDEAYAA 230
Query: 203 GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP 262
G LGKNACG+G DFDV+IHYGAGAYICGEETAL+ESLEGKQGKPRLKPPFPAN GLYGCP
Sbjct: 231 GYLGKNACGTGIDFDVNIHYGAGAYICGEETALIESLEGKQGKPRLKPPFPANIGLYGCP 290
Query: 263 TTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKEL 322
TTVTNVETVAV+PTILRRG DWFA FGRKNN+GTKLFC+SGHVN PCTVEEEMSIPL+EL
Sbjct: 291 TTVTNVETVAVAPTILRRGSDWFAGFGRKNNTGTKLFCISGHVNNPCTVEEEMSIPLQEL 350
Query: 323 IDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDK 382
I++HCGGVRGGWDNLLA+IPGGSSVPL+PK +C++VLMD+D+LKA QSGLGTAAVIVMDK
Sbjct: 351 IEKHCGGVRGGWDNLLAIIPGGSSVPLIPKKVCEEVLMDFDSLKAAQSGLGTAAVIVMDK 410
Query: 383 STDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI 442
STDVVDAIARLSYFYKHESCGQCTPCREGTGWL+ +MER+K G+AKLEEIDMLQE+TKQI
Sbjct: 411 STDVVDAIARLSYFYKHESCGQCTPCREGTGWLYNVMERMKKGDAKLEEIDMLQELTKQI 470
Query: 443 EGHTICALGDAAAWPVQGLIRHFRPELERRI 473
EGHTICALGDAAAWPVQGLIRHFRPELE RI
Sbjct: 471 EGHTICALGDAAAWPVQGLIRHFRPELEARI 501
>gi|255078918|ref|XP_002503039.1| predicted protein [Micromonas sp. RCC299]
gi|226518305|gb|ACO64297.1| predicted protein [Micromonas sp. RCC299]
Length = 441
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/433 (85%), Positives = 400/433 (92%), Gaps = 1/433 (0%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
+TH GGL DEDRIFTNLYG HDPFLKGAMKRGDW+ TK+L+L G DWIVNE+K SGLRGR
Sbjct: 10 RTH-GGLSDEDRIFTNLYGKHDPFLKGAMKRGDWYNTKELMLMGPDWIVNEMKASGLRGR 68
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFPSGLKWSFMPKVSDGRPSYLV+NADESEPGTCKDREIMRHDPHKLLEGCLIAG
Sbjct: 69 GGAGFPSGLKWSFMPKVSDGRPSYLVINADESEPGTCKDREIMRHDPHKLLEGCLIAGTA 128
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
MRA A YIYIRGEYVNER L +AR EAYAAG LGKNACGSG DFD++IHYGAGAYICGE
Sbjct: 129 MRARACYIYIRGEYVNERLALMKARDEAYAAGYLGKNACGSGIDFDINIHYGAGAYICGE 188
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA GLYGCPTTVTNVETVAV+PTILRRG DWFASFGRK
Sbjct: 189 ETALIESLEGKQGKPRLKPPFPAGVGLYGCPTTVTNVETVAVAPTILRRGADWFASFGRK 248
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NN+GTKLFC+SGHVNKPCTVEEEMSIPLK+LI++HCGGVRGGWDNLLA+IPGGSSVPL+P
Sbjct: 249 NNAGTKLFCISGHVNKPCTVEEEMSIPLKDLIEKHCGGVRGGWDNLLAIIPGGSSVPLIP 308
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +C++VLMD+D+LK+ QSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG
Sbjct: 309 KSVCEEVLMDFDSLKSAQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 368
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
TGWL+ IMER+K G+A+LEEIDMLQE+TKQIEGHTICALGDAAAWPVQGLIRHFRPELE
Sbjct: 369 TGWLYAIMERMKKGDARLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIRHFRPELEA 428
Query: 472 RIKEHAERELLEA 484
RI E + A
Sbjct: 429 RINAQPTSEQIAA 441
>gi|384252565|gb|EIE26041.1| NADH-ubiquinone oxidoreductase [Coccomyxa subellipsoidea C-169]
Length = 467
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/453 (82%), Positives = 404/453 (89%), Gaps = 6/453 (1%)
Query: 27 LRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWH 86
LRSFS Q + TP P EKT +GGL+DEDRIFTNLY DPF+KGAM RGDW+
Sbjct: 18 LRSFSAQASPPPPTPPPS------EKTTYGGLRDEDRIFTNLYRQGDPFIKGAMARGDWY 71
Query: 87 RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPG 146
RTKDLV KG+DWIV E+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPG
Sbjct: 72 RTKDLVEKGSDWIVGEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPG 131
Query: 147 TCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLG 206
TCKDREIMRHDPHKL+EGCLIAGVGMRA A YIYIRGEY NER LERA EAYA G LG
Sbjct: 132 TCKDREIMRHDPHKLIEGCLIAGVGMRARAGYIYIRGEYYNERLALERALSEAYAKGFLG 191
Query: 207 KNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVT 266
KNACGSGYDFD+++ YGAGAYICGEETAL+ESLEGKQGKPRLKPPFPAN GLYGCPTTVT
Sbjct: 192 KNACGSGYDFDLNVAYGAGAYICGEETALIESLEGKQGKPRLKPPFPANVGLYGCPTTVT 251
Query: 267 NVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRH 326
NVETVAV+PTILRRGP+WFASFGRKNN+GTKLFC+SGHVN PCTVEEE+SIPL+ELI+RH
Sbjct: 252 NVETVAVAPTILRRGPEWFASFGRKNNAGTKLFCISGHVNTPCTVEEELSIPLRELIERH 311
Query: 327 CGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDV 386
GGVRGGWDNLLA+IPGGSSVP LPK ICDDVLMD+DALK QSGLGTAAVIVMDKSTD+
Sbjct: 312 AGGVRGGWDNLLAIIPGGSSVPCLPKRICDDVLMDFDALKEAQSGLGTAAVIVMDKSTDI 371
Query: 387 VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT 446
+DAIARLSYFYKHESCGQCTPCREG WL+ IM R+K G+A+LEEIDML EVTKQIEGHT
Sbjct: 372 IDAIARLSYFYKHESCGQCTPCREGAPWLYDIMTRMKKGDARLEEIDMLWEVTKQIEGHT 431
Query: 447 ICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
ICALGDAAAWPVQGLIRHFRPE+E RI E+
Sbjct: 432 ICALGDAAAWPVQGLIRHFRPEMEERIGRFCEQ 464
>gi|145354210|ref|XP_001421384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581621|gb|ABO99677.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 449
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/427 (84%), Positives = 394/427 (92%), Gaps = 1/427 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
E+ H G LKD+DRIFTNLYG HDPFLKGAMKRGDWH TK LV GADWI++E+K SGLRG
Sbjct: 15 ERAH-GDLKDQDRIFTNLYGKHDPFLKGAMKRGDWHNTKSLVELGADWIISEMKASGLRG 73
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFPSGLKWSFMP+VSDGRP+YLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG
Sbjct: 74 RGGAGFPSGLKWSFMPRVSDGRPNYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGT 133
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
MRA AAYIYIRGEYVNER LERA E YAAG LGKNACGSG DFDV+IHYGAGAYICG
Sbjct: 134 AMRARAAYIYIRGEYVNERLALERALAECYAAGYLGKNACGSGMDFDVNIHYGAGAYICG 193
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ESLEGKQGKPRLKPPFPAN GLYGCPTTVTNVETVAV+PTILRRG DWFASFGR
Sbjct: 194 EETALIESLEGKQGKPRLKPPFPANVGLYGCPTTVTNVETVAVAPTILRRGADWFASFGR 253
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
KNN+GTKLFC+SGHVN PCTVEEEMSIPL++LI++HCGGVRGGWDNLLAVIPGGSSVPL+
Sbjct: 254 KNNAGTKLFCISGHVNNPCTVEEEMSIPLRDLIEKHCGGVRGGWDNLLAVIPGGSSVPLI 313
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK++C+DVLMD+D+LK QSGLGTAAVIVMDKSTDV+DAIARLSYFYKHESCGQCTPCRE
Sbjct: 314 PKNVCEDVLMDFDSLKEAQSGLGTAAVIVMDKSTDVIDAIARLSYFYKHESCGQCTPCRE 373
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
GT WL+ IM+R+ G+A+LEEID LQE+TKQIEGHTICALGDAAAWP+QG+IRHFRP LE
Sbjct: 374 GTSWLYNIMQRMVKGDARLEEIDTLQELTKQIEGHTICALGDAAAWPIQGVIRHFRPLLE 433
Query: 471 RRIKEHA 477
RI + +
Sbjct: 434 ERISQFS 440
>gi|308811771|ref|XP_003083193.1| PREDICTED P0503D09.102 gene product [Oryza sativa (ISS)
[Ostreococcus tauri]
gi|116055072|emb|CAL57468.1| PREDICTED P0503D09.102 gene product [Oryza sativa (ISS)
[Ostreococcus tauri]
Length = 491
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/482 (77%), Positives = 413/482 (85%), Gaps = 6/482 (1%)
Query: 7 VLSLQRASLVRCYSERLSVGLRSFSTQGAST--ASTP--QPPPPPPPPEKTHFGGLKDED 62
LS + R ++LS +R+F + S A TP + PE+TH G L D D
Sbjct: 12 TLSTANRVVARENGDKLS-AIRTFRSSEISKIRALTPVSRAYASVEAPERTH-GNLSDAD 69
Query: 63 RIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKW 122
RIFTNLYG HDPFLKGAM RGDW+ TK LV GADWIVNE+K SGLRGRGGAGFPSGLKW
Sbjct: 70 RIFTNLYGRHDPFLKGAMARGDWYETKKLVELGADWIVNEMKASGLRGRGGAGFPSGLKW 129
Query: 123 SFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIR 182
SFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG MRA AAYIYIR
Sbjct: 130 SFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGTAMRARAAYIYIR 189
Query: 183 GEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGK 242
GEYVNER LERA EAYAAG LGK+ACG+G DFDV+IHYGAGAYICGEETAL+ESLEGK
Sbjct: 190 GEYVNERLALERALAEAYAAGFLGKDACGTGLDFDVNIHYGAGAYICGEETALIESLEGK 249
Query: 243 QGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVS 302
QGKPRLKPPFPAN GLYGCPTTVTNVETVAV+PTILRRGP+WFASFGRKNN+GTKLFC+S
Sbjct: 250 QGKPRLKPPFPANVGLYGCPTTVTNVETVAVAPTILRRGPEWFASFGRKNNAGTKLFCIS 309
Query: 303 GHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDY 362
GHVN PCTVEEEMSIPLK+LI++HCGGVRGGWDNLLAVIPGGSSVP++ K +CDDVLMD+
Sbjct: 310 GHVNNPCTVEEEMSIPLKDLIEKHCGGVRGGWDNLLAVIPGGSSVPMITKDVCDDVLMDF 369
Query: 363 DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERL 422
DALK V SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT W++ IM+RL
Sbjct: 370 DALKGVGSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTSWIYNIMKRL 429
Query: 423 KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELL 482
G+A+LEE++MLQE+TKQIEGHTICALGDAAAWPVQGL+++F P + RI ++ + +
Sbjct: 430 VKGDARLEEVEMLQEITKQIEGHTICALGDAAAWPVQGLLKNFSPLIRERITASSDAKKI 489
Query: 483 EA 484
A
Sbjct: 490 AA 491
>gi|302833609|ref|XP_002948368.1| NADH:ubiquinone oxidoreductase 51 kDa subunit [Volvox carteri f.
nagariensis]
gi|300266588|gb|EFJ50775.1| NADH:ubiquinone oxidoreductase 51 kDa subunit [Volvox carteri f.
nagariensis]
Length = 489
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/482 (78%), Positives = 416/482 (86%), Gaps = 2/482 (0%)
Query: 7 VLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFT 66
V L L E + LR+FSTQ + + PPPPPPPP KT FGGLKD+DRIF
Sbjct: 8 VAQLASVQLTGALQELKTGVLRAFSTQAPAAGNVAAPPPPPPPPAKTSFGGLKDDDRIFQ 67
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
N+YG HD +KGAM RGDW+ TK+LVLKG DWI++++KKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 68 NIYGRHDTSIKGAMSRGDWYMTKELVLKGRDWIIDQMKKSGLRGRGGAGFPSGLKWSFMP 127
Query: 127 KV--SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGE 184
K SDGRPSYLVVN DESEPGTCKDREIMRH+PHKL+EGCLIAGV M A A YIYIRGE
Sbjct: 128 KAMASDGRPSYLVVNGDESEPGTCKDREIMRHEPHKLVEGCLIAGVAMGARAGYIYIRGE 187
Query: 185 YVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQG 244
+VNER+++ RA EAYA G LGKNACGSG DFD+ +HYGAGAYICGEETAL+ESLEGKQG
Sbjct: 188 FVNERRSVMRAIDEAYAKGFLGKNACGSGVDFDLMVHYGAGAYICGEETALIESLEGKQG 247
Query: 245 KPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGH 304
KPRLKPPFPA GLYGCPTTVTNVETVAVSPTILRRGP+WF+SFGRKNN+GTKLFC+SGH
Sbjct: 248 KPRLKPPFPAGVGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFCISGH 307
Query: 305 VNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDA 364
VN+PCTVEEEMSIPLKELI+RH GGVRGGWDNLLA+IPGGSSVPLL K +CD VLMD+DA
Sbjct: 308 VNRPCTVEEEMSIPLKELIERHAGGVRGGWDNLLAIIPGGSSVPLLTKKLCDTVLMDFDA 367
Query: 365 LKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKV 424
LK QSGLGTAAVIVMDKSTDV+DAIARLSYFYKHESCGQCTPCREGTGWL+ IM R+K
Sbjct: 368 LKEAQSGLGTAAVIVMDKSTDVIDAIARLSYFYKHESCGQCTPCREGTGWLYDIMTRMKK 427
Query: 425 GNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEA 484
G+A+LEEIDML E+TKQIEGHTICALGDAAAWPVQGLIRHFR E+E RIK RE + A
Sbjct: 428 GDARLEEIDMLWEITKQIEGHTICALGDAAAWPVQGLIRHFRHEMEDRIKNAGAREKIAA 487
Query: 485 TA 486
TA
Sbjct: 488 TA 489
>gi|159489210|ref|XP_001702590.1| NADH:ubiquinone oxidoreductase 51 kDa subunit [Chlamydomonas
reinhardtii]
gi|158280612|gb|EDP06369.1| NADH:ubiquinone oxidoreductase 51 kDa subunit [Chlamydomonas
reinhardtii]
Length = 484
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/435 (81%), Positives = 392/435 (90%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
KT FGGLKDEDRIF N+YG HD +KGAM RGDW+ TK+++ KG DWI++++KKSGLRGR
Sbjct: 50 KTSFGGLKDEDRIFQNIYGRHDLSIKGAMSRGDWYMTKEIIGKGRDWIIDQMKKSGLRGR 109
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFPSGLKWSFMPK SDGRPSYLVVN DESEPGTCKDREIMRH+PHKL+EGCL+AGV
Sbjct: 110 GGAGFPSGLKWSFMPKASDGRPSYLVVNGDESEPGTCKDREIMRHEPHKLVEGCLMAGVA 169
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A A YIYIRGE+V ER+ +ERA EAYA G LGKNACGSG DFD+ +HYGAGAYICGE
Sbjct: 170 MGARAGYIYIRGEFVQERRAVERAISEAYAKGFLGKNACGSGVDFDLMVHYGAGAYICGE 229
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA GLYGCPTTVTNVETVAVSPTILRRGP+WF+SFGRK
Sbjct: 230 ETALIESLEGKQGKPRLKPPFPAGVGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRK 289
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NN+GTKLFC+SGHVN+P TVEEEMSIPLKELI+RH GGVRGGWDNLLA+IPGGSSVPLLP
Sbjct: 290 NNAGTKLFCISGHVNRPVTVEEEMSIPLKELIERHAGGVRGGWDNLLAIIPGGSSVPLLP 349
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K ICD VLMD+DALK QSGLGTAAVIVMDKSTDV+DAIARLSYFYKHESCGQCTPCREG
Sbjct: 350 KKICDGVLMDFDALKEAQSGLGTAAVIVMDKSTDVIDAIARLSYFYKHESCGQCTPCREG 409
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
TGWL+ IM R+K G+A+LEEIDML E+TKQIEGHTICALGDAAAWPVQGLIRHFR E+E
Sbjct: 410 TGWLYDIMTRMKKGDARLEEIDMLWEITKQIEGHTICALGDAAAWPVQGLIRHFRGEMEE 469
Query: 472 RIKEHAERELLEATA 486
RIK ++ L ATA
Sbjct: 470 RIKSAGGKKKLAATA 484
>gi|34328784|gb|AAQ63696.1| NADH:ubiquinone oxidoreductase 51 kD subunit [Chlamydomonas
reinhardtii]
Length = 484
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/480 (77%), Positives = 410/480 (85%), Gaps = 3/480 (0%)
Query: 7 VLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFT 66
V L A L E + LR+FST + + P PPPPP KT FGGLKDEDRIF
Sbjct: 8 VSQLAGAQLTGALQELKTGVLRAFSTAAPAAGAPPPPPPPP---AKTSFGGLKDEDRIFQ 64
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
N+YG HD +KGAM RGDW+ TK+++ KG DWI++++KKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 65 NIYGRHDLSIKGAMSRGDWYMTKEIIGKGRDWIIDQMKKSGLRGRGGAGFPSGLKWSFMP 124
Query: 127 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 186
K SD RP YLVVN DESEPGTCKDREIMRH+PHKL+EGCL+AGV M A A YIYIRGE+V
Sbjct: 125 KASDSRPIYLVVNGDESEPGTCKDREIMRHEPHKLVEGCLMAGVAMGARAGYIYIRGEFV 184
Query: 187 NERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 246
ER+ +ERA EAYA G LGKNACGSG DFD+ +HYGAGAYICGEETAL+ESLEGKQGKP
Sbjct: 185 QERRAVERAISEAYAKGFLGKNACGSGVDFDLMVHYGAGAYICGEETALIESLEGKQGKP 244
Query: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVN 306
RLKPPFPA GLYGCPTTVTNVETVAVSPTILRRGP+WF+SFGRKNN+GTKLFC+SGHVN
Sbjct: 245 RLKPPFPAGVGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFCISGHVN 304
Query: 307 KPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 366
+P TVEEEMSIPLKELI+RH GGVRGGWDNLLA+IPGGSSVPLLPK ICD VLMD+DALK
Sbjct: 305 RPVTVEEEMSIPLKELIERHAGGVRGGWDNLLAIIPGGSSVPLLPKKICDGVLMDFDALK 364
Query: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 426
QSGLGTAAVIVMDKSTDV+DAIARLSYFYKHESCGQCTPCREGTGWL+ IM R+K G+
Sbjct: 365 EAQSGLGTAAVIVMDKSTDVIDAIARLSYFYKHESCGQCTPCREGTGWLYDIMTRMKKGD 424
Query: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
A+LEEIDML E+TKQIEGHTICALGDAAAWPVQGLIRHFR E+E RIK ++ L ATA
Sbjct: 425 ARLEEIDMLWEITKQIEGHTICALGDAAAWPVQGLIRHFRGEMEERIKSAGGKKKLAATA 484
>gi|307105658|gb|EFN53906.1| NADH:ubiquinone oxidoreductase 51 kD subunit, partial [Chlorella
variabilis]
Length = 444
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/416 (83%), Positives = 385/416 (92%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
E+T FGGL D+DRIFTN+YG HDPF+KGA KRGDW+RTKD+V KG+DW+V+++KKSGLRG
Sbjct: 1 ERTTFGGLADKDRIFTNIYGRHDPFIKGAEKRGDWYRTKDIVSKGSDWVVDQMKKSGLRG 60
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFPSGLKWSFMPKVSDGRPSYLVVN DESEPGTCKDREIMRH+PHKL+EGCLIAGV
Sbjct: 61 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNGDESEPGTCKDREIMRHEPHKLVEGCLIAGV 120
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
GMRA A YIYIRGE+V ERK + RA EAYA G LG+NACGSGYDFD+++H+GAGAYICG
Sbjct: 121 GMRARAGYIYIRGEFVEERKAVMRAIDEAYAKGYLGRNACGSGYDFDLNVHWGAGAYICG 180
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ESLEGKQGKPRLKPPFPAN GLYGCPTTVTNVETVAVSPTILRRGP+WFA FGR
Sbjct: 181 EETALIESLEGKQGKPRLKPPFPANVGLYGCPTTVTNVETVAVSPTILRRGPEWFAGFGR 240
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
KNN GTKLF +SGHVN+P TVEEEMSI LKELI+RH GGVRGGWDNLLA+IPGGSSVP+L
Sbjct: 241 KNNHGTKLFAISGHVNRPVTVEEEMSISLKELIERHAGGVRGGWDNLLAIIPGGSSVPML 300
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK C+DVLMD+DALK QSGLGTAAV+VMDKSTD ++AIARLSYFYKHESCGQCTPCRE
Sbjct: 301 PKAQCEDVLMDFDALKERQSGLGTAAVMVMDKSTDPIEAIARLSYFYKHESCGQCTPCRE 360
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
GTGWL+ IM R+K G+A++EEIDML E+TKQIEGHTICALGDAAAWPVQGLIRHFR
Sbjct: 361 GTGWLYDIMTRMKKGDARVEEIDMLWELTKQIEGHTICALGDAAAWPVQGLIRHFR 416
>gi|452819233|gb|EME26298.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Galdieria
sulphuraria]
Length = 491
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/447 (79%), Positives = 388/447 (86%), Gaps = 6/447 (1%)
Query: 27 LRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWH 86
LR F+T+ P+ + FGGL+D+DRIFTNLYG D +KGA KRGDW+
Sbjct: 26 LRGFATE------APKKETWRASNAEKSFGGLQDKDRIFTNLYGELDWTIKGAEKRGDWY 79
Query: 87 RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPG 146
TKDLVLKG DW++NE+K SGLRGRGGAGFPSGLK+SFMPKVSDGRP+YLVVNADESEPG
Sbjct: 80 ATKDLVLKGRDWLINEIKASGLRGRGGAGFPSGLKYSFMPKVSDGRPNYLVVNADESEPG 139
Query: 147 TCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLG 206
TCKDREIMR+DPHKL+EGCL+ G M A AAYIYIRGEYV+ERK LE A EAY G LG
Sbjct: 140 TCKDREIMRNDPHKLVEGCLLVGRAMGARAAYIYIRGEYVHERKRLEHAVSEAYQKGYLG 199
Query: 207 KNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVT 266
KNAC +GYDFDV++HYGAGAYICGEETALLESLEGKQGKPRLKPPFPAN GLYGCP+TVT
Sbjct: 200 KNACLTGYDFDVYVHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANIGLYGCPSTVT 259
Query: 267 NVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRH 326
NVETV+V PTILRRGP WFASFGRK N+GTKLFC+SGHVN P TVEEEMSI LKELI+RH
Sbjct: 260 NVETVSVVPTILRRGPSWFASFGRKGNAGTKLFCISGHVNSPTTVEEEMSISLKELIERH 319
Query: 327 CGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDV 386
GGVRGGWDNLLAVIPGGSSVPL+PK ICDDV+MD+DALK VQSGLGTAAVIVMDKSTD+
Sbjct: 320 AGGVRGGWDNLLAVIPGGSSVPLIPKSICDDVMMDFDALKEVQSGLGTAAVIVMDKSTDI 379
Query: 387 VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT 446
V AIARLS FYKHESCGQCTPCREGTGWLW IMER++ G A EEIDML EVT+QIEGHT
Sbjct: 380 VHAIARLSKFYKHESCGQCTPCREGTGWLWNIMERMRRGEAAKEEIDMLNEVTRQIEGHT 439
Query: 447 ICALGDAAAWPVQGLIRHFRPELERRI 473
ICALGDAAAWPVQGLIRHFR ELERRI
Sbjct: 440 ICALGDAAAWPVQGLIRHFRGELERRI 466
>gi|281203657|gb|EFA77854.1| ubiquinone oxidoreductase [Polysphondylium pallidum PN500]
Length = 481
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/440 (76%), Positives = 382/440 (86%)
Query: 36 STASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKG 95
+ A P P +GGLKD+DRIFTNLYG HD +LKGA KRGDW+RTKD++ KG
Sbjct: 32 AAAGGPTPQQQVQNASIKTYGGLKDQDRIFTNLYGEHDVYLKGAEKRGDWYRTKDIIGKG 91
Query: 96 ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMR 155
DWI+ E+ SGLRGRGGAGFPSGLKWSFMPK S GRP YLV+NADE EPGTCKDREIMR
Sbjct: 92 KDWILKEMMASGLRGRGGAGFPSGLKWSFMPKQSTGRPQYLVINADEGEPGTCKDREIMR 151
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
HDPHKL+EGCLIAG MRA AAYIYIRGE+ +E K LE+A EAY AG LG NACG+GY
Sbjct: 152 HDPHKLIEGCLIAGFAMRACAAYIYIRGEFHHEAKVLEKAIDEAYKAGYLGANACGTGYH 211
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA +GLYGCPTTVTNVETVAV+P
Sbjct: 212 FDVYVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPAMSGLYGCPTTVTNVETVAVAP 271
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TILRRG WFA FGR NSGTKL+C+SGHVN PCTVEEEMSIPL+ELID+HCGGV GGWD
Sbjct: 272 TILRRGGSWFAGFGRPKNSGTKLYCISGHVNNPCTVEEEMSIPLRELIDKHCGGVIGGWD 331
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLL VIPGGSSVP++PK ICDDVLMD+D L+ V+SGLGTAAVIVMDKSTD++ AIARLS
Sbjct: 332 NLLGVIPGGSSVPVIPKDICDDVLMDFDDLRRVRSGLGTAAVIVMDKSTDIIAAIARLSK 391
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQC+PCREGTGWLW I ERL G+AKL+E+DML+E+++QIEGHTICALGDAAA
Sbjct: 392 FYKHESCGQCSPCREGTGWLWDITERLVTGDAKLDEVDMLEEISRQIEGHTICALGDAAA 451
Query: 456 WPVQGLIRHFRPELERRIKE 475
WPVQGLIRH+RPE+E+RI++
Sbjct: 452 WPVQGLIRHYRPEIEQRIQD 471
>gi|440791724|gb|ELR12962.1| NADH oxidoreductase (quinone), F subunit [Acanthamoeba castellanii
str. Neff]
Length = 469
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/425 (77%), Positives = 380/425 (89%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G LKD DRIFTNLYG HD F+KGA+ RGDW++TK+L+ KG DWI+ E+K SGLRGRGGA
Sbjct: 15 YGNLKDSDRIFTNLYGEHDIFIKGALARGDWYKTKELLRKGEDWIIKEIKNSGLRGRGGA 74
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPKVSDGRPSYLV+NADE EPGTCKDREIMRHDPHKL+EGCL+AG M+A
Sbjct: 75 GFPSGLKWSFMPKVSDGRPSYLVINADEGEPGTCKDREIMRHDPHKLVEGCLLAGFSMKA 134
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIY+RGE+V E NL+RA EAY AG LGKNACGSG+DFDV++H GAGAYICGEET+
Sbjct: 135 KAAYIYVRGEFVYEINNLQRAIDEAYEAGFLGKNACGSGFDFDVYVHRGAGAYICGEETS 194
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGK GKPRLKPPFPAN G++GCPTTVTNVETVAV+PTILRRG +WFASFGR NS
Sbjct: 195 LIESIEGKPGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGAEWFASFGRPKNS 254
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFC+SGHVN P TVEEEMSIPLKELI+RH GGVRGGWDNL A+IPGGSSVPLLPK I
Sbjct: 255 GTKLFCISGHVNNPITVEEEMSIPLKELIERHAGGVRGGWDNLKAIIPGGSSVPLLPKSI 314
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CD+VLMD+DAL+ V SGLGTAAVIVMDKSTDV+ AIARLS FY++ESCGQCTPCREG+ W
Sbjct: 315 CDNVLMDFDALRDVTSGLGTAAVIVMDKSTDVIAAIARLSKFYRNESCGQCTPCREGSPW 374
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
LW +MER+ G+AK++EIDML E++ QIEGHTICALGDAAAWPVQG+IRHFR E+E+RI
Sbjct: 375 LWNVMERMVTGDAKIDEIDMLYELSTQIEGHTICALGDAAAWPVQGVIRHFRGEMEQRIH 434
Query: 475 EHAER 479
++ +
Sbjct: 435 DYNSK 439
>gi|328871524|gb|EGG19894.1| ubiquinone oxidoreductase [Dictyostelium fasciculatum]
Length = 473
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/419 (79%), Positives = 374/419 (89%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIFTNLYG HD +LKGA+ RGDW+RTKDL+ KG DWI+ E+ SGLRGRGGA
Sbjct: 43 YGGLKDKDRIFTNLYGEHDVYLKGAIARGDWYRTKDLIGKGKDWIIKEMMASGLRGRGGA 102
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK S GRP YLV+NADE EPGTCKDREIMRHDPHKL+EGCL+AG MRA
Sbjct: 103 GFPSGLKWSFMPKQSTGRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLVAGFAMRA 162
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ E K +E+A EAY AG LG+NACG+GY FD ++H GAGAYICGEETA
Sbjct: 163 CAAYIYIRGEFHLEAKVMEQAIAEAYKAGYLGENACGTGYKFDCYVHRGAGAYICGEETA 222
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA AGLYGCPTTVTNVETVAV+PTILRRG WFA FGR NS
Sbjct: 223 LIESLEGKQGKPRLKPPFPAMAGLYGCPTTVTNVETVAVAPTILRRGGAWFAGFGRPKNS 282
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGV GGWDNLL +IPGGSSVP+LPK I
Sbjct: 283 GTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVIGGWDNLLGIIPGGSSVPVLPKDI 342
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C++VLMD+D L+ V+SGLGTAAV VMDKSTD+V AIARLS FYKHESCGQCTPCREGTGW
Sbjct: 343 CNEVLMDFDDLRRVRSGLGTAAVTVMDKSTDIVGAIARLSKFYKHESCGQCTPCREGTGW 402
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+W +MERL G+AKL+EIDML+E+T+Q+EGHTICALGDAAAWP+QGL+RHFRPE+E RI
Sbjct: 403 MWDVMERLVTGDAKLDEIDMLEEITRQVEGHTICALGDAAAWPIQGLLRHFRPEVEARI 461
>gi|449016906|dbj|BAM80308.1| NADH dehydrogenase I flavoprotein 51kDa subunit [Cyanidioschyzon
merolae strain 10D]
Length = 495
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/462 (74%), Positives = 390/462 (84%), Gaps = 6/462 (1%)
Query: 12 RASLVRCYSERLSVGLRSFST-QGASTASTPQPPPPPPPPEKTH----FGGLKDEDRIFT 66
R SL R +R + F+T + +S+ +T P P P ++ +G LKD+DRIFT
Sbjct: 6 RGSLQRVVHKRTRWLVGVFTTLRSSSSVATGAPAPKPETWRASNAERSYGLLKDQDRIFT 65
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
NLYG D FL GA+KRGDW+RTKDLVLKG DWI+NE+K SGLRGRGGAGFP+GLK+SFMP
Sbjct: 66 NLYGERDAFLDGALKRGDWYRTKDLVLKGRDWIINEIKASGLRGRGGAGFPTGLKYSFMP 125
Query: 127 KVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEY 185
+ + DGRP+YLVVN DESEPGT KDREIMRHDPHKL+EG L+ GV M A AAY YIRGEY
Sbjct: 126 RQNPDGRPNYLVVNCDESEPGTAKDREIMRHDPHKLVEGMLLVGVSMGARAAYAYIRGEY 185
Query: 186 VNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGK 245
V ERK LERA QEAY GL+G+NACGSGYDFDV++H+GAGAYICGEETALLESLEGKQGK
Sbjct: 186 VYERKQLERAVQEAYQKGLIGRNACGSGYDFDVYVHHGAGAYICGEETALLESLEGKQGK 245
Query: 246 PRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHV 305
PRLKPPFPAN GLYGCPTTVTN ETVAV PTILRRG WFAS GRKNN GTKLF +SGHV
Sbjct: 246 PRLKPPFPANIGLYGCPTTVTNTETVAVVPTILRRGSSWFASLGRKNNCGTKLFIISGHV 305
Query: 306 NKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDAL 365
N PC VEEEMSIPL+ LI+RH GGVRGGW+NLLAVIPGGSSVPLLPK ICDDV+MD+DAL
Sbjct: 306 NNPCVVEEEMSIPLRTLIERHAGGVRGGWENLLAVIPGGSSVPLLPKDICDDVMMDFDAL 365
Query: 366 KAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVG 425
K V SGLGTAAVIVMD+STD+V AI R+SYFY+HESCGQCTPCREGTGWL ++ R++ G
Sbjct: 366 KEVGSGLGTAAVIVMDRSTDIVAAIRRISYFYQHESCGQCTPCREGTGWLHRMLCRMEKG 425
Query: 426 NAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRP 467
+A++EEIDML EVTK IEGHTICALGDAAAWPVQGLIRHFRP
Sbjct: 426 DARIEEIDMLYEVTKNIEGHTICALGDAAAWPVQGLIRHFRP 467
>gi|330843279|ref|XP_003293586.1| ubiquinone oxidoreductase [Dictyostelium purpureum]
gi|325076073|gb|EGC29892.1| ubiquinone oxidoreductase [Dictyostelium purpureum]
Length = 477
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/452 (74%), Positives = 384/452 (84%), Gaps = 8/452 (1%)
Query: 29 SFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRT 88
SFST A+ + +GGLKD+DRIFTNLYG HD +LKGAM RGDW+RT
Sbjct: 29 SFSTAATQMATAQE--------NVRTYGGLKDQDRIFTNLYGEHDVYLKGAMLRGDWYRT 80
Query: 89 KDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTC 148
KD++ KG DWI+ E+ SGLRGRGGAGFPSGLKWSFMPKV GRP YLV+NADE EPGTC
Sbjct: 81 KDIIDKGKDWILKEMMASGLRGRGGAGFPSGLKWSFMPKVLKGRPHYLVINADEGEPGTC 140
Query: 149 KDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKN 208
KDREIMRHDPHKL+EGCLIAG M+A AAYIYIRGE+ E K LE+A +EAY AGL+G+N
Sbjct: 141 KDREIMRHDPHKLIEGCLIAGFAMKACAAYIYIRGEFHYEAKVLEQAIEEAYKAGLIGEN 200
Query: 209 ACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNV 268
A G+GY FDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA AGLYGCPTTVTNV
Sbjct: 201 ASGTGYKFDVYVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPAMAGLYGCPTTVTNV 260
Query: 269 ETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCG 328
ETVAV+PTILRRG WFA FGR N+GTKL+C+SGHVN PCTVEEEMSIPL+ELID+HCG
Sbjct: 261 ETVAVAPTILRRGGAWFAGFGRPKNAGTKLYCISGHVNNPCTVEEEMSIPLRELIDKHCG 320
Query: 329 GVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVD 388
GV GGW+NL VIPGGSSVP+LPK+ICDDVLMD+D L+ +SGLGTAAVIVM+K TD++
Sbjct: 321 GVIGGWENLKGVIPGGSSVPVLPKNICDDVLMDFDDLRKHRSGLGTAAVIVMNKETDMIK 380
Query: 389 AIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTIC 448
AIARLS FYKHESCGQCTPCREGTGWLW I ERL G+AKL+EIDML+E++KQIEGHTIC
Sbjct: 381 AIARLSKFYKHESCGQCTPCREGTGWLWDITERLVTGDAKLDEIDMLEEISKQIEGHTIC 440
Query: 449 ALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
ALGDAAAWPVQGLIR FRPE+E RIK+ ++
Sbjct: 441 ALGDAAAWPVQGLIRSFRPEIEDRIKQFQSKQ 472
>gi|215694413|dbj|BAG89406.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704716|dbj|BAG94744.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 411
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/366 (95%), Positives = 361/366 (98%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
+SFSTQ A+T+STPQPPPPPPPPEKTHFG LKDEDRIFTNLYG HDPFLKGAMKRGDWHR
Sbjct: 46 KSFSTQAATTSSTPQPPPPPPPPEKTHFGDLKDEDRIFTNLYGQHDPFLKGAMKRGDWHR 105
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TKDLVLKGADWIVNE+KKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT
Sbjct: 106 TKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 165
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNER NL +AR+EAYAAGLLGK
Sbjct: 166 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLLKAREEAYAAGLLGK 225
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFDVHIH+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN
Sbjct: 226 NACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 285
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAVSPTILRRGP+WFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI++HC
Sbjct: 286 VETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIEKHC 345
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNLLA+IPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV
Sbjct: 346 GGVRGGWDNLLAIIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 405
Query: 388 DAIARL 393
DAIARL
Sbjct: 406 DAIARL 411
>gi|194860015|ref|XP_001969499.1| GG10139 [Drosophila erecta]
gi|190661366|gb|EDV58558.1| GG10139 [Drosophila erecta]
Length = 474
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/425 (77%), Positives = 372/425 (87%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGAMKRGDW++TK++VLKGADWIVNE+K SGLRGRGGA
Sbjct: 47 FGPLADEDRIFTNLYGRHDWRLKGAMKRGDWYKTKEIVLKGADWIVNEIKTSGLRGRGGA 106
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 107 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 166
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGL+GKNACG+GYDFDV +H GAGAYICGEETA
Sbjct: 167 QAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGTGYDFDVFMHRGAGAYICGEETA 226
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAV+P+I RRG WFASFGR NS
Sbjct: 227 LIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPSICRRGGVWFASFGRTRNS 286
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN+PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++PK++
Sbjct: 287 GTKLFNISGHVNRPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNV 346
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG GW
Sbjct: 347 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGW 406
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 407 MNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 466
Query: 475 EHAER 479
HA+R
Sbjct: 467 LHAKR 471
>gi|19920794|ref|NP_608987.1| CG9140 [Drosophila melanogaster]
gi|7297065|gb|AAF52334.1| CG9140 [Drosophila melanogaster]
gi|15291595|gb|AAK93066.1| GM14163p [Drosophila melanogaster]
gi|220945776|gb|ACL85431.1| CG9140-PA [synthetic construct]
gi|220955472|gb|ACL90279.1| CG9140-PA [synthetic construct]
Length = 474
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/425 (77%), Positives = 372/425 (87%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA+KRGDW++TK++VLKGADWIVNE+K SGLRGRGGA
Sbjct: 47 FGPLADEDRIFTNLYGRHDWRLKGALKRGDWYKTKEIVLKGADWIVNEIKTSGLRGRGGA 106
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 107 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 166
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGL+GKNACG+GYDFDV +H GAGAYICGEETA
Sbjct: 167 QAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGTGYDFDVFMHRGAGAYICGEETA 226
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAV+PTI RRG WFASFGR NS
Sbjct: 227 LIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPTICRRGGVWFASFGRTRNS 286
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN+PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++PK++
Sbjct: 287 GTKLFNISGHVNRPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNV 346
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG GW
Sbjct: 347 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGW 406
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 407 MNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 466
Query: 475 EHAER 479
HA+R
Sbjct: 467 LHAKR 471
>gi|195473699|ref|XP_002089130.1| GE18950 [Drosophila yakuba]
gi|194175231|gb|EDW88842.1| GE18950 [Drosophila yakuba]
Length = 474
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/425 (77%), Positives = 371/425 (87%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA+KRGDW++TK++VLKGADWIVNE+K SGLRGRGGA
Sbjct: 47 FGPLADEDRIFTNLYGRHDWRLKGALKRGDWYKTKEIVLKGADWIVNEIKTSGLRGRGGA 106
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 107 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 166
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGL+GKNACG+GYDFDV +H GAGAYICGEETA
Sbjct: 167 QAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGTGYDFDVFMHRGAGAYICGEETA 226
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAV+PTI RRG WFA FGR NS
Sbjct: 227 LIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPTICRRGGVWFAGFGRTRNS 286
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN+PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++PK++
Sbjct: 287 GTKLFNISGHVNRPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNV 346
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG GW
Sbjct: 347 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGW 406
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 407 MNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 466
Query: 475 EHAER 479
HA+R
Sbjct: 467 LHAKR 471
>gi|195115497|ref|XP_002002293.1| GI13499 [Drosophila mojavensis]
gi|193912868|gb|EDW11735.1| GI13499 [Drosophila mojavensis]
Length = 476
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/425 (77%), Positives = 371/425 (87%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA KRGDW++TK++VLKG DWI+NE+K SGLRGRGGA
Sbjct: 46 FGPLADEDRIFTNLYGRHDWRLKGAQKRGDWYKTKEIVLKGPDWIINEIKTSGLRGRGGA 105
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 106 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 165
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGL+GKNACGSGY+FDV +H GAGAYICGEETA
Sbjct: 166 QAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGSGYNFDVFMHRGAGAYICGEETA 225
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PTI RRG +WFASFGR NS
Sbjct: 226 LIESLEGKQGKPRLKPPFPADVGLFGCPTTVTNVETVAVAPTICRRGGNWFASFGRTRNS 285
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN+PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++P+ +
Sbjct: 286 GTKLFNISGHVNRPCTVEEEMSIPLKELIERHCGGVIGGWDNLLGVIPGGSSTPIIPRKV 345
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG GW
Sbjct: 346 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGW 405
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 406 MNKIMTRFVKGDAQPSEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 465
Query: 475 EHAER 479
+HA++
Sbjct: 466 QHAQQ 470
>gi|195030314|ref|XP_001988013.1| GH10936 [Drosophila grimshawi]
gi|193904013|gb|EDW02880.1| GH10936 [Drosophila grimshawi]
Length = 476
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/425 (77%), Positives = 372/425 (87%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA KRGDW++TK++VLKG DWI+NEVK SGLRGRGGA
Sbjct: 46 FGPLADEDRIFTNLYGRHDWRLKGAQKRGDWYKTKEIVLKGPDWIINEVKTSGLRGRGGA 105
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDR+IMRHDPHKL+EGCLIAG M A
Sbjct: 106 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDRDIMRHDPHKLVEGCLIAGRAMGA 165
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGL+GK+ACG+GYDFDV +H GAGAYICGEETA
Sbjct: 166 QAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKDACGTGYDFDVFMHRGAGAYICGEETA 225
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PTI RRG +WFASFGR NS
Sbjct: 226 LIESLEGKQGKPRLKPPFPADVGLFGCPTTVTNVETVAVAPTICRRGGNWFASFGRTRNS 285
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN+PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++PK +
Sbjct: 286 GTKLFNISGHVNRPCTVEEEMSIPLKELIERHCGGVIGGWDNLLGVIPGGSSTPIIPKKV 345
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL +FYKHESCGQCTPCREG GW
Sbjct: 346 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLIHFYKHESCGQCTPCREGIGW 405
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IMER G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 406 MNKIMERFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 465
Query: 475 EHAER 479
HA++
Sbjct: 466 LHAQQ 470
>gi|194760181|ref|XP_001962320.1| GF15407 [Drosophila ananassae]
gi|190616017|gb|EDV31541.1| GF15407 [Drosophila ananassae]
Length = 477
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/425 (76%), Positives = 372/425 (87%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA KRGDW++TK++VLKG DWI+NE+K SGLRGRGGA
Sbjct: 47 FGPLADEDRIFTNLYGRHDWRLKGAQKRGDWYKTKEIVLKGPDWIINEIKTSGLRGRGGA 106
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 107 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 166
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGL+GKNACG+GYDFDV +H GAGAYICGEETA
Sbjct: 167 QAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGTGYDFDVFMHRGAGAYICGEETA 226
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAV+P+I RRG +WFASFGR NS
Sbjct: 227 LIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPSICRRGGNWFASFGRTRNS 286
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN+PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++PK++
Sbjct: 287 GTKLFNISGHVNRPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNV 346
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG GW
Sbjct: 347 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGW 406
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 407 MNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEVEKRMQ 466
Query: 475 EHAER 479
++A++
Sbjct: 467 QYAQQ 471
>gi|195385529|ref|XP_002051457.1| GJ12140 [Drosophila virilis]
gi|194147914|gb|EDW63612.1| GJ12140 [Drosophila virilis]
Length = 476
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/425 (77%), Positives = 370/425 (87%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA KRGDW++TK++VLKG DWI+NE+K SGLRGRGGA
Sbjct: 46 FGPLADEDRIFTNLYGRHDWRLKGAQKRGDWYKTKEIVLKGPDWIINEIKTSGLRGRGGA 105
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 106 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 165
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGL+GKNACGSGY+FDV +H GAGAYICGEETA
Sbjct: 166 QAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGSGYNFDVFMHRGAGAYICGEETA 225
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PTI RRG +WFASFGR NS
Sbjct: 226 LIESLEGKQGKPRLKPPFPADVGLFGCPTTVTNVETVAVAPTICRRGGNWFASFGRTRNS 285
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++P+ +
Sbjct: 286 GTKLFNISGHVNNPCTVEEEMSIPLKELIERHCGGVIGGWDNLLGVIPGGSSTPIIPRKV 345
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG GW
Sbjct: 346 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGW 405
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 406 MNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 465
Query: 475 EHAER 479
+HA++
Sbjct: 466 QHAQQ 470
>gi|195146494|ref|XP_002014219.1| GL19080 [Drosophila persimilis]
gi|194106172|gb|EDW28215.1| GL19080 [Drosophila persimilis]
Length = 477
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/450 (74%), Positives = 382/450 (84%), Gaps = 1/450 (0%)
Query: 31 STQGASTASTPQPPPPPPPPE-KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTK 89
S Q ST PP PPP+ KT FG L DEDRIFTNLYG HD LKGA+KRGDW++TK
Sbjct: 22 SLQLQRLQSTQAPPAGTPPPQTKTKFGPLADEDRIFTNLYGRHDWRLKGALKRGDWYKTK 81
Query: 90 DLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCK 149
++VLKG +WI+NE+K SGLRGRGGAGFPSG+KWSFM K DGRP YLVVNADE EPGTCK
Sbjct: 82 EIVLKGPNWIINEIKTSGLRGRGGAGFPSGMKWSFMQKPGDGRPKYLVVNADEGEPGTCK 141
Query: 150 DREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNA 209
DR+IMRHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N++ A EAY AGL+GKNA
Sbjct: 142 DRDIMRHDPHKLVEGCLIAGAAMGAQAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNA 201
Query: 210 CGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVE 269
CG+GYDFDV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVE
Sbjct: 202 CGTGYDFDVFMHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVE 261
Query: 270 TVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGG 329
TVAV+P I RRG WFASFGR NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RHCGG
Sbjct: 262 TVAVAPAICRRGGTWFASFGRTRNSGTKLFNISGHVNNPCTVEEEMSIPLKELIERHCGG 321
Query: 330 VRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDA 389
V GGWDNLL VIPGGSS P++PK++CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ A
Sbjct: 322 VTGGWDNLLGVIPGGSSTPIIPKNVCDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKA 381
Query: 390 IARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICA 449
IARL FYKHESCGQCTPCREG GW+ IM R G+A+ EIDML E++KQIEGHTICA
Sbjct: 382 IARLISFYKHESCGQCTPCREGIGWMNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICA 441
Query: 450 LGDAAAWPVQGLIRHFRPELERRIKEHAER 479
LGD AAWPVQGLIRHFRPE+E+R+++HA++
Sbjct: 442 LGDGAAWPVQGLIRHFRPEIEKRMQQHAQQ 471
>gi|125986851|ref|XP_001357188.1| GA21571 [Drosophila pseudoobscura pseudoobscura]
gi|54645518|gb|EAL34256.1| GA21571 [Drosophila pseudoobscura pseudoobscura]
Length = 477
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/450 (74%), Positives = 381/450 (84%), Gaps = 1/450 (0%)
Query: 31 STQGASTASTPQPPPPPPPPE-KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTK 89
S Q ST PP PPP+ KT FG L DEDRIFTNLYG HD LKGA+KRGDW++TK
Sbjct: 22 SLQLQRLQSTQAPPAGTPPPQTKTKFGPLADEDRIFTNLYGRHDWRLKGALKRGDWYKTK 81
Query: 90 DLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCK 149
++VLKG +WI+NE+K SGLRGRGGAGFPSG+KWSFM K DGRP YLVVNADE EPGTCK
Sbjct: 82 EIVLKGPNWIINEIKTSGLRGRGGAGFPSGMKWSFMQKPGDGRPKYLVVNADEGEPGTCK 141
Query: 150 DREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNA 209
DR+IMRHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N++ A EAY AGL+GKNA
Sbjct: 142 DRDIMRHDPHKLVEGCLIAGAAMGAQAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNA 201
Query: 210 CGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVE 269
CG+GYDFDV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVE
Sbjct: 202 CGTGYDFDVFMHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVE 261
Query: 270 TVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGG 329
TVAV+P I RRG WFASFGR NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RHCGG
Sbjct: 262 TVAVAPAICRRGGTWFASFGRTRNSGTKLFNISGHVNNPCTVEEEMSIPLKELIERHCGG 321
Query: 330 VRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDA 389
V GGWDNLL VIPGGSS P++PK +CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ A
Sbjct: 322 VTGGWDNLLGVIPGGSSTPIIPKKVCDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKA 381
Query: 390 IARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICA 449
IARL FYKHESCGQCTPCREG GW+ IM R G+A+ EIDML E++KQIEGHTICA
Sbjct: 382 IARLISFYKHESCGQCTPCREGIGWMNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICA 441
Query: 450 LGDAAAWPVQGLIRHFRPELERRIKEHAER 479
LGD AAWPVQGLIRHFRPE+E+R+++HA++
Sbjct: 442 LGDGAAWPVQGLIRHFRPEIEKRMQQHAQQ 471
>gi|51947519|gb|AAU14244.1| hydrogenosomal NADH dehydrogenase 51 kDa subunit [Euplotes sp.
BB-2004]
Length = 470
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/422 (77%), Positives = 372/422 (88%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G L+D+DRIFTNLY DPF+ GA+KRGDWH+TKD+VL G DWI++++K SGLRGRGGA
Sbjct: 29 YGNLQDQDRIFTNLYRDGDPFIDGALKRGDWHKTKDIVLNGDDWIIDQIKASGLRGRGGA 88
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLK+SFMPKVSDGRPSYLV+NADESEPGTCKDREIMRHDPHKL+EG L GV MRA
Sbjct: 89 GFPSGLKYSFMPKVSDGRPSYLVINADESEPGTCKDREIMRHDPHKLIEGALCVGVSMRA 148
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ + LERA EAY GL+GKNACG+GYDFDVH+ +GAGAYICGEET
Sbjct: 149 KAAYIYIRGEFWYQYNCLERAISEAYERGLIGKNACGTGYDFDVHVVHGAGAYICGEETG 208
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPR+KPPFPANAGLYGCPTTVTNVETVAV PTILRR P+WFASFGRKNN+
Sbjct: 209 LIESLEGKQGKPRMKPPFPANAGLYGCPTTVTNVETVAVCPTILRRTPEWFASFGRKNNA 268
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF VSGHVN P EEEMSIPL+ELI++HCGGV GGWDNL A+IPGGSSVPLLPK I
Sbjct: 269 GTKLFAVSGHVNNPGVFEEEMSIPLRELIEKHCGGVTGGWDNLKAIIPGGSSVPLLPKRI 328
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDVLMD+DAL+ V+SGLGTAAVIVMDKSTDV+ AI RLS FY HESCGQCTPCREGT W
Sbjct: 329 CDDVLMDFDALRDVRSGLGTAAVIVMDKSTDVIAAIHRLSKFYAHESCGQCTPCREGTSW 388
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ ++ R++ GNA EIDML+E++ QIEGHTICALGDAAAWPVQGLIRHFR E+E RI+
Sbjct: 389 MEDMLGRMRKGNADFAEIDMLEELSYQIEGHTICALGDAAAWPVQGLIRHFRHEMEDRIE 448
Query: 475 EH 476
++
Sbjct: 449 DY 450
>gi|308510360|ref|XP_003117363.1| CRE-NUO-1 protein [Caenorhabditis remanei]
gi|308242277|gb|EFO86229.1| CRE-NUO-1 protein [Caenorhabditis remanei]
Length = 479
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/472 (71%), Positives = 382/472 (80%), Gaps = 5/472 (1%)
Query: 20 SERLSVGLRSFSTQGASTA-----STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDP 74
S +S+G R + + A ++ Q EKT FG LKD DRIFTNLYG HD
Sbjct: 3 SAAVSLGARLIGQKASKVAVRGVVTSAQNSNAQVKQEKTSFGNLKDSDRIFTNLYGRHDY 62
Query: 75 FLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPS 134
LKGAM RGDWH+TK+++LKG+DWI+ E+K SGLRGRGGAGFPSG+KW FM K DGRP
Sbjct: 63 RLKGAMARGDWHKTKEIILKGSDWILGELKTSGLRGRGGAGFPSGMKWGFMNKPFDGRPK 122
Query: 135 YLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLER 194
YLVVNADE EPGTCKDREIMRHDPHKL+EGCLI GV M A AAYIYIRGE+ NE L+
Sbjct: 123 YLVVNADEGEPGTCKDREIMRHDPHKLIEGCLIGGVAMGARAAYIYIRGEFYNEACILQE 182
Query: 195 ARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPA 254
A EAY AG LGK+ G+GY+FDV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA
Sbjct: 183 AINEAYKAGYLGKDCLGTGYNFDVFVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPA 242
Query: 255 NAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEE 314
+ GL+GCPTTVTNVETVAV+PTI RRG DWFASFGR+ N GTKLFC+SG VN PCTVEEE
Sbjct: 243 DIGLFGCPTTVTNVETVAVAPTICRRGGDWFASFGRERNRGTKLFCISGQVNNPCTVEEE 302
Query: 315 MSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGT 374
MS+PLK+LI+RHCGGV GGWDNLLA+IPGGSSVPL+PK++CD VLMD+DAL A QSGLGT
Sbjct: 303 MSVPLKDLIERHCGGVIGGWDNLLAIIPGGSSVPLMPKNVCDTVLMDFDALVAAQSGLGT 362
Query: 375 AAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDM 434
AAVIVM+K TD+V IARLS FYKHESCGQCTPCREG WL +M R G AK EIDM
Sbjct: 363 AAVIVMNKQTDIVKCIARLSLFYKHESCGQCTPCREGCNWLNKMMWRFVDGKAKPSEIDM 422
Query: 435 LQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
+ E++KQIEGHTICALGDAAAWPVQGLIRHFRPELERR+ E ++ L E A
Sbjct: 423 MWELSKQIEGHTICALGDAAAWPVQGLIRHFRPELERRMAEFHKQVLAEQGA 474
>gi|384483649|gb|EIE75829.1| NADH dehydrogenase [ubiquinone] flavoprotein 1 [Rhizopus delemar RA
99-880]
Length = 458
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/446 (73%), Positives = 381/446 (85%), Gaps = 6/446 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
R+F+++ A P P KT FGGL DEDRIFTN+Y HD LKGA+KRGDW++
Sbjct: 10 RTFASEAAPN------PNANPITGKTSFGGLSDEDRIFTNVYSKHDYRLKGALKRGDWYK 63
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TK+LVLKG +WI+NE+K+SGLRGRGGAGFP+GLKWSFM K DGRP YLV+NADE EPGT
Sbjct: 64 TKELVLKGPEWIINEMKESGLRGRGGAGFPTGLKWSFMNKPLDGRPRYLVINADEGEPGT 123
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREI+R DPHKL+EGCL+AG M+A+AAYIYIRGE+ E +L+ A EAY AGL+GK
Sbjct: 124 CKDREILRGDPHKLIEGCLLAGSAMKANAAYIYIRGEFYQEATHLQTAINEAYEAGLIGK 183
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFDV+IH GAGAYICGEET+L+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTN
Sbjct: 184 NACGSGYDFDVYIHRGAGAYICGEETSLIESIEGKQGKPRLKPPFPADIGLFGCPTTVTN 243
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAV+PTILRRG WFA FGR N+GTKLFC+SGHVN PCTVEEEMSIPLKELI++HC
Sbjct: 244 VETVAVAPTILRRGGTWFAGFGRPRNTGTKLFCISGHVNNPCTVEEEMSIPLKELIEKHC 303
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNLL ++PGGSSVP+LPK+ICDDVLMD+DAL+ SGLGTAAVIVMDKSTD+V
Sbjct: 304 GGVRGGWDNLLGIVPGGSSVPVLPKNICDDVLMDFDALRDANSGLGTAAVIVMDKSTDIV 363
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
AI+R + FY+HESCGQCTPCREGT WL +M+R + G EEID + E+TKQIEGHTI
Sbjct: 364 RAISRFAKFYRHESCGQCTPCREGTKWLESMMDRFEDGRGHKEEIDQIWELTKQIEGHTI 423
Query: 448 CALGDAAAWPVQGLIRHFRPELERRI 473
CALGDAAAWPVQGLIRHFRPELE R+
Sbjct: 424 CALGDAAAWPVQGLIRHFRPELEERM 449
>gi|242001646|ref|XP_002435466.1| NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit, putative
[Ixodes scapularis]
gi|215498802|gb|EEC08296.1| NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit, putative
[Ixodes scapularis]
Length = 477
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/469 (72%), Positives = 385/469 (82%), Gaps = 2/469 (0%)
Query: 20 SERLSVGLRSFSTQGASTAS--TPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLK 77
S RL LR +T S P PPP KT FG L DEDRIF NLYG HD LK
Sbjct: 8 SSRLQTVLRVSVRNPLTTTSRYNASAPAQPPPQTKTKFGPLSDEDRIFQNLYGRHDWRLK 67
Query: 78 GAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
GAM RGDW++TK++VLKGADWI++E+KKSGLRGRGGAGFPSGLKWSFM K SDGRP YLV
Sbjct: 68 GAMSRGDWYKTKEIVLKGADWIIDEIKKSGLRGRGGAGFPSGLKWSFMNKPSDGRPKYLV 127
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
VNADE EPGTCKDREIMRHDPH L+EGCL+AG M A AAYIYIRGE+ NE NL+ A +
Sbjct: 128 VNADEGEPGTCKDREIMRHDPHTLVEGCLVAGRAMGARAAYIYIRGEFYNEASNLQIAIR 187
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
EAY AG LGKNACGSGYDFDV +H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G
Sbjct: 188 EAYQAGYLGKNACGSGYDFDVFVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVG 247
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
++GCPTTVTNVETVAVSPTI RRG +WFASFGR NSGTKLF +SGHVN PCTVEEEMSI
Sbjct: 248 VFGCPTTVTNVETVAVSPTICRRGGEWFASFGRTRNSGTKLFNISGHVNTPCTVEEEMSI 307
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
PLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CDDVLMD+DAL A Q+GLGTAAV
Sbjct: 308 PLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKSVCDDVLMDFDALVAAQTGLGTAAV 367
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVM+K TD++ AIARL FYKHESCGQCTPCREG GWL +M R GNA+++EIDM+ E
Sbjct: 368 IVMNKQTDMIRAIARLLEFYKHESCGQCTPCREGVGWLHKMMGRFVSGNARVDEIDMVYE 427
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
++KQIEGHTICALGD AAWPVQGL+RHFRP +E RI++ + +A A
Sbjct: 428 LSKQIEGHTICALGDGAAWPVQGLVRHFRPLMEERIRQFQSGKASKAAA 476
>gi|170039879|ref|XP_001847747.1| NADH dehydrogenase flavoprotein 1, mitochondrial [Culex
quinquefasciatus]
gi|167863468|gb|EDS26851.1| NADH dehydrogenase flavoprotein 1, mitochondrial [Culex
quinquefasciatus]
Length = 474
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/433 (75%), Positives = 371/433 (85%)
Query: 47 PPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKS 106
PPP +T FGGL D+DRIFTNLYG HD LKGA+KRGDW++TK+++LKG +WI+NE K S
Sbjct: 37 PPPQTRTTFGGLADQDRIFTNLYGRHDWRLKGALKRGDWYKTKEILLKGTEWIINETKAS 96
Query: 107 GLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GLRGRGGAGFP+G+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL
Sbjct: 97 GLRGRGGAGFPTGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCL 156
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
IAG M A AAYIYIRGE+ NE N++ A EAY AGL+GKNACGSGYDFDV +H GAGA
Sbjct: 157 IAGRCMGARAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGSGYDFDVFMHRGAGA 216
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV+NVETVAV+PTI RRG WFA
Sbjct: 217 YICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVSNVETVAVAPTICRRGGAWFA 276
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGV GGWDNLL +IPGGSS
Sbjct: 277 SFGRTRNSGTKLFNISGHVNNPCTVEEEMSIPLKELIERHAGGVTGGWDNLLGIIPGGSS 336
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P++PK +CDDVLMD+D L Q+ LGTAA+IVMDKSTDV+ AI+RL FYKHESCGQCT
Sbjct: 337 TPIIPKSVCDDVLMDFDGLVQAQTSLGTAAIIVMDKSTDVIKAISRLIDFYKHESCGQCT 396
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG W+ +M R GNA+ +EIDML E++KQIEGHTICALGD AAWPVQGLIRHFR
Sbjct: 397 PCREGIAWMHKMMHRFVDGNARPDEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFR 456
Query: 467 PELERRIKEHAER 479
PE+E R+K+H ++
Sbjct: 457 PEIEARMKKHEQQ 469
>gi|290988111|ref|XP_002676765.1| predicted protein [Naegleria gruberi]
gi|284090369|gb|EFC44021.1| predicted protein [Naegleria gruberi]
Length = 480
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/426 (76%), Positives = 375/426 (88%), Gaps = 1/426 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
GGLKD+DRIFTNLY D + GAMKRGDW +TKDL+ KG DWI++++KKSGLRGRGGAG
Sbjct: 44 GGLKDKDRIFTNLYENFDRHIDGAMKRGDWFKTKDLINKGPDWIIDQIKKSGLRGRGGAG 103
Query: 116 FPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
F SGLK+SFMPK + DGRPSYLV+N+DESEPGTCKDREI+R+DPHKL+EG L+ G GMRA
Sbjct: 104 FNSGLKYSFMPKSNPDGRPSYLVINSDESEPGTCKDREIVRNDPHKLVEGALLVGFGMRA 163
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE + L+ A EAY G LGKNACG+GY+FDV++H GAGAYICGEETA
Sbjct: 164 RAAYIYIRGEFYNESRRLQEAIDEAYQKGFLGKNACGTGYEFDVYVHRGAGAYICGEETA 223
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGKQGKPRLKPPFPA GL+ CPTTVTNVETVAV PTILRR P+WFA FGRKNN+
Sbjct: 224 LIESIEGKQGKPRLKPPFPAGVGLFSCPTTVTNVETVAVVPTILRRSPEWFAGFGRKNNA 283
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKL+ +SGHVN PC VEEEMSIPLKELI+RH GGVRGGWDNLLA+IPGGSSVPL+PK I
Sbjct: 284 GTKLYAISGHVNTPCVVEEEMSIPLKELIERHAGGVRGGWDNLLAIIPGGSSVPLIPKEI 343
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C+ VLMD+DAL+ VQSGLGTAAV+VMDKSTD+VDAIARLS FY HESCGQCTPCREGTGW
Sbjct: 344 CETVLMDFDALREVQSGLGTAAVMVMDKSTDIVDAIARLSKFYAHESCGQCTPCREGTGW 403
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
L +M+R+ GNA++EEID L+EV++QIEGHTICALGDAAAWPVQGLIRHFR E+E RIK
Sbjct: 404 LLNMMDRMVKGNAEIEEIDTLEEVSRQIEGHTICALGDAAAWPVQGLIRHFRGEMEDRIK 463
Query: 475 EHAERE 480
++ E
Sbjct: 464 KYKNAE 469
>gi|442752575|gb|JAA68447.1| Putative nadh:ubiquinone oxidoreductase ndufv1/51kda subunit
[Ixodes ricinus]
Length = 477
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/469 (72%), Positives = 386/469 (82%), Gaps = 2/469 (0%)
Query: 20 SERLSVGLRSFSTQGASTAS--TPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLK 77
S RL LR +T S P PPP KT FG L DEDRIF NLYG HD LK
Sbjct: 8 SSRLQTLLRVSVCNPLTTTSRYNASAPAQPPPQTKTKFGPLSDEDRIFQNLYGRHDWRLK 67
Query: 78 GAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
GAM RGDW++TK++VLKG+DWI++E+KKSGLRGRGGAGFPSGLKWSFM K SDGRP YLV
Sbjct: 68 GAMSRGDWYKTKEIVLKGSDWIIDEIKKSGLRGRGGAGFPSGLKWSFMNKPSDGRPKYLV 127
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
VNADE EPGTCKDREIMRHDPH L+EGCL+AG M A AAYIYIRGE+ NE NL+ A +
Sbjct: 128 VNADEGEPGTCKDREIMRHDPHTLVEGCLVAGRAMGARAAYIYIRGEFYNEASNLQIAIR 187
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
EAY AG LGKNACG+GYDFDV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G
Sbjct: 188 EAYQAGYLGKNACGTGYDFDVFVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVG 247
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
++GCPTTVTNVETVAVSPTI RRG +WFASFGR NSGTKLF +SGHVN PCTVEEEMSI
Sbjct: 248 VFGCPTTVTNVETVAVSPTICRRGGEWFASFGRTRNSGTKLFNISGHVNTPCTVEEEMSI 307
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
PLKELI+RH GGV GGWDNLL VIPGGSS P++PK++CDDVLMD+DAL A Q+GLGTAAV
Sbjct: 308 PLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKNVCDDVLMDFDALVAAQTGLGTAAV 367
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVM+K TD++ AIARL FYKHESCGQCTPCREG GWL +M R GNA+++EIDM+ E
Sbjct: 368 IVMNKQTDMIRAIARLLEFYKHESCGQCTPCREGVGWLHKMMGRFVSGNARVDEIDMVYE 427
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
++KQIEGHTICALGD AAWPVQGL+RHFRP +E RIK+ + +A A
Sbjct: 428 LSKQIEGHTICALGDGAAWPVQGLVRHFRPLMEERIKQFQSGKASKAAA 476
>gi|156042201|ref|XP_001587658.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Sclerotinia sclerotiorum 1980]
gi|154696034|gb|EDN95772.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Sclerotinia sclerotiorum 1980 UF-70]
Length = 508
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/480 (69%), Positives = 392/480 (81%), Gaps = 9/480 (1%)
Query: 5 KGVLSLQRASLVRCYSERLSVGLRSFS-TQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 63
K +L L + RLS + S ++G +T + PPPP+KT +GGL+D+DR
Sbjct: 10 KAASTLSTRILSSSAAARLSPSISSVQQSRGLATVADT-----PPPPKKTQWGGLRDQDR 64
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWS 123
IF NLYG H L A K GDWHRTKD++ KG DWI++E+K SGLRGRGGAGFPSG+KWS
Sbjct: 65 IFQNLYGHHGADLASAKKYGDWHRTKDILAKGHDWIISEIKASGLRGRGGAGFPSGMKWS 124
Query: 124 FMPKV---SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180
FM +D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG M +AAYIY
Sbjct: 125 FMNFKGWENDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVAGRAMNCTAAYIY 184
Query: 181 IRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
IRGE+ +E L+RA QEAY GL+GKNACGSGYDFDV++H G GAY+CGEET+L+ESLE
Sbjct: 185 IRGEFYHEATVLQRAIQEAYKDGLIGKNACGSGYDFDVYVHRGMGAYVCGEETSLIESLE 244
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GK GKPRLKPPFPA+ GL+GCP+TV NVET+AV+PTI RRG DWFASFGR+ N+GTKLFC
Sbjct: 245 GKPGKPRLKPPFPASVGLFGCPSTVANVETIAVAPTICRRGGDWFASFGRERNAGTKLFC 304
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
+SGHVN PCTVEEEMSIPL+ELID+HCGGVRGGWDNL AVIPGGSS P+LPK++CDD LM
Sbjct: 305 ISGHVNNPCTVEEEMSIPLRELIDKHCGGVRGGWDNLKAVIPGGSSTPILPKNVCDDQLM 364
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
D+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCTPCREG+ W IM+
Sbjct: 365 DFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMQ 424
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
R + G K+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE R+K++AE+
Sbjct: 425 RFEKGQGKIREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARMKDYAEKN 484
>gi|258567288|ref|XP_002584388.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Uncinocarpus reesii
1704]
gi|237905834|gb|EEP80235.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Uncinocarpus reesii
1704]
Length = 532
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/445 (74%), Positives = 378/445 (84%), Gaps = 5/445 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q P PPP + H GGLKD DRIF NLYG H P LK AMK GDW++TK+++LKG DW
Sbjct: 65 ATVQDPAAVPPP-RVH-GGLKDRDRIFQNLYGRHGPDLKNAMKTGDWYKTKEILLKGHDW 122
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D RP YLVVNADE EPGTCKDREIMR
Sbjct: 123 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDREIMR 182
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M A+AAYIYIRGE+ E L+RA EAY AGL+GKNACGSGYD
Sbjct: 183 KDPHKLVEGCLVAGRAMNATAAYIYIRGEFYEEATVLQRAINEAYEAGLIGKNACGSGYD 242
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FD++IH G GAYICGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 243 FDIYIHRGMGAYICGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 302
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKL+C+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWD
Sbjct: 303 TICRRGGKWFASFGRERNQGTKLYCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWD 362
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKH+CDD +MD+DALK QSGLGTAAVIVMDKSTDVV AI+RLSY
Sbjct: 363 NLLAVIPGGSSTPILPKHVCDDQIMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSY 422
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W IM+R + G A+ EIDMLQE+TKQ+EGH+ICALG+A A
Sbjct: 423 FYKHESCGQCTPCREGSKWTMQIMQRFERGQAREREIDMLQELTKQVEGHSICALGEAFA 482
Query: 456 WPVQGLIRHFRPELERRIKEHAERE 480
WP+QGLIRHFRPELE RI++ AE++
Sbjct: 483 WPIQGLIRHFRPELEARIQKFAEQQ 507
>gi|118367869|ref|XP_001017144.1| NADH-quinone oxidoreductase, F subunit family protein [Tetrahymena
thermophila]
gi|89298911|gb|EAR96899.1| NADH-quinone oxidoreductase, F subunit family protein [Tetrahymena
thermophila SB210]
Length = 474
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/433 (75%), Positives = 382/433 (88%), Gaps = 2/433 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G LKD+DRIFTNLY DPF+KGA+KRGDWH+TK+++ G +WI++E+KKSGLRGRGGA
Sbjct: 32 YGNLKDQDRIFTNLYRDGDPFVKGALKRGDWHQTKEILSNGPEWIIDEIKKSGLRGRGGA 91
Query: 115 GFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMR 173
GF SGLK+SFMPKV+ DGRPSYLV+N+DESEPGTCKDREI+R+DPHKL+EG L+ G MR
Sbjct: 92 GFLSGLKYSFMPKVNPDGRPSYLVINSDESEPGTCKDREILRNDPHKLVEGALVVGFSMR 151
Query: 174 ASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEET 233
A AAYIYIRGE+ E L++A EAYA G +GKNACGSGYDFDV+IH GAGAYICGEET
Sbjct: 152 ARAAYIYIRGEFWVEANILQQAIDEAYAKGFIGKNACGSGYDFDVYIHRGAGAYICGEET 211
Query: 234 ALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNN 293
L+ES+EGK G+PR+KPPFPANAGLYGCPTTVTNVETVAV PTI+RRG WFASFGR NN
Sbjct: 212 GLIESIEGKAGQPRVKPPFPANAGLYGCPTTVTNVETVAVCPTIMRRGASWFASFGRPNN 271
Query: 294 SGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKH 353
+GTKL+C+SGHVN PCTVEEEMSIPL+EL+++HCGGVRGGWDNLLAVIPGGSSVP++PK+
Sbjct: 272 AGTKLYCISGHVNNPCTVEEEMSIPLRELLEKHCGGVRGGWDNLLAVIPGGSSVPMMPKN 331
Query: 354 ICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTG 413
+CDDVLMD+DALKAV SGLGTAAVIVMDKSTD +DAI RLS FYKHESCGQCTPCREGTG
Sbjct: 332 VCDDVLMDFDALKAVGSGLGTAAVIVMDKSTDPIDAILRLSKFYKHESCGQCTPCREGTG 391
Query: 414 WLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
W+ +MERL VGNA EIDMLQ+VT+QIE HTICALGDAAAWPVQGLI++FR E+E RI
Sbjct: 392 WIVDVMERLLVGNADYAEIDMLQQVTQQIEMHTICALGDAAAWPVQGLIKNFREEIEDRI 451
Query: 474 KE-HAERELLEAT 485
HA+ L+ +
Sbjct: 452 DSYHAKHPQLKKS 464
>gi|289743527|gb|ADD20511.1| NADH dehydrogenase flavoprotein 1 ubiquinone [Glossina morsitans
morsitans]
Length = 474
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/428 (76%), Positives = 369/428 (86%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
KT FG L D+DRIFTNLYG HD L GA+KRGDW++TK++VLKGADWI+NE+K SGLRGR
Sbjct: 44 KTKFGPLADQDRIFTNLYGRHDWRLNGALKRGDWYKTKEIVLKGADWIINEIKTSGLRGR 103
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFPSG+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG
Sbjct: 104 GGAGFPSGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRA 163
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ NE N++ A EAY AGL+GKNACGSGYDFDV +H GAGAYICGE
Sbjct: 164 MGANAAYIYIRGEFYNEASNMQIAIAEAYQAGLIGKNACGSGYDFDVFMHRGAGAYICGE 223
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAV+P I RRG WFASFGR
Sbjct: 224 ETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPAICRRGGAWFASFGRT 283
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NSGTKLF +SGHVN PCTVEEEMSI LKELI+RH GGV GGW+NLLAVIPGGSS PL+P
Sbjct: 284 RNSGTKLFNISGHVNTPCTVEEEMSITLKELIERHAGGVCGGWENLLAVIPGGSSTPLIP 343
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +CDD +MD+D L A Q+ LGTAA+IVMDKSTD++ AIARL FYKHESCGQCTPCREG
Sbjct: 344 KKVCDDAIMDFDGLIAAQTSLGTAAIIVMDKSTDIIKAIARLIEFYKHESCGQCTPCREG 403
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
GW+ IM R GNA+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E
Sbjct: 404 IGWMNKIMARFVSGNAQAAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEA 463
Query: 472 RIKEHAER 479
R+K+++ +
Sbjct: 464 RMKKYSAK 471
>gi|427789449|gb|JAA60176.1| Putative nadh:ubiquinone oxidoreductase ndufv1/51kda subunit
[Rhipicephalus pulchellus]
Length = 478
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/424 (77%), Positives = 370/424 (87%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
KT FG LKDEDRIF NLYG HD LKGAM RGDW++TK++VLKG DWI++E+KKSGLRGR
Sbjct: 46 KTKFGPLKDEDRIFQNLYGRHDWRLKGAMSRGDWYKTKEIVLKGPDWIIDEIKKSGLRGR 105
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFPSGLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG
Sbjct: 106 GGAGFPSGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGRA 165
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV++H GAGAYICGE
Sbjct: 166 MGACAAYIYIRGEFYNEASNLQIAIREAYQAGLIGKNACGSGYDFDVYVHRGAGAYICGE 225
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAVSPTI RRG +WFASFGR
Sbjct: 226 ETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVSPTICRRGGEWFASFGRT 285
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGV GGWDNLL VIPGGSS P++P
Sbjct: 286 RNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIP 345
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +CDDVLMD+DAL A Q+GLGTAAVIVM++ TD++ AIARL FYKHESCGQCTPCREG
Sbjct: 346 KSVCDDVLMDFDALVAAQTGLGTAAVIVMNRQTDIIRAIARLIEFYKHESCGQCTPCREG 405
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
WL IM R G+A++EEIDM+ E++KQIEGHTICALGD AAWPVQGLIRHFRP +E
Sbjct: 406 VTWLNKIMPRFVSGDARVEEIDMIYELSKQIEGHTICALGDGAAWPVQGLIRHFRPVIEE 465
Query: 472 RIKE 475
RI++
Sbjct: 466 RIQQ 469
>gi|66805535|ref|XP_636489.1| ubiquinone oxidoreductase [Dictyostelium discoideum AX4]
gi|74852419|sp|Q54I90.1|NDUV1_DICDI RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; AltName: Full=NADH-ubiquinone
oxidoreductase 51 kDa subunit; Flags: Precursor
gi|60464845|gb|EAL62961.1| ubiquinone oxidoreductase [Dictyostelium discoideum AX4]
Length = 479
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/453 (73%), Positives = 379/453 (83%), Gaps = 1/453 (0%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
+ GL Q A+ +GGLKD+DRIFTNLYG HD +LKGA+ RG
Sbjct: 17 TTGLTGKDFQATKVATFSTAQVQQAQENVRSYGGLKDKDRIFTNLYGEHDVYLKGAIARG 76
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADE 142
DW++TK+++ KG DWI+ E+ SGLRGRGGAGFPSGLKWSFMPK S RP YLV+NADE
Sbjct: 77 DWYKTKNIIDKGKDWILKEMMASGLRGRGGAGFPSGLKWSFMPKTTSKDRPQYLVINADE 136
Query: 143 SEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAA 202
EPGTCKDREIMRHDPHKL+EGCL+AG MRA AAYIYIRGE+ E K LE+A EAY A
Sbjct: 137 GEPGTCKDREIMRHDPHKLIEGCLLAGFAMRACAAYIYIRGEFHYEAKVLEQAIDEAYKA 196
Query: 203 GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP 262
GL+G+NACG+GY FDV++H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA AGLYGCP
Sbjct: 197 GLIGENACGTGYKFDVYVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPAMAGLYGCP 256
Query: 263 TTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKEL 322
TTVTNVETVAV+PTILRRG WFASFGR N+GTKLFC+SGHVN PCTVEEEMSIPL+EL
Sbjct: 257 TTVTNVETVAVAPTILRRGGAWFASFGRPKNAGTKLFCISGHVNNPCTVEEEMSIPLREL 316
Query: 323 IDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDK 382
ID+HCGGV GGWDNL VIPGGSSVP+LPK+ICD+VLMD+D L+ +SGLGTAAVIVM+K
Sbjct: 317 IDKHCGGVIGGWDNLKGVIPGGSSVPVLPKNICDNVLMDFDDLRQHRSGLGTAAVIVMNK 376
Query: 383 STDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI 442
TD++ AIARLS FYKHESCGQCTPCREG GWL+ I +RL GNAK +EID L+E+++QI
Sbjct: 377 ETDMIAAIARLSKFYKHESCGQCTPCREGVGWLYDITDRLVTGNAKPDEIDSLEEISRQI 436
Query: 443 EGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
EGHTICALGDAAAWPVQGLIRHFRPE+E RIK+
Sbjct: 437 EGHTICALGDAAAWPVQGLIRHFRPEIEDRIKQ 469
>gi|403354210|gb|EJY76658.1| NADH-quinone oxidoreductase, F subunit family protein [Oxytricha
trifallax]
Length = 736
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/427 (74%), Positives = 373/427 (87%), Gaps = 2/427 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
+K H GGL D+DRIFTNLY DPF++GA+KRGDWHRTKD++ G DWI++E+KKSGLRG
Sbjct: 290 KKVH-GGLSDQDRIFTNLYRDGDPFIQGALKRGDWHRTKDILTMGQDWIIDEIKKSGLRG 348
Query: 111 RGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
RGGAGFPSGLK+SFMPKVS DGRPSYLV+N+DESEPGTCKDREI+RHDPHKL+EG LI G
Sbjct: 349 RGGAGFPSGLKYSFMPKVSPDGRPSYLVINSDESEPGTCKDREILRHDPHKLVEGALIVG 408
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
MRA AAYIY+RGE+ +E L++A EAY G LGKNACGSGYDFDV++H GAGAYIC
Sbjct: 409 FSMRAKAAYIYVRGEFWDEANQLQQAVNEAYKKGFLGKNACGSGYDFDVYVHGGAGAYIC 468
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEE+AL+ESLEGK G+PRLKPPFPAN+GLYGCPTTVTNVETVAV PTI+RRG WF+SFG
Sbjct: 469 GEESALIESLEGKPGRPRLKPPFPANSGLYGCPTTVTNVETVAVCPTIMRRGASWFSSFG 528
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ N+GTKLFC+SGHVN P TVEEEMSIPL+ELIDRH GGV GGWDNL A+IPGGSSVP+
Sbjct: 529 REKNAGTKLFCISGHVNNPITVEEEMSIPLRELIDRHAGGVIGGWDNLKAIIPGGSSVPM 588
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
L + IC++VLMD+D LK +SGLGTAAVIVM++ TDV+DAI RL+ FYKHESCGQCTPCR
Sbjct: 589 LTRKICNEVLMDFDDLKDRKSGLGTAAVIVMNEQTDVIDAILRLAKFYKHESCGQCTPCR 648
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGW+ ++ER+K GNA EIDML+E++ QIEGHTICALGDAAAWPVQGLIR+FR E+
Sbjct: 649 EGTGWMVDLLERIKTGNADFAEIDMLEELSYQIEGHTICALGDAAAWPVQGLIRNFRHEM 708
Query: 470 ERRIKEH 476
E RI +
Sbjct: 709 EDRIDSY 715
>gi|261199832|ref|XP_002626317.1| NADH oxidoreductase F subunit [Ajellomyces dermatitidis SLH14081]
gi|239594525|gb|EEQ77106.1| NADH oxidoreductase F subunit [Ajellomyces dermatitidis SLH14081]
gi|239607916|gb|EEQ84903.1| NADH oxidoreductase F subunit [Ajellomyces dermatitidis ER-3]
gi|327357999|gb|EGE86856.1| NADH oxidoreductase F subunit [Ajellomyces dermatitidis ATCC 18188]
Length = 518
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/443 (73%), Positives = 376/443 (84%), Gaps = 5/443 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q PPP +GGLKD+DRIF NLYG H LK AMK GDW++TK+++LKG DW
Sbjct: 51 ATVQDATATPPPRA--YGGLKDQDRIFQNLYGNHGADLKTAMKFGDWYKTKEIMLKGHDW 108
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR
Sbjct: 109 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMR 168
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M A+AAYIYIRGE+ NE +++RA QEAY AGL+GKNACGSGYD
Sbjct: 169 KDPHKLIEGCLVAGRAMNATAAYIYIRGEFYNEATSVQRAIQEAYQAGLIGKNACGSGYD 228
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV++H G GAYICGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVETVAV+P
Sbjct: 229 FDVYLHRGMGAYICGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVANVETVAVAP 288
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI+RHCGGVRGGWD
Sbjct: 289 TICRRGGKWFASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWD 348
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKH+CDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS
Sbjct: 349 NLLAVIPGGSSTPILPKHVCDDQLMDFDALKDAQSGLGTAAVIVMDKSTDVVAAISRLSA 408
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W + +M+R + G A+ EIDMLQE+TKQ+EGHTICALG+A A
Sbjct: 409 FYKHESCGQCTPCREGSKWTYQMMKRFESGQAREREIDMLQELTKQVEGHTICALGEAFA 468
Query: 456 WPVQGLIRHFRPELERRIKEHAE 478
WP+QGLIRHFRPELE RI+++ +
Sbjct: 469 WPIQGLIRHFRPELEARIRKYEQ 491
>gi|346472433|gb|AEO36061.1| hypothetical protein [Amblyomma maculatum]
Length = 477
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/424 (77%), Positives = 369/424 (87%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
KT FG LKDEDRIF NLYG HD LKGAM RGDW++TK++VLKG DWI++E+KKSGLRGR
Sbjct: 45 KTKFGPLKDEDRIFQNLYGRHDWRLKGAMSRGDWYKTKEIVLKGPDWIIDEIKKSGLRGR 104
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFPSGLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG
Sbjct: 105 GGAGFPSGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGRA 164
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV +H GAGAYICGE
Sbjct: 165 MGACAAYIYIRGEFYNEASNLQIAIREAYQAGLIGKNACGSGYDFDVFVHRGAGAYICGE 224
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAVSPTI RRG +WFASFGR
Sbjct: 225 ETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVSPTICRRGGEWFASFGRT 284
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGV GGWDNLL +IPGGSS P++P
Sbjct: 285 RNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGVIGGWDNLLGIIPGGSSTPVIP 344
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +CDDVLMD+DAL A Q+GLGTAAVIVM+K TD++ AIARL FYKHESCGQCTPCREG
Sbjct: 345 KSVCDDVLMDFDALVAAQTGLGTAAVIVMNKQTDIIRAIARLIEFYKHESCGQCTPCREG 404
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
WL IM R G+A++EEIDM+ E++KQIEGHTICALGD AAWPVQGLIRHFRP +E
Sbjct: 405 VTWLNKIMPRFVSGDARVEEIDMIYELSKQIEGHTICALGDGAAWPVQGLIRHFRPVIED 464
Query: 472 RIKE 475
RI++
Sbjct: 465 RIRQ 468
>gi|17531727|ref|NP_496376.1| Protein NUO-1 [Caenorhabditis elegans]
gi|3874218|emb|CAA90435.1| Protein NUO-1 [Caenorhabditis elegans]
Length = 479
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/450 (74%), Positives = 373/450 (82%)
Query: 37 TASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA 96
++ Q EKT FG LKD DRIFTNLYG HD LKGAM RGDWH+TK+++LKG+
Sbjct: 25 VVTSAQNANAQVKQEKTSFGNLKDSDRIFTNLYGRHDYRLKGAMARGDWHKTKEIILKGS 84
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
DWI+ E+K SGLRGRGGAGFPSG+KW FM K DGRP YLVVNADE EPGTCKDREIMRH
Sbjct: 85 DWILGELKTSGLRGRGGAGFPSGMKWGFMNKPFDGRPKYLVVNADEGEPGTCKDREIMRH 144
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
DPHKL+EGCLI GV M A AAYIYIRGE+ NE L+ A EAY AG LGK+ G+GY+F
Sbjct: 145 DPHKLIEGCLIGGVAMGARAAYIYIRGEFYNEACILQEAINEAYKAGYLGKDCLGTGYNF 204
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
DV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PT
Sbjct: 205 DVFVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVAPT 264
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I RRG DWFASFGR+ N GTKLFC+SG VN PCTVEEEMS+PLK+LI+RHCGGV GGWDN
Sbjct: 265 ICRRGGDWFASFGRERNRGTKLFCISGQVNNPCTVEEEMSVPLKDLIERHCGGVIGGWDN 324
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
LLA+IPGGSSVPL+PK++CD VLMD+DAL A QSGLGTAAVIVM+K TD+V IARLS F
Sbjct: 325 LLAIIPGGSSVPLMPKNVCDTVLMDFDALVAAQSGLGTAAVIVMNKQTDIVKCIARLSLF 384
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
YKHESCGQCTPCREG WL +M R G AK EIDM+ E++KQIEGHTICALGDAAAW
Sbjct: 385 YKHESCGQCTPCREGCNWLNKMMWRFVDGKAKPSEIDMMWELSKQIEGHTICALGDAAAW 444
Query: 457 PVQGLIRHFRPELERRIKEHAERELLEATA 486
PVQGLIRHFRPELERR+ E ++ L E A
Sbjct: 445 PVQGLIRHFRPELERRMAEFHKQVLAEQGA 474
>gi|407920146|gb|EKG13364.1| NADH:ubiquinone oxidoreductase 51kDa subunit conserved site
[Macrophomina phaseolina MS6]
Length = 507
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/440 (75%), Positives = 376/440 (85%), Gaps = 4/440 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P + H GGLKD+DRIF NLY H LK AMK GDW++TK+++LKG DWI++E+K SGLR
Sbjct: 51 PVQRH-GGLKDQDRIFQNLYSHHGADLKSAMKYGDWYKTKEIILKGHDWIISEIKASGLR 109
Query: 110 GRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 110 GRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCL 169
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACGSGYDFDV++H G GA
Sbjct: 170 VAGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYQAGLIGKNACGSGYDFDVYVHRGMGA 229
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+PTI RRG DWFA
Sbjct: 230 YVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAPTICRRGGDWFA 289
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ NSGTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGVRGGWDNL AVIPGGSS
Sbjct: 290 SFGRERNSGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVRGGWDNLKAVIPGGSS 349
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P+LPKH+CDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS FYKHESCGQCT
Sbjct: 350 TPILPKHVCDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSKFYKHESCGQCT 409
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ W + IM R + G A+ EIDM+QE+TKQ+EGHTICALG+A AWP+QGLIRHFR
Sbjct: 410 PCREGSKWTYQIMNRFEKGQARAREIDMIQELTKQVEGHTICALGEAFAWPIQGLIRHFR 469
Query: 467 PELERRIKEHAERELLEATA 486
PELE RIK++AE+ EA A
Sbjct: 470 PELEARIKDYAEKNGGEALA 489
>gi|320039567|gb|EFW21501.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Coccidioides
posadasii str. Silveira]
Length = 529
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/444 (74%), Positives = 379/444 (85%), Gaps = 5/444 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q P PPP + H GGLKD+DRIF NLYG H P LK AMK GDW++TK+++LKG DW
Sbjct: 62 ATVQDPAAVPPP-RVH-GGLKDQDRIFQNLYGRHGPDLKNAMKCGDWYKTKEILLKGHDW 119
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D RP YLVVNADE EPGTCKDREIMR
Sbjct: 120 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDREIMR 179
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+RA EAY AGL+GKNACGSGYD
Sbjct: 180 KDPHKLVEGCLVAGRAMNATAAYIYIRGEFYHEATILQRAINEAYEAGLIGKNACGSGYD 239
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FD++IH G GAYICGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 240 FDIYIHRGMGAYICGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 299
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKL+C+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWD
Sbjct: 300 TICRRGGKWFASFGRERNQGTKLYCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWD 359
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKH+CDD +MD+DALK QSGLGTAAVIVMDKSTDVV AI+RLSY
Sbjct: 360 NLLAVIPGGSSTPILPKHVCDDQIMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSY 419
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W IM+R + G A+ EIDMLQE+TKQ+EGHTICALG+A A
Sbjct: 420 FYKHESCGQCTPCREGSKWTMQIMQRFERGQAREREIDMLQELTKQVEGHTICALGEAFA 479
Query: 456 WPVQGLIRHFRPELERRIKEHAER 479
WP+QGLIRHFRPELE RI++ A++
Sbjct: 480 WPIQGLIRHFRPELEARIQKFAQQ 503
>gi|303311397|ref|XP_003065710.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105372|gb|EER23565.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 529
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/444 (74%), Positives = 379/444 (85%), Gaps = 5/444 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q P PPP + H GGLKD+DRIF NLYG H P LK AMK GDW++TK+++LKG DW
Sbjct: 62 ATVQDPAAVPPP-RVH-GGLKDQDRIFQNLYGRHGPDLKNAMKCGDWYKTKEILLKGHDW 119
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D RP YLVVNADE EPGTCKDREIMR
Sbjct: 120 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDREIMR 179
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+RA EAY AGL+GKNACGSGYD
Sbjct: 180 KDPHKLVEGCLVAGRAMNATAAYIYIRGEFYHEATILQRAINEAYEAGLIGKNACGSGYD 239
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FD++IH G GAYICGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 240 FDIYIHRGMGAYICGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 299
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKL+C+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWD
Sbjct: 300 TICRRGGKWFASFGRERNQGTKLYCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWD 359
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKH+CDD +MD+DALK QSGLGTAAVIVMDKSTDVV AI+RLSY
Sbjct: 360 NLLAVIPGGSSTPILPKHVCDDQIMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSY 419
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W IM+R + G A+ EIDMLQE+TKQ+EGHTICALG+A A
Sbjct: 420 FYKHESCGQCTPCREGSKWTMQIMQRFERGQAREREIDMLQELTKQVEGHTICALGEAFA 479
Query: 456 WPVQGLIRHFRPELERRIKEHAER 479
WP+QGLIRHFRPELE RI++ A++
Sbjct: 480 WPIQGLIRHFRPELEARIQKFAQQ 503
>gi|195434685|ref|XP_002065333.1| GK15392 [Drosophila willistoni]
gi|194161418|gb|EDW76319.1| GK15392 [Drosophila willistoni]
Length = 478
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/431 (75%), Positives = 370/431 (85%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA+KRGDW++TK++VLKG DWI+NE+K SGLRGRGGA
Sbjct: 47 FGPLADEDRIFTNLYGRHDWRLKGALKRGDWYKTKEIVLKGPDWIINEIKTSGLRGRGGA 106
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDR+IMRHDPHKL+EGCLIAG M A
Sbjct: 107 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDRDIMRHDPHKLVEGCLIAGRAMGA 166
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGL+GKNACG+GYDFDV +H GAGAYICGEETA
Sbjct: 167 QAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGTGYDFDVFMHRGAGAYICGEETA 226
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAV+P+I RRG WFASFGR NS
Sbjct: 227 LIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPSICRRGGPWFASFGRTRNS 286
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHV PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++PK +
Sbjct: 287 GTKLFNISGHVKNPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKSV 346
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG GW
Sbjct: 347 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGW 406
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 407 MNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 466
Query: 475 EHAERELLEAT 485
HA ++ A+
Sbjct: 467 LHAGQQTKRAS 477
>gi|119194275|ref|XP_001247741.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Coccidioides immitis RS]
gi|392863015|gb|EAS36290.2| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
[Coccidioides immitis RS]
Length = 529
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/444 (74%), Positives = 379/444 (85%), Gaps = 5/444 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q P PPP + H GGLKD+DRIF NLYG H P LK AMK GDW++TK+++LKG DW
Sbjct: 62 ATVQDPAAVPPP-RVH-GGLKDQDRIFQNLYGRHGPDLKNAMKCGDWYKTKEILLKGHDW 119
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D RP YLVVNADE EPGTCKDREIMR
Sbjct: 120 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDREIMR 179
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+RA EAY AGL+GKNACGSGYD
Sbjct: 180 KDPHKLVEGCLVAGRAMNATAAYIYIRGEFYHEATILQRAINEAYEAGLIGKNACGSGYD 239
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FD++IH G GAYICGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 240 FDIYIHRGMGAYICGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 299
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKL+C+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWD
Sbjct: 300 TICRRGGKWFASFGRERNQGTKLYCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWD 359
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKH+CDD +MD+DALK QSGLGTAAVIVMDKSTDVV AI+RLSY
Sbjct: 360 NLLAVIPGGSSTPILPKHVCDDQIMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSY 419
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W IM+R + G A+ EIDMLQE+TKQ+EGHTICALG+A A
Sbjct: 420 FYKHESCGQCTPCREGSKWTMQIMQRFERGQAREREIDMLQELTKQVEGHTICALGEAFA 479
Query: 456 WPVQGLIRHFRPELERRIKEHAER 479
WP+QGLIRHFRPELE RI++ A++
Sbjct: 480 WPIQGLIRHFRPELEARIQKFAQQ 503
>gi|154298519|ref|XP_001549682.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Botryotinia
fuckeliana B05.10]
gi|347440644|emb|CCD33565.1| similar to NADH-ubiquinone oxidoreductase 51 kDa subunit
[Botryotinia fuckeliana]
Length = 509
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/437 (73%), Positives = 374/437 (85%), Gaps = 3/437 (0%)
Query: 47 PPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKS 106
PPPP+KT +GGL+D+DRIF NLYG H L A K GDWHRTKD++ KG DWI++E+K S
Sbjct: 49 PPPPKKTQWGGLRDQDRIFQNLYGHHGADLASAKKYGDWHRTKDILAKGHDWIISEIKAS 108
Query: 107 GLRGRGGAGFPSGLKWSFMPKV---SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLE 163
GLRGRGGAGFPSG+KWSFM +D +P YLVVNADE EPGTCKDREIMR DPHKL+E
Sbjct: 109 GLRGRGGAGFPSGMKWSFMNFKGWENDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLIE 168
Query: 164 GCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYG 223
GCL+AG M +AAYIYIRGE+ +E L+RA QEAY GL+GKNACGSGYDFDV++H G
Sbjct: 169 GCLVAGRAMNCTAAYIYIRGEFYHEATVLQRAIQEAYKDGLIGKNACGSGYDFDVYVHRG 228
Query: 224 AGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPD 283
GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG D
Sbjct: 229 MGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGD 288
Query: 284 WFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPG 343
WFASFGR+ N+GTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGVRGGWDNL AVIPG
Sbjct: 289 WFASFGRERNAGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVRGGWDNLKAVIPG 348
Query: 344 GSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCG 403
GSS P+LPK +CDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCG
Sbjct: 349 GSSTPILPKDVCDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCG 408
Query: 404 QCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIR 463
QCTPCREG+ W IM+R + G ++ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIR
Sbjct: 409 QCTPCREGSKWTEQIMKRFEKGQGRVREIDMLQELTKQVEGHTICALGEAFAWPIQGLIR 468
Query: 464 HFRPELERRIKEHAERE 480
HFRPELE R+K++AE+
Sbjct: 469 HFRPELEARMKDYAEKN 485
>gi|384501013|gb|EIE91504.1| NADH dehydrogenase [ubiquinone] flavoprotein 1 [Rhizopus delemar RA
99-880]
Length = 457
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/446 (74%), Positives = 379/446 (84%), Gaps = 7/446 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
R+F+++ A P P KT FGGL DEDRIFTN+Y HD LKGA+KRGDW++
Sbjct: 10 RTFASEAAPN------PNANPITGKTSFGGLSDEDRIFTNVYSKHDYKLKGALKRGDWYK 63
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TK+LVLKG +WI+NE+K+SGLRGRGGAGFP+GLKWSFM K DGRP YLV+NADE EPGT
Sbjct: 64 TKELVLKGPEWIINEMKESGLRGRGGAGFPTGLKWSFMNKPLDGRPRYLVINADEGEPGT 123
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREI+R DPHKL+EGCL+AG M+A+AAYIYIRGE+ E +L+ A EAY AGL+GK
Sbjct: 124 CKDREILRGDPHKLIEGCLVAGSAMKANAAYIYIRGEFYQEATHLQTAINEAYEAGLIGK 183
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFDV+IH GAGAYICGEET+L+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTN
Sbjct: 184 NACGSGYDFDVYIHRGAGAYICGEETSLIESIEGKQGKPRLKPPFPADIGLFGCPTTVTN 243
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAV+PTILRRG WFA FGR NSGTKLFC+SGHVN PCTVEEEMSIPLKELI++HC
Sbjct: 244 VETVAVAPTILRRGGSWFAGFGRPRNSGTKLFCISGHVNNPCTVEEEMSIPLKELIEKHC 303
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNLL +IPGGSSVP+LPK ICDDVLMD+DAL+ SGLGT AVIVMDKSTD+V
Sbjct: 304 GGVRGGWDNLLGIIPGGSSVPVLPKSICDDVLMDFDALRDANSGLGT-AVIVMDKSTDIV 362
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
AI+R + FY+HESCGQCTPCREGT WL +M+R + G EEID + E+TKQIEGHTI
Sbjct: 363 RAISRFAKFYRHESCGQCTPCREGTKWLESMMDRFEDGRGHKEEIDQIWELTKQIEGHTI 422
Query: 448 CALGDAAAWPVQGLIRHFRPELERRI 473
CALGDAAAWPVQGLIRHFRPELE R+
Sbjct: 423 CALGDAAAWPVQGLIRHFRPELEERM 448
>gi|226528477|ref|NP_001141461.1| uncharacterized protein LOC100273571 [Zea mays]
gi|194704660|gb|ACF86414.1| unknown [Zea mays]
Length = 504
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/460 (72%), Positives = 383/460 (83%), Gaps = 15/460 (3%)
Query: 22 RLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMK 81
RLS RSF+T +A P+KT +GGLKD+DRIFTNLYG H LK AMK
Sbjct: 31 RLSTTTRSFATVQDGSA-----------PKKT-YGGLKDQDRIFTNLYGHHGTDLKSAMK 78
Query: 82 RGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVV 138
GDWH+TK+++LKG DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVV
Sbjct: 79 YGDWHKTKEMILKGHDWLISEIKASGLRGRGGAGFPSGLKYSFMNFKDWDKDSRPRYLVV 138
Query: 139 NADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQE 198
NADE EPGTCKDREIMR DP KL+EGCL+ G M A+AAYIYIRGE+ +E L+RA QE
Sbjct: 139 NADEGEPGTCKDREIMRKDPQKLIEGCLVVGRAMNATAAYIYIRGEFYHEATTLQRAIQE 198
Query: 199 AYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGL 258
AY AGL+GKNACGSGYDFDV++H GAGAY+CGEET+L+ESLEGK GKPRLKPPFPA GL
Sbjct: 199 AYQAGLIGKNACGSGYDFDVYLHRGAGAYVCGEETSLIESLEGKAGKPRLKPPFPAAVGL 258
Query: 259 YGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIP 318
+GCP+TVTNVETVAV PTI+RRG WFA FGR+ N GTKLFC+SGHVN PCTVEEEMSIP
Sbjct: 259 FGCPSTVTNVETVAVVPTIVRRGASWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMSIP 318
Query: 319 LKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVI 378
L+ELIDRHCGGVRGGWDNLLAVIPGGSS P+LPK+ICD+ LMD+DALK QSGLGTAAVI
Sbjct: 319 LRELIDRHCGGVRGGWDNLLAVIPGGSSTPILPKNICDEQLMDFDALKDSQSGLGTAAVI 378
Query: 379 VMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEV 438
VMDKSTDVV AI+RLS+FY+HESCGQCTPCREG+ W IM R++ G A+ EIDMLQE+
Sbjct: 379 VMDKSTDVVRAISRLSHFYRHESCGQCTPCREGSKWTQQIMHRMEHGQAREREIDMLQEL 438
Query: 439 TKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RIK++ +
Sbjct: 439 TKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIKKYEQ 478
>gi|225559879|gb|EEH08161.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus G186AR]
gi|225559929|gb|EEH08211.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus G186AR]
Length = 512
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/443 (74%), Positives = 374/443 (84%), Gaps = 6/443 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q PP +GGLKD+DRIF NLYG H LK AMK GDW+RTKD+VLKG DW
Sbjct: 46 ATVQDAAASPP---RTYGGLKDQDRIFQNLYGHHGADLKTAMKYGDWYRTKDIVLKGHDW 102
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR
Sbjct: 103 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMR 162
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACGSGYD
Sbjct: 163 KDPHKLIEGCLVAGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYQAGLIGKNACGSGYD 222
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV++H G GAYICGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 223 FDVYLHRGMGAYICGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 282
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI+RHCGGVRGGWD
Sbjct: 283 TICRRGGKWFASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWD 342
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKHICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS
Sbjct: 343 NLLAVIPGGSSTPILPKHICDDQLMDFDALKDAQSGLGTAAVIVMDKSTDVVAAISRLSA 402
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W +M+R + G A+ EIDMLQE+TKQ+EGHTICALG+A A
Sbjct: 403 FYKHESCGQCTPCREGSKWTMQMMQRFERGQAREREIDMLQELTKQVEGHTICALGEAFA 462
Query: 456 WPVQGLIRHFRPELERRIKEHAE 478
WP+QGLIRHFRPELE RI+++ +
Sbjct: 463 WPIQGLIRHFRPELEARIRKYEQ 485
>gi|325089901|gb|EGC43211.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus H88]
Length = 512
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/443 (74%), Positives = 374/443 (84%), Gaps = 6/443 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q PP +GGLKD+DRIF NLYG H LK AMK GDW+RTKD+VLKG DW
Sbjct: 46 ATVQDAAASPP---RTYGGLKDQDRIFQNLYGHHGADLKTAMKYGDWYRTKDIVLKGHDW 102
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR
Sbjct: 103 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMR 162
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACGSGYD
Sbjct: 163 KDPHKLIEGCLVAGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYQAGLIGKNACGSGYD 222
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV++H G GAYICGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 223 FDVYLHRGMGAYICGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 282
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI+RHCGGVRGGWD
Sbjct: 283 TICRRGGKWFASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWD 342
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKHICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS
Sbjct: 343 NLLAVIPGGSSTPILPKHICDDQLMDFDALKDAQSGLGTAAVIVMDKSTDVVAAISRLSA 402
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W +M+R + G A+ EIDMLQE+TKQ+EGHTICALG+A A
Sbjct: 403 FYKHESCGQCTPCREGSKWTMQMMQRFERGQAREREIDMLQELTKQVEGHTICALGEAFA 462
Query: 456 WPVQGLIRHFRPELERRIKEHAE 478
WP+QGLIRHFRPELE RI+++ +
Sbjct: 463 WPIQGLIRHFRPELEARIRKYEQ 485
>gi|268532110|ref|XP_002631183.1| C. briggsae CBR-NUO-1 protein [Caenorhabditis briggsae]
Length = 479
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/450 (73%), Positives = 371/450 (82%)
Query: 37 TASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA 96
+ Q P EKT FG LKD DRIFTNLYG HD LKGA RGDW++TK+++LKG+
Sbjct: 25 VVKSAQNANTPAKQEKTSFGNLKDSDRIFTNLYGRHDYRLKGAQARGDWYKTKEIILKGS 84
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
DWI+ E+K SGLRGRGGAGFPSG+KW FM K DGRP YLVVNADE EPGTCKDREIMRH
Sbjct: 85 DWILGELKTSGLRGRGGAGFPSGMKWGFMNKPFDGRPKYLVVNADEGEPGTCKDREIMRH 144
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
DPHKL+EGCLI GV M A AAYIYIRGE+ NE L+ A EAY AG LGK+ G+GY+F
Sbjct: 145 DPHKLIEGCLIGGVAMGARAAYIYIRGEFYNEACILQEAINEAYKAGYLGKDCLGTGYNF 204
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
DV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PT
Sbjct: 205 DVFVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVAPT 264
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I RRG DWFASFGR+ N GTKLFC+SG VN PCTVEEEMS+PLK+LI+RHCGGV GGWDN
Sbjct: 265 ICRRGGDWFASFGRERNRGTKLFCISGQVNNPCTVEEEMSVPLKDLIERHCGGVIGGWDN 324
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
LLA+IPGGSSVPL+PK +CD VLMD+DAL A QSGLGTAAVIVM+K TD+V IARLS F
Sbjct: 325 LLAIIPGGSSVPLMPKSVCDTVLMDFDALVAAQSGLGTAAVIVMNKQTDIVKCIARLSLF 384
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
YKHESCGQCTPCREG WL +M R G AK EIDM+ E++KQIEGHTICALGDAAAW
Sbjct: 385 YKHESCGQCTPCREGCNWLNKMMWRFVDGKAKPSEIDMMWELSKQIEGHTICALGDAAAW 444
Query: 457 PVQGLIRHFRPELERRIKEHAERELLEATA 486
PVQGLIRHFRPELERR+ E ++ L E A
Sbjct: 445 PVQGLIRHFRPELERRMAEFHKQVLAEQGA 474
>gi|83025076|ref|NP_001032653.1| uncharacterized protein LOC641566 [Danio rerio]
Length = 479
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/430 (77%), Positives = 378/430 (87%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P KT FGGL DEDRIFTNLYG HD LKGA RGDW++TK+++LKG +WI+NE+KKSGLR
Sbjct: 40 PAKTKFGGLSDEDRIFTNLYGRHDWRLKGAEARGDWYKTKEVLLKGHEWILNEMKKSGLR 99
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG
Sbjct: 100 GRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAG 159
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A EAY AG LGKNAC SGYDFDV +H GAGAYIC
Sbjct: 160 RAMGARAAYIYIRGEFYNEGTNLQVAIHEAYKAGYLGKNACNSGYDFDVFVHRGAGAYIC 219
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GE+TAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI+RRG +WFAS G
Sbjct: 220 GEKTALIESLEGKQGKPRLKPPFPADIGVFGCPTTVANVETVAVAPTIVRRGGEWFASLG 279
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R NSGTKLF +SGHVN PCTVEEEMSIPLKEL+++H GGV GGWDNLLA+ PGGSSVP+
Sbjct: 280 RPRNSGTKLFNISGHVNNPCTVEEEMSIPLKELVEKHAGGVLGGWDNLLAITPGGSSVPM 339
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
LPK++C++VLMD+D+L A QSGLGTAAVIVM+K TDVV AIARLS FYKHESCGQCTPCR
Sbjct: 340 LPKNLCEEVLMDFDSLLAAQSGLGTAAVIVMNKQTDVVKAIARLSEFYKHESCGQCTPCR 399
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL +M R GNA+ EEIDM+ E+TKQIEGHTICALGDAAAWPVQGLIRHFRPEL
Sbjct: 400 EGTGWLTKMMYRFVDGNARPEEIDMIWELTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 459
Query: 470 ERRIKEHAER 479
ERR++E+AE+
Sbjct: 460 ERRMQEYAEK 469
>gi|328771741|gb|EGF81780.1| hypothetical protein BATDEDRAFT_31463 [Batrachochytrium
dendrobatidis JAM81]
Length = 462
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/467 (69%), Positives = 385/467 (82%), Gaps = 7/467 (1%)
Query: 15 LVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDP 74
+ C ++ L T G +T ++ P +G L D DRIFTNLYG HD
Sbjct: 1 MTACRLVSVNTPLSRVITSGLATVASSSKPAA-----TRTYGNLSDNDRIFTNLYGRHDF 55
Query: 75 FLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFM--PKVSDGR 132
L+GA KRGDW++TK+++LKG DWI++E+K SGLRGRGGAGFPSGLKWSFM P DGR
Sbjct: 56 KLEGAKKRGDWYKTKEIILKGHDWIISEMKTSGLRGRGGAGFPSGLKWSFMNKPGGPDGR 115
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+AG M A+A YIYIRGE+ NE NL
Sbjct: 116 PRYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLLAGRAMNATACYIYIRGEFYNEASNL 175
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAY AGL+GKNACGSGYDFD++IH G GAYICGEETAL+ES+EGK GKPRLKPPF
Sbjct: 176 QIAINEAYKAGLIGKNACGSGYDFDIYIHRGGGAYICGEETALIESIEGKAGKPRLKPPF 235
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GL+GCPTTV NVETVAV+PTILRRG WFA FGR+ NSGTKLFC+SGHVN PCTVE
Sbjct: 236 PADVGLFGCPTTVANVETVAVAPTILRRGGSWFAGFGRERNSGTKLFCISGHVNNPCTVE 295
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPL+ELID+HCGGVRGGWDNLL +IPGGSSVP+LP+ +C+D LMD+D+L+ +QSGL
Sbjct: 296 EEMSIPLRELIDKHCGGVRGGWDNLLGIIPGGSSVPVLPRKMCEDALMDFDSLRDMQSGL 355
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVMDKSTD+V AI+RLS FY+HESCGQCTPCREGT WL +M R + GNAK+ EI
Sbjct: 356 GTAAVIVMDKSTDIVHAISRLSAFYQHESCGQCTPCREGTTWLSNMMRRFEKGNAKVAEI 415
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
DM++E+++QIEGHTICALGDAAAWPVQGLIRHFRPE+E++I + +
Sbjct: 416 DMIEELSRQIEGHTICALGDAAAWPVQGLIRHFRPEVEKKIMQFQSK 462
>gi|1408306|gb|AAB03672.1| ndufv1 [Dictyostelium discoideum]
Length = 479
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/453 (72%), Positives = 379/453 (83%), Gaps = 1/453 (0%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
+ GL + Q A+ +GGLKD+DRIFTNLYG HD +LKGA+ RG
Sbjct: 17 TTGLTGKNFQATKVATFSTAQVQQAQENVRSYGGLKDKDRIFTNLYGEHDVYLKGAIARG 76
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADE 142
DW++TK+++ KG DWI+ E+ SGLRGRGGAGFPSGLKWSFMP+ S RP YLV+NADE
Sbjct: 77 DWYKTKNIIDKGKDWILKEMMASGLRGRGGAGFPSGLKWSFMPETTSKDRPQYLVINADE 136
Query: 143 SEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAA 202
EPGTCKDREIMRHDPHKL+EGCL+AG MRA AAYIYIRGE+ E K LE+A EAY A
Sbjct: 137 GEPGTCKDREIMRHDPHKLIEGCLLAGFAMRACAAYIYIRGEFHYEAKVLEQAIDEAYKA 196
Query: 203 GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP 262
GL+G+NACG+GY FDV++H GAGAYICGEETAL+ S+EGKQGKPRLKPPFPA AGLYGCP
Sbjct: 197 GLIGENACGTGYKFDVYVHRGAGAYICGEETALIGSIEGKQGKPRLKPPFPAMAGLYGCP 256
Query: 263 TTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKEL 322
TTVTNVETVAV+PTILRRG WFASFGR N+GTKLFC+SGHVN PCTVEEEMSIPL+EL
Sbjct: 257 TTVTNVETVAVAPTILRRGGAWFASFGRPKNAGTKLFCISGHVNNPCTVEEEMSIPLREL 316
Query: 323 IDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDK 382
ID+HCGGV GGWDNL VIPGGSSVP+LPK+ICD+VLMD+D L+ +SGLGTAAVIVM+K
Sbjct: 317 IDKHCGGVIGGWDNLKGVIPGGSSVPVLPKNICDNVLMDFDDLRQHRSGLGTAAVIVMNK 376
Query: 383 STDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI 442
TD++ AIARLS FYKHESCGQCTPCREG GWL+ I +RL GNAK +EID L+E+++QI
Sbjct: 377 ETDMIAAIARLSKFYKHESCGQCTPCREGVGWLYDITDRLVTGNAKPDEIDSLEEISRQI 436
Query: 443 EGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
EGHTICALGDAAAWPVQGLIRHFRPE+E RIK+
Sbjct: 437 EGHTICALGDAAAWPVQGLIRHFRPEIEDRIKQ 469
>gi|341888975|gb|EGT44910.1| CBN-NUO-1 protein [Caenorhabditis brenneri]
Length = 479
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/450 (73%), Positives = 373/450 (82%)
Query: 37 TASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA 96
++ Q EKT FG LKD DRIFTNLYG HD LKGA+ RGDW++TK+++LKG+
Sbjct: 25 VVTSAQNANAQVKQEKTSFGNLKDSDRIFTNLYGRHDYRLKGALSRGDWYKTKEIILKGS 84
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
DWI+ E+K SGLRGRGGAGFPSG+KW FM K DGRP YLVVNADE EPGTCKDREIMRH
Sbjct: 85 DWILGELKTSGLRGRGGAGFPSGMKWGFMNKPFDGRPKYLVVNADEGEPGTCKDREIMRH 144
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
DPHKL+EGCLI GV M A AAYIYIRGE+ NE L+ A EAY AG LGK+ G+GY+F
Sbjct: 145 DPHKLIEGCLIGGVAMGARAAYIYIRGEFYNEACILQEAINEAYKAGYLGKDCLGTGYNF 204
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
DV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PT
Sbjct: 205 DVFVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVAPT 264
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I RRG DWFASFGR+ N GTKLFC+SG VN PCTVEEEMS+PLK+LI+RHCGGV GGWDN
Sbjct: 265 ICRRGGDWFASFGRERNRGTKLFCISGQVNNPCTVEEEMSVPLKDLIERHCGGVIGGWDN 324
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
LLA+IPGGSSVPL+PK++CD VLMD+DAL A QSGLGTAAVIVM+K TD+V IARLS F
Sbjct: 325 LLAIIPGGSSVPLMPKNVCDTVLMDFDALVAAQSGLGTAAVIVMNKQTDIVKCIARLSLF 384
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
YKHESCGQCTPCREG WL +M R G AK EIDM+ E++KQIEGHTICALGDAAAW
Sbjct: 385 YKHESCGQCTPCREGCNWLNKMMWRFVDGKAKPSEIDMMWELSKQIEGHTICALGDAAAW 444
Query: 457 PVQGLIRHFRPELERRIKEHAERELLEATA 486
PVQGLIRHFRPELERR+ E ++ L E A
Sbjct: 445 PVQGLIRHFRPELERRMAEFHKQVLAEQGA 474
>gi|158299072|ref|XP_319184.4| AGAP010039-PA [Anopheles gambiae str. PEST]
gi|157014192|gb|EAA13847.5| AGAP010039-PA [Anopheles gambiae str. PEST]
Length = 472
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/434 (74%), Positives = 373/434 (85%)
Query: 47 PPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKS 106
PPP KT FG L D+DRIFTNLYG HD LKGA+KRGDW++TK+++LKG DWI+NE+K S
Sbjct: 34 PPPQTKTKFGPLADQDRIFTNLYGRHDWRLKGALKRGDWYKTKEILLKGTDWILNEMKVS 93
Query: 107 GLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GLRGRGGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL
Sbjct: 94 GLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCL 153
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
IAG M A AAYIYIRGE+ NE N++ A EAY AGL+GKNACGSGYDFDV +H GAGA
Sbjct: 154 IAGRAMGARAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGSGYDFDVFMHRGAGA 213
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV+NVETVAV+PTI RRG WFA
Sbjct: 214 YICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVSNVETVAVAPTICRRGGTWFA 273
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GG+RGGWDNLL +IPGGSS
Sbjct: 274 SFGRTRNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGIRGGWDNLLGIIPGGSS 333
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P++PK +C+DVLMD+D L Q+ LGTAA+IVMDKSTD++ AI+RL FYKHESCGQCT
Sbjct: 334 TPVIPKSVCEDVLMDFDGLVQAQTSLGTAAIIVMDKSTDIIKAISRLIMFYKHESCGQCT 393
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG W+ IM R GNA+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFR
Sbjct: 394 PCREGIAWMNKIMHRFVTGNARPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFR 453
Query: 467 PELERRIKEHAERE 480
PE+E R+K++ +++
Sbjct: 454 PEIESRMKQYEQKQ 467
>gi|296425638|ref|XP_002842347.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638611|emb|CAZ86538.1| unnamed protein product [Tuber melanosporum]
Length = 499
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/487 (69%), Positives = 389/487 (79%), Gaps = 15/487 (3%)
Query: 3 PMKGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDED 62
P GV++L + L R S + + QG+ +T P +GGLKD+D
Sbjct: 7 PQCGVIALASSHLAR------SSAIAVYRQQGSRNLATVSDTP------TRSYGGLKDQD 54
Query: 63 RIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKW 122
RIF NLYG H LK AMK GDW++TK+++LKG DWI+ E+K SGLRGRGGAGFPSG+KW
Sbjct: 55 RIFQNLYGHHGTDLKSAMKYGDWYKTKEILLKGHDWIIGEIKTSGLRGRGGAGFPSGMKW 114
Query: 123 SFM--PKVSDGR-PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYI 179
SFM P + G P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYI
Sbjct: 115 SFMTPPGWNTGTTPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRAMEATAAYI 174
Query: 180 YIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESL 239
YIRGE+ +E L+RA QEAY+AGL+GKNACGSGYDFDV +H G GAY+CGEET+L+ESL
Sbjct: 175 YIRGEFYHEATVLQRAIQEAYSAGLIGKNACGSGYDFDVFVHRGMGAYVCGEETSLIESL 234
Query: 240 EGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLF 299
EGK GKPRLKPPFPA+ GL+GCP+TV NVETV+V+PTI RRG WFASFGRK N GTKLF
Sbjct: 235 EGKPGKPRLKPPFPASVGLFGCPSTVANVETVSVAPTICRRGGSWFASFGRKRNEGTKLF 294
Query: 300 CVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVL 359
C+SGHVN PCTVEEEMSIPLKELI+RHCGGVRGGWDNL A+IPGGSS P+LP+ ICDDVL
Sbjct: 295 CISGHVNNPCTVEEEMSIPLKELIERHCGGVRGGWDNLQAIIPGGSSTPILPRKICDDVL 354
Query: 360 MDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIM 419
MD+DALK VQSGLGTAAVIVMDKSTDVV AI+RLS FYKHESCGQCTPCREGT W IM
Sbjct: 355 MDFDALKDVQSGLGTAAVIVMDKSTDVVRAISRLSKFYKHESCGQCTPCREGTRWTAQIM 414
Query: 420 ERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
ER + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE R++ HA+
Sbjct: 415 ERFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPLQGLIRHFRPELEARMQAHAQA 474
Query: 480 ELLEATA 486
EA A
Sbjct: 475 SGGEALA 481
>gi|242769552|ref|XP_002341788.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724984|gb|EED24401.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Talaromyces
stipitatus ATCC 10500]
Length = 497
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/430 (75%), Positives = 369/430 (85%), Gaps = 3/430 (0%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
K +GGLKD+DRIFTNLYG H LK AMK GDWH+TK+++LKG DW+++E+K SGLRGR
Sbjct: 42 KRQYGGLKDQDRIFTNLYGHHGTDLKSAMKYGDWHKTKEMILKGHDWLISEIKASGLRGR 101
Query: 112 GGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
GGAGFPSGLK+SFM D RP YLVVNADE EPGTCKDREIMR DP KL+EGCL+
Sbjct: 102 GGAGFPSGLKYSFMNFKDWDKDSRPRYLVVNADEGEPGTCKDREIMRKDPQKLIEGCLVV 161
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
G M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACG+GYDFDV++H GAGAY+
Sbjct: 162 GRAMNATAAYIYIRGEFYHEATTLQRAIQEAYQAGLIGKNACGTGYDFDVYLHRGAGAYV 221
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV PTI+RRG WFA F
Sbjct: 222 CGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVVPTIVRRGASWFAGF 281
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
GR+ N GTKLFC+SGHVN PCT+EEEMSIPL+ELIDRHCGGVRGGWDNLLAVIPGGSS P
Sbjct: 282 GRERNQGTKLFCISGHVNNPCTIEEEMSIPLRELIDRHCGGVRGGWDNLLAVIPGGSSTP 341
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
+LPK ICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCTPC
Sbjct: 342 ILPKKICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCTPC 401
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
REG+ W IM R++ G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPE
Sbjct: 402 REGSKWTQQIMHRMEHGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPE 461
Query: 469 LERRIKEHAE 478
LE RIK++ E
Sbjct: 462 LEARIKKYEE 471
>gi|296808193|ref|XP_002844435.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Arthroderma otae CBS
113480]
gi|238843918|gb|EEQ33580.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Arthroderma otae CBS
113480]
Length = 534
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/455 (72%), Positives = 379/455 (83%), Gaps = 15/455 (3%)
Query: 28 RSFST-QGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWH 86
R F+T Q A+TA P+ +GGLKD+DRIF NLYG H P LK AMK GDW+
Sbjct: 64 RGFATVQDAATAHPPRV-----------YGGLKDQDRIFQNLYGRHPPDLKHAMKSGDWY 112
Query: 87 RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADES 143
+TK+++LKG DWI++EVK SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE
Sbjct: 113 KTKEIILKGHDWIISEVKTSGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEG 172
Query: 144 EPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAG 203
EPGTCKDREIMR DPHKL+EGCLI+G M A+AAYIYIRGE+ E L++A EAYAAG
Sbjct: 173 EPGTCKDREIMRKDPHKLIEGCLISGRAMNATAAYIYIRGEFYEEATVLQQAINEAYAAG 232
Query: 204 LLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPT 263
L+GKNACGSGYDFDV+IH G GAYICGEETAL+ES+EGK GKPRLKPPFPA GL+GCP+
Sbjct: 233 LIGKNACGSGYDFDVYIHRGMGAYICGEETALIESIEGKAGKPRLKPPFPAAVGLFGCPS 292
Query: 264 TVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI 323
TVTNVETVAV+PTI RRG WFA FGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI
Sbjct: 293 TVTNVETVAVAPTICRRGGKWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELI 352
Query: 324 DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS 383
DRHCGGVRGGWDNLLAVIPGGSS P+LPKHICDD +MD+DALK QSGLGTAAVIVMDKS
Sbjct: 353 DRHCGGVRGGWDNLLAVIPGGSSTPVLPKHICDDQMMDFDALKDSQSGLGTAAVIVMDKS 412
Query: 384 TDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE 443
TD+V AI+RLS FY+HESCGQCTPCREG+ W +MER + G A+ EIDMLQE+TKQ+E
Sbjct: 413 TDIVRAISRLSAFYRHESCGQCTPCREGSKWTLQMMERFERGQAREREIDMLQELTKQVE 472
Query: 444 GHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
GHTICALG+A AWP+QGLIRHFRPELE RI+++ +
Sbjct: 473 GHTICALGEAFAWPIQGLIRHFRPELEARIRQNTQ 507
>gi|348527076|ref|XP_003451045.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Oreochromis niloticus]
Length = 472
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/444 (74%), Positives = 375/444 (84%), Gaps = 4/444 (0%)
Query: 36 STASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKG 95
STA+ PQ P +KT FG L D+DRIFTNLYG HD LKGA+KRGDW++TK+++LKG
Sbjct: 22 STAAQPQQVKP----KKTKFGPLSDQDRIFTNLYGRHDWRLKGALKRGDWYKTKEIILKG 77
Query: 96 ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMR 155
DWI+NEVK SGLRGRGGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDREIMR
Sbjct: 78 QDWILNEVKISGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMR 137
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
HDPHKL+EGCL+AG GM A AAYIYIRGE+ NE NL+ A EAY AGL+GKNACGSGYD
Sbjct: 138 HDPHKLIEGCLVAGRGMGARAAYIYIRGEFYNESSNLQVAINEAYKAGLIGKNACGSGYD 197
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV + GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+P
Sbjct: 198 FDVFVMRGAGAYICGEETALIESLEGKQGKPRLKPPFPADIGVFGCPTTVANVETVAVAP 257
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PL+ELI+RH GGVRGGWD
Sbjct: 258 TICRRGGAWFASFGRERNSGTKLFNISGHVNTPCTVEEEMSVPLRELIERHAGGVRGGWD 317
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLL VIPGGSS P++P+H+CDDVLMD+D L +S LGTAAVIVMDKSTDVV AIARL
Sbjct: 318 NLLGVIPGGSSTPIIPRHVCDDVLMDFDDLVRAESALGTAAVIVMDKSTDVVRAIARLVE 377
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG W+ +M R G A + EIDM+ E++KQIEGHTICALGD AA
Sbjct: 378 FYKHESCGQCTPCREGVDWMDKMMWRFVRGEAAVSEIDMIWELSKQIEGHTICALGDGAA 437
Query: 456 WPVQGLIRHFRPELERRIKEHAER 479
WPVQGLIRHFRP +E RI ++ ++
Sbjct: 438 WPVQGLIRHFRPVMENRIAQYNKK 461
>gi|94468934|gb|ABF18316.1| mitochondrial NADH:ubiquinone oxidoreductase NDUFV1/51 kDa subunit
[Aedes aegypti]
Length = 486
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/433 (75%), Positives = 373/433 (86%)
Query: 47 PPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKS 106
PPP KT FG L D+DRIFTNLYG HD LKGA+KRGDW++TK+++LKG DWI+NE+K S
Sbjct: 49 PPPQTKTKFGPLADQDRIFTNLYGRHDWRLKGALKRGDWYKTKEILLKGTDWIINEIKVS 108
Query: 107 GLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GLRGRGGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL
Sbjct: 109 GLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCL 168
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
IAG M A AAYIYIRGE+ NE N++ A EAY AGL+GKNAC SGYDFDV +H GAGA
Sbjct: 169 IAGRAMGARAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACNSGYDFDVFMHRGAGA 228
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV+NVETVAV+PTI RRG WFA
Sbjct: 229 YICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVSNVETVAVAPTICRRGGVWFA 288
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGVRGGWDNLL +IPGGSS
Sbjct: 289 SFGRTRNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGVRGGWDNLLGIIPGGSS 348
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P++PK++CDDVLMD+D L Q+ LGTAA+IVMDKSTDV+ AI+RL FYKHESCGQCT
Sbjct: 349 TPIIPKNVCDDVLMDFDGLVQAQTSLGTAAIIVMDKSTDVIKAISRLIDFYKHESCGQCT 408
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG W++ +M R GN + EEIDML E++KQIEGHTICALGD AAWPVQGLIRHFR
Sbjct: 409 PCREGITWMYKMMHRFVDGNGRPEEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFR 468
Query: 467 PELERRIKEHAER 479
PE+E R+K++ ++
Sbjct: 469 PEIEARMKKYEQK 481
>gi|283046718|ref|NP_001164305.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Tribolium castaneum]
gi|270008216|gb|EFA04664.1| hypothetical protein TcasGA2_TC014119 [Tribolium castaneum]
Length = 478
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/426 (76%), Positives = 366/426 (85%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA+KRGDW++TK+++LKG+DWI+NE+K SGLRGRGGA
Sbjct: 47 FGPLSDEDRIFTNLYGKHDWRLKGALKRGDWYKTKEILLKGSDWIINEIKTSGLRGRGGA 106
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 107 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 166
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AGLLGKNACGSGYDFDV +H GAGAYICGEETA
Sbjct: 167 KAAYIYIRGEFYNEASNMQVAIAEAYQAGLLGKNACGSGYDFDVFMHRGAGAYICGEETA 226
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAVSPTI RRG WFASFGR NS
Sbjct: 227 LIESIEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVSPTICRRGGTWFASFGRTRNS 286
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN+PCTVEEEMSI KEL++RH GG+ GGWDNLLA+IPGGSS PL+PK +
Sbjct: 287 GTKLFNISGHVNRPCTVEEEMSITFKELVERHAGGIIGGWDNLLAIIPGGSSTPLIPKSV 346
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C+DV+MD+D L A Q+ LGTAA+IVM+K TD+V AIARL FYKHESCGQCTPCREG W
Sbjct: 347 CEDVIMDFDGLVAAQTSLGTAAIIVMNKQTDIVKAIARLIMFYKHESCGQCTPCREGINW 406
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R GNAK EEIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++
Sbjct: 407 MNKIMYRFVDGNAKPEEIDMLWELSKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMR 466
Query: 475 EHAERE 480
+ E+
Sbjct: 467 KFHEQN 472
>gi|157116636|ref|XP_001658587.1| NADH-ubiquinone oxidoreductase flavoprotein 1 (ndufv1) [Aedes
aegypti]
gi|108876370|gb|EAT40595.1| AAEL007681-PA [Aedes aegypti]
Length = 487
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/433 (75%), Positives = 373/433 (86%)
Query: 47 PPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKS 106
PPP KT FG L D+DRIFTNLYG HD LKGA+KRGDW++TK+++LKG DWI+NE+K S
Sbjct: 49 PPPQTKTKFGPLADQDRIFTNLYGRHDWRLKGALKRGDWYKTKEILLKGTDWIINEIKVS 108
Query: 107 GLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GLRGRGGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL
Sbjct: 109 GLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCL 168
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
IAG M A AAYIYIRGE+ NE N++ A EAY AGL+GKNAC SGYDFDV +H GAGA
Sbjct: 169 IAGRAMGARAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACNSGYDFDVFMHRGAGA 228
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV+NVETVAV+PTI RRG WFA
Sbjct: 229 YICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVSNVETVAVAPTICRRGGVWFA 288
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGVRGGWDNLL +IPGGSS
Sbjct: 289 SFGRTRNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGVRGGWDNLLGIIPGGSS 348
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P++PK++CDDVLMD+D L Q+ LGTAA+IVMDKSTDV+ AI+RL FYKHESCGQCT
Sbjct: 349 TPIIPKNVCDDVLMDFDGLVQAQTSLGTAAIIVMDKSTDVIKAISRLIDFYKHESCGQCT 408
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG W++ +M R GN + EEIDML E++KQIEGHTICALGD AAWPVQGLIRHFR
Sbjct: 409 PCREGITWMYKMMHRFVDGNGRPEEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFR 468
Query: 467 PELERRIKEHAER 479
PE+E R+K++ ++
Sbjct: 469 PEIEARMKKYEQK 481
>gi|302658280|ref|XP_003020846.1| hypothetical protein TRV_05072 [Trichophyton verrucosum HKI 0517]
gi|291184712|gb|EFE40228.1| hypothetical protein TRV_05072 [Trichophyton verrucosum HKI 0517]
Length = 595
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/427 (75%), Positives = 369/427 (86%), Gaps = 3/427 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG H P LK AMK GDW++TK+++LKG DWI++E+K SGLRGRGGA
Sbjct: 142 YGGLKDQDRIFQNLYGRHPPDLKHAMKCGDWYKTKEIILKGHDWIISEIKTSGLRGRGGA 201
Query: 115 GFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL++G
Sbjct: 202 GFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVSGRA 261
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ E L++A EAYAAGL+GKNACGSGYDFDV+IH G GAYICGE
Sbjct: 262 MNATAAYIYIRGEFYEEATVLQKAINEAYAAGLIGKNACGSGYDFDVYIHRGMGAYICGE 321
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+PTI RRG WFA FGR+
Sbjct: 322 ETALIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAPTICRRGGKWFAGFGRE 381
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWDNLLAVIPGGSS P+LP
Sbjct: 382 RNQGTKLFCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWDNLLAVIPGGSSTPVLP 441
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
KHICDD +MD+DALK QSGLGTAAVIVMDKSTD+V AI+RLS FY+HESCGQCTPCREG
Sbjct: 442 KHICDDQMMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSAFYRHESCGQCTPCREG 501
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
+ W +MER + G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE
Sbjct: 502 SKWTLQMMERFERGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEG 561
Query: 472 RIKEHAE 478
RI+++A+
Sbjct: 562 RIRQNAQ 568
>gi|358366344|dbj|GAA82965.1| mitochondrial proton-pumping NADH:ubiquinone reductase Nuo51
[Aspergillus kawachii IFO 4308]
Length = 496
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/447 (73%), Positives = 377/447 (84%), Gaps = 7/447 (1%)
Query: 35 ASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLK 94
A + +T Q PP H+GGLKD+DRIFTNLYG H LK AMK GDWHRTKD+VLK
Sbjct: 27 ARSFATVQDNAPPV----KHYGGLKDQDRIFTNLYGHHGADLKSAMKYGDWHRTKDIVLK 82
Query: 95 GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDR 151
G DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNADE EPGTCKDR
Sbjct: 83 GHDWLISELKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDR 142
Query: 152 EIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACG 211
EIMR DP KL+EGCL+ G M A+AAYIYIRGE+ E L+RA EAY AGL+GKNACG
Sbjct: 143 EIMRKDPQKLIEGCLVVGRAMNANAAYIYIRGEFYQEATVLQRAINEAYEAGLIGKNACG 202
Query: 212 SGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETV 271
+GYDFDV+IH G GAY+CGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETV
Sbjct: 203 TGYDFDVYIHRGMGAYVCGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETV 262
Query: 272 AVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVR 331
AV+PTI+RRG WF+SFGR+ N+GTKL+C+SGHVN PCTVEEEMSI L+ELIDRHCGGVR
Sbjct: 263 AVTPTIMRRGASWFSSFGRERNAGTKLYCISGHVNNPCTVEEEMSISLRELIDRHCGGVR 322
Query: 332 GGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIA 391
GGWDNLLAVIPGGSS P+LPKHICDD LMD+DALK QSGLGTAAVIVMDKSTD+V AI+
Sbjct: 323 GGWDNLLAVIPGGSSTPVLPKHICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRAIS 382
Query: 392 RLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALG 451
RLS FYKHESCGQCTPCREG+ W +M+R++ G A+ EIDMLQE+TKQ+EGHTICALG
Sbjct: 383 RLSTFYKHESCGQCTPCREGSKWTMQMMQRMEKGQAREREIDMLQELTKQVEGHTICALG 442
Query: 452 DAAAWPVQGLIRHFRPELERRIKEHAE 478
+A AWP+QGLIRHFRPELE RI+E+++
Sbjct: 443 EAFAWPIQGLIRHFRPELEARIREYSK 469
>gi|315042968|ref|XP_003170860.1| NADH-ubiquinone oxidoreductase subunit [Arthroderma gypseum CBS
118893]
gi|311344649|gb|EFR03852.1| NADH-ubiquinone oxidoreductase subunit [Arthroderma gypseum CBS
118893]
Length = 535
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/455 (72%), Positives = 378/455 (83%), Gaps = 15/455 (3%)
Query: 28 RSFST-QGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWH 86
R F+T Q +TA P+ +GGLKD+DRIF NLYG H P LK AMK GDW+
Sbjct: 65 RGFATVQDGATAHPPRV-----------YGGLKDQDRIFQNLYGRHPPDLKHAMKCGDWY 113
Query: 87 RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADES 143
+TK+++LKG DWI+NEVK SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE
Sbjct: 114 KTKEIILKGHDWIINEVKTSGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEG 173
Query: 144 EPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAG 203
EPGTCKDREIMR DPHKL+EGCLI+G M A+AAYIYIRGE+ E L++A EAYAAG
Sbjct: 174 EPGTCKDREIMRKDPHKLIEGCLISGRAMNATAAYIYIRGEFYEEATVLQKAINEAYAAG 233
Query: 204 LLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPT 263
L+GKNACGSGYDFDV+IH G GAYICGEETAL+ES+EGK GKPRLKPPFPA GL+GCP+
Sbjct: 234 LIGKNACGSGYDFDVYIHRGMGAYICGEETALIESIEGKAGKPRLKPPFPAAVGLFGCPS 293
Query: 264 TVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI 323
TVTNVETVAV+P I RRG WFA FGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI
Sbjct: 294 TVTNVETVAVAPAICRRGGKWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELI 353
Query: 324 DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS 383
DRHCGGVRGGWDNLLAVIPGGSS P+LPKH+CDD +MD+DALK QSGLGTAAVIVMDKS
Sbjct: 354 DRHCGGVRGGWDNLLAVIPGGSSTPVLPKHVCDDQMMDFDALKDSQSGLGTAAVIVMDKS 413
Query: 384 TDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE 443
TD+V AI+RLS FY+HESCGQCTPCREG+ W +MER + G A+ EIDMLQE+TKQ+E
Sbjct: 414 TDIVRAISRLSAFYRHESCGQCTPCREGSKWTLQMMERFERGQAREREIDMLQELTKQVE 473
Query: 444 GHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
GHTICALG+A AWP+QGLIRHFRPELE RI+++A+
Sbjct: 474 GHTICALGEAFAWPIQGLIRHFRPELEARIRQNAQ 508
>gi|58332830|ref|NP_001011491.1| NADH dehydrogenase ubiquinone flavoprotein 1 [Xenopus (Silurana)
tropicalis]
gi|57033091|gb|AAH88876.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [Xenopus
(Silurana) tropicalis]
gi|89269885|emb|CAJ83800.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Xenopus (Silurana)
tropicalis]
Length = 468
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/429 (75%), Positives = 372/429 (86%)
Query: 46 PPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKK 105
P P+K+ FG L DEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K
Sbjct: 28 PEQTPKKSKFGPLSDEDRIFTNLYGRHDWGLKGALSRGDWYKTKEILLKGVDWILGEIKA 87
Query: 106 SGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGC
Sbjct: 88 SGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGC 147
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
L+AG M A AAYIYIRGE+ NE NL+ A +EAY+AGL+G+NACGSGYDFDV + GAG
Sbjct: 148 LVAGRSMGARAAYIYIRGEFYNEASNLQVAVREAYSAGLIGRNACGSGYDFDVFVVRGAG 207
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WF
Sbjct: 208 AYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGSWF 267
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
ASFGR+ N+GTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGV GGWDNLLAVIPGGS
Sbjct: 268 ASFGRERNAGTKLFNISGHVNNPCTVEEEMSIPLKELIERHAGGVTGGWDNLLAVIPGGS 327
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S PL+P+ +C+ VLMD+DAL Q+GLGTAA+IVM+KSTD+V AIARL FYKHESCGQC
Sbjct: 328 STPLIPQSVCETVLMDFDALVQAQTGLGTAAIIVMNKSTDIVRAIARLIEFYKHESCGQC 387
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREG W+ +M R+ G+A+++EIDML E++KQIEGHTICALGD AAWPVQGLIRHF
Sbjct: 388 TPCREGVDWMNKVMWRMCQGDARVDEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHF 447
Query: 466 RPELERRIK 474
RPELE+R+K
Sbjct: 448 RPELEKRMK 456
>gi|119500302|ref|XP_001266908.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Neosartorya
fischeri NRRL 181]
gi|119415073|gb|EAW25011.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Neosartorya
fischeri NRRL 181]
Length = 496
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/457 (72%), Positives = 379/457 (82%), Gaps = 6/457 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RS QG++ S P H GGL+D+DRIFTNLYG H LK AMK GDWHR
Sbjct: 19 RSLRVQGSAARSFASVQDTTHPVR--HHGGLRDQDRIFTNLYGHHGADLKSAMKFGDWHR 76
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESE 144
TKD+VLKG DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNADE E
Sbjct: 77 TKDIVLKGHDWLISEIKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGE 136
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREIMR DPHKL+EGCL+ G M A+AAYIYIRGE+ +E L+RA EAY AGL
Sbjct: 137 PGTCKDREIMRKDPHKLIEGCLVVGRAMNANAAYIYIRGEFYHEATVLQRAINEAYQAGL 196
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
+GKNACG+GYDFDV+IH G GAYICGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+T
Sbjct: 197 IGKNACGTGYDFDVYIHRGMGAYICGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPST 256
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
VTNVETVAV PTI+RRG WF+SFG + NSGTKLFC+SGHVN PCTVEEEMSIPL+ELID
Sbjct: 257 VTNVETVAVCPTIMRRGASWFSSFGAERNSGTKLFCISGHVNNPCTVEEEMSIPLRELID 316
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
RHCGGVRGGWDNLLAVIPGGSS P++PK ICD+ +MD+D+LK Q+GLGTAAVIVMDKST
Sbjct: 317 RHCGGVRGGWDNLLAVIPGGSSTPVIPKSICDNQIMDFDSLKDSQTGLGTAAVIVMDKST 376
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+V AI+RLS FYKHESCGQCTPCREG+ W +MER++ G A+ EIDMLQE+TKQ+EG
Sbjct: 377 DIVRAISRLSKFYKHESCGQCTPCREGSKWTAQMMERMEKGQAREREIDMLQELTKQVEG 436
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAEREL 481
HTICALG+A AWP+QGLIRHFRPELE RIKE+ EREL
Sbjct: 437 HTICALGEAFAWPIQGLIRHFRPELEARIKEY-EREL 472
>gi|169771479|ref|XP_001820209.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus oryzae RIB40]
gi|238485950|ref|XP_002374213.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Aspergillus
flavus NRRL3357]
gi|83768068|dbj|BAE58207.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699092|gb|EED55431.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Aspergillus
flavus NRRL3357]
gi|391871667|gb|EIT80824.1| NADH ubiquinone oxidoreductase, NDUFV1/51kDa subunit [Aspergillus
oryzae 3.042]
Length = 496
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/449 (72%), Positives = 377/449 (83%), Gaps = 7/449 (1%)
Query: 33 QGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLV 92
Q A T +T Q PP H GGL+D+DRIFTNLYG H LK AMK GDWHRTKD+V
Sbjct: 26 QAARTFATVQDNAPP----VRHHGGLQDQDRIFTNLYGHHGADLKSAMKYGDWHRTKDIV 81
Query: 93 LKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCK 149
LKG DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNADE EPGTCK
Sbjct: 82 LKGDDWLISELKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGEPGTCK 141
Query: 150 DREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNA 209
DREIMR DP KL+EGCL+ G M A+AAYIYIRGE+ +E L+RA EAY AGL+GKNA
Sbjct: 142 DREIMRKDPQKLIEGCLVVGRAMNANAAYIYIRGEFYHEATVLQRAINEAYEAGLIGKNA 201
Query: 210 CGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVE 269
CG+GYDFDV+IH G GAY+CGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVE
Sbjct: 202 CGTGYDFDVYIHRGMGAYVCGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVE 261
Query: 270 TVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGG 329
TVAV+PTI+RRG WF+SFGR+ N+GTKL+C+SGHVN P TVEEEMSIPL+ELIDRHCGG
Sbjct: 262 TVAVTPTIMRRGASWFSSFGRERNAGTKLYCISGHVNNPVTVEEEMSIPLRELIDRHCGG 321
Query: 330 VRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDA 389
VRGGWDNLLAVIPGGSS P++PK +CDD LMD+DALK QSGLGTAAVIVMDKSTD+V A
Sbjct: 322 VRGGWDNLLAVIPGGSSTPVIPKSVCDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRA 381
Query: 390 IARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICA 449
I+RLS FY+HESCGQCTPCREG+ W IM+R++ G A+ EIDMLQE+TKQ+EGHTICA
Sbjct: 382 ISRLSSFYRHESCGQCTPCREGSKWTQQIMQRMETGQAREREIDMLQELTKQVEGHTICA 441
Query: 450 LGDAAAWPVQGLIRHFRPELERRIKEHAE 478
LG+A AWP+QGLIRHFRPELE +I+EHA+
Sbjct: 442 LGEAFAWPIQGLIRHFRPELEAKIREHAQ 470
>gi|302498901|ref|XP_003011447.1| hypothetical protein ARB_02297 [Arthroderma benhamiae CBS 112371]
gi|291174998|gb|EFE30807.1| hypothetical protein ARB_02297 [Arthroderma benhamiae CBS 112371]
Length = 535
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/427 (75%), Positives = 369/427 (86%), Gaps = 3/427 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG H P LK AMK GDW++TK+++LKG DWI++E+K SGLRGRGGA
Sbjct: 82 YGGLKDQDRIFQNLYGRHPPDLKHAMKCGDWYKTKEIILKGHDWIISEIKTSGLRGRGGA 141
Query: 115 GFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL++G
Sbjct: 142 GFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVSGRA 201
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ E L++A EAYAAGL+GKNACGSGYDFDV+IH G GAYICGE
Sbjct: 202 MNATAAYIYIRGEFYEEATVLQKAINEAYAAGLIGKNACGSGYDFDVYIHRGMGAYICGE 261
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+PTI RRG WFA FGR+
Sbjct: 262 ETALIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAPTICRRGGKWFAGFGRE 321
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWDNLLAVIPGGSS P+LP
Sbjct: 322 RNQGTKLFCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWDNLLAVIPGGSSTPVLP 381
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
KHICDD +MD+DALK QSGLGTAAVIVMDKSTD+V AI+RLS FY+HESCGQCTPCREG
Sbjct: 382 KHICDDQMMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSAFYRHESCGQCTPCREG 441
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
+ W +MER + G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE
Sbjct: 442 SKWTLQMMERFERGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEA 501
Query: 472 RIKEHAE 478
RI+++A+
Sbjct: 502 RIRQNAQ 508
>gi|212542183|ref|XP_002151246.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Talaromyces
marneffei ATCC 18224]
gi|210066153|gb|EEA20246.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Talaromyces
marneffei ATCC 18224]
Length = 505
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/430 (75%), Positives = 369/430 (85%), Gaps = 4/430 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P++T +GGLKD+DRIFTNLYG H LK AMK GDW++TKD++LKG DW+++E+K SGLR
Sbjct: 49 PKRT-YGGLKDQDRIFTNLYGHHGTDLKSAMKYGDWYKTKDMILKGHDWLISEIKASGLR 107
Query: 110 GRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLK+SFM D RP YLVVNADE EPGTCKDREIMR DP KL+EGCL
Sbjct: 108 GRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDREIMRKDPQKLIEGCL 167
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+ G M A+AAYIYIRGE+ E L+RA EAY AGL+GKNACGSGYDFDV+IH GAGA
Sbjct: 168 VVGRAMNATAAYIYIRGEFYEEATTLQRAIHEAYQAGLIGKNACGSGYDFDVYIHRGAGA 227
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV PTI+RRG WFA
Sbjct: 228 YVCGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVVPTIMRRGGSWFA 287
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWDNLLAVIPGGSS
Sbjct: 288 GFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWDNLLAVIPGGSS 347
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P+LPK ICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCT
Sbjct: 348 TPILPKSICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCT 407
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ W IM R++ G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFR
Sbjct: 408 PCREGSKWTQQIMHRMEHGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFR 467
Query: 467 PELERRIKEH 476
PELE RIK++
Sbjct: 468 PELEARIKQY 477
>gi|387019619|gb|AFJ51927.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, mitochondrial-like
[Crotalus adamanteus]
Length = 466
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/435 (74%), Positives = 373/435 (85%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+NE+K SGLRG
Sbjct: 31 KKTQFGPLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGIDWILNEIKVSGLRG 90
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFP+GLKWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG
Sbjct: 91 RGGAGFPTGLKWSFMNKPPDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLVAGR 150
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICG
Sbjct: 151 SMGARAAYIYIRGEFYNEASNLQVAIKEAYEAGLVGKNACGSGYDFDVFVTRGAGAYICG 210
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WFA FGR
Sbjct: 211 EETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGTWFAGFGR 270
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTKLF +SGHVN PCTVEEEMS+PL++LI+RH GG+RGGWDNLLAVIPGGSS PL+
Sbjct: 271 ERNSGTKLFNISGHVNTPCTVEEEMSVPLRDLIERHAGGIRGGWDNLLAVIPGGSSTPLI 330
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +C+ VLMD+DAL Q+GLGTAA+IVMDKSTD+V AIARL FYKHESCGQCTPCRE
Sbjct: 331 PKSVCETVLMDFDALVEAQTGLGTAALIVMDKSTDIVRAIARLIEFYKHESCGQCTPCRE 390
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G W+ +M R GNA++ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE
Sbjct: 391 GVDWMNKVMWRFVRGNAQVAEIDALWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE 450
Query: 471 RRIKEHAERELLEAT 485
R+K++ E + +A+
Sbjct: 451 ERMKQYNESKNQQAS 465
>gi|148222918|ref|NP_001080215.1| NADH dehydrogenase ubiquinone flavoprotein 1 [Xenopus laevis]
gi|27370996|gb|AAH41320.1| Ndufv1 protein [Xenopus laevis]
gi|77748340|gb|AAI06321.1| Ndufv1 protein [Xenopus laevis]
Length = 471
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/442 (74%), Positives = 376/442 (85%), Gaps = 2/442 (0%)
Query: 46 PPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKK 105
P P+KT FG L DEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI EVK
Sbjct: 29 PDQTPKKTKFGPLSDEDRIFTNLYGRHDWGLKGALSRGDWYKTKEILLKGVDWIQGEVKT 88
Query: 106 SGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGC
Sbjct: 89 SGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGC 148
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
L+AG M A AAYIYIRGE+ NE NL+ A +EAY+AGL+G+NACGSGYDFDV + GAG
Sbjct: 149 LVAGRSMGARAAYIYIRGEFYNEASNLQVAVREAYSAGLIGRNACGSGYDFDVFVVRGAG 208
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WF
Sbjct: 209 AYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGSWF 268
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
ASFGR+ NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGV GGWDNLLAVIPGGS
Sbjct: 269 ASFGRERNSGTKLFNISGHVNNPCTVEEEMSIPLKELIERHAGGVTGGWDNLLAVIPGGS 328
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S PL+P+ +C+ VLMD+DAL Q+GLGTAA+IVM+KSTD+V AIARL FYKHESCGQC
Sbjct: 329 STPLIPRSVCETVLMDFDALVQAQTGLGTAAIIVMNKSTDIVRAIARLIEFYKHESCGQC 388
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREG W+ +M R+ G+A ++EIDML E++KQIEGHTICALGD AAWPVQGLIRHF
Sbjct: 389 TPCREGVDWMNKVMWRMCRGDAHVDEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHF 448
Query: 466 RPELERRIK--EHAERELLEAT 485
RPELE+R+K + A+R+ T
Sbjct: 449 RPELEQRMKLFDTAKRQQASKT 470
>gi|145258049|ref|XP_001401928.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus niger CBS
513.88]
gi|134074533|emb|CAK38826.1| mitochondrial proton-pumping NADH:ubiquinone reductase
nuo51-Aspergillus niger
gi|350632382|gb|EHA20750.1| 51kDa subunit of NADH:ubiquinone reductase [Aspergillus niger ATCC
1015]
Length = 496
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/447 (73%), Positives = 376/447 (84%), Gaps = 7/447 (1%)
Query: 35 ASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLK 94
A + +T Q PP H+GGLKD+DRIFTNLYG H LK AMK GDWHRTKD+VLK
Sbjct: 27 ARSFATVQDNAPPV----KHYGGLKDQDRIFTNLYGHHGADLKSAMKYGDWHRTKDIVLK 82
Query: 95 GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDR 151
G DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNADE EPGTCKDR
Sbjct: 83 GHDWLISELKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDR 142
Query: 152 EIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACG 211
EIMR DP KL+EGCL+ G M A+AAYIYIRGE+ E L+RA EAY AGL+GKNACG
Sbjct: 143 EIMRKDPQKLIEGCLVVGRAMNANAAYIYIRGEFYQEATVLQRAINEAYEAGLIGKNACG 202
Query: 212 SGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETV 271
+GYDFDV+IH G GAY+CGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETV
Sbjct: 203 TGYDFDVYIHRGMGAYVCGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETV 262
Query: 272 AVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVR 331
AV+PTI+RRG WF+SFGR+ N+GTKLFC+SGHVN PCTVEEEMSI L+ELIDRHCGGVR
Sbjct: 263 AVTPTIMRRGASWFSSFGRERNAGTKLFCISGHVNNPCTVEEEMSISLRELIDRHCGGVR 322
Query: 332 GGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIA 391
GGWDNLLAVIPGGSS P+LPK ICDD LMD+DALK QSGLGTAAVIVMDKSTD+V AI+
Sbjct: 323 GGWDNLLAVIPGGSSTPVLPKTICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRAIS 382
Query: 392 RLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALG 451
RLS FYKHESCGQCTPCREG+ W +M+R++ G A+ EIDMLQE+TKQ+EGHTICALG
Sbjct: 383 RLSTFYKHESCGQCTPCREGSKWTMQMMQRMEKGQAREREIDMLQELTKQVEGHTICALG 442
Query: 452 DAAAWPVQGLIRHFRPELERRIKEHAE 478
+A AWP+QGLIRHFRPELE RI+E+++
Sbjct: 443 EAFAWPIQGLIRHFRPELEARIREYSK 469
>gi|345783021|ref|XP_851761.2| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 2 [Canis lupus familiaris]
Length = 464
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/430 (75%), Positives = 367/430 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIKEHAER 479
E R++ A++
Sbjct: 447 EERMQRFAQQ 456
>gi|345568051|gb|EGX50952.1| hypothetical protein AOL_s00054g688 [Arthrobotrys oligospora ATCC
24927]
Length = 514
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/431 (74%), Positives = 371/431 (86%), Gaps = 3/431 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
++T FGGLKD+DRIF NLYG H LK A K GDW++TK+++LKG DWI+NE+K SGLRG
Sbjct: 58 KRTQFGGLKDQDRIFQNLYGHHGADLKSAQKYGDWYKTKEIILKGHDWIINEIKASGLRG 117
Query: 111 RGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLI 167
RGGAGFPSG+KWSFM D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+
Sbjct: 118 RGGAGFPSGMKWSFMNFPGWDKDTRPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLV 177
Query: 168 AGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAY 227
AG M A+AAYIYIRGE+ +E ++RA QEAYAAGL+GKNACGSGYDFDV++H G GAY
Sbjct: 178 AGRAMNATAAYIYIRGEFYHEATCVQRAIQEAYAAGLIGKNACGSGYDFDVYVHRGMGAY 237
Query: 228 ICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFAS 287
ICGEET+L+ESLEGK GKPRLKPPFPA+ GL+GCP+TV NVETVAV+PTI RRG WF S
Sbjct: 238 ICGEETSLIESLEGKPGKPRLKPPFPASVGLFGCPSTVANVETVAVAPTICRRGGKWFDS 297
Query: 288 FGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSV 347
FGR NSGTKLFC+SG+VN PCTVEEEMSIPLKELI++HCGGVRGGWDNLLAVIPGGSS
Sbjct: 298 FGRDRNSGTKLFCISGNVNNPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSST 357
Query: 348 PLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTP 407
P+LPKHICDDVLMD+DALK QSGLGTAAVIV+DKS DVV +IARLS FY+HESCGQCTP
Sbjct: 358 PILPKHICDDVLMDFDALKDAQSGLGTAAVIVLDKSADVVRSIARLSVFYRHESCGQCTP 417
Query: 408 CREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRP 467
CREG+ W IMER + G + EIDMLQE+TKQ+EGH+ICALG+A AWP+QGLIRHFRP
Sbjct: 418 CREGSKWTQQIMERFERGQGSVREIDMLQELTKQVEGHSICALGEAFAWPIQGLIRHFRP 477
Query: 468 ELERRIKEHAE 478
ELE R++++AE
Sbjct: 478 ELEARMQKYAE 488
>gi|378731231|gb|EHY57690.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
[Exophiala dermatitidis NIH/UT8656]
Length = 504
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/440 (73%), Positives = 372/440 (84%), Gaps = 3/440 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+K +GGLKD+DRIF NLYG H LK AMK GDW++TK++VLKG DW++NE+K SGLR
Sbjct: 47 PQKRRYGGLKDQDRIFQNLYGHHGTDLKSAMKYGDWYKTKEIVLKGHDWLINEIKASGLR 106
Query: 110 GRGGAGFPSGLKWSFMPKV---SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLK+SFM +D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 107 GRGGAGFPSGLKFSFMNFKGWENDKRPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCL 166
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+ G M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACGSGYDFDV++H G GA
Sbjct: 167 VVGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYKAGLIGKNACGSGYDFDVYLHRGMGA 226
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV PTI RRG WFA
Sbjct: 227 YVCGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVCPTIARRGGKWFA 286
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI++HCGGVRGGWDNL AVIPGGSS
Sbjct: 287 SFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIEKHCGGVRGGWDNLQAVIPGGSS 346
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P+LPKHICDD LMD+DALK QSGLGTAAVIVMDKS DVV I+RLS FYKHESCGQCT
Sbjct: 347 TPILPKHICDDQLMDFDALKDSQSGLGTAAVIVMDKSADVVRMISRLSQFYKHESCGQCT 406
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ W +M+R + G A+ EIDM+QE+TKQ+EGH+ICALG+A AWP+QGLIRHFR
Sbjct: 407 PCREGSAWTARMMQRFEKGQARSREIDMIQELTKQVEGHSICALGEAFAWPIQGLIRHFR 466
Query: 467 PELERRIKEHAERELLEATA 486
P+LE RIKE+A+ EA A
Sbjct: 467 PQLEARIKEYAKTAGGEALA 486
>gi|295669264|ref|XP_002795180.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Paracoccidioides sp.
'lutzii' Pb01]
gi|226285114|gb|EEH40680.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Paracoccidioides sp.
'lutzii' Pb01]
Length = 515
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/443 (73%), Positives = 374/443 (84%), Gaps = 5/443 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q PP +GGLKD+DRIF NLYG H LK AMK GDW++TK++VLKG DW
Sbjct: 48 ATVQDAAATTPPRS--YGGLKDQDRIFQNLYGHHGADLKTAMKYGDWYKTKEIVLKGHDW 105
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR
Sbjct: 106 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMR 165
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCLIAG M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACG+GYD
Sbjct: 166 KDPHKLVEGCLIAGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYGAGLIGKNACGTGYD 225
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV+IH G GAYICGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 226 FDVYIHRGMGAYICGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 285
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI+RHCGGVRGGWD
Sbjct: 286 TICRRGGKWFASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWD 345
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKH+CDD +MD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS
Sbjct: 346 NLLAVIPGGSSTPILPKHVCDDQMMDFDALKDAQSGLGTAAVIVMDKSTDVVAAISRLSA 405
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W +M+R + G A+ EIDM+QE+TKQ+EGHTICALG+A +
Sbjct: 406 FYKHESCGQCTPCREGSKWTAQMMQRFERGQAREREIDMIQELTKQVEGHTICALGEAFS 465
Query: 456 WPVQGLIRHFRPELERRIKEHAE 478
WP+QGLIRHFRPELE RI+++ +
Sbjct: 466 WPIQGLIRHFRPELEARIRKYEQ 488
>gi|70993752|ref|XP_751723.1| NADH-ubiquinone oxidoreductase, subunit F [Aspergillus fumigatus
Af293]
gi|66849357|gb|EAL89685.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Aspergillus
fumigatus Af293]
gi|159125355|gb|EDP50472.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Aspergillus
fumigatus A1163]
Length = 496
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/457 (72%), Positives = 379/457 (82%), Gaps = 6/457 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RS QG++ S P + GGL+D+DRIFTNLYG H LK AMK GDWHR
Sbjct: 19 RSLRIQGSAARSFASVQDTTHPVRQ--HGGLRDQDRIFTNLYGHHGTDLKSAMKFGDWHR 76
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESE 144
TKD+VLKG DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNADE E
Sbjct: 77 TKDIVLKGHDWLISEIKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGE 136
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREIMR DPHKL+EGCL+ G M A+AAYIYIRGE+ +E L+RA EAY AGL
Sbjct: 137 PGTCKDREIMRKDPHKLIEGCLVVGRAMNATAAYIYIRGEFYHEATVLQRAINEAYQAGL 196
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
+GKNACG+GYDFDV+IH G GAYICGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+T
Sbjct: 197 IGKNACGTGYDFDVYIHRGMGAYICGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPST 256
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
VTNVETVAV PTI+RRG WF+SFG + NSGTKLFC+SGHVN PCTVEEEMSIPL+ELID
Sbjct: 257 VTNVETVAVCPTIMRRGASWFSSFGAERNSGTKLFCISGHVNNPCTVEEEMSIPLRELID 316
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
RHCGGVRGGWDNLLAVIPGGSS P++PK +CD+ +MD+D+LK QSGLGTAAVIVMDKST
Sbjct: 317 RHCGGVRGGWDNLLAVIPGGSSTPVIPKSVCDNQIMDFDSLKDSQSGLGTAAVIVMDKST 376
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+V AI+RLS FYKHESCGQCTPCREG+ W +MER++ G A+ EIDMLQE+TKQ+EG
Sbjct: 377 DIVRAISRLSKFYKHESCGQCTPCREGSKWTAQMMERMEKGQAREREIDMLQELTKQVEG 436
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAEREL 481
HTICALG+A AWP+QGLIRHFRPELE RIKE+ EREL
Sbjct: 437 HTICALGEAFAWPIQGLIRHFRPELEARIKEY-EREL 472
>gi|296218952|ref|XP_002755638.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 1 [Callithrix jacchus]
Length = 464
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/437 (74%), Positives = 369/437 (84%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDAQPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIKEHAERELLEATA 486
E R++ A++ TA
Sbjct: 447 EERMQRFAQQHQARQTA 463
>gi|345783023|ref|XP_864381.2| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 7 [Canis lupus familiaris]
Length = 455
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/435 (74%), Positives = 368/435 (84%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK
Sbjct: 13 PARTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FASFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRIKEHAER 479
FRPELE R++ A++
Sbjct: 433 FRPELEERMQRFAQQ 447
>gi|193587168|ref|XP_001946240.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Acyrthosiphon pisum]
Length = 482
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/463 (69%), Positives = 375/463 (80%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
++GL S + + PPP K +G L D DRIFTNLYG HD LKGA+KRG
Sbjct: 19 AIGLPSLAFKNVLQTRQNTTAAAPPPELKASYGNLSDSDRIFTNLYGRHDWQLKGALKRG 78
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADES 143
DW++TK++++KG D+I+NEVK SGLRGRGGAGFP+G+KWSFM K SDGRP YLVVNADE
Sbjct: 79 DWYKTKEILIKGTDYIINEVKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEG 138
Query: 144 EPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAG 203
EPGTCKDREIMRHDPHKL+EGCL+AG M A AAYIYIRGE+ NE NL++A EAY AG
Sbjct: 139 EPGTCKDREIMRHDPHKLIEGCLVAGRAMGACAAYIYIRGEFYNEASNLQQAICEAYQAG 198
Query: 204 LLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPT 263
L+GKNAC SGYDFDV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPT
Sbjct: 199 LIGKNACNSGYDFDVFVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPT 258
Query: 264 TVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI 323
TV+NVETVAV+PTI RRG WF GR NSGTKLF +SGHVN PCTVEEEMSIPLKELI
Sbjct: 259 TVSNVETVAVAPTICRRGGAWFLGLGRPRNSGTKLFNISGHVNNPCTVEEEMSIPLKELI 318
Query: 324 DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS 383
+RH GG+ GGWDNLLAVIPGGSS PL+PKH+C+ +MD+D L A Q+ LGTAA+IVM+K
Sbjct: 319 ERHAGGIIGGWDNLLAVIPGGSSTPLIPKHVCETAIMDFDGLVAAQTSLGTAALIVMNKQ 378
Query: 384 TDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE 443
TD+V AIARL FYKHESCGQCTPCREG W+ IM R G A+ EIDML E++KQIE
Sbjct: 379 TDIVKAIARLIMFYKHESCGQCTPCREGINWMNKIMYRFVDGQAQSSEIDMLWEISKQIE 438
Query: 444 GHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
GHTICALGD AAWPVQGLIRHFRPELE R+K++ E+ +A +
Sbjct: 439 GHTICALGDGAAWPVQGLIRHFRPELECRMKKYQEQNEKQALS 481
>gi|407768985|ref|ZP_11116362.1| NADH dehydrogenase I subunit F [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407287905|gb|EKF13384.1| NADH dehydrogenase I subunit F [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 426
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/422 (76%), Positives = 366/422 (86%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D LK A RG+W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGFQDFGLKAAQARGNWDGTKALIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADE EPGTCKDREIMR+DPH L+EGCL+A M A A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADEGEPGTCKDREIMRNDPHTLIEGCLLASFAMNAHAG 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ +E NL+RA EAY AGLLGKNACGSG+D+D+++H GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEFYHEASNLQRAIDEAYEAGLLGKNACGSGWDYDLYLHLGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPANAGLYGCPTTV NVE++AV P ILRRG WF SFGR+NN GTK
Sbjct: 182 SLEGKKGQPRLKPPFPANAGLYGCPTTVNNVESIAVVPEILRRGGSWFTSFGRENNHGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHV KPCTVEE MSIPL+ELI++HCGGVRGGWDNLLAVIPGGSSVPL+ K ICDD
Sbjct: 242 LFAISGHVEKPCTVEEAMSIPLRELIEKHCGGVRGGWDNLLAVIPGGSSVPLMTKDICDD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL+ V SGLGTAAVIVMDKSTD+V AIARLS FY+HESCGQCTPCREGTGW+
Sbjct: 302 VLMDFDALREVGSGLGTAAVIVMDKSTDIVYAIARLSEFYQHESCGQCTPCREGTGWMAR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
IM R+ G A L+EID+L +VTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRIKE+
Sbjct: 362 IMARMVRGQATLDEIDLLWDVTKQVEGHTICALGDAAAWPIQGLIRRFRPEMERRIKEYR 421
Query: 478 ER 479
R
Sbjct: 422 AR 423
>gi|288856265|ref|NP_001165788.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Nasonia vitripennis]
Length = 472
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/452 (73%), Positives = 368/452 (81%), Gaps = 1/452 (0%)
Query: 23 LSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGG-LKDEDRIFTNLYGMHDPFLKGAMK 81
LSV R G + +S PE FG LKDEDRIFTNLYG HD LKGAMK
Sbjct: 9 LSVPRRQLGLLGQALSSQQSRNYADAAPEGKKFGSPLKDEDRIFTNLYGRHDWRLKGAMK 68
Query: 82 RGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNAD 141
RGDW++TK+++ KGADWI+NEVK SGLRGRGGAGFPSG+KWSFM K SDGRP YLV+N D
Sbjct: 69 RGDWYKTKEILDKGADWIINEVKVSGLRGRGGAGFPSGMKWSFMNKPSDGRPKYLVINGD 128
Query: 142 ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYA 201
E EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N + A EAY
Sbjct: 129 EGEPGTCKDREILRHDPHKLIEGCLIAGRAMGACAAYIYIRGEFYNEASNTQVAIAEAYQ 188
Query: 202 AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 261
AGLLGKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GC
Sbjct: 189 AGLLGKNACGSGYDFDVFVQRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGLFGC 248
Query: 262 PTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKE 321
PTTVTNVETVAV+P I RRG WFASFGR NSGTKL+ +SGHVN PCTVEEEMSIPLKE
Sbjct: 249 PTTVTNVETVAVAPAICRRGGSWFASFGRPRNSGTKLYNISGHVNNPCTVEEEMSIPLKE 308
Query: 322 LIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
LI+RH GGV GGWDNLL +IPGGSS P++PKHICD VLMDYD L VQS GTAA+IVM+
Sbjct: 309 LIERHAGGVIGGWDNLLGIIPGGSSTPVIPKHICDTVLMDYDDLVRVQSSFGTAAIIVMN 368
Query: 382 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
K TD++ AIARL FYKHESCGQCTPCREG W++ IM+R GNA++ EIDML E+TKQ
Sbjct: 369 KQTDIIKAIARLISFYKHESCGQCTPCREGIAWMYKIMQRFVEGNAEVHEIDMLWELTKQ 428
Query: 442 IEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
IE HTICAL D AAWPVQGLIRHFRPE+E R+
Sbjct: 429 IELHTICALADGAAWPVQGLIRHFRPEIESRM 460
>gi|154253660|ref|YP_001414484.1| NADH dehydrogenase I subunit F [Parvibaculum lavamentivorans DS-1]
gi|154157610|gb|ABS64827.1| NADH-quinone oxidoreductase, F subunit [Parvibaculum
lavamentivorans DS-1]
Length = 429
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/416 (76%), Positives = 367/416 (88%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG+ D LK A RGDW T D++ KG DWI++E+KKSGLRGRGGAGFP
Sbjct: 2 LEDKDRIFTNLYGLQDWRLKAARSRGDWDGTADIIAKGRDWILDEMKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDP KL+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDILRHDPQKLIEGCLIASFAMGAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A EAY AGL+GKNA GSG+DF++++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREQLQAAIDEAYEAGLVGKNAAGSGWDFEIYVHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYG PTTV NVE++AV+PTILRRG WF+S GR NN+GTK
Sbjct: 182 SLEGKKGMPRLKPPFPANVGLYGAPTTVNNVESIAVAPTILRRGATWFSSLGRPNNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN+PC VEEEM IPL+EL+++H GGVRGGWDNLLAVIPGGSSVPLLPK +CDD
Sbjct: 242 LFCISGHVNRPCNVEEEMGIPLRELLEKHAGGVRGGWDNLLAVIPGGSSVPLLPKSVCDD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+LK VQSGLGTAAVIVMDKSTDV+ AIARLS FYKHESCGQCTPCREGTGW+W
Sbjct: 302 VLMDFDSLKNVQSGLGTAAVIVMDKSTDVIKAIARLSAFYKHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+MERL G+A+++EIDML +VTK++EGHTICALGDAAAWPVQGLIRHFR +E RI
Sbjct: 362 VMERLVAGDAEVQEIDMLLDVTKRVEGHTICALGDAAAWPVQGLIRHFRGTIEERI 417
>gi|67538918|ref|XP_663233.1| NUBM_ASPNG NADH-ubiquinone oxidoreductase 51 kDa subunit,
mitochondrial precursor (Complex I-51KD) (CI-51KD)
[Aspergillus nidulans FGSC A4]
gi|40743532|gb|EAA62722.1| NUBM_ASPNG NADH-ubiquinone oxidoreductase 51 kDa subunit,
mitochondrial precursor (Complex I-51KD) (CI-51KD)
[Aspergillus nidulans FGSC A4]
gi|259484902|tpe|CBF81519.1| TPA: NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 497
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/458 (71%), Positives = 376/458 (82%), Gaps = 5/458 (1%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
S+ RS Q + S PP H GGLKD+DRIFTNLYG H LK AMK G
Sbjct: 15 SLSSRSLRLQAPAARSFATVSDNAPPVH--HHGGLKDQDRIFTNLYGHHGADLKSAMKYG 72
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNA 140
DW+RTKD+VLKG DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNA
Sbjct: 73 DWYRTKDIVLKGHDWLISELKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNA 132
Query: 141 DESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAY 200
DE EPGTCKDREIMR DP KL+EGCL+ G M A+AAYIYIRGE+ +E L++A EAY
Sbjct: 133 DEGEPGTCKDREIMRKDPQKLIEGCLVVGRAMNANAAYIYIRGEFYHEATVLQQAINEAY 192
Query: 201 AAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYG 260
AGL+GKNACG+GYDFDV IH G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+G
Sbjct: 193 QAGLIGKNACGTGYDFDVFIHRGMGAYVCGEETSLIESLEGKAGKPRLKPPFPAAVGLFG 252
Query: 261 CPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLK 320
CP+TVTNVETVAV+PTI+RRG WFA FGR+ N+GTKLFC+SGHVN PCTVEEEMSIPL+
Sbjct: 253 CPSTVTNVETVAVTPTIMRRGASWFAGFGRERNAGTKLFCISGHVNNPCTVEEEMSIPLR 312
Query: 321 ELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVM 380
ELIDRHCGGVRGGWDNL AVIPGGSS P++PK +CDD LMD+DALK Q+GLGTAAVIVM
Sbjct: 313 ELIDRHCGGVRGGWDNLKAVIPGGSSTPIIPKSVCDDQLMDFDALKDSQTGLGTAAVIVM 372
Query: 381 DKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTK 440
DKSTDVV AI+RLS FYKHESCGQCTPCREG+ W +M+RL+ G A+ EIDMLQE+TK
Sbjct: 373 DKSTDVVRAISRLSTFYKHESCGQCTPCREGSKWTLQMMQRLEKGQAREREIDMLQELTK 432
Query: 441 QIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
Q+EGHTICALG+A AWP+QGLIRHFRPELE RIKE++E
Sbjct: 433 QVEGHTICALGEAFAWPIQGLIRHFRPELEARIKEYSE 470
>gi|225708652|gb|ACO10172.1| NADH dehydrogenase flavoprotein 1, mitochondrial precursor [Osmerus
mordax]
Length = 472
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/481 (69%), Positives = 381/481 (79%), Gaps = 12/481 (2%)
Query: 7 VLSLQRASLVRCYSERLSVGLRS---FSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 63
+LSL RA L LR+ S G + + P+KT FG L D+DR
Sbjct: 1 MLSLSRA---------LVCALRTPATVSPAGVAAVTRFNSTATQEKPKKTTFGPLSDQDR 51
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWS 123
IFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+NE+K SGLRGRGGAGFP+G+KWS
Sbjct: 52 IFTNLYGRHDWRLKGALSRGDWYKTKEILLKGVDWIINEIKSSGLRGRGGAGFPTGMKWS 111
Query: 124 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 183
FM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG M A AAYIYIRG
Sbjct: 112 FMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVAGRCMGARAAYIYIRG 171
Query: 184 EYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 243
E+ NE NL+ A EAYA GL+G+NACGSGYDFDV + GAGAYICGEETAL+ESLEGKQ
Sbjct: 172 EFYNESSNLQVAINEAYANGLIGRNACGSGYDFDVFVMRGAGAYICGEETALIESLEGKQ 231
Query: 244 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSG 303
GKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WFA FGR+ NSGTKLF +SG
Sbjct: 232 GKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGTWFAGFGRERNSGTKLFNISG 291
Query: 304 HVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 363
HVN P TVEEEMSIPLKELI+RH GGVRGGWDNLLAVIPGGSS P++P+ +C+ VLMD+D
Sbjct: 292 HVNTPVTVEEEMSIPLKELIERHAGGVRGGWDNLLAVIPGGSSTPMIPRSVCETVLMDFD 351
Query: 364 ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 423
L Q+GLGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG W+ +M R
Sbjct: 352 GLIQAQTGLGTAAIIVMDKSTDVIKAIARLIEFYKHESCGQCTPCREGVDWMNTMMWRFV 411
Query: 424 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLE 483
G+AK EIDM+ E++KQIEGHTICALGD AAWPVQGLIRHFRP +E RI E E++
Sbjct: 412 RGDAKEAEIDMIWEISKQIEGHTICALGDGAAWPVQGLIRHFRPVMESRIAEFQEKKQAR 471
Query: 484 A 484
A
Sbjct: 472 A 472
>gi|321467624|gb|EFX78613.1| hypothetical protein DAPPUDRAFT_53209 [Daphnia pulex]
Length = 437
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/435 (76%), Positives = 372/435 (85%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
+T FG LKDEDRIFTNLYG HD L GAMKRGDW++TK+++LKG DWI+NEVKKSGLRGR
Sbjct: 2 QTKFGPLKDEDRIFTNLYGRHDWRLSGAMKRGDWYKTKEILLKGVDWILNEVKKSGLRGR 61
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFPSG+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG
Sbjct: 62 GGAGFPSGMKWSFMNKPSDGRPRYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLIAGRA 121
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGE+ NE N++ A EAY GL+GKNAC SGYDFDV +H GAGAYICGE
Sbjct: 122 MGARAAYIYIRGEFYNEGTNVQVAIHEAYKQGLIGKNACESGYDFDVFVHRGAGAYICGE 181
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG DWF FGR
Sbjct: 182 ETALIESIEGKQGKPRLKPPFPADIGVFGCPTTVANVETVAVAPTICRRGGDWFVGFGRP 241
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NSGTKLF +SGHVN PCTVEEEMSIPL+ELI+RH GV GGWDNLLAVIPGGSS P++P
Sbjct: 242 RNSGTKLFNISGHVNNPCTVEEEMSIPLRELIERHARGVVGGWDNLLAVIPGGSSTPMIP 301
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
+ +CDDVLMD+DAL A Q+GLGTAA+IVM+K TDV+ AIARL FYKHESCGQCTPCREG
Sbjct: 302 RKVCDDVLMDFDALVAAQTGLGTAALIVMNKQTDVIRAIARLIEFYKHESCGQCTPCREG 361
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
TGW+ IM R GNAK EEIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E
Sbjct: 362 TGWMNKIMYRFVEGNAKPEEIDMLWELSKQIEGHTICALGDGAAWPVQGLIRHFRPEIED 421
Query: 472 RIKEHAERELLEATA 486
R+K AER+ + A
Sbjct: 422 RMKRFAERQQCQKVA 436
>gi|121707889|ref|XP_001271969.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Aspergillus
clavatus NRRL 1]
gi|119400117|gb|EAW10543.1| NADH-ubiquinone oxidoreductase, subunit F, putative [Aspergillus
clavatus NRRL 1]
Length = 496
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/457 (71%), Positives = 377/457 (82%), Gaps = 6/457 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RS G++ S PP H GGL+D+DRIFTNLYG H LK AMK GDWHR
Sbjct: 19 RSLRVSGSAARSFATVQDNAPPVR--HHGGLRDQDRIFTNLYGHHGADLKSAMKFGDWHR 76
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKV---SDGRPSYLVVNADESE 144
TKD+V KG DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLV+NADE E
Sbjct: 77 TKDIVNKGDDWLISEIKASGLRGRGGAGFPSGLKYSFMNFKGWDKDPRPRYLVINADEGE 136
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREIMR DPHKL+EGCL+ G M A+AAYIYIRGE+ +E L++A EAY AGL
Sbjct: 137 PGTCKDREIMRKDPHKLIEGCLVVGRAMNANAAYIYIRGEFYHEATVLQQAINEAYQAGL 196
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
+GKNACG+GYDFDV+IH G GAY+CGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+T
Sbjct: 197 IGKNACGTGYDFDVYIHRGMGAYVCGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPST 256
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
VTNVETVAV PTI+RRG WF SFG + NSGTKLFC+SGHVN PCTVEEEMSIPL+ELID
Sbjct: 257 VTNVETVAVCPTIMRRGASWFNSFGAERNSGTKLFCISGHVNNPCTVEEEMSIPLRELID 316
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
RHCGGVRGGWDNLLAVIPGGSS P+LPK +CDD +MD+D+LK QSGLGTAAVIVMDKST
Sbjct: 317 RHCGGVRGGWDNLLAVIPGGSSTPVLPKAVCDDQIMDFDSLKDSQSGLGTAAVIVMDKST 376
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D++ AI+RLS FYKHESCGQCTPCREG+ W IMER++ G A+ EIDMLQE+TKQ+EG
Sbjct: 377 DIIRAISRLSKFYKHESCGQCTPCREGSKWTAQIMERMEKGQAREREIDMLQELTKQVEG 436
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAEREL 481
HTICALG+A AWP+QGLIRHFRPELE RIKE+ E+EL
Sbjct: 437 HTICALGEAFAWPIQGLIRHFRPELEARIKEY-EQEL 472
>gi|326429055|gb|EGD74625.1| NADH dehydrogenase flavoprotein 1 [Salpingoeca sp. ATCC 50818]
Length = 463
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/433 (76%), Positives = 363/433 (83%), Gaps = 4/433 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D DRIF NLYG HD LKGAMKRG W++TKD+VLKG D+I+ EVKKSGLRGRGGAGFP
Sbjct: 31 LQDSDRIFQNLYGKHDWGLKGAMKRGTWYKTKDIVLKGDDFILEEVKKSGLRGRGGAGFP 90
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
SGLKWSFM +D RP YLVVNADE EPGTCKDREIMRHDPH L+EGCL+AG M A AA
Sbjct: 91 SGLKWSFMKGATDDRPKYLVVNADEGEPGTCKDREIMRHDPHMLIEGCLVAGRAMNARAA 150
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ E NL+ A EAY AGL+GKNACGSGYDFDV++ GAGAYICGEETAL+E
Sbjct: 151 YIYIRGEFFQEASNLQVAINEAYDAGLIGKNACGSGYDFDVYLFRGAGAYICGEETALIE 210
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK GKPRLKPPFPAN GL+GCPTTV NVETVAV+PTILRRG DWFA FGRK N GTK
Sbjct: 211 SLEGKTGKPRLKPPFPANVGLFGCPTTVANVETVAVAPTILRRGGDWFAGFGRKRNEGTK 270
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SG+VN PC VEE MSI L+ELID+HCGGV GGWDNLL VIPGGSSVP+LPKHICDD
Sbjct: 271 LFAISGNVNNPCVVEESMSITLRELIDKHCGGVTGGWDNLLGVIPGGSSVPVLPKHICDD 330
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL A +SGLGTAAVIVMDKS D++D IARLS FY HESCGQCTPCREGT WL
Sbjct: 331 VLMDFDALAAEKSGLGTAAVIVMDKSQDIIDCIARLSDFYVHESCGQCTPCREGTTWLAK 390
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI---- 473
+M R G+A EEIDML E+T+QIEGHTICALGDAAAWPVQGLIRHFRPE+E RI
Sbjct: 391 VMHRFVRGDADKEEIDMLYELTRQIEGHTICALGDAAAWPVQGLIRHFRPEIEARIDAYN 450
Query: 474 KEHAERELLEATA 486
K A+ L ATA
Sbjct: 451 KSKADAILDAATA 463
>gi|225682624|gb|EEH20908.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Paracoccidioides
brasiliensis Pb03]
Length = 515
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/443 (73%), Positives = 373/443 (84%), Gaps = 5/443 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q PP +GGLKD+DRIF NLYG H LK A+K GDW++TK++VLKG DW
Sbjct: 48 ATVQDAAATTPPRS--YGGLKDQDRIFQNLYGHHGADLKTAIKYGDWYKTKEIVLKGHDW 105
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR
Sbjct: 106 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMR 165
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCLIAG M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACG+GYD
Sbjct: 166 KDPHKLVEGCLIAGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYGAGLIGKNACGTGYD 225
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV++H G GAYICGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 226 FDVYLHRGMGAYICGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 285
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI+RHCGGVRGGWD
Sbjct: 286 TICRRGGKWFASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWD 345
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKH+CDD +MD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS
Sbjct: 346 NLLAVIPGGSSTPILPKHVCDDQMMDFDALKDAQSGLGTAAVIVMDKSTDVVAAISRLSA 405
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W +M+R + G A+ EIDM+QE+TKQ+EGHTICALG+A +
Sbjct: 406 FYKHESCGQCTPCREGSKWTAQMMQRFERGQAREREIDMIQELTKQVEGHTICALGEAFS 465
Query: 456 WPVQGLIRHFRPELERRIKEHAE 478
WP+QGLIRHFRPELE RI+ + +
Sbjct: 466 WPIQGLIRHFRPELEARIRNYEQ 488
>gi|336262095|ref|XP_003345833.1| hypothetical protein SMAC_07117 [Sordaria macrospora k-hell]
gi|380088607|emb|CCC13493.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 493
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/436 (73%), Positives = 372/436 (85%), Gaps = 3/436 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H+GGLKD+DRIF NLYG + P LK A K GDWH+TK+++LKG DWI+ EVK SGLRGRGG
Sbjct: 40 HYGGLKDQDRIFQNLYGRYPPDLKHAKKMGDWHKTKEILLKGHDWIIGEVKASGLRGRGG 99
Query: 114 AGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
AGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 100 AGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVAGR 159
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A+AAYIYIRGE+++E L+ A EAYA GL+GKNACGSGYDFDV+IH GAGAY+CG
Sbjct: 160 AMNATAAYIYIRGEFIHEAAVLQNAINEAYADGLIGKNACGSGYDFDVYIHRGAGAYVCG 219
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG +WFASFGR
Sbjct: 220 EETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGNWFASFGR 279
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ N GTKL+C+SGHVN PCTVEEEMSIP++ELID+HCGGVRGGWDNLLAVIPGGSS P+L
Sbjct: 280 ERNQGTKLYCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWDNLLAVIPGGSSTPIL 339
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PKHICDD LMD+DALK QSGLGTAA+IVMDKSTDVV AI+RLS+FY+HESCGQCTPCRE
Sbjct: 340 PKHICDDQLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRLSHFYRHESCGQCTPCRE 399
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE
Sbjct: 400 GSKWTEQIMKRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELE 459
Query: 471 RRIKEHAERELLEATA 486
R+++ A+ EA A
Sbjct: 460 ARMQKFAQENGGEALA 475
>gi|410974648|ref|XP_003993755.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 2 [Felis catus]
Length = 455
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/435 (74%), Positives = 367/435 (84%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK
Sbjct: 13 PARTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FASFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRIKEHAER 479
FRPELE R++ A +
Sbjct: 433 FRPELEERMQRFARQ 447
>gi|226290045|gb|EEH45529.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Paracoccidioides
brasiliensis Pb18]
Length = 515
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/443 (73%), Positives = 373/443 (84%), Gaps = 5/443 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q PP +GGLKD+DRIF NLYG H LK A+K GDW++TK++VLKG DW
Sbjct: 48 ATVQDAAATTPPRS--YGGLKDQDRIFQNLYGHHGADLKTAIKYGDWYKTKEIVLKGHDW 105
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR
Sbjct: 106 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMR 165
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCLIAG M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACG+GYD
Sbjct: 166 KDPHKLVEGCLIAGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYGAGLIGKNACGTGYD 225
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV++H G GAYICGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 226 FDVYLHRGMGAYICGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 285
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI+RHCGGVRGGWD
Sbjct: 286 TICRRGGKWFASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWD 345
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKH+CDD +MD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS
Sbjct: 346 NLLAVIPGGSSTPILPKHVCDDQMMDFDALKDAQSGLGTAAVIVMDKSTDVVAAISRLSA 405
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W +M+R + G A+ EIDM+QE+TKQ+EGHTICALG+A +
Sbjct: 406 FYKHESCGQCTPCREGSKWTAQMMQRFERGQAREREIDMIQELTKQVEGHTICALGEAFS 465
Query: 456 WPVQGLIRHFRPELERRIKEHAE 478
WP+QGLIRHFRPELE RI+ + +
Sbjct: 466 WPIQGLIRHFRPELEARIRNYEQ 488
>gi|410974646|ref|XP_003993754.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 1 [Felis catus]
Length = 464
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/430 (75%), Positives = 366/430 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIKEHAER 479
E R++ A +
Sbjct: 447 EERMQRFARQ 456
>gi|311247120|ref|XP_003122487.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like isoform 2 [Sus scrofa]
Length = 455
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/433 (75%), Positives = 367/433 (84%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK
Sbjct: 13 PARTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FASFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVIGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRIKEHA 477
FRPELE R+++ A
Sbjct: 433 FRPELEERMQQFA 445
>gi|167523547|ref|XP_001746110.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775381|gb|EDQ89005.1| predicted protein [Monosiga brevicollis MX1]
Length = 463
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/427 (75%), Positives = 366/427 (85%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H+GGL D+DR+F NLYG HD LKGA+KRG W++TK++V G+D+I++EVKKSGLRGRGG
Sbjct: 27 HYGGLADDDRVFQNLYGRHDWGLKGALKRGTWYKTKNIVEAGSDFILDEVKKSGLRGRGG 86
Query: 114 AGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMR 173
AGFPSGLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPH LLEGCL+AG M
Sbjct: 87 AGFPSGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHTLLEGCLVAGRAMG 146
Query: 174 ASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEET 233
A AAYIYIRGE+ E NL+ A EAY GL+GKNACGSGYDFD+ + GAGAYICGEET
Sbjct: 147 AQAAYIYIRGEFFQEASNLQVAINEAYDKGLIGKNACGSGYDFDIFLFRGAGAYICGEET 206
Query: 234 ALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNN 293
AL+ES+EGK GKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG DWFASFGR+ N
Sbjct: 207 ALIESIEGKTGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGGDWFASFGRERN 266
Query: 294 SGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKH 353
SGTKLF +SG+VNKPC VEEEMSI L+EL+++HCGGV GGWDNLL VIPGGSSVP+LPKH
Sbjct: 267 SGTKLFAISGNVNKPCVVEEEMSISLRELLEKHCGGVTGGWDNLLGVIPGGSSVPVLPKH 326
Query: 354 ICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTG 413
ICDDV+MD+DAL A +SGLGTAAVIVMDKS D++D IARLS FY HESCGQCTPCREGT
Sbjct: 327 ICDDVMMDFDALVAEKSGLGTAAVIVMDKSQDIIDCIARLSDFYVHESCGQCTPCREGTT 386
Query: 414 WLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
WL +M R G+A EEIDML E+T+QIEGHTICALGDAAAWPVQGLIRHFRPE+E RI
Sbjct: 387 WLSKVMRRFVSGDADKEEIDMLYELTRQIEGHTICALGDAAAWPVQGLIRHFRPEIEARI 446
Query: 474 KEHAERE 480
+ + +
Sbjct: 447 DAYNQNK 453
>gi|311247118|ref|XP_003122486.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like isoform 1 [Sus scrofa]
Length = 464
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/428 (75%), Positives = 366/428 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVIGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIKEHA 477
E R+++ A
Sbjct: 447 EERMQQFA 454
>gi|452000912|gb|EMD93372.1| hypothetical protein COCHEDRAFT_1131599 [Cochliobolus
heterostrophus C5]
Length = 507
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/468 (70%), Positives = 377/468 (80%), Gaps = 9/468 (1%)
Query: 22 RLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMK 81
RLS S TQ + A+ PP K +GGLKD+DRIF NLYG H LK AMK
Sbjct: 28 RLSTAAPSNRTQKRTLATVQDTPP------KRTYGGLKDQDRIFQNLYGHHGADLKSAMK 81
Query: 82 RGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVV 138
GDW++TK+++LKG DWI++E+K SGLRGRGGAGFPSGLKWSFM D +P YLVV
Sbjct: 82 YGDWYKTKEIILKGHDWIISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDDKPRYLVV 141
Query: 139 NADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQE 198
NADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+RA QE
Sbjct: 142 NADEGEPGTCKDREIMRKDPHKLIEGCLVAGRAMNATAAYIYIRGEFYHEATVLQRAIQE 201
Query: 199 AYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGL 258
AY AGL+GKNACGSGYDFDV+IH G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL
Sbjct: 202 AYQAGLIGKNACGSGYDFDVYIHRGMGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGL 261
Query: 259 YGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIP 318
+GCP+TV NVET+AV+PTI RRG WFASFGR+ N GTKLF +SGHVN PCTVEEEMSIP
Sbjct: 262 FGCPSTVANVETIAVAPTICRRGGSWFASFGRERNQGTKLFAISGHVNHPCTVEEEMSIP 321
Query: 319 LKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVI 378
L+ELI++HCGGVRGGWDNL AVIPGGSS P+LPKHICDD LMD+DALK QSG GTAAVI
Sbjct: 322 LRELIEKHCGGVRGGWDNLKAVIPGGSSTPILPKHICDDQLMDFDALKDSQSGFGTAAVI 381
Query: 379 VMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEV 438
VMDKSTDVV AI RL+ FY HESCGQCTPCREG+ W IM+R G A+ EIDMLQE+
Sbjct: 382 VMDKSTDVVRAITRLAKFYHHESCGQCTPCREGSKWTHQIMDRFYKGQAREREIDMLQEL 441
Query: 439 TKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RIK++ + EA A
Sbjct: 442 TKQVEGHTICALGEAFAWPLQGLIRHFRPELEARIKDYGLKHGGEALA 489
>gi|451854754|gb|EMD68046.1| hypothetical protein COCSADRAFT_167314 [Cochliobolus sativus
ND90Pr]
Length = 507
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/490 (68%), Positives = 384/490 (78%), Gaps = 11/490 (2%)
Query: 2 APMKGVLS--LQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLK 59
AP + LS RA + RLS S TQ + A+ PP K +GGLK
Sbjct: 6 APAQKALSAATHRALPAASAATRLSTAAPSNRTQKRTLATVQDTPP------KRTYGGLK 59
Query: 60 DEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSG 119
D+DRIF NLYG H LK AMK GDW++TK+++LKG DWI++E+K SGLRGRGGAGFPSG
Sbjct: 60 DQDRIFQNLYGHHGADLKSAMKYGDWYKTKEILLKGHDWIISEIKASGLRGRGGAGFPSG 119
Query: 120 LKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
LKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG M A+A
Sbjct: 120 LKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVAGRAMNATA 179
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ +E L+RA QEAY AGL+GKNACGSGYDFDV+IH G GAY+CGEET+L+
Sbjct: 180 AYIYIRGEFYHEATVLQRAIQEAYQAGLIGKNACGSGYDFDVYIHRGMGAYVCGEETSLI 239
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG WFA FGR+ N GT
Sbjct: 240 ESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGSWFAGFGRERNQGT 299
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN PCTVEEEMSIPL+ELI++HCGGVRGGWDNL AVIPGGSS P+LPKHICD
Sbjct: 300 KLFAISGHVNHPCTVEEEMSIPLRELIEKHCGGVRGGWDNLKAVIPGGSSTPILPKHICD 359
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D LMD+DALK QSG GTAAVIVMDKSTDVV AI RL+ FY HESCGQCTPCREG+ W
Sbjct: 360 DQLMDFDALKDSQSGFGTAAVIVMDKSTDVVRAITRLAKFYHHESCGQCTPCREGSKWTH 419
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IM+R G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RIK++
Sbjct: 420 QIMDRFYKGQAREREIDMLQELTKQVEGHTICALGEAFAWPLQGLIRHFRPELEARIKDY 479
Query: 477 AERELLEATA 486
+ EA A
Sbjct: 480 GLKHGGEALA 489
>gi|425766116|gb|EKV04743.1| hypothetical protein PDIG_87350 [Penicillium digitatum PHI26]
gi|425778868|gb|EKV16970.1| hypothetical protein PDIP_33370 [Penicillium digitatum Pd1]
Length = 495
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/457 (70%), Positives = 381/457 (83%), Gaps = 7/457 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RS QGA+ S PP H+GGLKD+DRIFTNLYG H LK +MK GDW+R
Sbjct: 19 RSLRAQGAAARSFASVSEAPPV---KHYGGLKDQDRIFTNLYGHHGTDLKSSMKYGDWYR 75
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESE 144
TKD++LKG DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNADE E
Sbjct: 76 TKDMILKGDDWLISEIKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGE 135
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREIMR DP KL+EGCL+ G M A+AAYIYIRGE+ +E L+RA EAY AGL
Sbjct: 136 PGTCKDREIMRKDPQKLIEGCLVVGRAMNANAAYIYIRGEFYHEATVLQRAINEAYEAGL 195
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
+GKNACG+GYDFDV+IH G GAYICGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+T
Sbjct: 196 IGKNACGTGYDFDVYIHRGMGAYICGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPST 255
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
VTNVETVAV+PTI+RRG +WF+SFGR+ N+GTKLFC+SGHVN P TVEEEMSI L+ELI+
Sbjct: 256 VTNVETVAVTPTIMRRGANWFSSFGRERNAGTKLFCISGHVNNPVTVEEEMSISLRELIE 315
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
+HCGGVRGGWDNLLAVIPGGSS P++PK + D+ LMD+DALK Q+GLGTAAVIVMDKST
Sbjct: 316 KHCGGVRGGWDNLLAVIPGGSSTPVIPKSVADNQLMDFDALKDSQTGLGTAAVIVMDKST 375
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+V AI+RLS FYKHESCGQCTPCREG+ W +M+RL+ GNA+ EIDMLQE+TKQ+EG
Sbjct: 376 DIVRAISRLSTFYKHESCGQCTPCREGSKWTMQMMQRLETGNAREREIDMLQELTKQVEG 435
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAEREL 481
HTICALG+A AWP+QGLIRHFRPELE RI+++ E+EL
Sbjct: 436 HTICALGEAFAWPIQGLIRHFRPELEARIRQY-EKEL 471
>gi|407775147|ref|ZP_11122443.1| NADH dehydrogenase I subunit F [Thalassospira profundimaris WP0211]
gi|407282095|gb|EKF07655.1| NADH dehydrogenase I subunit F [Thalassospira profundimaris WP0211]
Length = 426
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/422 (77%), Positives = 369/422 (87%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D LKGA RG+W TK L+ KG DWI++E+K SG+RGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGFQDFGLKGAQSRGNWDGTKALIEKGRDWIIDEMKASGMRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADE EPGTCKDREIMR+DPH L+EGCL+A M A AA
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADEGEPGTCKDREIMRNDPHTLVEGCLLASFAMNAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ +E NL+RA EAY AGL+GKNACGSG+DFD+++H GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEFYHEASNLQRAIDEAYEAGLIGKNACGSGWDFDLYLHLGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPANAGLYGCPTTV NVE++A PTILRRG WFA FGR+NN GTK
Sbjct: 182 SLEGKKGQPRLKPPFPANAGLYGCPTTVNNVESIAAVPTILRRGGSWFAGFGRENNHGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHV KPCTVEE MSIPLKELI++HCGGVRGGWDNLLAVIPGGSSVPL+PK +CDD
Sbjct: 242 LFAISGHVEKPCTVEEAMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLMPKDVCDD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D L+ V SGLGTAAVIVMDKSTD+V AIARLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 VLMDFDGLREVGSGLGTAAVIVMDKSTDIVYAIARLSEFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M R+ G A L+EID+L +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRIKE+
Sbjct: 362 MMTRMVRGEATLDEIDLLWDVTKQVEGHTICALGDAAAWPIQGLIRHFRPEMERRIKEYR 421
Query: 478 ER 479
R
Sbjct: 422 AR 423
>gi|338712259|ref|XP_001917609.2| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Equus caballus]
Length = 455
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/429 (75%), Positives = 364/429 (84%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK
Sbjct: 13 PARTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FASFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL QSGLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCETVLMDFDALVQAQSGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRI 473
FRPELE R+
Sbjct: 433 FRPELEERM 441
>gi|342880200|gb|EGU81374.1| hypothetical protein FOXB_08103 [Fusarium oxysporum Fo5176]
Length = 486
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/466 (70%), Positives = 381/466 (81%), Gaps = 11/466 (2%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
+VGL + +G +T P K +GGL+D+DRIF NLY + LK A K G
Sbjct: 11 AVGLSRTAVRGLATVQDGAP--------KRTYGGLRDQDRIFQNLYNRYPVDLKSARKMG 62
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNA 140
DWH+TK+++LKG DWI++EVK SGLRGRGGAGFPSGLKWSFM D +P YLVVNA
Sbjct: 63 DWHKTKEIILKGHDWIISEVKASGLRGRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNA 122
Query: 141 DESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAY 200
DE EPGTCKDREIMR DPHKL+EGCLI+G M A+AAYIYIRGE+V E L+RA EAY
Sbjct: 123 DEGEPGTCKDREIMRKDPHKLIEGCLISGRAMNATAAYIYIRGEFVEEAAVLQRAINEAY 182
Query: 201 AAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYG 260
AAGL+GKNAC SGYDFDV++H GAGAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+G
Sbjct: 183 AAGLIGKNACDSGYDFDVYLHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFG 242
Query: 261 CPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLK 320
CP+TVTNVETVAV+PTI RRG WFA FGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+
Sbjct: 243 CPSTVTNVETVAVAPTICRRGGSWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLR 302
Query: 321 ELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVM 380
ELID+HCGGVRGGWDNLLAVIPGGSS P+LPKH+CDD LMD+DALK QSGLGTAAVIVM
Sbjct: 303 ELIDKHCGGVRGGWDNLLAVIPGGSSTPVLPKHVCDDQLMDFDALKDSQSGLGTAAVIVM 362
Query: 381 DKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTK 440
DKSTD+V AI+RLS+FY+HESCGQCTPCREG+ W +M+R + G A+ EIDMLQE+TK
Sbjct: 363 DKSTDIVRAISRLSHFYRHESCGQCTPCREGSKWTEQMMKRFEKGQAREREIDMLQELTK 422
Query: 441 QIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
Q+EGHTICALG+A AWP+QGLIRHFRPELE RI++ ++ EA A
Sbjct: 423 QVEGHTICALGEAFAWPIQGLIRHFRPELEARIQKFSQEHGGEALA 468
>gi|296283840|ref|ZP_06861838.1| NADH dehydrogenase I subunit F [Citromicrobium bathyomarinum JL354]
Length = 431
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/422 (75%), Positives = 365/422 (86%), Gaps = 1/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D LK A RGDW TK L+ KG D I++++K SGLRGRGGAGFP
Sbjct: 3 LQDKDRIFTNLYGFQDWGLKAAQARGDWDDTKALLAKGQDSIIDDMKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREIMRHDPHKL+EG L+AG MRA A
Sbjct: 63 TGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIMRHDPHKLIEGALVAGFAMRARA 122
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L++A EAY AGL+GKNACGSGYD+DV +H GAGAYICGEETAL+
Sbjct: 123 AYIYIRGEYIREAETLQKAIDEAYDAGLIGKNACGSGYDYDVFLHRGAGAYICGEETALI 182
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRRGP WFASFGR+ N GT
Sbjct: 183 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPSWFASFGREKNDGT 242
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHV KPC VEEEMSIP +ELI+RHCGGVRGGWDNLLAVIPGGSSVPL+P
Sbjct: 243 KLFQISGHVEKPCVVEEEMSIPFRELIERHCGGVRGGWDNLLAVIPGGSSVPLVPAEQIM 302
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LK + SGLGTAAVIVMDKSTD+V AI+R+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 303 DAPMDFDGLKELGSGLGTAAVIVMDKSTDIVRAISRISYFYKHESCGQCTPCREGTGWMW 362
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+RL+ G+A ++EIDML VTKQ+EGHTICALGDAAAWP+QGLIRHFRPELERRI E
Sbjct: 363 RVMKRLETGDADIDEIDMLHTVTKQVEGHTICALGDAAAWPIQGLIRHFRPELERRIAER 422
Query: 477 AE 478
E
Sbjct: 423 GE 424
>gi|225713920|gb|ACO12806.1| NADH dehydrogenase flavoprotein 1, mitochondrial precursor
[Lepeophtheirus salmonis]
Length = 463
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/425 (77%), Positives = 366/425 (86%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
KT FG LKD DRIFTNLYG HD LKGAM RGDW++TK++VLKGADWI+NEVK SGLRGR
Sbjct: 28 KTKFGPLKDSDRIFTNLYGRHDWRLKGAMSRGDWYKTKEIVLKGADWIINEVKVSGLRGR 87
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFPSG+KWSFM K DGRP YLV+NADE EPGTCKDREIMRHDPHKL+EGCLIAG
Sbjct: 88 GGAGFPSGMKWSFMQKPDDGRPKYLVINADEGEPGTCKDREIMRHDPHKLIEGCLIAGRA 147
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIY+RGE+ NE NL+ A +EAY G LGKN+CG+GYDFDV +H GAGAYICGE
Sbjct: 148 MGARAAYIYVRGEFYNETTNLQVAIKEAYTKGFLGKNSCGTGYDFDVFVHRGAGAYICGE 207
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTVTNVETVAV+PTI RRG WF+SFGR
Sbjct: 208 ETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPTICRRGGTWFSSFGRP 267
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N+GTKLF VSGHVN PCTVEEEMS+PLKELI+RH GGV GGWDNLLAVIPGGSS PL+P
Sbjct: 268 RNTGTKLFNVSGHVNNPCTVEEEMSVPLKELIERHAGGVIGGWDNLLAVIPGGSSTPLIP 327
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
KH+C+DV+MD+DAL A Q+GLGTAAVIVM+K DVV AIARL+ FYKHESCGQCTPCREG
Sbjct: 328 KHVCNDVMMDFDALIAAQTGLGTAAVIVMNKQCDVVKAIARLATFYKHESCGQCTPCREG 387
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
W+ +M R GNA+ EIDML E+TKQIEGHTICAL D AAWPVQGLIRHFRPELE
Sbjct: 388 CNWMDTMMWRFVEGNAQAGEIDMLWELTKQIEGHTICALADGAAWPVQGLIRHFRPELEA 447
Query: 472 RIKEH 476
R +E+
Sbjct: 448 RFEEY 452
>gi|2499312|sp|Q92406.1|NDUV1_ASPNG RecName: Full=NADH-ubiquinone oxidoreductase 51 kDa subunit,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; Flags: Precursor
gi|1556376|emb|CAA45744.1| 51kDa subunit of NADH:ubiquinone reductase (complex I) [Aspergillus
niger]
Length = 496
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/447 (72%), Positives = 376/447 (84%), Gaps = 7/447 (1%)
Query: 35 ASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLK 94
A + +T Q PP H+GGLKD+DRIFTNLYG H LK AMK GDWHRTKD+VLK
Sbjct: 27 ARSFATVQDNAPPV----KHYGGLKDQDRIFTNLYGHHGADLKSAMKYGDWHRTKDIVLK 82
Query: 95 GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDR 151
G DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNADE EPGTCKDR
Sbjct: 83 GHDWLISELKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDR 142
Query: 152 EIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACG 211
EIMR DP KL+EGCL+ G M A+AAY+YIRGE+ E L+RA EAY AGL+GKNACG
Sbjct: 143 EIMRKDPQKLIEGCLVVGRAMNANAAYMYIRGEFYQEATVLQRAINEAYEAGLIGKNACG 202
Query: 212 SGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETV 271
+GYDFDV+IH G GAY+CGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETV
Sbjct: 203 TGYDFDVYIHRGMGAYVCGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETV 262
Query: 272 AVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVR 331
AV+PTI+RRG WF+SFGR+ N+GTKLFC+SGHVN PCTVEEEMSI L+++IDRHCGGVR
Sbjct: 263 AVTPTIMRRGASWFSSFGRERNAGTKLFCISGHVNNPCTVEEEMSISLRDVIDRHCGGVR 322
Query: 332 GGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIA 391
GGWDNLLAVIPGGSS P+LPK ICDD LMD+DALK QSGLGTAAVIVMDKSTD+V AI+
Sbjct: 323 GGWDNLLAVIPGGSSTPVLPKTICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRAIS 382
Query: 392 RLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALG 451
RLS FYKHESCGQCTPCREG+ W +M+R++ G A+ EIDMLQE+TKQ+EGHTICALG
Sbjct: 383 RLSTFYKHESCGQCTPCREGSKWTMHMMQRMEKGQAREREIDMLQELTKQVEGHTICALG 442
Query: 452 DAAAWPVQGLIRHFRPELERRIKEHAE 478
+A AWP+QGLIRHFRPELE RI+E+++
Sbjct: 443 EAFAWPIQGLIRHFRPELEARIREYSK 469
>gi|115391293|ref|XP_001213151.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
gi|114194075|gb|EAU35775.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
Length = 496
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/428 (74%), Positives = 371/428 (86%), Gaps = 3/428 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H+GGL+D+DRIFTNLYG H LK AMK GDW+RTKD+VLKG DW+++E+K SGLRGRGG
Sbjct: 43 HYGGLQDKDRIFTNLYGHHGADLKSAMKYGDWYRTKDIVLKGHDWLISELKASGLRGRGG 102
Query: 114 AGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
AGFPSGLK+SFM D RP YLVVNADE EPGTCKDREIMR DP KL+EGCL+ G
Sbjct: 103 AGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDREIMRKDPQKLIEGCLVVGR 162
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A+AAYIYIRGE+ +E L+RA EAY AGL+GKNACG+GYDFDV+IH G GAY+CG
Sbjct: 163 AMNANAAYIYIRGEFYHEATVLQRAINEAYEAGLIGKNACGTGYDFDVYIHRGMGAYVCG 222
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EET+L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+PTI+RRG WF+SFGR
Sbjct: 223 EETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVTPTIMRRGASWFSSFGR 282
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTKLFC+SGHVN PCTVEEEMSIPLKELI++HCGGVRGGWDNLLAVIPGGSS P++
Sbjct: 283 ERNSGTKLFCISGHVNNPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSTPVI 342
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +CDD LMD+DALK Q+GLGTAAV+VMDKSTD+V AI+RLS FYKHESCGQCTPCRE
Sbjct: 343 PKSVCDDQLMDFDALKDSQTGLGTAAVVVMDKSTDIVRAISRLSTFYKHESCGQCTPCRE 402
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G+ W +M+RL+ G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPE+E
Sbjct: 403 GSKWTMQMMQRLETGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPEIE 462
Query: 471 RRIKEHAE 478
RI+E+++
Sbjct: 463 ARIQEYSK 470
>gi|367029799|ref|XP_003664183.1| hypothetical protein MYCTH_2306712 [Myceliophthora thermophila ATCC
42464]
gi|347011453|gb|AEO58938.1| hypothetical protein MYCTH_2306712 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/478 (69%), Positives = 383/478 (80%), Gaps = 15/478 (3%)
Query: 13 ASLVRCYSERLSVGLRSFST-QGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGM 71
+S V S RSF+T Q A+ A+T + +GGL+D+DRIF NLYG
Sbjct: 17 SSAVSAISTTTPSQCRSFATVQDANAAATVRT-----------YGGLRDQDRIFQNLYGR 65
Query: 72 HDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS-- 129
P LK A K GDWH+TK+++LKG DWI+NE+K SGLRGRGGAGFPSGLKWSFM
Sbjct: 66 FPPDLKHAKKMGDWHKTKEILLKGHDWIINEIKTSGLRGRGGAGFPSGLKWSFMNFKDWD 125
Query: 130 -DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNE 188
D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG M ASAAYIYIRGE+V E
Sbjct: 126 KDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRAMNASAAYIYIRGEFVQE 185
Query: 189 RKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRL 248
L+ A EAYA GL+GKNACGSGYDFDV+IH GAGAY+CGEET+L+ESLEGK GKPRL
Sbjct: 186 AAILQNAINEAYAEGLIGKNACGSGYDFDVYIHRGAGAYVCGEETSLIESLEGKPGKPRL 245
Query: 249 KPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKP 308
KPPFPA GL+GCP+TV NVETVAV+PTI RRG WFASFGR+ N GTKLFC+SGHVN P
Sbjct: 246 KPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGSWFASFGRERNQGTKLFCISGHVNNP 305
Query: 309 CTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAV 368
CTVEEEMSIP++ELI++HCGGVRGGWDNL AVIPGGSS P+LPKH+CDD LMD+DALK
Sbjct: 306 CTVEEEMSIPMRELIEKHCGGVRGGWDNLQAVIPGGSSTPILPKHVCDDQLMDFDALKDS 365
Query: 369 QSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAK 428
QSGLGTAAVIVMDKS DVV AI+RLS+FY+HESCGQCTPCREG+ W IM+R + G +
Sbjct: 366 QSGLGTAAVIVMDKSADVVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMKRFEKGMGR 425
Query: 429 LEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE R+++ A+ EA A
Sbjct: 426 EREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARMQKFAKETGGEALA 483
>gi|389877830|ref|YP_006371395.1| NADH dehydrogenase I subunit F [Tistrella mobilis KA081020-065]
gi|388528614|gb|AFK53811.1| NADH dehydrogenase I subunit F [Tistrella mobilis KA081020-065]
Length = 426
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/413 (78%), Positives = 363/413 (87%), Gaps = 1/413 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNL+G D L GA RGDW TKD++ KGADWIV E+K SGLRGRGGAGFP
Sbjct: 2 LRDQDRIFTNLHGYDDFRLAGARHRGDWDGTKDIIAKGADWIVQEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +D RPSYLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M+A AA
Sbjct: 62 TGVKWSFMPK-NDPRPSYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGFAMKAVAA 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ E + L+ A EAY AGL+GKNACG+GYDFDV+IH GAGAYICGEETAL+E
Sbjct: 121 YIYIRGEFLREAQALQTAIDEAYEAGLIGKNACGTGYDFDVYIHLGAGAYICGEETALIE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRR WFA GR+NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPAMAGLYGCPTTVNNVESIAVAPTILRRSAAWFAGLGRENNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+F +SGHVNKPC +EEEM IPLKELI+RH GGVRGGWDNLLA+IPGGSSVPLLPK ICDD
Sbjct: 241 IFSISGHVNKPCNIEEEMGIPLKELIERHAGGVRGGWDNLLAIIPGGSSVPLLPKSICDD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+AV+SGLGTAAVIVMDKSTDVV AIARLS FY HESCGQCTPCREGTGWLW
Sbjct: 301 VLMDFDSLRAVKSGLGTAAVIVMDKSTDVVRAIARLSKFYMHESCGQCTPCREGTGWLWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
M+R+ G A + EID L++VT QIEGHTICALGDAAAWPVQGLIRHFRPELE
Sbjct: 361 TMDRMVKGQATVAEIDRLEQVTYQIEGHTICALGDAAAWPVQGLIRHFRPELE 413
>gi|417410776|gb|JAA51854.1| Putative nadh:ubiquinone oxidoreductase ndufv1/51kda subunit,
partial [Desmodus rotundus]
Length = 447
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/432 (75%), Positives = 366/432 (84%)
Query: 43 PPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNE 102
P P P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E
Sbjct: 3 PLCPQTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGE 62
Query: 103 VKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLL 162
+K SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+
Sbjct: 63 IKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLV 122
Query: 163 EGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHY 222
EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV +
Sbjct: 123 EGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVR 182
Query: 223 GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP 282
GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG
Sbjct: 183 GAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGG 242
Query: 283 DWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIP 342
WFASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIP
Sbjct: 243 AWFASFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIP 302
Query: 343 GGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESC 402
GGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STDVV AIARL FYKHESC
Sbjct: 303 GGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDVVKAIARLIEFYKHESC 362
Query: 403 GQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
GQCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLI
Sbjct: 363 GQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLI 422
Query: 463 RHFRPELERRIK 474
RHFRPELE R++
Sbjct: 423 RHFRPELEDRMQ 434
>gi|332373616|gb|AEE61949.1| unknown [Dendroctonus ponderosae]
Length = 473
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/427 (74%), Positives = 366/427 (85%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
KT FG L DEDR+FTNLYG HD LKGAMKRGDW++TK+++LKG+DWIVNE+K SGLRGR
Sbjct: 40 KTSFGPLADEDRVFTNLYGRHDWRLKGAMKRGDWYKTKEILLKGSDWIVNELKTSGLRGR 99
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFP+G+KWSFM + DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG
Sbjct: 100 GGAGFPTGMKWSFMNRPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRA 159
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
+ A AAYIYIRGE+ NE N++ A EAY AG LGKNACGSGYDFDV +H GAGAYICGE
Sbjct: 160 IGAKAAYIYIRGEFYNEASNMQVAIAEAYQAGFLGKNACGSGYDFDVFMHRGAGAYICGE 219
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVET+AVSP+I RRG WFASFGR
Sbjct: 220 ETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVNNVETIAVSPSICRRGGPWFASFGRT 279
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NSGTKLF +SGHVN+PCTVEEEMSIPLKEL++ H GGV+GGWDNLLA+IPGGSS PL+P
Sbjct: 280 RNSGTKLFNISGHVNRPCTVEEEMSIPLKELVEIHAGGVQGGWDNLLAIIPGGSSTPLIP 339
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +C+DVLMD+D L A Q+ LGTAA+IVM+K TD+V AIARL FYKHESCGQCTPCREG
Sbjct: 340 KSVCEDVLMDFDGLVAAQTSLGTAALIVMNKQTDIVKAIARLIMFYKHESCGQCTPCREG 399
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
W+ ++ R GNAK EEIDML E++KQIEG +ICAL D AAWPVQGLIRHFRPELE
Sbjct: 400 VNWMNKMIYRFVDGNAKPEEIDMLWEISKQIEGRSICALADGAAWPVQGLIRHFRPELED 459
Query: 472 RIKEHAE 478
R+++ AE
Sbjct: 460 RMRKFAE 466
>gi|171682190|ref|XP_001906038.1| hypothetical protein [Podospora anserina S mat+]
gi|170941054|emb|CAP66704.1| unnamed protein product [Podospora anserina S mat+]
Length = 497
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/440 (73%), Positives = 370/440 (84%), Gaps = 4/440 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P +T +GGL+D+DRIF NLYG P LK A K GDWH+TK+++LKG DWI+ E+K SGLR
Sbjct: 41 PSRT-YGGLRDQDRIFQNLYGRFPPDLKSAKKMGDWHKTKEILLKGHDWIIGEIKASGLR 99
Query: 110 GRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 100 GRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCL 159
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M ASAAYIYIRGE+++E L+ A EAYA GL+GKNACGSGYDFDV++H G GA
Sbjct: 160 VAGRAMNASAAYIYIRGEFIHEAAVLQNAINEAYADGLIGKNACGSGYDFDVYVHRGGGA 219
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVETVAV+PTI RRG WFA
Sbjct: 220 YVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGSWFA 279
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGVRGGWDNLLAVIPGGSS
Sbjct: 280 GFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVRGGWDNLLAVIPGGSS 339
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P+LPKH+CDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCT
Sbjct: 340 TPILPKHVCDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCT 399
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFR
Sbjct: 400 PCREGSKWTEQIMQRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFR 459
Query: 467 PELERRIKEHAERELLEATA 486
PELE R+++ A+ EA A
Sbjct: 460 PELEARMQKFAQENGGEALA 479
>gi|440473381|gb|ELQ42182.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Magnaporthe oryzae
Y34]
Length = 1019
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/457 (70%), Positives = 374/457 (81%), Gaps = 6/457 (1%)
Query: 33 QGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLV 92
Q A + +T Q P P K +GGL+D+DRIF NLYG + P LK A K GDWH+TK+++
Sbjct: 26 QPARSFATVQDGTPAP---KRTYGGLRDQDRIFQNLYGRYPPDLKHAKKMGDWHKTKEII 82
Query: 93 LKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCK 149
LKG DWI+ E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCK
Sbjct: 83 LKGHDWIIGEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCK 142
Query: 150 DREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNA 209
DREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+ A EAYA GL+GKNA
Sbjct: 143 DREIMRKDPHKLIEGCLVAGRAMNATAAYIYIRGEFYHEAAVLQGAINEAYADGLIGKNA 202
Query: 210 CGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVE 269
CGSGYDFDV +H G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVE
Sbjct: 203 CGSGYDFDVFVHRGGGAYVCGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVANVE 262
Query: 270 TVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGG 329
T+AV+PTI RRG WFA FGR+ N GTKLFC+SG VN PCTVEEEMSIP++ELI++HCGG
Sbjct: 263 TIAVAPTICRRGGSWFAGFGRERNQGTKLFCISGQVNNPCTVEEEMSIPMRELIEKHCGG 322
Query: 330 VRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDA 389
VRGGWDNLLAVIPGGSS P+LPK+ICDD LMD+DALK QSGLGTAAVIVMDKS DVV A
Sbjct: 323 VRGGWDNLLAVIPGGSSTPILPKNICDDQLMDFDALKDSQSGLGTAAVIVMDKSADVVRA 382
Query: 390 IARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICA 449
IARLS+FY+HESCGQCTPCREG+ W IM R + G ++ EIDMLQE+TKQ+EGHTICA
Sbjct: 383 IARLSHFYRHESCGQCTPCREGSKWTEQIMHRFEHGQGRVREIDMLQELTKQVEGHTICA 442
Query: 450 LGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
LG+A AWP+QGLIRHFRPELE+R+ + AE+ EA A
Sbjct: 443 LGEAFAWPIQGLIRHFRPELEKRMADFAEKTGGEALA 479
>gi|145538866|ref|XP_001455133.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422921|emb|CAK87736.1| unnamed protein product [Paramecium tetraurelia]
Length = 463
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/415 (77%), Positives = 365/415 (87%), Gaps = 1/415 (0%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
K + GGLKD+DRIFTN+Y DP+++GA+KRGDWHRTKD++ G DWI++E+KKSGLRGR
Sbjct: 18 KFYHGGLKDQDRIFTNVYRDGDPYIQGALKRGDWHRTKDILTMGQDWIIDEIKKSGLRGR 77
Query: 112 GGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
GGAGFPSGLK+SFMPKV+ DGRPSYLV+NADESEPGTCKDREI+RHDPHKL+EG L G
Sbjct: 78 GGAGFPSGLKYSFMPKVNPDGRPSYLVINADESEPGTCKDREILRHDPHKLVEGALCVGF 137
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
MRA AAYIY RGE+ E L++A EAY G LGKNACGSGYDFDV++H GAGAYICG
Sbjct: 138 AMRARAAYIYCRGEFWVEANALQQAVDEAYKKGFLGKNACGSGYDFDVYVHSGAGAYICG 197
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EET L+ESLEGK GKPRLKPPFPANAGL+GCPTTVTNVETV+V PTILRRG +WFASFGR
Sbjct: 198 EETGLIESLEGKPGKPRLKPPFPANAGLWGCPTTVTNVETVSVCPTILRRGANWFASFGR 257
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
NN GTKLFC+SGHVN PCTVEEEMSIPLKELI+RHCGGVRGGWDNL +IPGGSSVP+L
Sbjct: 258 PNNRGTKLFCISGHVNNPCTVEEEMSIPLKELIERHCGGVRGGWDNLKCIIPGGSSVPML 317
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +C+ VLMD+DAL+ V+SGLGTAAVIV+DKSTD++DAI RLS FYKHESCGQCTPCRE
Sbjct: 318 PKEVCETVLMDFDALRDVRSGLGTAAVIVIDKSTDIIDAILRLSKFYKHESCGQCTPCRE 377
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
GT WL ++ER+KVGNA EID L+E+T QIEGHTICALGDAAAWPVQGLIR +
Sbjct: 378 GTSWLVDLLERMKVGNADFAEIDQLEELTYQIEGHTICALGDAAAWPVQGLIRSY 432
>gi|145498931|ref|XP_001435452.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402584|emb|CAK68055.1| unnamed protein product [Paramecium tetraurelia]
Length = 462
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/415 (77%), Positives = 365/415 (87%), Gaps = 1/415 (0%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
K + GGLKD+DRIFTN+Y DP+++GA+KRGDWHRTKD++ G DWI++E+KKSGLRGR
Sbjct: 17 KFYHGGLKDQDRIFTNVYRDGDPYIQGALKRGDWHRTKDILTMGQDWIIDEIKKSGLRGR 76
Query: 112 GGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
GGAGFPSGLK+SFMPKV+ DGRPSYLV+NADESEPGTCKDREI+RHDPHKL+EG L G
Sbjct: 77 GGAGFPSGLKYSFMPKVNPDGRPSYLVINADESEPGTCKDREILRHDPHKLVEGALCVGF 136
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
MRA AAYIY RGE+ E L++A EAY G LGKNACGSGYDFDV++H GAGAYICG
Sbjct: 137 AMRARAAYIYCRGEFWVEANALQQAVDEAYKKGFLGKNACGSGYDFDVYVHSGAGAYICG 196
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EET L+ESLEGK GKPRLKPPFPANAGL+GCPTTVTNVETV+V PTILRRG +WFASFGR
Sbjct: 197 EETGLIESLEGKPGKPRLKPPFPANAGLWGCPTTVTNVETVSVCPTILRRGANWFASFGR 256
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
NN GTKLFC+SGHVN PCTVEEEMSIPLKELI+RHCGGVRGGWDNL +IPGGSSVP+L
Sbjct: 257 PNNRGTKLFCISGHVNNPCTVEEEMSIPLKELIERHCGGVRGGWDNLKCIIPGGSSVPML 316
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +C+ VLMD+DAL+ V+SGLGTAAVIV+DKSTD++DAI RLS FYKHESCGQCTPCRE
Sbjct: 317 PKEVCETVLMDFDALRDVRSGLGTAAVIVIDKSTDIIDAILRLSKFYKHESCGQCTPCRE 376
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
GT WL ++ER+KVGNA EID L+E+T QIEGHTICALGDAAAWPVQGLIR +
Sbjct: 377 GTSWLVDLLERMKVGNADFAEIDQLEELTYQIEGHTICALGDAAAWPVQGLIRSY 431
>gi|402819265|ref|ZP_10868834.1| hypothetical protein IMCC14465_00680 [alpha proteobacterium
IMCC14465]
gi|402511969|gb|EJW22229.1| hypothetical protein IMCC14465_00680 [alpha proteobacterium
IMCC14465]
Length = 427
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/426 (73%), Positives = 366/426 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D DRIF N+YG L A +RGDW TK L+ KG DW++ EVK SGLRGRGGAGFP
Sbjct: 2 LQDSDRIFKNIYGPDGADLASAKQRGDWDNTKGLLAKGRDWVIEEVKSSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +DGRP YLVVNADESEPGTCKDR+IMRH+PHKLLEGCL+AG M A A
Sbjct: 62 TGLKWSFMPKENDGRPHYLVVNADESEPGTCKDRDIMRHEPHKLLEGCLLAGFAMGAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L++A EAY AGLLGKNACGSG+D+D+++H+GAGAYICGEETAL+E
Sbjct: 122 YIYVRGEFIREREALQKAVDEAYDAGLLGKNACGSGWDYDIYVHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTI RRG WF+ GR+ N+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTICRRGASWFSGLGREGNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEEEM IPLKEL++ H GGVRGGWDNLLAVIPGGSSVP+LPK ICD
Sbjct: 242 LFCISGHVNKPCNVEEEMGIPLKELLETHAGGVRGGWDNLLAVIPGGSSVPMLPKEICDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+LK VQSGLGTAAVIVMDKSTD+V AIAR+++FYKHESCGQCTPCREGTGW+W
Sbjct: 302 VRMDFDSLKEVQSGLGTAAVIVMDKSTDLVKAIARIAHFYKHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ G AK +EID L +VTKQIEGHTICALGDAAAWP+QGL RHFRPE+E R+ HA
Sbjct: 362 VMERIAKGQAKPQEIDTLLQVTKQIEGHTICALGDAAAWPIQGLFRHFRPEIEARLTGHA 421
Query: 478 ERELLE 483
+E E
Sbjct: 422 SQEAAE 427
>gi|85086245|ref|XP_957659.1| NADH-quinone oxidoreductase chain F 1 [Neurospora crassa OR74A]
gi|67477366|sp|P24917.2|NDUV1_NEUCR RecName: Full=NADH-ubiquinone oxidoreductase 51 kDa subunit,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; Flags: Precursor
gi|28918753|gb|EAA28423.1| NADH-quinone oxidoreductase chain F 1 [Neurospora crassa OR74A]
gi|39979235|emb|CAE85605.1| NADH2 dehydrogenase (ubiquinone) flavoprotein 1 precursor
[Neurospora crassa]
Length = 493
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/436 (73%), Positives = 369/436 (84%), Gaps = 3/436 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H+GGLKD+DRIF NLYG + P LK A K GDWH+TK+++LKG DWI+ EVK SGLRGRGG
Sbjct: 40 HYGGLKDQDRIFQNLYGRYPPDLKHAKKMGDWHKTKEILLKGHDWIIGEVKASGLRGRGG 99
Query: 114 AGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
AGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 100 AGFPSGLKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGR 159
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A+AAYIYIRGE++ E L+ A EAYA GL+GKNACGSGYDFDV++H GAGAY+CG
Sbjct: 160 AMNATAAYIYIRGEFIQEAAILQNAINEAYADGLIGKNACGSGYDFDVYLHRGAGAYVCG 219
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVETVAV+PTI RRG +WFA FGR
Sbjct: 220 EETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGNWFAGFGR 279
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ N GTKLFC+SGHVN PCTVEEEMSIP++ELID+HCGGVRGGWDNLLAVIPGGSS P+L
Sbjct: 280 ERNQGTKLFCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWDNLLAVIPGGSSTPIL 339
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PKHICD LMD+DALK QSGLGTAA+IVMDKSTDVV AI+RLS+FY+HESCGQCTPCRE
Sbjct: 340 PKHICDTQLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRLSHFYRHESCGQCTPCRE 399
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE
Sbjct: 400 GSKWTEQIMKRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELE 459
Query: 471 RRIKEHAERELLEATA 486
RI++ A+ EA A
Sbjct: 460 ARIRKFAQENGGEALA 475
>gi|440489100|gb|ELQ68779.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Magnaporthe oryzae
P131]
Length = 1027
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/457 (70%), Positives = 374/457 (81%), Gaps = 6/457 (1%)
Query: 33 QGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLV 92
Q A + +T Q P P K +GGL+D+DRIF NLYG + P LK A K GDWH+TK+++
Sbjct: 26 QPARSFATVQDGTPAP---KRTYGGLRDQDRIFQNLYGRYPPDLKHAKKMGDWHKTKEII 82
Query: 93 LKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCK 149
LKG DWI+ E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCK
Sbjct: 83 LKGHDWIIGEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCK 142
Query: 150 DREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNA 209
DREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+ A EAYA GL+GKNA
Sbjct: 143 DREIMRKDPHKLIEGCLVAGRAMNATAAYIYIRGEFYHEAAVLQGAINEAYADGLIGKNA 202
Query: 210 CGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVE 269
CGSGYDFDV +H G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVE
Sbjct: 203 CGSGYDFDVFVHRGGGAYVCGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVANVE 262
Query: 270 TVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGG 329
T+AV+PTI RRG WFA FGR+ N GTKLFC+SG VN PCTVEEEMSIP++ELI++HCGG
Sbjct: 263 TIAVAPTICRRGGSWFAGFGRERNQGTKLFCISGQVNNPCTVEEEMSIPMRELIEKHCGG 322
Query: 330 VRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDA 389
VRGGWDNLLAVIPGGSS P+LPK+ICDD LMD+DALK QSGLGTAAVIVMDKS DVV A
Sbjct: 323 VRGGWDNLLAVIPGGSSTPILPKNICDDQLMDFDALKDSQSGLGTAAVIVMDKSADVVRA 382
Query: 390 IARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICA 449
IARLS+FY+HESCGQCTPCREG+ W IM R + G ++ EIDMLQE+TKQ+EGHTICA
Sbjct: 383 IARLSHFYRHESCGQCTPCREGSKWTEQIMHRFEHGQGRVREIDMLQELTKQVEGHTICA 442
Query: 450 LGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
LG+A AWP+QGLIRHFRPELE+R+ + AE+ EA A
Sbjct: 443 LGEAFAWPIQGLIRHFRPELEKRMADFAEKTGGEALA 479
>gi|402085446|gb|EJT80344.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 508
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/432 (73%), Positives = 368/432 (85%), Gaps = 3/432 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P K +GGL+D+DRIF NLYG + P LK A K GDWH+TK+++LKG DWI+ E+K SGLR
Sbjct: 51 PAKRTYGGLRDQDRIFQNLYGRYPPDLKSAKKMGDWHKTKEIILKGHDWIIGEIKASGLR 110
Query: 110 GRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 111 GRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCL 170
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+V+E L++A EAYA GL+GKNACGSGYDFDV+IH G GA
Sbjct: 171 VAGRAMNATAAYIYIRGEFVHEAAVLQQAINEAYADGLIGKNACGSGYDFDVYIHRGGGA 230
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVETVAV+PTI RRG WFA
Sbjct: 231 YVCGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGSWFA 290
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKLFC+SGHVN PCTVEEEMSI ++ELID+HCGGVRGGWDNLLAVIPGGSS
Sbjct: 291 GFGRERNQGTKLFCISGHVNNPCTVEEEMSISMRELIDKHCGGVRGGWDNLLAVIPGGSS 350
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P+LPK++CDD LMD+DALK QSGLGTAAVIVMDKSTDVV AIARLS+FY+HESCGQCT
Sbjct: 351 TPILPKNVCDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAIARLSHFYRHESCGQCT 410
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ W IM R + G ++ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFR
Sbjct: 411 PCREGSKWTEQIMHRFEHGQGRVREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFR 470
Query: 467 PELERRIKEHAE 478
PELE+R+ ++A+
Sbjct: 471 PELEKRMADYAQ 482
>gi|344295482|ref|XP_003419441.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Loxodonta africana]
Length = 464
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/430 (74%), Positives = 366/430 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGS YDFDV + GAGAYIC
Sbjct: 147 RSMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSEYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHV PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVRHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIKEHAER 479
E R++ A++
Sbjct: 447 EERMQRFAQQ 456
>gi|320166203|gb|EFW43102.1| mitochondrial NADH:ubiquinone oxidoreductase NDUFV1/51 kDa subunit
[Capsaspora owczarzaki ATCC 30864]
Length = 480
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/426 (76%), Positives = 369/426 (86%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G LKD DRIFTNLYG HD +KGA+ RGDW++TK+++LKG DWI+NEVKKSGLRGRGGA
Sbjct: 36 YGNLKDSDRIFTNLYGRHDWGIKGALARGDWYKTKEILLKGHDWILNEVKKSGLRGRGGA 95
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 96 GFPSGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 155
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AG LGKNACGSGYDFDV +H GAGAYICGEETA
Sbjct: 156 RAAYIYIRGEFYNEASNMQVAIHEAYKAGFLGKNACGSGYDFDVFMHRGAGAYICGEETA 215
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RR +WFASFGR+ N
Sbjct: 216 LIESLEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRTGEWFASFGRERNQ 275
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFC+SG VN P TVEEEMSIPLKELI+RH GGV GGWDNLLA+IPGG+SVPLLP+ I
Sbjct: 276 GTKLFCISGQVNTPVTVEEEMSIPLKELIERHAGGVIGGWDNLLAIIPGGASVPLLPRKI 335
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDVLMD+DAL+ V SGLGTAAVIVM+K +DV+ I+RLS FYKHESCGQCTPCREG GW
Sbjct: 336 CDDVLMDFDALRDVTSGLGTAAVIVMNKQSDVIRCISRLSDFYKHESCGQCTPCREGVGW 395
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
L IM+R GNAK EIDM++E+T+QIEGHTICALGDAAAWPVQGLIRHFRPE+E RI
Sbjct: 396 LAKIMKRFVDGNAKPAEIDMIEELTRQIEGHTICALGDAAAWPVQGLIRHFRPEIESRIA 455
Query: 475 EHAERE 480
+++
Sbjct: 456 TFQQQK 461
>gi|302895873|ref|XP_003046817.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727744|gb|EEU41104.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 486
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/458 (71%), Positives = 377/458 (82%), Gaps = 11/458 (2%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
+VGL + +G +T P K +GGL+D+DRIF NLYG + LK A + G
Sbjct: 11 AVGLSRTAVRGLATVQDGAP--------KRTYGGLRDQDRIFQNLYGRYPVDLKSAKRMG 62
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNA 140
DWH+TK+++LKG DWI+ EVK SGLRGRGGAGFPSGLKWSFM D +P YLVVNA
Sbjct: 63 DWHKTKEIILKGHDWIIGEVKASGLRGRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNA 122
Query: 141 DESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAY 200
DE EPGTCKDREIMR DPHKL+EGCLIAG M A+AAYIYIRGE+V E L+RA EAY
Sbjct: 123 DEGEPGTCKDREIMRKDPHKLVEGCLIAGRAMNATAAYIYIRGEFVEEAAVLQRAINEAY 182
Query: 201 AAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYG 260
A GL+GKNACGSGYDFDV++H GAGAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+G
Sbjct: 183 ADGLIGKNACGSGYDFDVYVHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFG 242
Query: 261 CPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLK 320
CP+TVTNVETVAV+PTI RRG +WFA FGR+ N GTKLFC+SGHVN P TVEEEMSIPL+
Sbjct: 243 CPSTVTNVETVAVAPTICRRGGNWFAGFGRERNQGTKLFCISGHVNNPVTVEEEMSIPLR 302
Query: 321 ELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVM 380
ELID+HCGGVRGGWDNLLAVIPGGSS P+LPKH+CDD LMD+DALK QSGLGTAAVIVM
Sbjct: 303 ELIDKHCGGVRGGWDNLLAVIPGGSSTPVLPKHVCDDQLMDFDALKDSQSGLGTAAVIVM 362
Query: 381 DKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTK 440
DKSTD+V AI+RLS+FY+HESCGQCTPCREG+ W IM R + G A+ EIDMLQE+TK
Sbjct: 363 DKSTDIVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMSRFEKGQAREREIDMLQELTK 422
Query: 441 QIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
Q+EGHTICALG+A AWP+QGLIRHFRPELE R+++ A+
Sbjct: 423 QVEGHTICALGEAFAWPIQGLIRHFRPELEARMQKFAQ 460
>gi|19526814|ref|NP_598427.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
precursor [Mus musculus]
gi|47117274|sp|Q91YT0.1|NDUV1_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; AltName: Full=NADH-ubiquinone
oxidoreductase 51 kDa subunit; Flags: Precursor
gi|15928709|gb|AAH14818.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Mus musculus]
gi|26344485|dbj|BAC35893.1| unnamed protein product [Mus musculus]
gi|27469887|gb|AAH41682.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Mus musculus]
gi|148701043|gb|EDL32990.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, isoform CRA_b [Mus
musculus]
Length = 464
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/430 (74%), Positives = 367/430 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA++RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGPDWILGEMKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGS YDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIKEHAER 479
E R++ A++
Sbjct: 447 EDRMQRFAQQ 456
>gi|255947866|ref|XP_002564700.1| Pc22g06720 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591717|emb|CAP97960.1| Pc22g06720 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 495
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/457 (70%), Positives = 379/457 (82%), Gaps = 7/457 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RS QGA+ S PP H+GGLKD+DRIFTNLYG H LK +MK GDW+R
Sbjct: 19 RSLRAQGAAARSFASVSEAPPV---KHYGGLKDQDRIFTNLYGHHGADLKSSMKYGDWYR 75
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESE 144
TKD++ KG DW+++E+K SGLRGRGGAGFPSGLK+SFM D RP YLVVNADE E
Sbjct: 76 TKDIISKGDDWLISEIKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGE 135
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREIMR DP KL+EGCL+ G M A+AAYIYIRGE+ +E L+RA EAY AGL
Sbjct: 136 PGTCKDREIMRKDPQKLIEGCLVVGRAMNANAAYIYIRGEFYHEATVLQRAINEAYEAGL 195
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
+GKNACGSGYDFDV+IH G GAYICGEET+L+ES+EGK GKPRLKPPFPA GL+GCP+T
Sbjct: 196 IGKNACGSGYDFDVYIHRGMGAYICGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPST 255
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
VTNVETVAV+PTI+RRG WF+SFGR+ N+GTKLFC+SGHVN P TVEEEMSI L+ELI+
Sbjct: 256 VTNVETVAVTPTIMRRGASWFSSFGRERNAGTKLFCISGHVNNPVTVEEEMSISLRELIE 315
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
+HCGGVRGGWDNLLAVIPGGSS P++PK + D+ LMD+DALK Q+GLGTAAVIVMDKST
Sbjct: 316 KHCGGVRGGWDNLLAVIPGGSSTPVIPKTVADNQLMDFDALKDSQTGLGTAAVIVMDKST 375
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+V AI+RLS FYKHESCGQCTPCREG+ W +M+RL+ GNA+ EIDMLQE+TKQ+EG
Sbjct: 376 DIVRAISRLSTFYKHESCGQCTPCREGSKWTMQMMQRLETGNAREREIDMLQELTKQVEG 435
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAEREL 481
HTICALG+A AWP+QGLIRHFRPELE RI+++ E+EL
Sbjct: 436 HTICALGEAFAWPIQGLIRHFRPELEARIRQY-EKEL 471
>gi|395544703|ref|XP_003774247.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial, partial [Sarcophilus harrisii]
Length = 438
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/429 (75%), Positives = 366/429 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 2 PKKTTFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 61
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLI G
Sbjct: 62 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIGG 121
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 122 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 181
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 182 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGSWFASFG 241
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 242 RERNSGTKLFNISGHVNYPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 301
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+D L Q+GLGTAAVIVM++STD+V AIARL FYKHESCGQCTPCR
Sbjct: 302 IPKSVCETVLMDFDGLIQAQTGLGTAAVIVMNRSTDIVKAIARLIEFYKHESCGQCTPCR 361
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A++ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 362 EGVDWMNKVMWRFVKGDARVSEIDALWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 421
Query: 470 ERRIKEHAE 478
E R+ A+
Sbjct: 422 EDRMHRFAK 430
>gi|548387|sp|P25708.2|NDUV1_BOVIN RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; AltName: Full=NADH dehydrogenase
flavoprotein 1; AltName: Full=NADH-ubiquinone
oxidoreductase 51 kDa subunit; Flags: Precursor
gi|109939909|gb|AAI18305.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [Bos taurus]
gi|296471573|tpg|DAA13688.1| TPA: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
precursor [Bos taurus]
Length = 464
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/424 (76%), Positives = 363/424 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRI 473
E R+
Sbjct: 447 EERM 450
>gi|402892620|ref|XP_003909507.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 1 [Papio anubis]
Length = 464
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/425 (75%), Positives = 365/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN+PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNQPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCEMVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|40538780|ref|NP_777233.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
precursor [Bos taurus]
gi|162864|gb|AAA30450.1| mitochondrial NADH dehydrogenase (ubiquinone) 51kDa subunit [Bos
taurus]
Length = 464
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/424 (76%), Positives = 363/424 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLCEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRI 473
E R+
Sbjct: 447 EERM 450
>gi|163412|gb|AAA30661.1| NADH dehydrogenase, partial [Bos taurus]
Length = 490
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/424 (76%), Positives = 363/424 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 53 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 112
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 113 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 172
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 173 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 232
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 233 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 292
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 293 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 352
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 353 IPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 412
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 413 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 472
Query: 470 ERRI 473
E R+
Sbjct: 473 EERM 476
>gi|432091045|gb|ELK24257.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Myotis davidii]
Length = 464
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/436 (73%), Positives = 367/436 (84%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E+K SGLRG
Sbjct: 28 KKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEIKTSGLRG 87
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 88 RGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGGR 147
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICG
Sbjct: 148 AMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICG 207
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETV+VSPTI RRG WFA FGR
Sbjct: 208 EETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVSVSPTICRRGGAWFAGFGR 267
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+
Sbjct: 268 ERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLI 327
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCRE
Sbjct: 328 PKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCRE 387
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE
Sbjct: 388 GVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE 447
Query: 471 RRIKEHAERELLEATA 486
R++ A++ + A
Sbjct: 448 DRMQRFAQQHQVRQAA 463
>gi|281353395|gb|EFB28979.1| hypothetical protein PANDA_010233 [Ailuropoda melanoleuca]
Length = 440
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/428 (75%), Positives = 364/428 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 3 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 62
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 63 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 122
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNAC SGYDFDV + GAGAYIC
Sbjct: 123 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACDSGYDFDVFVVRGAGAYIC 182
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 183 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 242
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PL+ELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 243 RERNSGTKLFNISGHVNHPCTVEEEMSVPLRELIEKHAGGVIGGWDNLLAVIPGGSSTPL 302
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 303 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 362
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 363 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 422
Query: 470 ERRIKEHA 477
E R++ A
Sbjct: 423 EERMQRFA 430
>gi|453085520|gb|EMF13563.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Mycosphaerella
populorum SO2202]
Length = 511
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/441 (73%), Positives = 372/441 (84%), Gaps = 4/441 (0%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
PP H GGLKD+DRIFTNLYG H LK AMK GDWH+TK+++ KG DWI++E+K SGL
Sbjct: 54 PPVHRH-GGLKDQDRIFTNLYGHHGADLKSAMKYGDWHKTKEILDKGHDWIISEIKASGL 112
Query: 109 RGRGGAGFPSGLKWSFM-PK--VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
RGRGGAGFPSG+KWSFM PK D +P YLVVNADE EPGTCKDREIMR DPHKL+EGC
Sbjct: 113 RGRGGAGFPSGMKWSFMNPKGWDEDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGC 172
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
L+AG M +AAYIYIRGE+ +E L+RA QEAY AG LG+NACGSGY+FDV +H G G
Sbjct: 173 LVAGRAMNCTAAYIYIRGEFYHEATVLQRAIQEAYQAGFLGENACGSGYNFDVFLHRGMG 232
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI+RRG WF
Sbjct: 233 AYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTIIRRGASWF 292
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
+SFGR+ N+GTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGVRGGWDNL AVIPGGS
Sbjct: 293 SSFGRERNAGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVRGGWDNLKAVIPGGS 352
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S P+LP+ ICDD LMD+DALK QSGLGTAAVIVMD+STDVV AI+RLS FY HESCGQC
Sbjct: 353 STPILPRKICDDQLMDFDALKDSQSGLGTAAVIVMDQSTDVVRAISRLSKFYHHESCGQC 412
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREG+ W IM+R + G A+ EIDM+QE+TKQ+EGHTICALG+A AWP+QGLIRHF
Sbjct: 413 TPCREGSKWTEQIMQRFEKGQARAREIDMMQELTKQVEGHTICALGEAFAWPIQGLIRHF 472
Query: 466 RPELERRIKEHAERELLEATA 486
RPELE RI +HA++ EA A
Sbjct: 473 RPELEARIADHAKKTGGEALA 493
>gi|402892622|ref|XP_003909508.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 2 [Papio anubis]
Length = 455
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/430 (74%), Positives = 366/430 (85%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K
Sbjct: 13 PSRTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FA FGR+ NSGTKLF +SGHVN+PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FAGFGRERNSGTKLFNISGHVNQPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCEMVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRIK 474
FRPELE R++
Sbjct: 433 FRPELEERMQ 442
>gi|260656005|ref|NP_001159574.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
isoform 2 precursor [Homo sapiens]
gi|14198176|gb|AAH08146.1| NDUFV1 protein [Homo sapiens]
gi|119595058|gb|EAW74652.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa, isoform
CRA_a [Homo sapiens]
Length = 455
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/430 (74%), Positives = 365/430 (84%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKG++ RGDW++TK+++LKG DWI+ E+K
Sbjct: 13 PARTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FA FGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRIK 474
FRPELE R++
Sbjct: 433 FRPELEERMQ 442
>gi|336466280|gb|EGO54445.1| NADH/ubiquinone oxidoreductase [Neurospora tetrasperma FGSC 2508]
gi|350286858|gb|EGZ68105.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
[Neurospora tetrasperma FGSC 2509]
Length = 493
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/489 (67%), Positives = 388/489 (79%), Gaps = 24/489 (4%)
Query: 2 APMKG-VLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKD 60
AP K +L RA++ +C R+F+T +A+ + H+GGLKD
Sbjct: 7 APTKASARTLSRAAVEQC---------RTFATVQDGSANPVR-----------HYGGLKD 46
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120
+DRIF NLYG + P LK A K GDWH+TK+++LKG DWI+ EVK SGLRGRGGAGFPSGL
Sbjct: 47 QDRIFQNLYGRYPPDLKHAKKMGDWHKTKEILLKGHDWIIGEVKASGLRGRGGAGFPSGL 106
Query: 121 KWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
KWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AA
Sbjct: 107 KWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRAMNATAA 166
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ E L+ A EAYA GL+GKNACGSGYDFDV++H GAGAY+CGEET+L+E
Sbjct: 167 YIYIRGEFIQEAAILQNAINEAYADGLIGKNACGSGYDFDVYLHRGAGAYVCGEETSLIE 226
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG WFA FGR+ N GTK
Sbjct: 227 SLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGSWFAGFGRERNQGTK 286
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PCTVEEEMSIP++ELID+HCGGVRGGWDNLLAVIPGGSS P+LPKHICD
Sbjct: 287 LFCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWDNLLAVIPGGSSTPILPKHICDS 346
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
LMD+DALK QSGLGTAA+IVMDKSTDVV AI+RLS+FY+HESCGQCTPCREG+ W
Sbjct: 347 QLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRLSHFYRHESCGQCTPCREGSKWTEQ 406
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE R+++ A
Sbjct: 407 IMKRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARMRKFA 466
Query: 478 ERELLEATA 486
+ EA A
Sbjct: 467 QENGGEALA 475
>gi|145488753|ref|XP_001430380.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397477|emb|CAK62982.1| unnamed protein product [Paramecium tetraurelia]
Length = 462
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/418 (76%), Positives = 365/418 (87%), Gaps = 1/418 (0%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
P + + GGLKD+DRIFTN+Y DP+++GA+KRGDWHRTKD++ G DWI++E+KKSGL
Sbjct: 14 PQPRYYHGGLKDQDRIFTNVYRDGDPYIQGALKRGDWHRTKDILTMGQDWIIDEIKKSGL 73
Query: 109 RGRGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLI 167
RGRGGAGFPSGLK+SFMPKV+ DGRPSYLV+NADESEPGTCKDREI+RHDPHKL+EG L
Sbjct: 74 RGRGGAGFPSGLKYSFMPKVNPDGRPSYLVINADESEPGTCKDREILRHDPHKLVEGALC 133
Query: 168 AGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAY 227
G MRA AAYIY RGE+ E L++A EAY G LGKNACGSGYDFDV++H GAGAY
Sbjct: 134 VGFAMRARAAYIYCRGEFWVEANALQQAVDEAYKKGFLGKNACGSGYDFDVYVHSGAGAY 193
Query: 228 ICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFAS 287
ICGEET L+ESLEGK GKPRLKPPFPANAGL+GCPTTVTNVETV+V PTILRRG +WFAS
Sbjct: 194 ICGEETGLIESLEGKPGKPRLKPPFPANAGLWGCPTTVTNVETVSVCPTILRRGANWFAS 253
Query: 288 FGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSV 347
FGR NN GTKLFC+SGHVN PCTVEEEMSIPLKELI+RHCGGVRGGWDNL +IPGGSSV
Sbjct: 254 FGRPNNRGTKLFCISGHVNNPCTVEEEMSIPLKELIERHCGGVRGGWDNLKCIIPGGSSV 313
Query: 348 PLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTP 407
P+LPK C+ VLMD+DAL+ V+SGLGTAAVIV+DKSTD++DAI RLS FYKHESCGQCTP
Sbjct: 314 PMLPKETCETVLMDFDALRDVRSGLGTAAVIVIDKSTDIIDAILRLSKFYKHESCGQCTP 373
Query: 408 CREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
CREGT WL ++ER+KVGNA EID L+E+T QIEGHTICALGDAAAWPVQGLIR +
Sbjct: 374 CREGTSWLVDLLERMKVGNADFAEIDQLEELTYQIEGHTICALGDAAAWPVQGLIRSY 431
>gi|20149568|ref|NP_009034.2| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
isoform 1 precursor [Homo sapiens]
gi|20455501|sp|P49821.4|NDUV1_HUMAN RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; AltName: Full=NADH dehydrogenase
flavoprotein 1; AltName: Full=NADH-ubiquinone
oxidoreductase 51 kDa subunit; Flags: Precursor
gi|3095113|gb|AAC39722.1| NADH:ubiquinone dehydrogenase 51 kDa subunit [Homo sapiens]
gi|3136152|gb|AAC39750.1| NADH:ubiquinone dehydrogenase 51 kDa subunit [Homo sapiens]
gi|5138912|gb|AAD40373.1| 51kDa subunit of NADH dehydrogenase [Homo sapiens]
gi|15990511|gb|AAH15645.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [Homo
sapiens]
gi|48145595|emb|CAG33020.1| NDUFV1 [Homo sapiens]
gi|119595061|gb|EAW74655.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa, isoform
CRA_d [Homo sapiens]
gi|119595062|gb|EAW74656.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa, isoform
CRA_d [Homo sapiens]
gi|123993121|gb|ABM84162.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [synthetic
construct]
gi|124000113|gb|ABM87565.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [synthetic
construct]
gi|307684728|dbj|BAJ20404.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [synthetic
construct]
gi|311347578|gb|ADP90734.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347580|gb|ADP90735.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347582|gb|ADP90736.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347584|gb|ADP90737.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347586|gb|ADP90738.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347588|gb|ADP90739.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347590|gb|ADP90740.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347592|gb|ADP90741.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347594|gb|ADP90742.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347596|gb|ADP90743.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347598|gb|ADP90744.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347600|gb|ADP90745.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347602|gb|ADP90746.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347604|gb|ADP90747.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347606|gb|ADP90748.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347608|gb|ADP90749.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347610|gb|ADP90750.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347612|gb|ADP90751.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347614|gb|ADP90752.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347616|gb|ADP90753.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347618|gb|ADP90754.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347620|gb|ADP90755.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347622|gb|ADP90756.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347624|gb|ADP90757.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347626|gb|ADP90758.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347628|gb|ADP90759.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347630|gb|ADP90760.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347632|gb|ADP90761.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347634|gb|ADP90762.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347636|gb|ADP90763.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347638|gb|ADP90764.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347640|gb|ADP90765.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347642|gb|ADP90766.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347644|gb|ADP90767.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347646|gb|ADP90768.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347648|gb|ADP90769.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347650|gb|ADP90770.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347652|gb|ADP90771.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347654|gb|ADP90772.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
gi|311347656|gb|ADP90773.1| mitochondrial NADH dehydrogenase ubiquinone flavoprotein 1 [Homo
sapiens]
Length = 464
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/425 (75%), Positives = 364/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKG++ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|160420036|dbj|BAF93481.1| NADH dehydrogenase flavoprotein 1 [Macaca fascicularis]
gi|355566239|gb|EHH22618.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Macaca mulatta]
gi|380786389|gb|AFE65070.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
isoform 1 precursor [Macaca mulatta]
gi|383410491|gb|AFH28459.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
isoform 1 precursor [Macaca mulatta]
gi|384940878|gb|AFI34044.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
isoform 1 precursor [Macaca mulatta]
Length = 464
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/425 (75%), Positives = 364/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|367040301|ref|XP_003650531.1| hypothetical protein THITE_2110073 [Thielavia terrestris NRRL 8126]
gi|346997792|gb|AEO64195.1| hypothetical protein THITE_2110073 [Thielavia terrestris NRRL 8126]
Length = 503
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/463 (71%), Positives = 383/463 (82%), Gaps = 15/463 (3%)
Query: 28 RSFST-QGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWH 86
RSF+T Q A TA+ P++T +GGL+D+DRIF NLYG + P LK A K GDWH
Sbjct: 34 RSFATVQDAGTAA----------PKRT-YGGLRDQDRIFQNLYGRYPPDLKHAKKMGDWH 82
Query: 87 RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADES 143
+TK+++LKG DWI+ E+K SGLRGRGGAGFPSGLKWSFM D RP YLVVNADE
Sbjct: 83 KTKEILLKGHDWIIGEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDKRPRYLVVNADEG 142
Query: 144 EPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAG 203
EPGTCKDREI+R DPHKL+EGCL+AG M A+AAYIYIRGE++ E L+ A EAYA G
Sbjct: 143 EPGTCKDREIIRKDPHKLVEGCLVAGRAMNATAAYIYIRGEFIQEAAILQNAINEAYAEG 202
Query: 204 LLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPT 263
L+GKNACGSGYDFDV++H GAGAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+
Sbjct: 203 LIGKNACGSGYDFDVYMHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPS 262
Query: 264 TVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI 323
TV NVETVAV+PTI RRG WFASFGR+ N GTKLFC+SGHVN PCTVEEEMSIP++ELI
Sbjct: 263 TVANVETVAVAPTICRRGGSWFASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPMRELI 322
Query: 324 DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS 383
++HCGGVRGGWDNLLAVIPGGSS P+LPKHICDD LMD+DALK QSGLGTAAVIVMDKS
Sbjct: 323 EKHCGGVRGGWDNLLAVIPGGSSTPILPKHICDDQLMDFDALKDSQSGLGTAAVIVMDKS 382
Query: 384 TDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE 443
TDVV AI+RLS+FY+HESCGQCTPCREG+ W IM+R + G + EIDMLQE+TKQ+E
Sbjct: 383 TDVVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMKRFEKGMGREREIDMLQELTKQVE 442
Query: 444 GHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
GHTICALG+A +WP+QGLIRHFRPELE R+++ A+ EA A
Sbjct: 443 GHTICALGEAFSWPIQGLIRHFRPELEARMQKFAQENGGEALA 485
>gi|46134221|ref|XP_389426.1| NUBM_NEUCR NADH-ubiquinone oxidoreductase 51 kDa subunit,
mitochondrial precursor (Complex I-51KD) (CI-51KD)
[Gibberella zeae PH-1]
Length = 486
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/465 (69%), Positives = 379/465 (81%), Gaps = 11/465 (2%)
Query: 25 VGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGD 84
VGL + +G +T P K +GGL+D+DRIF NLY + LK A K GD
Sbjct: 12 VGLSRTAVRGLATVQDGAP--------KRTYGGLRDQDRIFQNLYNRYPVDLKSARKMGD 63
Query: 85 WHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNAD 141
WH+TK+++LKG DWI++EVK SGLRGRGGAGFPSGLKWSFM D +P YLV+NAD
Sbjct: 64 WHKTKEIILKGHDWIISEVKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVINAD 123
Query: 142 ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYA 201
E EPGTCKDREIMR DPHKL+EGCLI+G M A+AAYIYIRGE+V E L+RA EAYA
Sbjct: 124 EGEPGTCKDREIMRKDPHKLIEGCLISGRAMNATAAYIYIRGEFVEEAAVLQRAINEAYA 183
Query: 202 AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 261
AGL+GKNAC SGYDFDV++H GAGAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GC
Sbjct: 184 AGLIGKNACESGYDFDVYLHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGC 243
Query: 262 PTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKE 321
P+TVTNVETVAV+PTI RRG WFA FGR+ N GTKLFC+SGHVN PCTVEEEMSIP++E
Sbjct: 244 PSTVTNVETVAVAPTICRRGGSWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMSIPMRE 303
Query: 322 LIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
LID+HCGGVRGGWDNLLAVIPGGSS P+LPK +CDD LMD+DALK QSGLGTAAVIVMD
Sbjct: 304 LIDKHCGGVRGGWDNLLAVIPGGSSTPVLPKSVCDDQLMDFDALKDSQSGLGTAAVIVMD 363
Query: 382 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
KSTD+V AI+RLS+FY+HESCGQCTPCREG+ W +M+R + G A+ EIDMLQE+TKQ
Sbjct: 364 KSTDIVRAISRLSHFYRHESCGQCTPCREGSKWTEQMMKRFEKGQAREREIDMLQELTKQ 423
Query: 442 IEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
+EGHTICALG+A AWP+QGLIRHFRPELE R+++ A+ EA A
Sbjct: 424 VEGHTICALGEAFAWPIQGLIRHFRPELEARMQKFAQENGGEALA 468
>gi|408390729|gb|EKJ70116.1| hypothetical protein FPSE_09642 [Fusarium pseudograminearum CS3096]
Length = 486
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/465 (69%), Positives = 379/465 (81%), Gaps = 11/465 (2%)
Query: 25 VGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGD 84
VGL + +G +T P K +GGL+D+DRIF NLY + LK A K GD
Sbjct: 12 VGLSRTAVRGLATVQDGAP--------KRTYGGLRDQDRIFQNLYNRYPVDLKSARKMGD 63
Query: 85 WHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNAD 141
WH+TK+++LKG DWI++EVK SGLRGRGGAGFPSGLKWSFM D +P YLV+NAD
Sbjct: 64 WHKTKEIILKGHDWIISEVKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVINAD 123
Query: 142 ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYA 201
E EPGTCKDREIMR DPHKL+EGCLI+G M A+AAYIYIRGE+V E L+RA EAYA
Sbjct: 124 EGEPGTCKDREIMRKDPHKLIEGCLISGRAMNATAAYIYIRGEFVEEAAVLQRAINEAYA 183
Query: 202 AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 261
AGL+GKNAC SGYDFDV++H GAGAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GC
Sbjct: 184 AGLIGKNACESGYDFDVYLHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGC 243
Query: 262 PTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKE 321
P+TVTNVETVAV+PTI RRG WFA FGR+ N GTKLFC+SGHVN PCTVEEEMSIP++E
Sbjct: 244 PSTVTNVETVAVAPTICRRGGSWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMSIPMRE 303
Query: 322 LIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
LID+HCGGVRGGWDNLLAVIPGGSS P+LPK +CDD LMD+DALK QSGLGTAAVIVMD
Sbjct: 304 LIDKHCGGVRGGWDNLLAVIPGGSSTPVLPKSVCDDQLMDFDALKDSQSGLGTAAVIVMD 363
Query: 382 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
KSTD+V AI+RLS+FY+HESCGQCTPCREG+ W +M+R + G A+ EIDMLQE+TKQ
Sbjct: 364 KSTDIVRAISRLSHFYRHESCGQCTPCREGSKWTEQMMKRFEKGQAREREIDMLQELTKQ 423
Query: 442 IEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
+EGHTICALG+A AWP+QGLIRHFRPELE R+++ A+ EA A
Sbjct: 424 VEGHTICALGEAFAWPIQGLIRHFRPELEARMQKFAQENGGEALA 468
>gi|260827659|ref|XP_002608782.1| hypothetical protein BRAFLDRAFT_273832 [Branchiostoma floridae]
gi|229294134|gb|EEN64792.1| hypothetical protein BRAFLDRAFT_273832 [Branchiostoma floridae]
Length = 475
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/457 (70%), Positives = 375/457 (82%), Gaps = 1/457 (0%)
Query: 30 FSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTK 89
S Q A+++ + + P KT +G L DEDRIFTNLYG HD LKGAM RGD+++TK
Sbjct: 20 MSKQAAASSVSIRNNSTDEAPAKT-YGPLSDEDRIFTNLYGRHDWKLKGAMARGDYYKTK 78
Query: 90 DLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCK 149
+++LKG DWI+ E+ KSGLRGRGGAGFP+G+KW FM K SDGRP YLVVNADE EPGTCK
Sbjct: 79 EIILKGHDWILKEIVKSGLRGRGGAGFPTGMKWGFMNKPSDGRPKYLVVNADEGEPGTCK 138
Query: 150 DREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNA 209
DREIMRHDPHKL+EGCL+AGV M A AAYIYIRGE+ NE NL A QEAY AGL+GKNA
Sbjct: 139 DREIMRHDPHKLVEGCLVAGVAMGARAAYIYIRGEFYNEGTNLMVAIQEAYKAGLIGKNA 198
Query: 210 CGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVE 269
CGSGYDFD+++H GAGAYICGEET+L+ESLEGK GKPRLKPPFPA+ G++GCPTTV NVE
Sbjct: 199 CGSGYDFDIYVHRGAGAYICGEETSLIESLEGKAGKPRLKPPFPADIGVFGCPTTVANVE 258
Query: 270 TVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGG 329
TVAV+PTI RRG DWF GR NSGTKLF +SG VN PCTVEEEMSIPLKELI+RH GG
Sbjct: 259 TVAVAPTICRRGGDWFVGMGRTRNSGTKLFNISGQVNNPCTVEEEMSIPLKELIERHAGG 318
Query: 330 VRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDA 389
V GGWDNLLAVIPGGSS PL+P+ +CDDV+MD+DAL Q+ LGTAAVIV +K DVV
Sbjct: 319 VIGGWDNLLAVIPGGSSTPLIPRSVCDDVMMDFDALVQSQTALGTAAVIVFNKQADVVKG 378
Query: 390 IARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICA 449
IARL FYKHESCGQCTPCREGTGW+ IM R GNA+ +EIDML E++KQIEGHTICA
Sbjct: 379 IARLIEFYKHESCGQCTPCREGTGWMTKIMYRFVEGNARPDEIDMLYELSKQIEGHTICA 438
Query: 450 LGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
LGD AAWPVQGLIRHFRPELE R++ + +++ ++A
Sbjct: 439 LGDGAAWPVQGLIRHFRPELEARMEAYHKKKQAASSA 475
>gi|119595060|gb|EAW74654.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa, isoform
CRA_c [Homo sapiens]
Length = 457
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/425 (75%), Positives = 364/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKG++ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 20 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 79
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G
Sbjct: 80 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGG 139
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 140 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 199
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 200 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 259
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 260 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 319
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 320 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 379
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 380 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 439
Query: 470 ERRIK 474
E R++
Sbjct: 440 EERMQ 444
>gi|348565125|ref|XP_003468354.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 1 [Cavia porcellus]
Length = 464
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/424 (75%), Positives = 363/424 (85%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E+K SGLRG
Sbjct: 28 KKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEIKTSGLRG 87
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 88 RGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGR 147
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICG
Sbjct: 148 SMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICG 207
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFGR
Sbjct: 208 EETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGR 267
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+
Sbjct: 268 ERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLI 327
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +C+ VLMD+DAL QSGLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCRE
Sbjct: 328 PKSVCETVLMDFDALVQAQSGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCRE 387
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE
Sbjct: 388 GVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE 447
Query: 471 RRIK 474
R++
Sbjct: 448 DRMQ 451
>gi|395851633|ref|XP_003798357.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial [Otolemur garnettii]
Length = 464
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/425 (75%), Positives = 363/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGS YDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|115502495|sp|Q0MQI4.1|NDUV1_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; AltName: Full=NADH-ubiquinone
oxidoreductase 51 kDa subunit; Flags: Precursor
gi|111661795|gb|ABH12159.1| mitochondrial complex I subunit NDUFV1 [Pongo pygmaeus]
Length = 464
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/425 (75%), Positives = 364/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNYPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDAQPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|348565127|ref|XP_003468355.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 2 [Cavia porcellus]
Length = 455
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/430 (75%), Positives = 364/430 (84%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P +KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E+K
Sbjct: 13 PARTAAKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEIK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRSMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FASFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL QSGLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCETVLMDFDALVQAQSGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRIK 474
FRPELE R++
Sbjct: 433 FRPELEDRMQ 442
>gi|397517152|ref|XP_003828783.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 2 [Pan paniscus]
Length = 455
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/430 (74%), Positives = 365/430 (84%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKG++ RGDW++TK+++LKG DWI+ E+K
Sbjct: 13 PARTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FA FGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRIK 474
FRPELE R++
Sbjct: 433 FRPELEERMQ 442
>gi|327260438|ref|XP_003215041.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Anolis carolinensis]
Length = 467
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/437 (74%), Positives = 373/437 (85%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
PP+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+NE+K SGL
Sbjct: 30 PPKKTQFGPLKDEDRIFTNLYGRHDWGLKGALSRGDWYKTKEILLKGVDWILNEIKTSGL 89
Query: 109 RGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
RGRGGAGFP+GLKWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+A
Sbjct: 90 RGRGGAGFPTGLKWSFMNKPPDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVA 149
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYI
Sbjct: 150 GRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVARGAGAYI 209
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
CGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WF F
Sbjct: 210 CGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGSWFVGF 269
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
GR+ NSGTKLF +SGHVN PCTVEEEMSIPL++LI+RH GGV+GGWDNLLAVIPGGSS P
Sbjct: 270 GRERNSGTKLFNISGHVNTPCTVEEEMSIPLRDLIERHAGGVKGGWDNLLAVIPGGSSTP 329
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
L+PK +C+ VLMD+D L Q+GLGTAAVIVMDKSTD+V AIARL FYKHESCGQCTPC
Sbjct: 330 LIPKSVCETVLMDFDGLIQAQTGLGTAAVIVMDKSTDLVRAIARLIEFYKHESCGQCTPC 389
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
REG W+ +M R GNA++ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPE
Sbjct: 390 REGVDWMNKVMWRFVKGNAQVAEIDALWEISKQIEGHTICALGDGAAWPVQGLIRHFRPE 449
Query: 469 LERRIKEHAERELLEAT 485
LE R++++ E + +A+
Sbjct: 450 LEERMRQYHESKAQQAS 466
>gi|196010577|ref|XP_002115153.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190582536|gb|EDV22609.1| conserved hypothetical protein, partial [Trichoplax adhaerens]
Length = 442
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/439 (73%), Positives = 372/439 (84%), Gaps = 11/439 (2%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
+KDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG +WI+NEVKKSGLRGRGGAGFP
Sbjct: 1 IKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGHEWILNEVKKSGLRGRGGAGFP 60
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
SGLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG M A AA
Sbjct: 61 SGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVAGRSMGARAA 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++ A EAY AGL+GKNAC SGYDFD+ +H GAGAYICGEETAL+E
Sbjct: 121 YIYIRGEFYNEASNMQIAINEAYKAGLIGKNACSSGYDFDIFMHRGAGAYICGEETALIE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+P I RRG DWFASFGR+ NSGTK
Sbjct: 181 SLEGKQGKPRLKPPFPADIGVFGCPTTVANVETVAVAPAICRRGGDWFASFGRERNSGTK 240
Query: 298 -----------LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
LFC+SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLL +IPGGSS
Sbjct: 241 ASLIIIFGYFDLFCISGHVNAPCTVEEEMSVPLKELIEKHAGGVIGGWDNLLGIIPGGSS 300
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP++P+ ICDDVLMD+DAL+ VQSGLGTAAVIVM+K +D++ I+RL FYKHESCGQCT
Sbjct: 301 VPVIPRRICDDVLMDFDALQQVQSGLGTAAVIVMNKQSDMIKCISRLMDFYKHESCGQCT 360
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGTGWL IM R GNA EEIDM++E+++QIEGHTICALGDAAAWPVQGL+RHFR
Sbjct: 361 PCREGTGWLAKIMARFVEGNADPEEIDMIEELSRQIEGHTICALGDAAAWPVQGLVRHFR 420
Query: 467 PELERRIKEHAERELLEAT 485
E+ RI+++ + +A+
Sbjct: 421 HEMLERIEQYKAKNNRQAS 439
>gi|348530005|ref|XP_003452502.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Oreochromis niloticus]
Length = 472
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/449 (72%), Positives = 375/449 (83%)
Query: 32 TQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDL 91
+QG +A T P+KT FG L D+DRIFTNLYG H+ L GA+KRGDW++TK++
Sbjct: 20 SQGGVSAITRYNSTAQSAPKKTKFGPLADQDRIFTNLYGRHEWRLNGALKRGDWYKTKEI 79
Query: 92 VLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDR 151
+LKG DWI+NE+K SGLRGRGGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDR
Sbjct: 80 LLKGVDWILNEIKVSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDR 139
Query: 152 EIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACG 211
EIMR+DPHKL+EGCLIAG M A AAYIYIRGE+ NE NL+ A EAYAAGL+GKNACG
Sbjct: 140 EIMRNDPHKLVEGCLIAGRAMGARAAYIYIRGEFYNESSNLQVAINEAYAAGLIGKNACG 199
Query: 212 SGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETV 271
SGYDFDV + GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETV
Sbjct: 200 SGYDFDVFVMRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVANVETV 259
Query: 272 AVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVR 331
AV+PTI RRG WF +FGR+ NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGVR
Sbjct: 260 AVAPTICRRGGSWFVTFGRERNSGTKLFNISGHVNHPCTVEEEMSIPLKELIERHAGGVR 319
Query: 332 GGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIA 391
GGWDNLLAVIPGGSS PL+PK +C+DVLMD+D L Q+GLGTAA+IVMDKSTD++ AIA
Sbjct: 320 GGWDNLLAVIPGGSSTPLIPKSVCEDVLMDFDGLIQAQTGLGTAALIVMDKSTDIIRAIA 379
Query: 392 RLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALG 451
RL FYKHESCGQCTPCREG W+ +M R G+A+ EIDM+ E++KQIEGH+ICALG
Sbjct: 380 RLIEFYKHESCGQCTPCREGVDWMNKMMWRFARGDARSAEIDMIWEISKQIEGHSICALG 439
Query: 452 DAAAWPVQGLIRHFRPELERRIKEHAERE 480
D AAWPVQGLIRHFRP +E RI E +++
Sbjct: 440 DGAAWPVQGLIRHFRPVMESRIAEFQQQK 468
>gi|115392085|ref|NP_001065293.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
precursor [Pan troglodytes]
gi|397517150|ref|XP_003828782.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 1 [Pan paniscus]
gi|115502494|sp|Q0MQI6.1|NDUV1_PANTR RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; AltName: Full=NADH-ubiquinone
oxidoreductase 51 kDa subunit; Flags: Precursor
gi|111661791|gb|ABH12157.1| mitochondrial complex I subunit NDUFV1 [Pan troglodytes]
gi|410258792|gb|JAA17363.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [Pan
troglodytes]
gi|410338579|gb|JAA38236.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [Pan
troglodytes]
Length = 464
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/425 (75%), Positives = 364/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKG++ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|90083182|dbj|BAE90673.1| unnamed protein product [Macaca fascicularis]
Length = 464
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/425 (75%), Positives = 363/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWP QGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPAQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|341615284|ref|ZP_08702153.1| NADH dehydrogenase I subunit F [Citromicrobium sp. JLT1363]
Length = 431
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/422 (75%), Positives = 361/422 (85%), Gaps = 1/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG LK A RGDW TK L+ KG D I+ +VK SGLRGRGGAGFP
Sbjct: 3 LADKDRIFTNLYGFQSAGLKAAQARGDWDDTKALLAKGQDAIIEDVKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREIMRHDPHKL+EG L+AG MRA A
Sbjct: 63 TGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIMRHDPHKLIEGALVAGFAMRARA 122
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L+ A EAY AGL+GKNACGSGYD+DV +H GAGAYICGEETAL+
Sbjct: 123 AYIYIRGEYIREAEALQAAIDEAYDAGLIGKNACGSGYDYDVFLHRGAGAYICGEETALI 182
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRRGP WF FGR+ NSGT
Sbjct: 183 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPAWFDGFGREKNSGT 242
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHV KPC VEEEMSIP +ELI+RHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 243 KLFQISGHVEKPCVVEEEMSIPFRELIERHCGGIRGGWDNLLAVIPGGSSVPLVPAEQIM 302
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LK + SGLGTAAVIVMDKSTD+V AI+R+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 303 DAPMDFDGLKELGSGLGTAAVIVMDKSTDIVRAISRISYFYKHESCGQCTPCREGTGWMW 362
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+RL+ G+A ++EIDML VTKQ+EGHTICALGDAAAWP+QGLIRHFRPELERRI E
Sbjct: 363 RVMKRLETGDADIDEIDMLHTVTKQVEGHTICALGDAAAWPIQGLIRHFRPELERRITER 422
Query: 477 AE 478
A+
Sbjct: 423 AD 424
>gi|426369453|ref|XP_004051704.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 2 [Gorilla gorilla gorilla]
Length = 455
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/430 (74%), Positives = 365/430 (84%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K
Sbjct: 13 PARTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
F+ FGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGW+NLLAVIPGG
Sbjct: 253 FSGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWENLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQ
Sbjct: 313 SSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ 372
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRH
Sbjct: 373 CTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRH 432
Query: 465 FRPELERRIK 474
FRPELE R++
Sbjct: 433 FRPELEERMQ 442
>gi|85708748|ref|ZP_01039814.1| NADH-ubiquinone dehydrogenase chain F 1 [Erythrobacter sp. NAP1]
gi|85690282|gb|EAQ30285.1| NADH-ubiquinone dehydrogenase chain F 1 [Erythrobacter sp. NAP1]
Length = 430
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/420 (75%), Positives = 363/420 (86%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LK A RGDW TK L+ +G D I+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNVYGFQDAGLKAAQARGDWDNTKALIERGQDAIIEEIKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG MRA A
Sbjct: 62 TGLKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLVEGALVAGFAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L++A EAY AGL+GKNA GSG+DFDV +H GAGAYICGEETA++
Sbjct: 122 AYIYIRGEYIREAQVLQKAIDEAYDAGLIGKNASGSGFDFDVFMHRGAGAYICGEETAMI 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRR +WF+SFGR+NN GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRSANWFSSFGRENNKGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHV KPC VEE MSIP +ELI++HCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVEKPCVVEEAMSIPFEELIEKHCGGIRGGWDNLLAVIPGGSSVPLVPAEQIR 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ MD+D LK + SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 NAPMDFDGLKDLGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A +EEIDML EVTKQ+EGHTICALGDAAAWP+QGLIRHFRPELERRI+EH
Sbjct: 362 RVMERLRTGDAAIEEIDMLHEVTKQVEGHTICALGDAAAWPIQGLIRHFRPELERRIEEH 421
>gi|62510804|sp|Q8HXQ9.1|NDUV1_MACFA RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; AltName: Full=NADH-ubiquinone
oxidoreductase 51 kDa subunit; Flags: Precursor
gi|23574759|dbj|BAC20599.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Macaca
fascicularis]
Length = 464
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/425 (75%), Positives = 364/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYK+ESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKYESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|380015705|ref|XP_003691837.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Apis florea]
Length = 469
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/466 (69%), Positives = 373/466 (80%), Gaps = 5/466 (1%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGG-LKDEDRIFTNLYGMH 72
++VRC+ V + G+S +S Q PE GG L D+DRIFTNLYG H
Sbjct: 4 AIVRCFQ----VPRKQLGFLGSSLSSQQQRTFADAAPEGKKRGGPLADQDRIFTNLYGRH 59
Query: 73 DPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
D LKGA+KRGDW++TK++V KGADWI+NE+K SGLRGRGGAGFPSG+KWSFM K SDGR
Sbjct: 60 DWRLKGALKRGDWYKTKEIVEKGADWIINEIKVSGLRGRGGAGFPSGMKWSFMNKPSDGR 119
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVN DE EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N+
Sbjct: 120 PKYLVVNGDEGEPGTCKDREILRHDPHKLVEGCLIAGRAMGACAAYIYIRGEFYNEASNM 179
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAY AGL+GKNACGSGYDFD+ + GAGAYICGEETAL+ES+EGKQGKPRLKPPF
Sbjct: 180 QVAIAEAYQAGLIGKNACGSGYDFDIFVQRGAGAYICGEETALIESIEGKQGKPRLKPPF 239
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GL+GCPTTVTNVETVAV+PTI RRG WFASFGR N GTKLF +SGHVN PCTVE
Sbjct: 240 PADVGLFGCPTTVTNVETVAVAPTICRRGGAWFASFGRPRNHGTKLFNISGHVNNPCTVE 299
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CD VL+D+D L VQ+
Sbjct: 300 EEMSIPLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKSVCDTVLLDFDDLVRVQTSF 359
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVM+K TD++ AIARL FYKHESCGQCTPCREG W++ IM R G A++ EI
Sbjct: 360 GTAAVIVMNKQTDIIKAIARLISFYKHESCGQCTPCREGISWMYKIMRRFVQGQAEVHEI 419
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
DML E+TKQIE HTICAL D AAWPVQGLIRHFRPE+E RI + +
Sbjct: 420 DMLWELTKQIEMHTICALADGAAWPVQGLIRHFRPEIEARIAQRKQ 465
>gi|426369451|ref|XP_004051703.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 1 [Gorilla gorilla gorilla]
gi|115502493|sp|Q0MQI5.1|NDUV1_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial; AltName: Full=Complex I-51kD;
Short=CI-51kD; AltName: Full=NADH-ubiquinone
oxidoreductase 51 kDa subunit; Flags: Precursor
gi|111661793|gb|ABH12158.1| mitochondrial complex I subunit NDUFV1 [Gorilla gorilla]
Length = 464
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/425 (75%), Positives = 364/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WF+ FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFSGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGW+NLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWENLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|354495710|ref|XP_003509972.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial [Cricetulus griseus]
gi|344256264|gb|EGW12368.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Cricetulus griseus]
Length = 464
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/430 (74%), Positives = 364/430 (84%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEIKASGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGS YDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGSWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVIGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P+ +C+ VLMD+DAL Q+GLGTAAVIVMD STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPRSVCETVLMDFDALVQAQTGLGTAAVIVMDCSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRP L
Sbjct: 387 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPVL 446
Query: 470 ERRIKEHAER 479
E R+++ AE+
Sbjct: 447 EERMQQFAEQ 456
>gi|357613906|gb|EHJ68778.1| NADH dehydrogenase flavoprotein 1 ubiquinone [Danaus plexippus]
Length = 473
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/426 (76%), Positives = 365/426 (85%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
KT FG L D DRIFTNLYG HD L+GA++RGDW++TK+++LKG DWIVNE+K SGLRGR
Sbjct: 36 KTSFGPLADSDRIFTNLYGRHDWRLRGALQRGDWYKTKEIILKGTDWIVNELKTSGLRGR 95
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG
Sbjct: 96 GGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGAA 155
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGE+ NE NL+ A EAY AGL+GKNACGSGY+FDV +H GAGAYICGE
Sbjct: 156 MGAQAAYIYIRGEFYNEASNLQVAIAEAYQAGLIGKNACGSGYNFDVFVHRGAGAYICGE 215
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTV NVET+AVSPTI RRG WFASFGR
Sbjct: 216 ETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVNNVETIAVSPTICRRGGSWFASFGRA 275
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGV GGWDNLLA+IPGGSS PL+P
Sbjct: 276 RNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGVCGGWDNLLAIIPGGSSTPLIP 335
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +C+ +MD+D L AVQ+ LGTAA+IVMDKSTD+V AIARL FYKHESCGQCTPCREG
Sbjct: 336 KDVCETAIMDFDGLVAVQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREG 395
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
W+ I+ R GNA +EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPELER
Sbjct: 396 VSWMNKIIYRFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELER 455
Query: 472 RIKEHA 477
R+ +A
Sbjct: 456 RMAVYA 461
>gi|322698851|gb|EFY90618.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Metarhizium acridum
CQMa 102]
Length = 486
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/458 (70%), Positives = 372/458 (81%), Gaps = 11/458 (2%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
+V L + +G +T P K +GGLKD+DRIF NLYG P LK A K G
Sbjct: 11 AVSLSRNAVRGLATVQDGTP--------KRTYGGLKDQDRIFQNLYGRLPPNLKSAKKMG 62
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNA 140
DWH+TK+++LKG DWI+NE+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNA
Sbjct: 63 DWHKTKEIILKGHDWIINEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNA 122
Query: 141 DESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAY 200
DE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+V E L+ A EAY
Sbjct: 123 DEGEPGTCKDREIMRKDPHKLVEGCLVAGRAMNATAAYIYIRGEFVYEAAVLQNAINEAY 182
Query: 201 AAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYG 260
GL+GKNACGSGYDFDV IH GAGAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+G
Sbjct: 183 KDGLIGKNACGSGYDFDVFIHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFG 242
Query: 261 CPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLK 320
CP+TV NVETVAV+PTI RRG WFA FGR+ N GTKL+C+SGHVN PCTVEEEMSIPL+
Sbjct: 243 CPSTVANVETVAVAPTICRRGGSWFAGFGRERNQGTKLYCISGHVNNPCTVEEEMSIPLR 302
Query: 321 ELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVM 380
ELID+HCGGVRGGWDNLLAVIPGGSS P+LPK+ICDD LMD+DALK QSGLGTAAVIVM
Sbjct: 303 ELIDKHCGGVRGGWDNLLAVIPGGSSTPILPKNICDDQLMDFDALKDSQSGLGTAAVIVM 362
Query: 381 DKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTK 440
DKSTDVV AI+RLS+FY+HESCGQCTPCREG+ W IM R + G + EIDMLQE+TK
Sbjct: 363 DKSTDVVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMSRFERGQGREREIDMLQELTK 422
Query: 441 QIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
Q+EGHTICALG+A AWP+QGLIRHFRPELE R+++ A+
Sbjct: 423 QVEGHTICALGEAFAWPIQGLIRHFRPELEARMQKFAQ 460
>gi|169606386|ref|XP_001796613.1| hypothetical protein SNOG_06231 [Phaeosphaeria nodorum SN15]
gi|111064942|gb|EAT86062.1| hypothetical protein SNOG_06231 [Phaeosphaeria nodorum SN15]
Length = 502
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/464 (70%), Positives = 375/464 (80%), Gaps = 10/464 (2%)
Query: 20 SERLSVGLRSFS-TQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKG 78
+ RLSV + S TQ + A+ PP K +GGLKD+DRIF NLYG H LK
Sbjct: 20 AARLSVAATTPSRTQKRNLATVNDAPP------KRVYGGLKDQDRIFQNLYGHHGADLKS 73
Query: 79 AMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSY 135
AMK GDWH+TK+++LKG DWI++E+K SGLRGRGGAGFPSGLKWSFM D +P Y
Sbjct: 74 AMKYGDWHKTKEILLKGHDWIISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDTKPRY 133
Query: 136 LVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERA 195
LVVNADE EPGTCKDREIMR DPHKL+EGCL++G M A+AAYIYIRGE+ +E LERA
Sbjct: 134 LVVNADEGEPGTCKDREIMRKDPHKLIEGCLVSGRAMNATAAYIYIRGEFYHEAAVLERA 193
Query: 196 RQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPAN 255
QEAY AG +GKNACGSGYDFDV++H G GAY+CGEET+L+ESLEGK GKPRLKPPFPA
Sbjct: 194 IQEAYKAGFIGKNACGSGYDFDVYVHRGMGAYVCGEETSLIESLEGKPGKPRLKPPFPAA 253
Query: 256 AGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEM 315
GL+GCP+TV NVET+AV+PTI RRG WFA FGR+ N GTKLF +SGHVN PCTVEEEM
Sbjct: 254 VGLFGCPSTVANVETIAVAPTICRRGGSWFAGFGRERNQGTKLFAISGHVNHPCTVEEEM 313
Query: 316 SIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTA 375
SIPL+ELID+HCGGV GGWDNL AVIPGGSS P+LPKH+CDD LMD+DALK QSG GTA
Sbjct: 314 SIPLRELIDKHCGGVIGGWDNLKAVIPGGSSTPILPKHVCDDQLMDFDALKDSQSGFGTA 373
Query: 376 AVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDML 435
AVIVMDKSTDVV AI RL+ FY HESCGQCTPCREG+ W IM+R G A+ EIDML
Sbjct: 374 AVIVMDKSTDVVRAITRLAKFYHHESCGQCTPCREGSKWTHQIMDRFNKGQAREREIDML 433
Query: 436 QEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
QE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RI+ +AE+
Sbjct: 434 QELTKQVEGHTICALGEAFAWPLQGLIRHFRPELEARIQGYAEK 477
>gi|391343472|ref|XP_003746033.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Metaseiulus occidentalis]
Length = 466
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/465 (72%), Positives = 382/465 (82%), Gaps = 7/465 (1%)
Query: 15 LVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDP 74
L RC + L V LR+FS+ A+ TP P KT FG LKDEDRIF NLYG HD
Sbjct: 3 LPRC-NGALRVSLRTFSSSAATPPGTPPPQ------TKTKFGPLKDEDRIFQNLYGRHDW 55
Query: 75 FLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPS 134
LKGAM RGDW++TK++V KG++WI+NEVK SGLRGRGGAGFPSGLKWSFM K SDGRP
Sbjct: 56 RLKGAMSRGDWYKTKEIVEKGSEWIINEVKTSGLRGRGGAGFPSGLKWSFMNKPSDGRPK 115
Query: 135 YLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLER 194
YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG M A AAYIYIRGE+ NE NL+
Sbjct: 116 YLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGRAMGARAAYIYIRGEFYNEASNLQI 175
Query: 195 ARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPA 254
A +EAY AG LGKNAC SGYDFDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA
Sbjct: 176 AVKEAYQAGFLGKNACNSGYDFDVYVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPA 235
Query: 255 NAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEE 314
+ G++GCPTTVTNVETVAV+PTI RRG WFASFGR NSGTKLF +SGHVN PCTVEEE
Sbjct: 236 DVGVFGCPTTVTNVETVAVAPTICRRGGAWFASFGRTRNSGTKLFNISGHVNSPCTVEEE 295
Query: 315 MSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGT 374
MSIPLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CD VLMD+DAL Q+GLGT
Sbjct: 296 MSIPLKELIERHSGGVIGGWDNLLCVIPGGSSTPVIPKSVCDTVLMDFDALVEAQTGLGT 355
Query: 375 AAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDM 434
AA+IVM+K TD++ AI RL FYKHESCGQCTPCREG GW+ IMER G+A++EEIDM
Sbjct: 356 AAIIVMNKQTDIIRAIHRLIEFYKHESCGQCTPCREGVGWMNKIMERFVRGDARVEEIDM 415
Query: 435 LQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
+ E++KQIEGH+ICALGD AAWPVQGLIRHFRP +E RI + R
Sbjct: 416 IYEISKQIEGHSICALGDGAAWPVQGLIRHFRPIVESRIADFQAR 460
>gi|410227778|gb|JAA11108.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [Pan
troglodytes]
Length = 464
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/425 (75%), Positives = 364/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKG++ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDF+V + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFNVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|383864659|ref|XP_003707795.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Megachile rotundata]
Length = 469
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/466 (69%), Positives = 372/466 (79%), Gaps = 5/466 (1%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGG-LKDEDRIFTNLYGMH 72
++VRC+ V R GA +S PQ PE GG L D+DRIFTNLYG H
Sbjct: 4 AIVRCFQ----VPRRQLGLLGAGLSSQPQRTFADAAPEGKKKGGPLADQDRIFTNLYGRH 59
Query: 73 DPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
D LKGA+ RGDW++TK+++ KGADWI+NE+K SGLRGRGGAGFPSG+KWSFM K SDGR
Sbjct: 60 DWRLKGALSRGDWYKTKEIIEKGADWIINEIKVSGLRGRGGAGFPSGMKWSFMNKPSDGR 119
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVN DE EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N+
Sbjct: 120 PKYLVVNGDEGEPGTCKDREILRHDPHKLVEGCLIAGRAMGACAAYIYIRGEFYNEASNM 179
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAY AGL+GKNACGSGYDFD+ + GAGAYICGEETAL+ES+EGKQGKPRLKPPF
Sbjct: 180 QVAIAEAYQAGLIGKNACGSGYDFDIFVQRGAGAYICGEETALIESIEGKQGKPRLKPPF 239
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GL+GCPTTVTNVETVAV+PTI RRG WFASFGR N GTKLF +SGHVN PCTVE
Sbjct: 240 PADVGLFGCPTTVTNVETVAVAPTICRRGGSWFASFGRPRNHGTKLFNISGHVNNPCTVE 299
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CD VL+D+D L VQS
Sbjct: 300 EEMSIPLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKSVCDTVLLDFDDLVRVQSSF 359
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVM+K TD++ AI RL FYKHESCGQCTPCREG W++ IM+R G A+ EI
Sbjct: 360 GTAAVIVMNKQTDIIKAITRLISFYKHESCGQCTPCREGISWMFKIMKRFVEGKAEEHEI 419
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
DML E+TKQIE HTICAL D AAWPVQGLIRHFRPE+E RI++ +
Sbjct: 420 DMLWELTKQIELHTICALADGAAWPVQGLIRHFRPEIEERIRQRKQ 465
>gi|396498449|ref|XP_003845235.1| similar to NADH-ubiquinone oxidoreductase 51 kDa subunit
[Leptosphaeria maculans JN3]
gi|312221816|emb|CBY01756.1| similar to NADH-ubiquinone oxidoreductase 51 kDa subunit
[Leptosphaeria maculans JN3]
Length = 508
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/425 (75%), Positives = 361/425 (84%), Gaps = 3/425 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG H LK AMK GDWH+TK+++LKG DWI++E+K SGLRGRGGA
Sbjct: 56 YGGLKDQDRIFQNLYGHHGADLKSAMKYGDWHKTKEILLKGHDWIISEIKTSGLRGRGGA 115
Query: 115 GFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 116 GFPSGLKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVAGRA 175
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ +E LERA QEAY AGL+GKNACGSGYDFDV++H G GAY+CGE
Sbjct: 176 MNATAAYIYIRGEFYHEAAVLERAIQEAYQAGLIGKNACGSGYDFDVYLHRGMGAYVCGE 235
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVETVAV+PTI RRG WFASFGR+
Sbjct: 236 ETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGSWFASFGRE 295
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKL+ +SGHVNKPC VEEEMSIPL+ELID+HCGGVRGGWDNL AVIPGGSS P+LP
Sbjct: 296 RNQGTKLYAISGHVNKPCVVEEEMSIPLRELIDKHCGGVRGGWDNLKAVIPGGSSTPILP 355
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
KHICDD LMD+DALK QSG GTAAVIVMDKSTDVV AI RL+ FY HESCGQCTPCREG
Sbjct: 356 KHICDDQLMDFDALKDSQSGFGTAAVIVMDKSTDVVRAITRLAKFYHHESCGQCTPCREG 415
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
+ W IM+R G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE
Sbjct: 416 SKWTHQIMDRFYKGQAREREIDMLQELTKQVEGHTICALGEAFAWPLQGLIRHFRPELEA 475
Query: 472 RIKEH 476
RIK++
Sbjct: 476 RIKDY 480
>gi|48097536|ref|XP_391916.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial [Apis mellifera]
Length = 469
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/466 (69%), Positives = 372/466 (79%), Gaps = 5/466 (1%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGG-LKDEDRIFTNLYGMH 72
++VRC+ V + G+ S Q PE GG L D+DRIFTNLYG H
Sbjct: 4 AIVRCFQ----VPRKQLGFLGSLLNSQQQRTFADAAPEGKKRGGPLADQDRIFTNLYGRH 59
Query: 73 DPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
D LKGA+KRGDW++TK++V KGADWI+NE+K SGLRGRGGAGFPSG+KWSFM K SDGR
Sbjct: 60 DWRLKGALKRGDWYKTKEIVEKGADWIINEIKVSGLRGRGGAGFPSGMKWSFMNKPSDGR 119
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVN DE EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N+
Sbjct: 120 PKYLVVNGDEGEPGTCKDREILRHDPHKLVEGCLIAGRAMGACAAYIYIRGEFYNEASNM 179
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAY AGL+GKNACGSGYDFD+ + GAGAYICGEETAL+ES+EGKQGKPRLKPPF
Sbjct: 180 QVAIAEAYQAGLIGKNACGSGYDFDIFVQRGAGAYICGEETALIESIEGKQGKPRLKPPF 239
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GL+GCPTTVTNVETVAV+PTI RRG WFASFGR N GTKLF +SGHVN PCTVE
Sbjct: 240 PADVGLFGCPTTVTNVETVAVAPTICRRGGAWFASFGRPRNHGTKLFNISGHVNNPCTVE 299
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CD VL+D+D L VQ+
Sbjct: 300 EEMSIPLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKSVCDTVLLDFDDLVRVQTSF 359
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVM+K TD++ AIARL FYKHESCGQCTPCREG W++ IM R G A++ EI
Sbjct: 360 GTAAVIVMNKQTDIIKAIARLISFYKHESCGQCTPCREGISWMYKIMRRFVQGQAEVHEI 419
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
DML E+TKQIE HTICAL D AAWPVQGLIRHFRPE+E RI +H +
Sbjct: 420 DMLWELTKQIEMHTICALADGAAWPVQGLIRHFRPEIEARIAQHKQ 465
>gi|288958984|ref|YP_003449325.1| NADH dehydrogenase I subunit F [Azospirillum sp. B510]
gi|288911292|dbj|BAI72781.1| NADH dehydrogenase I chain F [Azospirillum sp. B510]
Length = 429
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/427 (73%), Positives = 361/427 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTNLYG D L GA KRGDW T ++ G +WI+ +VK+SGLRGRGGAGF
Sbjct: 2 LRDEDRIFTNLYGFQDFGLDGARKRGDWDNTASILANGREWIIEQVKQSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +P YLV+NADE EPGTCKDR+I+RHDPHKL+EGCLIAG + ASA
Sbjct: 62 TGMKWSFMPKNVTDKPVYLVINADEGEPGTCKDRDILRHDPHKLIEGCLIAGFAIGASAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAYAAGL+GKNACG+GYD+DV+IH GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEFYNEGSNVQRAIDEAYAAGLIGKNACGTGYDYDVYIHRGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PR KPPFPA AGLY CPTTV NVE++AV PTILRRG WFA GR NSGTK
Sbjct: 182 SIEGKKGQPRNKPPFPAQAGLYSCPTTVNNVESIAVVPTILRRGASWFAGLGRPKNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PC VEEEM IPLKELI++H GGVRGGWDNLL +IPGGSSVP+LPK ICD
Sbjct: 242 LFCISGHVNNPCNVEEEMGIPLKELIEKHAGGVRGGWDNLLGIIPGGSSVPVLPKSICDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+ VQSGLGTAAVIVMDKSTD+V AIARLS FY HESCGQCTPCREGTGW+
Sbjct: 302 VLMDFDSLREVQSGLGTAAVIVMDKSTDIVKAIARLSSFYAHESCGQCTPCREGTGWMSR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M+R+ GNA+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGL RHFRPE+ERRI+ +
Sbjct: 362 VMQRMVTGNARLEEIDMLLQVTKQVEGHTICALGDAAAWPIQGLFRHFRPEVERRIQAYR 421
Query: 478 ERELLEA 484
L A
Sbjct: 422 NSAPLAA 428
>gi|62897683|dbj|BAD96781.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa variant [Homo
sapiens]
Length = 464
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/425 (75%), Positives = 363/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKG++ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AG +GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGPIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|3032|emb|CAA39676.1| 51 kD subunit of NADH dehydrogenase (ubiquinone) [Neurospora
crassa]
Length = 493
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/436 (73%), Positives = 366/436 (83%), Gaps = 3/436 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H+GGLKD+DRIF NLYG + P LK A K GDWH+TK+++LKG DWI+ EVK SGLRGRGG
Sbjct: 40 HYGGLKDQDRIFQNLYGRYPPDLKHAKKMGDWHKTKEILLKGHDWIIGEVKASGLRGRGG 99
Query: 114 AGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
AGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 100 AGFPSGLKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGR 159
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A+AAYIYIRGE++ E L+ A EAYA GL+GKNACGSGYDFDV++H GAGAY+CG
Sbjct: 160 AMNATAAYIYIRGEFIQEAAILQNAINEAYADGLIGKNACGSGYDFDVYLHRGAGAYVCG 219
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET V+PTI RRG +WFA FGR
Sbjct: 220 EETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETAVVAPTICRRGGNWFAGFGR 279
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ N GTKLFC+SGHVN PCTVEEEMSIP++ELID+HCGGVRGGWDNLLAVIPGGSS P+L
Sbjct: 280 ERNQGTKLFCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWDNLLAVIPGGSSTPIL 339
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PKHICD LMD+DALK QSGLGTAA+IVMDKSTDVV AI+RLS+FY+HESCGQCTPCRE
Sbjct: 340 PKHICDTQLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRLSHFYRHESCGQCTPCRE 399
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+ AWP+QGLIRHFRPELE
Sbjct: 400 GSKWTEQIMKRFEKGQGREREIDMLQELTKQVEGHTICALGERFAWPIQGLIRHFRPELE 459
Query: 471 RRIKEHAERELLEATA 486
RI++ A+ EA A
Sbjct: 460 ARIRKFAQENGGEALA 475
>gi|340720621|ref|XP_003398732.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Bombus terrestris]
Length = 469
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/466 (69%), Positives = 372/466 (79%), Gaps = 5/466 (1%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGG-LKDEDRIFTNLYGMH 72
++VRC+ + R G+ +S Q PE GG L D+DRIFTNLYG H
Sbjct: 4 TIVRCFQ----LPRRQLGFLGSPLSSQQQRTFADAAPEGKKKGGPLADQDRIFTNLYGRH 59
Query: 73 DPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
D L+GA+KRGDW++TK+++ KGADWI+NE+K SGLRGRGGAGFPSG+KWSFM K SDGR
Sbjct: 60 DWRLQGALKRGDWYKTKEIIEKGADWIINEIKVSGLRGRGGAGFPSGMKWSFMNKPSDGR 119
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVN DE EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N+
Sbjct: 120 PKYLVVNGDEGEPGTCKDREILRHDPHKLVEGCLIAGRAMGACAAYIYIRGEFYNEASNM 179
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAY AGL+GKNACGSGYDFD+ + GAGAYICGEETAL+ES+EGKQGKPRLKPPF
Sbjct: 180 QVAIAEAYQAGLIGKNACGSGYDFDIFVQRGAGAYICGEETALIESIEGKQGKPRLKPPF 239
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GL+GCPTTVTNVETVAV+PTI RRG WFASFGR N GTKLF +SGHVN PCTVE
Sbjct: 240 PADVGLFGCPTTVTNVETVAVAPTICRRGGAWFASFGRPRNHGTKLFNISGHVNNPCTVE 299
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CD VL+D+D L VQS
Sbjct: 300 EEMSIPLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKSVCDTVLLDFDDLVRVQSSF 359
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVM+K TD++ AI RL FYKHESCGQCTPCREG W++ IM R G A++ EI
Sbjct: 360 GTAAVIVMNKQTDIIKAITRLISFYKHESCGQCTPCREGISWMYKIMRRFAQGQAEIHEI 419
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
DML E+TKQIE HTICAL D AAWPVQGLIRHFRPE+E RIKE +
Sbjct: 420 DMLWELTKQIEMHTICALADGAAWPVQGLIRHFRPEIEARIKERKQ 465
>gi|426191725|gb|EKV41666.1| NdufV1 ubiquinone oxidoreductase NADH-binding subunit [Agaricus
bisporus var. bisporus H97]
Length = 509
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/429 (73%), Positives = 361/429 (84%), Gaps = 3/429 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P +GGLKD+DRIFTN+Y HD +KGAM RGDWH+TK+++LKG WI+ +K SGLR
Sbjct: 42 PPVRRYGGLKDQDRIFTNVYCKHDHGIKGAMSRGDWHKTKEILLKGDSWIIQSIKDSGLR 101
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 102 GRGGAGFPSGLKWSFMNKPNWQQDPRPRYLVVNADEGEPGTCKDREILRGDPHKLVEGCL 161
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG GM ASAAYIY+RGE+ E +L++A EAYAAG LGKNACGSGYDFDV++H GAGA
Sbjct: 162 VAGRGMNASAAYIYVRGEFYQEASHLQQAIDEAYAAGFLGKNACGSGYDFDVYVHRGAGA 221
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFA
Sbjct: 222 YICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGGSWFA 281
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ N GTKLFC+SGHVN PC +EEEMSIPLK+LID+HCGGV GGWDNLL +IPGG S
Sbjct: 282 SFGRERNQGTKLFCISGHVNNPCVIEEEMSIPLKDLIDKHCGGVVGGWDNLLGIIPGGCS 341
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP+LPK C +VLMD+D+LK QSGLGT AVIVM+KSTD+V AIAR S FY+HESCGQCT
Sbjct: 342 VPVLPKDTCAEVLMDFDSLKDAQSGLGTGAVIVMNKSTDIVSAIARFSQFYQHESCGQCT 401
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT W+ +M+RL G EIDML E+TKQIEG TICALGDAAAWP+QGL+RHFR
Sbjct: 402 PCREGTTWMSKVMKRLVEGRGHQREIDMLLEITKQIEGRTICALGDAAAWPIQGLMRHFR 461
Query: 467 PELERRIKE 475
PE+ERRI E
Sbjct: 462 PEVERRIAE 470
>gi|351709807|gb|EHB12726.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Heterocephalus glaber]
Length = 465
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/424 (75%), Positives = 362/424 (85%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E+K SGLRG
Sbjct: 29 KKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEIKTSGLRG 88
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCLI G
Sbjct: 89 RGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEGCLIGGR 148
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICG
Sbjct: 149 AMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICG 208
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFGR
Sbjct: 209 EETALIESMEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFASFGR 268
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+
Sbjct: 269 ERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLI 328
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCRE
Sbjct: 329 PKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCRE 388
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
G W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFR ELE
Sbjct: 389 GVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRVELE 448
Query: 471 RRIK 474
R++
Sbjct: 449 DRMQ 452
>gi|407974322|ref|ZP_11155231.1| NADH dehydrogenase I subunit F [Nitratireductor indicus C115]
gi|407430011|gb|EKF42686.1| NADH dehydrogenase I subunit F [Nitratireductor indicus C115]
Length = 434
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/433 (74%), Positives = 365/433 (84%), Gaps = 6/433 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGQFDRSLKGAMARGHWDNTKGLIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADESEPGTCKDR+IMRHDPH L+EGCLIAG M A AA
Sbjct: 62 TGLKWSFMPKEPGERPHYLVVNADESEPGTCKDRDIMRHDPHTLVEGCLIAGFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+RA E Y AGLLGKN G+D DV +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQRAIDECYDAGLLGKNN-KCGWDMDVFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AVSPTILRRG WF+SFGR+NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVSPTILRRGASWFSSFGRENNKGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHV PCTVEEEMSIP +ELI+RHCGG+RGGWDNLLAVIPGGSSVPL+P D
Sbjct: 241 LFCISGHVENPCTVEEEMSIPFRELIERHCGGIRGGWDNLLAVIPGGSSVPLVPAAEIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D+L+A++SGLGTAAVIVMDKSTD+V AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 TPMDFDSLRALRSGLGTAAVIVMDKSTDIVKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE-- 475
+MERL VG A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGL+RHFRPE+ERRI E
Sbjct: 361 VMERLVVGQAQKHEIDMLLDVTKQVEGHTICALGDAAAWPIQGLVRHFRPEIERRIDEFT 420
Query: 476 ---HAERELLEAT 485
H R +L A
Sbjct: 421 RNAHQARPVLVAA 433
>gi|452985219|gb|EME84976.1| hypothetical protein MYCFIDRAFT_59995 [Pseudocercospora fijiensis
CIRAD86]
Length = 511
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/441 (72%), Positives = 367/441 (83%), Gaps = 4/441 (0%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
PP H GGLKD+DRIFTNLYG H LK AMK GDW++TK+++ KG DW+++E+K SGL
Sbjct: 54 PPVHRH-GGLKDQDRIFTNLYGHHGADLKSAMKYGDWYKTKEILDKGHDWLISEIKASGL 112
Query: 109 RGRGGAGFPSGLKWSFMPKV---SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
RGRGGAGFPSG+KWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGC
Sbjct: 113 RGRGGAGFPSGMKWSFMNFKGWDEDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGC 172
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
L+AG M +AAYIYIRGE+ +E L+RA QEAY AG LGKNACGSGYDFDV +H G G
Sbjct: 173 LVAGRAMNTTAAYIYIRGEFYHEATVLQRAIQEAYQAGFLGKNACGSGYDFDVFLHRGMG 232
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI+RRG WF
Sbjct: 233 AYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTIIRRGGAWF 292
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
+FGR+ NSGTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGVRGGWDNL AVIPGGS
Sbjct: 293 NAFGRERNSGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVRGGWDNLKAVIPGGS 352
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S P+LPK ICDD LMD+DALK QSGLGTAAVIVMD+STDVV AIARLS FY HESCGQC
Sbjct: 353 STPILPKKICDDQLMDFDALKDSQSGLGTAAVIVMDQSTDVVRAIARLSKFYHHESCGQC 412
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREG+ W IM R + G A+ EIDM+QE+TKQ+EGHTICALG+A AWP+QGLIRHF
Sbjct: 413 TPCREGSKWTEQIMNRFEKGQARAREIDMMQELTKQVEGHTICALGEAFAWPIQGLIRHF 472
Query: 466 RPELERRIKEHAERELLEATA 486
RPELE RI ++A + EA A
Sbjct: 473 RPELEARIADNARKSGGEALA 493
>gi|409075108|gb|EKM75492.1| NADH-binding subunit of NdufV1, NADH ubiquinone oxidoreductase
[Agaricus bisporus var. burnettii JB137-S8]
Length = 509
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/429 (73%), Positives = 361/429 (84%), Gaps = 3/429 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P +GGLKD+DRIFTN+Y HD +KGAM RGDWH+TK+++LKG WI+ +K SGLR
Sbjct: 42 PPVRRYGGLKDQDRIFTNVYCKHDHGIKGAMSRGDWHKTKEILLKGDSWIIQSIKDSGLR 101
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 102 GRGGAGFPSGLKWSFMNKPNWQQDPRPRYLVVNADEGEPGTCKDREILRGDPHKLVEGCL 161
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG GM ASAAYIY+RGE+ E +L++A EAYAAG LGKNACGSGYDFDV++H GAGA
Sbjct: 162 VAGRGMNASAAYIYVRGEFYQEASHLQQAIDEAYAAGFLGKNACGSGYDFDVYVHRGAGA 221
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFA
Sbjct: 222 YICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGGSWFA 281
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ N GTKLFC+SGHVN PC +EEEMSIPLK+LID+HCGGV GGWDNLL +IPGG S
Sbjct: 282 SFGRERNQGTKLFCISGHVNNPCVIEEEMSIPLKDLIDKHCGGVVGGWDNLLGIIPGGCS 341
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP+LPK C +VLMD+D+LK QSGLGT AVIVM+KSTD+V AIAR S FY+HESCGQCT
Sbjct: 342 VPVLPKDTCAEVLMDFDSLKDAQSGLGTGAVIVMNKSTDIVSAIARFSQFYQHESCGQCT 401
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT W+ +M+RL G EIDML E+TKQIEG TICALGDAAAWP+QGL+RHFR
Sbjct: 402 PCREGTTWMSKVMKRLVEGRGHQREIDMLLEITKQIEGRTICALGDAAAWPIQGLMRHFR 461
Query: 467 PELERRIKE 475
PE+ERRI E
Sbjct: 462 PEVERRIAE 470
>gi|156396709|ref|XP_001637535.1| predicted protein [Nematostella vectensis]
gi|156224648|gb|EDO45472.1| predicted protein [Nematostella vectensis]
Length = 477
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/476 (67%), Positives = 382/476 (80%), Gaps = 10/476 (2%)
Query: 5 KGVLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRI 64
K +L LQ + L+ + + + R+ S + ++ ST P + FG LKDEDRI
Sbjct: 3 KRLLKLQPSRLL---TGPVPLACRAVSCKRLNSTSTASEP-------QRTFGNLKDEDRI 52
Query: 65 FTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSF 124
FTNLYG HD LKGA+ RGDW++TK+++LKG +WI+ E+ SGLRGRGGAGFP+G+KW F
Sbjct: 53 FTNLYGRHDWKLKGAISRGDWYKTKEIILKGPEWILKEITTSGLRGRGGAGFPTGMKWGF 112
Query: 125 MPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGE 184
M K SDGRP YLVVNADE EPGTCKDREIMR+DPHKL+EGCL+AG M A AAYIYIRGE
Sbjct: 113 MNKPSDGRPKYLVVNADEGEPGTCKDREIMRNDPHKLIEGCLVAGASMGARAAYIYIRGE 172
Query: 185 YVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQG 244
+ NE N++ A EAY GL+GKNACGSG+DFDV++H GAGAYICGEETAL+ESLEGKQG
Sbjct: 173 FYNEASNMQVAINEAYKKGLIGKNACGSGFDFDVYMHRGAGAYICGEETALIESLEGKQG 232
Query: 245 KPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGH 304
KPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG +WF+ FGR N+GTKLF +SGH
Sbjct: 233 KPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGEWFSGFGRPRNTGTKLFNISGH 292
Query: 305 VNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDA 364
VN PCTVEEEMS+PLK+LI+RH GGV GGWDNLL VIPGGSS PL+P +CDDVLMD+DA
Sbjct: 293 VNNPCTVEEEMSVPLKDLIERHAGGVIGGWDNLLGVIPGGSSTPLIPLSVCDDVLMDFDA 352
Query: 365 LKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKV 424
L Q+GLGTAA+IV +K DV+ IARL FYKHESCGQCTPCREG W+ IM R
Sbjct: 353 LVQAQTGLGTAALIVFNKQADVIKGIARLIEFYKHESCGQCTPCREGCNWMLKIMNRFTE 412
Query: 425 GNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
GNAK EIDML E++KQIEGHTICALGD AAWPVQGLIRH+RPE+E+R+KE AE++
Sbjct: 413 GNAKTSEIDMLWELSKQIEGHTICALGDGAAWPVQGLIRHYRPEIEQRMKEFAEKQ 468
>gi|407776917|ref|ZP_11124188.1| NADH dehydrogenase I subunit F [Nitratireductor pacificus pht-3B]
gi|407301082|gb|EKF20203.1| NADH dehydrogenase I subunit F [Nitratireductor pacificus pht-3B]
Length = 434
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/420 (75%), Positives = 362/420 (86%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF N+YG D LKG M RG W T+ L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFNNIYGQFDRSLKGVMARGHWDNTRGLIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADESEPGTCKDR+IMRHDPH L+EGCLIAG M A AA
Sbjct: 62 TGLKWSFMPKDPGDRPHYLVVNADESEPGTCKDRDIMRHDPHTLVEGCLIAGFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+RA E Y AGL+GKN +G+D DV++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQRAIDECYDAGLIGKNN-KNGWDMDVYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR+NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGASWFSSFGRENNKGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PCTVEEEMSIP +ELI+RHCGG+RGGWDNLLAVIPGGSSVPL+P H D
Sbjct: 241 LFCISGHVNNPCTVEEEMSIPFRELIERHCGGIRGGWDNLLAVIPGGSSVPLVPAHEIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+DAL+ ++SGLGTAAVIVMDKSTD+V AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 TPMDFDALRELKSGLGTAAVIVMDKSTDIVKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MERL VG A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGL+RHFRPE+ERRI E +
Sbjct: 361 VMERLVVGQAQKHEIDMLLDVTKQVEGHTICALGDAAAWPIQGLVRHFRPEIERRIDEFS 420
>gi|301111442|ref|XP_002904800.1| NADH dehydrogenase flavoprotein 1, mitochondrial precursor
[Phytophthora infestans T30-4]
gi|262095130|gb|EEY53182.1| NADH dehydrogenase flavoprotein 1, mitochondrial precursor
[Phytophthora infestans T30-4]
Length = 498
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/463 (70%), Positives = 375/463 (80%), Gaps = 8/463 (1%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHD 73
S+ R + LS R F T A + +P +GGLKDEDRIFTN+YG
Sbjct: 3 SVARVAQKTLSQA-RGFRTSAAVANAAEEPA------MARVYGGLKDEDRIFTNVYGEDT 55
Query: 74 PFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
+ GA++RGDWHRTKDL+ G DWIV E+K SGLRGRGGAGFPSGLKWSFMPK +DGRP
Sbjct: 56 WRVDGAVRRGDWHRTKDLLCMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKQTDGRP 115
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
S+LVVNADESEPGTCKDREIMR DPHKL+EGCLIAG MRA AAY+YIRGE+ NE L+
Sbjct: 116 SFLVVNADESEPGTCKDREIMRKDPHKLVEGCLIAGFAMRARAAYVYIRGEFFNEALILQ 175
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EAY G LG+NACGSGYDFDV++H GAGAYICGEET LLESLEG+QGKPRLKPPFP
Sbjct: 176 EAIHEAYQRGFLGRNACGSGYDFDVYLHRGAGAYICGEETGLLESLEGRQGKPRLKPPFP 235
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
AN GLYGCPTTVTNVETVAVSPTILRRG WFAS GRKNN GTKLFC+SGHVN PCTVEE
Sbjct: 236 ANTGLYGCPTTVTNVETVAVSPTILRRGGSWFASLGRKNNHGTKLFCISGHVNNPCTVEE 295
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAV-QSGL 372
EMSIPL++LI+RHCGGVRGGWDNL A IPGGSSVP+L + +C D++MDYD LK SGL
Sbjct: 296 EMSIPLRDLIERHCGGVRGGWDNLQACIPGGSSVPVLDEELCQDIMMDYDDLKQRGGSGL 355
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAV + DKS D+V AI R S+FY HESCGQCTPCREGTGW+ ++ R++ G+A+LEEI
Sbjct: 356 GTAAVTIFDKSVDMVGAIRRYSHFYTHESCGQCTPCREGTGWMEKVLTRMETGDAELEEI 415
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
ML+E+++QIEGHTICALGDAAAWPVQGLIR F+ +L RI++
Sbjct: 416 PMLEEISRQIEGHTICALGDAAAWPVQGLIRKFKHKLVERIED 458
>gi|426252134|ref|XP_004019773.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 1 [Ovis aries]
Length = 465
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/426 (75%), Positives = 364/426 (85%), Gaps = 1/426 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS-TDVVDAIARLSYFYKHESCGQCTPC 408
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+S T++V AIARL FYKHESCGQCTPC
Sbjct: 327 IPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSPTNIVKAIARLIEFYKHESCGQCTPC 386
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
REG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPE
Sbjct: 387 REGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPE 446
Query: 469 LERRIK 474
LE R++
Sbjct: 447 LEERMQ 452
>gi|51230625|ref|NP_001003747.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Danio rerio]
gi|50925098|gb|AAH78648.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Danio rerio]
Length = 492
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/435 (74%), Positives = 370/435 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG L D+DRIFTNLYG HD LKGA++RGDW++TK+++ KG DWI+NE+K SGLR
Sbjct: 58 PKKTKFGPLADQDRIFTNLYGRHDWRLKGALRRGDWYKTKEILDKGVDWILNEIKTSGLR 117
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDREIMR+DPHKL+EGCL+AG
Sbjct: 118 GRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRNDPHKLIEGCLVAG 177
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A EAYAAGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 178 RAMGARAAYIYIRGEFYNESSNLQVAINEAYAAGLIGKNACGSGYDFDVFVMRGAGAYIC 237
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WFA FG
Sbjct: 238 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGTWFAGFG 297
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGVRGGWDNLL VIPGGSS PL
Sbjct: 298 RERNSGTKLFNISGHVNNPCTVEEEMSIPLKELIERHAGGVRGGWDNLLCVIPGGSSTPL 357
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P+H+CD VLMD+DAL Q+GLGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCR
Sbjct: 358 IPQHVCDTVLMDFDALIQAQTGLGTAALIVMDKSTDVIRAIARLIEFYKHESCGQCTPCR 417
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EIDM+ E++KQIEGHTICALGD AAWPVQGLIRHFRP +
Sbjct: 418 EGVDWMNKMMWRFVKGDARSAEIDMIWEISKQIEGHTICALGDGAAWPVQGLIRHFRPLM 477
Query: 470 ERRIKEHAERELLEA 484
E RI + +++ A
Sbjct: 478 ESRIADFQQKQQARA 492
>gi|402222943|gb|EJU03008.1| NADH-ubiquinone oxidoreductase [Dacryopinax sp. DJM-731 SS1]
Length = 508
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/429 (73%), Positives = 365/429 (85%), Gaps = 3/429 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P H+GGLKD+DRIFTNLY HD LKGA RGDWHRTKD++ KG WI+ +K SGLR
Sbjct: 28 PPVRHYGGLKDQDRIFTNLYSRHDHGLKGAQSRGDWHRTKDILNKGDAWIIQTMKDSGLR 87
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 88 GRGGAGFPSGLKWSFMNKPGWKEDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCL 147
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+ E ++++A EAY AGL+GKNACGSGYDFDV++H GAGA
Sbjct: 148 VAGRAMNATAAYIYIRGEFYQEASHVQQAINEAYRAGLIGKNACGSGYDFDVYLHRGAGA 207
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCP+TV NVETV+V+PTI RRG WFA
Sbjct: 208 YICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPSTVANVETVSVAPTICRRGGQWFA 267
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ N GTKLFC+SGHVN PCT+EEEMSIPLK+L+++HCGGVRGGWDNLL +IPGGSS
Sbjct: 268 SFGRERNQGTKLFCISGHVNNPCTIEEEMSIPLKDLVEKHCGGVRGGWDNLLGIIPGGSS 327
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP+LPK+ C++VLMD+D+L+ QSGLGT AVIVMDKSTDVV AIAR S+FYKHESCGQCT
Sbjct: 328 VPILPKNKCEEVLMDFDSLRDAQSGLGTGAVIVMDKSTDVVQAIARFSHFYKHESCGQCT 387
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT W+ +M+R G + EIDML E+TKQ+EG TICALGDAAAWP+QGL+RHFR
Sbjct: 388 PCREGTTWMMNMMDRFAEGRGQSREIDMLLEITKQVEGRTICALGDAAAWPIQGLMRHFR 447
Query: 467 PELERRIKE 475
PE+E+R+ +
Sbjct: 448 PEIEKRLAD 456
>gi|426252136|ref|XP_004019774.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 2 [Ovis aries]
Length = 456
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/431 (74%), Positives = 365/431 (84%), Gaps = 1/431 (0%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVK 104
P P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK
Sbjct: 13 PARTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVK 72
Query: 105 KSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EG
Sbjct: 73 TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEG 132
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GA
Sbjct: 133 CLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 192
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG W
Sbjct: 193 GAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAW 252
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGG
Sbjct: 253 FASFGRERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGG 312
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS-TDVVDAIARLSYFYKHESCG 403
SS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+S T++V AIARL FYKHESCG
Sbjct: 313 SSTPLIPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSPTNIVKAIARLIEFYKHESCG 372
Query: 404 QCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIR 463
QCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIR
Sbjct: 373 QCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIR 432
Query: 464 HFRPELERRIK 474
HFRPELE R++
Sbjct: 433 HFRPELEERMQ 443
>gi|443896626|dbj|GAC73970.1| hypothetical protein PANT_9d00361 [Pseudozyma antarctica T-34]
Length = 715
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/474 (67%), Positives = 377/474 (79%), Gaps = 3/474 (0%)
Query: 10 LQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLY 69
+QRASLV + R + L + + +T S + FGGL+D+DRIF N Y
Sbjct: 208 MQRASLVARGAARSAKSLNNVAKIACATPSQARGLATVTDTPVRSFGGLRDQDRIFQNAY 267
Query: 70 GMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK-- 127
HD LKGA RGDWHRTKD++LKG DWI+ ++K SG+RGRGGAGFPSGLKWSFM K
Sbjct: 268 MRHDHGLKGAKARGDWHRTKDILLKGHDWIIQQMKDSGMRGRGGAGFPSGLKWSFMNKPG 327
Query: 128 -VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 186
D RP YLV+NADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIY+RGE+
Sbjct: 328 WEKDPRPRYLVINADEGEPGTCKDREIMRGDPHKLIEGCLVAGRAMNANAAYIYVRGEFY 387
Query: 187 NERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 246
E +L+ A +EAYA GL+GKNACGSGYDFDV++H GAGAYICGEETAL+ESLEGKQGKP
Sbjct: 388 LEVAHLQHAIKEAYADGLIGKNACGSGYDFDVYVHKGAGAYICGEETALIESLEGKQGKP 447
Query: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVN 306
RLKPPFPA+ G++GCPTTV NVETVA +PTI+RRGP WFA FGR N GTKLF +SGHVN
Sbjct: 448 RLKPPFPADVGVFGCPTTVANVETVAAAPTIIRRGPTWFAGFGRDKNQGTKLFAISGHVN 507
Query: 307 KPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 366
PC VEEEMSIPLKELI+RHCGGVRGGWDNLL ++PGGSSVP+LPKH C++VLMD+D+L+
Sbjct: 508 NPCVVEEEMSIPLKELIERHCGGVRGGWDNLLGIVPGGSSVPILPKHKCEEVLMDFDSLR 567
Query: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 426
QS LGT AVIVMDKSTDVV AI+R + FYKHESCGQCTPCREGT WL +MER + G
Sbjct: 568 ENQSSLGTGAVIVMDKSTDVVQAISRFAKFYKHESCGQCTPCREGTTWLANMMERFEEGR 627
Query: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
EIDM+ E+TKQ+EGHTICAL DAAAWP+QGL+R FRPE+E R++ + E+
Sbjct: 628 GNNREIDMIYELTKQMEGHTICALADAAAWPIQGLLRWFRPEIEERMRLYQEKN 681
>gi|410911742|ref|XP_003969349.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Takifugu rubripes]
Length = 472
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/481 (68%), Positives = 389/481 (80%), Gaps = 12/481 (2%)
Query: 7 VLSLQRA---SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDR 63
+LSL RA + R + G+ + + ++ STP+ KT FG L DEDR
Sbjct: 1 MLSLSRAVVAGVTRVPAAVSQAGVSAITRFNSTAQSTPK---------KTTFGPLADEDR 51
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWS 123
IFTNLYG HD LKGA++RGDW++TK+++LKG DWI+NE+K SGLRGRGGAGFP+G+KWS
Sbjct: 52 IFTNLYGRHDWRLKGALRRGDWYKTKEILLKGVDWILNEIKVSGLRGRGGAGFPTGMKWS 111
Query: 124 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 183
FM K SDGRP YLVVNADE EPGTCKDREIMR+DPHKL+EGCL+AG M A AAYIYIRG
Sbjct: 112 FMNKPSDGRPKYLVVNADEGEPGTCKDREIMRNDPHKLVEGCLVAGRAMGARAAYIYIRG 171
Query: 184 EYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 243
E+ NE NL+ A EAYAAGL+GKNACGSGYDFDV + GAGAYICGEETAL+ESLEGKQ
Sbjct: 172 EFYNESSNLQVAINEAYAAGLIGKNACGSGYDFDVFVMRGAGAYICGEETALIESLEGKQ 231
Query: 244 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSG 303
GKPRLKPPFPA+ G++GCPTTV NVETV+V+PTI RRG WF FGR+ NSGTKLF +SG
Sbjct: 232 GKPRLKPPFPADVGVFGCPTTVANVETVSVAPTICRRGGSWFVGFGRERNSGTKLFNISG 291
Query: 304 HVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 363
HVN PCTVEEEMS+PLK+LI+RH GGVRGGWDNLLAVIPGGSS PL+PK++C++VLMD+D
Sbjct: 292 HVNHPCTVEEEMSVPLKDLIERHAGGVRGGWDNLLAVIPGGSSTPLIPKNVCEEVLMDFD 351
Query: 364 ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 423
L Q+GLGTAA+IVMDKSTD++ AIARL FYKHESCGQCTPCREG W+ +M R
Sbjct: 352 GLIQAQTGLGTAALIVMDKSTDIIRAIARLIEFYKHESCGQCTPCREGVDWMNKMMWRFV 411
Query: 424 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLE 483
G+A+ EIDM+ E++KQIEGHTICALGD AAWPVQGLIRHFRP +E RI E+ +R+
Sbjct: 412 KGDARPTEIDMIWELSKQIEGHTICALGDGAAWPVQGLIRHFRPVMESRISENQQRQQAR 471
Query: 484 A 484
A
Sbjct: 472 A 472
>gi|350401231|ref|XP_003486092.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Bombus impatiens]
Length = 469
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/466 (69%), Positives = 371/466 (79%), Gaps = 5/466 (1%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGG-LKDEDRIFTNLYGMH 72
++VRC + + R G+ S Q PE GG L D+DRIFTNLYG H
Sbjct: 4 TIVRC----IQLPRRQLGFLGSPLCSQQQRTFADAAPEGKKKGGPLADQDRIFTNLYGRH 59
Query: 73 DPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
D L+GA+KRGDW++TK+++ KGADWI+NE+K SGLRGRGGAGFPSG+KWSFM K SDGR
Sbjct: 60 DWRLQGALKRGDWYKTKEIIEKGADWIINEIKVSGLRGRGGAGFPSGMKWSFMNKPSDGR 119
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVN DE EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N+
Sbjct: 120 PKYLVVNGDEGEPGTCKDREILRHDPHKLVEGCLIAGRAMGACAAYIYIRGEFYNEASNM 179
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAY AGL+GKNACGSGYDFD+ + GAGAYICGEETAL+ES+EGKQGKPRLKPPF
Sbjct: 180 QVAIAEAYQAGLIGKNACGSGYDFDIFVQRGAGAYICGEETALIESIEGKQGKPRLKPPF 239
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GL+GCPTTVTNVETVAV+PTI RRG WFASFGR N GTKLF +SGHVN PCTVE
Sbjct: 240 PADVGLFGCPTTVTNVETVAVAPTICRRGGAWFASFGRIRNHGTKLFNISGHVNNPCTVE 299
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CD VL+D+D L VQS
Sbjct: 300 EEMSIPLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKSVCDTVLLDFDDLVRVQSSF 359
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVM+K TD++ AI RL FYKHESCGQCTPCREG W++ IM R G A++ EI
Sbjct: 360 GTAAVIVMNKQTDIIKAITRLISFYKHESCGQCTPCREGISWMYKIMRRFAQGQAEIHEI 419
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
DML E+TKQIE HTICAL D AAWPVQGLIRHFRPE+E RIKE +
Sbjct: 420 DMLWELTKQIEMHTICALADGAAWPVQGLIRHFRPEIEARIKERKQ 465
>gi|322710840|gb|EFZ02414.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Metarhizium
anisopliae ARSEF 23]
Length = 486
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/458 (70%), Positives = 371/458 (81%), Gaps = 11/458 (2%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
+V L + +G +T P K +GGLKD+DRIF NLYG P LK A K G
Sbjct: 11 AVSLSRNAVRGLATVQDGTP--------KRTYGGLKDQDRIFQNLYGRFPPDLKSAKKMG 62
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNA 140
DWH+TK+++LKG DWI+NE+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNA
Sbjct: 63 DWHKTKEIILKGHDWIINEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNA 122
Query: 141 DESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAY 200
DE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+V E L+ A EAY
Sbjct: 123 DEGEPGTCKDREIMRKDPHKLVEGCLVAGRAMNATAAYIYIRGEFVYEAAVLQNAINEAY 182
Query: 201 AAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYG 260
GL+GKNACGSGYDFDV IH G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+G
Sbjct: 183 KDGLIGKNACGSGYDFDVFIHRGGGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFG 242
Query: 261 CPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLK 320
CP+TV NVETVAV+PTI RRG WFA FGR+ N GTKL+C+SGHVN PCTVEEEMSIPL+
Sbjct: 243 CPSTVANVETVAVAPTICRRGGSWFAGFGRERNQGTKLYCISGHVNNPCTVEEEMSIPLR 302
Query: 321 ELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVM 380
ELID+HCGGVRGGWDNLLA+IPGGSS P+LPK+ICDD LMD+DALK QSGLGTAAVIVM
Sbjct: 303 ELIDKHCGGVRGGWDNLLAIIPGGSSTPILPKNICDDQLMDFDALKDSQSGLGTAAVIVM 362
Query: 381 DKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTK 440
DKSTDVV AI+RLS+FY+HESCGQCTPCREG+ W IM R + G + EIDMLQE+TK
Sbjct: 363 DKSTDVVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMSRFERGQGREREIDMLQELTK 422
Query: 441 QIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
Q+EGHTICALG+A AWP+QGLIRHFRPELE R+++ A+
Sbjct: 423 QVEGHTICALGEAFAWPIQGLIRHFRPELEARMQKFAQ 460
>gi|340938996|gb|EGS19618.1| NADH:ubiquinone oxidoreductase 51 kDa subunit-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 507
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/435 (73%), Positives = 368/435 (84%), Gaps = 3/435 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG + P LK A K GDW++TK+++LKG DWI+ E+K SGLRGRGGA
Sbjct: 55 YGGLKDQDRIFQNLYGRYPPDLKHAKKMGDWYKTKEILLKGHDWIIGEIKASGLRGRGGA 114
Query: 115 GFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 115 GFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRA 174
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ E L+ A EAYA GL+GKNACGSGYDFDV+IH GAGAY+CGE
Sbjct: 175 MNATAAYIYIRGEFYQEAAILQNAINEAYAEGLIGKNACGSGYDFDVYIHRGAGAYVCGE 234
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVETV+V+PTI RRG WFASFGR+
Sbjct: 235 ETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVSVAPTICRRGGAWFASFGRE 294
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PCTVEEEMSIP++ELI++HCGGVRGGWDNLLAVIPGGSS P+LP
Sbjct: 295 RNHGTKLFCISGHVNNPCTVEEEMSIPMRELIEKHCGGVRGGWDNLLAVIPGGSSTPILP 354
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
KHICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCTPCREG
Sbjct: 355 KHICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCTPCREG 414
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE
Sbjct: 415 SKWTDQIMKRFEKGMGRPREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEA 474
Query: 472 RIKEHAERELLEATA 486
R+K+ AE +A A
Sbjct: 475 RMKKFAEETGGQALA 489
>gi|374292607|ref|YP_005039642.1| NADH-quinone oxidoreductase, subunit F [Azospirillum lipoferum 4B]
gi|357424546|emb|CBS87425.1| NADH-quinone oxidoreductase, subunit F [Azospirillum lipoferum 4B]
Length = 429
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/427 (73%), Positives = 361/427 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTNLYG D L+ A KRGDW T + G DWI+ +VK+SGLRGRGGAGF
Sbjct: 2 LRDEDRIFTNLYGYQDFGLEAARKRGDWDNTASFLANGRDWIIEQVKESGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +P YLV+NADE EPGTCKDR+I+RHDPHKL+EGCLIAG + ASA
Sbjct: 62 TGMKWSFMPKNVTDKPVYLVINADEGEPGTCKDRDILRHDPHKLIEGCLIAGFAIGASAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAYAAGL+GKNACG+GY++DV+IH GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEFYNEGSNVQRAIDEAYAAGLIGKNACGTGYNYDVYIHRGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PR KPPFPA AGLY CPTTV NVE++AV PTILRRG WFA GR NSGTK
Sbjct: 182 SIEGKKGQPRNKPPFPAQAGLYSCPTTVNNVESIAVVPTILRRGASWFAGLGRPKNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEEEM IPLKELI++H GGVRGGWDNLL +IPGGSSVP+LPK ICD
Sbjct: 242 LFCISGHVNKPCNVEEEMGIPLKELIEKHAGGVRGGWDNLLGIIPGGSSVPVLPKSICDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+ VQSGLGTAAVIVMDKSTD+V AIARLS FY HESCGQCTPCREGTGW+
Sbjct: 302 VLMDFDSLREVQSGLGTAAVIVMDKSTDIVKAIARLSSFYAHESCGQCTPCREGTGWMSR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M+R+ GNA++EEIDML +VTKQ+EGHTICALGDAAAWP+QGL RHFRPE+ERRI+ +
Sbjct: 362 VMQRMVTGNARMEEIDMLLQVTKQVEGHTICALGDAAAWPIQGLFRHFRPEVERRIQAYR 421
Query: 478 ERELLEA 484
L A
Sbjct: 422 NSAPLAA 428
>gi|452843280|gb|EME45215.1| hypothetical protein DOTSEDRAFT_87625 [Dothistroma septosporum
NZE10]
Length = 509
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/441 (72%), Positives = 367/441 (83%), Gaps = 4/441 (0%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
PP H GGL+D+DRIFTNLYG H LK AMK GDW++TK+++ KG DW+++E+K SGL
Sbjct: 52 PPVHRH-GGLQDQDRIFTNLYGHHGADLKSAMKYGDWYKTKEIIEKGHDWLISEIKASGL 110
Query: 109 RGRGGAGFPSGLKWSFMPKV---SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
RGRGGAGFPSG+KWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGC
Sbjct: 111 RGRGGAGFPSGMKWSFMNFKGWDDDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGC 170
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
L+AG M +AAYIYIRGE+ +E L+RA QEAY AG LGKNACGSGYD+DV++H G G
Sbjct: 171 LVAGRAMNTTAAYIYIRGEFYHEAAVLQRAIQEAYQAGFLGKNACGSGYDYDVYLHRGMG 230
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI+RRG +WF
Sbjct: 231 AYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTIIRRGAEWF 290
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
FGR+ NSGTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGV GGWDNL A+IPGGS
Sbjct: 291 NKFGRERNSGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVIGGWDNLKAIIPGGS 350
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S P+LPK ICDD LMD+DALK QSGLGTAAVIVMD+STDVV AIARLS FY HESCGQC
Sbjct: 351 STPILPKKICDDQLMDFDALKDSQSGLGTAAVIVMDQSTDVVRAIARLSKFYHHESCGQC 410
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREG+ W IM R + G A+ EIDM+QE+TKQ+EGHTICALG+A AWP+QGLIRHF
Sbjct: 411 TPCREGSKWTEQIMARFERGQAREREIDMMQELTKQVEGHTICALGEAFAWPIQGLIRHF 470
Query: 466 RPELERRIKEHAERELLEATA 486
RPELE RI+ H +R EA A
Sbjct: 471 RPELEARIQGHTQRSGGEALA 491
>gi|393220780|gb|EJD06266.1| NADH-ubiquinone oxidoreductase [Fomitiporia mediterranea MF3/22]
Length = 494
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/445 (72%), Positives = 366/445 (82%), Gaps = 10/445 (2%)
Query: 34 GASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVL 93
G S A+ PP +GGLKD+DRIF N Y HD +KGAM RGDWHRTKD++L
Sbjct: 18 GRSFATVADPP-------VRRYGGLKDQDRIFQNAYCRHDHGIKGAMARGDWHRTKDILL 70
Query: 94 KGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKD 150
KG WI+ +K SGLRGRGGAGFPSGLKWSFM K D RP YLVVNADE EPGTCKD
Sbjct: 71 KGDSWIIQTMKDSGLRGRGGAGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKD 130
Query: 151 REIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNAC 210
REI+R DPHKL+EGCL+AG M A+AAYIYIRGE+ E +L++A EAY AGL+GKNAC
Sbjct: 131 REILRGDPHKLVEGCLVAGRAMNANAAYIYIRGEFFQEASHLQQAINEAYKAGLIGKNAC 190
Query: 211 GSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVET 270
GSGY+FDV++H GAGAY+CGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCP+TV NVET
Sbjct: 191 GSGYNFDVYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPADVGLFGCPSTVANVET 250
Query: 271 VAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGV 330
VAV+PTI RRG WFASFGR+ N GTKLFC+SGHVN PC VEEEMSIPLKEL++RHCGGV
Sbjct: 251 VAVAPTICRRGSSWFASFGRERNQGTKLFCISGHVNNPCVVEEEMSIPLKELVERHCGGV 310
Query: 331 RGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAI 390
RGGWDNLL +IPGGSSVP+LPK C +VLMD+D+LK QSGLGT AVIVMDKSTDVV AI
Sbjct: 311 RGGWDNLLGIIPGGSSVPILPKDKCAEVLMDFDSLKDAQSGLGTGAVIVMDKSTDVVAAI 370
Query: 391 ARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICAL 450
AR ++FYKHESCGQCTPCREGT W+ +M+R G EIDML E+TKQ+EGHTICAL
Sbjct: 371 ARFAHFYKHESCGQCTPCREGTTWMMKMMDRFVEGRGHRREIDMLLELTKQVEGHTICAL 430
Query: 451 GDAAAWPVQGLIRHFRPELERRIKE 475
GDAAAWP+QGL+RHFRPE+ERRI E
Sbjct: 431 GDAAAWPIQGLMRHFRPEVERRIDE 455
>gi|389641475|ref|XP_003718370.1| hypothetical protein MGG_00647 [Magnaporthe oryzae 70-15]
gi|351640923|gb|EHA48786.1| hypothetical protein MGG_00647 [Magnaporthe oryzae 70-15]
Length = 497
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/461 (70%), Positives = 375/461 (81%), Gaps = 4/461 (0%)
Query: 29 SFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRT 88
S +TQ S P P++T +GGL+D+DRIF NLYG + P LK A K GDWH+T
Sbjct: 20 SVATQQQPARSFATVQDGTPAPKRT-YGGLRDQDRIFQNLYGRYPPDLKHAKKMGDWHKT 78
Query: 89 KDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEP 145
K+++LKG DWI+ E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EP
Sbjct: 79 KEIILKGHDWIIGEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEP 138
Query: 146 GTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLL 205
GTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+ A EAYA GL+
Sbjct: 139 GTCKDREIMRKDPHKLIEGCLVAGRAMNATAAYIYIRGEFYHEAAVLQGAINEAYADGLI 198
Query: 206 GKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTV 265
GKNACGSGYDFDV +H G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV
Sbjct: 199 GKNACGSGYDFDVFVHRGGGAYVCGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTV 258
Query: 266 TNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDR 325
NVET+AV+PTI RRG WFA FGR+ N GTKLFC+SG VN PCTVEEEMSIP++ELI++
Sbjct: 259 ANVETIAVAPTICRRGGSWFAGFGRERNQGTKLFCISGQVNNPCTVEEEMSIPMRELIEK 318
Query: 326 HCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTD 385
HCGGVRGGWDNLLAVIPGGSS P+LPK+ICDD LMD+DALK QSGLGTAAVIVMDKS D
Sbjct: 319 HCGGVRGGWDNLLAVIPGGSSTPILPKNICDDQLMDFDALKDSQSGLGTAAVIVMDKSAD 378
Query: 386 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 445
VV AIARLS+FY+HESCGQCTPCREG+ W IM R + G ++ EIDMLQE+TKQ+EGH
Sbjct: 379 VVRAIARLSHFYRHESCGQCTPCREGSKWTEQIMHRFEHGQGRVREIDMLQELTKQVEGH 438
Query: 446 TICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
TICALG+A AWP+QGLIRHFRPELE+R+ + AE+ EA A
Sbjct: 439 TICALGEAFAWPIQGLIRHFRPELEKRMADFAEKTGGEALA 479
>gi|393771616|ref|ZP_10360085.1| NADH dehydrogenase I subunit F [Novosphingobium sp. Rr 2-17]
gi|392722868|gb|EIZ80264.1| NADH dehydrogenase I subunit F [Novosphingobium sp. Rr 2-17]
Length = 436
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/424 (74%), Positives = 365/424 (86%), Gaps = 6/424 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+ L+GA RGDW TKDL+ +GA I++E+K SGLRGRGGAGFP
Sbjct: 3 LADKDRIFTNLYGIQPWNLQGATARGDWDNTKDLIGRGAAAIIDEMKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPK------VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
+G+KWSFMPK + +PS+LV+NADESEPG+CKDREIMRHDPHKLLEG L+AG
Sbjct: 63 TGMKWSFMPKQPPLDQAGNPKPSFLVINADESEPGSCKDREIMRHDPHKLLEGALVAGFA 122
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGEY+ E + L AR EAYAAGLLGKNA GSGYDFDV +H GAGAYICGE
Sbjct: 123 MGARAAYIYIRGEYIREAETLFAARDEAYAAGLLGKNAAGSGYDFDVFVHRGAGAYICGE 182
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETA++ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+SFGR+
Sbjct: 183 ETAMIESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGASWFSSFGRE 242
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NN GTKLF +SGHVN+PC VEEEMSIP +ELI+RHCGG+ GGWDNLLAVIPGGSSVPL+P
Sbjct: 243 NNKGTKLFQISGHVNRPCVVEEEMSIPFRELIERHCGGITGGWDNLLAVIPGGSSVPLVP 302
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
D MD+D LKAV SGLGTAAVIVMDKSTD+V AI+R+SYFYKHESCGQCTPCREG
Sbjct: 303 ASEIMDAPMDFDGLKAVGSGLGTAAVIVMDKSTDIVRAISRISYFYKHESCGQCTPCREG 362
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
TGW+W +MERL+ G+A ++EIDMLQ+VTKQ+EGHTICALGDAAAWP+QGLI+HFRPELER
Sbjct: 363 TGWMWRMMERLRTGDAHIDEIDMLQQVTKQVEGHTICALGDAAAWPIQGLIKHFRPELER 422
Query: 472 RIKE 475
RI E
Sbjct: 423 RIVE 426
>gi|358387444|gb|EHK25039.1| hypothetical protein TRIVIDRAFT_168854 [Trichoderma virens Gv29-8]
Length = 486
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/460 (70%), Positives = 376/460 (81%), Gaps = 11/460 (2%)
Query: 20 SERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGA 79
+ R +V L +T+G +T PP +T +GGLKD+DRIF NLYG + L+ A
Sbjct: 7 TSRKAVSLSRGATRGLATVQDA-------PPVRT-YGGLKDQDRIFQNLYGRYPANLQSA 58
Query: 80 MKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKV---SDGRPSYL 136
K GDWH+TK+++LKG DWI+NE+K SGLRGRGGAGFPSGLKWSFM D +P YL
Sbjct: 59 KKMGDWHKTKEILLKGDDWIINEIKASGLRGRGGAGFPSGLKWSFMNFKGWEKDTKPRYL 118
Query: 137 VVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERAR 196
VVNADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+ A
Sbjct: 119 VVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRAMNATAAYIYIRGEFYHEAAVLQNAI 178
Query: 197 QEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANA 256
EAYA GL+GKNACGSGYDFDV+IH GAGAY+CGEET+L+ES+EGK GKPRLKPPFPA
Sbjct: 179 NEAYADGLIGKNACGSGYDFDVYIHRGAGAYVCGEETSLIESIEGKPGKPRLKPPFPAAV 238
Query: 257 GLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMS 316
G++GCP+TV NVETVAV+PTI RRG WFA FGR+ N GTKLFC+SGHVN PCTVEEEMS
Sbjct: 239 GVFGCPSTVANVETVAVAPTICRRGGSWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMS 298
Query: 317 IPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAA 376
IPL+ELID+HCGGVRGGWDNLLAVIPGGSS P+LPK+ICDD LMD+DALK QSGLGTAA
Sbjct: 299 IPLRELIDKHCGGVRGGWDNLLAVIPGGSSTPILPKNICDDQLMDFDALKDSQSGLGTAA 358
Query: 377 VIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQ 436
VIVMDKS DVV AI+RLS+FY+HESCGQCTPCREG+ W IM R + G + EIDMLQ
Sbjct: 359 VIVMDKSADVVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMSRFEKGQGREREIDMLQ 418
Query: 437 EVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
E+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE R++ +
Sbjct: 419 ELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARMESY 458
>gi|328856677|gb|EGG05797.1| hypothetical protein MELLADRAFT_43743 [Melampsora larici-populina
98AG31]
Length = 510
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/435 (73%), Positives = 367/435 (84%), Gaps = 4/435 (0%)
Query: 44 PPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEV 103
P P PP KTH GGL+D DRIF N Y HD LKGA RGDWHRTKD++LKG D+++ E+
Sbjct: 36 PEVPVPPVKTH-GGLRDSDRIFQNAYMRHDHLLKGAQARGDWHRTKDIILKGHDYLIKEI 94
Query: 104 KKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHK 160
K SGLRGRGGAGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHK
Sbjct: 95 KDSGLRGRGGAGFPSGLKWSFMNKPGFEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHK 154
Query: 161 LLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHI 220
L+EGCL+AG M ASAAYIYIRGE++ E +L+ A +EAY AGL+GKNAC SGYDFDV++
Sbjct: 155 LVEGCLVAGRAMNASAAYIYIRGEFIMEAAHLQNAIEEAYKAGLIGKNACNSGYDFDVYL 214
Query: 221 HYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRR 280
H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI+RR
Sbjct: 215 HRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTIIRR 274
Query: 281 GPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAV 340
G WF SFGR+ NSGTKLFC+SGHVN PC VEEEMSIPL++LID+HCGGV GGWDNLL +
Sbjct: 275 GASWFNSFGRERNSGTKLFCISGHVNTPCVVEEEMSIPLRDLIDKHCGGVIGGWDNLLGI 334
Query: 341 IPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHE 400
+PGGSSVP+L K C++ LMD+D+LK +QSGLGT AVIVM+KSTD++ AIAR + FYKHE
Sbjct: 335 VPGGSSVPVLTKPECEEALMDFDSLKDLQSGLGTGAVIVMNKSTDMISAIARFAKFYKHE 394
Query: 401 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQG 460
SCGQCTPCREGT W+ IM+RL VG A E+DML E+T+QIEGHTICALGDAAAWP+QG
Sbjct: 395 SCGQCTPCREGTTWMEKIMDRLVVGRAHERELDMLWELTRQIEGHTICALGDAAAWPIQG 454
Query: 461 LIRHFRPELERRIKE 475
L+R F+PE+E RI+E
Sbjct: 455 LLRKFKPEVEARIQE 469
>gi|3184148|emb|CAA76757.1| NADH:ubiquinone oxidoreductase 51-kD subunit [Homo sapiens]
Length = 464
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/425 (75%), Positives = 362/425 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKG++ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H G V GGWD LLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGFVTGGWDYLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EERMQ 451
>gi|406861757|gb|EKD14810.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 509
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/436 (71%), Positives = 371/436 (85%), Gaps = 4/436 (0%)
Query: 47 PPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKS 106
PPPP++T +GGL+D+DRIF NLYG H L A K GDW++TK+++LKG +WI++E+K S
Sbjct: 50 PPPPKRT-YGGLRDQDRIFQNLYGHHGADLASAKKYGDWYKTKEILLKGHEWIISEIKAS 108
Query: 107 GLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLE 163
GLRGRGGAGFPSG+KWSFM + +P YLV+NADE EPGTCKDREIMR DPHKLLE
Sbjct: 109 GLRGRGGAGFPSGMKWSFMNFKDWDKENKPRYLVINADEGEPGTCKDREIMRKDPHKLLE 168
Query: 164 GCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYG 223
GCL+AG M +AAYIYIRGE+ +E L+RA QEAY GL+GKNACGSGYDFD+++H G
Sbjct: 169 GCLVAGRAMNCTAAYIYIRGEFYHEATVLQRAIQEAYKDGLIGKNACGSGYDFDIYLHRG 228
Query: 224 AGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPD 283
GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVETVAV+PTI RRG
Sbjct: 229 MGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGS 288
Query: 284 WFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPG 343
WFA FGR+ N+GTKLFC+SGHVN PCTVEEEMS+PL+E+ID+HCGGVRGGWDNLLAVIPG
Sbjct: 289 WFAGFGRERNAGTKLFCISGHVNNPCTVEEEMSVPLREIIDKHCGGVRGGWDNLLAVIPG 348
Query: 344 GSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCG 403
GSS P+LPK ICDD LMD+DALK QSGLGTAAVIVMDKSTD+V AI+RLS+FY+HESCG
Sbjct: 349 GSSTPVLPKSICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSHFYRHESCG 408
Query: 404 QCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIR 463
QCTPCREG+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIR
Sbjct: 409 QCTPCREGSKWTEQIMKRFEKGQGRSREIDMLQELTKQVEGHTICALGEAFAWPIQGLIR 468
Query: 464 HFRPELERRIKEHAER 479
HFRPELE R+K++A +
Sbjct: 469 HFRPELEARMKDYAAK 484
>gi|392382096|ref|YP_005031293.1| NADH-quinone oxidoreductase, subunit F [Azospirillum brasilense
Sp245]
gi|356877061|emb|CCC97862.1| NADH-quinone oxidoreductase, subunit F [Azospirillum brasilense
Sp245]
Length = 430
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/419 (74%), Positives = 360/419 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTNLYG L A KRGDW TK L+ +G +WI+ +VK+SGLRGRGGAGF
Sbjct: 2 LRDEDRIFTNLYGYQSFGLDAARKRGDWDNTKALIAQGKEWIIEQVKESGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +P YLV+NADE EPGTCKDR+I+RHDPHKL+EGCLIAG + ASA
Sbjct: 62 TGMKWSFMPKNVTDKPVYLVINADEGEPGTCKDRDILRHDPHKLIEGCLIAGFAIGASAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY AGL+GKNACG+GYD+D++IH GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEFYNEGSNVQRAIDEAYEAGLIGKNACGTGYDYDIYIHRGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PR KPPFPA AGLY CPTTV NVE++AV PTILRRG WFA GR N+GTK
Sbjct: 182 SIEGKKGQPRNKPPFPAQAGLYSCPTTVNNVESIAVVPTILRRGAAWFAGLGRPKNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEEEM IPLKELI++H GGVRGGWDNLLA+IPGGSSVPLLPK ICD
Sbjct: 242 LFCISGHVNKPCNVEEEMGIPLKELIEKHAGGVRGGWDNLLAIIPGGSSVPLLPKSICDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+ V+SGLGTAAVIVMDKSTDVV AIARLS FY HESCGQCTPCREGTGW+
Sbjct: 302 VLMDFDSLRDVRSGLGTAAVIVMDKSTDVVKAIARLSQFYAHESCGQCTPCREGTGWMNR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IM+R+ GNA++EEIDML EVTKQIEGHTICALGDAAAWP+QGL RHFRPE+ERRI ++
Sbjct: 362 IMQRMVTGNARVEEIDMLLEVTKQIEGHTICALGDAAAWPIQGLFRHFRPEVERRILDY 420
>gi|449546786|gb|EMD37755.1| hypothetical protein CERSUDRAFT_114392 [Ceriporiopsis subvermispora
B]
Length = 501
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/451 (71%), Positives = 368/451 (81%), Gaps = 9/451 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
R F + T +T Q PP H+GGLKD+DRIFTN Y HD LKGAM RGDWHR
Sbjct: 13 RPFRAKLRRTFATVQDPP------VRHYGGLKDQDRIFTNAYCRHDHGLKGAMSRGDWHR 66
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESE 144
TKD++LKG WI+ +K SGLRGRGGAGFPSGLKWSFM K D RP YLVVNADE E
Sbjct: 67 TKDIILKGDSWIIQTIKDSGLRGRGGAGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGE 126
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREI+R DPHKL+EGCL+AG M ASAAYIYIRGE+ E ++++A EAY +GL
Sbjct: 127 PGTCKDREILRGDPHKLVEGCLVAGRAMNASAAYIYIRGEFYQEASHVQQAIDEAYKSGL 186
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
LGK+ACGSGY FDV++H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTT
Sbjct: 187 LGKDACGSGYSFDVYLHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGLFGCPTT 246
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
V NVETVAV+PTI RRG WFA FGRK N GTKLFC+SGHVN PC VEEEMSIPLK+LI+
Sbjct: 247 VANVETVAVAPTICRRGAPWFAGFGRKRNEGTKLFCISGHVNNPCVVEEEMSIPLKDLIE 306
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
+HCGGVRGGWDNLL +IPGGSSVP++P ++C +VLMDYD+LK QSGLGT AVIVMDKST
Sbjct: 307 KHCGGVRGGWDNLLGIIPGGSSVPVIPPNVCAEVLMDYDSLKDAQSGLGTGAVIVMDKST 366
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+V AIAR ++FYKHESCGQCTPCREGT W+ +M+R G EIDML E+TKQIEG
Sbjct: 367 DIVKAIARFAHFYKHESCGQCTPCREGTTWMMNMMDRFVEGRGHQREIDMLLELTKQIEG 426
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKE 475
TICALGDAAAWP+QGL+RHFRPE+E RI +
Sbjct: 427 RTICALGDAAAWPIQGLMRHFRPEVEARITK 457
>gi|323508270|emb|CBQ68141.1| probable NADH2 dehydrogenase (ubiquinone) flavoprotein 1
[Sporisorium reilianum SRZ2]
Length = 508
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/474 (67%), Positives = 382/474 (80%), Gaps = 5/474 (1%)
Query: 10 LQRASLVRCYSERLSVGLRSFSTQGASTASTPQP-PPPPPPPEKTHFGGLKDEDRIFTNL 68
+QRASLV + R + L S +T S + P ++H GGL+D+DRIF N
Sbjct: 1 MQRASLVARSAARSAKSLNSVVKVACATPSHARGLATVTDTPVRSH-GGLRDQDRIFQNA 59
Query: 69 YGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK- 127
Y HD LKGA RGDWHRTKD++LKG DWI++++K+SG+RGRGGAGFPSGLKWSFM K
Sbjct: 60 YMRHDHGLKGAKARGDWHRTKDILLKGHDWIISQMKESGMRGRGGAGFPSGLKWSFMNKP 119
Query: 128 --VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEY 185
D RP YLV+NADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIY+RGE+
Sbjct: 120 GWEKDPRPRYLVINADEGEPGTCKDREIMRGDPHKLIEGCLVAGRAMNANAAYIYVRGEF 179
Query: 186 VNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGK 245
E +L+ A +EAYA GL+GKNACGSGYDFDV++H GAGAYICGEETAL+ESLEGKQGK
Sbjct: 180 YLEVAHLQHAIKEAYADGLIGKNACGSGYDFDVYVHKGAGAYICGEETALIESLEGKQGK 239
Query: 246 PRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHV 305
PRLKPPFPA+ G++GCPTTV NVETVA +PTI+RRGP WFA FGR N GTKLF +SGHV
Sbjct: 240 PRLKPPFPADVGVFGCPTTVANVETVAAAPTIIRRGPAWFAGFGRDKNQGTKLFAISGHV 299
Query: 306 NKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDAL 365
N PC VEEEMSIPL+ELI+RHCGGVRGGWDNLL ++PGGSSVP+LPKH C+ VLMD+D+L
Sbjct: 300 NTPCVVEEEMSIPLQELIERHCGGVRGGWDNLLGIVPGGSSVPILPKHKCEQVLMDFDSL 359
Query: 366 KAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVG 425
+ QS LGT AVIVMDK+TDVV AI+R + FYKHESCGQCTPCREGT WL +MER + G
Sbjct: 360 RENQSSLGTGAVIVMDKTTDVVQAISRFAKFYKHESCGQCTPCREGTTWLANMMERFEEG 419
Query: 426 NAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
L EIDM+QE+TKQ+EGHTICAL DAAAWP+QGL+R FRPE+E R++ + E+
Sbjct: 420 RGNLREIDMIQELTKQMEGHTICALADAAAWPIQGLLRWFRPEIEERMRLYQEK 473
>gi|400599913|gb|EJP67604.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Beauveria bassiana
ARSEF 2860]
Length = 486
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/432 (73%), Positives = 366/432 (84%), Gaps = 4/432 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P++T +GGLKD+DRIF NLYG + L A K GDWH+TK+++LKG DWI+NEVK SGLR
Sbjct: 30 PKRT-YGGLKDQDRIFQNLYGRYPADLASAKKMGDWHKTKEIILKGHDWIINEVKTSGLR 88
Query: 110 GRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 89 GRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCL 148
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE++ E + L++A EAY GL+GKNACGSGYDFDV IH GAGA
Sbjct: 149 VAGRAMNATAAYIYIRGEFIYEAEVLQKAINEAYKDGLIGKNACGSGYDFDVFIHRGAGA 208
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG +WFA
Sbjct: 209 YVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGNWFA 268
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKLFC+SGHVN P TVEEEMSIPL+ELID+HCGGVRGGWDNLLA+IPGGSS
Sbjct: 269 GFGRERNQGTKLFCISGHVNNPATVEEEMSIPLRELIDKHCGGVRGGWDNLLAIIPGGSS 328
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P+LPK+ICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCT
Sbjct: 329 TPILPKNICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCT 388
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ W IM R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFR
Sbjct: 389 PCREGSKWTEQIMSRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFR 448
Query: 467 PELERRIKEHAE 478
PELE R+ + A+
Sbjct: 449 PELEARMAKFAQ 460
>gi|391343053|ref|XP_003745829.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Metaseiulus occidentalis]
Length = 465
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/465 (72%), Positives = 380/465 (81%), Gaps = 7/465 (1%)
Query: 15 LVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDP 74
L RC L LR+FS+ A+ TP P +T FG LKDEDRIF NLYG HD
Sbjct: 3 LQRCNGA-LRGSLRAFSSSAATPPGTPPPQ------TRTKFGPLKDEDRIFQNLYGRHDW 55
Query: 75 FLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPS 134
LKGAM RG+W++TK++V KGADWI+NEVK SGLRGRGGAGFP+GLKWSFM K SDGRP
Sbjct: 56 RLKGAMSRGEWYKTKEIVEKGADWIINEVKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPK 115
Query: 135 YLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLER 194
YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG M A AAYIYIRGE+ NE NL+
Sbjct: 116 YLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGRAMGARAAYIYIRGEFYNEASNLQI 175
Query: 195 ARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPA 254
A +EAY AG LGKNAC SGYDFDV++H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA
Sbjct: 176 AIKEAYQAGFLGKNACNSGYDFDVYVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPA 235
Query: 255 NAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEE 314
+ G++GCPTTVTNVETVAV+PTI RRG WFASFGR NSGTKLF +SGHVN PCTVEEE
Sbjct: 236 DVGVFGCPTTVTNVETVAVAPTICRRGGAWFASFGRTRNSGTKLFNISGHVNNPCTVEEE 295
Query: 315 MSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGT 374
MSIPLKELI+RH GGV GGWDNLL VIPGGSS P++P+ +CD VLMD+DAL Q+GLGT
Sbjct: 296 MSIPLKELIERHSGGVIGGWDNLLCVIPGGSSTPVIPRSVCDTVLMDFDALVEAQTGLGT 355
Query: 375 AAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDM 434
AA+IVM+K TD++ AI RL FYKHESCGQCTPCREG GW+ IMER G+A++EEIDM
Sbjct: 356 AAIIVMNKQTDIIRAIHRLIEFYKHESCGQCTPCREGVGWMNKIMERFVRGDARIEEIDM 415
Query: 435 LQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
+ E++KQIEGH+ICALGD AAWPVQGLIRHFRP +E RI + R
Sbjct: 416 IYEISKQIEGHSICALGDGAAWPVQGLIRHFRPIVESRIADFQAR 460
>gi|346326104|gb|EGX95700.1| NADH-ubiquinone oxidoreductase [Cordyceps militaris CM01]
Length = 486
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/440 (72%), Positives = 369/440 (83%), Gaps = 4/440 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P++T +GGLKD+DRIF NLYG + L A K GDWH+TK+++LKG DWI+NEVK SGLR
Sbjct: 30 PKRT-YGGLKDQDRIFQNLYGRYPADLASAKKMGDWHKTKEIILKGHDWIINEVKASGLR 88
Query: 110 GRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 89 GRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCL 148
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE++ E + L+ A EAY GL+GKNACGSGYDFDV++H GAGA
Sbjct: 149 VAGRAMNATAAYIYIRGEFIYEAEVLQTAINEAYKDGLIGKNACGSGYDFDVYLHRGAGA 208
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG +WFA
Sbjct: 209 YVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGNWFA 268
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKLFC+SGHVN P TVEEEMSIPL+ELID+HCGGVRGGWDNLLA+IPGGSS
Sbjct: 269 GFGRERNQGTKLFCISGHVNNPATVEEEMSIPLRELIDKHCGGVRGGWDNLLAIIPGGSS 328
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P+LPK+ICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCT
Sbjct: 329 TPILPKNICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCT 388
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ W IM R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFR
Sbjct: 389 PCREGSKWTEQIMSRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFR 448
Query: 467 PELERRIKEHAERELLEATA 486
PELE R+ + A+ EA A
Sbjct: 449 PELEARMAKFAQENGGEAFA 468
>gi|169868608|ref|XP_001840875.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|116498033|gb|EAU80928.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 516
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/429 (72%), Positives = 364/429 (84%), Gaps = 3/429 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P +GGLKD+DRIFTN+Y HD +KGAM RGDWH+TK+++LKG WI+ +K SGLR
Sbjct: 43 PPVRRYGGLKDQDRIFTNVYSRHDHGIKGAMSRGDWHKTKEILLKGDAWIIQTIKDSGLR 102
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM K D RP YLV+NADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 103 GRGGAGFPSGLKWSFMNKPGWEKDPRPRYLVINADEGEPGTCKDREILRGDPHKLIEGCL 162
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+ E ++++A EAYAAG +GKNACGSGYDFDV++H GAGA
Sbjct: 163 VAGRAMNANAAYIYIRGEFYQEASHVQQAINEAYAAGFIGKNACGSGYDFDVYVHRGAGA 222
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFA
Sbjct: 223 YICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGGSWFA 282
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ N GTKL+C+SGHVN PC VEEEMSIPLK+LI++HCGGVRGGWDNLL ++PGGSS
Sbjct: 283 SFGRQRNEGTKLYCISGHVNNPCVVEEEMSIPLKDLIEKHCGGVRGGWDNLLGIVPGGSS 342
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP++PK +C +VLMD+D+LK Q+GLGT AVIVMDKSTDVV AI+R + FYKHESCGQCT
Sbjct: 343 VPIIPKDVCAEVLMDFDSLKDAQTGLGTGAVIVMDKSTDVVRAISRFADFYKHESCGQCT 402
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT W+ +M+R+ G A EIDML E+TKQIEG TICALGDAAAWP+QGL+RHFR
Sbjct: 403 PCREGTTWMKKMMDRMVEGRAHQREIDMLLELTKQIEGRTICALGDAAAWPIQGLMRHFR 462
Query: 467 PELERRIKE 475
PE+ERRI E
Sbjct: 463 PEVERRIAE 471
>gi|55741424|ref|NP_001006973.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Rattus norvegicus]
gi|54035438|gb|AAH83709.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Rattus norvegicus]
gi|149061920|gb|EDM12343.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, isoform CRA_a
[Rattus norvegicus]
Length = 464
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/425 (75%), Positives = 361/425 (84%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA +RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQRRGDWYKTKEILLKGPDWILGEMKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNAC S YDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACDSDYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVLGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVM+ STD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMNSSTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRIK 474
E R++
Sbjct: 447 EDRMQ 451
>gi|332024708|gb|EGI64897.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Acromyrmex echinatior]
Length = 470
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/464 (69%), Positives = 370/464 (79%), Gaps = 5/464 (1%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGG-LKDEDRIFTNLYGMH 72
++VRC+ + R G+S S Q PE GG L DEDRIFTNLYG H
Sbjct: 4 AIVRCFQ----IPRRQLGLLGSSLNSQQQRTLADAAPEGKKRGGPLADEDRIFTNLYGRH 59
Query: 73 DPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
D LKGAM RGDW++TK+++ KGADWI+NE+K SGLRGRGGAGFPSG+KWSFM K SDGR
Sbjct: 60 DWRLKGAMSRGDWYKTKEIIDKGADWIINEIKISGLRGRGGAGFPSGMKWSFMNKPSDGR 119
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLV+N DE EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N+
Sbjct: 120 PKYLVINGDEGEPGTCKDREILRHDPHKLVEGCLIAGRAMGACAAYIYIRGEFYNEASNM 179
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAY AGL+GKNAC SGYDFD+ + GAGAYICGEETAL+ES+EGKQGKPRLKPPF
Sbjct: 180 QVAIAEAYQAGLIGKNACNSGYDFDIFVQRGAGAYICGEETALIESIEGKQGKPRLKPPF 239
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ G++GCPTTVTNVETVAV+PTI RRG WFASFGR N GTKL+ +SGHVN PCTVE
Sbjct: 240 PADVGVFGCPTTVTNVETVAVAPTICRRGGAWFASFGRPRNHGTKLYNISGHVNNPCTVE 299
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CD VL+D+D L VQS
Sbjct: 300 EEMSIPLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKSVCDTVLLDFDDLIRVQSSF 359
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVM+K TD++ AI RL FYKHESCGQCTPCREG W++ I++R GNA++ EI
Sbjct: 360 GTAAVIVMNKQTDIIKAITRLISFYKHESCGQCTPCREGISWMYKILKRFVEGNAEVHEI 419
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
DML E+TKQIE HTICAL D AAWPVQGLIRHFRPE+E R+ E
Sbjct: 420 DMLWELTKQIELHTICALADGAAWPVQGLIRHFRPEIEARMNEQ 463
>gi|444510165|gb|ELV09500.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Tupaia chinensis]
Length = 460
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/425 (75%), Positives = 361/425 (84%), Gaps = 4/425 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFASFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHA----GGWDNLLAVIPGGSSTPL 322
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 323 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 382
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 383 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 442
Query: 470 ERRIK 474
E R++
Sbjct: 443 EERMQ 447
>gi|163793192|ref|ZP_02187168.1| NADH dehydrogenase subunit D [alpha proteobacterium BAL199]
gi|159181838|gb|EDP66350.1| NADH dehydrogenase subunit D [alpha proteobacterium BAL199]
Length = 434
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/419 (75%), Positives = 362/419 (86%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YG D L GA KRGDW TK L+ + + +V VK SGLRGRGGAGFP
Sbjct: 2 LKDDDRIFTNVYGWFDWGLDGARKRGDWSNTKALLAQTPEELVEAVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +P YLVVNADESEPGTCKDR+I+RH+PHKL+EGCLI G MRA AA
Sbjct: 62 TGLKWSFMPKEVKEKPHYLVVNADESEPGTCKDRDILRHEPHKLIEGCLIGGYSMRAKAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE +NL+ A +AY AGL+GKNACGSGYDFDV +H GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFYNEAQNLQAAIDQAYDAGLIGKNACGSGYDFDVFLHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV PTILRRGP+WFA+ GR NSGTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVVPTILRRGPEWFAALGRPKNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PC VEEE+ IPL+ELID+H GGV GGWDNLL VIPGGSSVP+LPK ICDD
Sbjct: 242 LFCISGHVNNPCNVEEELGIPLRELIDKHAGGVIGGWDNLLGVIPGGSSVPVLPKSICDD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+ V+SGLGTAAVIVM++STD+V AIARLS FYKHESCGQCTPCREGTGW+W
Sbjct: 302 VLMDFDSLREVRSGLGTAAVIVMNQSTDIVKAIARLSAFYKHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A ++EID+L+EV++QIEGHTICALGDAAAWPVQGLIRHFRPE+ERRI +
Sbjct: 362 VMERMVRGEADVDEIDVLEEVSRQIEGHTICALGDAAAWPVQGLIRHFRPEMERRIAAY 420
>gi|164662034|ref|XP_001732139.1| hypothetical protein MGL_0732 [Malassezia globosa CBS 7966]
gi|159106041|gb|EDP44925.1| hypothetical protein MGL_0732 [Malassezia globosa CBS 7966]
Length = 509
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/433 (71%), Positives = 370/433 (85%), Gaps = 4/433 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P++TH GGL+D+DRIF NLYG HD LKGA+ RGDWHRT+D++ +G ++I+N++K SG+R
Sbjct: 36 PKRTH-GGLRDQDRIFQNLYGQHDFRLKGALARGDWHRTRDIIERGHEFIINQMKASGIR 94
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSG+KWSFM K D RP YLV+NADE EPGTCKDREIMRHDPHKL+EGCL
Sbjct: 95 GRGGAGFPSGMKWSFMLKPGWEKDPRPRYLVINADEGEPGTCKDREIMRHDPHKLIEGCL 154
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+ E NL+ A EAY AGL+GKNACGSGYDFDV++H GAGA
Sbjct: 155 VAGRAMGANAAYIYIRGEFFLEAYNLQVAINEAYKAGLIGKNACGSGYDFDVYVHRGAGA 214
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPR+KPPFPA+ G++GCPTTV NVETV+V+PTI+RRGP+WFA
Sbjct: 215 YICGEETALIESLEGKQGKPRMKPPFPADTGVFGCPTTVANVETVSVAPTIIRRGPEWFA 274
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ N GTKL+ +SGHVN+PC VEEEMSIPLKELI+RHCGGVRGGWDNLLAVIPGGSS
Sbjct: 275 SFGRERNHGTKLYAISGHVNRPCVVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSS 334
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P++PK +C+ LMD+D+L+ QS LGT AVIVMDKSTD+V AIARL+ FY HESCGQCT
Sbjct: 335 TPMIPKEVCERTLMDFDSLRDNQSALGTGAVIVMDKSTDLVKAIARLTKFYHHESCGQCT 394
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT WL +M R + G A L EIDM+ E+T+Q+EGHTIC L DA+AWP+QGL+RHFR
Sbjct: 395 PCREGTAWLDSMMTRFENGRASLREIDMIWEITRQMEGHTICGLADASAWPIQGLLRHFR 454
Query: 467 PELERRIKEHAER 479
P +E RIKE+ +
Sbjct: 455 PVVEERIKEYVAK 467
>gi|198415470|ref|XP_002131638.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) flavoprotein
1, 51kDa [Ciona intestinalis]
Length = 457
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/423 (73%), Positives = 362/423 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYG HD LKGAM+RGDW++TK+++LKG DW++ ++K+SGLRGRGGAGFP
Sbjct: 30 LKDQDRIFTNLYGRHDWKLKGAMQRGDWYKTKEIILKGNDWVLQQIKESGLRGRGGAGFP 89
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFM + DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AGV M A AA
Sbjct: 90 TGMKWSFMNRPPDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLVAGVAMGARAA 149
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE NL A +EAY AGL+GK++CGSGYDFD+ +H GAGAYICGEET+L+E
Sbjct: 150 YIYIRGEFYNEASNLNVAIKEAYDAGLIGKDSCGSGYDFDIFVHRGAGAYICGEETSLIE 209
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGKQGKPRLKPPFPA G++GCPTTV NVETVAV+PTI RR P WFA FGR+ N+GTK
Sbjct: 210 SLEGKQGKPRLKPPFPAEVGVFGCPTTVANVETVAVAPTICRRTPQWFAGFGRERNTGTK 269
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCTVEE MSIP+KELI+RHCGGVRGGWDNLL VIPGGSS PLLPK+ICDD
Sbjct: 270 LFNISGHVNHPCTVEETMSIPMKELIERHCGGVRGGWDNLLCVIPGGSSTPLLPKNICDD 329
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL V SGLGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG W+
Sbjct: 330 VLMDFDALVEVTSGLGTAALIVMDKSTDVIRAIARLMEFYKHESCGQCTPCREGVTWMND 389
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++R G+A EEID L E++KQ+EGHTICALGD AAWP QGLIRH RP +E R+K +
Sbjct: 390 TLQRFTRGDADPEEIDSLWEISKQVEGHTICALGDGAAWPAQGLIRHMRPVIEERMKAYH 449
Query: 478 ERE 480
+ +
Sbjct: 450 QNK 452
>gi|85374157|ref|YP_458219.1| NADH dehydrogenase I subunit F [Erythrobacter litoralis HTCC2594]
gi|84787240|gb|ABC63422.1| NADH-ubiquinone dehydrogenase chain F 1 [Erythrobacter litoralis
HTCC2594]
Length = 430
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 362/420 (86%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LK A RGDW TK L+ +G + I+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNVYGFQDWGLKAAQARGDWDDTKALIARGEENIIEEIKTSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG MRA A
Sbjct: 62 TGLKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALVAGFAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L+ A EAY AGL+GKNA GSG+D+DV +H GAGAYICGEETA++
Sbjct: 122 AYIYIRGEYIREAETLQAAIDEAYDAGLIGKNASGSGFDYDVFLHRGAGAYICGEETAMI 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRRG +WFASFGR+NN GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGGNWFASFGRENNHGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHV KPC VEE MSIP +ELI++HCGG+ GGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVEKPCVVEEAMSIPFEELIEKHCGGITGGWDNLLAVIPGGSSVPLVPAEQIR 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
MD+D LK V SGLGTAAVIVMDKSTD+V AI+R+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 QAPMDFDGLKDVGSGLGTAAVIVMDKSTDIVRAISRISYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A +EEIDMLQ+VTKQ+EGHTICALGDAAAWP+QGLIRHFRPELERRI+EH
Sbjct: 362 RMMERLRTGDAAIEEIDMLQQVTKQVEGHTICALGDAAAWPIQGLIRHFRPELERRIEEH 421
>gi|348685677|gb|EGZ25492.1| hypothetical protein PHYSODRAFT_350142 [Phytophthora sojae]
Length = 500
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/422 (74%), Positives = 363/422 (86%), Gaps = 1/422 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKDEDRIFTN+YG + GA++RGDW+RTKDL+ G DWIV E+K SGLRGRGGA
Sbjct: 39 YGGLKDEDRIFTNVYGEDTWRVDGALRRGDWYRTKDLLCMGPDWIVQEIKDSGLRGRGGA 98
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK +DGRPS+LVVNADESEPGTCKDREIMR DPHKL+EGCL+AG MRA
Sbjct: 99 GFPSGLKWSFMPKQTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGFAMRA 158
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE L+ A EAY G LG+NACGSGYDFDV++H GAGAYICGEET
Sbjct: 159 RAAYIYIRGEFFNEALILQEAIHEAYQRGFLGRNACGSGYDFDVYLHRGAGAYICGEETG 218
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEG+QGKPRLKPPFPAN GLYGCPTTVTNVETVAVSPTILRRG WFAS GRKNNS
Sbjct: 219 LLESLEGRQGKPRLKPPFPANTGLYGCPTTVTNVETVAVSPTILRRGGSWFASLGRKNNS 278
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFC+SGHVN PCTVEEEMSIPL++LI+RHCGGVRGGWDNL A IPGG+SVP+L + +
Sbjct: 279 GTKLFCISGHVNNPCTVEEEMSIPLRDLIERHCGGVRGGWDNLQACIPGGASVPVLDEEL 338
Query: 355 CDDVLMDYDALKAV-QSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTG 413
C D++MDYD LK SGLGTAAV + DKS D+V AI R S+FY HESCGQCTPCREGTG
Sbjct: 339 CQDIMMDYDDLKQRGGSGLGTAAVTIFDKSVDMVGAIRRYSHFYTHESCGQCTPCREGTG 398
Query: 414 WLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
W+ ++ R++ G+A+LEEI ML+E+++QI+GHTICALGDAAAWPVQGLIR F+ +L RI
Sbjct: 399 WMEKVLTRMETGDAELEEIPMLEEISRQIDGHTICALGDAAAWPVQGLIRKFKHKLVERI 458
Query: 474 KE 475
++
Sbjct: 459 ED 460
>gi|94496476|ref|ZP_01303053.1| NADH-quinone oxidoreductase, F subunit [Sphingomonas sp. SKA58]
gi|94424222|gb|EAT09246.1| NADH-quinone oxidoreductase, F subunit [Sphingomonas sp. SKA58]
Length = 445
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/422 (75%), Positives = 358/422 (84%), Gaps = 1/422 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L D+DRIFTN+YG D + AMKRGDW TK L+ G D I+N +K SGLRGRGGAG
Sbjct: 15 GPLADKDRIFTNVYGFQDWGIDAAMKRGDWDNTKALLEIGQDEIINRIKASGLRGRGGAG 74
Query: 116 FPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
FP+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG LIAG MRA
Sbjct: 75 FPTGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALIAGFAMRA 134
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE++ E K L A ++AYA G LGKNACGSGYDFDV +H GAGAYICGEETA
Sbjct: 135 RAAYIYIRGEFIYEAKVLFAAVEQAYAKGFLGKNACGSGYDFDVFVHRGAGAYICGEETA 194
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
+ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRR P+WFAS GR NN
Sbjct: 195 QIESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVGPTILRRSPEWFASIGRPNNL 254
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVNKPC VEE M IP +ELIDRHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 255 GTKLFQISGHVNKPCVVEEAMGIPFRELIDRHCGGIRGGWDNLLAVIPGGSSVPLVPAKE 314
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
D MD+D LKA+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW
Sbjct: 315 IMDAPMDFDGLKALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGW 374
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+W +MERL+ G+A EIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI
Sbjct: 375 MWRVMERLRTGDADQSEIDMLFQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRIA 434
Query: 475 EH 476
E
Sbjct: 435 ER 436
>gi|357026740|ref|ZP_09088833.1| NADH dehydrogenase I subunit F [Mesorhizobium amorphae CCNWGS0123]
gi|355541382|gb|EHH10565.1| NADH dehydrogenase I subunit F [Mesorhizobium amorphae CCNWGS0123]
Length = 434
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 361/420 (85%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF N+YG D L GA+ RG W T ++ KG DWIVNE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFNNIYGRFDKSLAGAISRGAWDNTPGIIAKGRDWIVNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDR+I+RHDPH L+EGCLIAG M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPSYLVVNADESEPGTCKDRDILRHDPHTLVEGCLIAGFAMGAIAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+RA EAY A L+GKN SGYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQRAIDEAYEAKLIGKNNT-SGYDFDIYMHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PCTVEE MSIP +ELI+ HCGG+RGGWDNLLAVIPGG+SVPL+P D
Sbjct: 241 LFCISGHVNNPCTVEEAMSIPFRELIETHCGGIRGGWDNLLAVIPGGASVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+DAL+ ++SGLGTAAVIVMDKSTD+V AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 TPMDFDALRDLKSGLGTAAVIVMDKSTDIVKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MERL G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGL+RHFR E+ERRI E +
Sbjct: 361 VMERLVRGEAQKREIDMLLDVTKQVEGHTICALGDAAAWPIQGLMRHFRGEVERRIDEFS 420
>gi|71896123|ref|NP_001026754.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Gallus gallus]
gi|53136784|emb|CAG32721.1| hypothetical protein RCJMB04_33n14 [Gallus gallus]
Length = 459
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/437 (74%), Positives = 369/437 (84%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG H+ L+GA++RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 23 PKKTQFGSLKDEDRIFTNLYGRHEWRLQGALRRGDWYKTKEILLKGVDWILGEIKASGLR 82
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG
Sbjct: 83 GRGGAGFPTGLKWSFMNKPPDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVAG 142
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGLLGKNACGS Y FDV + GAGAYIC
Sbjct: 143 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLLGKNACGSDYAFDVFVVRGAGAYIC 202
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WFA FG
Sbjct: 203 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGAWFAGFG 262
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGVRGGWDNLLAVIPGGSS PL
Sbjct: 263 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVRGGWDNLLAVIPGGSSTPL 322
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
LPK +C+ VLMD+D+L QSGLGTAAVIVMDKSTD+V AIARL FYKHESCGQCTPCR
Sbjct: 323 LPKSVCETVLMDFDSLVQAQSGLGTAAVIVMDKSTDIVKAIARLIEFYKHESCGQCTPCR 382
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 383 EGVDWMNKVMARFVRGDAQAAEIDALWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 442
Query: 470 ERRIKEHAERELLEATA 486
E R++ E + A+A
Sbjct: 443 EDRMRRFGEAKARAASA 459
>gi|334344825|ref|YP_004553377.1| NADH-quinone oxidoreductase subunit F [Sphingobium chlorophenolicum
L-1]
gi|334101447|gb|AEG48871.1| NADH-quinone oxidoreductase, F subunit [Sphingobium
chlorophenolicum L-1]
Length = 438
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 359/420 (85%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D + AMKRGDW T+ L+ G D I+ +K SGLRGRGGAGFP
Sbjct: 8 LADKDRIFTNVYGFQDWGIDAAMKRGDWDNTRKLMEIGQDEIIERIKASGLRGRGGAGFP 67
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG LIAG MRA A
Sbjct: 68 TGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIVRHDPHKLIEGALIAGFAMRARA 127
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE++ E K L A ++AY G LGKNACGSGYDFDV +H GAGAYICGEETA +
Sbjct: 128 AYIYIRGEFIYEAKVLFAAVEQAYEKGFLGKNACGSGYDFDVFVHRGAGAYICGEETAQI 187
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRRG +WF+SFGR+NN GT
Sbjct: 188 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVGPTILRRGSEWFSSFGRENNKGT 247
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE M I KELIDRHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 248 KLFQISGHVNKPCVVEESMGISFKELIDRHCGGIRGGWDNLLAVIPGGSSVPLVPAKEIM 307
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D L+A+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 308 DAPMDFDGLRALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 367
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A + EIDMLQ+VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI E+
Sbjct: 368 RVMERLRSGDADISEIDMLQQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRINEN 427
>gi|440637186|gb|ELR07105.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
[Geomyces destructans 20631-21]
Length = 513
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/453 (69%), Positives = 371/453 (81%), Gaps = 7/453 (1%)
Query: 29 SFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRT 88
S + Q +T Q P P K +GGL+D+DRIF NLY H P L A K GDWH+T
Sbjct: 39 SAAQQQTRGLATVQDAPAP----KRIYGGLRDQDRIFQNLYSHHGPDLASAKKYGDWHKT 94
Query: 89 KDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKV---SDGRPSYLVVNADESEP 145
K+++ KG DWI++EVK SGLRGRGGAGFPSGLKWSFM +D +P YLVVNADE EP
Sbjct: 95 KEILDKGHDWIISEVKASGLRGRGGAGFPSGLKWSFMNFKGWENDSKPRYLVVNADEGEP 154
Query: 146 GTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLL 205
GTCKDREIMR DPHKLLEGCL+AG M +AAYIYIRGE+++E L+ A QEAY GL+
Sbjct: 155 GTCKDREIMRKDPHKLLEGCLVAGRAMNCTAAYIYIRGEFIHEAAVLQNAIQEAYKDGLI 214
Query: 206 GKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTV 265
GKNAC SGYDFD+++H G GAY+CGEET+L+ESLEGK GKPRLKPPFPA+ GL+GCP+TV
Sbjct: 215 GKNACNSGYDFDIYLHRGMGAYVCGEETSLIESLEGKPGKPRLKPPFPASVGLFGCPSTV 274
Query: 266 TNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDR 325
NVET+AV+PTI RRG DWFA FGR+ N+GTKLFC+SGHVN PCTVEEEMSIPL+ELID+
Sbjct: 275 ANVETIAVAPTICRRGGDWFAGFGRERNAGTKLFCISGHVNNPCTVEEEMSIPLRELIDK 334
Query: 326 HCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTD 385
HCGGVRGGWDNL A+IPGGSS P+LPK +CDD +MD+D LK QSGLGTAAVIVMDKSTD
Sbjct: 335 HCGGVRGGWDNLKAIIPGGSSTPILPKSVCDDQIMDFDGLKDSQSGLGTAAVIVMDKSTD 394
Query: 386 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 445
VV AI+RLS+FY+HESCGQCTPCREG+ W IM+R + G + EIDMLQE+TKQ+EGH
Sbjct: 395 VVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMQRFEKGQGREREIDMLQELTKQVEGH 454
Query: 446 TICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
TICALG+A AWP+QGLIRHFRPELE R+++ AE
Sbjct: 455 TICALGEAFAWPIQGLIRHFRPELEARMQKFAE 487
>gi|449302054|gb|EMC98063.1| hypothetical protein BAUCODRAFT_32062 [Baudoinia compniacensis UAMH
10762]
Length = 490
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/461 (68%), Positives = 373/461 (80%), Gaps = 8/461 (1%)
Query: 29 SFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRT 88
+ S + +T Q PP GL+D+DRIF NLYG H LK AMK GDW++T
Sbjct: 17 NLSKNAVRSMATVQDAPPVQRQR-----GLQDQDRIFQNLYGHHGADLKSAMKYGDWYKT 71
Query: 89 KDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEP 145
K+++LKG DW+++E+K SGLRGRGGAGFPSG+KWSFM D +P YLVVNADE EP
Sbjct: 72 KEMILKGHDWLISEIKASGLRGRGGAGFPSGMKWSFMNFKDWDKDTKPRYLVVNADEGEP 131
Query: 146 GTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLL 205
GTCKDREIMR DPHKL+EGCL+AG M SAAYIYIRGE+ +E L+RA QEAY AGL+
Sbjct: 132 GTCKDREIMRKDPHKLVEGCLVAGRAMNCSAAYIYIRGEFYHEATVLQRAIQEAYKAGLI 191
Query: 206 GKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTV 265
GKNACGSGYDFD+ +H G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV
Sbjct: 192 GKNACGSGYDFDIFVHRGMGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTV 251
Query: 266 TNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDR 325
NVET+AV+PTI+RRG +WF SFGR+ N+GTKLFC+SGHVN PCTVEEEMSIPLKELID+
Sbjct: 252 ANVETIAVAPTIIRRGANWFNSFGRERNAGTKLFCISGHVNNPCTVEEEMSIPLKELIDK 311
Query: 326 HCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTD 385
H GGV GGWDNL A+IPGGSS P+LPK ICD+ LMD+DALK QSGLGTAAVIVMD+STD
Sbjct: 312 HAGGVIGGWDNLKAIIPGGSSTPILPKKICDEQLMDFDALKDSQSGLGTAAVIVMDQSTD 371
Query: 386 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 445
VV AI+RLS FY HESCGQCTPCREG+ W IM+R + G A+ EIDM+QE+TKQ+EGH
Sbjct: 372 VVRAISRLSKFYHHESCGQCTPCREGSKWTDQIMKRFEAGTARAREIDMMQELTKQVEGH 431
Query: 446 TICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
TICALG+A AWP+QGLIRHFRPELE RI+ HA++ EA A
Sbjct: 432 TICALGEAFAWPIQGLIRHFRPELEARIQSHAKKAGGEALA 472
>gi|301771850|ref|XP_002921334.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 461
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/428 (74%), Positives = 361/428 (84%), Gaps = 4/428 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 28 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 87
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 88 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 147
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNAC SGYDFDV + GAGAYIC
Sbjct: 148 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACDSGYDFDVFVVRGAGAYIC 207
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 208 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 267
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PL+ELI++H GGWDNLLAVIPGGSS PL
Sbjct: 268 RERNSGTKLFNISGHVNHPCTVEEEMSVPLRELIEKHA----GGWDNLLAVIPGGSSTPL 323
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 324 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 383
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 384 EGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 443
Query: 470 ERRIKEHA 477
E R++ A
Sbjct: 444 EERMQRFA 451
>gi|398406028|ref|XP_003854480.1| hypothetical protein MYCGRDRAFT_99503 [Zymoseptoria tritici IPO323]
gi|339474363|gb|EGP89456.1| hypothetical protein MYCGRDRAFT_99503 [Zymoseptoria tritici IPO323]
Length = 512
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/439 (72%), Positives = 365/439 (83%), Gaps = 8/439 (1%)
Query: 39 STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW 98
+T Q PP H GGLKD+DRIFTNLYG H LK AMK GDW++TK+++ KG DW
Sbjct: 49 ATVQDAPPV-----AHHGGLKDQDRIFTNLYGHHGADLKSAMKYGDWYKTKEILDKGHDW 103
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKV---SDGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSG+KWSFM D +P YLVVNADE EPGTCKDREIMR
Sbjct: 104 IISEIKASGLRGRGGAGFPSGMKWSFMNFKGWDEDTKPRYLVVNADEGEPGTCKDREIMR 163
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M +AAYIYIRGE+ +E L+RA QEAY AG LGKNACGSGYD
Sbjct: 164 KDPHKLIEGCLVAGRAMNCTAAYIYIRGEFYHEAAVLQRAIQEAYQAGFLGKNACGSGYD 223
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
+DV +H G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+P
Sbjct: 224 YDVFLHRGMGAYVCGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVANVETIAVAP 283
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI+RRG +WF SFGR+ NSGTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGVRGGWD
Sbjct: 284 TIIRRGGEWFNSFGRERNSGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVRGGWD 343
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NL AVIPGGSS P+LPKHICDD +MD+D LK QSGLGTAAVIVMD+STDVV AI+RLS
Sbjct: 344 NLKAVIPGGSSTPILPKHICDDQIMDFDGLKDNQSGLGTAAVIVMDQSTDVVRAISRLSK 403
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FY HESCGQCTPCREG+ W IM R + G A+ EIDM+QE+TKQ+EGHTICALG+A A
Sbjct: 404 FYHHESCGQCTPCREGSKWTEQIMHRFEKGTARAREIDMMQELTKQVEGHTICALGEAFA 463
Query: 456 WPVQGLIRHFRPELERRIK 474
WP+QGLIRHFRPELE RI+
Sbjct: 464 WPIQGLIRHFRPELEARIQ 482
>gi|254294097|ref|YP_003060120.1| NADH dehydrogenase I subunit F [Hirschia baltica ATCC 49814]
gi|254042628|gb|ACT59423.1| NADH-quinone oxidoreductase, F subunit [Hirschia baltica ATCC
49814]
Length = 436
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/419 (74%), Positives = 363/419 (86%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG HD L+GA +RG W+ TK+L+ G +WI +++K SGLRGRGGAGFP
Sbjct: 2 LLDKDRIFTNLYGHHDWSLEGAKQRGAWNSTKELMQFGPEWICDQIKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKW+FMPK RP YLVVNADESEPGTCKDR+IMRHDPH L+EGCLIA MRA+
Sbjct: 62 TGLKWTFMPKEVKDRPHYLVVNADESEPGTCKDRDIMRHDPHLLIEGCLIASYAMRANTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L++A EAY AGL+GKNACGSG+DFD+H+H+GAGAYICGEETALLE
Sbjct: 122 YIYLRGEYIFERERLQQAINEAYKAGLIGKNACGSGWDFDLHVHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPANAGLYG PTTV NVE++AV+PTILRRG WF FGR NN+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPANAGLYGAPTTVNNVESIAVAPTILRRGAGWFKKFGRDNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+F +SGHVN+PC VEEEMSIPLK L++ HCGGVRGGW+NL AVIPGGSSVP++PK ICDD
Sbjct: 242 VFAISGHVNRPCNVEEEMSIPLKTLLETHCGGVRGGWENLKAVIPGGSSVPMIPKDICDD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL+ VQSGLGTAAVIVMD+STDVV AIARL+YFYKHESCGQCTPCREGTGW+W
Sbjct: 302 VLMDFDALREVQSGLGTAAVIVMDQSTDVVRAIARLAYFYKHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EIDML +V+ QIEGHTICALGDAAAWPVQGLIRHFR E+E RI +
Sbjct: 362 VLTRMVKGEAEASEIDMLLDVSYQIEGHTICALGDAAAWPVQGLIRHFRSEIEERISSY 420
>gi|56753822|gb|AAW25108.1| SJCHGC01665 protein [Schistosoma japonicum]
gi|226486990|emb|CAX75360.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Schistosoma
japonicum]
Length = 475
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/422 (74%), Positives = 359/422 (85%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G L DEDRIFTNLYG HD LKGAMKRG W++TK+++LKG+DWI+ E+KKSGLRGRGGA
Sbjct: 38 YGPLSDEDRIFTNLYGRHDWRLKGAMKRGHWYKTKEIILKGSDWIIEEIKKSGLRGRGGA 97
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG M A
Sbjct: 98 GFPSGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHTLIEGCLIAGKAMGA 157
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+ AYIYIRGE+ NE N++ A +EAY AG LGKNACG+G++FDV++H GAGAYICGEETA
Sbjct: 158 NVAYIYIRGEFYNEASNMQLAIKEAYEAGFLGKNACGTGFNFDVYMHRGAGAYICGEETA 217
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAVSPTI RRG DWFASFGR+ N
Sbjct: 218 LIESIEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVSPTICRRGGDWFASFGRERNR 277
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN PCTVEEEMSIP+++LI+RH GGV GGWDNLLAVIPGGSS PLLPK I
Sbjct: 278 GTKLFNISGHVNNPCTVEEEMSIPMRDLIERHAGGVIGGWDNLLAVIPGGSSTPLLPKDI 337
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C VLMD+DAL SGLGTAA+IVM++S DVV+ I+RL FY+HESCGQCTPCREG W
Sbjct: 338 CSTVLMDFDALVQANSGLGTAALIVMNRSADVVNCISRLIKFYEHESCGQCTPCREGCRW 397
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R GNA EIDM+ E++KQ+EG TICAL D AAWPVQGLIRHFRPELE R
Sbjct: 398 MGQIMSRFVKGNANKSEIDMIWEISKQMEGRTICALADGAAWPVQGLIRHFRPELEARFA 457
Query: 475 EH 476
+H
Sbjct: 458 KH 459
>gi|320589001|gb|EFX01469.1| NADH-ubiquinone oxidoreductase mitochondrial precursor [Grosmannia
clavigera kw1407]
Length = 525
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/432 (74%), Positives = 367/432 (84%), Gaps = 4/432 (0%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
PP++T +GGLKD+DRIF NLY + P LK A K GDWH+TK+++LKG +WI++EVK SGL
Sbjct: 68 PPKRT-YGGLKDQDRIFQNLYSRYPPDLKHARKMGDWHKTKEILLKGHEWIISEVKASGL 126
Query: 109 RGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
RGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGC
Sbjct: 127 RGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGC 186
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
LIAG M A+AAYIYIRGE+V E + L+ A EAYA GL+GKNACGSGYDFDV IH GAG
Sbjct: 187 LIAGRAMNATAAYIYIRGEFVYEAEVLQAAINEAYAEGLIGKNACGSGYDFDVFIHRGAG 246
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AY+CGEET+L+ES+EGK GKPRLKPPFPA G++GCP+TVTNVETVAV+PTI RRG WF
Sbjct: 247 AYVCGEETSLIESIEGKPGKPRLKPPFPAAVGVFGCPSTVTNVETVAVAPTICRRGGAWF 306
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
A FGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWD LLAVIPGGS
Sbjct: 307 AGFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWDKLLAVIPGGS 366
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S P+LPK +C+D LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQC
Sbjct: 367 STPILPKSMCEDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQC 426
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREG+ W IM R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHF
Sbjct: 427 TPCREGSKWTEQIMSRFEKGMGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHF 486
Query: 466 RPELERRIKEHA 477
RPELE R+++ A
Sbjct: 487 RPELEARMQKFA 498
>gi|432880969|ref|XP_004073740.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Oryzias latipes]
Length = 472
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/453 (71%), Positives = 376/453 (83%)
Query: 32 TQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDL 91
+QG + T P+KT FG L DEDRIFTNLYG HD LKGA++RGDW++TK++
Sbjct: 20 SQGGVSVITRFNSTAQGTPKKTKFGPLADEDRIFTNLYGRHDWRLKGALRRGDWYKTKEI 79
Query: 92 VLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDR 151
+LKG DWI+NE+K SGLRGRGGAGFP+G+KW FM K SDGRP YLVVNADE EPGTCKDR
Sbjct: 80 LLKGVDWILNEIKGSGLRGRGGAGFPTGMKWGFMNKPSDGRPKYLVVNADEGEPGTCKDR 139
Query: 152 EIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACG 211
EIMR+DPHKL+EGCLIAG M A AAYIYIRGE+ NE NL+ A EAYAAGL+G++ACG
Sbjct: 140 EIMRNDPHKLVEGCLIAGRAMGARAAYIYIRGEFYNESSNLQVAINEAYAAGLIGRDACG 199
Query: 212 SGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETV 271
SGYDFDV + GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETV
Sbjct: 200 SGYDFDVFVMRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVANVETV 259
Query: 272 AVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVR 331
+V+PTI RRG WFA FGR+ NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGVR
Sbjct: 260 SVAPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSIPLKELIERHAGGVR 319
Query: 332 GGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIA 391
GGWDNLLAVIPGGSS PL+PK++C++VLMD+D L Q+GLGTAA+IVMDKSTD++ AIA
Sbjct: 320 GGWDNLLAVIPGGSSTPLIPKNVCEEVLMDFDGLIQAQTGLGTAALIVMDKSTDIIRAIA 379
Query: 392 RLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALG 451
RL FYKHESCGQCTPCREG W+ +M R G+A+ EIDM+ E++KQIEGHTICALG
Sbjct: 380 RLIEFYKHESCGQCTPCREGVDWMNKMMWRFVRGDARPAEIDMIWELSKQIEGHTICALG 439
Query: 452 DAAAWPVQGLIRHFRPELERRIKEHAERELLEA 484
D AAWPVQGLIRHFRP +E RI E +++ A
Sbjct: 440 DGAAWPVQGLIRHFRPVMESRIAEFQQQKQARA 472
>gi|330914723|ref|XP_003296758.1| hypothetical protein PTT_06938 [Pyrenophora teres f. teres 0-1]
gi|311330967|gb|EFQ95153.1| hypothetical protein PTT_06938 [Pyrenophora teres f. teres 0-1]
Length = 506
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/440 (72%), Positives = 368/440 (83%), Gaps = 4/440 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P++T +GGLKD+DRIF NLYG H LK A K GDWH+TK+++LKG +WI++E+K SGLR
Sbjct: 50 PKRT-YGGLKDQDRIFQNLYGHHGADLKSAQKYGDWHKTKEILLKGHEWIISEIKASGLR 108
Query: 110 GRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 109 GRGGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCL 168
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACGSGYDFDV++H G GA
Sbjct: 169 VAGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYQAGLIGKNACGSGYDFDVYLHRGMGA 228
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG +WFA
Sbjct: 229 YVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGNWFA 288
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKL+ +SGHVN+PC VEEEMSIPL++LI++HCGGVRGGWDNL AVIPGGSS
Sbjct: 289 GFGRERNQGTKLYAISGHVNRPCVVEEEMSIPLRDLIEKHCGGVRGGWDNLKAVIPGGSS 348
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P+LPKHICDD LMD+DALK QSG GTAAVIVMDKSTDVV AI RL+ FY HESCGQCT
Sbjct: 349 TPILPKHICDDQLMDFDALKDSQSGFGTAAVIVMDKSTDVVRAITRLAKFYHHESCGQCT 408
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ W IM+R G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFR
Sbjct: 409 PCREGSKWTHQIMDRFYKGQAREREIDMLQELTKQVEGHTICALGEAFAWPLQGLIRHFR 468
Query: 467 PELERRIKEHAERELLEATA 486
PELE RIK++ + EA A
Sbjct: 469 PELEARIKDYGLKNGGEALA 488
>gi|209154510|gb|ACI33487.1| NADH dehydrogenase flavoprotein 1, mitochondrial precursor [Salmo
salar]
gi|223647304|gb|ACN10410.1| NADH dehydrogenase flavoprotein 1, mitochondrial precursor [Salmo
salar]
gi|223673187|gb|ACN12775.1| NADH dehydrogenase flavoprotein 1, mitochondrial precursor [Salmo
salar]
Length = 474
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/479 (69%), Positives = 383/479 (79%), Gaps = 6/479 (1%)
Query: 7 VLSLQRASLVRCYSERLSVGLRSFSTQGASTASTP-QPPPPPPPPEKTHFGGLKDEDRIF 65
+LSL R +LV C + R V + QG T+ T PP+K FG L D+DRIF
Sbjct: 1 MLSLSRLALV-CAAARGPVAV----CQGRVTSITRFNSTTAEAPPKKITFGPLADQDRIF 55
Query: 66 TNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFM 125
TNLYG HD LKGA RGDW++TK+++LKG DWI+NE+K SGLRGRGGAGFP+G+KW FM
Sbjct: 56 TNLYGRHDWRLKGAQSRGDWYKTKEILLKGVDWILNEIKVSGLRGRGGAGFPTGMKWGFM 115
Query: 126 PKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEY 185
K SDGRP YLVVNADE EPGTCKDREIMR+DPHKL+EGCL+AG M A AAYIYIRGE+
Sbjct: 116 NKPSDGRPKYLVVNADEGEPGTCKDREIMRNDPHKLVEGCLVAGRAMGARAAYIYIRGEF 175
Query: 186 VNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGK 245
NE NL+ A EAYAAGL+GKN+CGSGYDFDV + GAGAYICGEETAL+ESLEGKQGK
Sbjct: 176 YNESSNLQVAINEAYAAGLIGKNSCGSGYDFDVFVMRGAGAYICGEETALIESLEGKQGK 235
Query: 246 PRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHV 305
PRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WF FGR+ NSGTKLF +SGHV
Sbjct: 236 PRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGTWFLGFGRERNSGTKLFNISGHV 295
Query: 306 NKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDAL 365
N PCTVEEEMSIPLK+LI+RH GGVRGGWDNLL VIPGGSS PL+P+ +CD VLMD+D L
Sbjct: 296 NTPCTVEEEMSIPLKDLIERHAGGVRGGWDNLLCVIPGGSSTPLIPRSVCDTVLMDFDGL 355
Query: 366 KAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVG 425
Q+GLGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG W+ +M R G
Sbjct: 356 VQAQTGLGTAALIVMDKSTDVIRAIARLIEFYKHESCGQCTPCREGVDWMNKMMWRFVKG 415
Query: 426 NAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEA 484
+A+ EIDM+ E++KQIEGHTICALGD AAWPVQGLIRHFRP +E RI E +++ A
Sbjct: 416 DARAAEIDMIWEISKQIEGHTICALGDGAAWPVQGLIRHFRPIMETRIAEFQQKDQARA 474
>gi|310800932|gb|EFQ35825.1| NADH oxidoreductase [Glomerella graminicola M1.001]
Length = 477
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/426 (74%), Positives = 362/426 (84%), Gaps = 3/426 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG P L A K GDWH+TK+++LKG DWI++EVK SGLRGRGGA
Sbjct: 24 YGGLKDQDRIFQNLYGRMPPTLASAKKMGDWHKTKEIILKGHDWIISEVKASGLRGRGGA 83
Query: 115 GFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 84 GFPSGLKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVAGRA 143
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M ASAAYIYIRGE+V+E L+ A EAY GL+GKNAC SGYDFDV IH GAGAY+CGE
Sbjct: 144 MNASAAYIYIRGEFVHEAAVLQNAINEAYKDGLIGKNACNSGYDFDVFIHRGAGAYVCGE 203
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVETVAV+PTI RRG +WFA FGR+
Sbjct: 204 ETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGNWFAGFGRE 263
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN P TVEEEMSIPL+ELID+HCGGVRGGWDNLLAVIPGGSS P+LP
Sbjct: 264 RNQGTKLFCISGHVNNPVTVEEEMSIPLRELIDKHCGGVRGGWDNLLAVIPGGSSTPILP 323
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K++CD+ LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY HESCGQCTPCREG
Sbjct: 324 KNVCDNQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYAHESCGQCTPCREG 383
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE+
Sbjct: 384 SKWTDQIMKRFEKGQGRPREIDMLQELTKQVEGHTICALGEAFAWPLQGLIRHFRPELEK 443
Query: 472 RIKEHA 477
R++E+A
Sbjct: 444 RMEEYA 449
>gi|226486986|emb|CAX75358.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Schistosoma
japonicum]
Length = 476
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/422 (74%), Positives = 359/422 (85%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G L DEDRIFTNLYG HD LKGAMKRG W++TK+++LKG+DWI+ E+KKSGLRGRGGA
Sbjct: 39 YGPLSDEDRIFTNLYGRHDWRLKGAMKRGHWYKTKEIILKGSDWIIEEIKKSGLRGRGGA 98
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG M A
Sbjct: 99 GFPSGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHTLIEGCLIAGKAMGA 158
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+ AYIYIRGE+ NE N++ A +EAY AG LGKNACG+G++FDV++H GAGAYICGEETA
Sbjct: 159 NVAYIYIRGEFYNEASNMQLAIKEAYEAGFLGKNACGTGFNFDVYMHRGAGAYICGEETA 218
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAVSPTI RRG DWFASFGR+ N
Sbjct: 219 LIESIEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVSPTICRRGGDWFASFGRERNR 278
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN PCTVEEEMSIP+++LI+RH GGV GGWDNLLAVIPGGSS PLLPK I
Sbjct: 279 GTKLFNISGHVNNPCTVEEEMSIPMRDLIERHAGGVIGGWDNLLAVIPGGSSTPLLPKDI 338
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C VLMD+DAL SGLGTAA+IVM++S DVV+ I+RL FY+HESCGQCTPCREG W
Sbjct: 339 CSTVLMDFDALVQANSGLGTAALIVMNRSADVVNCISRLIKFYEHESCGQCTPCREGCRW 398
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R GNA EIDM+ E++KQ+EG TICAL D AAWPVQGLIRHFRPELE R
Sbjct: 399 MGQIMSRFVKGNANKSEIDMIWEISKQMEGRTICALADGAAWPVQGLIRHFRPELEARFA 458
Query: 475 EH 476
+H
Sbjct: 459 KH 460
>gi|226486984|emb|CAX75357.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Schistosoma
japonicum]
Length = 476
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/422 (74%), Positives = 359/422 (85%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G L DEDRIFTNLYG HD LKGAMKRG W++TK+++LKG+DWI+ E+KKSGLRGRGGA
Sbjct: 39 YGPLSDEDRIFTNLYGRHDWRLKGAMKRGHWYKTKEIILKGSDWIIEEIKKSGLRGRGGA 98
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG M A
Sbjct: 99 GFPSGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHTLIEGCLIAGKAMGA 158
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+ AYIYIRGE+ NE N++ A +EAY AG LGKNACG+G++FDV++H GAGAYICGEETA
Sbjct: 159 NVAYIYIRGEFYNEASNMQLAIKEAYEAGFLGKNACGTGFNFDVYMHRGAGAYICGEETA 218
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAVSPTI RRG DWFASFGR+ N
Sbjct: 219 LIESIEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVSPTICRRGGDWFASFGRERNR 278
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN PCTVEEEMSIP+++LI+RH GGV GGWDNLLAVIPGGSS PLLPK I
Sbjct: 279 GTKLFNISGHVNNPCTVEEEMSIPMRDLIERHAGGVIGGWDNLLAVIPGGSSTPLLPKDI 338
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C VLMD+DAL SGLGTAA+IVM++S DVV+ I+RL FY+HESCGQCTPCREG W
Sbjct: 339 CSTVLMDFDALVQANSGLGTAALIVMNRSADVVNCISRLIKFYEHESCGQCTPCREGCRW 398
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R GNA EIDM+ E++KQ+EG TICAL D AAWPVQGLIRHFRPELE R
Sbjct: 399 MGQIMSRFVKGNANKSEIDMIWEISKQMEGRTICALADGAAWPVQGLIRHFRPELEARFA 458
Query: 475 EH 476
+H
Sbjct: 459 KH 460
>gi|294011313|ref|YP_003544773.1| NADH dehydrogenase I chain F [Sphingobium japonicum UT26S]
gi|292674643|dbj|BAI96161.1| NADH dehydrogenase I chain F [Sphingobium japonicum UT26S]
Length = 438
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 357/420 (85%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D + AMKRGDW TK L+ G D I+ +K SGLRGRGGAGFP
Sbjct: 8 LADKDRIFTNVYGFQDWAIDAAMKRGDWDNTKKLLEIGQDEIIERIKASGLRGRGGAGFP 67
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG MRA A
Sbjct: 68 TGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALVAGFAMRARA 127
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE++ E K L A ++AY G LGKNACGSGYDFDV +H GAGAYICGEETA +
Sbjct: 128 AYIYIRGEFIYEAKVLFAAVEQAYEKGFLGKNACGSGYDFDVFVHRGAGAYICGEETAQI 187
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+SFGR+NN GT
Sbjct: 188 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGSAWFSSFGRENNKGT 247
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE M I KELIDRHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 248 KLFQISGHVNKPCVVEESMGISFKELIDRHCGGIRGGWDNLLAVIPGGSSVPLVPAAQIM 307
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LKA+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 308 DAPMDFDGLKALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 367
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A EIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI E+
Sbjct: 368 RVMERLRTGDADQSEIDMLFQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRINEN 427
>gi|325187212|emb|CCA21752.1| ubiquinone oxidoreductase putative [Albugo laibachii Nc14]
Length = 502
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/422 (75%), Positives = 361/422 (85%), Gaps = 1/422 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKDEDRIFTNLYG + GA+KRGDW+RTKDL+ G +WI+ EVK SGLRGRGGA
Sbjct: 42 YGGLKDEDRIFTNLYGEKTWRIDGALKRGDWYRTKDLLCMGPEWIIQEVKDSGLRGRGGA 101
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK +DGRPS+LVVNADESEPGTCKDREIMR DPHKL+EGCL+AG MRA
Sbjct: 102 GFPSGLKWSFMPKQTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLVAGFAMRA 161
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE LE A EAY G LG N+CGSGYDFDV++H GAGAYICGEET+
Sbjct: 162 RAAYIYIRGEFFNEAVILEEAIHEAYQKGFLGVNSCGSGYDFDVYLHRGAGAYICGEETS 221
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGKQGKPRLKPPFPAN GLYGCPTTVTNVETVAVSPTILRRG WFAS GRKNNS
Sbjct: 222 LLESLEGKQGKPRLKPPFPANTGLYGCPTTVTNVETVAVSPTILRRGGSWFASLGRKNNS 281
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFC+SGHVN PCTVEEEMSIPLK+LI++HCGGVRGGW NL A IPGGSSVP+L + +
Sbjct: 282 GTKLFCISGHVNNPCTVEEEMSIPLKDLIEKHCGGVRGGWGNLQACIPGGSSVPVLDEEL 341
Query: 355 CDDVLMDYDALKAV-QSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTG 413
C D++MD+D LK SGLGTAAV + DKS D+V AI RL++FY HESCGQCTPCREGTG
Sbjct: 342 CQDIMMDFDDLKNRGGSGLGTAAVTIFDKSVDMVAAIRRLAHFYTHESCGQCTPCREGTG 401
Query: 414 WLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
W+ I+ +++ G A LEEI ML+E+++QIEGHTICALGDAAAWPVQGLIR F+ ++ RI
Sbjct: 402 WMEAILVKMEKGEADLEEIPMLEEISRQIEGHTICALGDAAAWPVQGLIRKFKHKIIERI 461
Query: 474 KE 475
++
Sbjct: 462 ED 463
>gi|387915470|gb|AFK11344.1| NADH dehydrogenase ubiquinone flavoprotein 1 precursor
[Callorhinchus milii]
Length = 465
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/452 (71%), Positives = 368/452 (81%), Gaps = 5/452 (1%)
Query: 27 LRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWH 86
LR +TQ S S+ Q KT +G L D DRIFTNLYG+HD LKGA+ RGDW+
Sbjct: 13 LRLKATQILSRFSSTQQTQT-----KTKYGPLSDSDRIFTNLYGLHDWGLKGALSRGDWY 67
Query: 87 RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPG 146
+TK+++LKG DWI++EVKKSGLRGRGGAGFP+G+KW FM K SDGRP YLVVNADE EPG
Sbjct: 68 KTKEILLKGVDWILDEVKKSGLRGRGGAGFPTGMKWGFMNKPSDGRPKYLVVNADEGEPG 127
Query: 147 TCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLG 206
TCKDREIMRHDPHKLLEGCL+AG M A AAYIYIRGE+ NE N++ A +EAY AGLLG
Sbjct: 128 TCKDREIMRHDPHKLLEGCLVAGRCMGARAAYIYIRGEFYNESANVQVALREAYEAGLLG 187
Query: 207 KNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVT 266
+NACGSGYDFDV + GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV
Sbjct: 188 RNACGSGYDFDVFVFRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVA 247
Query: 267 NVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRH 326
NVETVAVSP I RRG DWFA FGR+ NSGTKLF +SG+V PCTVEEEMS+PLK+LI+RH
Sbjct: 248 NVETVAVSPAICRRGGDWFAGFGRERNSGTKLFNISGNVVNPCTVEEEMSVPLKDLIERH 307
Query: 327 CGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDV 386
GGV GGWDNLL VIPGGSS PL+PK +C++V+MD+DAL A Q+GLGTAA+IVMDKS DV
Sbjct: 308 AGGVTGGWDNLLCVIPGGSSTPLIPKSVCEEVMMDFDALIAAQTGLGTAALIVMDKSADV 367
Query: 387 VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT 446
V IARL FYKHESCGQCTPCREG W+ ++ R G A+ EID L E++KQ+EGHT
Sbjct: 368 VRCIARLMEFYKHESCGQCTPCREGVDWMNQLLWRFVRGEARPGEIDALWEISKQVEGHT 427
Query: 447 ICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
ICALGD AAWP QGLIRHFRPELE R K E
Sbjct: 428 ICALGDGAAWPAQGLIRHFRPELEERFKRSEE 459
>gi|298711911|emb|CBJ48598.1| NUOF homolog, NADH dehydrogenase (ubiquinone) subunit [Ectocarpus
siliculosus]
Length = 511
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/446 (71%), Positives = 368/446 (82%), Gaps = 1/446 (0%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RS + G S ++ P P P + +GGLKD+DRIFTNLYG D + A+KRGDWH+
Sbjct: 25 RSAAVLGRSLSAAPGAKEEAPEPPRV-YGGLKDQDRIFTNLYGEQDWRVGDALKRGDWHQ 83
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TK+++ G DWIV E+K SGLRGRGGAGFPSGLKWSFMPK +DGRPS+LVVNADESEPGT
Sbjct: 84 TKEIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGT 143
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREIMR DPHKL+EGCL+AG MRA AAYIYIRGEY NE ++ A EAY G LGK
Sbjct: 144 CKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQKGFLGK 203
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFDV++H GAGAYICGEETAL+ESLEG+QGKPRLKPPFPAN G++GCPTTVTN
Sbjct: 204 NACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTN 263
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAV+PTILRRG WFASFGRKNN GTKLF +SGHVN P VEEEMSI L+EL+D+HC
Sbjct: 264 VETVAVAPTILRRGASWFASFGRKNNHGTKLFAISGHVNNPIVVEEEMSITLRELLDKHC 323
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNL AVIPGGSSVP+L + C DV+MD+D LK SGLGTAAV VMDKS D++
Sbjct: 324 GGVRGGWDNLQAVIPGGSSVPVLDINDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMI 383
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
AI RL++FYKHESCGQCTPCREGTGWL ++ +++ G A EI ML+E+++ IEGHTI
Sbjct: 384 AAIRRLAHFYKHESCGQCTPCREGTGWLEQMLVKMEKGEADTREIPMLEEISRSIEGHTI 443
Query: 448 CALGDAAAWPVQGLIRHFRPELERRI 473
CALGDAAAWPVQGLIR F+P +E RI
Sbjct: 444 CALGDAAAWPVQGLIRRFQPVIEERI 469
>gi|406694861|gb|EKC98180.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Trichosporon asahii
var. asahii CBS 8904]
Length = 515
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/456 (69%), Positives = 374/456 (82%), Gaps = 6/456 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
R+F++ A +TP P H+GGLKD+DRIFTNLY HDP +KGA KRGDW+R
Sbjct: 28 RTFASSAACNLATPADSTATP---VRHYGGLKDQDRIFTNLYLRHDPGIKGAEKRGDWYR 84
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESE 144
TKD++LKG WI+N +K+SGLRGRGGAGFPSGLKWSFM K D RP YLVVNADE E
Sbjct: 85 TKDILLKGDTWIINTIKESGLRGRGGAGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGE 144
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE++ E +++A EAYAAG
Sbjct: 145 PGTCKDREIMRGDPHKLVEGCLVAGRAMNANAAYIYIRGEFIEEANAVQKAIDEAYAAGY 204
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
LGK+ACGSGY FDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCP+T
Sbjct: 205 LGKDACGSGYPFDVYVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPST 264
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
V NVETVAV+PTI RRG WFASFGR+ NSGTKLFCVSGHVN PC VEEEMSIPLKEL++
Sbjct: 265 VANVETVAVAPTICRRGGSWFASFGRERNSGTKLFCVSGHVNNPCVVEEEMSIPLKELLE 324
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
+HCGG+RGGWDNL +IPGG SVP++ IC VLMDYD LK + LGT AVIVMD+ST
Sbjct: 325 KHCGGIRGGWDNLKGIIPGGCSVPVIKPDICSTVLMDYDDLKDNGTSLGTGAVIVMDQST 384
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+++AIAR S FYKHESCGQCTPCREGT W+ +M R+ GNA+ EIDML E+TKQ+EG
Sbjct: 385 DMINAIARFSKFYKHESCGQCTPCREGTTWMQNMMNRMVEGNAQEREIDMLLELTKQVEG 444
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
HTICALGDAAAWP+QGL ++FRPE+E R++++ E+
Sbjct: 445 HTICALGDAAAWPIQGLFKNFRPEVEARLRQYHEKN 480
>gi|319782986|ref|YP_004142462.1| NADH-quinone oxidoreductase subunit F [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168874|gb|ADV12412.1| NADH-quinone oxidoreductase, F subunit [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 434
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 362/420 (86%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D L GAM RG W T +V KG +WIVNE+K SGLRGRGGAGFP
Sbjct: 2 LGDKDRIFTNIYGLFDKSLAGAMARGAWDNTPGIVAKGREWIVNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDR+I+R+DPH L+EG L+AG M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPSYLVINADESEPGTCKDRDILRNDPHTLVEGALLAGFAMGAVAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+RA +EAY A L+GKN SGYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQRAIEEAYEAKLIGKNNT-SGYDFDIYMHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PCTVEE MSIP +ELI+ HCGG+RGGWDNLLAVIPGG+SVPL+P D
Sbjct: 241 LFCISGHVNNPCTVEEAMSIPFRELIETHCGGIRGGWDNLLAVIPGGASVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+DAL+ ++SGLGTAAVIVMDKSTDVV AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 APMDFDALRDLKSGLGTAAVIVMDKSTDVVKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MERL G A+ EIDML +VTKQIEGHTICALGDAAAWP+QGL+RHFR E+ERRI E +
Sbjct: 361 VMERLVRGEAQKREIDMLLDVTKQIEGHTICALGDAAAWPIQGLMRHFRGEVERRIDEFS 420
>gi|336369451|gb|EGN97792.1| NADH-binding subunit of NADH:ubiquinone oxidoreductase [Serpula
lacrymans var. lacrymans S7.3]
gi|336382234|gb|EGO23384.1| NdufV1, NADH:ubiquinone oxidoreductase subunit [Serpula lacrymans
var. lacrymans S7.9]
Length = 497
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/450 (71%), Positives = 363/450 (80%), Gaps = 10/450 (2%)
Query: 29 SFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRT 88
+F+T S A+ PP +GGLKD+DRIFTN Y HD LKGA RGDWHRT
Sbjct: 16 AFTTFRRSLATVADPPV-------RRYGGLKDQDRIFTNAYCRHDHGLKGAKSRGDWHRT 68
Query: 89 KDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEP 145
KD++LKG WI+ +K SGLRGRGGAGFPSGLKWSFM K DGRP YLVVNADE EP
Sbjct: 69 KDIILKGDSWIIQTMKDSGLRGRGGAGFPSGLKWSFMNKPGWEKDGRPRYLVVNADEGEP 128
Query: 146 GTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLL 205
GTCKDREI+R DPHKL+EGCLIAG M A+AAYIYIRGE+ E +L++A EAY GL+
Sbjct: 129 GTCKDREILRGDPHKLVEGCLIAGRAMNATAAYIYIRGEFFQEASHLQQAITEAYRDGLI 188
Query: 206 GKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTV 265
GKNACGSGY FDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV
Sbjct: 189 GKNACGSGYTFDVYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPTTV 248
Query: 266 TNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDR 325
NVETVAV+PTI RRG WFA FGR+ N GTKL+C+SGHVN PC VEEEMSIPL+EL++R
Sbjct: 249 ANVETVAVAPTICRRGASWFAGFGRERNQGTKLYCISGHVNNPCVVEEEMSIPLRELVER 308
Query: 326 HCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTD 385
HCGGVRGGWDNLL +IPGGSSVP+LP C +VLMDYD+LK QSGLGT AVIVMDKSTD
Sbjct: 309 HCGGVRGGWDNLLGIIPGGSSVPVLPIDKCGEVLMDYDSLKDAQSGLGTGAVIVMDKSTD 368
Query: 386 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 445
+V AIAR S FYKHESCGQCTPCREGT W+ +M R+ G A EIDML E+TKQ+EG
Sbjct: 369 IVSAIARFSSFYKHESCGQCTPCREGTTWMMNMMNRMVEGRAHRREIDMLLELTKQVEGR 428
Query: 446 TICALGDAAAWPVQGLIRHFRPELERRIKE 475
TICALGDAAAWP+QGL+RHFRP +E RI E
Sbjct: 429 TICALGDAAAWPIQGLMRHFRPLVEARIDE 458
>gi|87200309|ref|YP_497566.1| NADH dehydrogenase I subunit F [Novosphingobium aromaticivorans DSM
12444]
gi|87135990|gb|ABD26732.1| NADH dehydrogenase subunit F [Novosphingobium aromaticivorans DSM
12444]
Length = 428
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/427 (74%), Positives = 364/427 (85%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG L A RGDW TK L+ +G D I+ E+K SGLRGRGGAGFP
Sbjct: 3 LQDKDRIFTNVYGFQPWNLAAARARGDWDNTKALMERGQDAIIEEIKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG LIAG MRA A
Sbjct: 63 TGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALIAGYAMRARA 122
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E L A QEAY AGL+GKNA GSGYDFDV +H GAGAYICGEETA++
Sbjct: 123 AYIYIRGEYIREADTLFAAVQEAYDAGLIGKNASGSGYDFDVFVHRGAGAYICGEETAMI 182
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+SFGR+NN GT
Sbjct: 183 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGASWFSSFGRENNKGT 242
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN+PC VEEEMSIP ELI++HCGG+RGG DNLLAVIPGGSSVPL+P
Sbjct: 243 KLFQISGHVNRPCVVEEEMSIPFSELIEKHCGGIRGGKDNLLAVIPGGSSVPLVPAAEIW 302
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D L+A+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 303 DAPMDFDGLRALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 362
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A +EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI E+
Sbjct: 363 RVMERLRTGDADVEEIDMLFNVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRIAEN 422
Query: 477 AERELLE 483
A RE E
Sbjct: 423 A-REAAE 428
>gi|347528699|ref|YP_004835446.1| NADH-quinone oxidoreductase subunit F [Sphingobium sp. SYK-6]
gi|345137380|dbj|BAK66989.1| NADH-quinone oxidoreductase chain F [Sphingobium sp. SYK-6]
Length = 451
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/419 (75%), Positives = 363/419 (86%), Gaps = 1/419 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTN++G D + AMKRGDW TK L+ G D I++ +K SGLRGRGGAG
Sbjct: 18 GPLEDKDRIFTNVHGYQDWRVDAAMKRGDWDNTKKLLEIGQDGIIDIMKASGLRGRGGAG 77
Query: 116 FPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
FP+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG MRA
Sbjct: 78 FPTGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALVAGFAMRA 137
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE++ E K L A +EAYA G +GKNACGSGYDFDV +H GAGAYICGEETA
Sbjct: 138 RAAYIYIRGEFIYEAKILFAAVEEAYAKGFIGKNACGSGYDFDVFVHRGAGAYICGEETA 197
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
+ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+SFGR+NN
Sbjct: 198 QIESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRENNR 257
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVNKPC +EE MSIP +ELIDRHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 258 GTKLFQISGHVNKPCVIEESMSIPFRELIDRHCGGIRGGWDNLLAVIPGGSSVPLVPAAE 317
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
D MD+D L+A+ SGLGTAAVIVMDKSTD+V AIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 318 IMDAPMDFDGLRALGSGLGTAAVIVMDKSTDIVRAIARLSYFYKHESCGQCTPCREGTGW 377
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+W +MERL G+A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI
Sbjct: 378 MWRVMERLVRGDAEVEEIDMLFQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRI 436
>gi|322791265|gb|EFZ15789.1| hypothetical protein SINV_06284 [Solenopsis invicta]
Length = 469
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/463 (69%), Positives = 367/463 (79%), Gaps = 4/463 (0%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHD 73
++VRC+ V R G+S + P K G L D+DRIFTNLYG HD
Sbjct: 4 AIVRCFQ----VPRRQLGLLGSSLNGQQRTLADAAPEGKKKGGPLADQDRIFTNLYGRHD 59
Query: 74 PFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
LKGAM RGDW++TK+++ KGADWI+NE+K SGLRGRGGAGFPSG+KWSFM K SDGRP
Sbjct: 60 WRLKGAMSRGDWYKTKEIIEKGADWIINEIKVSGLRGRGGAGFPSGMKWSFMNKPSDGRP 119
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLVVN DE EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N +
Sbjct: 120 KYLVVNGDEGEPGTCKDREILRHDPHKLVEGCLIAGRAMGACAAYIYIRGEFYNEASNTQ 179
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EAY AGL+GKNAC SGYDFD+ + GAGAYICGEETAL+ES+EGKQGKPRLKPPFP
Sbjct: 180 VAIAEAYQAGLIGKNACNSGYDFDIFVQRGAGAYICGEETALIESIEGKQGKPRLKPPFP 239
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ G++GCPTTVTNVETVAV+PTI RR WFASFGR N+GTKL+ +SGHVN PCTVEE
Sbjct: 240 ADVGVFGCPTTVTNVETVAVAPTICRRSGAWFASFGRPRNTGTKLYNISGHVNNPCTVEE 299
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
EMSIPLKELI+RH GGV GGWDNLL VIPGGSS P++PK +CD VL+D+D L VQS G
Sbjct: 300 EMSIPLKELIERHAGGVIGGWDNLLGVIPGGSSTPVIPKSVCDTVLLDFDDLIRVQSSFG 359
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
TAAVIVM+K TD++ AI RL FYKHESCGQCTPCREG W+ I++R GNA++ EID
Sbjct: 360 TAAVIVMNKQTDIIKAITRLMSFYKHESCGQCTPCREGISWMHKILKRFVEGNAEVHEID 419
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
ML E+TKQIE HTICAL D AAWPVQGLIRHFRPE+E R+KE
Sbjct: 420 MLWELTKQIELHTICALADGAAWPVQGLIRHFRPEIEARMKEQ 462
>gi|392592320|gb|EIW81647.1| NADH-ubiquinone oxidoreductase [Coniophora puteana RWD-64-598 SS2]
Length = 500
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/427 (74%), Positives = 356/427 (83%), Gaps = 3/427 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P +GGLKD+DRIFTN Y HD LKGA RGDWHRTKD++LKG WI+ +K SGLR
Sbjct: 29 PPVRRYGGLKDQDRIFTNAYCRHDHGLKGAQTRGDWHRTKDILLKGDSWIIQTIKDSGLR 88
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 89 GRGGAGFPSGLKWSFMNKPGWEKDKRPRYLVVNADEGEPGTCKDREILRGDPHKLVEGCL 148
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIY+RGE+V E +L++A EAYAAGL+GKNACGSGY FDV++H GAGA
Sbjct: 149 VAGRAMNATAAYIYMRGEFVQEAAHLQQAINEAYAAGLIGKNACGSGYGFDVYLHRGAGA 208
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFA
Sbjct: 209 YICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGAPWFA 268
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKLFC+SGHVN PC VEEEMSIPLKELI++HCGGVRGGWDNLL +IPGGSS
Sbjct: 269 GFGRERNQGTKLFCISGHVNNPCVVEEEMSIPLKELIEKHCGGVRGGWDNLLGIIPGGSS 328
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP+LP C +VLMDYD+LK QSGLGT AVIVMDKSTD+V AIAR + FYKHESCGQCT
Sbjct: 329 VPVLPIDKCGEVLMDYDSLKDAQSGLGTGAVIVMDKSTDIVSAIARFASFYKHESCGQCT 388
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT W+ +M R G EIDML E+TKQIEG TICALGDAAAWP+QGL+RHFR
Sbjct: 389 PCREGTTWMMNMMNRFVEGRGHRREIDMLLEITKQIEGRTICALGDAAAWPIQGLMRHFR 448
Query: 467 PELERRI 473
PE+E+RI
Sbjct: 449 PEVEKRI 455
>gi|390602885|gb|EIN12277.1| NADH-ubiquinone oxidoreductase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 489
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/425 (73%), Positives = 362/425 (85%), Gaps = 3/425 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIFTN Y HD +KGA RGDWH+TKD++LKG WI+ +K SGLRGRGGA
Sbjct: 32 YGGLKDQDRIFTNAYCRHDHGIKGAQSRGDWHKTKDILLKGDSWIIQTMKDSGLRGRGGA 91
Query: 115 GFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 92 GFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGRA 151
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M ASAAYIYIRGE+ E ++++A EAY AGL+GKNACGSGY+FDV++H GAGAYICGE
Sbjct: 152 MNASAAYIYIRGEFYQEASHVQQAITEAYKAGLIGKNACGSGYNFDVYLHRGAGAYICGE 211
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFASFGR+
Sbjct: 212 ETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGGAWFASFGRE 271
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKL+C+SGHVN PC VEEEMSIPLK+LI++HCGGVRGGWDNLL ++PGGSSVP++P
Sbjct: 272 RNQGTKLYCISGHVNNPCVVEEEMSIPLKDLIEKHCGGVRGGWDNLLGIVPGGSSVPIIP 331
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K C++VLMDYD+LK Q+GLGT AVIVM+KSTDVV AIAR S+FYKHESCGQCTPCREG
Sbjct: 332 KKTCEEVLMDYDSLKDAQTGLGTGAVIVMNKSTDVVKAIARFSHFYKHESCGQCTPCREG 391
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
T W+ +M+RL G EIDML E+TKQ+EG TICALGDAAAWP+QGL+RHFRPE+E+
Sbjct: 392 TTWMMNMMDRLVEGRGHQREIDMLLEITKQVEGRTICALGDAAAWPIQGLMRHFRPEVEK 451
Query: 472 RIKEH 476
RI ++
Sbjct: 452 RIADY 456
>gi|390167268|ref|ZP_10219263.1| NADH dehydrogenase I subunit F [Sphingobium indicum B90A]
gi|389590117|gb|EIM68120.1| NADH dehydrogenase I subunit F [Sphingobium indicum B90A]
Length = 438
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 357/420 (85%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D + AMKRGDW TK L+ G D I+ +K SGLRGRGGAGFP
Sbjct: 8 LADKDRIFTNVYGFQDWAIDAAMKRGDWDNTKKLLEIGQDEIIERIKASGLRGRGGAGFP 67
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG MRA A
Sbjct: 68 TGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALVAGFAMRARA 127
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE++ E K L A ++AY G LGKNACGSGYDFDV +H GAGAYICGEETA +
Sbjct: 128 AYIYIRGEFIYEAKVLFAAVEQAYEKGFLGKNACGSGYDFDVFVHRGAGAYICGEETAQI 187
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+SFGR+NN GT
Sbjct: 188 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGSAWFSSFGRENNKGT 247
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE M I KELIDRHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 248 KLFQISGHVNKPCVVEESMGISFKELIDRHCGGIRGGWDNLLAVIPGGSSVPLVPAAQIM 307
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LKA+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 308 DAPMDFDGLKALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 367
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A EIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI E+
Sbjct: 368 RVMERLRSGDADQGEIDMLFQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRINEN 427
>gi|433774831|ref|YP_007305298.1| NADH-quinone oxidoreductase, F subunit [Mesorhizobium australicum
WSM2073]
gi|433666846|gb|AGB45922.1| NADH-quinone oxidoreductase, F subunit [Mesorhizobium australicum
WSM2073]
Length = 434
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/420 (74%), Positives = 362/420 (86%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D L GAM RG W T +V KG +WIVNE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLFDKSLAGAMARGAWDNTPGIVAKGREWIVNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDR+I+R+DPH L+EG +AG M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPSYLVINADESEPGTCKDRDILRNDPHTLVEGAFLAGFAMGAIAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+RA +EAY A L+GKN SGYDF++++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQRAIEEAYEAKLIGKNNT-SGYDFEIYMHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVN PCTVEE MSIP +ELI+ HCGG+RGGWDNLLAVIPGG+SVPL+P D
Sbjct: 241 LFCVSGHVNNPCTVEEAMSIPFRELIETHCGGIRGGWDNLLAVIPGGASVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+DAL+ ++SGLGTAAVIVMDKSTDVV AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 TPMDFDALRDLKSGLGTAAVIVMDKSTDVVKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MERL G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGL+RHFR E+ERRI E +
Sbjct: 361 VMERLVRGEAQKREIDMLLDVTKQVEGHTICALGDAAAWPIQGLMRHFRGEVERRIDEFS 420
>gi|358394192|gb|EHK43593.1| hypothetical protein TRIATDRAFT_258692 [Trichoderma atroviride IMI
206040]
Length = 486
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/427 (73%), Positives = 364/427 (85%), Gaps = 3/427 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG L+ A K GDWH+TK+++LKG +WI++E+K SGLRGRGGA
Sbjct: 34 YGGLKDQDRIFQNLYGRLPVNLQSAKKMGDWHKTKEILLKGDEWIISEMKASGLRGRGGA 93
Query: 115 GFPSGLKWSFMPKV---SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 94 GFPSGLKWSFMNFKGWEKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRA 153
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ +E L+ A EAYA GL+GKNACGSGYDFDV+IH GAGAY+CGE
Sbjct: 154 MNATAAYIYIRGEFYHEAAILQNAINEAYADGLIGKNACGSGYDFDVYIHRGAGAYVCGE 213
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ET+L+ES+EGK GKPRLKPPFPA G++GCP+TV NVETVAV+PTI RRG +WFA FGR+
Sbjct: 214 ETSLIESIEGKPGKPRLKPPFPAAVGVFGCPSTVANVETVAVAPTICRRGGNWFAGFGRE 273
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGVRGGWDNLLAVIPGGSS P+LP
Sbjct: 274 RNQGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVRGGWDNLLAVIPGGSSTPILP 333
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K++CDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCTPCREG
Sbjct: 334 KNVCDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCTPCREG 393
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
+ W IM R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE
Sbjct: 394 SKWTEQIMSRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEA 453
Query: 472 RIKEHAE 478
R++ +A+
Sbjct: 454 RMESYAK 460
>gi|13471402|ref|NP_102968.1| NADH dehydrogenase I subunit F [Mesorhizobium loti MAFF303099]
gi|14022144|dbj|BAB48754.1| NADH-ubiquinone dehydrogenase chain F 1 [Mesorhizobium loti
MAFF303099]
Length = 434
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 361/420 (85%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D L GAM RG W T +V KG +WIVNE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLFDKSLAGAMARGAWDNTPGIVAKGREWIVNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDR+I+R+DPH L+EG L+AG M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPSYLVINADESEPGTCKDRDILRNDPHTLVEGALLAGFAMGAIAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+RA EAY A L+GK SGYDFDV++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQRAIDEAYEAKLIGKGNT-SGYDFDVYMHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVN PCTVEE MSIP +ELI+ HCGG+RGGWDNLLAVIPGG+SVPL+P D
Sbjct: 241 LFCVSGHVNNPCTVEEAMSIPFRELIETHCGGIRGGWDNLLAVIPGGASVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+DAL+ ++SGLGTAAVIVMDKSTDVV AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 TPMDFDALRDLKSGLGTAAVIVMDKSTDVVKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MERL G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGL+RHFR E+ERRI E +
Sbjct: 361 VMERLVRGEAQKREIDMLLDVTKQVEGHTICALGDAAAWPIQGLMRHFRGEVERRIDEFS 420
>gi|440899417|gb|ELR50720.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial,
partial [Bos grunniens mutus]
Length = 458
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/442 (73%), Positives = 363/442 (82%), Gaps = 18/442 (4%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 3 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 62
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 63 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 122
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 123 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 182
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 183 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 242
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCG------------------GVR 331
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H G GV
Sbjct: 243 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGVPAPALTIHPLGDWLGPRGVT 302
Query: 332 GGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIA 391
GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIA
Sbjct: 303 GGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIA 362
Query: 392 RLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALG 451
RL FYKHESCGQCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALG
Sbjct: 363 RLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALG 422
Query: 452 DAAAWPVQGLIRHFRPELERRI 473
D AAWPVQGLIRHFRPELE R+
Sbjct: 423 DGAAWPVQGLIRHFRPELEERM 444
>gi|110633381|ref|YP_673589.1| NADH dehydrogenase I subunit F [Chelativorans sp. BNC1]
gi|110284365|gb|ABG62424.1| NADH dehydrogenase subunit F [Chelativorans sp. BNC1]
Length = 434
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/418 (75%), Positives = 358/418 (85%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG D L GAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGQFDRSLHGAMARGHWDGTKAILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADESEPGTCKDR+I+RH+PH L+EGCLIAG M A AA
Sbjct: 62 TGLKWSFMPKAPTDRPHYLVVNADESEPGTCKDRDILRHEPHTLVEGCLIAGFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A E YA GLLGKN G+DFDV +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQAAIDECYAHGLLGKNNI-HGWDFDVIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR+NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRENNKGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PCTVEEEMSIP +ELIDRHCGG+RGGWDNLLAVIPGGSSVPL+P D
Sbjct: 241 LFCISGHVNNPCTVEEEMSIPFRELIDRHCGGIRGGWDNLLAVIPGGSSVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D+L+ ++SGLGTAAVIVMDKSTD+V AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 APMDFDSLRDLKSGLGTAAVIVMDKSTDIVKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+MERL G A EIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI E
Sbjct: 361 VMERLVRGEAHKHEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRIDE 418
>gi|337268166|ref|YP_004612221.1| NADH-quinone oxidoreductase, F subunit [Mesorhizobium opportunistum
WSM2075]
gi|336028476|gb|AEH88127.1| NADH-quinone oxidoreductase, F subunit [Mesorhizobium opportunistum
WSM2075]
Length = 434
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/420 (74%), Positives = 360/420 (85%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF N+YG+ D L GAM RG W T ++ KG +WIVNE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFNNIYGLFDKSLAGAMARGAWDNTPGIIAKGREWIVNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDR+I+R+DPH L+EG IAG M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPSYLVVNADESEPGTCKDRDILRNDPHTLVEGSFIAGFAMGAVAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+RA EAY A L+GKN SGYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQRAIDEAYEAKLIGKNNT-SGYDFDIYMHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PCTVEE MSIP +ELI+ HCGG+RGGWDNLLAVIPGG+SVPL+P D
Sbjct: 241 LFCISGHVNNPCTVEEAMSIPFRELIETHCGGIRGGWDNLLAVIPGGASVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+DAL+ ++SGLGTAAVIVMDKSTDVV AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 TPMDFDALRDLKSGLGTAAVIVMDKSTDVVKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MERL G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGL+RHFR E+ERRI E +
Sbjct: 361 VMERLVRGEAQKREIDMLLDVTKQVEGHTICALGDAAAWPIQGLMRHFRGEVERRIDEFS 420
>gi|302684473|ref|XP_003031917.1| hypothetical protein SCHCODRAFT_257275 [Schizophyllum commune H4-8]
gi|300105610|gb|EFI97014.1| hypothetical protein SCHCODRAFT_257275 [Schizophyllum commune H4-8]
Length = 501
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/424 (73%), Positives = 358/424 (84%), Gaps = 3/424 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIFTN Y HD LKGA RGDWHRTKD++LKG WI+ +K SGLRGRGGA
Sbjct: 37 YGGLKDQDRIFTNAYCRHDHGLKGAKSRGDWHRTKDIILKGDSWIIQTIKDSGLRGRGGA 96
Query: 115 GFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM K D RP YLVVNADE EPGTCKDREI+R DPHKL+EGCL+AG
Sbjct: 97 GFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKDREILRGDPHKLIEGCLVAGRA 156
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ E ++++A EAYAAGL+GK+ACGSGY FDV++H GAGAYICGE
Sbjct: 157 MNATAAYIYIRGEFFQEASHVQQAINEAYAAGLIGKDACGSGYSFDVYLHRGAGAYICGE 216
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFASFGR+
Sbjct: 217 ETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGGSWFASFGRE 276
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PC VEEEMSIPLK+LI++HCGGV GGWDNLL ++PGGSSVP+LP
Sbjct: 277 RNQGTKLFCISGHVNNPCVVEEEMSIPLKDLIEKHCGGVIGGWDNLLGIVPGGSSVPILP 336
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
C +VLMDYD+LK QSGLGT AVIVMDKSTDVV AIAR + FYKHESCGQCTPCREG
Sbjct: 337 IDKCSEVLMDYDSLKDAQSGLGTGAVIVMDKSTDVVSAIARFASFYKHESCGQCTPCREG 396
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
T W+ +M R+ G + EIDML E++KQIEG TICALGDAAAWP+QGL+RHFRPE+E+
Sbjct: 397 TTWMMNMMNRMVEGRGHVREIDMLLEISKQIEGRTICALGDAAAWPIQGLMRHFRPEVEK 456
Query: 472 RIKE 475
RI+E
Sbjct: 457 RIEE 460
>gi|380494222|emb|CCF33314.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Colletotrichum
higginsianum]
Length = 477
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/426 (73%), Positives = 361/426 (84%), Gaps = 3/426 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG P L A K GDWH+TK+++LKG DWI++EVK SGLRGRGGA
Sbjct: 24 YGGLKDQDRIFQNLYGRLPPTLASAKKMGDWHKTKEIILKGHDWIISEVKASGLRGRGGA 83
Query: 115 GFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 84 GFPSGLKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVAGRA 143
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+V E L+ A EAY GL+GKNAC SGYDFDV IH GAGAY+CGE
Sbjct: 144 MNATAAYIYIRGEFVQEAAVLQNAINEAYKDGLIGKNACNSGYDFDVFIHRGAGAYVCGE 203
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG +WFA FGR+
Sbjct: 204 ETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGNWFAGFGRE 263
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKL+C+SGHVN P TVEEEMSIPL+ELID+HCGGVRGGWDNLLAVIPGGSS P+LP
Sbjct: 264 RNQGTKLYCISGHVNNPVTVEEEMSIPLRELIDKHCGGVRGGWDNLLAVIPGGSSTPILP 323
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K++CD+ LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY HESCGQCTPCREG
Sbjct: 324 KNVCDNQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYAHESCGQCTPCREG 383
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE+
Sbjct: 384 SKWTDQIMKRFEKGQGRPREIDMLQELTKQVEGHTICALGEAFAWPLQGLIRHFRPELEK 443
Query: 472 RIKEHA 477
R++E+A
Sbjct: 444 RMEEYA 449
>gi|103486791|ref|YP_616352.1| NADH dehydrogenase I subunit F [Sphingopyxis alaskensis RB2256]
gi|98976868|gb|ABF53019.1| NADH-quinone oxidoreductase, F subunit [Sphingopyxis alaskensis
RB2256]
Length = 430
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/420 (75%), Positives = 357/420 (85%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG LK A RGDW T+DL+ +G D I+ E+K SGLRGRGGAGFP
Sbjct: 3 LADKDRIFTNLYGFQPWNLKAAQARGDWDNTRDLMKRGQDAIIEEIKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVSDG-RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK RPS+LV+NADESEPG+CKDREI+RHDPHKL+EG LIAG MRA A
Sbjct: 63 TGLKWSFMPKEPRADRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALIAGYAMRARA 122
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE++ E + L A QEAY AGLLGKNA SGYDFDV +H GAGAYICGEETA++
Sbjct: 123 AYIYIRGEFIREAETLFAAVQEAYDAGLLGKNAAKSGYDFDVFVHRGAGAYICGEETAMI 182
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRRG WFASFGR+NN GT
Sbjct: 183 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAPWFASFGRENNKGT 242
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEEEMSIP +ELIDRHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 243 KLFQISGHVNKPCVVEEEMSIPFRELIDRHCGGIRGGWDNLLAVIPGGSSVPLVPAAEIM 302
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LKAV SGLGTAA IVMDKSTDVV AI+R+SYFYKHESCG CTPCREGTGW+W
Sbjct: 303 DCPMDFDGLKAVGSGLGTAAAIVMDKSTDVVQAISRISYFYKHESCGHCTPCREGTGWMW 362
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A + EID L +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPELERRI+E+
Sbjct: 363 RVMERLRTGDADISEIDTLFDVTKQVEGHTICALGDAAAWPIQGLIRHFRPELERRIREN 422
>gi|307195432|gb|EFN77318.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Harpegnathos saltator]
Length = 470
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/430 (72%), Positives = 358/430 (83%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
P K L D+DRIFTNLYG HD LKGA+ RGDWH+TK+++ KGADWI+NE+K SGL
Sbjct: 37 PEGKKQGSPLSDQDRIFTNLYGRHDWRLKGAISRGDWHKTKEILDKGADWIINEIKVSGL 96
Query: 109 RGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
RGRGGAGFPSG+KWSFM K SDGRP YLV+NADE EPGTCKDREI+RHDPHKL+EGCLIA
Sbjct: 97 RGRGGAGFPSGMKWSFMNKPSDGRPKYLVINADEGEPGTCKDREILRHDPHKLVEGCLIA 156
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
G M A AAYIYIRGE+ NE N++ A EAY AGL+GKNAC SGY+FD+ + GAGAYI
Sbjct: 157 GRAMGACAAYIYIRGEFYNEASNMQVAIAEAYQAGLIGKNACNSGYNFDIFVQRGAGAYI 216
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
CGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PTI RR WFASF
Sbjct: 217 CGEETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVTNVETVAVAPTICRRSGAWFASF 276
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
GR N GTKLF +SGHVNKPCTVEEEMSIPLKELI+RH GGV GGWDNL+ VIPGGSS P
Sbjct: 277 GRPRNHGTKLFNISGHVNKPCTVEEEMSIPLKELIERHAGGVIGGWDNLMGVIPGGSSTP 336
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
++PK +CD VL+D+D L VQS GTAAVIVM+K TD++ AI RL FYKHESCGQCTPC
Sbjct: 337 VIPKSVCDTVLLDFDDLIRVQSSFGTAAVIVMNKQTDIIKAITRLISFYKHESCGQCTPC 396
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
REG W++ I++R GNA++ EIDML E+TKQIE HTICAL D AAWPVQGLIRHFRPE
Sbjct: 397 REGISWMYKILKRFVEGNAEMHEIDMLWELTKQIELHTICALADGAAWPVQGLIRHFRPE 456
Query: 469 LERRIKEHAE 478
+E R+K+ E
Sbjct: 457 IEARMKQQKE 466
>gi|170112662|ref|XP_001887532.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637434|gb|EDR01719.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 501
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/429 (72%), Positives = 361/429 (84%), Gaps = 3/429 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P +GGLKD+DRIFTN Y HD +KGA+ RGDWHRTKD++LKG WI+ ++K SGLR
Sbjct: 33 PPVRRYGGLKDQDRIFTNAYCRHDHGIKGALSRGDWHRTKDIILKGDAWIIQQIKDSGLR 92
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM K +D RP YLV+NADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 93 GRGGAGFPSGLKWSFMNKPGWQNDPRPRYLVINADEGEPGTCKDREILRGDPHKLIEGCL 152
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+ E ++++A EAY AGLLG NACGSGY FDV++H GAGA
Sbjct: 153 VAGRSMNATAAYIYIRGEFYQEASHVQQAIHEAYTAGLLGPNACGSGYAFDVYVHRGAGA 212
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFA
Sbjct: 213 YICGEETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGASWFA 272
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKL+C+SGHVN PC VEEEMSIPLK+LI++HCGGV GGWDNLL ++PGGSS
Sbjct: 273 GFGRERNQGTKLYCISGHVNNPCVVEEEMSIPLKDLIEKHCGGVVGGWDNLLGIVPGGSS 332
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP++PK +C +VLMDYD+LK Q+GLGT AVIVM+KSTD+V AIAR S FYKHESCGQCT
Sbjct: 333 VPVIPKDVCAEVLMDYDSLKDAQTGLGTGAVIVMNKSTDIVAAIARFSQFYKHESCGQCT 392
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT W+ +M R+ G L EIDML E+TKQ+EG TICALGDAAAWP+QGL+RHFR
Sbjct: 393 PCREGTTWMMNMMNRMVEGRGHLREIDMLLELTKQVEGRTICALGDAAAWPIQGLMRHFR 452
Query: 467 PELERRIKE 475
PE+ERRI+E
Sbjct: 453 PEVERRIQE 461
>gi|71004398|ref|XP_756865.1| hypothetical protein UM00718.1 [Ustilago maydis 521]
gi|46095874|gb|EAK81107.1| hypothetical protein UM00718.1 [Ustilago maydis 521]
Length = 846
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/429 (71%), Positives = 361/429 (84%), Gaps = 3/429 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGL+D+DRIF N Y HD LKGA RGDWHRTKD++LKG DWI++++K+SG+RGRGGA
Sbjct: 384 YGGLRDQDRIFQNAYMRHDHGLKGAKARGDWHRTKDILLKGHDWIISQMKESGMRGRGGA 443
Query: 115 GFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM K D RP YLV+NADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 444 GFPSGLKWSFMNKPGWEKDPRPRYLVINADEGEPGTCKDREIMRGDPHKLIEGCLVAGRA 503
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIY+RGE+ E +L+ A +EAYA GL+GKNACGSGYDFDV++H GAGAYICGE
Sbjct: 504 MNANAAYIYVRGEFYLEVAHLQHAIKEAYADGLIGKNACGSGYDFDVYVHKGAGAYICGE 563
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVA +PTI+RRGP WFA FGR
Sbjct: 564 ETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAAAPTIIRRGPSWFAGFGRD 623
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLF +SGHVN PC VEEEMSIPL+ELI+RHCGGVRGGWDNLL ++PGGSSVP+LP
Sbjct: 624 KNQGTKLFAISGHVNNPCVVEEEMSIPLQELIERHCGGVRGGWDNLLGIVPGGSSVPILP 683
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
KH C+ VLMD+D+L+ QS LGT AVIVMDK+TDVV AI+R + FYKHESCGQCTPCREG
Sbjct: 684 KHKCEQVLMDFDSLRENQSSLGTGAVIVMDKTTDVVQAISRFAKFYKHESCGQCTPCREG 743
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
T WL +MER + G EIDM+ E+TKQ+EGHTICAL DAAAWP+QGL+R FRPE+E
Sbjct: 744 TTWLANMMERFEEGRGNNREIDMIYELTKQMEGHTICALADAAAWPIQGLLRWFRPEIEE 803
Query: 472 RIKEHAERE 480
R++ + E+
Sbjct: 804 RMRLYQEKN 812
>gi|407781577|ref|ZP_11128795.1| NADH dehydrogenase I subunit F [Oceanibaculum indicum P24]
gi|407207794|gb|EKE77725.1| NADH dehydrogenase I subunit F [Oceanibaculum indicum P24]
Length = 430
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/429 (73%), Positives = 360/429 (83%), Gaps = 2/429 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYG L A KRGDW +TKD + KG DWI+++VK+SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNLYGQESWQLAAARKRGDWDQTKDFIAKGRDWIIDQVKESGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLV+NADESEPGTCKDREIMRHDP KL+EG LIA M A AA
Sbjct: 62 TGLKWSFMPKEIGPRPHYLVINADESEPGTCKDREIMRHDPQKLIEGALIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L+ A EAY AGLLGKNA GSG+DFD+++H GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEFYNEAMRLQAAIDEAYDAGLLGKNAAGSGWDFDLYLHRGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCP+TV NVE++AV PTILRRG WF+ GR N+GTK
Sbjct: 182 SLEGKKGMPRLKPPFPAAVGLYGCPSTVNNVESIAVVPTILRRGATWFSGLGRPKNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEEEM IPL+EL+++H GGVRGGWDNLLAVIPGGSSVP+LP CD+
Sbjct: 242 LFCISGHVNKPCNVEEEMGIPLRELLEKHAGGVRGGWDNLLAVIPGGSSVPVLPAEQCDE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D L+ +SGLGTAAVIVMDKSTD+V AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 LFMDFDTLREKRSGLGTAAVIVMDKSTDIVKAIARLSYFYKHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ G A + EIDML++VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI HA
Sbjct: 362 VMERMVRGEADIGEIDMLEDVTKQVEGHTICALGDAAAWPIQGLIRHFRPEMERRI--HA 419
Query: 478 ERELLEATA 486
+ + A A
Sbjct: 420 RKGGVSARA 428
>gi|392574335|gb|EIW67471.1| hypothetical protein TREMEDRAFT_45095 [Tremella mesenterica DSM
1558]
Length = 524
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/433 (71%), Positives = 366/433 (84%), Gaps = 4/433 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P H+GGLKD+DRIFTNLY HD +KGA RGDWH+TK+++LKG W++ ++K SGLR
Sbjct: 57 PPVRHYGGLKDQDRIFTNLYCRHDHGIKGARSRGDWHKTKEILLKGDSWLIQQIKDSGLR 116
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL
Sbjct: 117 GRGGAGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCL 176
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+ E ++++A EAY AGL+GKNACGSGYDFDV++H GAGA
Sbjct: 177 VAGRAMNATAAYIYIRGEFYQEASHVQQAIDEAYKAGLIGKNACGSGYDFDVYLHRGAGA 236
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCP+TV NVETVAV+PTI+RRG WFA
Sbjct: 237 YICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPSTVANVETVAVAPTIIRRGGQWFA 296
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTK+FCVSGHVN PC +EEEMSIPL+EL+++HCGG+RGGWDNL +IPGG S
Sbjct: 297 GFGRERNQGTKVFCVSGHVNNPCVIEEEMSIPLQELLEKHCGGIRGGWDNLKGIIPGGCS 356
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP++PK +C+ VLMDYD+LK Q+ LGT AVIVMDKSTD++ AIAR S FYKHESCGQCT
Sbjct: 357 VPVIPKDVCEKVLMDYDSLKDNQTSLGTGAVIVMDKSTDMIAAIARFSKFYKHESCGQCT 416
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT W+ +M+R+ G A+ EIDML E+TKQ+EGHTICALGDAAAWP+QGL+RHFR
Sbjct: 417 PCREGTTWMMNMMDRMVEGRAQEREIDMLLELTKQVEGHTICALGDAAAWPIQGLMRHFR 476
Query: 467 PELERRIKE-HAE 478
PE+E R+ + HA+
Sbjct: 477 PEVEARLAQFHAK 489
>gi|403415599|emb|CCM02299.1| predicted protein [Fibroporia radiculosa]
Length = 496
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/454 (70%), Positives = 365/454 (80%), Gaps = 9/454 (1%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
R F + + +T Q PP +GGLKD+DRIFTN Y HD +KGA RGDWHR
Sbjct: 12 RPFRAKLRRSFATVQDPP------VRRYGGLKDQDRIFTNAYCRHDHGIKGAQTRGDWHR 65
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESE 144
TKD++LKG WI+ +K SGLRGRGGAGFPSGLKWSFM K D RP YLVVNADE E
Sbjct: 66 TKDIILKGDSWIIQTIKDSGLRGRGGAGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGE 125
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREI+R DPHKL+EGCL+AG M A+AAYIYIRGE+ E ++++A EAY AG
Sbjct: 126 PGTCKDREILRGDPHKLIEGCLVAGRAMNATAAYIYIRGEFYQEASHVQQAINEAYTAGF 185
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
LGKNACGSGY FD+++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTT
Sbjct: 186 LGKNACGSGYAFDIYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGLFGCPTT 245
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
V NVETVAV+PTI RRG WFA FGR+ N GTKLFC+SGHVN PC VEEEMSIPLKELI+
Sbjct: 246 VANVETVAVAPTICRRGSAWFAGFGRERNQGTKLFCISGHVNNPCVVEEEMSIPLKELIE 305
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
+HCGGVRGGWDNLL +IPGGSSVP+LP C++VLMDYD+LK QSGLGT AVIVMDKST
Sbjct: 306 KHCGGVRGGWDNLLGIIPGGSSVPVLPIKKCEEVLMDYDSLKDAQSGLGTGAVIVMDKST 365
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+V AIAR ++FYKHESCGQCTPCREGT W+ +M+R G EIDML E+TKQ+EG
Sbjct: 366 DIVKAIARFAHFYKHESCGQCTPCREGTTWMMNMMDRFVEGRGHQREIDMLLELTKQVEG 425
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
TICALGDAAAWP+QGL+RHFRPE+E+RI E
Sbjct: 426 RTICALGDAAAWPIQGLMRHFRPEVEKRIAAFRE 459
>gi|334142123|ref|YP_004535330.1| NADH dehydrogenase I subunit F [Novosphingobium sp. PP1Y]
gi|359401540|ref|ZP_09194508.1| NADH dehydrogenase I subunit F [Novosphingobium pentaromativorans
US6-1]
gi|333940154|emb|CCA93512.1| NADH dehydrogenase I subunit F [Novosphingobium sp. PP1Y]
gi|357597215|gb|EHJ58965.1| NADH dehydrogenase I subunit F [Novosphingobium pentaromativorans
US6-1]
Length = 433
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/425 (74%), Positives = 359/425 (84%), Gaps = 6/425 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG LK A RG W TKD++ KG D I+ E+K SGLRGRGGAGFP
Sbjct: 3 LADKDRIFTNVYGYQPWNLKAAQARGAWDNTKDIIAKGRDLIIEEIKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPK------VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
+G+KWSFMPK + +PS+LV+NADESEPG+CKDREI+RHDPH LLEG L+AG
Sbjct: 63 TGMKWSFMPKQPPLDHAGNPKPSFLVINADESEPGSCKDREIIRHDPHLLLEGALVAGFA 122
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGEY+ E + L AR EAYAAGLLGKNA GSGYDFDV +H GAGAYICGE
Sbjct: 123 MGARAAYIYIRGEYIREAETLFAARDEAYAAGLLGKNAAGSGYDFDVFVHRGAGAYICGE 182
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETA++ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTI+RRG WF+SFGR
Sbjct: 183 ETAMIESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTIMRRGASWFSSFGRD 242
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NN GTKLF +SGHVNKPC VEEEMSIP ELI++HCGG+RGG DNLLAVIPGGSSVPL+P
Sbjct: 243 NNKGTKLFQISGHVNKPCVVEEEMSIPFSELIEKHCGGIRGGRDNLLAVIPGGSSVPLVP 302
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
D MD+D LKAV SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREG
Sbjct: 303 ADQIWDAPMDFDGLKAVGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREG 362
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
TGW+W +MERL+ G+A +EEIDMLQ+VTKQ+EGHTICALGDAAAWP+QGLIRHFRPELER
Sbjct: 363 TGWMWRVMERLRTGDAAVEEIDMLQQVTKQVEGHTICALGDAAAWPIQGLIRHFRPELER 422
Query: 472 RIKEH 476
RI E+
Sbjct: 423 RIAEN 427
>gi|340516454|gb|EGR46702.1| predicted protein [Trichoderma reesei QM6a]
Length = 486
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/427 (72%), Positives = 363/427 (85%), Gaps = 3/427 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGL+D+DRIF NLYG + L+ A K GDWH+TK+++LKG +WI++E+K SGLRGRGGA
Sbjct: 34 YGGLRDQDRIFQNLYGRYPANLQSAKKMGDWHKTKEILLKGDEWIISEIKASGLRGRGGA 93
Query: 115 GFPSGLKWSFMPKV---SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 94 GFPSGLKWSFMNFKGWEKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRA 153
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ +E L+ A EAY+AGL+GKNACGSGYDFDV+IH GAGAY+CGE
Sbjct: 154 MNATAAYIYIRGEFYHEAAILQNAINEAYSAGLIGKNACGSGYDFDVYIHRGAGAYVCGE 213
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ET+L+ES+EGK GKPRLKPPFPA G++GCP+TV NVETVAV+PTI RRG WFA FGR+
Sbjct: 214 ETSLIESIEGKPGKPRLKPPFPAAVGVFGCPSTVANVETVAVAPTICRRGGSWFAGFGRE 273
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PCTVEEEMSIPL+ELI++HCGGVRGGWDNLLAVIPGGSS P+LP
Sbjct: 274 RNQGTKLFCISGHVNNPCTVEEEMSIPLRELIEKHCGGVRGGWDNLLAVIPGGSSTPILP 333
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +CDD LMD+DALK QSGLGTAAVIVMDKS DVV AI+RLS+FY+HESCGQCTPCREG
Sbjct: 334 KSVCDDQLMDFDALKDSQSGLGTAAVIVMDKSADVVRAISRLSHFYRHESCGQCTPCREG 393
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
+ W IM R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE
Sbjct: 394 SKWTEQIMSRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEA 453
Query: 472 RIKEHAE 478
R++ +A+
Sbjct: 454 RMERYAK 460
>gi|326387456|ref|ZP_08209065.1| NADH dehydrogenase I subunit F [Novosphingobium nitrogenifigens DSM
19370]
gi|326208112|gb|EGD58920.1| NADH dehydrogenase I subunit F [Novosphingobium nitrogenifigens DSM
19370]
Length = 430
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/428 (73%), Positives = 363/428 (84%), Gaps = 2/428 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG L A RGDW TK L+ +G D I+ E+K SGLRGRGGAGFP
Sbjct: 3 LADKDRIFTNLYGFQPWNLAAARARGDWDNTKALLERGRDAIIQEMKDSGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG M A A
Sbjct: 63 TGMKWSFMPKESRDGRPSFLVINADESEPGSCKDREIIRHDPHKLVEGALVAGFAMGARA 122
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L A +EAY AGL+G+NA GSGYDFDV +H GAGAYICGEETA++
Sbjct: 123 AYIYIRGEYIREAETLFAAVREAYDAGLIGRNASGSGYDFDVFVHRGAGAYICGEETAMI 182
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ES+EGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GT
Sbjct: 183 ESIEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRDNNKGT 242
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHV+KPC VEEEMSIP +ELI+RHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 243 KLFQISGHVDKPCVVEEEMSIPFRELIERHCGGIRGGWDNLLAVIPGGSSVPLVPSEQIM 302
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D L+A+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 303 DAPMDFDGLRALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 362
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A +EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI E
Sbjct: 363 RVMERLRTGDASVEEIDMLFNVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRIAER 422
Query: 477 -AERELLE 483
A RE E
Sbjct: 423 GAVREAAE 430
>gi|242019360|ref|XP_002430129.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, putative [Pediculus
humanus corporis]
gi|212515220|gb|EEB17391.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, putative [Pediculus
humanus corporis]
Length = 472
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/427 (73%), Positives = 359/427 (84%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
PP KT FG L D+DRIFTNLYG HD L GA KRGDW++TK+++ KG DWI+NE+K SGL
Sbjct: 36 PPTKTKFGPLCDDDRIFTNLYGRHDWRLCGAYKRGDWYKTKEILHKGPDWIINEIKISGL 95
Query: 109 RGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
RGRGGAGFP+G+KW FM K SDGRP YLVVNADE EPGTCKDREI+R+DPHKL+EGCL+A
Sbjct: 96 RGRGGAGFPTGMKWGFMNKPSDGRPKYLVVNADEGEPGTCKDREILRNDPHKLIEGCLVA 155
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
G M A AAYIYIRGE+ NE N++ A EAY AGL+GKNAC SGYDFDV +H GAGAYI
Sbjct: 156 GRAMGAQAAYIYIRGEFYNEASNMQIAIAEAYQAGLIGKNACNSGYDFDVFMHRGAGAYI 215
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
CGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV+NVETVAV+PTI RRG WFASF
Sbjct: 216 CGEETALIESIEGKQGKPRLKPPFPADIGVFGCPTTVSNVETVAVAPTICRRGGSWFASF 275
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
GR NSGTKLF +SGHVN PCTVEEEMSIPLKELI H G V GGWDNLLA+IPGGSS P
Sbjct: 276 GRPRNSGTKLFNISGHVNNPCTVEEEMSIPLKELIQLHAGDVIGGWDNLLAIIPGGSSTP 335
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
L+PK +C++ +MD+D L AVQ+ LGTAAVIVM+K TD+V AIARL FYKHESCGQCTPC
Sbjct: 336 LIPKDVCEEAIMDFDGLVAVQTSLGTAAVIVMNKQTDIVKAIARLIEFYKHESCGQCTPC 395
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
REG W+ I+ R GNA+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE
Sbjct: 396 REGINWMNKIIHRFITGNAEPGEIDMLWELSKQIEGHTICALGDGAAWPVQGLIRHFRPE 455
Query: 469 LERRIKE 475
LE R++
Sbjct: 456 LEARMEN 462
>gi|355751906|gb|EHH56026.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Macaca fascicularis]
Length = 464
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/424 (74%), Positives = 358/424 (84%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAA + + TD+V AIARL FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAGLPLVTQTDIVKAIARLIEFYKHESCGQCTPCR 386
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDAQPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446
Query: 470 ERRI 473
E R+
Sbjct: 447 EERM 450
>gi|114327961|ref|YP_745118.1| NADH dehydrogenase I subunit F [Granulibacter bethesdensis CGDNIH1]
gi|114316135|gb|ABI62195.1| NADH-quinone oxidoreductase chain F [Granulibacter bethesdensis
CGDNIH1]
Length = 438
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/422 (74%), Positives = 362/422 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIFTNLYG HD LKGA+ RGDW T ++ +G D I+ ++K SGLRGRGGAGFP
Sbjct: 2 LNDRDRIFTNLYGEHDWGLKGALARGDWDGTAAILARGRDAIIEDIKISGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPHKL+EGCLIA M A A
Sbjct: 62 TGMKWSFMPKESDGRPHYLVVNADESEPGTCKDRDILRHDPHKLVEGCLIAAFAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE+ NE +L+ A +AY AGL+GKNACGSG+DFD+++H GAGAYICGEETAL+E
Sbjct: 122 YIYVRGEFYNESCHLQAAIDQAYEAGLIGKNACGSGWDFDLYVHRGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PRLKPPFPA GLYGCPTTV NVE++AV PTILRRG WFAS GR NSGTK
Sbjct: 182 SIEGKKGMPRLKPPFPAGVGLYGCPTTVNNVESIAVCPTILRRGGAWFASLGRPKNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPC VEEE+ IPL+EL++R+ GGVRGGWDNLLAVIPGGSSVPLLPK ICDD
Sbjct: 242 LFSISGHVNKPCNVEEELGIPLRELLERYAGGVRGGWDNLLAVIPGGSSVPLLPKSICDD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+ +SGLGTAAVIVMDKSTDV+ AIARLS+FYKHESCGQCTPCREGTGW+
Sbjct: 302 VLMDFDSLREQRSGLGTAAVIVMDKSTDVIKAIARLSHFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
IM R+ G A LEEIDML++VT+Q+EGHTICALGDAAAWPVQGLIRHFRP +E RI+ +
Sbjct: 362 IMNRMVEGRADLEEIDMLEQVTRQVEGHTICALGDAAAWPVQGLIRHFRPVIEDRIRAYK 421
Query: 478 ER 479
+R
Sbjct: 422 QR 423
>gi|381200917|ref|ZP_09908049.1| NADH dehydrogenase I subunit F [Sphingobium yanoikuyae XLDN2-5]
gi|398386448|ref|ZP_10544449.1| NADH-quinone oxidoreductase, F subunit [Sphingobium sp. AP49]
gi|427411293|ref|ZP_18901495.1| NADH-quinone oxidoreductase subunit F 1 [Sphingobium yanoikuyae
ATCC 51230]
gi|397718231|gb|EJK78823.1| NADH-quinone oxidoreductase, F subunit [Sphingobium sp. AP49]
gi|425710478|gb|EKU73500.1| NADH-quinone oxidoreductase subunit F 1 [Sphingobium yanoikuyae
ATCC 51230]
Length = 444
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/432 (72%), Positives = 361/432 (83%), Gaps = 4/432 (0%)
Query: 46 PPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKK 105
P P P G L D+DRIFTN++G D + AMKRGDW TK L+ G D I++ +K
Sbjct: 5 PAPAP---FVGPLSDKDRIFTNVHGFQDWGVDAAMKRGDWDNTKKLMEIGQDAIIDTIKA 61
Query: 106 SGLRGRGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
S LRGRGGAGFP+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG
Sbjct: 62 SNLRGRGGAGFPTGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEG 121
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
LIAG MRA AAYIYIRGE++ E K L A ++AY G +GKNACGSGYDFDV +H GA
Sbjct: 122 ALIAGFAMRARAAYIYIRGEFIYEAKVLFAAVEQAYEKGFIGKNACGSGYDFDVFVHRGA 181
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEETA +ES+EGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG W
Sbjct: 182 GAYICGEETAQIESIEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGAAW 241
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
F FGR+NN GTKLF +SGHVNKPC VEE MSIP +ELIDRHCGG+RGGWDNLLAVIPGG
Sbjct: 242 FNGFGRENNRGTKLFQISGHVNKPCVVEESMSIPFRELIDRHCGGIRGGWDNLLAVIPGG 301
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SSVPL+P D MD+D L+A+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQ
Sbjct: 302 SSVPLVPAKEIMDAPMDFDGLRALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQ 361
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREGTGW+W +MERL+ G+A EIDML +VTKQ+EGHTICALGDAAAWP+QGLIRH
Sbjct: 362 CTPCREGTGWMWRVMERLRTGDADQSEIDMLFQVTKQVEGHTICALGDAAAWPIQGLIRH 421
Query: 465 FRPELERRIKEH 476
FRPE+ERRI E+
Sbjct: 422 FRPEIERRINEN 433
>gi|340053504|emb|CCC47796.1| putative NADH-ubiquinone oxidoreductase, mitochondrial [Trypanosoma
vivax Y486]
Length = 490
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/432 (73%), Positives = 362/432 (83%), Gaps = 2/432 (0%)
Query: 48 PPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSG 107
PP KTH GGL D+DRIF NLY + A +RGDW+RT+DL+LKG DW++NE+K SG
Sbjct: 20 PPAAKTH-GGLSDKDRIFVNLYNDFGVDIASAERRGDWYRTRDLLLKGHDWVINEIKASG 78
Query: 108 LRGRGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
LRGRGGAGFPSGLKWSFMPKV DGRPSYLVVN DESEPGTCKDREIMRH+PHKL+EG L
Sbjct: 79 LRGRGGAGFPSGLKWSFMPKVKPDGRPSYLVVNGDESEPGTCKDREIMRHEPHKLVEGAL 138
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
IAG MRA YIYIRGE+ NE + +E A +EAYA G LG+NAC SGYDFD++ + GAGA
Sbjct: 139 IAGFAMRARCGYIYIRGEFYNEWRAVENAIKEAYAKGYLGRNACNSGYDFDLYTYRGAGA 198
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETA++ S+EG GKPRLKPPFPAN GLYGCPTTVTNVETVAVSPTILRRGP WF+
Sbjct: 199 YICGEETAMISSIEGGPGKPRLKPPFPANVGLYGCPTTVTNVETVAVSPTILRRGPQWFS 258
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGRKNN+G KLFC+ GHVN+PCTVEEEMSIPL++LI+RH GGVRGGWDNLLAVIPGGSS
Sbjct: 259 SFGRKNNAGVKLFCICGHVNRPCTVEEEMSIPLRDLIERHAGGVRGGWDNLLAVIPGGSS 318
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P++PK ICD VLMD+DALK VQ+GLGTAAVIVMDKSTDV+ AI RLS FY HESCGQCT
Sbjct: 319 CPMIPKDICDTVLMDFDALKEVQTGLGTAAVIVMDKSTDVIAAIHRLSMFYAHESCGQCT 378
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREG+ WL +M+R GNAK EEI + +V+KQ+EG TICAL AAAWPVQGL RHF
Sbjct: 379 PCREGSPWLEKMMQRFVHGNAKKEEIGTMLDVSKQLEGRTICALATAAAWPVQGLARHFT 438
Query: 467 PELERRIKEHAE 478
P LE RI+ + E
Sbjct: 439 PVLEERIERYWE 450
>gi|340374918|ref|XP_003385984.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Amphimedon queenslandica]
Length = 462
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/426 (75%), Positives = 361/426 (84%), Gaps = 2/426 (0%)
Query: 53 THFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRG 112
T +G LKD+DRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWIV E+K+SGLRGRG
Sbjct: 28 TSYGNLKDQDRIFTNLYGRHDWKLKGALSRGDWYKTKEIILKGRDWIVKEIKESGLRGRG 87
Query: 113 GAGFPSGLKWSFMP--KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
GAGFP+GLKW FMP D RPSYLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG
Sbjct: 88 GAGFPTGLKWGFMPPDDKKDDRPSYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVAGR 147
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A AAYIYIRGE+ NE N++ A EAY AGL+G+NACGSGYDFDV++H GAGAYICG
Sbjct: 148 AMGARAAYIYIRGEFYNEASNMQHAILEAYEAGLIGRNACGSGYDFDVYMHRGAGAYICG 207
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ESLEGKQGKPRLKPPFPA G++GCPTTV NVETVAV+P I RRG WFASFGR
Sbjct: 208 EETALIESLEGKQGKPRLKPPFPAAIGVFGCPTTVANVETVAVAPIICRRGGSWFASFGR 267
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ N GTKLF +SGHVN PCTVEEEMS+PLK+LI+RH GGVRGGWDNLLAVIPGGSS PL+
Sbjct: 268 ERNRGTKLFNISGHVNNPCTVEEEMSVPLKDLIERHAGGVRGGWDNLLAVIPGGSSTPLI 327
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +CD VLMD+DAL S L TAAVIVMDKS DVV +IARL FYKHESCGQCTPCRE
Sbjct: 328 PKSVCDTVLMDFDALVEEHSALXTAAVIVMDKSADVVRSIARLIEFYKHESCGQCTPCRE 387
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
GTGW+ IM R G AK EIDMLQE++KQIEGHTICALGD AAWPVQGLIRHFRPELE
Sbjct: 388 GTGWMTSIMYRFVEGKAKPSEIDMLQELSKQIEGHTICALGDGAAWPVQGLIRHFRPELE 447
Query: 471 RRIKEH 476
R+ ++
Sbjct: 448 SRMAQY 453
>gi|328543691|ref|YP_004303800.1| NADH dehydrogenase I subunit F transmembrane protein [Polymorphum
gilvum SL003B-26A1]
gi|326413435|gb|ADZ70498.1| Nadh dehydrogenase i chain f transmembrane protein [Polymorphum
gilvum SL003B-26A1]
Length = 433
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/422 (73%), Positives = 362/422 (85%), Gaps = 1/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YG+HD L+GA KRG W TK L+ KG DWIV E+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGLHDWGLEGARKRGHWDNTKALIDKGRDWIVEEMKSSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREI+RHDPH L+EGCL+AG M A AA
Sbjct: 62 TGLKWSFMPKASDGRPAYLVVNADESEPGTCKDREILRHDPHTLVEGCLVAGFAMGAIAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A +AY AGL+G+N +GYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIRERERLQAAIDQAYDAGLIGRNN-KNGYDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGGAWFAGLGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN+PCTVEEE+ IP +ELIDRHCGG+RGGWDNLLAVIPGGSSVP L D
Sbjct: 241 LFCISGHVNRPCTVEEELGIPFRELIDRHCGGIRGGWDNLLAVIPGGSSVPCLTADQVKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D L+ + SGLGTAAVIVMDKSTD++ AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 VPMDFDTLRGLGSGLGTAAVIVMDKSTDIIKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M+R+ GNA EEIDML VTKQ+EGHTICALGDAAAWP+QGLI++FR +E RI ++
Sbjct: 361 VMDRMVQGNASKEEIDMLFTVTKQVEGHTICALGDAAAWPIQGLIKNFRHVIEERIDDYV 420
Query: 478 ER 479
+
Sbjct: 421 AK 422
>gi|342180848|emb|CCC90323.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 496
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/453 (71%), Positives = 372/453 (82%), Gaps = 4/453 (0%)
Query: 25 VGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGD 84
VGL S S A++ Q PPP P + H GGLKD+DRIF NLY + A +RGD
Sbjct: 5 VGLLSSSGGVILQAASSQHQPPPAP--RVH-GGLKDQDRIFANLYQDFGTDIASAERRGD 61
Query: 85 WHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADES 143
W+RT+DL+LKG DWI+NE+K SGLRGRGGAGFPSGLKWSFMPK DGRPSYLVVN DES
Sbjct: 62 WYRTRDLLLKGHDWIINEIKASGLRGRGGAGFPSGLKWSFMPKSKPDGRPSYLVVNGDES 121
Query: 144 EPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAG 203
EPGTCKDREIMRH+PHKL+EG LIAG MRA YIYIRGE+ NE ++++RA +EAYA G
Sbjct: 122 EPGTCKDREIMRHEPHKLVEGALIAGFAMRARYGYIYIRGEFYNEWRSVDRAIKEAYARG 181
Query: 204 LLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPT 263
LG+NACGSGYDFD++ + GAGAYICGEETA++ S+EG GKPRLKPPFPAN GLYGCPT
Sbjct: 182 YLGRNACGSGYDFDLYTYCGAGAYICGEETAMISSIEGGPGKPRLKPPFPANVGLYGCPT 241
Query: 264 TVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI 323
TVTNVETV+VSPTILRRGP WF+SFGR+NN+G KLFC+ GHVN+PCTVEEEMSIPL++LI
Sbjct: 242 TVTNVETVSVSPTILRRGPAWFSSFGRRNNAGVKLFCICGHVNRPCTVEEEMSIPLRDLI 301
Query: 324 DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS 383
+RH GGVRGGWDNLLAVIPGGSS PL+PK ICD VLMD+DALK +GLGTAAVIVMDKS
Sbjct: 302 ERHAGGVRGGWDNLLAVIPGGSSCPLIPKSICDTVLMDFDALKEALTGLGTAAVIVMDKS 361
Query: 384 TDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE 443
TD++ AI RLS FY HESCGQCTPCREG+ WL +M R GNA++EEI + +V+KQ+E
Sbjct: 362 TDLIAAIHRLSMFYAHESCGQCTPCREGSPWLEKMMHRFVHGNARMEEIGTMLDVSKQLE 421
Query: 444 GHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
G TICAL AAAWPVQGL RHF P LE RI+ H
Sbjct: 422 GRTICALATAAAWPVQGLARHFTPLLEERIERH 454
>gi|149184631|ref|ZP_01862949.1| NADH-ubiquinone dehydrogenase chain F 1 [Erythrobacter sp. SD-21]
gi|148831951|gb|EDL50384.1| NADH-ubiquinone dehydrogenase chain F 1 [Erythrobacter sp. SD-21]
Length = 430
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 359/420 (85%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG + LK A RGDW TK L+ +G D I+ EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNLYGFQNWGLKAAEARGDWDDTKSLIARGHDNIIEEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L++G MRA A
Sbjct: 62 TGLKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALVSGYAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L+ A EAY AGL+GKNA SGYDFDV +H GAGAYICGEETA++
Sbjct: 122 AYIYIRGEYIREAEVLQAAIDEAYDAGLIGKNASKSGYDFDVFLHRGAGAYICGEETAMI 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRRG WF+SFGR+NN GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGASWFSSFGRENNKGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE +SIP ELI++HCGG+ GG DNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVNKPCVVEEALSIPFSELIEKHCGGITGGKDNLLAVIPGGSSVPLVPAEQIW 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LK + SGLGTA VIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 DAPMDFDGLKDLGSGLGTAGVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G+A +EEIDMLQ+VTKQ+EGHTICALGDAAAWP+QGLIRHFRPELERRI+EH
Sbjct: 362 RMMERLRTGDAAIEEIDMLQQVTKQVEGHTICALGDAAAWPIQGLIRHFRPELERRIEEH 421
>gi|357977050|ref|ZP_09141021.1| NADH dehydrogenase I subunit F [Sphingomonas sp. KC8]
Length = 435
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/430 (72%), Positives = 357/430 (83%), Gaps = 1/430 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNL+G + AMKRGDW T+DL+ +G D I+ E+K S LRGRGGAGFP
Sbjct: 5 LADKDRIFTNLHGFQPWNIDAAMKRGDWDNTRDLLARGQDAIIEEIKASALRGRGGAGFP 64
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG MRA A
Sbjct: 65 TGMKWSFMPKESKDGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALVAGYAMRARA 124
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE++ E + L A EAYA G LGKNACGSGYDFDV +H GAGAYICGEETA +
Sbjct: 125 AYIYIRGEFIREAETLFAAVAEAYAKGFLGKNACGSGYDFDVFVHRGAGAYICGEETAQI 184
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ES+EGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG WF+S GR+NN GT
Sbjct: 185 ESIEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVTPTILRRGASWFSSIGRENNKGT 244
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE M I +ELIDRH GG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 245 KLFQISGHVNKPCVVEEAMGISFRELIDRHAGGIRGGWDNLLAVIPGGSSVPLVPAREIM 304
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D L+A+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 305 DAPMDFDGLRALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 364
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ GNA L EIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI E
Sbjct: 365 RVMERLREGNADLSEIDMLHDVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRILEK 424
Query: 477 AERELLEATA 486
L A
Sbjct: 425 QGSATLAVAA 434
>gi|331226611|ref|XP_003325975.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
[Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309304965|gb|EFP81556.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
[Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 511
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/455 (69%), Positives = 371/455 (81%), Gaps = 12/455 (2%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRG 83
S LRSF+T S P P ++H GGLKD+DRIF N Y HD L+GA RG
Sbjct: 24 SAKLRSFATVSNSV--------PTNTPSRSH-GGLKDQDRIFQNAYMKHDHLLQGAQARG 74
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNA 140
DWH+TKD++LKG ++I+ E+K+SGLRGRGGAGFPSGLKWSFM K D RP YLVVNA
Sbjct: 75 DWHKTKDIILKGHEFIIKEIKESGLRGRGGAGFPSGLKWSFMNKPGFEKDPRPRYLVVNA 134
Query: 141 DESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAY 200
DE EPGTCKDREIMR DPHKL+EGCL+AG M ASAAYIYIRGE++ E +L+ A EAY
Sbjct: 135 DEGEPGTCKDREIMRGDPHKLVEGCLVAGRAMNASAAYIYIRGEFIMEAHHLQAAIDEAY 194
Query: 201 AAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYG 260
AGL+GKNAC SGYDFDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+G
Sbjct: 195 KAGLIGKNACNSGYDFDVYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGLFG 254
Query: 261 CPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLK 320
CPTTV NVETVAV+PTI+RRG WF SFGR+ NSGTKLFC+SGHVN PC VEEEMSIPL+
Sbjct: 255 CPTTVANVETVAVAPTIIRRGASWFNSFGRERNSGTKLFCISGHVNNPCVVEEEMSIPLR 314
Query: 321 ELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVM 380
+LID+HCGGV GGWDNLL ++PGGSSVP+L K C++ LMD+D+LK + SGLGT AVIVM
Sbjct: 315 DLIDKHCGGVIGGWDNLLGIVPGGSSVPVLTKPECEEALMDFDSLKDLYSGLGTGAVIVM 374
Query: 381 DKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTK 440
+KSTD+V AIAR + FYKHESCGQCTPCREGT W+ +M+R VG A EIDML E+T+
Sbjct: 375 NKSTDIVAAIARFAKFYKHESCGQCTPCREGTTWMEKMMDRFVVGRAHEREIDMLWELTR 434
Query: 441 QIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
QIE HTICALGDAAAWP+QGL+R F+PE+E RI++
Sbjct: 435 QIENHTICALGDAAAWPIQGLLRKFKPEIEARIQD 469
>gi|388855078|emb|CCF51209.1| probable NADH2 dehydrogenase (ubiquinone) flavoprotein 1 [Ustilago
hordei]
Length = 512
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/474 (67%), Positives = 376/474 (79%), Gaps = 20/474 (4%)
Query: 9 SLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNL 68
SL A+ V C + + GL A+ TP FGGL+D+DRIF N
Sbjct: 19 SLNNAAKVACATPSQARGL-------ATVTDTPV----------RSFGGLRDQDRIFQNA 61
Query: 69 YGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK- 127
Y H+ LKGA RGDWHRTKD++LKG DWI++++K+SG+RGRGGAGFPSGLKWSFM K
Sbjct: 62 YMRHEHGLKGAKARGDWHRTKDILLKGHDWIISQMKESGMRGRGGAGFPSGLKWSFMNKP 121
Query: 128 --VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEY 185
D RP YLV+NADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIY+RGE+
Sbjct: 122 GWEKDPRPRYLVINADEGEPGTCKDREIMRGDPHKLIEGCLVAGRAMNANAAYIYVRGEF 181
Query: 186 VNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGK 245
E +L+ A +EAY AGL+GKNACGSGYDFDV++H GAGAYICGEETAL+ESLEGKQGK
Sbjct: 182 YLEVAHLQHAIKEAYDAGLIGKNACGSGYDFDVYVHKGAGAYICGEETALIESLEGKQGK 241
Query: 246 PRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHV 305
PRLKPPFPA+ G++GCPTTV NVETVA +PTI+RRGP WFA FGR N GTKLF +SGHV
Sbjct: 242 PRLKPPFPADVGVFGCPTTVANVETVAAAPTIIRRGPAWFAGFGRDKNQGTKLFAISGHV 301
Query: 306 NKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDAL 365
N PC VEEEMSIPLKELI+RHCGGVRGGWDNLL ++PGGSSVP+LPKH C++VLMD+D+L
Sbjct: 302 NTPCVVEEEMSIPLKELIERHCGGVRGGWDNLLGIVPGGSSVPILPKHKCEEVLMDFDSL 361
Query: 366 KAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVG 425
+ QS LGT AVIVMDK+TDVV AI+R + FYKHESCGQCTPCREGT WL +MER + G
Sbjct: 362 RENQSSLGTGAVIVMDKTTDVVQAISRFAKFYKHESCGQCTPCREGTTWLANMMERFEEG 421
Query: 426 NAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
EIDM+ E+TKQ+EGHTICAL DAAAWP+QGL+R FRPE+E R++ + E+
Sbjct: 422 RGNNREIDMIYELTKQMEGHTICALADAAAWPIQGLLRWFRPEIEERMRLYQEK 475
>gi|353235351|emb|CCA67365.1| probable NADH2 dehydrogenase (ubiquinone) flavoprotein 1
[Piriformospora indica DSM 11827]
Length = 539
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/425 (73%), Positives = 358/425 (84%), Gaps = 3/425 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
+GGL+D+DRIFTN Y HD +KGA RGDWHRTKD++LKG +WI+ +K SGLRGRGG
Sbjct: 66 RYGGLRDQDRIFTNAYCRHDHGIKGAKSRGDWHRTKDILLKGDNWIIQTIKDSGLRGRGG 125
Query: 114 AGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
AGFPSGLKWSFM K +D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 126 AGFPSGLKWSFMNKPNWQADKRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGR 185
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A+AAYIYIRGE+ E + +++A EAY GL+GKNACGSGYDFD+++H GAGAYICG
Sbjct: 186 AMNANAAYIYIRGEFYLEAQRVQQAIDEAYKEGLIGKNACGSGYDFDIYVHRGAGAYICG 245
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ES+EGKQGKPRLKPPFPA+ GL+GCP+TV NVETVAV+PTI RRG WFASFGR
Sbjct: 246 EETALIESIEGKQGKPRLKPPFPADVGLFGCPSTVANVETVAVAPTICRRGAPWFASFGR 305
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ N GTKLFC+SGHVN PC VEEEMSIPLK+LI++HCGGV GGWDNLL ++PGGSSVP+L
Sbjct: 306 ERNQGTKLFCISGHVNNPCVVEEEMSIPLKDLIEKHCGGVIGGWDNLLGIVPGGSSVPIL 365
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
P + C +VLMDYD+LK QSGLGT AVIVM+KSTDVV AIAR S FYKHESCGQCTPCRE
Sbjct: 366 PINKCSEVLMDYDSLKDAQSGLGTGAVIVMNKSTDVVAAIARFSKFYKHESCGQCTPCRE 425
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
GT W+ +M RL G A EIDML E+TKQ+EG TICALGDAAAWP+QGL+RHFRPE+E
Sbjct: 426 GTTWMMNMMNRLVEGQAHQREIDMLLEITKQVEGRTICALGDAAAWPIQGLMRHFRPEVE 485
Query: 471 RRIKE 475
RI E
Sbjct: 486 ARIAE 490
>gi|392559122|gb|EIW52307.1| NADH-ubiquinone oxidoreductase [Trametes versicolor FP-101664 SS1]
Length = 497
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/422 (74%), Positives = 354/422 (83%), Gaps = 3/422 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIFTN Y HD +KGAM RGDWH+TKD++LKG WI+ +K SGLRGRGGA
Sbjct: 34 YGGLKDQDRIFTNAYCRHDHGVKGAMSRGDWHKTKDILLKGDSWIIQTIKDSGLRGRGGA 93
Query: 115 GFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 94 GFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGRA 153
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M ASAAYIYIRGE+ E ++++A EAY G LGK+ACGSGY FDV++H GAGAYICGE
Sbjct: 154 MNASAAYIYIRGEFYQEASHVQQAINEAYKNGFLGKDACGSGYSFDVYLHRGAGAYICGE 213
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI+RRG WFA FGR
Sbjct: 214 ETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTIVRRGAAWFAGFGRA 273
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PC VEEEMSIPLKELI++HCGGVRGGWDNLL +IPGGSSVP+LP
Sbjct: 274 RNQGTKLFCISGHVNNPCVVEEEMSIPLKELIEKHCGGVRGGWDNLLGIIPGGSSVPVLP 333
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
C +VLMDYD+LK QSGLGT AVIVMDKSTD+V AIAR ++FYKHESCGQCTPCREG
Sbjct: 334 IDKCGEVLMDYDSLKDAQSGLGTGAVIVMDKSTDIVKAIARFAHFYKHESCGQCTPCREG 393
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
T W+ +M+R G EIDML E+TKQIEG TICALGDAAAWP+QGL+RHFRPE+E+
Sbjct: 394 TTWMMNMMDRFAEGRGHQREIDMLLELTKQIEGRTICALGDAAAWPIQGLMRHFRPEVEQ 453
Query: 472 RI 473
RI
Sbjct: 454 RI 455
>gi|261327930|emb|CBH10907.1| NADH-ubiquinone oxidoreductase, mitochondrial,putative [Trypanosoma
brucei gambiense DAL972]
Length = 496
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/450 (69%), Positives = 370/450 (82%), Gaps = 2/450 (0%)
Query: 30 FSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTK 89
S G+ + PPP ++ H GGLKD+DRIF NLY + A +RGDW+RT+
Sbjct: 8 LSATGSLLQAAASQPPPTQQEQRVH-GGLKDQDRIFVNLYQDFGTDIDSAERRGDWYRTR 66
Query: 90 DLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTC 148
DL+LKG DW++NE+K SGLRGRGGAGFPSGLKWSFMPK DGRPSY+VVN DESEPGTC
Sbjct: 67 DLLLKGHDWVINEIKASGLRGRGGAGFPSGLKWSFMPKSKPDGRPSYIVVNGDESEPGTC 126
Query: 149 KDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKN 208
KDREIMRH+PHKL+EG LIAG MRA YIYIRGE+ NE + +++A +EAYA G LG+N
Sbjct: 127 KDREIMRHEPHKLVEGALIAGFAMRARYGYIYIRGEFYNEWRAVDQAIKEAYARGYLGRN 186
Query: 209 ACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNV 268
ACGSGYDFD++ + GAGAYICGEETA++ S+EG GKPRLKPPFPAN GLYGCPTTVTNV
Sbjct: 187 ACGSGYDFDLYTYCGAGAYICGEETAMISSIEGGPGKPRLKPPFPANVGLYGCPTTVTNV 246
Query: 269 ETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCG 328
ETV+VSPTILRRGP WF SFGR+NN+G KLFC+ GHVN+PCTVEEEMSIPL++LI+RH G
Sbjct: 247 ETVSVSPTILRRGPSWFNSFGRRNNAGVKLFCICGHVNRPCTVEEEMSIPLRDLIERHAG 306
Query: 329 GVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVD 388
GVRGGWDNLLAVIPGGSS PL+PK ICD+VLMD+DALK Q+GLGTAAVIVMDKSTD++
Sbjct: 307 GVRGGWDNLLAVIPGGSSCPLIPKSICDNVLMDFDALKEAQTGLGTAAVIVMDKSTDLIA 366
Query: 389 AIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTIC 448
AI RLS FY HESCGQCTPCREG+ WL +M+R GNA++EE+ + +V+KQ+EG TIC
Sbjct: 367 AIHRLSMFYAHESCGQCTPCREGSPWLEKMMQRFVHGNARMEEVGTMLDVSKQLEGRTIC 426
Query: 449 ALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
AL AAAWPVQGL RHF P LE RI+++ E
Sbjct: 427 ALATAAAWPVQGLARHFTPLLEERIEKYWE 456
>gi|189191100|ref|XP_001931889.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973495|gb|EDU40994.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 500
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/437 (71%), Positives = 365/437 (83%), Gaps = 4/437 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P++T +GGLKD+DRIF NLYG H LK A K GDW++TK+++LKG +WI++E+K SGLR
Sbjct: 50 PKRT-YGGLKDQDRIFQNLYGHHGADLKSAQKYGDWYKTKEILLKGHEWIISEIKASGLR 108
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFPSGLKW + D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 109 GRGGAGFPSGLKWDWD---KDSKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVAG 165
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACGSGYDFDV++H G GAY+C
Sbjct: 166 RAMNATAAYIYIRGEFYHEATVLQRAIQEAYQAGLIGKNACGSGYDFDVYLHRGMGAYVC 225
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG WFA FG
Sbjct: 226 GEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGSWFAGFG 285
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ N GTKL+ +SGHVN+PC VEEEMSIPL++LI++HCGGVRGGWDNL AVIPGGSS P+
Sbjct: 286 RERNQGTKLYAISGHVNRPCVVEEEMSIPLRDLIEKHCGGVRGGWDNLKAVIPGGSSTPI 345
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
LPKHICDD LMD+DALK QSG GTAAVIVMDKSTDVV AI RL+ FY HESCGQCTPCR
Sbjct: 346 LPKHICDDQLMDFDALKDSQSGFGTAAVIVMDKSTDVVRAITRLAKFYHHESCGQCTPCR 405
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ W IM+R G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPEL
Sbjct: 406 EGSKWTHQIMDRFYKGQAREREIDMLQELTKQVEGHTICALGEAFAWPLQGLIRHFRPEL 465
Query: 470 ERRIKEHAERELLEATA 486
E RIK++ + EA A
Sbjct: 466 EARIKDYGLKNGGEALA 482
>gi|402827195|ref|ZP_10876298.1| NADH dehydrogenase I subunit F [Sphingomonas sp. LH128]
gi|402259295|gb|EJU09555.1| NADH dehydrogenase I subunit F [Sphingomonas sp. LH128]
Length = 436
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/423 (74%), Positives = 361/423 (85%), Gaps = 6/423 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG LK A RG W+ TKDL+ +G D I++E+K SGLRGRGGAGFP
Sbjct: 3 LLDKDRIFTNLYGFQPWNLKEAQARGAWNNTKDLIARGRDAIIDEMKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKV------SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
+G+KWSFMPK + +PS+LV+NADESEPG+CKDREIMRHDPH L EG L+AG
Sbjct: 63 TGMKWSFMPKQPPLDQNGNPKPSFLVINADESEPGSCKDREIMRHDPHLLFEGALVAGFA 122
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGEY+ E + L AR+EAYAAGLLGKNA GSGYDFDV +H GAGAYICGE
Sbjct: 123 MGARAAYIYIRGEYIREAEVLFAAREEAYAAGLLGKNAAGSGYDFDVFVHRGAGAYICGE 182
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETA++ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+SFGR+
Sbjct: 183 ETAMIESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGASWFSSFGRE 242
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NN GTKLF +SGHVN+PC VEEEMSIP ELI+RHCGG+RGG DNLLAVIPGGSSVPL+P
Sbjct: 243 NNKGTKLFQISGHVNRPCVVEEEMSIPFSELIERHCGGIRGGRDNLLAVIPGGSSVPLVP 302
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
D MD+D LKAV SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREG
Sbjct: 303 SADIWDAPMDFDGLKAVGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREG 362
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
TGW+W +MERL+ G+A +EEIDMLQ+VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+ER
Sbjct: 363 TGWMWRVMERLRTGDAHVEEIDMLQQVTKQVEGHTICALGDAAAWPIQGLIKHFRPEIER 422
Query: 472 RIK 474
RI+
Sbjct: 423 RIE 425
>gi|114707373|ref|ZP_01440270.1| NADH-ubiquinone oxidoreductase chain F protein [Fulvimarina pelagi
HTCC2506]
gi|114537254|gb|EAU40381.1| NADH-ubiquinone oxidoreductase chain F protein [Fulvimarina pelagi
HTCC2506]
Length = 434
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/427 (73%), Positives = 361/427 (84%), Gaps = 3/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AMKRG + TK++V KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLRDKSLKAAMKRGHFDGTKEIVEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK S GRP YLVVNADESEPGTCKDREIMR+DP L+EGCLIAG M A A
Sbjct: 62 TGLKWSFMPKESAGRPHYLVVNADESEPGTCKDREIMRNDPFTLIEGCLIAGFAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLG-KNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIYIRGEY+ ER+ L++A E Y GLLG N CG +DFD+ +H+GAGAYICGEETALL
Sbjct: 122 YIYIRGEYIREREALQKAVDECYEEGLLGADNKCG--WDFDIVVHHGAGAYICGEETALL 179
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR+NN+GT
Sbjct: 180 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAGWFAGIGRENNTGT 239
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PCTVEE MSI +ELID+HCGGVRGGWDNLLAVIPGGSSVPL+P
Sbjct: 240 KLFCISGHVEQPCTVEEAMSISFRELIDKHCGGVRGGWDNLLAVIPGGSSVPLVPAKDII 299
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LK +++ LGTAAVIVMDKSTD+V AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 300 DAPMDFDGLKDIKTSLGTAAVIVMDKSTDIVKAIARISYFYKHESCGQCTPCREGTGWMW 359
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ VGNAK EIDML +VTKQ+EGHTICALGDAAAWP+QGL+RHFRPE+ERRI E
Sbjct: 360 RVMERMVVGNAKKSEIDMLLQVTKQVEGHTICALGDAAAWPIQGLMRHFRPEIERRIDEF 419
Query: 477 AERELLE 483
+ L+
Sbjct: 420 SRNADLD 426
>gi|54792418|emb|CAH65683.1| NADH-quinone oxidoreductase [Nilaparvata lugens]
Length = 462
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/425 (73%), Positives = 358/425 (84%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P KT +G L D DRIFTNLYG HD LKGA+KRGDW++TK++VLKGAD+I+NEVK SGLR
Sbjct: 35 PTKTKYGPLNDSDRIFTNLYGRHDWRLKGALKRGDWYKTKEIVLKGADFIINEVKASGLR 94
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFPSGLKWSFM K SDGRP YL VNADE EPGTCKDREIMRHDPHKL+EGCLIAG
Sbjct: 95 GRGGAGFPSGLKWSFMNKPSDGRPKYLCVNADEGEPGTCKDREIMRHDPHKLVEGCLIAG 154
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE N++ A EAY AGL+GKNACG+G+DFDV++H GAGAYIC
Sbjct: 155 RAMGAQAAYIYIRGEFYNEASNMQVAISEAYQAGLIGKNACGTGFDFDVYMHRGAGAYIC 214
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PTI RRG WFASFG
Sbjct: 215 GEETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVTNVETVAVAPTICRRGGAWFASFG 274
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R N+GTKLF +SGHVN+PCTVEEEMS+PL+ELI+RH GGVRGGWDNLLAVIPGGSS PL
Sbjct: 275 RPRNTGTKLFNISGHVNRPCTVEEEMSVPLRELIERHAGGVRGGWDNLLAVIPGGSSTPL 334
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +CDDVLMD+DAL A ++ GTAAVIVMDKSTD++ AIARL FYKHESCGQCTPCR
Sbjct: 335 IPKRVCDDVLMDFDALIAAETSFGTAAVIVMDKSTDIIKAIARLIVFYKHESCGQCTPCR 394
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M+R G+A+ EIDML E++K++ WPVQGLIRHFRPE+
Sbjct: 395 EGIAWMHKMMQRFVKGDARPAEIDMLWEISKRLRDTLFARWVTGLRWPVQGLIRHFRPEI 454
Query: 470 ERRIK 474
E R+K
Sbjct: 455 ENRMK 459
>gi|84686436|ref|ZP_01014330.1| NADH-quinone oxidoreductase, F subunit [Maritimibacter alkaliphilus
HTCC2654]
gi|84665619|gb|EAQ12095.1| NADH-quinone oxidoreductase, F subunit [Rhodobacterales bacterium
HTCC2654]
Length = 433
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/430 (73%), Positives = 359/430 (83%), Gaps = 1/430 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMHD LKGA RG W T ++ KG DWIV+++K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHDRTLKGAQMRGHWDGTAGIIQKGRDWIVDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGLLGKNA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYDAGLLGKNAAGSGWDFDLYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WFASFGRKNN GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFASFGRKNNEGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PC VEE MSI +ELI+ HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAVSGHVNNPCVVEEAMSISFEELIETHCGGIRGGWDNLLAVIPGGSSVPCVRGEKMKD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDKSTD+V AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AVMDFDYLRGELGSGLGTAAVIVMDKSTDIVKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGEAELEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIKAQ 421
Query: 477 AERELLEATA 486
+ A A
Sbjct: 422 KSGRISAAVA 431
>gi|115647097|ref|XP_001178525.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 471
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/430 (74%), Positives = 364/430 (84%), Gaps = 1/430 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYG HD LKGAM RGDW++TK+++LKG DWI+ E++ SGLRGRGGAGFP
Sbjct: 42 LKDEDRIFTNLYGRHDWKLKGAMARGDWYKTKEILLKGHDWILKEIRDSGLRGRGGAGFP 101
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KW FM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG M A AA
Sbjct: 102 TGMKWGFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVAGRAMGARAA 161
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++ A +EAY AG LGKNACGSGYDFDV++H GAGAYICGEETA++E
Sbjct: 162 YIYIRGEFYNEASNMQLAIKEAYEAGYLGKNACGSGYDFDVYMHRGAGAYICGEETAVIE 221
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+P I RRG WFA FGR+ N GTK
Sbjct: 222 SLEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPIICRRGAPWFAGFGRERNQGTK 281
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SG+VN PCTVEE MSIPLK LI++H GGV GGWDNLLAVIPGGSS P++PK +CDD
Sbjct: 282 LFNISGNVNTPCTVEESMSIPLKVLIEKHAGGVEGGWDNLLAVIPGGSSTPMIPKDVCDD 341
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL A Q+GLGTAAVIVM+K DV+ IARL FY+HESCGQCTPCREGTGW+
Sbjct: 342 VLMDFDALVAAQTGLGTAAVIVMNKQADVIRCIARLMEFYQHESCGQCTPCREGTGWMTK 401
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE-H 476
I R GNAK +EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R+K+ H
Sbjct: 402 ITNRFVEGNAKPDEIDMLYELSKQIEGHTICALGDGAAWPVQGLIRHFRPELEARMKKFH 461
Query: 477 AERELLEATA 486
++ ATA
Sbjct: 462 EGKQKASATA 471
>gi|307174607|gb|EFN65028.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Camponotus floridanus]
Length = 468
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/464 (68%), Positives = 370/464 (79%), Gaps = 4/464 (0%)
Query: 13 ASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMH 72
+ +VRC L + R G+S +S + P K L DEDR+FTNLYG H
Sbjct: 3 SGIVRC----LQISRRQLGLLGSSLSSQQRTFADAAPEGKKQGSPLSDEDRVFTNLYGRH 58
Query: 73 DPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
D LKGAM RGDW++TK+++ KG+DWI+NE+K SGLRGRGGAGFPSG+KWSFM K +DGR
Sbjct: 59 DWRLKGAMSRGDWYKTKEILDKGSDWIINEIKISGLRGRGGAGFPSGMKWSFMNKPADGR 118
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLV+N DE EPGTCKDREI+RHDPHKL+EGCLIAG M A AAYIYIRGE+ NE N+
Sbjct: 119 PKYLVINGDEGEPGTCKDREILRHDPHKLVEGCLIAGRAMGACAAYIYIRGEFYNEASNM 178
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAY AGL+GKN+CGSGYDFD+ I GAGAYICGEETAL+ES+EGKQGKPRLKPPF
Sbjct: 179 QVAVAEAYQAGLIGKNSCGSGYDFDIFIVRGAGAYICGEETALIESIEGKQGKPRLKPPF 238
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ G++GCPTTVTNVETVAV+PTI RRG WFASFGR N GTKLF +SGHVN PCTVE
Sbjct: 239 PADVGVFGCPTTVTNVETVAVAPTICRRGGAWFASFGRPRNHGTKLFNISGHVNNPCTVE 298
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPL+ELIDRH GGV GGWDNLL VIPGGSS P++PK CD VL+D+D L VQS
Sbjct: 299 EEMSIPLRELIDRHAGGVIGGWDNLLGVIPGGSSTPVIPKSACDTVLLDFDDLIRVQSSF 358
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVM+K TD++ AI RL FYKHESCGQCTPCREG W++ I++R GNA++ EI
Sbjct: 359 GTAAVIVMNKQTDIIKAITRLISFYKHESCGQCTPCREGISWMFKILKRFVDGNAEVHEI 418
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
DML E+TKQIE HTICAL D AAWPVQGLIRHFRPE+E R+KE
Sbjct: 419 DMLWELTKQIELHTICALADGAAWPVQGLIRHFRPEIEARLKEQ 462
>gi|72087543|ref|XP_791098.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 471
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/430 (74%), Positives = 364/430 (84%), Gaps = 1/430 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYG HD LKGAM RGDW++TK+++LKG DWI+ E++ SGLRGRGGAGFP
Sbjct: 42 LKDEDRIFTNLYGRHDWKLKGAMARGDWYKTKEILLKGHDWILKEIRDSGLRGRGGAGFP 101
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KW FM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG M A AA
Sbjct: 102 TGMKWGFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVAGRAMGARAA 161
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++ A +EAY AG LGKNACGSGYDFDV++H GAGAYICGEETA++E
Sbjct: 162 YIYIRGEFYNEASNMQLAIKEAYEAGYLGKNACGSGYDFDVYMHRGAGAYICGEETAVIE 221
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+P I RRG WFA FGR+ N GTK
Sbjct: 222 SLEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPIICRRGAPWFAGFGRERNQGTK 281
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SG+VN PCTVEE MSIPLK LI++H GGV GGWDNLLAVIPGGSS P++PK +CDD
Sbjct: 282 LFNISGNVNTPCTVEESMSIPLKVLIEKHAGGVEGGWDNLLAVIPGGSSTPMIPKDVCDD 341
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL A Q+GLGTAAVIVM+K DV+ IARL FY+HESCGQCTPCREGTGW+
Sbjct: 342 VLMDFDALVAAQTGLGTAAVIVMNKQADVIRCIARLMEFYQHESCGQCTPCREGTGWMTK 401
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE-H 476
I R GNAK +EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R+K+ H
Sbjct: 402 ITNRFVEGNAKPDEIDMLYELSKQIEGHTICALGDGAAWPVQGLIRHFRPELEARMKKFH 461
Query: 477 AERELLEATA 486
++ ATA
Sbjct: 462 EGKQKASATA 471
>gi|410928570|ref|XP_003977673.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Takifugu rubripes]
Length = 471
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/469 (69%), Positives = 381/469 (81%), Gaps = 15/469 (3%)
Query: 8 LSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTN 67
L + R ++VR + RL+ G +A+ PQ +KT FG L D+DRIFTN
Sbjct: 4 LRMLRGAVVRQITPRLAYG----------SAAQPQVKQ-----KKTKFGPLSDQDRIFTN 48
Query: 68 LYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK 127
LYG HD LKGA+ RGDW++TK+++LKG+DWI+NEVK SGLRGRGGAGFP+G+KWSFM K
Sbjct: 49 LYGRHDWRLKGALTRGDWYKTKEIILKGSDWILNEVKISGLRGRGGAGFPTGMKWSFMNK 108
Query: 128 VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVN 187
+DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A AAYIYIRGE+ N
Sbjct: 109 PNDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLIAGRAMGARAAYIYIRGEFYN 168
Query: 188 ERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPR 247
E N++ A EAY A L+G++ACGSGYDFDV + GAGAYICGEETAL+ESLEGKQGKPR
Sbjct: 169 ESSNVQVAINEAYQAQLIGEDACGSGYDFDVFVMRGAGAYICGEETALIESLEGKQGKPR 228
Query: 248 LKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNK 307
LKPPFPA+ G++GCPTTV+NVETVAV+P I RRG WF+ FGR+ NSGTKLF +SGHVN
Sbjct: 229 LKPPFPADIGVFGCPTTVSNVETVAVAPEICRRGGVWFSGFGRERNSGTKLFNISGHVNF 288
Query: 308 PCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKA 367
PCTVEEEMSIPL+ELI+RH GGV+GGWDNLL VIPGGSS P++P+H+CDDVLMD+D L
Sbjct: 289 PCTVEEEMSIPLRELIERHAGGVKGGWDNLLGVIPGGSSTPIIPRHVCDDVLMDFDDLVR 348
Query: 368 VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNA 427
Q+ LGTAAVIVMDKSTDV+ AIARL FYKHESCGQCTPCREG W+ +M RL G+A
Sbjct: 349 AQTALGTAAVIVMDKSTDVIKAIARLVRFYKHESCGQCTPCREGVDWMDKMMWRLVRGDA 408
Query: 428 KLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
EIDM+ E++KQIEGHTICALGD AAWPVQGLIRHFRP +E RI ++
Sbjct: 409 VASEIDMIWELSKQIEGHTICALGDGAAWPVQGLIRHFRPVMESRIAQY 457
>gi|170578164|ref|XP_001894295.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Brugia malayi]
gi|158599191|gb|EDP36876.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor, putative [Brugia malayi]
Length = 481
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/455 (68%), Positives = 368/455 (80%), Gaps = 4/455 (0%)
Query: 25 VGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGD 84
VG+ S S +G + + + P +KT FG LKDEDRIFTNLYG +D LK AMK GD
Sbjct: 17 VGVISISVRGKTVTAQEELKKP----QKTTFGPLKDEDRIFTNLYGRYDFRLKSAMKLGD 72
Query: 85 WHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESE 144
W++TK+++LKG DWI+ E+ SG+RGRGGAGFP+G+KWSFM + DGRP YL +NADE E
Sbjct: 73 WYKTKEVLLKGQDWIIKEMSASGMRGRGGAGFPTGIKWSFMKRPFDGRPKYLCINADEGE 132
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDRE++RH PHKL+EG LIAG M A AAYIYIRGE+ NE L+ A EAY AG
Sbjct: 133 PGTCKDREVIRHHPHKLIEGALIAGYAMGARAAYIYIRGEFYNEACILQEAIHEAYKAGF 192
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
+GKN+C +GY FDV +H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTT
Sbjct: 193 IGKNSCDTGYSFDVFVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTT 252
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
V N+ET+A +P I +RG W++SFGR+ N GTKL+C+SGHV PCTVEEEMSIPLKELI+
Sbjct: 253 VNNIETIASAPAICKRGAKWYSSFGRERNHGTKLYCISGHVVNPCTVEEEMSIPLKELIE 312
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
RHCGGV GGWDNL+A+IPGGSSVP++PK IC+ VLMDYDAL AVQ+GLGTAAVIVM+K
Sbjct: 313 RHCGGVIGGWDNLMAIIPGGSSVPMIPKDICETVLMDYDALVAVQTGLGTAAVIVMNKEV 372
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+V IARLS+FY+HESCGQCTPCREGT WL +M R G AK EID L E++KQIE
Sbjct: 373 DIVKCIARLSHFYRHESCGQCTPCREGTKWLNSVMWRFVKGQAKSSEIDSLWEISKQIEA 432
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
HTICALGDAAAWPVQGLIRHFRPE+E RI E+ +
Sbjct: 433 HTICALGDAAAWPVQGLIRHFRPEIEHRISEYQAK 467
>gi|72388848|ref|XP_844719.1| NADH-ubiquinone oxidoreductase, mitochondrial [Trypanosoma brucei
TREU927]
gi|62176128|gb|AAX70246.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative
[Trypanosoma brucei]
gi|70801253|gb|AAZ11160.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 496
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/450 (69%), Positives = 370/450 (82%), Gaps = 2/450 (0%)
Query: 30 FSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTK 89
S G+ + PPP ++ H GGLKD+DRIF NLY + A +RGDW+RT+
Sbjct: 8 LSATGSLLQAAASQPPPTQQEQRVH-GGLKDQDRIFVNLYQDFGTDIDSAERRGDWYRTR 66
Query: 90 DLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTC 148
DL+LKG DW++NE+K SGLRGRGGAGFPSGLKWSFMPK DGRPSY+VVN DESEPGTC
Sbjct: 67 DLLLKGHDWVINEIKASGLRGRGGAGFPSGLKWSFMPKSKPDGRPSYIVVNGDESEPGTC 126
Query: 149 KDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKN 208
KDREIMRH+PHKL+EG LIAG MRA YIYIRGE+ NE + +++A +EAYA G LG+N
Sbjct: 127 KDREIMRHEPHKLVEGALIAGFAMRARYGYIYIRGEFYNEWRAVDQAIKEAYARGYLGRN 186
Query: 209 ACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNV 268
ACGSGYDFD++ + GAGAYICGEETA++ S+EG GKPRLKPPFPAN GLYGCPTTVTNV
Sbjct: 187 ACGSGYDFDLYTYCGAGAYICGEETAMISSIEGGPGKPRLKPPFPANVGLYGCPTTVTNV 246
Query: 269 ETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCG 328
ETV+VSPTILRRGP WF SFGR+NN+G KLFC+ GHVN+PCTVEEEMSIPL++LI+RH G
Sbjct: 247 ETVSVSPTILRRGPSWFNSFGRRNNAGVKLFCICGHVNRPCTVEEEMSIPLRDLIERHAG 306
Query: 329 GVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVD 388
GVRGGWDNLLAVIPGGSS PL+PK ICD+VLMD+DALK Q+GLGTAAVIVMDKSTD++
Sbjct: 307 GVRGGWDNLLAVIPGGSSCPLIPKSICDNVLMDFDALKEAQTGLGTAAVIVMDKSTDLIA 366
Query: 389 AIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTIC 448
AI RLS FY HESCGQCTPCREG+ WL +M+R GNA++EE+ + +V+KQ+EG TIC
Sbjct: 367 AIHRLSMFYAHESCGQCTPCREGSPWLEKMMQRFVHGNARMEEVGTMLDVSKQLEGRTIC 426
Query: 449 ALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
AL AAAWPVQGL RHF P L+ RI+++ E
Sbjct: 427 ALATAAAWPVQGLARHFTPLLQERIEKYWE 456
>gi|407856945|gb|EKG06778.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative
[Trypanosoma cruzi]
Length = 484
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/429 (73%), Positives = 364/429 (84%), Gaps = 2/429 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
EKTH GGLKD+DRIF NLY + A +RGDW+RTKD++LKG DW++ E+K SGLRG
Sbjct: 17 EKTH-GGLKDQDRIFLNLYNDFGTNIASAERRGDWYRTKDILLKGHDWVIAEMKASGLRG 75
Query: 111 RGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
RGGAGFPSGLKWSFMPKV DGRPSYLVVN DESEPGTCKDREIMRH+PHKL+EG LIAG
Sbjct: 76 RGGAGFPSGLKWSFMPKVKPDGRPSYLVVNGDESEPGTCKDREIMRHEPHKLVEGALIAG 135
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
MRA +IYIRGE+ NE +++ERA QEAYA G LG+NACGSGYDFD++ + GAGAYIC
Sbjct: 136 FAMRARYGFIYIRGEFYNEWRSVERAIQEAYAKGYLGRNACGSGYDFDLYTYRGAGAYIC 195
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETA++ SLEG GKPRLKPPFPAN GLYGCPTTVTNVETV+VSPTILRRGP WF+SFG
Sbjct: 196 GEETAMISSLEGGPGKPRLKPPFPANVGLYGCPTTVTNVETVSVSPTILRRGPQWFSSFG 255
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
RKNN+G KLFC+ GHVN+PCTVE+EMSIPL++LI+RH GGVRGGWDNLLAVIPGGSS PL
Sbjct: 256 RKNNAGVKLFCICGHVNRPCTVEDEMSIPLRDLIERHAGGVRGGWDNLLAVIPGGSSCPL 315
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK ICD+VLMDYD+LK VQ+GLGTAAVIVMDKSTD++ AI R+S FY +ESCGQCTPCR
Sbjct: 316 IPKSICDNVLMDYDSLKEVQTGLGTAAVIVMDKSTDLIAAIHRISKFYANESCGQCTPCR 375
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ WL +M R GNAK EEI + +V+KQ+EG TICAL AAAWPVQGL RHF P L
Sbjct: 376 EGSPWLEKMMRRFVHGNAKKEEIGTMLDVSKQLEGRTICALATAAAWPVQGLARHFTPML 435
Query: 470 ERRIKEHAE 478
E RI+ + E
Sbjct: 436 EERIERYWE 444
>gi|359407448|ref|ZP_09199925.1| NADH-quinone oxidoreductase, F subunit [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356677487|gb|EHI49831.1| NADH-quinone oxidoreductase, F subunit [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 428
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/419 (72%), Positives = 358/419 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG DP L GA +RGDW T ++ +G + ++ EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNLYGWGDPMLAGAKQRGDWDNTAAILARGHEDVIEEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADESEPGTCKDR+I+RH+PHKLLEGC++AG MRA AA
Sbjct: 62 TGLKWSFMPKEVGARPHYLVVNADESEPGTCKDRDIIRHEPHKLLEGCVVAGFAMRAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE K L+ A EAY AGLLG NA GSG+ FD+++H GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFYNEYKVLQSAIDEAYDAGLLGVNAAGSGWAFDIYLHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG WFA G++NN+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGGAWFAGLGKENNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEEEM IPLKELI++H GGVRGGWDNLLA+IPGGSS PL+PK +C+
Sbjct: 242 LFCISGHVNKPCNVEEEMGIPLKELIEKHAGGVRGGWDNLLAIIPGGSSTPLMPKDVCET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+DAL+A +GLGTA VIVMDKSTD+V AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 MTMDFDALRAAGTGLGTAGVIVMDKSTDIVRAIARLSYFYKHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+R+ G A++ EI L++VT+Q+EGHTICALGDAAAWP+QGLI+HFRPE+ERRI H
Sbjct: 362 MMDRMVRGEAEVHEIQTLEQVTRQVEGHTICALGDAAAWPIQGLIKHFRPEIERRIAAH 420
>gi|405967555|gb|EKC32703.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Crassostrea gigas]
Length = 466
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/435 (71%), Positives = 362/435 (83%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
K+ +G LKDEDRIFTNLYG HD LKGAM RGDW++TK+++LKG DWI+ E+ SGLRGR
Sbjct: 32 KSTYGPLKDEDRIFTNLYGRHDWKLKGAMSRGDWYKTKEIILKGHDWILKEITTSGLRGR 91
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFP+G+KW FM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG
Sbjct: 92 GGAGFPTGMKWGFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVAGRS 151
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGE+ NE NL+ A EAYAAGL+GKNACGSGYDFDV++H GAGAYICGE
Sbjct: 152 MGACAAYIYIRGEFYNEASNLQVAINEAYAAGLIGKNACGSGYDFDVYVHRGAGAYICGE 211
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ET+L+ESLEGK GKPRLKPPFPA+ G++GCPTTV NVETVAV+P I RRG +WFA FGR+
Sbjct: 212 ETSLIESLEGKAGKPRLKPPFPADVGVFGCPTTVANVETVAVAPVICRRGGEWFAGFGRE 271
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLF +SG VN P TVEEEMSI LKELI+RH GGV GGWDNLL VIPGGSS P++P
Sbjct: 272 RNRGTKLFNISGQVNNPVTVEEEMSISLKELIERHAGGVIGGWDNLLGVIPGGSSTPIIP 331
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +C DVLMD+D L Q+ LGTAAVIVM+K DV+ I+RL FYKHESCGQCTPCREG
Sbjct: 332 KSVCTDVLMDFDGLVQAQTALGTAAVIVMNKDADVIRCISRLIEFYKHESCGQCTPCREG 391
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
GW+ IM+R + GN + EIDML E++KQIEGHTICALGD AAWPVQGLIRH+RPEL
Sbjct: 392 VGWMAKIMKRFETGNFQEGEIDMLYEISKQIEGHTICALGDGAAWPVQGLIRHYRPELLE 451
Query: 472 RIKEHAERELLEATA 486
RI++ +++ +ATA
Sbjct: 452 RIEQFKQKQQKKATA 466
>gi|116202325|ref|XP_001226974.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Chaetomium globosum CBS 148.51]
gi|88177565|gb|EAQ85033.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Chaetomium globosum CBS 148.51]
Length = 495
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/459 (69%), Positives = 370/459 (80%), Gaps = 14/459 (3%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RSF+T + A+T + +GGL+D+DRIF NLYG + P LK A K GDWH+
Sbjct: 33 RSFATVQDAGAATVRT-----------YGGLRDQDRIFQNLYGRYPPDLKHAKKMGDWHK 81
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 147
TK+++LKG DWI+ EVK SGLRGRGGAGFPSGLKW + D +P YLVVNADE EPGT
Sbjct: 82 TKEIILKGHDWIIGEVKASGLRGRGGAGFPSGLKWDWD---KDNKPRYLVVNADEGEPGT 138
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREIMR DPHKL+EGCL+AG M ASAAYIYIRGE++ E L+ A EAYA GL+GK
Sbjct: 139 CKDREIMRKDPHKLVEGCLVAGRAMNASAAYIYIRGEFIEEAAVLQNAINEAYADGLIGK 198
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NAC SGYDFDV++H G GAY+CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV N
Sbjct: 199 NACNSGYDFDVYVHRGGGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVAN 258
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETVAV+PTI RRG WFA FGR+ N GTKL+C+SGHVN P TVEEEMSIPL+ELID+HC
Sbjct: 259 VETVAVAPTICRRGGSWFAGFGRERNQGTKLYCISGHVNNPATVEEEMSIPLRELIDKHC 318
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GGVRGGWDNL AVIPGGSS P+LPK +CDD LMD+DALK QSGLGTAAVIVMDKS DVV
Sbjct: 319 GGVRGGWDNLQAVIPGGSSTPILPKSVCDDQLMDFDALKDSQSGLGTAAVIVMDKSADVV 378
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
AI+RLS+FY+HESCGQCTPCREG+ W IM+R + G + EIDMLQE+TKQ+EGHTI
Sbjct: 379 RAISRLSHFYRHESCGQCTPCREGSKWTEQIMQRFEKGLGREREIDMLQELTKQVEGHTI 438
Query: 448 CALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
CALG+A AWP+QGLIRHFRPELE R+++ A+ EA A
Sbjct: 439 CALGEAFAWPIQGLIRHFRPELEARMQQFAKETGGEALA 477
>gi|395323888|gb|EJF56341.1| NADH-ubiquinone oxidoreductase [Dichomitus squalens LYAD-421 SS1]
Length = 500
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/424 (74%), Positives = 353/424 (83%), Gaps = 3/424 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIFTN Y HD LKGA RGDWH+TKD++LKG WI+ +K SGLRGRGGA
Sbjct: 35 YGGLKDQDRIFTNAYCRHDHGLKGATSRGDWHKTKDILLKGDSWIIQTIKDSGLRGRGGA 94
Query: 115 GFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 95 GFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGRA 154
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M ASAAYIYIRGE+ E ++++A EAY AG LGKNACGSGY FDV++H GAGAYICGE
Sbjct: 155 MNASAAYIYIRGEFYQEASHVQQAINEAYKAGYLGKNACGSGYSFDVYLHRGAGAYICGE 214
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFA FGR
Sbjct: 215 ETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGASWFAGFGRA 274
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PC VEEEMSI LK+LI++HCGGVRGGWDNLL +IPGGSSVP+LP
Sbjct: 275 RNQGTKLFCISGHVNNPCVVEEEMSILLKDLIEKHCGGVRGGWDNLLGIIPGGSSVPVLP 334
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
C +VLMDYD+LK QSGLGT AVIVMDKSTD+V AIAR ++FYKHESCGQCTPCREG
Sbjct: 335 IDKCAEVLMDYDSLKDAQSGLGTGAVIVMDKSTDIVKAIARFAHFYKHESCGQCTPCREG 394
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
T W+ +M+R G EIDML E+TKQIEG TICALGDAAAWP+QGL+RHFRPE+E+
Sbjct: 395 TTWMMNMMDRFVEGRGHQREIDMLLELTKQIEGRTICALGDAAAWPIQGLMRHFRPEVEK 454
Query: 472 RIKE 475
RI E
Sbjct: 455 RIAE 458
>gi|118590033|ref|ZP_01547437.1| NADH-ubiquinone dehydrogenase chain F 1 [Stappia aggregata IAM
12614]
gi|118437530|gb|EAV44167.1| NADH-ubiquinone dehydrogenase chain F 1 [Stappia aggregata IAM
12614]
Length = 433
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/428 (71%), Positives = 362/428 (84%), Gaps = 1/428 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YG+HD L+GA KRG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGLHDWGLEGAKKRGQWDNTKGLIDKGRDWIIQEMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREI+RHDPH L+EGCL+AG M A AA
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREILRHDPHTLVEGCLVAGYAMGAIAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A +AY AGL+GKN +GYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIRERERLQAAIDQAYDAGLIGKNN-KNGYDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF++ GR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFSALGRPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVNKP T EEE+ I E+ID+HCGG+RGGWDNLLAVIPGGSSVP L D
Sbjct: 241 LFCVSGHVNKPSTFEEELGISFAEMIDKHCGGIRGGWDNLLAVIPGGSSVPCLTAEQIKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ + SGLGTAAVIVMDKSTD++ AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 APMDFDTLRGLGSGLGTAAVIVMDKSTDIIKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ G + EEIDML +VTKQ+EGHTICALGDAAAWP+QGLI++FRP +E+RI ++
Sbjct: 361 VMERMVRGESSYEEIDMLFKVTKQVEGHTICALGDAAAWPIQGLIKNFRPVIEQRIDDYV 420
Query: 478 ERELLEAT 485
+ +T
Sbjct: 421 AKSKSSST 428
>gi|71410619|ref|XP_807595.1| NADH-ubiquinone oxidoreductase, mitochondrial [Trypanosoma cruzi
strain CL Brener]
gi|70871631|gb|EAN85744.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative
[Trypanosoma cruzi]
Length = 484
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/429 (73%), Positives = 364/429 (84%), Gaps = 2/429 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
EKTH GGLKD+DRIF NLY + A +RGDW+RTKD++LKG DW++ E+K SGLRG
Sbjct: 17 EKTH-GGLKDQDRIFLNLYNDFGTNIASAERRGDWYRTKDILLKGHDWVIAEMKASGLRG 75
Query: 111 RGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
RGGAGFPSGLKWSFMPKV DGRPSYLVVN DESEPGTCKDREIMRH+PHKL+EG LIAG
Sbjct: 76 RGGAGFPSGLKWSFMPKVKPDGRPSYLVVNGDESEPGTCKDREIMRHEPHKLVEGALIAG 135
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
MRA +IYIRGE+ NE +++ERA QEAYA G LG+NACGSGYDFD++ + GAGAYIC
Sbjct: 136 FAMRARYGFIYIRGEFYNEWRSVERAIQEAYAKGYLGRNACGSGYDFDLYTYRGAGAYIC 195
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETA++ SLEG GKPRLKPPFPAN GLYGCPTTVTNVETV+VSPTILRRGP WF+SFG
Sbjct: 196 GEETAMISSLEGGPGKPRLKPPFPANVGLYGCPTTVTNVETVSVSPTILRRGPQWFSSFG 255
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
RKNN+G KLFC+ GHVN+PCTVE+EMSIPL++LI+RH GGVRGGWDNLLAVIPGGSS PL
Sbjct: 256 RKNNAGVKLFCICGHVNRPCTVEDEMSIPLRDLIERHAGGVRGGWDNLLAVIPGGSSCPL 315
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK ICD+VLMDYD+LK VQ+GLGTAAVIVMDK+TD++ AI R+S FY +ESCGQCTPCR
Sbjct: 316 IPKSICDNVLMDYDSLKEVQTGLGTAAVIVMDKTTDLIAAIHRISKFYANESCGQCTPCR 375
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ WL +M R GNAK EEI + +V+KQ+EG TICAL AAAWPVQGL RHF P L
Sbjct: 376 EGSPWLEKMMRRFVHGNAKKEEIGTMLDVSKQLEGRTICALATAAAWPVQGLARHFTPML 435
Query: 470 ERRIKEHAE 478
E RI+ + E
Sbjct: 436 EERIERYWE 444
>gi|83953906|ref|ZP_00962627.1| NADH-quinone oxidoreductase, F subunit [Sulfitobacter sp. NAS-14.1]
gi|83841851|gb|EAP81020.1| NADH-quinone oxidoreductase, F subunit [Sulfitobacter sp. NAS-14.1]
Length = 431
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/417 (73%), Positives = 357/417 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YGMHD LKGA RG W T ++ G DWI++++K SGLRGRGGAGFP
Sbjct: 2 LQDQDRIFTNIYGMHDRTLKGAQARGHWDGTAGILKNGRDWIIDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGL+GKNAC SGYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYDAGLVGKNACKSGYDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+SFGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSSFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNL AVIPGGSSVP++P D
Sbjct: 242 LFAISGHVNNPCVVEEAMSITFEELIEKHCGGIRGGWDNLKAVIPGGSSVPMIPGAQMRD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMD STDV+ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLREQRSGLGTAAVIVMDNSTDVIKAIWRLAKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A+ EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVRGDAEPEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|71402029|ref|XP_803973.1| NADH-ubiquinone oxidoreductase, mitochondrial [Trypanosoma cruzi
strain CL Brener]
gi|70866690|gb|EAN82122.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative
[Trypanosoma cruzi]
Length = 484
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/429 (73%), Positives = 363/429 (84%), Gaps = 2/429 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
EKTH GGLKD+DRIF NLY + A +RGDW+RTKDL+LKG DW++ E+K SGLRG
Sbjct: 17 EKTH-GGLKDQDRIFLNLYNDFGTDITSAERRGDWYRTKDLLLKGHDWVIAEMKASGLRG 75
Query: 111 RGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
RGGAGFPSGLKWSFMPKV DGRPSYLVVN DESEPGTCKDREIMRH+PHKL+EG LIAG
Sbjct: 76 RGGAGFPSGLKWSFMPKVKPDGRPSYLVVNGDESEPGTCKDREIMRHEPHKLVEGALIAG 135
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
MRA +IYIRGE+ NE +++ERA QEAYA G LG+NACGSGYDFD++ + GAGAYIC
Sbjct: 136 FAMRARYGFIYIRGEFYNEWRSVERAIQEAYAKGYLGRNACGSGYDFDLYTYRGAGAYIC 195
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETA++ SLEG GKPRLKPPFPAN GLYGCPTTVTN ETV+VSPTILRRGP WF+SFG
Sbjct: 196 GEETAMISSLEGGPGKPRLKPPFPANVGLYGCPTTVTNAETVSVSPTILRRGPQWFSSFG 255
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
RKNN+G KLFC+ GHVN+PCTVE+EMSIPL++LI+RH GGVRGGWDNLLAVIPGGSS PL
Sbjct: 256 RKNNAGVKLFCICGHVNRPCTVEDEMSIPLRDLIERHAGGVRGGWDNLLAVIPGGSSCPL 315
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK ICD+VLMDYD+LK VQ+GLGTAAVIVMDKSTD++ AI R+S FY +ESCGQCTPCR
Sbjct: 316 IPKSICDNVLMDYDSLKEVQTGLGTAAVIVMDKSTDLIAAIHRISKFYANESCGQCTPCR 375
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ WL +M R GNAK EEI + +V+KQ+EG TICAL AAAWPVQGL RHF P L
Sbjct: 376 EGSPWLEKMMRRFVHGNAKKEEIGTMLDVSKQLEGRTICALATAAAWPVQGLARHFTPML 435
Query: 470 ERRIKEHAE 478
E RI+ + E
Sbjct: 436 EERIERYWE 444
>gi|323453876|gb|EGB09747.1| hypothetical protein AURANDRAFT_24188, partial [Aureococcus
anophagefferens]
Length = 469
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/418 (73%), Positives = 356/418 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
+KD+DRIFTNLYG D L A KRGDWH TKD++ G DWIV E+K SGLRGRGGAGFP
Sbjct: 1 VKDQDRIFTNLYGEEDWRLGDAKKRGDWHMTKDIMWMGPDWIVQEMKDSGLRGRGGAGFP 60
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
SGLKWSFMPK SDGRPS+LV+NADESEPGTCKDREIMR DPHKL+EGCL+AG MRA A
Sbjct: 61 SGLKWSFMPKASDGRPSFLVINADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY NE ++ A EAY AGL+GKNACGSGYDFD+++H GAGAY+CGEETAL+E
Sbjct: 121 YIYIRGEYFNEAMVMDEAIHEAYTAGLIGKNACGSGYDFDMYLHRGAGAYVCGEETALIE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGKQGKPRLKPPFPAN G++GCPTTVTNVET+AV+PTILRRG WF FGRKNN+GTK
Sbjct: 181 SLEGKQGKPRLKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGASWFTGFGRKNNAGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN P VEEEMSIP +ELID+HCGGVRGGW+ L AVIPGGSSVP+LP C++
Sbjct: 241 LFAISGHVNNPIVVEEEMSIPFRELIDKHCGGVRGGWNKLQAVIPGGSSVPVLPIEECEE 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
LMD+D LKA SGLGTAAV VMD + D++ AI RL++FY+HESCGQCTPCREGTGWL
Sbjct: 301 ALMDFDDLKARGSGLGTAAVTVMDDTVDMIAAIRRLAHFYRHESCGQCTPCREGTGWLET 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
I+ER++VG+A + EI ML E+++QIEGHTICALGDAAAWPVQGLIR F+P +E RI +
Sbjct: 361 ILERMEVGDADVREIGMLDEISRQIEGHTICALGDAAAWPVQGLIRRFQPVIEERIAD 418
>gi|83942667|ref|ZP_00955128.1| NADH-quinone oxidoreductase, F subunit [Sulfitobacter sp. EE-36]
gi|83846760|gb|EAP84636.1| NADH-quinone oxidoreductase, F subunit [Sulfitobacter sp. EE-36]
Length = 431
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/417 (73%), Positives = 357/417 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YGMHD LKGA RG W T ++ G DWI++++K SGLRGRGGAGFP
Sbjct: 2 LQDQDRIFTNIYGMHDRTLKGAQARGHWDGTAGILKNGRDWIIDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGL+GKNAC SGYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQTAIDEAYDAGLVGKNACKSGYDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+SFGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSSFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNL AVIPGGSSVP++P D
Sbjct: 242 LFAISGHVNNPCVVEEAMSITFEELIEKHCGGIRGGWDNLKAVIPGGSSVPMIPGAQMRD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAA+IVMD STDV+ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLREQRSGLGTAAIIVMDNSTDVIKAIWRLAKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A+ EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVRGDAEPEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|154332191|ref|XP_001561912.1| putative NADH-ubiquinone oxidoreductase,mitochondrial [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134059233|emb|CAM36932.1| putative NADH-ubiquinone oxidoreductase,mitochondrial [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 481
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/429 (73%), Positives = 362/429 (84%), Gaps = 2/429 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
E+ H G L+D+DRIFTNLY + A +RGDW+RTKD++LKG DW+VNE+K SGLRG
Sbjct: 14 ERVH-GQLRDQDRIFTNLYEDFGTGINAAERRGDWYRTKDILLKGHDWVVNEIKASGLRG 72
Query: 111 RGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
RGGAGFPSGLKWSFMPK D RPSY+VVN DESEPGTCKDREIMRH+PHKL+EG L+AG
Sbjct: 73 RGGAGFPSGLKWSFMPKKKQDDRPSYIVVNCDESEPGTCKDREIMRHEPHKLVEGALVAG 132
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
MRA YIYIRGE+ NE +++++A EAY G LGKNACGSG+DFD++ + GAGAYIC
Sbjct: 133 FAMRARYGYIYIRGEFYNEWRSVDKAIHEAYEKGYLGKNACGSGWDFDLYTYRGAGAYIC 192
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETA++ S+EG QGKPRLKPPFPAN GLYGCPTTVTN ETVAVSPTI+RRGP WFA FG
Sbjct: 193 GEETAMIASIEGGQGKPRLKPPFPANVGLYGCPTTVTNCETVAVSPTIIRRGPQWFAQFG 252
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
RK N+GTKLFC+SGHVN+PCTVEEEMSIPL+ELI+RH GGVRGGWDNLL VIPGGSS PL
Sbjct: 253 RKGNAGTKLFCISGHVNRPCTVEEEMSIPLQELIERHAGGVRGGWDNLLCVIPGGSSCPL 312
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PKHICD++LMDYDALK Q+GLGTAAVIVMDKSTDV++AI RLS FY HESCGQCTPCR
Sbjct: 313 IPKHICDNILMDYDALKEAQTGLGTAAVIVMDKSTDVINAIERLSQFYMHESCGQCTPCR 372
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ WL +M+R GNAK EEI L +V+KQ+EG +ICALG AAAWPVQGLIRHFRP +
Sbjct: 373 EGSPWLDKMMKRFVHGNAKKEEIYTLWDVSKQMEGRSICALGTAAAWPVQGLIRHFRPLM 432
Query: 470 ERRIKEHAE 478
E RI E
Sbjct: 433 EERIDRFWE 441
>gi|163759536|ref|ZP_02166621.1| nadh dehydrogenase i chain f transmembrane protein [Hoeflea
phototrophica DFL-43]
gi|162283133|gb|EDQ33419.1| nadh dehydrogenase i chain f transmembrane protein [Hoeflea
phototrophica DFL-43]
Length = 435
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/424 (73%), Positives = 359/424 (84%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG++D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGVYDKSLKGAMARGHWDGTKGILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLV+NADESEPGTCKDR+IMRHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVINADESEPGTCKDRDIMRHDPHTLIEGCVIAGFAMGAHAT 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN+ GYD DV++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYEAGLLGKNS-KLGYDMDVYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGGAWFAGIGRPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVN PCTVEE MSIP +ELID HCGG+RGGWDNLLAVIPGGSSVPL+P D
Sbjct: 241 LFCVSGHVNTPCTVEEAMSIPFRELIDTHCGGIRGGWDNLLAVIPGGSSVPLVPGADIVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D+L+ ++SGLGTAAVIVMDKSTDVV AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 TPMDFDSLRDLKSGLGTAAVIVMDKSTDVVKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M+R+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIRHFRPE+E RI ++
Sbjct: 361 VMDRMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRHFRPEMEARIDQYT 420
Query: 478 EREL 481
+
Sbjct: 421 RNAV 424
>gi|149202664|ref|ZP_01879636.1| NADH-quinone oxidoreductase, F subunit [Roseovarius sp. TM1035]
gi|149143946|gb|EDM31980.1| NADH-quinone oxidoreductase, F subunit [Roseovarius sp. TM1035]
Length = 431
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/417 (74%), Positives = 356/417 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMHD LKGA+ RG W T ++ G DWIVN++K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHDRSLKGALARGHWDGTAKILQNGRDWIVNQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAYAAGL+GKNAC SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQTAIDEAYAAGLVGKNACKSGWDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+ FGR NNSGTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSGFGRPNNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNL AVIPGGSSVP + +
Sbjct: 242 LFAISGHVNNPCVVEEAMSITFEELIEKHCGGIRGGWDNLKAVIPGGSSVPCIRGEFMRE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLREQRSGLGTAAVIVMDKSTDMIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 VMDRLVRGEAEVEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIK 418
>gi|209964545|ref|YP_002297460.1| NADH dehydrogenase I subunit F [Rhodospirillum centenum SW]
gi|209958011|gb|ACI98647.1| NADH-quinone oxidoreductase chain F [Rhodospirillum centenum SW]
Length = 433
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/422 (72%), Positives = 363/422 (86%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTNLYG D L+ A +RGDW T+D++ G D I+ VK+SGLRGRGGAGF
Sbjct: 2 LRDEDRIFTNLYGFEDFRLEAARRRGDWDNTQDILALGRDRIIELVKESGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDG P YLVVNADE EPGTCKDR+I+RHDPHKL+EGCLIAG + A+A
Sbjct: 62 TGMKWSFMPKKSDGGPVYLVVNADEGEPGTCKDRDILRHDPHKLVEGCLIAGFAIGATAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ +E ++++A EAYAAGL+G+NACGSGYDFD+++H GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEFYDEGSHVQQAIDEAYAAGLIGRNACGSGYDFDIYLHRGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR KPPFPA AGLY PTTV NVET+AV PTILRRG WFA GR NSGTK
Sbjct: 182 SLEGKKGQPRNKPPFPAMAGLYARPTTVNNVETIAVVPTILRRGATWFAGLGRPKNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN+PC VEEEM IPL+EL+++H GGVRGGWDNLLA+IPGGSSVP+LP+ CD
Sbjct: 242 VFCISGHVNRPCNVEEEMGIPLRELVEKHAGGVRGGWDNLLAIIPGGSSVPMLPRETCDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+ V+SGLGTAAVIVMD+STDVV AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 302 VLMDFDSLREVRSGLGTAAVIVMDRSTDVVKAIARLSKFYMHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ G A++EEIDML +V+K+IEGHTICALGDAAAWP+QGLIR+FRPE+ERRI E+
Sbjct: 362 VMERMVKGQARIEEIDMLLDVSKEIEGHTICALGDAAAWPIQGLIRNFRPEMERRILEYR 421
Query: 478 ER 479
R
Sbjct: 422 TR 423
>gi|409040396|gb|EKM49884.1| hypothetical protein PHACADRAFT_265636 [Phanerochaete carnosa
HHB-10118-sp]
Length = 499
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/422 (73%), Positives = 353/422 (83%), Gaps = 3/422 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIFTN Y HD +KGA RGDWHRTKD++LKG WI+ +K SGLRGRGGA
Sbjct: 34 YGGLKDQDRIFTNAYCRHDHGIKGAQSRGDWHRTKDILLKGDSWIIQTIKDSGLRGRGGA 93
Query: 115 GFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM K D RP YLVVNADE EPGTCKDREI+R DPHKL+EGCL+AG
Sbjct: 94 GFPSGLKWSFMNKPDWQKDPRPRYLVVNADEGEPGTCKDREILRGDPHKLVEGCLVAGRA 153
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M ASAAYIYIRGE+ E +L++A EAY AG LGKNAC SGYDFDV++H GAGAYICGE
Sbjct: 154 MNASAAYIYIRGEFYQEASHLQQAINEAYKAGFLGKNACNSGYDFDVYLHRGAGAYICGE 213
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ESLEGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFA FGR
Sbjct: 214 ETALIESLEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTICRRGAPWFAGFGRA 273
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PC VEEEMSIPLK+L+++HCGGV GGWDNLL +IPGGSSVP+LP
Sbjct: 274 RNQGTKLFCISGHVNNPCVVEEEMSIPLKDLVEKHCGGVVGGWDNLLGIIPGGSSVPVLP 333
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
C +VLMDYD+LK QSGLGT AVIVM+KSTD+V AIAR ++FYKHESCGQCTPCREG
Sbjct: 334 IKKCGEVLMDYDSLKDAQSGLGTGAVIVMNKSTDIVAAIARFAHFYKHESCGQCTPCREG 393
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
T W+ +M+RL G EIDML E+TKQIEG TICALGDAAAWP+QGL+RHFRPE+E+
Sbjct: 394 TTWMMNMMDRLVEGRGHQREIDMLLELTKQIEGRTICALGDAAAWPIQGLMRHFRPEVEK 453
Query: 472 RI 473
RI
Sbjct: 454 RI 455
>gi|110680462|ref|YP_683469.1| NADH dehydrogenase I subunit F [Roseobacter denitrificans OCh 114]
gi|109456578|gb|ABG32783.1| NADH-quinone oxidoreductase chain F [Roseobacter denitrificans OCh
114]
Length = 431
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/417 (74%), Positives = 354/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YGMHD LKGA RG W T ++ KG DWIV+++K SGLRGRGGAGFP
Sbjct: 2 LNDQDRIFTNIYGMHDRTLKGAQARGHWDGTDAIIKKGRDWIVDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLVEGCLIASFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY AGL+GKNA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDAGLVGKNAAGSGWDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+SFGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSSFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI+ HCGG+RGGWDNL AVIPGGSSVPL+P D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIETHCGGIRGGWDNLKAVIPGGSSVPLIPGKDMKD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMD STDV+ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLREQRSGLGTAAVIVMDNSTDVIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+ EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVTGEAEPEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|157864056|ref|XP_001687575.1| putative NADH-ubiquinone oxidoreductase,mitochondrial [Leishmania
major strain Friedlin]
gi|68223786|emb|CAJ02018.1| putative NADH-ubiquinone oxidoreductase,mitochondrial [Leishmania
major strain Friedlin]
Length = 481
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/429 (72%), Positives = 363/429 (84%), Gaps = 2/429 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
E+ H G LKD+DRIFTNLY + A +RGDW+RTKD++LKG DW++NE+K SGLRG
Sbjct: 14 ERVH-GHLKDQDRIFTNLYNDFGTGIDAAERRGDWYRTKDILLKGHDWVINEIKASGLRG 72
Query: 111 RGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
RGGAGFPSGLKWSFMPK D RPSY+VVN DESEPGTCKDREIMRH+PHK++EG L+AG
Sbjct: 73 RGGAGFPSGLKWSFMPKKKQDDRPSYIVVNCDESEPGTCKDREIMRHEPHKVVEGALLAG 132
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
MRA YIYIRGE+ NE +++E+A EAY G LGKNACGSG+DFD++ + GAGAYIC
Sbjct: 133 FAMRARYGYIYIRGEFYNEWRSVEKAIHEAYEKGYLGKNACGSGWDFDLYTYRGAGAYIC 192
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETA++ S+EG QGKPRLKPPFPAN GLYGCPTTVTN ETVAVSPTI+RRGP WFA FG
Sbjct: 193 GEETAMIASIEGGQGKPRLKPPFPANVGLYGCPTTVTNCETVAVSPTIIRRGPQWFAQFG 252
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
RK N+GTKLFC+SGHVN+PCTVEEEMS+PL+EL++RH GGVRGGWDNLL VIPGGSS PL
Sbjct: 253 RKGNAGTKLFCISGHVNRPCTVEEEMSMPLRELLERHAGGVRGGWDNLLCVIPGGSSCPL 312
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PKHICDD+LMDYDALK Q+GLGTAAVIVMDKSTDV++AI RLS FY HESCGQCTPCR
Sbjct: 313 IPKHICDDILMDYDALKEAQTGLGTAAVIVMDKSTDVINAIERLSQFYMHESCGQCTPCR 372
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ WL +M+R GNAK EEI L +V+KQ+EG +ICALG AAAWPVQGLIRHF+P +
Sbjct: 373 EGSPWLDKMMKRFVNGNAKKEEIYTLWDVSKQMEGRSICALGTAAAWPVQGLIRHFKPLM 432
Query: 470 ERRIKEHAE 478
E RI+ E
Sbjct: 433 EERIERFWE 441
>gi|401414983|ref|XP_003871988.1| NADH-ubiquinone oxidoreductase, mitochondrial,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322488209|emb|CBZ23455.1| NADH-ubiquinone oxidoreductase, mitochondrial,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 481
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/429 (73%), Positives = 363/429 (84%), Gaps = 2/429 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
E+ H G LKD+DRIFTNLY + A +RGDW+RTKD++LKG DW++NE+K SGLRG
Sbjct: 14 ERVH-GCLKDQDRIFTNLYNDFGTGIDAAERRGDWYRTKDILLKGHDWVINEIKASGLRG 72
Query: 111 RGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
RGGAGFPSGLKWSFMPK D RPSY+VVN DESEPGTCKDREIMRH+PHK++EG L+AG
Sbjct: 73 RGGAGFPSGLKWSFMPKKKQDDRPSYIVVNCDESEPGTCKDREIMRHEPHKVVEGALLAG 132
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
MRA YIYIRGE+ NE + +E+A EAYA G LGK+ACGSG+DFD++ + GAGAYIC
Sbjct: 133 FAMRARYGYIYIRGEFYNEWRAVEKAIHEAYAKGYLGKSACGSGWDFDLYTYRGAGAYIC 192
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETA++ SLEG QGKPRLKPPFPAN GLYGCPTTVTN ETVAVSPTI+RRGP WFA FG
Sbjct: 193 GEETAMIASLEGGQGKPRLKPPFPANVGLYGCPTTVTNCETVAVSPTIIRRGPQWFAQFG 252
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
RK N+GTKL+C+SGHVN+PCTVEEEMS+PL+ELI+RH GGVRGGWDNLL VIPGGSS PL
Sbjct: 253 RKGNAGTKLYCISGHVNRPCTVEEEMSMPLRELIERHAGGVRGGWDNLLCVIPGGSSCPL 312
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PKHICDD+LMDYDALK Q+GLGTAAVIVMDK+TDV++AI RLS FY HESCGQCTPCR
Sbjct: 313 IPKHICDDILMDYDALKEAQTGLGTAAVIVMDKTTDVINAIERLSQFYMHESCGQCTPCR 372
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ WL +M+R GNAK EEI L +V+KQ+EG +ICALG AAAWPVQGLIRHFRP +
Sbjct: 373 EGSPWLDKMMKRFVNGNAKKEEIYTLWDVSKQMEGRSICALGTAAAWPVQGLIRHFRPLM 432
Query: 470 ERRIKEHAE 478
E RI+ E
Sbjct: 433 EERIERFWE 441
>gi|347758127|ref|YP_004865689.1| NADH oxidoreductase subunit F [Micavibrio aeruginosavorus ARL-13]
gi|347590645|gb|AEP09687.1| NADH oxidoreductase, F subunit [Micavibrio aeruginosavorus ARL-13]
Length = 430
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/421 (74%), Positives = 361/421 (85%), Gaps = 2/421 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG L+ A RGDW TKD++ +G DWI++E+KKSGLRGRGGAGFP
Sbjct: 2 LDDKDRIFTNIYGWEPYSLEYAKARGDWDNTKDIIAEGRDWIIDEMKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK + DGRPSYLV+NADESEPGTCKDR+I+R++PHKL+EG LIAG M A A
Sbjct: 62 TGMKWSFMPKENPDGRPSYLVINADESEPGTCKDRDILRNEPHKLIEGALIAGFAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE + +A +EAYAAGLLGKNA GSG+DFDV +H GAGAYICGEETALL
Sbjct: 122 AYIYIRGEFYNEGSAVVKAIKEAYAAGLLGKNAAGSGWDFDVVLHRGAGAYICGEETALL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR-KNNSG 295
SLEGK+G+PR KPPFPA AGLY CPTTV NVET+AV+PTILRRG WFA GR + N+G
Sbjct: 182 NSLEGKKGEPRNKPPFPAMAGLYSCPTTVNNVETIAVAPTILRRGGSWFAGIGRDEKNTG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKLFCVSGHVN PC VEE M I LKELID+HCGGVRGGWDNLLAVIPGGSS PLLP+ +C
Sbjct: 242 TKLFCVSGHVNNPCNVEEAMGITLKELIDKHCGGVRGGWDNLLAVIPGGSSTPLLPRDVC 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
D V+MD+D+L+A SGLGTA VIVMDKSTD+V AIARLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 DTVVMDFDSLRAAGSGLGTAGVIVMDKSTDIVYAIARLSEFYKHESCGQCTPCREGTGWM 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
W +M R+ GNA +EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+E+RI E
Sbjct: 362 WRVMTRMVKGNATVEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRHFRPEMEKRIME 421
Query: 476 H 476
+
Sbjct: 422 Y 422
>gi|114771823|ref|ZP_01449216.1| NADH-quinone oxidoreductase, F subunit [Rhodobacterales bacterium
HTCC2255]
gi|114547639|gb|EAU50530.1| NADH-quinone oxidoreductase, F subunit [alpha proteobacterium
HTCC2255]
Length = 431
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/417 (73%), Positives = 356/417 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYGMHD L+GA RG W T ++ G DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNLYGMHDRSLRGAQSRGHWSETAKIIKNGHDWIIDEMKNSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEPGTCKDREIMR+DPH L+EG LIA M ++A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVINADESEPGTCKDREIMRNDPHALIEGALIASFAMSSNAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLGKNA SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFIREREALQLAIDECYDAGLLGKNAAKSGWDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWF SFGR+NN GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGGDWFKSFGRENNYGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSIPL+EL+DRHCGGVRGGW NL AVIPGGSSVPLLP IC D
Sbjct: 242 LFAISGHVNNPCVVEEAMSIPLQELLDRHCGGVRGGWKNLKAVIPGGSSVPLLPADICSD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMD++TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDWLREQRSGLGTAAVIVMDQNTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A+ +EIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVKGDAEPDEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|188593015|emb|CAQ55523.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative
[Trypanosoma brucei TREU927]
Length = 496
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/455 (69%), Positives = 372/455 (81%), Gaps = 4/455 (0%)
Query: 25 VGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGD 84
VG S + A++ QPP E+ GGLKD+DRIF NLY + A +RGD
Sbjct: 5 VGFLSATGSLLQAAASQQPPTQQ---EQRVHGGLKDQDRIFVNLYQDFGTDIDSAERRGD 61
Query: 85 WHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADES 143
W+RT+DL+LKG DW++NE+K SGLRGRGGAGFPSGLKWSFMPK DGRPSY+VVN DES
Sbjct: 62 WYRTRDLLLKGHDWVINEIKASGLRGRGGAGFPSGLKWSFMPKSKPDGRPSYIVVNGDES 121
Query: 144 EPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAG 203
EPGTCKDREIMRH+PHKL+EG LIAG MRA YIYIRGE+ NE + +++A +EAYA G
Sbjct: 122 EPGTCKDREIMRHEPHKLVEGALIAGFAMRARYGYIYIRGEFYNEWRAVDQAIKEAYARG 181
Query: 204 LLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPT 263
LG+NACGSGYDFD++ + GAGAYICGEETA++ S+EG GKPRLKPPFPAN GLYGCPT
Sbjct: 182 YLGRNACGSGYDFDLYTYCGAGAYICGEETAMISSIEGGPGKPRLKPPFPANVGLYGCPT 241
Query: 264 TVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI 323
TVTNVETV+VSPTILRRGP WF SFGR+NN+G KLFC+ GHVN+PCTVEEEMSIPL++LI
Sbjct: 242 TVTNVETVSVSPTILRRGPSWFNSFGRRNNAGVKLFCICGHVNRPCTVEEEMSIPLRDLI 301
Query: 324 DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS 383
+RH GGVRGGWDNLLAVIPGGSS PL+PK ICD+VLMD+DALK Q+GLGTAAVIVMDKS
Sbjct: 302 ERHAGGVRGGWDNLLAVIPGGSSCPLIPKSICDNVLMDFDALKEAQTGLGTAAVIVMDKS 361
Query: 384 TDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE 443
TD++ AI RLS FY HESCGQCTPCREG+ WL +M+R GNA++EE+ + +V+KQ+E
Sbjct: 362 TDLIAAIHRLSMFYAHESCGQCTPCREGSPWLEKMMQRFVHGNARMEEVGTMLDVSKQLE 421
Query: 444 GHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
G TICAL AAAWPVQGL RHF P L+ RI+++ E
Sbjct: 422 GRTICALATAAAWPVQGLARHFTPLLQERIEKYWE 456
>gi|254501883|ref|ZP_05114034.1| NADH oxidoreductase (quinone), F subunit [Labrenzia alexandrii
DFL-11]
gi|222437954|gb|EEE44633.1| NADH oxidoreductase (quinone), F subunit [Labrenzia alexandrii
DFL-11]
Length = 433
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/428 (71%), Positives = 362/428 (84%), Gaps = 1/428 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+HD L+GA KRG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLHDWGLEGAKKRGQWDNTKGLLDKGRDWIIQEMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREI+RHDPH L+EGCL+AG M A AA
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREILRHDPHTLVEGCLVAGFAMGAIAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A +AY AGL+GKN +GYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIRERERLQAAIDQAYDAGLIGKNN-KNGYDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFAS GR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGGGWFASLGRPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVN+P T EEE+ +P E+ID+HCGG+RGGWDNLLAVIPGGSSVP D
Sbjct: 241 LFCVSGHVNQPATFEEELGVPFSEMIDKHCGGIRGGWDNLLAVIPGGSSVPCCTADEIKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ + SGLGTAAVIVMDKSTDV+ AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 APMDFDTLRGMGSGLGTAAVIVMDKSTDVIKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ G + EEIDML +VTKQ+EGHTICALGDAAAWP+QGLI++FRP +E+RI ++
Sbjct: 361 VMERMVKGESSYEEIDMLFKVTKQVEGHTICALGDAAAWPIQGLIKNFRPVIEQRIDDYV 420
Query: 478 ERELLEAT 485
+ +T
Sbjct: 421 AKSRTSST 428
>gi|430813744|emb|CCJ28931.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 435
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/429 (72%), Positives = 365/429 (85%), Gaps = 7/429 (1%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FGGLKD DRIF NLY +D LK A K GDW++TK+++LKG +WI++E++ SGLR
Sbjct: 11 PKKTVFGGLKDYDRIFQNLYSRYDTSLKSAQKLGDWYKTKEILLKGHEWIISEIRDSGLR 70
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM K D R YLV+NADE EPGTCKDREIMR +PHKL+EGCL
Sbjct: 71 GRGGAGFPSGLKWSFMNKPGFEKDQRARYLVINADEGEPGTCKDREIMRKEPHKLIEGCL 130
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
IAG M A+ YIYIRGE+ NE L+ A EAY GKNACGSGY+FD++IH GAGA
Sbjct: 131 IAGRAMNATVCYIYIRGEFYNEAIILQSAIDEAYK----GKNACGSGYNFDIYIHRGAGA 186
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEET+L+ESLEGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAV+PTI RRG WF+
Sbjct: 187 YICGEETSLIESLEGKQGKPRLKPPFPADVGLFGCPTTVTNVETVAVAPTICRRGASWFS 246
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ NSGTKLFC+SGHVN PCTVEEEMSIPLK+LI+RHCGGVRGGWDNLL +IPGGSS
Sbjct: 247 SFGRERNSGTKLFCISGHVNNPCTVEEEMSIPLKDLIERHCGGVRGGWDNLLGIIPGGSS 306
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP+L K C++VLMD+D+L+ QSGLGTAAVIVMDKSTD++ AI+R S FYKHESCGQCT
Sbjct: 307 VPILNKTQCENVLMDFDSLRDAQSGLGTAAVIVMDKSTDLIRAISRFSAFYKHESCGQCT 366
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT W++ IM+RL+ G+A++ EIDML E+TK+IEGHTICALGDAAAWPVQGLIR+FR
Sbjct: 367 PCREGTTWIYNIMKRLETGDAQIREIDMLWELTKEIEGHTICALGDAAAWPVQGLIRNFR 426
Query: 467 PELERRIKE 475
+E RIK+
Sbjct: 427 DYIEDRIKK 435
>gi|407422510|gb|EKF38905.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative
[Trypanosoma cruzi marinkellei]
Length = 484
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/429 (73%), Positives = 362/429 (84%), Gaps = 2/429 (0%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
EKTH GGLKD+DRIF NLY + A +RGDW+RTKDL+LKG DW++ E+K SGLRG
Sbjct: 17 EKTH-GGLKDQDRIFLNLYNDFGTDIASAERRGDWYRTKDLLLKGHDWVIAEMKASGLRG 75
Query: 111 RGGAGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
RGGAGFPSGLKWSFMPKV DGRPSYL+VN DESEPGTCKDREIMRH+PHKL+EG LIAG
Sbjct: 76 RGGAGFPSGLKWSFMPKVKPDGRPSYLIVNCDESEPGTCKDREIMRHEPHKLVEGALIAG 135
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
MRA YIYIRGE+ NE +++ERA QEAYA G LG+NACGSGYDFD++ + GAGAYIC
Sbjct: 136 FAMRARYGYIYIRGEFYNEWRSVERAIQEAYAKGYLGRNACGSGYDFDLYTYRGAGAYIC 195
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETA++ SLEG GKPRLKPPFPAN GLYGCPTTVTN ETV+VSPTILRRGP WF+SFG
Sbjct: 196 GEETAMISSLEGGPGKPRLKPPFPANVGLYGCPTTVTNAETVSVSPTILRRGPQWFSSFG 255
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
RKNN+G KLFC+ GHVN+PCTVE+EMSIPL++LI+RH GGVRGGWDNLLAVIPGG+S PL
Sbjct: 256 RKNNAGVKLFCICGHVNRPCTVEDEMSIPLRDLIERHAGGVRGGWDNLLAVIPGGASCPL 315
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK ICD+VLMDYD LK VQ+GLGTAAVIVMDKSTD++ AI R+S FY +ESCGQCTPCR
Sbjct: 316 IPKSICDNVLMDYDGLKEVQTGLGTAAVIVMDKSTDLIAAIHRISKFYANESCGQCTPCR 375
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG+ WL +M R GNAK EEI + +V+KQ+EG TICAL AAAWPVQGL RHF P L
Sbjct: 376 EGSPWLEKMMRRFVHGNAKKEEIGTMLDVSKQLEGRTICALATAAAWPVQGLARHFTPML 435
Query: 470 ERRIKEHAE 478
E RI+ + E
Sbjct: 436 EERIERYWE 444
>gi|398829514|ref|ZP_10587712.1| NADH-quinone oxidoreductase, F subunit [Phyllobacterium sp. YR531]
gi|398216999|gb|EJN03539.1| NADH-quinone oxidoreductase, F subunit [Phyllobacterium sp. YR531]
Length = 434
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/420 (73%), Positives = 354/420 (84%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF N+YG+HD LKG M RG W T ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFNNIYGLHDKSLKGVMSRGHWDGTAGIIAKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLV+NADESEPGTCKDR+IMRHDPH L+EGCLIAG M A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVINADESEPGTCKDRDIMRHDPHTLIEGCLIAGFAMAAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN +G+D+D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQLAIDECYDAGLLGKNN-KNGWDYDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSGIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCTVEEEM IP +ELI+RH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMVSGHVNNPCTVEEEMGIPFRELIERHAGGIRGGWDNLLAVIPGGASCPVVPAADIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+AV+S GTAAVIVMDKSTD+V AIARLSYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRAVKSSFGTAAVIVMDKSTDIVRAIARLSYFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIRHFRPE+ERRI E +
Sbjct: 361 VMERMVTGNAQKREIDMLLDVTKQIEGHTICALGDAAAWPVQGLIRHFRPEIERRIDEFS 420
>gi|254486414|ref|ZP_05099619.1| NADH oxidoreductase (quinone), F subunit [Roseobacter sp. GAI101]
gi|214043283|gb|EEB83921.1| NADH oxidoreductase (quinone), F subunit [Roseobacter sp. GAI101]
Length = 431
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/417 (73%), Positives = 355/417 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YGMHD LKGA RG W T ++ G DWI++++K SGLRGRGGAGFP
Sbjct: 2 LQDQDRIFTNIYGMHDRTLKGAQARGHWDGTAGILKNGRDWIIDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M+A+A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLVEGCLIASFAMQANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY AGL+GKNAC SGYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDAGLVGKNACKSGYDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+SFGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSSFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI+ HCGG+RGGW NL AVIPGGSSVP++P D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIETHCGGIRGGWSNLKAVIPGGSSVPMIPGAQMKD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMD STDV+ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLREQRSGLGTAAVIVMDNSTDVIKAIWRLAKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVTGDANPEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|163746205|ref|ZP_02153564.1| NADH-quinone oxidoreductase chain F [Oceanibulbus indolifex HEL-45]
gi|161380950|gb|EDQ05360.1| NADH-quinone oxidoreductase chain F [Oceanibulbus indolifex HEL-45]
Length = 431
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/417 (74%), Positives = 354/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YGMHD LKGA RG W T ++ KG DWIV+++K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGMHDRTLKGAQSRGHWDGTAGIIQKGRDWIVDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A EAY AGL+GKNA SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYLRGEYIREREALQTAIDEAYEAGLVGKNASKSGWDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFAGFGRANNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI+ HCGG+RGGWDNL AVIPGGSSVPL+P D
Sbjct: 242 LFAISGHVNNPCVVEEAMSIGFEELIETHCGGIRGGWDNLKAVIPGGSSVPLIPGKDMRD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMD STDV+ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLREQRSGLGTAAVIVMDNSTDVIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A+ EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVTGDAEPEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|149914585|ref|ZP_01903115.1| NADH-quinone oxidoreductase, F subunit [Roseobacter sp. AzwK-3b]
gi|149811378|gb|EDM71213.1| NADH-quinone oxidoreductase, F subunit [Roseobacter sp. AzwK-3b]
Length = 431
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/417 (73%), Positives = 355/417 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYGMHD LKGAM RG W T ++ G +WI++++K SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNLYGMHDRSLKGAMARGHWDGTAKILQNGREWIIDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M+A A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASYAMKAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGL+GKNAC SGYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQTAIDEAYDAGLIGKNACKSGYDFDLYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV+PTILRRGP+WFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAMAGLYGCPTTVNNVESIAVAPTILRRGPEWFAGFGRPNNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+F +SGHVN PC VEE MSI +ELID+HCGG+RGGW NL AVIPGGSSVP + D
Sbjct: 242 IFAISGHVNAPCVVEESMSISFEELIDKHCGGIRGGWSNLKAVIPGGSSVPCVHGENMRD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+DALK S LGTAAVIVMD+STD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AVMDFDALKEKGSSLGTAAVIVMDQSTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 VMDRLVRGEAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIK 418
>gi|399059565|ref|ZP_10745181.1| NADH-quinone oxidoreductase, F subunit [Novosphingobium sp. AP12]
gi|398039272|gb|EJL32411.1| NADH-quinone oxidoreductase, F subunit [Novosphingobium sp. AP12]
Length = 436
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/423 (73%), Positives = 359/423 (84%), Gaps = 6/423 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG LK A RG W TK L+ +G I++E+K SGLRGRGGAGFP
Sbjct: 3 LADKDRIFTNVYGYQPWNLKEAQARGAWDNTKALIERGNAAIIDEMKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKV------SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
+G+KWSFMPK + +PS+LV+NADESEPG+CKDREI+RHDPH LLEG L+AG
Sbjct: 63 TGMKWSFMPKQPPLDQNGNPKPSFLVINADESEPGSCKDREIIRHDPHMLLEGALVAGFA 122
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A AAYIYIRGEY+ E + L AR EAYAAGLLGKNACGSGYDFDV +H GAGAYICGE
Sbjct: 123 MGARAAYIYIRGEYIREAETLFAARDEAYAAGLLGKNACGSGYDFDVFVHRGAGAYICGE 182
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETA++ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+SFGR+
Sbjct: 183 ETAMIESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGRE 242
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NN GTKLF +SGHVN+PC VEEEMSIP ELI+RHCGG+RGG DNLLAVIPGGSSVPL+P
Sbjct: 243 NNKGTKLFQISGHVNRPCVVEEEMSIPFTELIERHCGGIRGGRDNLLAVIPGGSSVPLVP 302
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
D MD+D LKAV SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREG
Sbjct: 303 SADIWDAPMDFDGLKAVGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREG 362
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
TGW+W +MERL+ G+A +EEIDMLQ+VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+ER
Sbjct: 363 TGWMWRVMERLRTGDAHVEEIDMLQQVTKQVEGHTICALGDAAAWPIQGLIKHFRPEIER 422
Query: 472 RIK 474
RI+
Sbjct: 423 RIE 425
>gi|83951746|ref|ZP_00960478.1| NADH-quinone oxidoreductase, F subunit [Roseovarius nubinhibens
ISM]
gi|83836752|gb|EAP76049.1| NADH-quinone oxidoreductase, F subunit [Roseovarius nubinhibens
ISM]
Length = 431
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/417 (74%), Positives = 352/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYGMHD LKGA RG W T ++ KG DWI++ +K SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNLYGMHDRSLKGAQARGHWDGTAGILAKGRDWIIDNMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGL+GKNAC SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYEAGLVGKNACKSGWDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAGFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGENMKD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+DAL+ V S LGTAAVIVMDK TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDALREVGSSLGTAAVIVMDKQTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR +E RIK
Sbjct: 362 VMDRLVKGEAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDVIEDRIK 418
>gi|388579479|gb|EIM19802.1| NADH-ubiquinone oxidoreductase [Wallemia sebi CBS 633.66]
Length = 488
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/451 (68%), Positives = 367/451 (81%), Gaps = 10/451 (2%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
RS AS +PP +GGL+D+DRIFTNLY HD LKGAM RGDWH+
Sbjct: 7 RSVLRSARGFASVAEPP-------VRGYGGLRDQDRIFTNLYDRHDFGLKGAMSRGDWHK 59
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESE 144
TK++VLKG +++ VK SGLRGRGGAGFPSGLKWSFM K D RP YLVVNADE E
Sbjct: 60 TKEIVLKGDQYLIQTVKDSGLRGRGGAGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGE 119
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L++A EAY AGL
Sbjct: 120 PGTCKDREIMRGDPHKLIEGCLVAGRAMNATAAYIYIRGEFYHEAVRLQQAIDEAYKAGL 179
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
+G +ACGSGY FDV+IH GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTT
Sbjct: 180 IGDDACGSGYKFDVYIHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTT 239
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
V NVETVAV PTI+RRGP WF +FGR NSGTKLF +SGHVN PC VEEEMSIPLKELI+
Sbjct: 240 VANVETVAVVPTIVRRGPAWFDAFGRDRNSGTKLFAISGHVNNPCVVEEEMSIPLKELIE 299
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
+HCGGVRGGW+NL ++PGGSSVP++P+ +C DVLMD+D+LK Q+ LGT A+IVMD+ST
Sbjct: 300 KHCGGVRGGWENLKGIVPGGSSVPVIPRDVCTDVLMDFDSLKDAQTSLGTGAIIVMDQST 359
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D++ AI+R + FYKHESCGQCTPCREGT W++ +M R + G A EIDM+ E++KQIEG
Sbjct: 360 DMIKAISRFAKFYKHESCGQCTPCREGTTWMYNMMNRFEKGQASNREIDMIIELSKQIEG 419
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKE 475
HTICALGDAAAWP+QGL+RHFRPE+E+RI+E
Sbjct: 420 HTICALGDAAAWPIQGLVRHFRPEMEQRIRE 450
>gi|260574764|ref|ZP_05842767.1| NADH-quinone oxidoreductase, F subunit [Rhodobacter sp. SW2]
gi|259023181|gb|EEW26474.1| NADH-quinone oxidoreductase, F subunit [Rhodobacter sp. SW2]
Length = 431
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/417 (73%), Positives = 355/417 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMHD L GA KRG+W T + G DWIV++VK SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHDRSLAGARKRGNWDGTAGFLAHGRDWIVDQVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPKVSDGRP+YLV+NADESEPGTCKDREIMRHDPH L+EG LIAG M A A
Sbjct: 62 TGLKWSFMPKVSDGRPAYLVINADESEPGTCKDREIMRHDPHTLVEGALIAGFAMGAVAG 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGL+GKNACGSGY++D+++ +GAGAYICGEETA+LE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYDAGLIGKNACGSGYNYDLYLVHGAGAYICGEETAMLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA +GLYGCPTTV NVE++AV PTILRRG WFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAASGLYGCPTTVNNVESIAVVPTILRRGASWFAGFGRPNNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHV PC VEE MSIPL+EL+D+HCGGVRGGW NL AVIPGGSSVP+L CD+
Sbjct: 242 LFGISGHVVNPCVVEEAMSIPLRELLDKHCGGVRGGWKNLKAVIPGGSSVPMLNAAQCDE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMD+STDV+ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDWLREQRSGLGTAAVIVMDQSTDVIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML VTKQ+EGHTICALGDAAAWP+QGL+RHFR E+E RIK
Sbjct: 362 VMDRLVKGEAEIEEIDMLLSVTKQVEGHTICALGDAAAWPIQGLVRHFREEIEDRIK 418
>gi|85703201|ref|ZP_01034305.1| NADH-quinone oxidoreductase, F subunit [Roseovarius sp. 217]
gi|85672129|gb|EAQ26986.1| NADH-quinone oxidoreductase, F subunit [Roseovarius sp. 217]
Length = 431
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/417 (74%), Positives = 357/417 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMHD LKGA+ RG W T ++ G DWIVN++K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHDRSLKGALARGHWDGTAKILQNGRDWIVNQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAYAAGL+GKNAC SG+DFD+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQVAIDEAYAAGLVGKNACKSGWDFDIYLAHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+SFGR NNSGTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSSFGRPNNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNL AVIPGGSSVP + +
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLKAVIPGGSSVPCIRGEHMRE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLREQRSGLGTAAVIVMDKSTDMIRAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 VMDRLVRGDAEVEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIK 418
>gi|393911672|gb|EFO27867.2| NADH oxidoreductase [Loa loa]
Length = 481
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/455 (67%), Positives = 368/455 (80%), Gaps = 4/455 (0%)
Query: 25 VGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGD 84
VG+ S + +G + + + P KT FG L+DEDRIFTNLYG +D LK AMK GD
Sbjct: 17 VGIISLTIRGKTATAHHELKKP----RKTKFGSLRDEDRIFTNLYGRYDFRLKSAMKLGD 72
Query: 85 WHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESE 144
W++TK+++LKG DWI+ E+ SG+RGRGGAGFP+G+KWSFM + DGRP YL +NADE E
Sbjct: 73 WYKTKEVLLKGQDWIIKEMSASGMRGRGGAGFPTGIKWSFMKRPFDGRPKYLCINADEGE 132
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDRE++RH PHKL+EG LIAG M A AAYIYIRGE+ NE L+ A EAY AG
Sbjct: 133 PGTCKDREVIRHHPHKLIEGALIAGYAMGARAAYIYIRGEFYNEACILQEAIHEAYKAGF 192
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
+GKN+C +GY FDV IH GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTT
Sbjct: 193 IGKNSCDTGYSFDVFIHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTT 252
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
V N+ET+A +P I +RG +W++SFGR+ N GTKL+C+SGHV PCTVEEEMSIPLKELI+
Sbjct: 253 VNNIETIASAPAICKRGAEWYSSFGRERNHGTKLYCISGHVVNPCTVEEEMSIPLKELIE 312
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
RHCGGV GGWDNL+A+IPGGSSVP++PK IC+ VLMDYDAL AVQ+GLGTAAVIVM+K
Sbjct: 313 RHCGGVIGGWDNLMAIIPGGSSVPMIPKDICETVLMDYDALIAVQTGLGTAAVIVMNKEV 372
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+V IARLS+FY+HESCGQCTPCREGT WL +M R G AK EID L E++KQIE
Sbjct: 373 DIVKCIARLSHFYRHESCGQCTPCREGTKWLNSVMWRFVKGQAKPSEIDSLWEISKQIEA 432
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
HTICALGDAAAWP+QGLIRHFRPE+E RI ++ +
Sbjct: 433 HTICALGDAAAWPIQGLIRHFRPEIEHRISDYCAK 467
>gi|50547327|ref|XP_501133.1| YALI0B20372p [Yarrowia lipolytica]
gi|7684614|gb|AAF65194.2|AF197536_1 nucleotide-binding respiratory complex I subunit [Yarrowia
lipolytica]
gi|6689650|emb|CAB65520.1| NUBM protein [Yarrowia lipolytica]
gi|49646999|emb|CAG83386.1| YALI0B20372p [Yarrowia lipolytica CLIB122]
Length = 488
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/430 (72%), Positives = 367/430 (85%), Gaps = 5/430 (1%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+ +GGLKD+DRIF NLY + L A K+GDW++TK+L+LKG WI++E+KKSGLR
Sbjct: 26 PKARQYGGLKDQDRIFQNLYDNYGWDLASARKQGDWYKTKELILKGDTWIIDEIKKSGLR 85
Query: 110 GRGGAGFPSGLKWSFMP----KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
GRGGAGFPSGLKWSFM + ++G P YLVVNADE EPGTCKDREIMR DPHKL+EGC
Sbjct: 86 GRGGAGFPSGLKWSFMNPPGWEKNEG-PRYLVVNADEGEPGTCKDREIMRKDPHKLVEGC 144
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
L+AG M A+AAYIYIRGE+ NE L+ A EAYAAGL+GK+ACGSGYDFDV+IH G G
Sbjct: 145 LLAGRAMNATAAYIYIRGEFYNEAAVLQTAINEAYAAGLIGKDACGSGYDFDVYIHRGMG 204
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AY+CGEET+L+ESLEGK GKPRLKPPFPA GL+G P+TVTNVETVAV+PTILRRG DWF
Sbjct: 205 AYVCGEETSLIESLEGKAGKPRLKPPFPAGVGLFGRPSTVTNVETVAVAPTILRRGGDWF 264
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
ASFGR+ NSGTKLFC+SG+VN+PCTVEEEMSIPL+EL+++HCGG++GGWDNLL VIPGG
Sbjct: 265 ASFGRERNSGTKLFCISGNVNEPCTVEEEMSIPLRELLEKHCGGIKGGWDNLLGVIPGGC 324
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
SVP+LPK+IC+DVLMD+DALK VQSGLGTAAVIV++K DV+ AI R + FYKHESCGQC
Sbjct: 325 SVPILPKNICEDVLMDFDALKDVQSGLGTAAVIVINKQQDVIRAIQRFAAFYKHESCGQC 384
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREGT WL M+R + G AK EIDML E+TK IEGHTICALGDAAAWP+QGLIR+F
Sbjct: 385 TPCREGTTWLLKAMDRFRTGQAKEREIDMLYELTKDIEGHTICALGDAAAWPIQGLIRNF 444
Query: 466 RPELERRIKE 475
RPE+E R+K+
Sbjct: 445 RPEMETRMKK 454
>gi|294083716|ref|YP_003550473.1| NADH-quinone oxidoreductase subunit F [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663288|gb|ADE38389.1| NADH-quinone oxidoreductase, F subunit [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 430
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/416 (73%), Positives = 353/416 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD DRIFTN+YG +D L GA KRGDW T ++ G IV +K SGLRGRGGAGFP
Sbjct: 2 LKDADRIFTNIYGWNDAMLAGAKKRGDWDNTAAILKLGHGEIVERMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMP+ RP YLVVNADESEPGTCKDR+I+RH+PHKLLEGC++AG MRA A
Sbjct: 62 TGLKWSFMPQEVRDRPHYLVVNADESEPGTCKDRDIIRHEPHKLLEGCVVAGFAMRAHVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+VNE + L+ A EAY AGLLGKNA SG+DFD+++H GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFVNEARRLQAAIDEAYDAGLLGKNAAKSGWDFDIYLHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG DWFA G++NN+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGSDWFAGLGKENNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEEEM IPLKEL+++H GGVRGGWDNLLAVIPGGSS P++PK C+
Sbjct: 242 LFCISGHVNKPCNVEEEMGIPLKELLEKHAGGVRGGWDNLLAVIPGGSSTPMMPKDTCET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+DAL+ +GLGTA VIVMDKSTDVV AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 MTMDFDALREAGTGLGTAGVIVMDKSTDVVKAISRLSYFYKHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+MERL G A+ EID L EVTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+ERRI
Sbjct: 362 MMERLVRGEAEPHEIDTLYEVTKQVEGHTICALGDAAAWPIQGLIKHFRPEIERRI 417
>gi|146077013|ref|XP_001463061.1| putative NADH-ubiquinone oxidoreductase, mitochondrial [Leishmania
infantum JPCM5]
gi|398010174|ref|XP_003858285.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative [Leishmania
donovani]
gi|134067143|emb|CAM65408.1| putative NADH-ubiquinone oxidoreductase, mitochondrial [Leishmania
infantum JPCM5]
gi|322496491|emb|CBZ31561.1| NADH-ubiquinone oxidoreductase, mitochondrial, putative [Leishmania
donovani]
Length = 481
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/424 (73%), Positives = 360/424 (84%), Gaps = 1/424 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G LKD+DRIFTNLY + A +RGDW+RTKD++LKG DW++NE+K SGLRGRGGAG
Sbjct: 18 GHLKDQDRIFTNLYNDFGTGIDAAERRGDWYRTKDILLKGHDWVINEIKASGLRGRGGAG 77
Query: 116 FPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
FPSGLKWSFMPK D RPSY+VVN DESEPGTCKDREIMRH+PHK++EG L+AG MRA
Sbjct: 78 FPSGLKWSFMPKKKQDDRPSYIVVNCDESEPGTCKDREIMRHEPHKVVEGALLAGFAMRA 137
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
YIYIRGE+ NE +++E+A EAY G LGKNACGSG++FD++ + GAGAYICGEETA
Sbjct: 138 RYGYIYIRGEFYNEWRSVEKAIHEAYEKGYLGKNACGSGWNFDLYTYRGAGAYICGEETA 197
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
++ S+EG QGKPRLKPPFPAN GLYGCPTTVTN ETVAVSPTI+RRGP WFA FGRK N+
Sbjct: 198 MIASIEGGQGKPRLKPPFPANVGLYGCPTTVTNCETVAVSPTIIRRGPQWFAQFGRKGNA 257
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFC+SGHVN+PCTVEEEMS+PL+ELI+RH GGVRGGWDNLL VIPGGSS PL+PKHI
Sbjct: 258 GTKLFCISGHVNRPCTVEEEMSMPLRELIERHAGGVRGGWDNLLCVIPGGSSCPLIPKHI 317
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CD++LMDYDALK Q+GLGTAAVIVMDKSTDV++AI RLS FY HESCGQCTPCREG+ W
Sbjct: 318 CDNILMDYDALKEAQTGLGTAAVIVMDKSTDVINAIERLSQFYMHESCGQCTPCREGSPW 377
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
L +M+R GNAK EEI L +V+KQ+EG +ICALG AAAWPVQGLIRHF+P +E RI+
Sbjct: 378 LDKMMKRFVNGNAKKEEIYTLWDVSKQMEGRSICALGTAAAWPVQGLIRHFKPLMEERIE 437
Query: 475 EHAE 478
E
Sbjct: 438 RFWE 441
>gi|302407582|ref|XP_003001626.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Verticillium
albo-atrum VaMs.102]
gi|261359347|gb|EEY21775.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Verticillium
albo-atrum VaMs.102]
gi|346970835|gb|EGY14287.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Verticillium dahliae
VdLs.17]
Length = 477
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/431 (71%), Positives = 360/431 (83%), Gaps = 3/431 (0%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
++ +GGLKD DRIF NL G P L A K GDWH+TK+++ KG +WI++EVK SGLRGR
Sbjct: 22 RSSYGGLKDSDRIFQNLNGRLPPTLASAKKMGDWHKTKEILAKGHEWIISEVKASGLRGR 81
Query: 112 GGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
GGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+A
Sbjct: 82 GGAGFPSGLKWSFMNFKDWDKDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVA 141
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
G M A+AAYIYIRGE+ +E L+ A EAY GL+GKNACGSGYDFDV++H GAGAY+
Sbjct: 142 GRAMNATAAYIYIRGEFYHEAAVLQTAINEAYKDGLIGKNACGSGYDFDVYVHRGAGAYV 201
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
CGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TV NVET+AV+PTI RRG +WFA F
Sbjct: 202 CGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETIAVAPTICRRGGNWFAGF 261
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
GR+ N GTKLFC+SGHVN P TVEEEMSIPL+ELI++HCGGVRGGWDNLLAVIPGGSS P
Sbjct: 262 GRERNQGTKLFCISGHVNNPVTVEEEMSIPLRELIEKHCGGVRGGWDNLLAVIPGGSSTP 321
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
+LPK +CD+ LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY HESCGQCTPC
Sbjct: 322 ILPKDVCDNQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYAHESCGQCTPC 381
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
REG+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPE
Sbjct: 382 REGSKWTDQIMKRFEKGQGRPREIDMLQELTKQVEGHTICALGEAFAWPLQGLIRHFRPE 441
Query: 469 LERRIKEHAER 479
LE R+ E+A +
Sbjct: 442 LEARMAEYAAQ 452
>gi|83592895|ref|YP_426647.1| NADH dehydrogenase I subunit F [Rhodospirillum rubrum ATCC 11170]
gi|386349626|ref|YP_006047874.1| NADH dehydrogenase I subunit F [Rhodospirillum rubrum F11]
gi|83575809|gb|ABC22360.1| NADH-quinone oxidoreductase, F subunit [Rhodospirillum rubrum ATCC
11170]
gi|346718062|gb|AEO48077.1| NADH dehydrogenase I subunit F [Rhodospirillum rubrum F11]
Length = 429
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/418 (74%), Positives = 358/418 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG D L GA KRGDW T ++ KG D I+NE+K SGLRGRGGAGFP
Sbjct: 2 LNDKDRIFTNLYGFQDWRLAGARKRGDWDGTGAILAKGRDGIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADE EPGTCKDR++MR DPHKL+EGCLIAG M A A
Sbjct: 62 TGLKWSFMPKDIGERPHYLVVNADEGEPGTCKDRDMMRFDPHKLIEGCLIAGFAMGAHVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ E ++LE A EA AGLLG NACGSG+D +V++H GAGAYICGEETAL++
Sbjct: 122 YIYIRGEFFREAEHLEFAIAEAREAGLLGPNACGSGWDMEVYVHRGAGAYICGEETALIQ 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG WFA GR+NN+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGGAWFAGLGRENNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEEEM IPL+ELID+H GGVRGGWDNLL VIPGG+SVP+LP+ +CDD
Sbjct: 242 VFCISGHVNKPCNVEEEMGIPLRELIDKHAGGVRGGWDNLLGVIPGGASVPVLPRELCDD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+LKAV+SGLGTAAV+VMDKSTD+V AIARLS FY HESCGQCTPCREGTGWL
Sbjct: 302 VLMDFDSLKAVKSGLGTAAVMVMDKSTDIVRAIARLSAFYTHESCGQCTPCREGTGWLSR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+M RL G+A +EEID+L++VT+QIEGHTICALGDAAAWP+QGLIRHFRPE+ERRI E
Sbjct: 362 VMTRLVNGDAAIEEIDVLEQVTRQIEGHTICALGDAAAWPIQGLIRHFRPEIERRIIE 419
>gi|389748202|gb|EIM89380.1| NADH-ubiquinone oxidoreductase [Stereum hirsutum FP-91666 SS1]
Length = 498
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/429 (72%), Positives = 355/429 (82%), Gaps = 3/429 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIFTN Y HD LKGA RGDWHRTKD++LKG WI+ +K SGLRGRGGA
Sbjct: 34 YGGLKDQDRIFTNAYCKHDHGLKGAQSRGDWHRTKDILLKGDSWIIQTMKDSGLRGRGGA 93
Query: 115 GFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM K D RP YLVVNADE EPGTCKDREI+R DPHKL+EGCL+AG
Sbjct: 94 GFPSGLKWSFMNKPGWEKDKRPRYLVVNADEGEPGTCKDREILRGDPHKLIEGCLVAGRA 153
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ E ++++A EAYAAGL+GK+ACGSGY FDV++H GAGAYICGE
Sbjct: 154 MNATAAYIYIRGEFYQEAAHVQQAINEAYAAGLIGKDACGSGYAFDVYLHRGAGAYICGE 213
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGKQGKPRLKPPFPA+ GL+GCP+TV NVETV+V+PTI RRG WFASFGR+
Sbjct: 214 ETALIESIEGKQGKPRLKPPFPADVGLFGCPSTVANVETVSVAPTICRRGGSWFASFGRE 273
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN PC VEEEMSIPLK+L+++HCGGVRGGWDNLL ++PGGSSVP+L
Sbjct: 274 RNQGTKLFCISGHVNNPCVVEEEMSIPLKDLLEKHCGGVRGGWDNLLGIVPGGSSVPILT 333
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K +VLMDYD+LK SGLGT AVIVMDKSTD+V AIAR S FYKHESCGQCTPCREG
Sbjct: 334 KKQSGEVLMDYDSLKDAGSGLGTGAVIVMDKSTDIVKAIARFSSFYKHESCGQCTPCREG 393
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
T W+ +M R G EIDML E+TKQ+EG TICALGDAAAWP+QGL+R FRPE+ER
Sbjct: 394 TTWMMNMMNRFVEGRGHQREIDMLLELTKQVEGRTICALGDAAAWPIQGLMRAFRPEVER 453
Query: 472 RIKEHAERE 480
RI E RE
Sbjct: 454 RIAEFRARE 462
>gi|344923490|ref|ZP_08776951.1| NADH dehydrogenase I subunit F [Candidatus Odyssella
thessalonicensis L13]
Length = 425
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/422 (72%), Positives = 359/422 (85%), Gaps = 1/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L ++DRIFTNLYG L A KRGDW +TKD + KG DW++ EVK SGLRGRGGAGF
Sbjct: 2 LSNQDRIFTNLYGYEPAALASAKKRGDWDKTKDFIAKGRDWVIEEVKNSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +D RPSYLV+NADESEPGTCKDR+I+R++PHKL+EG LIA + A +
Sbjct: 62 TGLKWSFMPK-NDPRPSYLVINADESEPGTCKDRDIIRNEPHKLIEGALIAAFAIGAHSC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY E + L+ A EAYAAGLLGKNA +G+DFD+++H GAGAYICGEE+ALLE
Sbjct: 121 YIYIRGEYYREAEALQTAVDEAYAAGLLGKNAAKTGWDFDLYVHRGAGAYICGEESALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEG++G PRLKPPFPA AGLYGCPTTV NVE++AV PTILRRG WFASFGR NNSGTK
Sbjct: 181 SLEGRKGFPRLKPPFPAMAGLYGCPTTVNNVESIAVVPTILRRGAAWFASFGRPNNSGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEE MS+PL+ELI++H GGVRGGWDNL A+IPGGSSVPLLPK ICD
Sbjct: 241 VFCISGHVNNPCNVEEAMSVPLRELIEKHAGGVRGGWDNLKAIIPGGSSVPLLPKEICDS 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL+ V+SGLGTAAVIVMDKSTDV+ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 301 VLMDFDALREVRSGLGTAAVIVMDKSTDVIKAIARLSKFYMHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MERL G ++ +ID L+EV++QIEGHTICALGDAAAWPVQGLIRHFR ELE RI+ +A
Sbjct: 361 MMERLVKGQGEISDIDKLEEVSRQIEGHTICALGDAAAWPVQGLIRHFRSELEDRIRAYA 420
Query: 478 ER 479
++
Sbjct: 421 KK 422
>gi|339504012|ref|YP_004691432.1| NADH-quinone oxidoreductase subunit NuoF [Roseobacter litoralis Och
149]
gi|338758005|gb|AEI94469.1| NADH-quinone oxidoreductase subunit NuoF [Roseobacter litoralis Och
149]
Length = 431
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/417 (73%), Positives = 352/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YGMHD LKGA RG W T ++ KG DWIV+++K SGLRGRGGAGFP
Sbjct: 2 LNDQDRIFTNIYGMHDRTLKGAQARGHWDGTDAIIKKGRDWIVDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLVEGCLIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY AGL+GKNA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDAGLVGKNAAGSGWDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+SFGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSSFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI+ HCGG+RGGW NL AVIPGGSSVP++P D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIETHCGGIRGGWGNLKAVIPGGSSVPMIPGAQMKD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMD STDV+ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLREQRSGLGTAAVIVMDNSTDVIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+ EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVTGEAEPEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|90417838|ref|ZP_01225750.1| NADH dehydrogenase I, F subunit [Aurantimonas manganoxydans
SI85-9A1]
gi|90337510|gb|EAS51161.1| NADH dehydrogenase I, F subunit [Aurantimonas manganoxydans
SI85-9A1]
Length = 435
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/421 (72%), Positives = 360/421 (85%), Gaps = 3/421 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LKGAMKRG + D++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LNDQDRIFTNIYGLRDKSLKGAMKRGHFDGIADIIGKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLV+NADESEPGTCKDREIMR+DP L+EGC+IAG M A+
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVINADESEPGTCKDREIMRNDPFTLIEGCVIAGFAMGANTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGK-NACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGEY+ ER+ L+RA E Y AGLLG+ N CG +D+D+ +H+GAGAYICGEETALL
Sbjct: 122 YIYVRGEYIRERQALQRAIDECYEAGLLGRDNKCG--WDYDIIVHHGAGAYICGEETALL 179
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN+GT
Sbjct: 180 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGGGWFAGLGRPNNTGT 239
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+C+SGHV +PCTVEEEM IP +ELI++HCGGVRGGWDNLLAVIPGGSSVPL+P
Sbjct: 240 KLYCISGHVEQPCTVEEEMGIPFRELIEKHCGGVRGGWDNLLAVIPGGSSVPLVPAADII 299
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D L+ +++ LGTAAVIVMDKSTD+V AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 300 DAPMDFDGLREIKTSLGTAAVIVMDKSTDIVKAIARISYFYKHESCGQCTPCREGTGWMW 359
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQ+EGHTICALGDAAAWP+QGL+RHFR E+ERRI ++
Sbjct: 360 RVMERMATGNAQKREIDMLLDVTKQVEGHTICALGDAAAWPIQGLVRHFRAEIERRIDDY 419
Query: 477 A 477
+
Sbjct: 420 S 420
>gi|260434174|ref|ZP_05788145.1| NADH oxidoreductase (quinone), f subunit [Silicibacter
lacuscaerulensis ITI-1157]
gi|260418002|gb|EEX11261.1| NADH oxidoreductase (quinone), f subunit [Silicibacter
lacuscaerulensis ITI-1157]
Length = 432
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/418 (74%), Positives = 352/418 (84%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YGMH+ LKGA RG W T DL+ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGMHERTLKGAQARGHWDGTADLIAKGRDWIIQTMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGLLGKNA GSG+DFD+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYDAGLLGKNAAGSGWDFDLFLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI+ HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIETHCGGIRGGWDNLLAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRNDLGSGLGTAAVIVMDKSTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML EVTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGEAELEEIDMLFEVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 419
>gi|332185757|ref|ZP_08387504.1| NADH oxidoreductase (quinone), F subunit [Sphingomonas sp. S17]
gi|332014115|gb|EGI56173.1| NADH oxidoreductase (quinone), F subunit [Sphingomonas sp. S17]
Length = 436
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/420 (73%), Positives = 356/420 (84%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG + AMKRGDW TK L+ G D I++ +K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNLYGYQPWNVDAAMKRGDWDNTKALLELGQDKIIDVIKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK RPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG MRA A
Sbjct: 62 TGMKWSFMPKEPRPDRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALVAGFAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L A EAY G LGKNACGSGYDFDV +H GAGAYICGEETA++
Sbjct: 122 AYIYIRGEYIREAETLFAAVAEAYDRGFLGKNACGSGYDFDVFVHRGAGAYICGEETAMI 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG +WF+SFGR+NN GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGAEWFSSFGRENNKGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHV++PC VEE MSI +ELI+RHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVDRPCVVEESMSISFRELIERHCGGIRGGWDNLLAVIPGGSSVPLVPAAEIM 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LKAV SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 DAPMDFDGLKAVGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER++ G+A + EID L +VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI+E
Sbjct: 362 RVMERMRTGDADVSEIDTLFQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEMERRIRER 421
>gi|443921624|gb|ELU41204.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Rhizoctonia solani
AG-1 IA]
Length = 488
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/431 (73%), Positives = 357/431 (82%), Gaps = 6/431 (1%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
PP K +GGLKD+DRIFTN Y HD LKGA RGDWHRTKD++LKG WI+N+VK+SGL
Sbjct: 24 PPVK-RYGGLKDQDRIFTNAYCRHDHGLKGAQSRGDWHRTKDILLKGDSWIINQVKESGL 82
Query: 109 RGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
RGRGGAGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGC
Sbjct: 83 RGRGGAGFPSGLKWSFMNKPGWEKDKRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGC 142
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
L+AG M ASAAYIYIRGE+ E ++++A EAY AGL+GKNACGSGYDFDV++H GAG
Sbjct: 143 LVAGRAMNASAAYIYIRGEFYQEASHVQQAINEAYRAGLIGKNACGSGYDFDVYVHRGAG 202
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AYICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAVSPTI RRG WF
Sbjct: 203 AYICGEETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVSPTICRRGGAWF 262
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
A FGR N GTKLFC+SGHVN PC +EEEMSIPLK+LI++HCGGV GGWDNLL ++PGGS
Sbjct: 263 AGFGRARNQGTKLFCISGHVNNPCVIEEEMSIPLKDLIEKHCGGVVGGWDNLLGIVPGGS 322
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
SVP+ D MD+D+LK QSGLGT AVIVM+K TDVV AI+R S FYKHESCGQC
Sbjct: 323 SVPIFKPSRHDS--MDFDSLKDAQSGLGTGAVIVMNKQTDVVQAISRFSKFYKHESCGQC 380
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREGT W+ +M RL+ G A EIDML E+TKQ+EG TICALGDAAAWP+QGL+RHF
Sbjct: 381 TPCREGTTWMMNMMARLEHGRAHEREIDMLLELTKQVEGKTICALGDAAAWPIQGLMRHF 440
Query: 466 RPELERRIKEH 476
RPE+ERRI E+
Sbjct: 441 RPEVERRIAEY 451
>gi|312066286|ref|XP_003136198.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Loa loa]
Length = 468
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/430 (70%), Positives = 358/430 (83%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P KT FG L+DEDRIFTNLYG +D LK AMK GDW++TK+++LKG DWI+ E+ SG+R
Sbjct: 25 PRKTKFGSLRDEDRIFTNLYGRYDFRLKSAMKLGDWYKTKEVLLKGQDWIIKEMSASGMR 84
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+G+KWSFM + DGRP YL +NADE EPGTCKDRE++RH PHKL+EG LIAG
Sbjct: 85 GRGGAGFPTGIKWSFMKRPFDGRPKYLCINADEGEPGTCKDREVIRHHPHKLIEGALIAG 144
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE L+ A EAY AG +GKN+C +GY FDV IH GAGAYIC
Sbjct: 145 YAMGARAAYIYIRGEFYNEACILQEAIHEAYKAGFIGKNSCDTGYSFDVFIHRGAGAYIC 204
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTV N+ET+A +P I +RG +W++SFG
Sbjct: 205 GEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVNNIETIASAPAICKRGAEWYSSFG 264
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ N GTKL+C+SGHV PCTVEEEMSIPLKELI+RHCGGV GGWDNL+A+IPGGSSVP+
Sbjct: 265 RERNHGTKLYCISGHVVNPCTVEEEMSIPLKELIERHCGGVIGGWDNLMAIIPGGSSVPM 324
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK IC+ VLMDYDAL AVQ+GLGTAAVIVM+K D+V IARLS+FY+HESCGQCTPCR
Sbjct: 325 IPKDICETVLMDYDALIAVQTGLGTAAVIVMNKEVDIVKCIARLSHFYRHESCGQCTPCR 384
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGT WL +M R G AK EID L E++KQIE HTICALGDAAAWP+QGLIRHFRPE+
Sbjct: 385 EGTKWLNSVMWRFVKGQAKPSEIDSLWEISKQIEAHTICALGDAAAWPIQGLIRHFRPEI 444
Query: 470 ERRIKEHAER 479
E RI ++ +
Sbjct: 445 EHRISDYCAK 454
>gi|304319950|ref|YP_003853593.1| NADH dehydrogenase I subunit F [Parvularcula bermudensis HTCC2503]
gi|303298853|gb|ADM08452.1| NADH dehydrogenase I, F subunit [Parvularcula bermudensis HTCC2503]
Length = 453
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/419 (73%), Positives = 357/419 (85%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG+ DPFL+GA RG W+ TKD++ G DW++ +VK SGLRGRGGAGFP
Sbjct: 23 LQDKDRIFTNLYGLKDPFLEGAKDRGAWNGTKDILDMGIDWVIQQVKDSGLRGRGGAGFP 82
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA MRA A
Sbjct: 83 TGLKWSFMPKEVGERPHYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMRAHAC 142
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L++A EAYAA L+GK+ GYDFD+++ +GAGAYICGEETALLE
Sbjct: 143 YIYIRGEYIFEREQLQKAIDEAYAAKLIGKDNV-HGYDFDLYLSHGAGAYICGEETALLE 201
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTI+RRG DWF FGR+NN GTK
Sbjct: 202 SLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTIIRRGADWFKRFGRENNHGTK 261
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEEEMSIPLK LID HCGGVRGGWDNL AVIPGGSSV LPK ICDD
Sbjct: 262 VFCISGHVNKPCNVEEEMSIPLKTLIDTHCGGVRGGWDNLKAVIPGGSSVRCLPKSICDD 321
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL+ +SGLGTAAVIVMDKSTD+V AIAR+++FYKHESCGQCTPCREGTGW+W
Sbjct: 322 VLMDFDALREHKSGLGTAAVIVMDKSTDMVKAIARIAHFYKHESCGQCTPCREGTGWMWR 381
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A++ EID L +V Q+EGHTICALGDAAAWPVQGLI+HFR E+E +I +
Sbjct: 382 VLVRMSRGEAEMWEIDKLLDVAGQVEGHTICALGDAAAWPVQGLIQHFRHEIEEKITAY 440
>gi|393227932|gb|EJD35592.1| NADH-ubiquinone oxidoreductase [Auricularia delicata TFB-10046 SS5]
Length = 529
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/447 (71%), Positives = 362/447 (80%), Gaps = 12/447 (2%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
R FST +T PP +GGLKD+DRIFTNLY HD +KGA RGDWH+
Sbjct: 6 RGFSTSARRALATVVQEAPP----VRRYGGLKDQDRIFTNLYCRHDHGIKGAQARGDWHK 61
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGR-----PSYLVVN 139
TK+++LKG +WI+ +K SGLRGRGGAGFPSGLKWSFM K +D R P YLVVN
Sbjct: 62 TKEILLKGDNWIIQTIKDSGLRGRGGAGFPSGLKWSFMNKPNWQADKRHVELFPRYLVVN 121
Query: 140 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEA 199
ADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+ E ++E+A EA
Sbjct: 122 ADEGEPGTCKDREIMRGDPHKLVEGCLVAGRAMNATAAYIYIRGEFYQEAAHVEQAIAEA 181
Query: 200 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 259
Y AGLLGK+ACGSGY FDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+
Sbjct: 182 YKAGLLGKDACGSGYAFDVYVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGLF 241
Query: 260 GCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 319
GCP+TV NVETVAV+PTI RRG WFA FGR+ N GTKLFCVSGHVN PC +EEEMSIPL
Sbjct: 242 GCPSTVANVETVAVAPTICRRGAPWFAGFGRERNQGTKLFCVSGHVNNPCVIEEEMSIPL 301
Query: 320 KELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 379
+EL++RHCGG+ GGWDNLL +IPGGSSVP+LP C++VLMDYD+LK QSGLGT AVIV
Sbjct: 302 RELLERHCGGITGGWDNLLGIIPGGSSVPVLPIDKCNEVLMDYDSLKDAQSGLGTGAVIV 361
Query: 380 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 439
MDKSTD+V AIARLS+FYKHESCGQCTPCREGT WL M+RL VG A EIDML E+T
Sbjct: 362 MDKSTDIVAAIARLSHFYKHESCGQCTPCREGTTWLMRTMDRLVVGRAHHREIDMLLELT 421
Query: 440 KQIEGHTICALGDAAAWPVQGLIRHFR 466
KQIEG TICALGDAAAWPVQGL+RHFR
Sbjct: 422 KQIEGRTICALGDAAAWPVQGLMRHFR 448
>gi|84516731|ref|ZP_01004089.1| NADH-quinone oxidoreductase, F subunit [Loktanella vestfoldensis
SKA53]
gi|84509199|gb|EAQ05658.1| NADH-quinone oxidoreductase, F subunit [Loktanella vestfoldensis
SKA53]
Length = 428
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/417 (74%), Positives = 353/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMHD LKGA RG W T D++ KG DWIVNE+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHDRTLKGAQARGHWDGTADIIKKGRDWIVNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLVEGCLIASFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAYAAGL+GKNAC SG+DF++++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYAAGLVGKNACKSGWDFEIYLTHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG WF+ FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGGAWFSGFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEEEMSIP +ELI++HCGG+RGGWDNL AVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEEMSIPFEELIEKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+DALK S LGTAAVIVMD STD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDALKEKGSSLGTAAVIVMDNSTDMIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M RL GNA ++EIDML +VTKQ+EGHTICALGDAAAWP+QGLI++FR E+E RIK
Sbjct: 362 VMARLVEGNASVDEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIKNFRDEIEDRIK 418
>gi|56697615|ref|YP_167984.1| NADH dehydrogenase I subunit F [Ruegeria pomeroyi DSS-3]
gi|56679352|gb|AAV96018.1| NADH-quinone oxidoreductase, F subunit [Ruegeria pomeroyi DSS-3]
Length = 432
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/418 (74%), Positives = 355/418 (84%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMHD LKGAM RG W T ++ KG DWI+ ++K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHDRTLKGAMARGHWDGTAGIIGKGRDWIIQQMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGLLGKNA SG+DFD+++H+GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYDAGLLGKNAAKSGWDFDLYLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI+ HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIETHCGGIRGGWDNLLAVIPGGSSVPCVRGEKMKD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDKSTD+V AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKSTDIVKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+ EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGEAEPEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIK 419
>gi|148555895|ref|YP_001263477.1| NADH dehydrogenase I subunit F [Sphingomonas wittichii RW1]
gi|148501085|gb|ABQ69339.1| NADH-quinone oxidoreductase, F subunit [Sphingomonas wittichii RW1]
Length = 432
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/420 (73%), Positives = 356/420 (84%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG L+ A KRGDW TK L+ +G D I+ ++K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFTNVYGFQPWNLEAARKRGDWDDTKALLARGPDQIIEDIKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSD-GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK GRPS+LV+NADESEPG+CKDREI+RHDPHKL+EG L+AG MRA A
Sbjct: 62 TGMKWSFMPKEPKPGRPSFLVINADESEPGSCKDREIIRHDPHKLIEGALVAGFAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE++ E K L A +EAYAAGLLGKNA GSGYDFDV +H GAGAYICGEETA +
Sbjct: 122 AYIYIRGEFIYEAKVLFAAVEEAYAAGLLGKNAAGSGYDFDVFVHRGAGAYICGEETAQI 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRG WFA GR+ N GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGAAWFAGIGREGNKGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE M IP +ELIDRH GG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVNKPCVVEEAMGIPFRELIDRHAGGIRGGWDNLLAVIPGGSSVPLVPAAQIM 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LKA+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 DAPMDFDGLKALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL+ G A+++EID L +VTKQ+EGHTICALGDAAAWP+QGL+RHFRPE+ERRI+E
Sbjct: 362 RVMERLRTGEARIDEIDTLLDVTKQVEGHTICALGDAAAWPIQGLLRHFRPEVERRIRER 421
>gi|378825582|ref|YP_005188314.1| NADH-quinone oxidoreductase subunit F [Sinorhizobium fredii HH103]
gi|365178634|emb|CCE95489.1| NADH-quinone oxidoreductase, F subunit [Sinorhizobium fredii HH103]
Length = 434
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/419 (73%), Positives = 354/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTN+YG+ D LKGAM RG W TK+L+ KG DWI+NEVK SGLRGRGGAGFP
Sbjct: 2 LRDEDRIFTNIYGLKDKSLKGAMARGHWDGTKELLEKGRDWIINEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMAAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A E Y GLLGKN GYD DV +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQAAIDECYEYGLLGKNN-KLGYDIDVFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG W++SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYSSFGRPNNHGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L+ VSGHVN+PCTVE+ MSIP ELID+HCGG+RGGWDNLLAVIPGGSSVP +P D
Sbjct: 241 LYSVSGHVNRPCTVEDAMSIPFHELIDKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI E+
Sbjct: 361 VMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEQRIDEY 419
>gi|227821623|ref|YP_002825593.1| NADH dehydrogenase I subunit F [Sinorhizobium fredii NGR234]
gi|227340622|gb|ACP24840.1| NADH-quinone oxidoreductase chain F 1 [Sinorhizobium fredii NGR234]
Length = 434
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/419 (73%), Positives = 354/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTN+YG+ D LKGAM RG W TK L+ KG DWI+NEVK SGLRGRGGAGFP
Sbjct: 2 LRDEDRIFTNIYGLKDKSLKGAMARGHWDGTKALLEKGRDWIINEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A+ A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMAANTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A E Y GLLGKN GYD DV +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQAAIDECYEYGLLGKNN-KLGYDIDVFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG W++SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYSSFGRPNNHGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L+ VSGHVN+PCTVE+ MSIP ELID+HCGG+RGGWDNLLAVIPGGSSVP +P D
Sbjct: 241 LYSVSGHVNRPCTVEDAMSIPFHELIDKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI E+
Sbjct: 361 VMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEQRIDEY 419
>gi|150396117|ref|YP_001326584.1| NADH dehydrogenase I subunit F [Sinorhizobium medicae WSM419]
gi|150027632|gb|ABR59749.1| NADH-quinone oxidoreductase, F subunit [Sinorhizobium medicae
WSM419]
Length = 434
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/419 (73%), Positives = 353/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTN+YG+ D LKGAM RG W TK + KG DWI+NEVK SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNIYGLMDKSLKGAMARGHWDGTKQFLEKGRDWIINEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A E YA GLLGKN GYD D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQAAIDECYAYGLLGKNN-KLGYDIDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG W+ SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYTSFGRPNNHGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L+ VSGHVN+PCTVE+ MSIP ELI++HCGG+RGGWDNLLAVIPGGSSVP +P D
Sbjct: 241 LYSVSGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI E+
Sbjct: 361 VMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEKRIDEY 419
>gi|406924851|gb|EKD61509.1| hypothetical protein ACD_54C00206G0003 [uncultured bacterium]
Length = 431
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/417 (73%), Positives = 353/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YGMHD L GA KRG W+ T +++ +G D IV +VK SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGMHDRSLAGAKKRGHWNGTAEIIQRGRDTIVEQVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDREIMRHDPH L+EG LIA M A+
Sbjct: 62 TGLKWSFMPKQSDGRPSYLVINADESEPGTCKDREIMRHDPHTLIEGALIASFAMGANTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A E Y AGLLGKNA SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDECYDAGLLGKNAAKSGWDFDLYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA +GLYGCPTTV NVE++AV PTILRRG DWFASFGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVVPTILRRGSDWFASFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSIPLK+L+D HCGGVRGGW N+ AVIPGGSSVP+L C++
Sbjct: 242 LFGISGHVNNPCVVEEAMSIPLKQLLDEHCGGVRGGWKNIKAVIPGGSSVPMLNAAQCEE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ QSGLGTAAVIVMD+STD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDWLRGAQSGLGTAAVIVMDQSTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML VTKQ+EGHTICALGDAAAWP+QGL+R FR E+E RIK
Sbjct: 362 VMDRLVRGEAELEEIDMLISVTKQVEGHTICALGDAAAWPIQGLVRQFREEIEDRIK 418
>gi|339234825|ref|XP_003378967.1| putative NADH oxidoreductase, F subunit [Trichinella spiralis]
gi|316978440|gb|EFV61427.1| putative NADH oxidoreductase, F subunit [Trichinella spiralis]
Length = 709
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/462 (70%), Positives = 366/462 (79%), Gaps = 30/462 (6%)
Query: 14 SLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHD 73
S + C S + +RS+S S KT FG LKDEDRIFTNLYG HD
Sbjct: 248 SRLVCGSLKFRFCVRSYSVSSEGEKSI-----------KTKFGNLKDEDRIFTNLYGRHD 296
Query: 74 PFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
LKGA+ RGDW++TK+++LKG DWIV E+ KSGLRGRGGAGFP+GLKWSFM K DGRP
Sbjct: 297 WKLKGALSRGDWYKTKEILLKGEDWIVKEITKSGLRGRGGAGFPAGLKWSFMNKPYDGRP 356
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A AAYIYIR
Sbjct: 357 RYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLIAGRAMGARAAYIYIR----------- 405
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
AGL+G+NACG+GYDFDV +H GAGAYICGEETALLES+EGKQGKPRLKPPFP
Sbjct: 406 --------AGLIGRNACGTGYDFDVFVHRGAGAYICGEETALLESIEGKQGKPRLKPPFP 457
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GL+GCPTTVTNVETVAVSPTI RRG WFASFGR+ N GTKLFC+SGHV+ PCTVEE
Sbjct: 458 ADVGLFGCPTTVTNVETVAVSPTICRRGGSWFASFGRERNHGTKLFCISGHVHTPCTVEE 517
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
EMSIPLKELI+RH GGV GGWDNLLAVIPGGSS P++PK IC+DVLMD+DAL ++GLG
Sbjct: 518 EMSIPLKELIERHGGGVIGGWDNLLAVIPGGSSTPVIPKQICNDVLMDFDALIEAKTGLG 577
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
TAAVIVM+K TD+V AIARLS FYKHESCGQCTPCREG WL +M R GN+ EE+D
Sbjct: 578 TAAVIVMNKQTDIVKAIARLSLFYKHESCGQCTPCREGCSWLNKMMWRFVDGNSVPEELD 637
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
M+ E++KQ+EGHTICAL DAAAWPVQGL+RHFRPELE R+K+
Sbjct: 638 MIWELSKQLEGHTICALADAAAWPVQGLVRHFRPELEARMKK 679
>gi|355706851|gb|AES02772.1| NADH dehydrogenase flavoprotein 1, 51kDa [Mustela putorius furo]
Length = 436
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/408 (76%), Positives = 348/408 (85%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRG 110
+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLRG
Sbjct: 29 KKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLRG 88
Query: 111 RGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
RGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 89 RGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGGR 148
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICG
Sbjct: 149 AMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICG 208
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFGR
Sbjct: 209 EETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGR 268
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+
Sbjct: 269 ERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLI 328
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STDVV AIARL FYKHESCGQCTPCRE
Sbjct: 329 PKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDVVKAIARLIEFYKHESCGQCTPCRE 388
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
G W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPV
Sbjct: 389 GVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPV 436
>gi|254469558|ref|ZP_05082963.1| NADH oxidoreductase (quinone), F subunit [Pseudovibrio sp. JE062]
gi|374331778|ref|YP_005081962.1| NADH-quinone oxidoreductase subunit F [Pseudovibrio sp. FO-BEG1]
gi|211961393|gb|EEA96588.1| NADH oxidoreductase (quinone), F subunit [Pseudovibrio sp. JE062]
gi|359344566|gb|AEV37940.1| NADH-quinone oxidoreductase subunit F [Pseudovibrio sp. FO-BEG1]
Length = 433
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/422 (71%), Positives = 359/422 (85%), Gaps = 1/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIFTN+YG+HD L+GA +RG W TK+++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LNDSDRIFTNIYGLHDWGLEGARQRGSWSGTKEIIEKGRDWIIDEMKTSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCL+AG M A AA
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHHLVEGCLLAGFAMGAIAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A +AY AGL+GKN +GYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIRERERLQAAIDQAYDAGLIGKNN-KNGYDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV+PTIL+RG WF+ GR+NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVAPTILKRGGAWFSGIGRENNAGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVNKPCTVEE M I KELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 241 LFCVSGHVNKPCTVEEAMGISFKELIEKHCGGIRGGWDNLLAVIPGGSSVPCVKGEDIRD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S LGTAAVIVMD STD++ AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 AKMDFDGLREVGSSLGTAAVIVMDNSTDIIKAIARLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ G + +EIDML +VTKQ+EGHTICALGDAAAWP+QGLI++FRP +E RI ++
Sbjct: 361 VMERMVKGESSYDEIDMLFKVTKQVEGHTICALGDAAAWPIQGLIKNFRPVIEDRIDQYV 420
Query: 478 ER 479
+
Sbjct: 421 AK 422
>gi|126727150|ref|ZP_01742987.1| NADH-quinone oxidoreductase, F subunit [Rhodobacterales bacterium
HTCC2150]
gi|126703578|gb|EBA02674.1| NADH-quinone oxidoreductase, F subunit [Rhodobacterales bacterium
HTCC2150]
Length = 433
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/417 (73%), Positives = 350/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYGMHD L GA RG W T ++ KG DWIV+E+K SGLRGRGGAGFP
Sbjct: 4 LADKDRIFTNLYGMHDRTLAGAKARGHWDGTAAIIKKGRDWIVDEMKASGLRGRGGAGFP 63
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEPGTCKDREIMRHDPH L+EG L+A M A+
Sbjct: 64 TGLKWSFMPKESDGRPAYLVINADESEPGTCKDREIMRHDPHTLIEGALVASFAMNANTC 123
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A EAYA GLLGKNA SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 124 YIYIRGEFIREREALQNAIDEAYADGLLGKNAAKSGWDFDLYLHHGAGAYICGEETALLE 183
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEG++G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG WF FGR NN+GTK
Sbjct: 184 SLEGRKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGSSWFKGFGRDNNAGTK 243
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI L EL+D+HCGGVRGGW NL AVIPGGSSVPLLP IC D
Sbjct: 244 LFAISGHVNNPCVVEEAMSITLPELLDKHCGGVRGGWGNLKAVIPGGSSVPLLPADICKD 303
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+ +SGLGTAAVIVMD+STDV+ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 304 AIMDFDWLREQRSGLGTAAVIVMDQSTDVIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 363
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+ EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 364 VMDRLVTGEAEPEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 420
>gi|58265992|ref|XP_570152.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Cryptococcus
neoformans var. neoformans JEC21]
gi|57226385|gb|AAW42845.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 534
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/429 (70%), Positives = 361/429 (84%), Gaps = 4/429 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H+GGLKD+DRIFTNL+ HD +KGA+ RGDWH+TKD++LKG W++ VK SGLRGRGG
Sbjct: 71 HYGGLKDQDRIFTNLFCKHDHGIKGALARGDWHKTKDIILKGDAWLIQTVKDSGLRGRGG 130
Query: 114 AGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
AGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 131 AGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGR 190
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A+AAYIYIRGE+ E ++++A EAY AGL+GKNACGSGYDFDV++H GAGAYICG
Sbjct: 191 AMNANAAYIYIRGEFYQEASHVQQAIDEAYKAGLIGKNACGSGYDFDVYLHRGAGAYICG 250
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFASFGR
Sbjct: 251 EETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTIARRGGSWFASFGR 310
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTK+FCVSGHVN PC VEEEMSIPL+EL+++HCGGVRGGW NL ++PGGSSVP++
Sbjct: 311 ERNSGTKVFCVSGHVNNPCVVEEEMSIPLQELLEKHCGGVRGGWQNLKGIVPGGSSVPVV 370
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
+ + LMDYD+LK + LGT AVIVMD STD++ AIAR S FYKHESCGQCTPCRE
Sbjct: 371 NRETSEKCLMDYDSLKDNGTSLGTGAVIVMDNSTDMIAAIARFSKFYKHESCGQCTPCRE 430
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
GT W+ +M+R+ G A+ EIDML E+TKQ+EGHTICALGDAAAWP+QGL+++FRPE+E
Sbjct: 431 GTSWMMNMMDRMVEGRAQEREIDMLLELTKQVEGHTICALGDAAAWPIQGLMKNFRPEVE 490
Query: 471 RRIKE-HAE 478
+R+ + HA+
Sbjct: 491 QRLAQFHAK 499
>gi|134110700|ref|XP_776177.1| hypothetical protein CNBD2240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258845|gb|EAL21530.1| hypothetical protein CNBD2240 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 534
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/429 (70%), Positives = 361/429 (84%), Gaps = 4/429 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H+GGLKD+DRIFTNL+ HD +KGA+ RGDWH+TKD++LKG W++ VK SGLRGRGG
Sbjct: 71 HYGGLKDQDRIFTNLFCKHDHGIKGALARGDWHKTKDIILKGDAWLIQTVKDSGLRGRGG 130
Query: 114 AGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
AGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 131 AGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGR 190
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A+AAYIYIRGE+ E ++++A EAY AGL+GKNACGSGYDFDV++H GAGAYICG
Sbjct: 191 AMNANAAYIYIRGEFYQEASHVQQAIDEAYKAGLIGKNACGSGYDFDVYLHRGAGAYICG 250
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFASFGR
Sbjct: 251 EETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTIARRGGSWFASFGR 310
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTK+FCVSGHVN PC VEEEMSIPL+EL+++HCGGVRGGW NL ++PGGSSVP++
Sbjct: 311 ERNSGTKVFCVSGHVNNPCVVEEEMSIPLQELLEKHCGGVRGGWQNLKGIVPGGSSVPVV 370
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
+ + LMDYD+LK + LGT AVIVMD STD++ AIAR S FYKHESCGQCTPCRE
Sbjct: 371 NRETSEKCLMDYDSLKDNGTSLGTGAVIVMDNSTDMIAAIARFSKFYKHESCGQCTPCRE 430
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
GT W+ +M+R+ G A+ EIDML E+TKQ+EGHTICALGDAAAWP+QGL+++FRPE+E
Sbjct: 431 GTSWMMNMMDRMVEGRAQEREIDMLLELTKQVEGHTICALGDAAAWPIQGLMKNFRPEVE 490
Query: 471 RRIKE-HAE 478
+R+ + HA+
Sbjct: 491 QRLAQFHAK 499
>gi|408379493|ref|ZP_11177087.1| NADH dehydrogenase I subunit F [Agrobacterium albertimagni AOL15]
gi|407746977|gb|EKF58499.1| NADH dehydrogenase I subunit F [Agrobacterium albertimagni AOL15]
Length = 434
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/424 (71%), Positives = 356/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LRDQDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH L+EGC+IA M A A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDREIMRHDPHTLIEGCVIASFAMGAHHA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGE++ ER+ L+ A E Y GLLGKN GYD D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEFMREREALQAAIDECYDYGLLGKNN-KLGYDIDIVVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG W++SFGR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGASWYSSFGRPNNAGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP +P D
Sbjct: 241 LFSISGHVNKPCTVEEAMSITFQELIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD L+ + SGLGTAAVIVMDKSTD+V AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLRELGSGLGTAAVIVMDKSTDIVKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI ++
Sbjct: 361 VMERMVKGNAQKREIDMLFQVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEKRIDQYT 420
Query: 478 EREL 481
+
Sbjct: 421 RNAI 424
>gi|222148279|ref|YP_002549236.1| NADH dehydrogenase I subunit F [Agrobacterium vitis S4]
gi|221735267|gb|ACM36230.1| NADH dehydrogenase I chain F [Agrobacterium vitis S4]
Length = 434
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/424 (71%), Positives = 357/424 (84%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH LLEGC+IAG M A AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDREIMRHDPHTLLEGCVIAGFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D+D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYEYGLLGKNN-KLGWDYDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSFGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEE M I +ELI+RH GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFMISGHVNKPCTVEETMGITFRELIERHAGGIRGGWDNLLAVIPGGASCPVVKAEDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D L+ V+S GTAA+IVMDKSTD++ AIARLS F+KHESCGQCTPCREGTGW+W
Sbjct: 301 VPMDFDGLRDVKSSFGTAAIIVMDKSTDIIKAIARLSQFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E RI ++
Sbjct: 361 VMERMVKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEARIDDYT 420
Query: 478 EREL 481
+ +
Sbjct: 421 RKAM 424
>gi|15965023|ref|NP_385376.1| NADH dehydrogenase I subunit F [Sinorhizobium meliloti 1021]
gi|334315813|ref|YP_004548432.1| NADH-quinone oxidoreductase subunit F [Sinorhizobium meliloti AK83]
gi|384528982|ref|YP_005713070.1| NADH-quinone oxidoreductase subunit F [Sinorhizobium meliloti
BL225C]
gi|384536738|ref|YP_005720823.1| NADH-quinone oxidoreductase subunit F 1 [Sinorhizobium meliloti
SM11]
gi|407720214|ref|YP_006839876.1| NADH-quinone oxidoreductase subunit F 1 [Sinorhizobium meliloti
Rm41]
gi|418402650|ref|ZP_12976158.1| NADH dehydrogenase I subunit F [Sinorhizobium meliloti CCNWSX0020]
gi|7387963|sp|P56912.1|NUOF1_RHIME RecName: Full=NADH-quinone oxidoreductase subunit F 1; AltName:
Full=NADH dehydrogenase I subunit F 1; AltName:
Full=NDH-1 subunit F 1
gi|5650740|emb|CAB51626.1| nuoF1 [Sinorhizobium meliloti]
gi|15074202|emb|CAC45849.1| NADH-quinone oxidoreductase subunit F 1 [Sinorhizobium meliloti
1021]
gi|333811158|gb|AEG03827.1| NADH-quinone oxidoreductase, F subunit [Sinorhizobium meliloti
BL225C]
gi|334094807|gb|AEG52818.1| NADH-quinone oxidoreductase, F subunit [Sinorhizobium meliloti
AK83]
gi|336033630|gb|AEH79562.1| NADH-quinone oxidoreductase subunit F 1 [Sinorhizobium meliloti
SM11]
gi|359503391|gb|EHK75945.1| NADH dehydrogenase I subunit F [Sinorhizobium meliloti CCNWSX0020]
gi|407318446|emb|CCM67050.1| NADH-quinone oxidoreductase subunit F 1 [Sinorhizobium meliloti
Rm41]
Length = 434
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/419 (72%), Positives = 353/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTN+YG+ D L+GAM RG W TK + KG DWI+NEVK SGLRGRGGAGFP
Sbjct: 2 LRDEDRIFTNIYGLKDKSLRGAMARGHWDGTKQFLEKGRDWIINEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A E Y GLLGKN GYD D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQAAIDECYEYGLLGKNN-KLGYDIDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG W+ SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYTSFGRPNNHGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L+ VSGHVN+PCTVE+ MSIP ELI++HCGG+RGGWDNLLAVIPGGSSVP +P D
Sbjct: 241 LYSVSGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI E+
Sbjct: 361 VMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEKRIDEY 419
>gi|89071182|ref|ZP_01158373.1| NADH-quinone oxidoreductase, F subunit [Oceanicola granulosus
HTCC2516]
gi|89043278|gb|EAR49504.1| NADH-quinone oxidoreductase, F subunit [Oceanicola granulosus
HTCC2516]
Length = 428
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/418 (74%), Positives = 355/418 (84%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMHD L GA KRG W T L+ KG +WI+ E+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHDRTLAGAKKRGHWDGTAGLIGKGREWIIEEMKGSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGLLG+NA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYDAGLLGRNAAGSGWDFDLYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG +WFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAEWFAGFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN+PC VEE MSI +ELID+HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAVSGHVNQPCVVEEAMSISFEELIDKHCGGIRGGWDNLLAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKSTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A +EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGDAAVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIK 419
>gi|431910187|gb|ELK13260.1| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Pteropus alecto]
Length = 461
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/428 (73%), Positives = 351/428 (82%), Gaps = 3/428 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RG I+ EVK SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQTRGX---XXXXXXXXXXXILGEVKASGLR 83
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 84 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 143
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 144 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVLRGAGAYIC 203
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 204 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 263
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 264 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVSGGWDNLLAVIPGGSSTPL 323
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCR
Sbjct: 324 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 383
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPEL
Sbjct: 384 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 443
Query: 470 ERRIKEHA 477
E R++ A
Sbjct: 444 EERMQRFA 451
>gi|255724736|ref|XP_002547297.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
gi|15425872|gb|AAK97627.1|AF399714_1 NADH dehydrogenase complex I 51 kDa subunit [Candida tropicalis]
gi|240135188|gb|EER34742.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
Length = 489
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/462 (68%), Positives = 373/462 (80%), Gaps = 15/462 (3%)
Query: 27 LRSFSTQ------GASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAM 80
LR+F Q G +TA+ P P + H GGLKD+DRIF N+YG + LK A
Sbjct: 2 LRNFKIQPRTMVRGLATAADP-----ASIPNRVH-GGLKDQDRIFQNVYGNYGHDLKSAQ 55
Query: 81 KRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLV 137
K GDW++TK+++LKG WI++E+KKSGLRGRGGAGFPSGLKWSFM + P YLV
Sbjct: 56 KMGDWYKTKEIILKGDKWIIDEMKKSGLRGRGGAGFPSGLKWSFMNPPGWEKNVGPRYLV 115
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
VNADE EPGTCKDREI+R DPHKL+EGCL+AG M A+AAYIYIRGE+ NE L+ A
Sbjct: 116 VNADEGEPGTCKDREIIRKDPHKLVEGCLLAGRAMNATAAYIYIRGEFYNETVILQNAIN 175
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
EAY AGL+GKNACGSGYDFDV+IH G GAY+CGEETAL+ES+EGK GKPRLKPPFPA G
Sbjct: 176 EAYKAGLIGKNACGSGYDFDVYIHRGMGAYVCGEETALIESIEGKAGKPRLKPPFPAGVG 235
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
L+G PTTV NVE+V+V+PTILRRG DWFASFGR+ NSGTKLFC+SGHVN+PCTVEEEMSI
Sbjct: 236 LFGRPTTVANVESVSVAPTILRRGGDWFASFGRERNSGTKLFCISGHVNEPCTVEEEMSI 295
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
PLKEL+++HCGG++GGWDNLL VIPGGSSVP++PK CD VLMDYDAL+ V SGLGTAAV
Sbjct: 296 PLKELLEKHCGGIKGGWDNLLGVIPGGSSVPIMPKETCDHVLMDYDALRDVGSGLGTAAV 355
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVM+K TD++ AI R S+FYKHESCGQCTPCREGT WL +M+R G A +EIDM+ E
Sbjct: 356 IVMNKQTDIIRAIQRFSHFYKHESCGQCTPCREGTTWLQRMMDRFYKGQATEKEIDMIFE 415
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
+TK+IEGHTICALGDAAAWPVQGLI+ FRP + RIK+ E+
Sbjct: 416 LTKEIEGHTICALGDAAAWPVQGLIKSFRPVMVDRIKQFQEQ 457
>gi|433613044|ref|YP_007189842.1| NADH-quinone oxidoreductase, F subunit [Sinorhizobium meliloti GR4]
gi|429551234|gb|AGA06243.1| NADH-quinone oxidoreductase, F subunit [Sinorhizobium meliloti GR4]
Length = 434
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/419 (72%), Positives = 353/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTN+YG+ D L+GAM RG W TK + KG DWI+NEVK SGLRGRGGAGFP
Sbjct: 2 LRDEDRIFTNVYGLKDKSLRGAMARGHWDGTKQFLEKGRDWIINEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A E Y GLLGKN GYD D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQAAIDECYEYGLLGKNN-KLGYDIDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG W+ SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYTSFGRPNNHGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L+ VSGHVN+PCTVE+ MSIP ELI++HCGG+RGGWDNLLAVIPGGSSVP +P D
Sbjct: 241 LYSVSGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI E+
Sbjct: 361 VMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEKRIDEY 419
>gi|254569928|ref|XP_002492074.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031871|emb|CAY69794.1| hypothetical protein PAS_chr2-2_0462 [Komagataella pastoris GS115]
gi|308152238|emb|CBI83538.1| NUBM (51 kDa) subunit of mitochondrial NADH:ubiquinone
oxidoreductase (complex I) [Komagataella pastoris]
gi|328351436|emb|CCA37835.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Komagataella
pastoris CBS 7435]
Length = 473
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/428 (70%), Positives = 359/428 (83%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
K F GLKD DRIF N+Y + LK + +RGDW++TK+++LKG +W++NE+K SGLRGR
Sbjct: 13 KRFFSGLKDSDRIFQNVYSKYGEDLKSSQQRGDWYKTKEIILKGHEWLINELKASGLRGR 72
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGFPSGLK+SFMP + P YLVVNADE EPGTCKDREI+R +PHKL+EGCL+AG
Sbjct: 73 GGAGFPSGLKYSFMPPNPNREPQYLVVNADEGEPGTCKDREIIRKEPHKLVEGCLLAGRA 132
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+ NE L+ A EAY AGLLGKNACGSGYDFDV+IH G GAYICGE
Sbjct: 133 MNATAAYIYIRGEFYNEAVALQTAINEAYKAGLLGKNACGSGYDFDVYIHRGMGAYICGE 192
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ES+EGK GKPRLKPPFPA GL+G PTTVTNVETVAV+PTI RR WFASFGR
Sbjct: 193 ETALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVTNVETVAVTPTIFRRSGAWFASFGRD 252
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN+PCTVEE MSIPLKEL+++HCGG++GGWDNLL V+PGGSSVP++P
Sbjct: 253 RNQGTKLFCISGHVNEPCTVEESMSIPLKELLEKHCGGIKGGWDNLLGVVPGGSSVPIMP 312
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
KH+C+DVLMD+DALK V SGLGTAAVIV++K TD++ AI R S FYKHESCGQCTPCREG
Sbjct: 313 KHVCEDVLMDFDALKDVGSGLGTAAVIVLNKQTDIIRAIQRFSAFYKHESCGQCTPCREG 372
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
T +L +M+R G AK +EID++ E++K+IEGHTICALGDAAAWPVQGLI+ FRPE+
Sbjct: 373 TTYLQRMMDRFVTGQAKEKEIDLIYELSKEIEGHTICALGDAAAWPVQGLIKSFRPEMVE 432
Query: 472 RIKEHAER 479
RIK++ +
Sbjct: 433 RIKQYEAK 440
>gi|304391405|ref|ZP_07373347.1| NADH oxidoreductase (quinone), f subunit [Ahrensia sp. R2A130]
gi|303295634|gb|EFL89992.1| NADH oxidoreductase (quinone), f subunit [Ahrensia sp. R2A130]
Length = 434
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/432 (70%), Positives = 358/432 (82%), Gaps = 6/432 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+HD LKGAM RG W TK + G DW++N+ K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLHDKSLKGAMSRGHWSETKQFIANGRDWVINQTKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLV+NADESEPGTCKDR+IMRHDPH L+EGC++AG M A
Sbjct: 62 TGLKWSFMPKEESERPHYLVINADESEPGTCKDRDIMRHDPHTLIEGCVLAGFAMGAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ LE A E Y AGLLGKN +G+D+D+++ +GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALEAAIDECYEAGLLGKNN-KNGWDYDIYVTHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE+VAV PTILRRGP+WFA FG +NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESVAVVPTILRRGPEWFAGFGAENNRGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHV +PCTVEE MSIP +ELI++HCGG+RGGWDNLLAVIPGGSSV ++P D
Sbjct: 241 LFCISGHVERPCTVEEAMSIPFRELIEKHCGGIRGGWDNLLAVIPGGSSVRMVPAEQMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D+L ++SGLGTAAVIVMDK TD++ AIARL+ FYKHESCGQCTPCREGTGW+W
Sbjct: 301 TPMDFDSLSKLKSGLGTAAVIVMDKETDIIRAIARLAAFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ G A+ EIDML +VTKQIEGHTICALGDAAAWP+QGLI HFRPE+E+RI E+
Sbjct: 361 VMERMVEGRAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLITHFRPEMEKRIDEYT 420
Query: 478 ER-----ELLEA 484
R ++LEA
Sbjct: 421 YRSDKDNQVLEA 432
>gi|182679348|ref|YP_001833494.1| NADH dehydrogenase I subunit F [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635231|gb|ACB96005.1| NADH-quinone oxidoreductase, F subunit [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 436
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/420 (73%), Positives = 354/420 (84%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D LKGAM RG W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFTNLYGYGDWGLKGAMARGAWDNTKGLIDKGKDWILNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RPSYLVVNADESEPGTCKDREIMR+DPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKADPARPSYLVVNADESEPGTCKDREIMRNDPHLLIEGCLIASFAMEAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ LE A +AY A L+GKN G+ FD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIFERERLEAAVAQAYEAKLVGKNNI-HGWPFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFG KNN+GTK
Sbjct: 181 SLEGKKGMPRMKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGAKNNAGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNK C VEE MSIP +ELIDRHCGG+RGGWDNLLAVIPGGSSVP +P H D
Sbjct: 241 LFCISGHVNKRCNVEEAMSIPFRELIDRHCGGIRGGWDNLLAVIPGGSSVPCVPAHEIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ ++SGLGTAAVIVMDKSTD+V AIARLS+FYKHESCGQCTPCREGTGWLW
Sbjct: 301 APMDFDTLRGLKSGLGTAAVIVMDKSTDIVRAIARLSHFYKHESCGQCTPCREGTGWLWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M R+ G A+ EIDML +VT +IEGHTICALGDAAAWPVQGLIRHFR E+E++I ++A
Sbjct: 361 VMTRMAEGRAQKREIDMLLDVTTRIEGHTICALGDAAAWPVQGLIRHFRSEIEKKIDQYA 420
>gi|358054046|dbj|GAA99845.1| hypothetical protein E5Q_06548 [Mixia osmundae IAM 14324]
Length = 530
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/474 (67%), Positives = 371/474 (78%), Gaps = 9/474 (1%)
Query: 7 VLSLQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFT 66
+ SL AS R R S S +G +T P PPP K+ GGLKD+DRIFT
Sbjct: 23 IRSLSVASTSRGAQARPS----STQRRGLATVQNPPSQQSTPPPRKSSHGGLKDQDRIFT 78
Query: 67 NLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 126
N Y D LK A RGDWH+TK+++LKG W++ ++K SGLRGRGGAGFPSGLKWSFM
Sbjct: 79 NAYMSGDHGLKAAKSRGDWHKTKEIILKGDSWLIQQIKDSGLRGRGGAGFPSGLKWSFMN 138
Query: 127 K-----VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYI 181
K GRP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG M +AAYIYI
Sbjct: 139 KPGWKEAGQGRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGRAMNTTAAYIYI 198
Query: 182 RGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEG 241
RGE+ E +L++A QEAY GL+GKNACGSGYDFDV++H GAGAYICGEETAL+ESLEG
Sbjct: 199 RGEFYLEAAHLQQAIQEAYKDGLIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEG 258
Query: 242 KQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCV 301
KQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI+RRG WF SFGR+ NSGTKLFC+
Sbjct: 259 KQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTIIRRGAAWFNSFGRERNSGTKLFCI 318
Query: 302 SGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 361
SGHVNKPC VEEEMSIPL+ELI++HCGGV GGWDNLL + PGGSSVP+L + + LMD
Sbjct: 319 SGHVNKPCVVEEEMSIPLRELIEKHCGGVIGGWDNLLGITPGGSSVPVLRRDDSEKALMD 378
Query: 362 YDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 421
+D+L+ +QSGLGT AVIVM+KSTD+++AIAR + FYKHESCGQCTPCREGT W+ +MER
Sbjct: 379 FDSLRDLQSGLGTGAVIVMNKSTDIIEAIARYAKFYKHESCGQCTPCREGTTWMDKMMER 438
Query: 422 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
G A EID LQE+TKQIEGH+ICALGDAAAWPVQ LI+ FRPE+ RI +
Sbjct: 439 FVRGQAHEREIDQLQELTKQIEGHSICALGDAAAWPVQSLIKSFRPEMLERIAQ 492
>gi|389691123|ref|ZP_10180016.1| NADH-quinone oxidoreductase, F subunit [Microvirga sp. WSM3557]
gi|388589366|gb|EIM29655.1| NADH-quinone oxidoreductase, F subunit [Microvirga sp. WSM3557]
Length = 433
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/420 (73%), Positives = 351/420 (83%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG H P LK A RG W TK L+ +G DWIVNE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGFHSPDLKAAKMRGAWDGTKFLLEQGRDWIVNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMR+DPH L+EGCLIA M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREIMRNDPHLLVEGCLIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV ER L+RA EAY A L+GK+ GY FD+++H+GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYVAERHALQRAVDEAYEAKLIGKDNI-HGYPFDLYVHHGAGAYICGEETALIE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+ TILRRG WF+ GR NN GTK
Sbjct: 181 SMEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAGTILRRGAAWFSGIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVNKPC VEE M + +ELIDRHCGG+RGGWDNLL VIPGGSSVP++P H D
Sbjct: 241 LFCVSGHVNKPCNVEEAMGLTFRELIDRHCGGIRGGWDNLLGVIPGGSSVPIVPAHEIAD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ ++SGLGTAAVIVMDKSTD+V AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 AYMDFDTLRNLKSGLGTAAVIVMDKSTDIVRAIARISYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ R+ G A+ EIDML EV+ QIEGHTICALGDAAAWPVQGLIRHFR E+E+RI ++A
Sbjct: 361 VLTRMAEGRAQKREIDMLLEVSTQIEGHTICALGDAAAWPVQGLIRHFRHEIEKRIDDYA 420
>gi|398353160|ref|YP_006398624.1| NADH-quinone oxidoreductase subunit F [Sinorhizobium fredii USDA
257]
gi|390128486|gb|AFL51867.1| NADH-quinone oxidoreductase subunit F [Sinorhizobium fredii USDA
257]
Length = 434
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/419 (72%), Positives = 354/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIFTN+YG+ D L+GAM RG W TK+ + KG DWI+NEVK SGLRGRGGAGFP
Sbjct: 2 LRDEDRIFTNIYGLKDKSLRGAMARGHWDGTKEFLEKGRDWIINEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC++A M A AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVVASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A E Y GLLGKN GYD D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIREREALQAAIDECYDYGLLGKNN-KLGYDIDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG W++SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYSSFGRPNNHGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L+ VSGHVN+PCTVE+ MSIP ELI++HCGG+RGGWDNLLAVIPGGSSVP +P D
Sbjct: 241 LYSVSGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI E+
Sbjct: 361 VMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEQRIDEY 419
>gi|440226240|ref|YP_007333331.1| NADH-quinone oxidoreductase subunit f [Rhizobium tropici CIAT 899]
gi|440037751|gb|AGB70785.1| NADH-quinone oxidoreductase subunit f [Rhizobium tropici CIAT 899]
Length = 434
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/419 (72%), Positives = 355/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDQDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IAG M A+ A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIAGFAMGANTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN G+DFDV +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYDAGLLGKNN-KLGWDFDVFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSFGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN+PCTVEE M I +EL+D+H GGVRGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNRPCTVEETMGITFRELVDKHAGGVRGGWDNLLAVIPGGASCPVVPAADIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V+S GTAA IVMDKSTD++ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLREVKSSFGTAAAIVMDKSTDIIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 VLERMARGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQY 419
>gi|51947517|gb|AAU14243.1| hydrogenosomal NADH dehydrogenase 51 kDa subunit [Nyctotherus
ovalis]
Length = 475
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/426 (70%), Positives = 357/426 (83%), Gaps = 1/426 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
++G + D+DRIF+NLY DPF+ GA+KRGDW+RTKD++ D++++E+KKSGLRGRGG
Sbjct: 31 NYGNISDQDRIFSNLYKDQDPFIDGALKRGDWYRTKDILACPHDFVIDEIKKSGLRGRGG 90
Query: 114 AGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMR 173
AGFPSGLK+SFMPK SDGRPS+LVVNADESEP TCKDREIMRHDPHKL+EG LI G MR
Sbjct: 91 AGFPSGLKYSFMPKKSDGRPSFLVVNADESEPATCKDREIMRHDPHKLVEGALIVGYAMR 150
Query: 174 ASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEET 233
A AAY+YIRGE+ +E LERA EAY G +GKNACGSGYDFD+++H GAGAYICGEET
Sbjct: 151 ARAAYVYIRGEFWDEAMQLERAVAEAYEKGFIGKNACGSGYDFDIYVHRGAGAYICGEET 210
Query: 234 ALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNN 293
++L S+EG GKPR+KPP+PA GLYGCPTTVTNVETV+ PTI+RRG WFASFGRKNN
Sbjct: 211 SMLSSIEGVIGKPRMKPPYPAGTGLYGCPTTVTNVETVSTVPTIMRRGGGWFASFGRKNN 270
Query: 294 SGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKH 353
GTKL+C+SGH+N PCTVE+EMSI L+ELI+RH GGVRGGWDNLL VIPGGSS P++ K
Sbjct: 271 HGTKLYCLSGHINNPCTVEDEMSISLRELIERHGGGVRGGWDNLLGVIPGGSSTPIISKE 330
Query: 354 ICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTG 413
+C+ LMD+D+L S GTA VIV+DKSTDV+DAI RLS FY HESCGQCTPCREGTG
Sbjct: 331 LCETALMDFDSLIEAGSAFGTAGVIVLDKSTDVIDAILRLSKFYLHESCGQCTPCREGTG 390
Query: 414 WLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
WL I+ER+K+G A EID L E+TKQIEGHTICALG+AAAWPVQGLI+H+R +E RI
Sbjct: 391 WLVDILERMKIGKADYGEIDQLYELTKQIEGHTICALGEAAAWPVQGLIKHYRDVIEDRI 450
Query: 474 -KEHAE 478
K H+E
Sbjct: 451 DKYHSE 456
>gi|224009243|ref|XP_002293580.1| hypothetical protein THAPSDRAFT_29850 [Thalassiosira pseudonana
CCMP1335]
gi|220970980|gb|EED89316.1| hypothetical protein THAPSDRAFT_29850 [Thalassiosira pseudonana
CCMP1335]
Length = 499
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/421 (73%), Positives = 353/421 (83%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGL D+DRIFTNLYG D LK A+KRGD+H TK+++ G DWIV E+K SGLRGRGGA
Sbjct: 41 YGGLSDQDRIFTNLYGEQDWRLKDALKRGDYHLTKEMMWMGPDWIVQEIKDSGLRGRGGA 100
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK SDGRPS+LVVNADESEPGTCKDREIMR DPHKL+EGCLIAG MRA
Sbjct: 101 GFPSGLKWSFMPKESDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCLIAGYAMRA 160
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGEY NE L+ A EAYAAGL+GKNACGSGYDFDV++H GAGAYICGEETA
Sbjct: 161 RAAYIYIRGEYFNEAVVLDEAIHEAYAAGLIGKNACGSGYDFDVYLHRGAGAYICGEETA 220
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEG+QGKPRLKPPFPA GL+GCP+TVTNVETVAVSPTILRRG WFA FG NN
Sbjct: 221 LIESLEGRQGKPRLKPPFPAGVGLFGCPSTVTNVETVAVSPTILRRGASWFAGFGNPNNR 280
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHV P VEE MSIPL+ELI++HCGG+R GWD L A IPGGSSVP+L K
Sbjct: 281 GTKLFAISGHVKNPIVVEESMSIPLQELIEKHCGGMRNGWDTLQACIPGGSSVPVLNKAQ 340
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CD+ LM++D L+A SGLGTAAV + D S D+V AI RLS+FYKHESCGQCTPCREGT W
Sbjct: 341 CDEALMEFDDLRAKGSGLGTAAVTMFDNSVDMVGAIRRLSHFYKHESCGQCTPCREGTSW 400
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
L I+ R++ G+A EI ML+E+++QIEGHTICALGDAAAWPVQGL+RHF+ ++E RI
Sbjct: 401 LEDILIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQGLLRHFKKDIEDRID 460
Query: 475 E 475
+
Sbjct: 461 D 461
>gi|217979054|ref|YP_002363201.1| NADH dehydrogenase I subunit F [Methylocella silvestris BL2]
gi|217504430|gb|ACK51839.1| NADH-quinone oxidoreductase, F subunit [Methylocella silvestris
BL2]
Length = 436
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/420 (73%), Positives = 351/420 (83%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D LKGA+ RG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFTNLYGFGDWGLKGALARGAWDNTKGLIEKGKDWILTEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RPSYLVVNADESEPGTCKDREIMR+DPH L+EGC +A M A A
Sbjct: 62 TGLKWSFMPKADAARPSYLVVNADESEPGTCKDREIMRNDPHLLVEGCFVASFAMEAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E LE A Q+AY AGL+GK+ G+ FD+++H GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYILEADRLEAAIQQAYEAGLVGKDNI-HGWPFDIYVHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFG KNNSGTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSFGAKNNSGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEE MSIP +ELID+HCGGVRGG DNLLAVIPGGSSVP +P D
Sbjct: 241 LFCISGHVNKPCNVEEAMSIPFRELIDKHCGGVRGGSDNLLAVIPGGSSVPCVPAAQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ ++SGLGTAAVIVMDKSTD++ AIARLSYFYKHESCGQCTPCREGTGWLW
Sbjct: 301 AAMDFDTLRDLKSGLGTAAVIVMDKSTDIIRAIARLSYFYKHESCGQCTPCREGTGWLWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ R+ G A+ EIDML EVT QIEGHTICALGDAAAWPVQGLIRHFRPE+E+RI ++A
Sbjct: 361 VVTRMAEGRAQKREIDMLLEVTTQIEGHTICALGDAAAWPVQGLIRHFRPEIEKRIDQYA 420
>gi|405120084|gb|AFR94855.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Cryptococcus
neoformans var. grubii H99]
Length = 495
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/429 (70%), Positives = 361/429 (84%), Gaps = 4/429 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H+GGLKD+DRIFTNL+ HD +KGA+ RGDWH+TKD++LKG W++ VK SGLRGRGG
Sbjct: 32 HYGGLKDQDRIFTNLFCKHDHGIKGALARGDWHKTKDIILKGDAWLIQTVKDSGLRGRGG 91
Query: 114 AGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGV 170
AGFPSGLKWSFM K D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 92 AGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGR 151
Query: 171 GMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICG 230
M A+AAYIYIRGE+ E ++++A EAY AGL+GKNACGSGYDFDV++H GAGAYICG
Sbjct: 152 AMNANAAYIYIRGEFYQEASHVQQAIDEAYKAGLIGKNACGSGYDFDVYLHRGAGAYICG 211
Query: 231 EETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 290
EETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFASFGR
Sbjct: 212 EETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVANVETVAVAPTIARRGGSWFASFGR 271
Query: 291 KNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
+ NSGTK+FCVSGHVN PC VEEEMSIPL+EL+++HCGGVRGGW NL ++PGGSSVP++
Sbjct: 272 ERNSGTKVFCVSGHVNNPCVVEEEMSIPLQELLEKHCGGVRGGWQNLKGIVPGGSSVPVV 331
Query: 351 PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 410
+ + LMDYD+LK + LGT AVIVMD STD++ AIAR S FYKHESCGQCTPCRE
Sbjct: 332 NRETSEKCLMDYDSLKDNGTSLGTGAVIVMDNSTDMIAAIARFSKFYKHESCGQCTPCRE 391
Query: 411 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELE 470
GT W+ +M+R+ G A+ EIDML E+TKQ+EGHTICALGDAAAWP+QGL+++FRPE+E
Sbjct: 392 GTSWMMNMMDRMVEGRAQEREIDMLLELTKQVEGHTICALGDAAAWPIQGLMKNFRPEVE 451
Query: 471 RRIKE-HAE 478
+R+ + HA+
Sbjct: 452 QRLAQFHAK 460
>gi|407798874|ref|ZP_11145777.1| NuoF [Oceaniovalibus guishaninsula JLT2003]
gi|407059222|gb|EKE45155.1| NuoF [Oceaniovalibus guishaninsula JLT2003]
Length = 429
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/417 (74%), Positives = 350/417 (83%), Gaps = 1/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD DRIFTNLYGM+D L GA RG W T DL+ KG DWIV E+K SGLRGRGGAGFP
Sbjct: 2 LKDSDRIFTNLYGMYDRSLAGAKARGAWDGTADLIGKGRDWIVQEMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHVC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A AY GLLG NA GSG+DFD+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDAAYDDGLLGPNAAGSGWDFDLYVAHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG WFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGASWFAGFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC-D 356
LF +SGHVN+PC VEEEMSI +ELIDRHCGG+RGGWDNL AVIPGGSSVPLLP I D
Sbjct: 242 LFAISGHVNRPCVVEEEMSITFRELIDRHCGGIRGGWDNLKAVIPGGSSVPLLPGRIMQD 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ +MD+D L+ +SGLGTAAVIVMD+STDV+ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 EAIMDFDWLREQKSGLGTAAVIVMDQSTDVIKAIWRLAAFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+MERL G+A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RI
Sbjct: 362 RVMERLVKGDAEPAEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRHEIEDRI 418
>gi|321258005|ref|XP_003193778.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Cryptococcus gattii
WM276]
gi|317460248|gb|ADV21991.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, putative
[Cryptococcus gattii WM276]
Length = 495
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/473 (65%), Positives = 373/473 (78%), Gaps = 18/473 (3%)
Query: 10 LQRASLVRCYSERLSVGLRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLY 69
L R L+R ++ RS +T + H+GGLKD+DRIFTNL+
Sbjct: 2 LSRTPLLRSSPRTITAARRSLATVSDAPVR--------------HYGGLKDQDRIFTNLF 47
Query: 70 GMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK-- 127
HD +KGA+ RGDWH+TKD++LKG WI+ VK SGLRGRGGAGFPSGLKWSFM K
Sbjct: 48 CKHDHGIKGALARGDWHKTKDIILKGDAWIIQTVKDSGLRGRGGAGFPSGLKWSFMNKPG 107
Query: 128 -VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYV 186
D RP YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+
Sbjct: 108 WEKDPRPRYLVVNADEGEPGTCKDREIMRGDPHKLVEGCLVAGRAMNANAAYIYIRGEFY 167
Query: 187 NERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 246
E ++++A EAY AGL+GKNACGSGYDFDV++H GAGAYICGEETAL+ES+EGKQGKP
Sbjct: 168 QEASHVQQAIDEAYKAGLIGKNACGSGYDFDVYLHRGAGAYICGEETALIESIEGKQGKP 227
Query: 247 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVN 306
RLKPPFPA+ GL+GCPTTV NVETVAV+PTI RRG WFASFGR+ NSGTK++CVSGHVN
Sbjct: 228 RLKPPFPADVGLFGCPTTVANVETVAVAPTIARRGGSWFASFGRERNSGTKVYCVSGHVN 287
Query: 307 KPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 366
PC VEEEMSIPL+EL+++HCGGVRGGW NL ++PGGSSVP++ + + LMDYD+LK
Sbjct: 288 NPCVVEEEMSIPLQELLEKHCGGVRGGWQNLKGIVPGGSSVPVITRETSEKCLMDYDSLK 347
Query: 367 AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGN 426
+ LGT AVIVMD +TD++ AIAR S FYKHESCGQCTPCREGT W+ +M+R+ G
Sbjct: 348 DNGTSLGTGAVIVMDNTTDMIAAIARFSKFYKHESCGQCTPCREGTSWMMNMMDRMVEGR 407
Query: 427 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE-HAE 478
A+ EIDML E+TKQ+EGHTICALGDAAAWP+QGL+++FRPE+E+R+ + HA+
Sbjct: 408 AQEREIDMLLELTKQVEGHTICALGDAAAWPIQGLMKNFRPEVEQRLAQFHAK 460
>gi|84502613|ref|ZP_01000732.1| NADH-quinone oxidoreductase, F subunit [Oceanicola batsensis
HTCC2597]
gi|84389008|gb|EAQ01806.1| NADH-quinone oxidoreductase, F subunit [Oceanicola batsensis
HTCC2597]
Length = 430
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/418 (73%), Positives = 354/418 (84%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YGMHD L+GA RG W T D++ KG DWI++++K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGMHDRTLQGARDRGHWDGTADIIKKGRDWIIDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGLLG NA SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYDAGLLGANAAKSGWDFDLYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFAGFGRENNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAVSGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGEKMKD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDK TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKQTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A +EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR +E RIK
Sbjct: 362 RVMDRLVKGEASVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDVIEDRIK 419
>gi|254512379|ref|ZP_05124446.1| NADH oxidoreductase (quinone), F subunit [Rhodobacteraceae
bacterium KLH11]
gi|221536090|gb|EEE39078.1| NADH oxidoreductase (quinone), F subunit [Rhodobacteraceae
bacterium KLH11]
Length = 433
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/418 (73%), Positives = 351/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YGMH+ LKGA RG W T L+ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 3 LKDQDRIFTNIYGMHERTLKGAQARGHWDGTAGLINKGRDWIIQTMKDSGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 63 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHTC 122
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A EAY AGLLGKNA GSG+DFD+ +H+GAGAYICGEETAL+E
Sbjct: 123 YIYLRGEYIREREALQAAIDEAYDAGLLGKNAAGSGWDFDLFLHHGAGAYICGEETALIE 182
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR+NN+GTK
Sbjct: 183 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAGFGRQNNAGTK 242
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI ++LI+ HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 243 LFAISGHVNNPCVVEEAMSISFEDLIETHCGGIRGGWDNLLAVIPGGSSVPCVRGENMRD 302
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 303 AIMDFDYLRGELGSGLGTAAVIVMDKSTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 362
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 363 RVMDRLVRGEAELEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 420
>gi|383644206|ref|ZP_09956612.1| NADH dehydrogenase I subunit F [Sphingomonas elodea ATCC 31461]
Length = 434
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/419 (74%), Positives = 358/419 (85%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG L A RG W TK L+ G D I++ +K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGYQSWHLDAARARGAWDNTKALLDLGPDTIIDRIKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK + RPS+LV+NADESEPG+CKDREI+RHDPH L+EG L+AG MRA A
Sbjct: 62 TGMKWSFMPKNPTPERPSFLVINADESEPGSCKDREIIRHDPHLLIEGALVAGFAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L A EAYAAGLLGKNACGSGYDFDV +H GAGAYICGEETA++
Sbjct: 122 AYIYIRGEYIREAETLFAAVAEAYAAGLLGKNACGSGYDFDVFVHRGAGAYICGEETAMI 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV+PTILRRGP+WFASFG +NN GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGPEWFASFGNENNKGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE MSIP +ELI++HCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVNKPCVVEEAMSIPFRELIEKHCGGIRGGWDNLLAVIPGGSSVPLVPAAQIM 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D L+A+ SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 DCPMDFDGLRALGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+MERL+ G+A + EID LQ+VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+ERRI E
Sbjct: 362 RVMERLRTGDADISEIDTLQQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIERRITE 420
>gi|365855587|ref|ZP_09395632.1| NADH oxidoreductase, F subunit [Acetobacteraceae bacterium AT-5844]
gi|363719014|gb|EHM02333.1| NADH oxidoreductase, F subunit [Acetobacteraceae bacterium AT-5844]
Length = 446
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/424 (72%), Positives = 356/424 (83%), Gaps = 2/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+H LK AM+RG+W T L+ KG DWI+ EVK+SGLRGRGGAGFP
Sbjct: 3 LSDKDRIFTNLYGLHPWNLKDAMRRGNWDGTAALIAKGRDWIIEEVKQSGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK + DGRPSYLVVN DESEPGTCKDR+I+RHDPH L+EGCL+AGV M A A
Sbjct: 63 TGMKWSFMPKENPDGRPSYLVVNCDESEPGTCKDRDIIRHDPHTLIEGCLLAGVAMGAHA 122
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY RGEY NE L A +EAY AGL+GKNACGSG+DFD+++H GAGAYICGEETAL+
Sbjct: 123 GYIYCRGEYYNEHLVLMAAIEEAYEAGLIGKNACGSGWDFDLYVHRGAGAYICGEETALI 182
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G PRLKPPFPA GLYGCPTTV NVET+AV P ILRRG WFASFGR NSGT
Sbjct: 183 ESLEGKKGMPRLKPPFPAAVGLYGCPTTVNNVETIAVVPEILRRGGSWFASFGRPKNSGT 242
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+ GHVNKPC VE EMSIP++ELI+R+ GGVRGGWDNLLAVIPGGSS PLLPKHICD
Sbjct: 243 KVFCIQGHVNKPCNVEAEMSIPMRELIERYAGGVRGGWDNLLAVIPGGSSTPLLPKHICD 302
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
DVLMD+DAL+ ++GLGTA VIVMDKSTD++ AIARL+ FYKHESCGQCTPCREG GW
Sbjct: 303 DVLMDFDALREHKTGLGTAGVIVMDKSTDLIKAIARLAAFYKHESCGQCTPCREGMGWQK 362
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE- 475
+M+R+ G A++ EID+L+ VT+QIEGHTICAL D WPVQGLIRHFRP +E RI
Sbjct: 363 RLMDRMVEGRAEVAEIDVLESVTRQIEGHTICALADGGVWPVQGLIRHFRPMMEERIAAY 422
Query: 476 HAER 479
HA++
Sbjct: 423 HAKK 426
>gi|220924010|ref|YP_002499312.1| NADH dehydrogenase subunit I F [Methylobacterium nodulans ORS 2060]
gi|219948617|gb|ACL59009.1| NADH-quinone oxidoreductase, F subunit [Methylobacterium nodulans
ORS 2060]
Length = 433
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/420 (72%), Positives = 351/420 (83%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG H P L A KRG W TK L+ +G DWIV E+K+SGLRGRGGAGF
Sbjct: 2 LSDQDRIFTNLYGFHSPGLDAARKRGAWDGTKFLLEQGRDWIVEEMKRSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A AA
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLLASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E+ L+RA EAY A L+G++ GY FD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYVAEKHALQRAVDEAYEARLIGQDNV-HGYPFDLYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+ ILRRG +WFA GR NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAGAILRRGAEWFAGIGRPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVN+PC VEE + IP +ELIDRHCGG+RGGWDNLL VIPGGSSVPL+P D
Sbjct: 241 LFCVSGHVNRPCNVEEALGIPFRELIDRHCGGIRGGWDNLLCVIPGGSSVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ +QSGLGTAAV+V+DKSTD+V AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 APMDFDTLRGLQSGLGTAAVMVLDKSTDIVSAIARISYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M R+ G A+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIRHFRPE+E+RI ++
Sbjct: 361 VMLRMAEGRAQKREIDMLLDVTKQIEGHTICALGDAAAWPIQGLIRHFRPEIEKRIDRYS 420
>gi|294677060|ref|YP_003577675.1| NADH-quinone oxidoreductase subunit F [Rhodobacter capsulatus SB
1003]
gi|7387959|sp|O07948.1|NUOF_RHOCA RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|1938240|emb|CAA71232.1| complex I 51kDa subunit [Rhodobacter capsulatus]
gi|2182080|emb|CAA71013.1| NADH:ubiquinone oxidoreductase 47 kD complex I subunit [Rhodobacter
capsulatus]
gi|3282565|gb|AAC24991.1| NUOF [Rhodobacter capsulatus]
gi|294475880|gb|ADE85268.1| NADH-quinone oxidoreductase, F subunit [Rhodobacter capsulatus SB
1003]
Length = 431
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/417 (71%), Positives = 347/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIFTN+YGMHD LKGAM RG W T ++ G DWI+ +VK SGLRGRGGAGFP
Sbjct: 2 LNDHDRIFTNIYGMHDRSLKGAMARGHWDGTAAILGNGRDWIIEQVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPS+LV+NADESEPGTCKDREIMRHDPH L+EG LIAG M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPSFLVINADESEPGTCKDREIMRHDPHTLIEGALIAGFAMGARAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E++ L+ A E Y AGL+GKNAC S YDFDV++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYVREKEALQAAIDECYEAGLIGKNACRSDYDFDVYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA +GLYGCPTTV NVE++AV PTILRRG WFA GR NN+G K
Sbjct: 182 SLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVVPTILRRGGAWFAGIGRPNNTGVK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +KELI++H GGVRGGW NL AVIPGG+S P++P H+C+D
Sbjct: 242 LFAMSGHVNTPCVVEEAMSISMKELIEKHGGGVRGGWKNLKAVIPGGASCPVIPAHLCED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD ++ QS GTA +IVMD+ TD++ AIARLS F+KHESCGQCTPCREGT W+W
Sbjct: 302 AIMDYDGMREKQSSFGTACLIVMDQQTDIIKAIARLSKFFKHESCGQCTPCREGTSWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+MERL G A++EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRH+R E+E RIK
Sbjct: 362 VMERLVTGEAEVEEIDMLFSVTKQVEGHTICALGDAAAWPIQGLIRHYREEIEDRIK 418
>gi|255262502|ref|ZP_05341844.1| NADH oxidoreductase (quinone), f subunit [Thalassiobium sp. R2A62]
gi|255104837|gb|EET47511.1| NADH oxidoreductase (quinone), f subunit [Thalassiobium sp. R2A62]
Length = 429
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/417 (72%), Positives = 355/417 (85%), Gaps = 1/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTN+YGMHD LKGA KRG W T ++ G DWI++++K SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNIYGMHDRSLKGAQKRGHWDGTAKIIKNGRDWIIDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY AGL+GKNA +G+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDAGLVGKNAAKTGWDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEEEMSI +ELI++HCGG+RGGWDNL AVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEEMSISFEELIEKHCGGIRGGWDNLKAVIPGGSSVPCVRGEHMKD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMD+STD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDQSTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+M+RL G+A EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RI
Sbjct: 362 RVMDRLVKGDADPEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRI 418
>gi|312371261|gb|EFR19494.1| hypothetical protein AND_22330 [Anopheles darlingi]
Length = 1009
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/397 (74%), Positives = 339/397 (85%)
Query: 47 PPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKS 106
PPP +T FGGL D+DRIFTNLYG HD LKGA+KRGDW++TK+++LKG DWI+NE+K S
Sbjct: 50 PPPQTRTKFGGLADQDRIFTNLYGRHDWRLKGALKRGDWYKTKEILLKGTDWILNEIKVS 109
Query: 107 GLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GLRGRGGAGFP+G+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL
Sbjct: 110 GLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCL 169
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
IAG M A AAYIYIRGE+ NE N++ A EAY AGL+GKNACGSGYDFDV +H GAGA
Sbjct: 170 IAGKAMGARAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGSGYDFDVFMHRGAGA 229
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV+NVETVAV+PTI RRG WFA
Sbjct: 230 YICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVSNVETVAVAPTICRRGGVWFA 289
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GG+RGGWDNLL +IPGGSS
Sbjct: 290 GFGRTRNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGIRGGWDNLLGIIPGGSS 349
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P++PK +C+DVLMD+D L Q+ LGTAA+IVMDKSTD++ AI+RL FYKHESCGQCT
Sbjct: 350 TPVIPKSVCEDVLMDFDGLVQAQTSLGTAAIIVMDKSTDIIKAISRLIMFYKHESCGQCT 409
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE 443
PCREG W+ IM R GNA+ EIDML E++KQIE
Sbjct: 410 PCREGIAWMNKIMHRFVAGNARPSEIDMLWEISKQIE 446
>gi|381167339|ref|ZP_09876547.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Phaeospirillum molischianum DSM 120]
gi|380683647|emb|CCG41359.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Phaeospirillum molischianum DSM 120]
Length = 428
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/423 (71%), Positives = 355/423 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D DRIFTNLYG HD L GA RGDW T+DL+ KG DW++ E+K SGLRGRGGAGFP
Sbjct: 3 LRDRDRIFTNLYGFHDWRLSGARARGDWDGTRDLLAKGRDWVIEEMKTSGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPKV RP YLV+NADE EPGTCKDR+I+RH+PHKL+EG LIAG + A
Sbjct: 63 TGVKWSFMPKVEGSRPHYLVINADEGEPGTCKDRDILRHEPHKLVEGALIAGFAIGARVG 122
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
Y+YIRGE+V E +NL+ A EA AAGLLG NACGSG+ F+++IH GAGAYICGEE+AL+E
Sbjct: 123 YVYIRGEFVREAQNLQAAIDEARAAGLLGSNACGSGWPFELYIHRGAGAYICGEESALIE 182
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG WFA+ GR+ NSGTK
Sbjct: 183 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGGAWFAALGRQKNSGTK 242
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEEM I L+ELI+ H GGVRGGWDNLLAVIPGGSSVP+L K ICD
Sbjct: 243 VFCISGHVNTPCNVEEEMGISLRELIETHAGGVRGGWDNLLAVIPGGSSVPVLTKDICDT 302
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+ V+SGLGTAAVIVMDKSTD+V AI+RLS FY HESCGQCTPCREGTGWL
Sbjct: 303 VLMDFDSLRDVRSGLGTAAVIVMDKSTDIVRAISRLSRFYAHESCGQCTPCREGTGWLAR 362
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
IM R+ G+A+ EI+ L ++T+QIEGHTICALGDAAAWP+QGLIR FRPELERRI E
Sbjct: 363 IMARMVTGDAEPHEIERLDQLTRQIEGHTICALGDAAAWPIQGLIRAFRPELERRIAERQ 422
Query: 478 ERE 480
R+
Sbjct: 423 ARD 425
>gi|241951346|ref|XP_002418395.1| NADH dehydrogenase complex I subunit, putative [Candida
dubliniensis CD36]
gi|223641734|emb|CAX43695.1| NADH dehydrogenase complex I subunit, putative [Candida
dubliniensis CD36]
Length = 491
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/427 (72%), Positives = 359/427 (84%), Gaps = 3/427 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
GGLKD+DRIF N+YG + LK A K GDW++TK+++LKG WI++E+KKSGLRGRGGAG
Sbjct: 33 GGLKDQDRIFQNVYGTYGHDLKSAQKMGDWYKTKEIILKGDKWIIDEMKKSGLRGRGGAG 92
Query: 116 FPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
FPSGLKWSFM + P YLVVNADE EPGTCKDREI+R DPHKL+EGCL+AG M
Sbjct: 93 FPSGLKWSFMNPPGWEKNVGPRYLVVNADEGEPGTCKDREIIRKDPHKLVEGCLLAGRAM 152
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
A+AAYIYIRGE+ NE L+ A EAY AGL+GKNACGSGYDFDV+IH G GAYICGEE
Sbjct: 153 NATAAYIYIRGEFYNETVVLQNAINEAYKAGLIGKNACGSGYDFDVYIHRGMGAYICGEE 212
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
TAL+ES+EGK GKPRLKPPFPA GL+G PTTV NVE+V+V+PTILRRG DWFASFGR+
Sbjct: 213 TALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVANVESVSVAPTILRRGGDWFASFGRER 272
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
NSGTKLFC+SGHVN+PCTVEEEMSIPLKEL+++HCGG+ GGWDNLL VIPGGSSVP++PK
Sbjct: 273 NSGTKLFCISGHVNEPCTVEEEMSIPLKELLEKHCGGIVGGWDNLLGVIPGGSSVPIMPK 332
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
CD+VLMDYDAL+ V SGLGTAAVIVM+K TD++ AI R S+FYKHESCGQCTPCREGT
Sbjct: 333 ETCDNVLMDYDALRDVGSGLGTAAVIVMNKQTDIIRAIQRFSHFYKHESCGQCTPCREGT 392
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
WL +M+R G A +EIDM+ E+TK+IEGHTICALGDAAAWPVQGLI+ FRP + R
Sbjct: 393 TWLQRMMDRFYTGQATEKEIDMIFELTKEIEGHTICALGDAAAWPVQGLIKSFRPVMVDR 452
Query: 473 IKEHAER 479
IKE ++
Sbjct: 453 IKEFQQK 459
>gi|50424275|ref|XP_460724.1| DEHA2F08360p [Debaryomyces hansenii CBS767]
gi|49656393|emb|CAG89064.1| DEHA2F08360p [Debaryomyces hansenii CBS767]
Length = 487
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/432 (71%), Positives = 362/432 (83%), Gaps = 4/432 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P + H GGLKD+DRIF N+Y + LK A K GDW++TK+++LKG WI++E+KKSGLR
Sbjct: 25 PNRVH-GGLKDQDRIFQNVYNKYGHDLKSAQKMGDWYKTKEIILKGDKWIIDEMKKSGLR 83
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM + P YLVVNADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 84 GRGGAGFPSGLKWSFMNPPGWEKNPGPRYLVVNADEGEPGTCKDREIIRKDPHKLVEGCL 143
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG M A+AAYIYIRGE+ NE L++A EAY GL+GKNACGSGYDFDV+IH G GA
Sbjct: 144 LAGRAMNATAAYIYIRGEFYNEAVILQQAINEAYKEGLIGKNACGSGYDFDVYIHRGMGA 203
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGK GKPRLKPPFPA GL+G P+TVTNVETVAV+PTILRRG DWFA
Sbjct: 204 YICGEETALIESLEGKAGKPRLKPPFPAGVGLFGRPSTVTNVETVAVAPTILRRGGDWFA 263
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGRKNN+GTKLFC+SGHVN+PCTVEEEMSIPLKEL+++HCGGV+GGWDNLL VIPGG S
Sbjct: 264 SFGRKNNTGTKLFCISGHVNEPCTVEEEMSIPLKELLEKHCGGVKGGWDNLLGVIPGGCS 323
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP++PK +CDD+ MDYDAL+ V SGLGTAAVIVM+K TD++ AI R + FYKHESCGQCT
Sbjct: 324 VPVMPKSVCDDIAMDYDALRDVGSGLGTAAVIVMNKETDMIRAIQRFAAFYKHESCGQCT 383
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT WL +M+R G A +EIDM+ E+TK+IEGHTICALGDAAAWP+QGLI+ FR
Sbjct: 384 PCREGTTWLQKMMDRFVKGQATEKEIDMIFELTKEIEGHTICALGDAAAWPIQGLIKSFR 443
Query: 467 PELERRIKEHAE 478
P + RIK++ +
Sbjct: 444 PLMVDRIKQYEQ 455
>gi|114799778|ref|YP_760453.1| NADH dehydrogenase I subunit F [Hyphomonas neptunium ATCC 15444]
gi|114739952|gb|ABI78077.1| NADH-quinone oxidoreductase, F subunit [Hyphomonas neptunium ATCC
15444]
Length = 435
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/419 (70%), Positives = 358/419 (85%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG+H P L+ A KRG WH T++++ +G DWI N++K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGLHSPDLEAAKKRGAWHLTREMLEQGPDWICNQIKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKW+FMPK RP YLVVNADESEPGTCKDREI+RHDPH L+EGC++A MRA A
Sbjct: 62 TGLKWTFMPKEVRDRPHYLVVNADESEPGTCKDREILRHDPHLLIEGCMVASRAMRAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
Y+YIRGEY+NER LE+A +EAY A L+GK+ +G+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YVYIRGEYINERHALEKAVKEAYEAKLIGKDNV-NGWDFDLYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPANAGLYGCPTTV NVE++AV+PTILRRG WFA FGR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANAGLYGCPTTVNNVESIAVAPTILRRGAQWFAGFGRPNNAGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVN PC VEEEMSI ++LI+ HCGG+RGGW+NL AVIPGGSSVP++P D
Sbjct: 241 LFCISGHVNTPCNVEEEMSITFRDLIETHCGGIRGGWENLKAVIPGGSSVPMVPAEQIMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ ++SGLGTAAVIVMDK TD++ AIARL+YFYKHESCGQCTPCREGTGW+W
Sbjct: 301 AHMDFDTLRDLKSGLGTAAVIVMDKQTDLIRAIARLAYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ER+ G A+ +EID L +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RI ++
Sbjct: 361 VLERMARGEAEHDEIDTLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRHEIEDRITQY 419
>gi|51947511|gb|AAU14240.1| hydrogenosomal NADH dehydrogenase 51 kDa subunit [Nyctotherus
ovalis]
Length = 474
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/429 (69%), Positives = 359/429 (83%), Gaps = 1/429 (0%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G + D+DRIF+NLY DPF+ GA+KRGDW+RTKD++ D++++E+KKSGLRGRGGA
Sbjct: 31 YGNISDQDRIFSNLYKDQDPFINGALKRGDWYRTKDILSCPQDFVIDEIKKSGLRGRGGA 90
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLK+SFMPK SDGRPSYLVVNADESEP TCKDREIMRHDPHKL+EG LI G MRA
Sbjct: 91 GFPSGLKYSFMPKKSDGRPSYLVVNADESEPATCKDREIMRHDPHKLVEGALIVGYAMRA 150
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAY+YIRGE+ +E + LERA EAY G +GKNACGSGYDFD+++H GAGAY+CGEET+
Sbjct: 151 KAAYVYIRGEFWHEAQQLERAVAEAYEKGFIGKNACGSGYDFDIYVHRGAGAYVCGEETS 210
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
+L S+EG GKPR+KPP+PA GLYGCPTTVTNVETV+ PTI+RRG WFASFGRKNN
Sbjct: 211 MLSSIEGVVGKPRMKPPYPAGTGLYGCPTTVTNVETVSTVPTIMRRGGSWFASFGRKNNH 270
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKL+ +SGH+N PCTVE+EMSI ++ELI+RH GGVRGGWDNLL VIPGGSS P++ K +
Sbjct: 271 GTKLYSLSGHINNPCTVEDEMSISVRELIERHGGGVRGGWDNLLGVIPGGSSTPIISKEL 330
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C+ LMD+D+L S GTA VIV+DKSTDV+DAI RLS FY HESCGQCTPCREGTGW
Sbjct: 331 CETALMDFDSLIEAGSAFGTAGVIVLDKSTDVIDAILRLSKFYLHESCGQCTPCREGTGW 390
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI- 473
L ++ER+K+G A EID L E+TKQIEGHTICALG+AAAWPVQGLI+H+RP +E R+
Sbjct: 391 LVDMLERMKIGKADYGEIDQLYELTKQIEGHTICALGEAAAWPVQGLIKHYRPVMEDRMD 450
Query: 474 KEHAERELL 482
K H++ ++
Sbjct: 451 KYHSQHPVV 459
>gi|346994689|ref|ZP_08862761.1| NADH dehydrogenase I subunit F [Ruegeria sp. TW15]
Length = 432
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/418 (73%), Positives = 350/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YGMH+ LKGA RG W T L+ G DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGMHERTLKGAQARGHWDGTAGLIKNGRDWIIQTMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A EAY AGLLGKNA GSG+DFD+ +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDEAYDAGLLGKNAAGSGWDFDLFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI+ HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIETHCGGIRGGWDNLLAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKSTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGEAELEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 419
>gi|254452337|ref|ZP_05065774.1| NADH oxidoreductase (quinone), F subunit [Octadecabacter arcticus
238]
gi|198266743|gb|EDY91013.1| NADH oxidoreductase (quinone), F subunit [Octadecabacter arcticus
238]
Length = 428
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/416 (73%), Positives = 350/416 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYGMHD LKGA RG W T ++ KG WIV+++K SGLRGRGGAGFP
Sbjct: 3 LADKDRIFTNLYGMHDRTLKGAQARGHWDGTAGIIKKGRAWIVDQMKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 63 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 122
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A E Y AG++GKNAC SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 123 YIYIRGEYIREKEALQAAIDECYDAGMVGKNACKSGWDFDIYLHHGAGAYICGEETALLE 182
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++A PTILRRGPDWFA FGR NNSGTK
Sbjct: 183 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIATVPTILRRGPDWFAGFGRPNNSGTK 242
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L+ +SGHVN PC VEE MSIP +ELI++HCGGVRGGWDNL AVIPGGSSVP++ D
Sbjct: 243 LYAISGHVNNPCVVEESMSIPFEELIEKHCGGVRGGWDNLKAVIPGGSSVPMVRGENMRD 302
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D LK S LGTAAVIVMDK+TDV+ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 303 AIMDFDGLKEKGSSLGTAAVIVMDKNTDVIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 362
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+M+RL G+A + EIDML +VTKQ+EGHTICALGDAAAWP+QGLI++FR E+E RI
Sbjct: 363 VMDRLVKGDADVSEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIKNFRGEIEDRI 418
>gi|126736062|ref|ZP_01751806.1| NADH-quinone oxidoreductase, F subunit [Roseobacter sp. CCS2]
gi|126714619|gb|EBA11486.1| NADH-quinone oxidoreductase, F subunit [Roseobacter sp. CCS2]
Length = 428
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/418 (73%), Positives = 350/418 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDE+RIFTNLYGMHD LKGA RG W T ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LKDENRIFTNLYGMHDRTLKGAQARGHWDGTAGIIKKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A E YAAGL+G NA SG+DFD+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDECYAAGLVGPNAAKSGWDFDIYLTHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA GR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGGDWFAGMGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEEEMSI +ELI++HCGG+RGGWDNL AVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEEMSISFEELIEKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+DALK S LGTAAVIVMD STD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AVMDFDALKEKGSSLGTAAVIVMDNSTDMIKAIWRLSKFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+M RL GNA +EEIDML +VTKQ+EGHTICALGDAAAWP+QGLI++FR E+E RIK+
Sbjct: 362 VMARLVEGNASVEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIKNFRDEIEDRIKD 419
>gi|190891291|ref|YP_001977833.1| NADH dehydrogenase I subunit F [Rhizobium etli CIAT 652]
gi|190696570|gb|ACE90655.1| NADH-ubiquinone oxidoreductase protein, chain F [Rhizobium etli
CIAT 652]
Length = 434
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/424 (71%), Positives = 354/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC++A M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVVASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRGVGSSFGTAAAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 VMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|452750668|ref|ZP_21950415.1| NADH-ubiquinone oxidoreductase chain F [alpha proteobacterium
JLT2015]
gi|451961862|gb|EMD84271.1| NADH-ubiquinone oxidoreductase chain F [alpha proteobacterium
JLT2015]
Length = 433
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/429 (71%), Positives = 354/429 (82%), Gaps = 2/429 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG L A KRGDW TK G DW++ +VK SGLRGRGGAGFP
Sbjct: 5 LSDKDRIFTNLYGFQSAGLDAATKRGDWDNTKRWFENGPDWVIEQVKASGLRGRGGAGFP 64
Query: 118 SGLKWSFMPKVSDG-RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK RPSYLV+NADESEPG+CKDREI+RHDPHKLLEG LIAG MRA A
Sbjct: 65 TGVKWSFMPKEPPADRPSYLVINADESEPGSCKDREIIRHDPHKLLEGALIAGYAMRARA 124
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L+RA EAY GLLGKNA SGYDFDV++H GAGAYICGEETA+L
Sbjct: 125 AYIYIRGEYIREAEALQRAIDEAYDKGLLGKNAAKSGYDFDVYMHRGAGAYICGEETAML 184
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYG PTTV NVE++AV P ILRRG WF+ FGR+NN GT
Sbjct: 185 ESLEGKKGQPRLKPPFPAGAGLYGHPTTVNNVESIAVVPEILRRGSGWFSGFGRENNHGT 244
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHV +PC VEE MSIP ++LI+RHCGG+ GGWDNLLAVIPGGSSVPL+P
Sbjct: 245 KLFQISGHVERPCVVEESMSIPFRDLIERHCGGITGGWDNLLAVIPGGSSVPLVPAAEIM 304
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D L+ ++SGLGTAA+IVMDKSTD+V AI+R+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 305 DCPMDFDGLRDLKSGLGTAAIIVMDKSTDIVRAISRISYFYKHESCGQCTPCREGTGWMW 364
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL G A++EEIDML +VTK++EGHTICALGDAAAWP+QGLIRHFRPELERRI
Sbjct: 365 RVMERLVTGQAEVEEIDMLHDVTKEVEGHTICALGDAAAWPIQGLIRHFRPELERRIAAR 424
Query: 477 AERELLEAT 485
+ +LEA
Sbjct: 425 -KNAMLEAA 432
>gi|393718316|ref|ZP_10338243.1| NADH dehydrogenase I subunit F [Sphingomonas echinoides ATCC 14820]
Length = 434
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/419 (72%), Positives = 351/419 (83%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG L A+ RGDW TK L+ +G D +++ VK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNVYGFQPWTLDAAIMRGDWDDTKGLMARGQDALIDAVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDG-RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G KWSFMPK RP++LV+NADESEPG+CKDREI+RHDPHKL+EG LIAG MRA A
Sbjct: 62 TGTKWSFMPKEPKADRPNFLVINADESEPGSCKDREIIRHDPHKLIEGALIAGYAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L A EAYA GL+G+NA GSGYDFDV +H GAGAYICGEETA+L
Sbjct: 122 AYIYIRGEYIREAEVLFAAVAEAYAKGLIGRNASGSGYDFDVFVHRGAGAYICGEETAML 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRR P+WFASFG +NN GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRSPEWFASFGAENNRGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE MSI +ELI+ HCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVNKPCVVEEAMSITFRELIETHCGGIRGGWDNLLAVIPGGSSVPLVPAAEIM 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LK V SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 DCPMDFDGLKKVGSGLGTAAVIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+MER++ G+A + EID L +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+ERRI E
Sbjct: 362 RVMERMRTGDADISEIDTLYQVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMERRITE 420
>gi|344230234|gb|EGV62119.1| hypothetical protein CANTEDRAFT_125667 [Candida tenuis ATCC 10573]
Length = 492
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/433 (70%), Positives = 362/433 (83%), Gaps = 4/433 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P +TH GGLKD+DRIF N+YG + +K A K GDW++TK+++LKG WI++E+KKSGLR
Sbjct: 31 PNRTH-GGLKDQDRIFQNVYGKYGHDIKSAQKMGDWYKTKEIILKGDKWIIDEMKKSGLR 89
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM + P YLVVNADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 90 GRGGAGFPSGLKWSFMNPPGWEKNAGPRYLVVNADEGEPGTCKDREIIRKDPHKLVEGCL 149
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG GM A+AAYIYIRGE+ NE L+ A EAYAAG LGK+ACGSGY FDV+IH G GA
Sbjct: 150 LAGRGMNATAAYIYIRGEFYNEANVLQEAINEAYAAGFLGKDACGSGYPFDVYIHRGMGA 209
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEETAL+ES+EGK GKPRLKPPFPA GL+G PTTV NVETVAV+PTILRRG DWFA
Sbjct: 210 YVCGEETALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVANVETVAVAPTILRRGGDWFA 269
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N+GTKLFC+SGHVN+PCTVEEEMSIPLKEL+++HCGGV+GGWDNLL V+PGGSS
Sbjct: 270 GFGRERNAGTKLFCISGHVNEPCTVEEEMSIPLKELLEKHCGGVKGGWDNLLGVVPGGSS 329
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP++P +C++VLMDYDAL+ V SGLGTAAVIVM+K TD++ AI R S FYKHESCGQCT
Sbjct: 330 VPIMPIDVCENVLMDYDALRDVGSGLGTAAVIVMNKQTDIIRAIQRFSAFYKHESCGQCT 389
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT WL +M+R +G AK EIDM+ E+TK+IEGHTICALGDAAAWPVQGLI+ FR
Sbjct: 390 PCREGTTWLNSMMDRFVIGQAKEREIDMIYELTKEIEGHTICALGDAAAWPVQGLIKSFR 449
Query: 467 PELERRIKEHAER 479
P + RI + E+
Sbjct: 450 PVMVDRINQFNEK 462
>gi|344302765|gb|EGW33039.1| NADH-ubiquinone oxidoreductase 51 kDa subunit mitochondrial
precursor [Spathaspora passalidarum NRRL Y-27907]
Length = 486
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/446 (70%), Positives = 363/446 (81%), Gaps = 4/446 (0%)
Query: 33 QGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLV 92
Q T S P P + +GGLKD+DRIF N+YG + LK A K GDW++TK+++
Sbjct: 9 QRVLTRSLATMADPAANPHRI-YGGLKDQDRIFQNVYGTYGHDLKSAQKMGDWYKTKEII 67
Query: 93 LKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFM-PKVSDGR--PSYLVVNADESEPGTCK 149
LKG DWI+NE+KKSGLRGRGGAGFPSGLKWSFM P D P YLVVNADE EPGTCK
Sbjct: 68 LKGHDWIINEMKKSGLRGRGGAGFPSGLKWSFMNPPGWDKNVGPRYLVVNADEGEPGTCK 127
Query: 150 DREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNA 209
DREI+R DPHKL+EGCL+AG M A+AAYIYIRGE+ NE L+ A EAY AGL+GKNA
Sbjct: 128 DREIIRKDPHKLVEGCLLAGRAMNATAAYIYIRGEFYNEAVILQNAINEAYKAGLIGKNA 187
Query: 210 CGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVE 269
CGSGYDFDV+IH G GAYICGEETAL+ES+EGK GKPRLKPPFPA GL+G PTTV NVE
Sbjct: 188 CGSGYDFDVYIHRGMGAYICGEETALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVANVE 247
Query: 270 TVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGG 329
TV+V+PTILRRG DWFASFGR+ N GTKLFC+SGHVN+PCTVEEEMSIPLKEL+++HCGG
Sbjct: 248 TVSVAPTILRRGGDWFASFGRERNQGTKLFCISGHVNEPCTVEEEMSIPLKELLEKHCGG 307
Query: 330 VRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDA 389
+ GGWDNLL VIPGGSSVP++ K C++VLMDYDAL+ V SGLGTAAVIVM+K TD++ A
Sbjct: 308 IVGGWDNLLGVIPGGSSVPVMTKETCENVLMDYDALRDVGSGLGTAAVIVMNKQTDIIRA 367
Query: 390 IARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICA 449
I R S+FYKHESCGQCTPCREGT WL +M+R G A +EIDM+ E+TK+IEGHTICA
Sbjct: 368 IQRFSHFYKHESCGQCTPCREGTTWLQRMMDRFVKGQATEKEIDMIFELTKEIEGHTICA 427
Query: 450 LGDAAAWPVQGLIRHFRPELERRIKE 475
LGDAAAWPVQGLI+ FRP + RI +
Sbjct: 428 LGDAAAWPVQGLIKSFRPVMVDRINQ 453
>gi|424890844|ref|ZP_18314443.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393173062|gb|EJC73107.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 434
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/424 (71%), Positives = 354/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF++ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSAIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRGVGSSFGTAAAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 VMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|126135420|ref|XP_001384234.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Complex I-51KD) (CI-51KD) [Scheffersomyces
stipitis CBS 6054]
gi|126091432|gb|ABN66205.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Complex I-51KD) (CI-51KD) [Scheffersomyces
stipitis CBS 6054]
Length = 484
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/433 (70%), Positives = 359/433 (82%), Gaps = 4/433 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P + H GGLKD DRIF N+YG + LK +MK GDWH+TK+++LKG WI++E+KKSGLR
Sbjct: 24 PNRVH-GGLKDTDRIFQNIYGKYGHDLKSSMKMGDWHKTKEIILKGDKWIIDEMKKSGLR 82
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSGLKWSFM + P YLVVNADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 83 GRGGAGFPSGLKWSFMNPPGWEKNVGPRYLVVNADEGEPGTCKDREIIRKDPHKLVEGCL 142
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+AG GM A+AAYIYIRGE+ NE L+ A EAY AG LGKNACGSGYDFD++IH G GA
Sbjct: 143 LAGRGMNATAAYIYIRGEFYNEAVILQNAINEAYKAGFLGKNACGSGYDFDIYIHRGMGA 202
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
Y+CGEETAL+ES+EGK GKPRLKPPFPA GL+G PTTV NVETV+V+PTILRRG DWFA
Sbjct: 203 YVCGEETALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVANVETVSVAPTILRRGGDWFA 262
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ N G KLFC+SGHVN+PCTVEEEMSIPLKEL+++HCGGV+GGWDNLL VIPGGSS
Sbjct: 263 SFGRERNQGVKLFCISGHVNEPCTVEEEMSIPLKELLEKHCGGVKGGWDNLLGVIPGGSS 322
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP++ K CD++LMDYDAL+ V SGLGTAAVIVM+K TD++ I R S+FYKHESCGQCT
Sbjct: 323 VPIMTKETCDNILMDYDALRDVGSGLGTAAVIVMNKQTDIIRGIQRFSHFYKHESCGQCT 382
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT WL +M+R + G A +EIDM+ E+TK+IEGHTICALGDAAAWP+QGLI+ FR
Sbjct: 383 PCREGTTWLQRMMDRFQEGQATEKEIDMIFELTKEIEGHTICALGDAAAWPIQGLIKSFR 442
Query: 467 PELERRIKEHAER 479
P + RI E ++
Sbjct: 443 PVMVDRINEFKKK 455
>gi|222085581|ref|YP_002544111.1| NADH dehydrogenase I subunit F [Agrobacterium radiobacter K84]
gi|398376959|ref|ZP_10535139.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. AP16]
gi|221723029|gb|ACM26185.1| NADH-quinone oxidoreductase, F subunit [Agrobacterium radiobacter
K84]
gi|397727286|gb|EJK87712.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. AP16]
Length = 434
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/419 (71%), Positives = 355/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDQDRIFTNIYGHKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +DGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IAG M A+ A
Sbjct: 62 TGLKWSFMPKENDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIAGFAMGANTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN G+D+DV++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYDAGLLGKNN-KLGWDYDVYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSFGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN+PCTVEE M I +EL+D+H GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNRPCTVEETMGITFRELVDKHAGGIRGGWDNLLAVIPGGASCPIVPAADIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V+S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLREVKSSFGTAAAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 VLERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQY 419
>gi|83858409|ref|ZP_00951931.1| NADH dehydrogenase I, F subunit [Oceanicaulis sp. HTCC2633]
gi|83853232|gb|EAP91084.1| NADH dehydrogenase I, F subunit [Oceanicaulis sp. HTCC2633]
Length = 435
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/419 (73%), Positives = 356/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG HD L+GA +RG W+ TK+++ +G DWI++E+KKSGLRGRGGAGFP
Sbjct: 5 LQDKDRIFTNLYGRHDWRLEGAKQRGHWNATKEILEQGRDWIIDEMKKSGLRGRGGAGFP 64
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADESEPGTCKDREIMR+DP L+EGCLIA M+A A
Sbjct: 65 TGLKWSFMPKEVGARPHYLVVNADESEPGTCKDREIMRNDPQTLIEGCLIASFAMQAHAC 124
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY E +E A +EAY A L+GK+ G+DFD++IH+GAGAYICGEETALLE
Sbjct: 125 YIYIRGEYQFELGRMEAAIKEAYDAKLIGKDNI-HGWDFDLYIHHGAGAYICGEETALLE 183
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPANAGLYG PTTV NVE++AV+PTILRRG DWFA FGR+ N+GTK
Sbjct: 184 SLEGKKGQPRLKPPFPANAGLYGAPTTVNNVESIAVAPTILRRGADWFAGFGREGNAGTK 243
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+F +SGHVN PC VEE MSIPLK LI+ HCGGVRGGWDNL AVIPGGSSVPLLPK ICDD
Sbjct: 244 VFSISGHVNAPCNVEEVMSIPLKTLIETHCGGVRGGWDNLKAVIPGGSSVPLLPKEICDD 303
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DALK +SGLGTAAVIVMDKSTD+V AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 304 VLMDFDALKEHRSGLGTAAVIVMDKSTDLVKAIARISYFYKHESCGQCTPCREGTGWMWR 363
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+++R+ G A+ EID L +V Q+EGHTICALGDAAAWPVQGLIRHFR E+E RI +
Sbjct: 364 VLDRMSRGEAETSEIDDLLDVAGQVEGHTICALGDAAAWPVQGLIRHFRGEIEDRINNY 422
>gi|420239075|ref|ZP_14743426.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. CF080]
gi|398082873|gb|EJL73612.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. CF080]
Length = 434
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/419 (72%), Positives = 351/419 (83%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YG+ D LKGAM RG W TK+++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGLKDKSLKGAMSRGHWDGTKEIIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIAGFAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLG N G+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYDFGLLGGNN-KLGWDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSMGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEE M I +EL+D+H GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEVMGITFRELVDKHAGGIRGGWDNLLAVIPGGASCPIVPAKDIMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+AV S GTA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CQMDFDGLRAVGSSFGTAGAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIRHFRPE+E RI ++
Sbjct: 361 VLERMVKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRHFRPEIEARIDQY 419
>gi|116251471|ref|YP_767309.1| NADH dehydrogenase I subunit F [Rhizobium leguminosarum bv. viciae
3841]
gi|241204092|ref|YP_002975188.1| NADH dehydrogenase I subunit F [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|424874783|ref|ZP_18298445.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|424894569|ref|ZP_18318143.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|115256119|emb|CAK07200.1| putative NADH-quinone oxidoreductase subunit F [Rhizobium
leguminosarum bv. viciae 3841]
gi|240857982|gb|ACS55649.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|393170484|gb|EJC70531.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393178796|gb|EJC78835.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 434
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/424 (71%), Positives = 353/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF++ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSAIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRGVGSSFGTAAAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 VMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|452964819|gb|EME69852.1| NADH dehydrogenase I subunit F [Magnetospirillum sp. SO-1]
Length = 427
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/416 (72%), Positives = 356/416 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D DRIFTNLYG HD LKGAM RGDW+ TKD++ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LRDSDRIFTNLYGFHDWHLKGAMARGDWNGTKDILAKGRDWIIEEMKNSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK RP YLV+NADE EPGTCKDRE+MR DPHKL+EG LIA + A AA
Sbjct: 62 TGVKWSFMPKTEGPRPHYLVINADEGEPGTCKDREMMRFDPHKLIEGALIACFAIGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+V E ++L A EA AAGLLG NACGSG+D +V++H GAGAYICGEE+AL+E
Sbjct: 122 YIYIRGEFVREAEHLNIAIDEARAAGLLGPNACGSGWDCEVYVHRGAGAYICGEESALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG WFA G+ NN+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGAAWFAGLGKPNNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEEM IPLKELI++H GGVRGGWDNLLAVIPGGSSVP+L K C++
Sbjct: 242 VFCISGHVNTPCNVEEEMGIPLKELIEKHAGGVRGGWDNLLAVIPGGSSVPMLTKQQCEE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+DAL+A++SGLGTAAV+VMDKSTD+V AI RLS FY HESCGQCTPCREGTGW+
Sbjct: 302 VTMDFDALRAMRSGLGTAAVMVMDKSTDLVRAIHRLSRFYWHESCGQCTPCREGTGWMSR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+M R+ G+A+L EID+L+E+++QIEGHTICALGDAAAWP+QGLIR FRPE+ERRI
Sbjct: 362 MMGRMVTGDAELSEIDLLEEISRQIEGHTICALGDAAAWPIQGLIRAFRPEMERRI 417
>gi|83311881|ref|YP_422145.1| NADH dehydrogenase I subunit F [Magnetospirillum magneticum AMB-1]
gi|82946722|dbj|BAE51586.1| NADH:ubiquinone oxidoreductase [Magnetospirillum magneticum AMB-1]
Length = 427
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/416 (72%), Positives = 357/416 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D DRIFTNLYG+HD LKGAM RGDW+ TKD++ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LRDSDRIFTNLYGIHDWRLKGAMARGDWNGTKDILAKGRDWIIEEMKNSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK RP YLV+NADE EPGTCKDRE+MR DPHKL+EG LIA + A AA
Sbjct: 62 TGVKWSFMPKTEGPRPHYLVINADEGEPGTCKDREMMRFDPHKLIEGALIASFAIGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+V E ++L A EA AAGLLG NACGSG+D +V++H GAGAYICGEE+AL+E
Sbjct: 122 YIYIRGEFVREAEHLNIAIDEARAAGLLGPNACGSGWDCEVYVHRGAGAYICGEESALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG WF+ G+ NN+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGAAWFSGLGKPNNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEEM IPLKELI++H GGVRGGWDNLLA+IPGGSSVP+L K C++
Sbjct: 242 VFCISGHVNTPCNVEEEMGIPLKELIEKHAGGVRGGWDNLLAIIPGGSSVPMLTKQQCEE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+DAL+A++SGLGTAAV+VMDKSTD+V AI RLS FY HESCGQCTPCREGTGW+
Sbjct: 302 VTMDFDALRAMRSGLGTAAVMVMDKSTDLVRAIHRLSRFYWHESCGQCTPCREGTGWMSR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+M R+ G+A+L EID+L+E+++QIEGHTICALGDAAAWP+QGLIR FRPE+ERRI
Sbjct: 362 MMGRMVTGDAELSEIDLLEEISRQIEGHTICALGDAAAWPIQGLIRAFRPEMERRI 417
>gi|162148806|ref|YP_001603267.1| NADH dehydrogenase I subunit F [Gluconacetobacter diazotrophicus
PAl 5]
gi|209545446|ref|YP_002277675.1| NADH dehydrogenase subunit I F [Gluconacetobacter diazotrophicus
PAl 5]
gi|161787383|emb|CAP56978.1| NADH-quinone oxidoreductase chain F [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533123|gb|ACI53060.1| NADH-quinone oxidoreductase, F subunit [Gluconacetobacter
diazotrophicus PAl 5]
Length = 441
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/419 (71%), Positives = 354/419 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D L GA RGDW T +++ +G D I+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGQQDWRLAGARARGDWDGTAEIIARGRDAIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLV+N DESEPGTCKDREI+RHDPHKL+E LIA M A A
Sbjct: 62 TGVKWSFMPKNSDGRPHYLVINGDESEPGTCKDREILRHDPHKLIESALIASFAMGAHVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE ++L+ A EAYAAGL+G+NA GSG+DFD +IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFFNEARHLQIAIDEAYAAGLIGQNAAGSGWDFDFYIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA GLYGCPTTV NVE++AV+ TILRRG WF+S GR NN+GTK
Sbjct: 182 SLEGKKGQPRMKPPFPAAMGLYGCPTTVNNVESIAVAATILRRGATWFSSLGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +PLK++I++H GGVRGGWDNLLAVIPGGSSVPLLP +C+
Sbjct: 242 LMAISGHVNTPCVFEEELGVPLKDIIEKHGGGVRGGWDNLLAVIPGGSSVPLLPASVCET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A +SGLGTA +IVMDKSTDV+ AIAR S FYKHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAERSGLGTACMIVMDKSTDVIRAIARFSQFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M R+ G A++EEIDML++VT+Q+EGHTICALGDAAAWP+QGLIRHFRP +E RI+ +
Sbjct: 362 VMHRMVEGRAEIEEIDMLEQVTRQVEGHTICALGDAAAWPIQGLIRHFRPVMEERIRAY 420
>gi|402486151|ref|ZP_10832983.1| NADH dehydrogenase I subunit F [Rhizobium sp. CCGE 510]
gi|401814807|gb|EJT07137.1| NADH dehydrogenase I subunit F [Rhizobium sp. CCGE 510]
Length = 434
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/424 (71%), Positives = 353/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY RGEY+ ER+ L+ A E Y GLLGKN G+D D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYARGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF++ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSAIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRGVGSSFGTAAAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 VMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|209548868|ref|YP_002280785.1| NADH dehydrogenase I subunit F [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424881062|ref|ZP_18304694.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WU95]
gi|424914552|ref|ZP_18337916.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209534624|gb|ACI54559.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392517425|gb|EIW42157.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392850728|gb|EJB03249.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 434
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/424 (71%), Positives = 353/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC++A M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVVASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF++ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSAIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRGVGSSFGTAAAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 VMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|397607147|gb|EJK59572.1| hypothetical protein THAOC_20181 [Thalassiosira oceanica]
Length = 501
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/423 (71%), Positives = 356/423 (84%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGL+DEDRIFTNLYG D LK A+KRGD+H TKD++ G DWIV E+K SGLRGRGGA
Sbjct: 40 YGGLQDEDRIFTNLYGEQDWRLKDAVKRGDYHLTKDIMSMGPDWIVQEIKDSGLRGRGGA 99
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK SDGRPS+LVVNADESEPGTCKDREIMR DPHKL+EGCL+AG MRA
Sbjct: 100 GFPSGLKWSFMPKESDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRA 159
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGEY NE L+ A EAYAAG++GK+ACGSGYDFDV++H GAGAYICGEETA
Sbjct: 160 RAAYIYIRGEYFNEAVVLDEAIHEAYAAGMIGKDACGSGYDFDVYLHRGAGAYICGEETA 219
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEG+QGKPRLKPPFPA G++GCP+TVTNVETVAV+PTILRRG WFA FG NN
Sbjct: 220 LIESLEGRQGKPRLKPPFPAGVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGNPNNR 279
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHV P VEE MSIPL+ELI++HCGG+R GW++L A IPGGSSVP+L K
Sbjct: 280 GTKLFGISGHVKNPMVVEESMSIPLQELIEKHCGGMRNGWNSLQACIPGGSSVPVLNKAQ 339
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CD+ LM++D L++ SGLGTAAV + D + D+V AI RLS+FYKHESCGQCTPCREGT W
Sbjct: 340 CDEALMEFDDLRSKGSGLGTAAVTMFDDTVDMVGAIRRLSHFYKHESCGQCTPCREGTSW 399
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
L I+ R++ G+A EI ML+E+++QIEGHTICALGDAAAWPVQGL+RHF+ ++E RI
Sbjct: 400 LEDILIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQGLLRHFKKDIEDRID 459
Query: 475 EHA 477
+ A
Sbjct: 460 DPA 462
>gi|402850665|ref|ZP_10898858.1| NADH-ubiquinone oxidoreductase chain F [Rhodovulum sp. PH10]
gi|402499102|gb|EJW10821.1| NADH-ubiquinone oxidoreductase chain F [Rhodovulum sp. PH10]
Length = 440
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/422 (72%), Positives = 355/422 (84%), Gaps = 1/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIFTNLYG D L+GA KRG W TK L+ KG D IV ++K SGLRGRGGAGFP
Sbjct: 3 LNDRDRIFTNLYGQGDWGLEGARKRGAWDGTKALLEKGRDGIVADMKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREI+RHDPH L+EGCL+AG M A
Sbjct: 63 TGLKWSFMPKASDGRPSYLVVNADESEPGTCKDREILRHDPHLLVEGCLVAGFAMGAHTG 122
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A +AY A L+GKN G+DFD+++H+GAGAYICGEETALLE
Sbjct: 123 YIYVRGEFIRERERLQAAIDQAYEARLIGKNNI-HGFDFDLYVHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN+GTK
Sbjct: 182 SLEGKKGMPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFAGLGRPNNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEEEM IPL++LI+ H GGVRGGWDNLLAVIPGGSSV LP +C+D
Sbjct: 242 LFCISGHVNKPCNVEEEMGIPLRDLIETHAGGVRGGWDNLLAVIPGGSSVRCLPADLCND 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L ++SGLGTAAVIVMDKSTD+V AIAR+SYFY+HESCGQCTPCREGTGW+W
Sbjct: 302 LPMDFDSLMKLKSGLGTAAVIVMDKSTDIVRAIARISYFYRHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ R+ G A+ EIDML EV+KQ+EGHTICALGDAAAWP+QGLI HFR E+ERRI E+A
Sbjct: 362 VVSRMAEGRAEKREIDMLFEVSKQVEGHTICALGDAAAWPIQGLITHFRGEIERRIDEYA 421
Query: 478 ER 479
R
Sbjct: 422 AR 423
>gi|421587049|ref|ZP_16032504.1| NADH dehydrogenase I subunit F [Rhizobium sp. Pop5]
gi|403708570|gb|EJZ23225.1| NADH dehydrogenase I subunit F [Rhizobium sp. Pop5]
Length = 434
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/424 (71%), Positives = 353/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC++A M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVVASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDHGLLGKNN-KLGWDMDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF++ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSAIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRGVGSSFGTAAAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 VMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|448516866|ref|XP_003867656.1| Ndh51 subunit of nicotinamide adenine dinucleotide dehydrogenase
complex I [Candida orthopsilosis Co 90-125]
gi|380351995|emb|CCG22219.1| Ndh51 subunit of nicotinamide adenine dinucleotide dehydrogenase
complex I [Candida orthopsilosis]
Length = 491
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/452 (67%), Positives = 365/452 (80%), Gaps = 9/452 (1%)
Query: 31 STQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKD 90
S +G +T + P P H GGLKD+DRIF NLYG + LK A K GDW++TK+
Sbjct: 14 SIRGLATTADPAVNP------NRHHGGLKDQDRIFQNLYGNYGHDLKSAQKMGDWYKTKE 67
Query: 91 LVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGT 147
++LKG WI++E+KKSGLRGRGGAGFPSGLKWSFM + P YLVVNADE EPGT
Sbjct: 68 IILKGDKWIIDEMKKSGLRGRGGAGFPSGLKWSFMNPPGWEKNVGPRYLVVNADEGEPGT 127
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREI+R DPHKL+EGCL+AG M A+AAYIYIRGE+ NE L+ A EAY AGL+GK
Sbjct: 128 CKDREIIRKDPHKLVEGCLLAGRAMNATAAYIYIRGEFYNETVILQNAINEAYKAGLIGK 187
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFD+++H G GAY+CGEETAL+ES+EGK GKPRLKPPFPA GL+G PTTV N
Sbjct: 188 NACGSGYDFDIYVHRGMGAYVCGEETALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVAN 247
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETV+V+PTILRRG WF + GR+ NSGTKLFC+SGHVN+PCTVEEEMSIPLKEL+++HC
Sbjct: 248 VETVSVAPTILRRGGAWFDALGRERNSGTKLFCISGHVNEPCTVEEEMSIPLKELLEKHC 307
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GG++GGWDNLL V+PGGSSVP++PK CD VLMDYDAL+ V SGLGTAAVIVM+K TD++
Sbjct: 308 GGIKGGWDNLLGVVPGGSSVPIMPKETCDTVLMDYDALRDVGSGLGTAAVIVMNKQTDII 367
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
AI R S+FYKHESCGQCTPCREGT WL +M+R + G A EIDM+ E+TK+IEGHTI
Sbjct: 368 RAIQRFSHFYKHESCGQCTPCREGTTWLQRMMDRFQTGQATEREIDMIFELTKEIEGHTI 427
Query: 448 CALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
CALGDAAAWPVQGLI+ FRP + RI E+ ++
Sbjct: 428 CALGDAAAWPVQGLIKSFRPVMVDRINEYQKK 459
>gi|260945745|ref|XP_002617170.1| hypothetical protein CLUG_02615 [Clavispora lusitaniae ATCC 42720]
gi|238849024|gb|EEQ38488.1| hypothetical protein CLUG_02615 [Clavispora lusitaniae ATCC 42720]
Length = 486
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/455 (68%), Positives = 363/455 (79%), Gaps = 4/455 (0%)
Query: 27 LRSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWH 86
LR+ S P P + H GGLKD DRIF N+YG + LK A K GDW+
Sbjct: 2 LRNLRNSARSVRRLATNADPAVNPNRVH-GGLKDSDRIFQNVYGTYGHDLKSAQKMGDWY 60
Query: 87 RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADES 143
+TK+++LKG WI++E+KKSGLRGRGGAGFPSGLKWSFM + P YLVVNADE
Sbjct: 61 KTKEIILKGDKWIIDEMKKSGLRGRGGAGFPSGLKWSFMNPPGWEKNPGPRYLVVNADEG 120
Query: 144 EPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAG 203
EPGTCKDREI+R DPHKL+EGCL+AG GM A+AAYIYIRGE+ NE L+ A EAY +G
Sbjct: 121 EPGTCKDREIIRKDPHKLVEGCLLAGRGMNATAAYIYIRGEFYNETTILQNAINEAYKSG 180
Query: 204 LLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPT 263
LGKNACGSGYDFDV+IH G GAYICGEETAL+ES+EGK GKPRLKPPFPA GL+G PT
Sbjct: 181 FLGKNACGSGYDFDVYIHRGMGAYICGEETALIESIEGKAGKPRLKPPFPAGVGLFGRPT 240
Query: 264 TVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI 323
TV NVETV+V+PTILRRG DWFASFGR+ N+GTKL+C+SGHVN+PCTVEEEMSIPLKEL+
Sbjct: 241 TVANVETVSVAPTILRRGGDWFASFGRERNAGTKLYCISGHVNEPCTVEEEMSIPLKELL 300
Query: 324 DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKS 383
++HCGGV GGWDNLL VIPGG SVP++PK +CD+VLMDYDALK V SGLGTAAVIVM+K
Sbjct: 301 EKHCGGVIGGWDNLLGVIPGGCSVPVMPKDVCDNVLMDYDALKDVGSGLGTAAVIVMNKQ 360
Query: 384 TDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE 443
TD++ AI R S FYKHESCGQCTPCREGT WL +M+R G A +EID + E+TK+IE
Sbjct: 361 TDIIRAIQRFSAFYKHESCGQCTPCREGTTWLQKMMDRFVKGQATEKEIDQIFELTKEIE 420
Query: 444 GHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
GHTICALGDAAAWP+QGLI+ FRP + RI ++ +
Sbjct: 421 GHTICALGDAAAWPIQGLIKSFRPVMVDRINQYQK 455
>gi|68486372|ref|XP_712921.1| potential mitochondrial Complex I, NUBM_51kd subunit [Candida
albicans SC5314]
gi|68486437|ref|XP_712889.1| potential mitochondrial Complex I, NUBM_51kd subunit [Candida
albicans SC5314]
gi|46434308|gb|EAK93721.1| potential mitochondrial Complex I, NUBM_51kd subunit [Candida
albicans SC5314]
gi|46434343|gb|EAK93755.1| potential mitochondrial Complex I, NUBM_51kd subunit [Candida
albicans SC5314]
gi|238882235|gb|EEQ45873.1| NADH-quinone oxidoreductase chain F [Candida albicans WO-1]
Length = 490
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/427 (71%), Positives = 358/427 (83%), Gaps = 3/427 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
GGLKD+DRIF N+YG + LK A K GDW++TK+++LKG WI++E+KKSGLRGRGGAG
Sbjct: 32 GGLKDQDRIFQNVYGTYGHDLKSAQKMGDWYKTKEIILKGDKWIIDEMKKSGLRGRGGAG 91
Query: 116 FPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
FPSGLKWSFM + P YLVVNADE EPGTCKDREI+R DPHKL+EGCL+AG M
Sbjct: 92 FPSGLKWSFMNPPGWEKNVGPRYLVVNADEGEPGTCKDREIIRKDPHKLVEGCLLAGRAM 151
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
A+AAYIYIRGE+ NE L+ A EAY AGL+GKNACGSGYDFD++IH G GAYICGEE
Sbjct: 152 NATAAYIYIRGEFYNETVVLQNAINEAYKAGLIGKNACGSGYDFDIYIHRGMGAYICGEE 211
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
TAL+ES+EGK GKPRLKPPFPA GL+G PTTV NVE+V+V+PTILRRG DWFASFGR+
Sbjct: 212 TALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVANVESVSVAPTILRRGGDWFASFGRER 271
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
N+GTKLFC+SGHVN+PCTVEEEMSIPLKEL+++HCGG+ GGWDNLL VIPGGSSVP++PK
Sbjct: 272 NAGTKLFCISGHVNEPCTVEEEMSIPLKELLEKHCGGIVGGWDNLLGVIPGGSSVPIMPK 331
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
CD+VLMDYDAL+ V SGLGTAAVIVM+K TD++ AI R S+FYKHESCGQCTPCREGT
Sbjct: 332 ETCDNVLMDYDALRDVGSGLGTAAVIVMNKQTDIIRAIQRFSHFYKHESCGQCTPCREGT 391
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
WL +M+R G A +EID + E+TK+IEGHTICALGDAAAWPVQGLI+ FRP + R
Sbjct: 392 TWLQRMMDRFYTGQATEKEIDQIFELTKEIEGHTICALGDAAAWPVQGLIKSFRPVMVDR 451
Query: 473 IKEHAER 479
IKE ++
Sbjct: 452 IKEFQQK 458
>gi|296536151|ref|ZP_06898279.1| NADH-quinone oxidoreductase subunit F [Roseomonas cervicalis ATCC
49957]
gi|296263522|gb|EFH10019.1| NADH-quinone oxidoreductase subunit F [Roseomonas cervicalis ATCC
49957]
Length = 435
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/423 (71%), Positives = 355/423 (83%), Gaps = 1/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+H LK A +RG W T ++ KG DWI+ E+K+SGLRGRGGAGFP
Sbjct: 3 LSDKDRIFTNLYGLHPWNLKEARRRGSWDGTAAIIAKGRDWIIEEMKQSGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK + DGRPSYLVVN DESEPGTCKDR+I+R+DPH L+EGCL AGVGM A A
Sbjct: 63 TGMKWSFMPKSNPDGRPSYLVVNGDESEPGTCKDRDIIRNDPHLLIEGCLYAGVGMGAHA 122
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGEY NE + L+ A EAY AGLLG NA GSG+DFD+++H GAGAYICGEETAL+
Sbjct: 123 GYIYVRGEYYNEIQILQAAIDEAYEAGLLGPNAAGSGWDFDLYVHRGAGAYICGEETALI 182
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G PRLKPPFPA GLYGCPTTV NVET+AV P IL+RG WF+SFGR N GT
Sbjct: 183 ESLEGKKGMPRLKPPFPAAVGLYGCPTTVNNVETIAVVPAILKRGASWFSSFGRPKNVGT 242
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+ GHVNKPC VE EMSIP++ELI+R+ GGVRGGWDNLLAVIPGGSS PLLPKHICD
Sbjct: 243 KIFCIQGHVNKPCNVEAEMSIPMRELIERYAGGVRGGWDNLLAVIPGGSSTPLLPKHICD 302
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
DVLMD+DAL+ +SGLGTA VIVMDKSTD++ AIARL+ FYKHESCGQCTPCREG GW
Sbjct: 303 DVLMDFDALREHKSGLGTAGVIVMDKSTDIIKAIARLAQFYKHESCGQCTPCREGMGWQK 362
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+R+ G A++EEID+L+ VT+QIEGHTICAL D WPVQGLIRHFRP +E RI+++
Sbjct: 363 RLMDRMVEGRAEIEEIDLLEGVTRQIEGHTICALADGGVWPVQGLIRHFRPLMEERIRQY 422
Query: 477 AER 479
++
Sbjct: 423 KQK 425
>gi|126729558|ref|ZP_01745371.1| NADH-quinone oxidoreductase, F subunit [Sagittula stellata E-37]
gi|126709677|gb|EBA08730.1| NADH-quinone oxidoreductase, F subunit [Sagittula stellata E-37]
Length = 432
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/418 (73%), Positives = 350/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYGMHD L GA KRG W T L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LHDQDRIFTNLYGMHDRTLDGAKKRGHWDGTAGLIEKGRDWIIQEMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCL A M+A A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLFASFAMQAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+RA EAY AGL+G NA GSG+DF++ +H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQRAIDEAYDAGLVGPNAAGSGWDFEIFLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG WF+SFGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGASWFSSFGRENNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVNKPC VEE MSI +ELI++HCGG+RGGWDNL AVIPGGSSVP + D
Sbjct: 242 LFAVSGHVNKPCVVEEAMSISFEELIEKHCGGIRGGWDNLKAVIPGGSSVPCVRGEKMKD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDK TD++ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKDTDIIKAIWRLAKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGEADEEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIK 419
>gi|400753913|ref|YP_006562281.1| NADH-quinone oxidoreductase subunit F [Phaeobacter gallaeciensis
2.10]
gi|398653066|gb|AFO87036.1| NADH-quinone oxidoreductase subunit F [Phaeobacter gallaeciensis
2.10]
Length = 432
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/418 (72%), Positives = 349/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMH+ L GA +RG W T ++ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHERTLAGAKQRGHWDGTAGIIEKGRDWIIQNMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDREIMRHDPH L+EG LIA M A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVINADESEPGTCKDREIMRHDPHTLIEGALIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLG+NA GSG+DFDV +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDECYDQGLLGRNAAGSGWDFDVFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGPDWFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPDWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGEKMKD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAA+IVMDK TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAIIVMDKQTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVKGEAELEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 419
>gi|254465162|ref|ZP_05078573.1| NADH oxidoreductase (quinone), F subunit [Rhodobacterales bacterium
Y4I]
gi|206686070|gb|EDZ46552.1| NADH oxidoreductase (quinone), F subunit [Rhodobacterales bacterium
Y4I]
Length = 432
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/418 (72%), Positives = 348/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMH+ L GA RG W T ++ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHERTLAGAKARGHWDGTAGIIEKGRDWIIQTMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A EAY GLLG NA GSG+DFD+ +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDEAYDQGLLGNNAAGSGWDFDIFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
LMD+D L+ + SGLGTAAVIVMDK TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 ALMDFDYLRGELGSGLGTAAVIVMDKQTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLI++FR E+E RIK
Sbjct: 362 RVMDRLVKGEAELEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIKNFREEIEDRIK 419
>gi|399992240|ref|YP_006572480.1| NADH-quinone oxidoreductase subunit F [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
gi|398656795|gb|AFO90761.1| NADH-quinone oxidoreductase subunit F [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
Length = 432
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/418 (72%), Positives = 350/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMH+ L GA +RG W T ++ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHERTLAGAKQRGHWDGTAGIIEKGRDWIIQNMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDREIMRHDPH L+EG LIA M A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVINADESEPGTCKDREIMRHDPHTLIEGALIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLG+NA GSG+DFDV +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDECYDQGLLGRNAAGSGWDFDVLLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGPDWFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPDWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGEKMKD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDK+TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKNTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVKGEAELEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 419
>gi|421850284|ref|ZP_16283247.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus NBRC
101655]
gi|371458876|dbj|GAB28450.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus NBRC
101655]
Length = 442
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/419 (71%), Positives = 353/419 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D L A KRGDW T D++ KG D IV E+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGQDDWRLPAARKRGDWVNTADIIAKGRDAIVAEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLV+N DESEPGTCKDRE+MRH+PHKL+E +IA M A A+
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVINGDESEPGTCKDREVMRHEPHKLIESAMIASFAMGAHAS 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ E + L+ A EAY AGLLGKNA GSG+DFD IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFCREAERLQAAIDEAYEAGLLGKNAAGSGWDFDFRIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA AGLYGCPTTV NVE++AV+ TI+RRG WF+ GR NN+GTK
Sbjct: 182 SLEGKKGQPRMKPPFPAGAGLYGCPTTVNNVESIAVTSTIMRRGAAWFSGLGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +PLKE+I++H GGVRGGWDNLLAVIPGG SVP+LPK IC+
Sbjct: 242 LMAISGHVNTPCVFEEELGVPLKEIIEKHGGGVRGGWDNLLAVIPGGCSVPVLPKSICET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A +SGLGTA +IVMDKSTD+++AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAERSGLGTACMIVMDKSTDIIEAIARFSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M R+ G A++EEID+L++VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+E RI+++
Sbjct: 362 MMNRMVQGTAEIEEIDLLEQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEMEARIRQY 420
>gi|404253329|ref|ZP_10957297.1| NADH dehydrogenase I subunit F [Sphingomonas sp. PAMC 26621]
Length = 434
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/419 (72%), Positives = 351/419 (83%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG L+ A+KRGDW TK L+ +G D +++ VK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNVYGFQPWNLEAAIKRGDWDDTKGLMARGQDALIDAVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSD-GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G KWSFMPK RP++LV+NADESEPG+CKDREI+RHDPHKL+EG LIAG MRA A
Sbjct: 62 TGTKWSFMPKEPKPDRPNFLVINADESEPGSCKDREIIRHDPHKLIEGALIAGYAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L A EAY GL+GKNA GSGYDFDV +H GAGAYICGEETA+L
Sbjct: 122 AYIYIRGEYIREAEVLFAAVAEAYDKGLIGKNASGSGYDFDVFVHRGAGAYICGEETAML 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRR P+WFASFG + N GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRSPEWFASFGAEGNRGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE MSI +ELI+ HCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVNKPCVVEEAMSITFRELIETHCGGIRGGWDNLLAVIPGGSSVPLVPAAEIM 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LK V SGLGTAA+IVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 DCPMDFDGLKKVGSGLGTAAIIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+MER++ G+A + EID L +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+ERRI E
Sbjct: 362 RVMERMRTGDADISEIDTLYQVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMERRITE 420
>gi|405381790|ref|ZP_11035613.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. CF142]
gi|397321677|gb|EJJ26092.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. CF142]
Length = 434
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/424 (71%), Positives = 354/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMR+DPH L+EGC+IA M A+AA
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDIMRNDPHTLIEGCVIASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN G+D D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDAGLLGKNN-KLGWDMDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEE M I +EL+D+H GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEESMGITFRELVDKHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+AV S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRAVGSSFGTAASIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E RI ++
Sbjct: 361 VMERMARGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEARIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ANAL 424
>gi|86357243|ref|YP_469135.1| NADH dehydrogenase I subunit F [Rhizobium etli CFN 42]
gi|86281345|gb|ABC90408.1| NADH-ubiquinone oxidoreductase chain F protein [Rhizobium etli CFN
42]
Length = 434
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/424 (70%), Positives = 352/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC++A M A+ A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVVASFAMGANTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN+PCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNRPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRGVGSSFGTAAAIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E+RI ++
Sbjct: 361 LMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|409436903|ref|ZP_11264062.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Rhizobium mesoamericanum STM3625]
gi|408751377|emb|CCM75216.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Rhizobium mesoamericanum STM3625]
Length = 434
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/424 (71%), Positives = 351/424 (82%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LHDKDRIFTNIYGLKDKSLKGAMARGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A+ A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGANTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF++ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSAIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+AV S GTAA IVMDKSTDV+ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRAVGSSFGTAASIVMDKSTDVIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FRPE+E RI ++
Sbjct: 361 VMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRPEIEARIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|170742516|ref|YP_001771171.1| NADH dehydrogenase I subunit F [Methylobacterium sp. 4-46]
gi|168196790|gb|ACA18737.1| NADH-quinone oxidoreductase, F subunit [Methylobacterium sp. 4-46]
Length = 433
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/420 (72%), Positives = 350/420 (83%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG H P L A +RG W TK L+ +G DWI++E+KKSGLRGRGGAGF
Sbjct: 2 LSDQDRIFTNLYGFHSPGLDAARRRGAWDGTKFLLEQGRDWIIDEMKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A AA
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLLASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E+ L+RA EAY A L+G + GY FD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYVAEKHALQRAVDEAYEARLIGPDNV-HGYPFDLYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+ ILRRG WF+ GR NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAGAILRRGAAWFSGIGRPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVN+PC VEE + IP +ELIDRHCGG+RGGWDNLLAVIPGGSSVPL+P D
Sbjct: 241 LFCVSGHVNRPCNVEEALGIPFRELIDRHCGGIRGGWDNLLAVIPGGSSVPLVPAAQIAD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ + SGLGTAAVIV+DK+TD+V AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 APMDFDTLRGLGSGLGTAAVIVLDKTTDIVAAIARISYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M R+ G A+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIRHFRPE+E+RI ++
Sbjct: 361 VMLRMAEGRAQKREIDMLLDVTKQIEGHTICALGDAAAWPIQGLIRHFRPEIEKRIDRYS 420
>gi|395493004|ref|ZP_10424583.1| NADH dehydrogenase I subunit F [Sphingomonas sp. PAMC 26617]
Length = 434
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/419 (72%), Positives = 351/419 (83%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG L+ A+KRGDW TK L+ +G D +++ VK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNVYGFQPWNLEAAIKRGDWDDTKGLMARGQDALIDAVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSD-GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G KWSFMPK RP++LV+NADESEPG+CKDREI+RHDPHKL+EG LIAG MRA A
Sbjct: 62 TGTKWSFMPKEPKPDRPNFLVINADESEPGSCKDREIIRHDPHKLIEGALIAGYAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L A EAY GL+GKNA GSGYDFDV +H GAGAYICGEETA+L
Sbjct: 122 AYIYIRGEYIREAEVLFAAVAEAYDKGLIGKNASGSGYDFDVFVHRGAGAYICGEETAML 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRR P+WFASFG + N GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRSPEWFASFGAEGNRGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE MSI +ELI+ HCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVNKPCVVEEAMSITFRELIETHCGGIRGGWDNLLAVIPGGSSVPLVPAAEIM 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LK V SGLGTAA+IVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 DCPMDFDGLKKVGSGLGTAAIIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+MER++ G+A + EID L +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+ERRI E
Sbjct: 362 RVMERMRTGDADISEIDTLYQVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMERRITE 420
>gi|114569910|ref|YP_756590.1| NADH dehydrogenase I subunit F [Maricaulis maris MCS10]
gi|114340372|gb|ABI65652.1| NADH dehydrogenase subunit F [Maricaulis maris MCS10]
Length = 437
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/419 (72%), Positives = 352/419 (84%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNL+G H P L+GA +RG W+ T +++ +G DWI+ +K SGLRGRGGAGFP
Sbjct: 6 LQDKDRIFTNLFGHHSPDLEGAKQRGCWNGTTEILQQGRDWIIENMKASGLRGRGGAGFP 65
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M+A A
Sbjct: 66 TGLKWSFMPKEVGARPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASFSMQAHAC 125
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEYV ER +E+A +EAY A L+G + G+ F V+IH+GAGAYICGEETALLE
Sbjct: 126 YIYLRGEYVTERLAMEKAVKEAYEAKLIGDDNI-HGWPFHVYIHHGAGAYICGEETALLE 184
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPANAGLYGCPTTV NVE++AV+ TILRRG +WFASFGR+ N GTK
Sbjct: 185 SLEGKKGQPRLKPPFPANAGLYGCPTTVNNVESIAVAGTILRRGAEWFASFGRERNVGTK 244
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+F +SGHVN PC VEE MSIP+K LI+ H GGVRGGWDNL AVIPGGSSV LLPK ICDD
Sbjct: 245 IFSISGHVNNPCNVEEAMSIPMKTLIETHAGGVRGGWDNLKAVIPGGSSVSLLPKDICDD 304
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+DAL A +SGLGTAAVIVMDKSTDVV AIAR+SYFY+HESCGQCTPCREGTGW+W
Sbjct: 305 VLMDFDALSAHKSGLGTAAVIVMDKSTDVVKAIARISYFYRHESCGQCTPCREGTGWMWR 364
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G + +EEIDML +V Q+EGHTICALGDAAAWPVQGLIRHFR E+E RI +
Sbjct: 365 VLTRMSRGESTIEEIDMLLDVAGQVEGHTICALGDAAAWPVQGLIRHFRSEIEDRINNY 423
>gi|354543632|emb|CCE40353.1| hypothetical protein CPAR2_103910 [Candida parapsilosis]
Length = 491
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/452 (67%), Positives = 364/452 (80%), Gaps = 9/452 (1%)
Query: 31 STQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKD 90
S +G +T + P P H GGLKD+DRIF NLYG + LK A K GDW++TK+
Sbjct: 14 SIRGLATTADPAANP------NRHHGGLKDQDRIFQNLYGNYGHDLKSAQKMGDWYKTKE 67
Query: 91 LVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGT 147
++LKG WI++E+KKSGLRGRGGAGFPSGLKWSFM + P YLVVNADE EPGT
Sbjct: 68 IILKGDKWIIDEMKKSGLRGRGGAGFPSGLKWSFMNPPGWEKNVGPRYLVVNADEGEPGT 127
Query: 148 CKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGK 207
CKDREI+R DPHKL+EGCL+AG M A+AAYIYIRGE+ NE L+ A EAY AGL+GK
Sbjct: 128 CKDREIIRKDPHKLVEGCLLAGRAMNATAAYIYIRGEFYNETVILQNAINEAYKAGLIGK 187
Query: 208 NACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTN 267
NACGSGYDFD+++H G GAY+CGEETAL+ES+EGK GKPRLKPPFPA GL+G PTTV N
Sbjct: 188 NACGSGYDFDIYVHRGMGAYVCGEETALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVAN 247
Query: 268 VETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHC 327
VETV+V+PTILRRG WF + GR+ NSGTKLFC+SGHVN PCTVEEEMSIPLKEL+++HC
Sbjct: 248 VETVSVAPTILRRGGAWFDALGRERNSGTKLFCISGHVNDPCTVEEEMSIPLKELLEKHC 307
Query: 328 GGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVV 387
GG++GGWDNLL V+PGGSSVP++PK CD VLMDYDAL+ V SGLGTAAVIVM+K TD++
Sbjct: 308 GGIKGGWDNLLGVVPGGSSVPIMPKETCDTVLMDYDALRDVGSGLGTAAVIVMNKQTDII 367
Query: 388 DAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
AI R ++FYKHESCGQCTPCREGT WL +M+R + G A EIDM+ E+TK+IEGHTI
Sbjct: 368 RAIQRFAHFYKHESCGQCTPCREGTTWLQRMMDRFQTGQATEREIDMIFELTKEIEGHTI 427
Query: 448 CALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
CALGDAAAWPVQGLI+ FRP + RI E+ ++
Sbjct: 428 CALGDAAAWPVQGLIKSFRPVMVDRINEYQKK 459
>gi|399036620|ref|ZP_10733626.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. CF122]
gi|398065789|gb|EJL57405.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. CF122]
Length = 434
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/424 (71%), Positives = 352/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGK+ GY D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKSN-KLGYPIDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWDNLLAVIPGG+S P++P D
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+AV S GTAA IVMDKSTDVV AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 CPMDFDGLRAVGSSFGTAAAIVMDKSTDVVKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWPVQGLIR+FR E+E RI ++
Sbjct: 361 VMERMAKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPVQGLIRNFRHEIEARIDQYT 420
Query: 478 EREL 481
L
Sbjct: 421 ASAL 424
>gi|347760093|ref|YP_004867654.1| NADH-quinone oxidoreductase subunit F [Gluconacetobacter xylinus
NBRC 3288]
gi|347579063|dbj|BAK83284.1| NADH-quinone oxidoreductase chain F [Gluconacetobacter xylinus NBRC
3288]
Length = 441
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/419 (70%), Positives = 353/419 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG +D L GA RGDW T D++ +G D I+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGQNDWMLAGARARGDWDGTADILARGRDAIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLV+N DESEPGTCKDREI+RHDPHKL+E LIA M A AA
Sbjct: 62 TGVKWSFMPKKNDGRPHYLVINGDESEPGTCKDREILRHDPHKLVESALIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE +L+ A EAYAAGL+GKNACGSG+DFD +IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFYNEAMHLQHAIDEAYAAGLIGKNACGSGWDFDFYIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA GLYGCPTTV NVE++AVS TILRRG WF+ GR NN+GTK
Sbjct: 182 SLEGKKGQPRMKPPFPAAMGLYGCPTTVNNVESIAVSATILRRGAAWFSGLGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +P++ELI++H GGVRGGWDNLLAVIPGG SVP+LP+ +C+
Sbjct: 242 LMAISGHVNTPCVFEEELGVPMRELIEKHGGGVRGGWDNLLAVIPGGCSVPMLPRDVCES 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A SGLGT +IVMDKSTD++ AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAEGSGLGTGCMIVMDKSTDIIAAIARFSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IM+R+ G A++EEIDML++VT+Q+EGHTICALGDAAAWP+QGLIR FRP +E RI+ +
Sbjct: 362 IMDRMVQGRAEIEEIDMLEQVTRQVEGHTICALGDAAAWPIQGLIRRFRPVMEERIRAY 420
>gi|339021755|ref|ZP_08645747.1| NADH-quinone oxidoreductase chain F [Acetobacter tropicalis NBRC
101654]
gi|338751251|dbj|GAA09051.1| NADH-quinone oxidoreductase chain F [Acetobacter tropicalis NBRC
101654]
Length = 442
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/419 (70%), Positives = 357/419 (85%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D L+GA KRGDW T ++ KG D +V E+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGQDDWKLEGARKRGDWDDTAAILAKGRDGVVAEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLV+N DESEPGTCKDRE+MRH+PHKL+E LIA M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVINGDESEPGTCKDREVMRHEPHKLIESALIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ E ++L+ A EAYAAGLLGKNA G+G+DFD +IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFFREAEHLQYAVDEAYAAGLLGKNAAGTGWDFDFYIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA GLYGCPTTV NVE+++V+ TI+RRG WFA GR NN+G+K
Sbjct: 182 SLEGKKGQPRMKPPFPAGVGLYGCPTTVNNVESISVASTIMRRGASWFAGLGRPNNAGSK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +PLK++I++H GGVRGGWDNLLAVIPGG SVP+LPK IC+
Sbjct: 242 LMAISGHVNTPCVFEEELGVPLKDIIEKHGGGVRGGWDNLLAVIPGGCSVPVLPKSICET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A +SGLGTA +IVMDKSTD+++AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAERSGLGTACMIVMDKSTDIIEAIARFSRFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+R+ G A+LEEID+L++VT+Q+EGHTICALGDAAAWP+QGLIRHFRPE+E RI+++
Sbjct: 362 MMDRMVQGRAELEEIDLLEQVTRQVEGHTICALGDAAAWPIQGLIRHFRPEMEARIRQY 420
>gi|384263107|ref|YP_005418295.1| NADH-quinone oxidoreductase subunit F [Rhodospirillum photometricum
DSM 122]
gi|378404209|emb|CCG09325.1| NADH-quinone oxidoreductase, F subunit [Rhodospirillum
photometricum DSM 122]
Length = 428
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/417 (72%), Positives = 350/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIFTNLYG HD L GA RGDW T ++ +G D I+ E+K SGLRGRGGAGF
Sbjct: 2 LHDRDRIFTNLYGFHDWRLAGARARGDWDNTAAILARGRDGIIAEMKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMP+ RP YLVVNADE EPGTCKDR+IMR DPHKL+EGCLIAG + A A
Sbjct: 62 TGLKWSFMPREIGERPHYLVVNADEGEPGTCKDRDIMRFDPHKLIEGCLIAGFAIGAHVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+V E +LE A EA AG LG +ACGSG+ +V++H GAGAY+CGEETAL++
Sbjct: 122 YIYIRGEFVQEAHHLETAIAEAREAGFLGPDACGSGWAMEVYVHRGAGAYVCGEETALIQ 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG WFA GR+NN+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGGAWFAGLGRENNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEEM IPL+ELI++H GGVRGGWDNLLAVIPGGSSVP+LPK ICD
Sbjct: 242 VFCISGHVNTPCNVEEEMGIPLRELIEKHAGGVRGGWDNLLAVIPGGSSVPVLPKEICDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+DAL+ V+SGLGTAAVIVMDKSTD+V AIARLS FY HESCGQCTPCREGTGWL
Sbjct: 302 VRMDFDALREVRSGLGTAAVIVMDKSTDIVKAIARLSRFYMHESCGQCTPCREGTGWLSR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEID+L++VT+QIEGHTICALGDAAAWP+QGLIRHFRPE+ +RIK
Sbjct: 362 VMQRLVTGEARLEEIDILEQVTRQIEGHTICALGDAAAWPIQGLIRHFRPEIVKRIK 418
>gi|449662360|ref|XP_002162472.2| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Hydra magnipapillata]
Length = 446
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/414 (75%), Positives = 349/414 (84%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
P +KT FG L D+DRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+NE+K SGL
Sbjct: 31 PKQKTKFGPLSDDDRIFTNLYGRHDWKLKGAQARGDWYKTKEIILKGHDWILNEIKTSGL 90
Query: 109 RGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
RGRGGAGFPSGLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIA
Sbjct: 91 RGRGGAGFPSGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIA 150
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
G M A AAYIYIRGE+ NE N++ A QEAY AGL+GKNACG+GYDFDV +H GAGAYI
Sbjct: 151 GRAMGARAAYIYIRGEFYNEASNMQVAIQEAYKAGLIGKNACGTGYDFDVFMHRGAGAYI 210
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
CGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+P I RRG WFAS
Sbjct: 211 CGEETALIESLEGKQGKPRLKPPFPADIGVFGCPTTVANVETVAVAPEICRRGGSWFASM 270
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
GR NSG KLF +SGHVN PCTVEEEMSIPLKELI+RH GGV GGWDNLL +IPGGSS P
Sbjct: 271 GRPRNSGQKLFNISGHVNHPCTVEEEMSIPLKELIERHAGGVLGGWDNLLCIIPGGSSTP 330
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
L+PK +C+DVLMD+D L Q+GLGTAA+IVM+K +DVV IARL FYKHESCGQCTPC
Sbjct: 331 LIPKKVCEDVLMDFDDLIRAQTGLGTAAIIVMNKQSDVVRCIARLIEFYKHESCGQCTPC 390
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
REG GW+ IM+R G AK EIDML E++KQIEGHTICALGD AAWPVQ ++
Sbjct: 391 REGVGWMNNIMKRFVDGKAKSAEIDMLWEISKQIEGHTICALGDGAAWPVQVIL 444
>gi|254475856|ref|ZP_05089242.1| NADH oxidoreductase (quinone), F subunit [Ruegeria sp. R11]
gi|214030099|gb|EEB70934.1| NADH oxidoreductase (quinone), F subunit [Ruegeria sp. R11]
Length = 432
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/418 (72%), Positives = 348/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMH+ L GA +RG W T L+ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHERTLAGAKQRGHWDGTAGLIEKGRDWIIQTMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDREIMRHDPH L+EG LIA M A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVINADESEPGTCKDREIMRHDPHTLIEGALIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A EAY GLLG+NA GSG+DFDV +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDEAYDNGLLGRNAAGSGWDFDVFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAGFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDK TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKQTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVKGEAELEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 419
>gi|54650938|gb|AAV37047.1| AT08270p [Drosophila melanogaster]
Length = 702
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/432 (70%), Positives = 350/432 (81%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L D DRIFTNLYG HD LK AMKRGDW++TK+++ KG WIVNE+K SGLRGRGGA
Sbjct: 255 FGPLADADRIFTNLYGRHDWRLKAAMKRGDWYKTKEIIAKGDKWIVNEIKTSGLRGRGGA 314
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFM K DGRP +LVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 315 GFPSGLKWSFMHKPPDGRPKFLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 374
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+ +IYIRGE+ NE NL+ A EAY AG LGKNACGSG+DFD+++ GAGAYICGEET+
Sbjct: 375 NTGFIYIRGEFYNEACNLQYAIIEAYKAGYLGKNACGSGFDFDLYVQRGAGAYICGEETS 434
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGK GKPR KPPFPA+ G++GCP+TVTNVETVAVSPTI RRG +WFASFGR NS
Sbjct: 435 LIESLEGKAGKPRNKPPFPADIGVFGCPSTVTNVETVAVSPTICRRGGNWFASFGRTRNS 494
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHV PCTVEEEMS+P +ELI+RH GGV GGWDNLLA+IPGGSS P + K
Sbjct: 495 GTKLFNISGHVCNPCTVEEEMSMPTRELIERHAGGVIGGWDNLLAIIPGGSSTPCITKEH 554
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
+ DYD L AV+S +GT A+IVM+K TD++ AIARLS FYKHESCGQCTPCREG W
Sbjct: 555 ASSAIHDYDGLMAVRSSMGTGALIVMNKDTDIIKAIARLSAFYKHESCGQCTPCREGLHW 614
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ MIM R G A++ EIDML E+TKQIEGHTICAL D AAWP QGLIR+FRP +E RIK
Sbjct: 615 VNMIMHRFVTGQAQIAEIDMLFELTKQIEGHTICALADGAAWPPQGLIRNFRPVIEERIK 674
Query: 475 EHAERELLEATA 486
+ A + +A A
Sbjct: 675 KRAAEDQAKAEA 686
>gi|254693013|gb|ACT79356.1| MIP04331p [Drosophila melanogaster]
Length = 704
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/432 (70%), Positives = 350/432 (81%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L D DRIFTNLYG HD LK AMKRGDW++TK+++ KG WIVNE+K SGLRGRGGA
Sbjct: 257 FGPLADADRIFTNLYGRHDWRLKAAMKRGDWYKTKEIIAKGDKWIVNEIKTSGLRGRGGA 316
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFM K DGRP +LVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 317 GFPSGLKWSFMHKPPDGRPKFLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 376
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+ +IYIRGE+ NE NL+ A EAY AG LGKNACGSG+DFD+++ GAGAYICGEET+
Sbjct: 377 NTGFIYIRGEFYNEACNLQYAIIEAYKAGYLGKNACGSGFDFDLYVQRGAGAYICGEETS 436
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGK GKPR KPPFPA+ G++GCP+TVTNVETVAVSPTI RRG +WFASFGR NS
Sbjct: 437 LIESLEGKAGKPRNKPPFPADIGVFGCPSTVTNVETVAVSPTICRRGGNWFASFGRTRNS 496
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHV PCTVEEEMS+P +ELI+RH GGV GGWDNLLA+IPGGSS P + K
Sbjct: 497 GTKLFNISGHVCNPCTVEEEMSMPTRELIERHAGGVIGGWDNLLAIIPGGSSTPCITKEH 556
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
+ DYD L AV+S +GT A+IVM+K TD++ AIARLS FYKHESCGQCTPCREG W
Sbjct: 557 ASSAIHDYDGLMAVRSSMGTGALIVMNKDTDIIKAIARLSAFYKHESCGQCTPCREGLHW 616
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ MIM R G A++ EIDML E+TKQIEGHTICAL D AAWP QGLIR+FRP +E RIK
Sbjct: 617 VNMIMHRFVTGQAQIAEIDMLFELTKQIEGHTICALADGAAWPPQGLIRNFRPVIEERIK 676
Query: 475 EHAERELLEATA 486
+ A + +A A
Sbjct: 677 KRAAEDQAKAEA 688
>gi|45550452|ref|NP_611238.2| CG11423 [Drosophila melanogaster]
gi|45445490|gb|AAF57825.3| CG11423 [Drosophila melanogaster]
Length = 702
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/432 (70%), Positives = 350/432 (81%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L D DRIFTNLYG HD LK AMKRGDW++TK+++ KG WIVNE+K SGLRGRGGA
Sbjct: 255 FGPLADADRIFTNLYGRHDWRLKAAMKRGDWYKTKEIIAKGDKWIVNEIKTSGLRGRGGA 314
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFM K DGRP +LVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 315 GFPSGLKWSFMHKPPDGRPKFLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 374
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+ +IYIRGE+ NE NL+ A EAY AG LGKNACGSG+DFD+++ GAGAYICGEET+
Sbjct: 375 NTGFIYIRGEFYNEACNLQYAIIEAYKAGYLGKNACGSGFDFDLYVQRGAGAYICGEETS 434
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGK GKPR KPPFPA+ G++GCP+TVTNVETVAVSPTI RRG +WFASFGR NS
Sbjct: 435 LIESLEGKAGKPRNKPPFPADIGVFGCPSTVTNVETVAVSPTICRRGGNWFASFGRTRNS 494
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHV PCTVEEEMS+P +ELI+RH GGV GGWDNLLA+IPGGSS P + K
Sbjct: 495 GTKLFNISGHVCNPCTVEEEMSMPTRELIERHAGGVIGGWDNLLAIIPGGSSTPCITKEH 554
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
+ DYD L AV+S +GT A+IVM+K TD++ AIARLS FYKHESCGQCTPCREG W
Sbjct: 555 ASSAIHDYDGLMAVRSSMGTGALIVMNKDTDIIKAIARLSAFYKHESCGQCTPCREGLHW 614
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ MIM R G A++ EIDML E+TKQIEGHTICAL D AAWP QGLIR+FRP +E RIK
Sbjct: 615 VNMIMHRFVTGQAQIAEIDMLFELTKQIEGHTICALADGAAWPPQGLIRNFRPVIEERIK 674
Query: 475 EHAERELLEATA 486
+ A + +A A
Sbjct: 675 KRAAEDQAKAEA 686
>gi|170748473|ref|YP_001754733.1| NADH dehydrogenase I subunit F [Methylobacterium radiotolerans JCM
2831]
gi|170654995|gb|ACB24050.1| NADH-quinone oxidoreductase, F subunit [Methylobacterium
radiotolerans JCM 2831]
Length = 433
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/419 (72%), Positives = 349/419 (83%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+H P L+ A KRG W TK L+ +G DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LSDQDRIFTNLYGLHSPGLEAAKKRGAWDGTKFLLEQGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH L+EGC++A M A A
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCMLACFAMNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E+ L++A EAYAA L+G++ Y FD+++H+GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYVAEKHALQKAVDEAYAARLVGQSNV-HDYPFDIYVHHGAGAYICGEETALIE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+ TILRRG WFA G KNN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAGTILRRGGAWFAGLGGKNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVNKPC VEEE+ I +ELIDRHCGG+RGGWDNLL IPGGSSVPL+P D
Sbjct: 241 LFCVSGHVNKPCNVEEELGITFRELIDRHCGGMRGGWDNLLCSIPGGSSVPLVPAEQIVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ + SGLGTAAVIV+DKSTD+V AI R+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 AKMDFDTLRNLGSGLGTAAVIVLDKSTDIVAAITRISYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+R+ G A+ EIDML EVTKQIEGHTICALGDAAAWP+QGLIRHFRPE+E+RI +
Sbjct: 361 VMQRMTEGRAQKREIDMLFEVTKQIEGHTICALGDAAAWPIQGLIRHFRPEIEKRIDRY 419
>gi|126740382|ref|ZP_01756070.1| NADH-quinone oxidoreductase, F subunit [Roseobacter sp. SK209-2-6]
gi|126718518|gb|EBA15232.1| NADH-quinone oxidoreductase, F subunit [Roseobacter sp. SK209-2-6]
Length = 432
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/418 (72%), Positives = 346/418 (82%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMH+ LKGA RG W T L+ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHERTLKGAQTRGHWDGTAGLIEKGRDWIIQTMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDREIMRHDPH L+EG LIA M A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVINADESEPGTCKDREIMRHDPHTLIEGALIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLG+NA GSG+DFDV +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDECYDKGLLGRNAAGSGWDFDVFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAGFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDK TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKQTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVKGEADLEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 419
>gi|149245198|ref|XP_001527133.1| NADH-quinone oxidoreductase chain F 1 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146449527|gb|EDK43783.1| NADH-quinone oxidoreductase chain F 1 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 491
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/437 (69%), Positives = 361/437 (82%), Gaps = 4/437 (0%)
Query: 46 PPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKK 105
P P + H GGLKD+DRIF N+YG + LK A K GDW++TK+++LKG WI++E+KK
Sbjct: 24 PAANPNRVH-GGLKDQDRIFQNVYGNYGHDLKSAQKMGDWYKTKEIILKGDKWIIDEMKK 82
Query: 106 SGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLL 162
SGLRGRGGAGFPSGLKWSFM + P YLVVNADE EPGTCKDREI+R DPHKL+
Sbjct: 83 SGLRGRGGAGFPSGLKWSFMNPPGWEKNPGPRYLVVNADEGEPGTCKDREIIRKDPHKLV 142
Query: 163 EGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHY 222
EGCL+AG M A+AAYIYIRGE+ NE L+ A EAY AGL+GKNACGSGYDFD++IH
Sbjct: 143 EGCLLAGRAMNATAAYIYIRGEFYNETVILQNAINEAYKAGLIGKNACGSGYDFDIYIHR 202
Query: 223 GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP 282
G GAY+CGEETAL+ES+EGK GKPRLKPPFPA GL+G PTTV NVETV+V+PTILRRG
Sbjct: 203 GMGAYVCGEETALIESIEGKAGKPRLKPPFPAGVGLFGRPTTVANVETVSVAPTILRRGG 262
Query: 283 DWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIP 342
+WF S GR+ NSGTKLFC+SGHVN+PCTVEEEMSIPLKEL+++HCGG++GGWDNLL VIP
Sbjct: 263 EWFDSLGRERNSGTKLFCISGHVNEPCTVEEEMSIPLKELLEKHCGGIKGGWDNLLGVIP 322
Query: 343 GGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESC 402
GGSSVP++PK CD VLMDYDAL+ V SGLGTAAVIVM+K TD++ AI R ++FYKHESC
Sbjct: 323 GGSSVPVMPKETCDTVLMDYDALRDVGSGLGTAAVIVMNKQTDIIRAIQRFAHFYKHESC 382
Query: 403 GQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
GQCTPCREGT WL +M+R + G A EIDM+ E+TK+IEGHTICALGDAAAWP+QGLI
Sbjct: 383 GQCTPCREGTTWLQRMMDRFQTGQATEREIDMIFELTKEIEGHTICALGDAAAWPIQGLI 442
Query: 463 RHFRPELERRIKEHAER 479
+ F+P + RI E+ ++
Sbjct: 443 KSFKPVMIDRINEYQKK 459
>gi|259418795|ref|ZP_05742712.1| NADH oxidoreductase (quinone), f subunit [Silicibacter sp.
TrichCH4B]
gi|259345017|gb|EEW56871.1| NADH oxidoreductase (quinone), f subunit [Silicibacter sp.
TrichCH4B]
Length = 432
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/418 (72%), Positives = 348/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMH+ L GA KRG W T L+ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHERTLAGAQKRGHWDGTAGLIEKGRDWIIQTMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEPGTCKDREIMRHDPH L+EG LIA M A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVINADESEPGTCKDREIMRHDPHTLIEGALIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKNA GSG+DFDV +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDECYDKGLLGKNAAGSGWDFDVFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG +WFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAEWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGEKMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDK TD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKQTDIIKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGEAELEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 419
>gi|46202357|ref|ZP_00208485.1| COG1894: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit [Magnetospirillum magnetotacticum MS-1]
Length = 427
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/418 (72%), Positives = 355/418 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D DRIFTNLYG HD LKGA RGDW TK ++ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LRDSDRIFTNLYGFHDWRLKGAQSRGDWDNTKAILDKGRDWIIEEMKNSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK RP YLV+NADE EPGTCKDRE+MR DPHKL+EG LIA + A AA
Sbjct: 62 TGVKWSFMPKTEGPRPHYLVINADEGEPGTCKDREMMRFDPHKLIEGALIACFAIGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+V E ++L A EA AAGLLG NACGSG+D +V++H GAGAYICGEE+AL+E
Sbjct: 122 YIYIRGEFVLEAEHLNTAIAEARAAGLLGPNACGSGWDCEVYVHRGAGAYICGEESALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV+PTILRRG WF+ G+ NN+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGAAWFSGLGKPNNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEEM IPLK+LI++H GGVRGGWDNLLA+IPGGSSVP+L K C++
Sbjct: 242 VFCISGHVNTPCNVEEEMGIPLKDLIEKHAGGVRGGWDNLLAIIPGGSSVPMLNKQQCEE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+DAL+A++SGLGTAAVIVMDKSTD+V AI RLS FY HESCGQCTPCREGTGW+
Sbjct: 302 VTMDFDALRAMRSGLGTAAVIVMDKSTDLVRAIHRLSRFYWHESCGQCTPCREGTGWMSR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+M R+ G+A+L EID+L+EV++QIEGHTICALGDAAAWP+QGLIR FRPE+ERRIKE
Sbjct: 362 MMGRMVTGDAELSEIDLLEEVSRQIEGHTICALGDAAAWPIQGLIRTFRPEMERRIKE 419
>gi|313238308|emb|CBY13392.1| unnamed protein product [Oikopleura dioica]
gi|313246735|emb|CBY35608.1| unnamed protein product [Oikopleura dioica]
Length = 458
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/425 (70%), Positives = 355/425 (83%), Gaps = 2/425 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
+KD+DRIFTNLYG HD +KGA RGDW++TK+++LKGADWI E+K SGLRGRGGAGFP
Sbjct: 25 MKDQDRIFTNLYGFHDFSIKGAEARGDWYKTKEILLKGADWIQQEMKDSGLRGRGGAGFP 84
Query: 118 SGLKWSFMP-KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFM V+DGRP YLVVNADE EPGTCKDR+IMRHDPHKL+EGCL+AG M A+A
Sbjct: 85 TGLKWSFMNVPVTDGRPKYLVVNADEGEPGTCKDRDIMRHDPHKLIEGCLVAGYAMGATA 144
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIY+RGE+ NE NL A +EAYAAG LG+NACG+GYDFDV++ GAGAY+CGEETAL+
Sbjct: 145 AYIYVRGEFYNETSNLMYAVREAYAAGYLGQNACGTGYDFDVYVQRGAGAYVCGEETALI 204
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGKQGKPRLKPPFPA G +GCPTTV NVET+AV+PTI RRG +WF+SFGR+ N+GT
Sbjct: 205 ESLEGKQGKPRLKPPFPAAIGAFGCPTTVNNVETIAVAPTICRRGAEWFSSFGRERNTGT 264
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SG+VN PCTVEE MSIP++ELI++H GGVRGGWDNLLAVIPGGSS PLLPKHICD
Sbjct: 265 KLFNISGNVNTPCTVEETMSIPMRELIEKHAGGVRGGWDNLLAVIPGGSSTPLLPKHICD 324
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D++MD+DAL A SGLGTAA+IVM+K D V+ I RL FYKHESCGQCTPCREG W+
Sbjct: 325 DIMMDFDALAAAPSGLGTAALIVMNKDDDPVECIWRLMEFYKHESCGQCTPCREGVSWMN 384
Query: 417 MIMERLKVGNAK-LEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
I++R G ++ EEI+ L E++KQ+EG+TICAL D AAWP QGLIR F+P LE R E
Sbjct: 385 DILKRWTFGQSRGPEEIEQLWEISKQVEGNTICALADGAAWPAQGLIRWFKPYLEERFAE 444
Query: 476 HAERE 480
R+
Sbjct: 445 DVRRQ 449
>gi|258542717|ref|YP_003188150.1| NADH dehydrogenase I subunit F [Acetobacter pasteurianus IFO
3283-01]
gi|384042638|ref|YP_005481382.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-12]
gi|384051155|ref|YP_005478218.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-03]
gi|384054263|ref|YP_005487357.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-07]
gi|384057497|ref|YP_005490164.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-22]
gi|384060138|ref|YP_005499266.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-26]
gi|384063430|ref|YP_005484072.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-32]
gi|384119440|ref|YP_005502064.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421853771|ref|ZP_16286430.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|256633795|dbj|BAH99770.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-01]
gi|256636854|dbj|BAI02823.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-03]
gi|256639907|dbj|BAI05869.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-07]
gi|256642963|dbj|BAI08918.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-22]
gi|256646018|dbj|BAI11966.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-26]
gi|256649071|dbj|BAI15012.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-32]
gi|256652058|dbj|BAI17992.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655115|dbj|BAI21042.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus IFO
3283-12]
gi|371477989|dbj|GAB31633.1| NADH-quinone oxidoreductase chain F [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 442
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/419 (70%), Positives = 352/419 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D L A KRGDW T ++ KG D +V E+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGQDDWRLPAARKRGDWENTAAIIAKGRDAVVAEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLV+N DESEPGTCKDRE+MRH+PHKL+E +IA M A A+
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVINGDESEPGTCKDREVMRHEPHKLIESAMIASFAMGAHAS 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ E + L+ A EAY AGLLGKNA GSG+DFD IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFCREAERLQAAIDEAYEAGLLGKNAAGSGWDFDFRIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA AGLYGCPTTV NVE++AV+ TI+RRG WF+ GR NN+GTK
Sbjct: 182 SLEGKKGQPRMKPPFPAGAGLYGCPTTVNNVESIAVTSTIMRRGAAWFSGLGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +PLKE+I++H GGVRGGWDNLLAVIPGG SVP+LPK IC+
Sbjct: 242 LMAISGHVNTPCVFEEELGVPLKEIIEKHGGGVRGGWDNLLAVIPGGCSVPVLPKSICET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A +SGLGTA +IVMDKSTD+++AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAERSGLGTACMIVMDKSTDIIEAIARFSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M R+ G A++EEID+L++VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+E RI+++
Sbjct: 362 MMNRMVQGTAEIEEIDLLEQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEMEARIRQY 420
>gi|427428435|ref|ZP_18918476.1| NADH-ubiquinone oxidoreductase chain F [Caenispirillum salinarum
AK4]
gi|425882168|gb|EKV30850.1| NADH-ubiquinone oxidoreductase chain F [Caenispirillum salinarum
AK4]
Length = 429
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/418 (72%), Positives = 352/418 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG HD L GA KRGDW TK L+ +G + I+ EV+ SGLRGRGGAGFP
Sbjct: 2 LRDQDRIFTNLYGFHDWRLAGARKRGDWDNTKALLERGREAIIKEVQDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADE EPGTCKDR++MRHDPHKL+EGCL+A M A AA
Sbjct: 62 TGLKWSFMPKEVGERPHYLVVNADEGEPGTCKDRDMMRHDPHKLIEGCLLASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+V E NLE A EA AGL+G NACGSG+DF+ ++H GAGAYICGEETAL++
Sbjct: 122 YIYIRGEFVQEALNLEYAIAEAREAGLIGPNACGSGWDFECYVHRGAGAYICGEETALIQ 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA G++GCPTTV NVE++AV PTILRRG +WFA+ GR N+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGVWGCPTTVNNVESIAVVPTILRRGGEWFANLGRPKNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEEM IPLKELI++H GGVRGGWDNLLA+IPGGSSVP+L K DD
Sbjct: 242 VFCISGHVNNPCNVEEEMGIPLKELIEKHAGGVRGGWDNLLAIIPGGSSVPVLDKATADD 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+D+L+ SGLGTAAV+VMDKSTD+V IARLS FY HESCGQCTPCREG+GWLW
Sbjct: 302 VLMDFDSLRDAGSGLGTAAVMVMDKSTDIVKVIARLSRFYMHESCGQCTPCREGSGWLWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+MER+ G+A +EEIDML +V+KQIEGHTICALGDAAAWPVQGLIR FRP +E++I E
Sbjct: 362 VMERMARGDATVEEIDMLFDVSKQIEGHTICALGDAAAWPVQGLIRRFRPAMEQKILE 419
>gi|86137594|ref|ZP_01056171.1| NADH-quinone oxidoreductase, F subunit [Roseobacter sp. MED193]
gi|85825929|gb|EAQ46127.1| NADH-quinone oxidoreductase, F subunit [Roseobacter sp. MED193]
Length = 432
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/418 (72%), Positives = 346/418 (82%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMH+ LKGA RG W T L+ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHERTLKGAQARGHWDGTSGLIEKGRDWIIQTMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEPGTCKDREIMRHDPH L+EG LIA M A
Sbjct: 62 TGLKWSFMPKESDGRPSYLVINADESEPGTCKDREIMRHDPHTLIEGALIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLG+NA GSG+DFDV +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDECYDKGLLGRNAAGSGWDFDVFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAGFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDK TD++ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKQTDIIKAIWRLAKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVKGEADLEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIK 419
>gi|99080589|ref|YP_612743.1| NADH dehydrogenase I subunit F [Ruegeria sp. TM1040]
gi|99036869|gb|ABF63481.1| NADH-quinone oxidoreductase F subunit [Ruegeria sp. TM1040]
Length = 432
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/418 (72%), Positives = 348/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGMH+ L GA KRG W T L+ KG DWI+ +K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMHERTLAGAQKRGHWDGTAGLIEKGRDWIIQTMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEPGTCKDREIMRHDPH L+EG LIA M A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVINADESEPGTCKDREIMRHDPHTLIEGALIASFAMNAHTC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKNA GSG+DFD+ +H+GAGAYICGEETAL+E
Sbjct: 122 YIYLRGEYIREREALQAAIDECYDKGLLGKNAAGSGWDFDLFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG +WFA FGR+NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAEWFAGFGRQNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI++HCGG+RGGWDNLLAVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIEKHCGGIRGGWDNLLAVIPGGSSVPCVRGEKMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMDK TD+V AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDKQTDIVKAIWRLSKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A+LEEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGEAELEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 419
>gi|260428309|ref|ZP_05782288.1| NADH oxidoreductase (quinone), f subunit [Citreicella sp. SE45]
gi|260422801|gb|EEX16052.1| NADH oxidoreductase (quinone), f subunit [Citreicella sp. SE45]
Length = 431
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 292/417 (70%), Positives = 351/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYGMHD L+GA KRG W T D++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNLYGMHDRTLEGAKKRGHWDGTADIIGKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEP TCKDREIMRHDPH L+EG LIA M A AA
Sbjct: 62 TGLKWSFMPKESDGRPSYLVINADESEPATCKDREIMRHDPHTLIEGALIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY G++G+NACG+G+DFD+++H+GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDKGMIGRNACGTGWDFDLYLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA +GLYGCPTTV NVE++AV PTILRRG WF+ FGRKNNSGTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVVPTILRRGASWFSGFGRKNNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L ++GHVN PC EEEMS+ ++E+I++H GG+RGGWDNL A+IPGG+S P+LPKH +D
Sbjct: 242 LMALTGHVNTPCVFEEEMSLSVREIIEKHGGGIRGGWDNLKAIIPGGASCPVLPKHALED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ D+D ++ +S GT +IVMD S DVV A+ RLS F+KHESCGQCTPCREGTGW+
Sbjct: 302 AIFDFDWMRENRSSFGTGCMIVMDNSVDVVKAVWRLSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVTGEAEVEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|385234312|ref|YP_005795654.1| NADH dehydrogenase [ubiquinone] flavoprotein 1 [Ketogulonicigenium
vulgare WSH-001]
gi|343463223|gb|AEM41658.1| NADH dehydrogenase [ubiquinone] flavoprotein 1 [Ketogulonicigenium
vulgare WSH-001]
Length = 424
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/418 (71%), Positives = 348/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG HD L GA RG + T ++ KG DWIVNE+K SGLRGRGGAGF
Sbjct: 2 LSDQDRIFTNIYGQHDRSLAGAQMRGHFDGTAGIIAKGRDWIVNEMKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SD RP+YLVVNADESEPGTCKDREI+RH+P L+EGCL+A + A A
Sbjct: 62 TGLKWSFMPKDSD-RPAYLVVNADESEPGTCKDREILRHEPFALIEGCLVASFAINAHAC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A Y AGLLG NA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 121 YIYIRGEYIREREALQAAIDACYDAGLLGANAAGSGWDFDLYLHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+ FGR NN+GTK
Sbjct: 181 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGASWFSGFGRPNNAGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN+PC VEEEMSIP +ELIDRHCGG+RGGWDNL VIPGGSSVP+LP + +
Sbjct: 241 LFAISGHVNRPCIVEEEMSIPFRELIDRHCGGIRGGWDNLKGVIPGGSSVPVLPASVMGE 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D L+A QSGLGTAAVIVMD+S D+V AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDWLRAQQSGLGTAAVIVMDQSVDIVKAIWRLSKFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+MERL G A EIDML EVTKQ+EGHTICALGDAAAWP+QGL+RHFRPE+E R+ +
Sbjct: 361 VMERLVAGTADPAEIDMLIEVTKQVEGHTICALGDAAAWPIQGLVRHFRPEIEARLHQ 418
>gi|159043865|ref|YP_001532659.1| NADH dehydrogenase subunit I F [Dinoroseobacter shibae DFL 12]
gi|157911625|gb|ABV93058.1| NADH-quinone oxidoreductase, F subunit [Dinoroseobacter shibae DFL
12]
Length = 433
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/430 (71%), Positives = 353/430 (82%), Gaps = 1/430 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YGMHD L GA KRG W T L+ G D IV +K SGLRGRGGAGFP
Sbjct: 2 LQDQDRIFTNIYGMHDRTLAGARKRGHWDGTDKLIQMGRDDIVKIMKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A+
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMGAHAS 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AGLLGKNA GSG+DFD+++ +GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYEAGLLGKNAAGSGWDFDLYLTHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAQFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN+PC VEE MSI +ELID+HCGG+RGGWDNL AVIPGGSSVP + D
Sbjct: 242 LFAISGHVNQPCVVEEAMSISFEELIDKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ + SGLGTAAVIVMD+STD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRGELGSGLGTAAVIVMDQSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+RL G A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 RVMDRLVRGEAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIKAQ 421
Query: 477 AERELLEATA 486
+ A A
Sbjct: 422 KTGRVTAALA 431
>gi|254461305|ref|ZP_05074721.1| NADH oxidoreductase (quinone), F subunit [Rhodobacterales bacterium
HTCC2083]
gi|206677894|gb|EDZ42381.1| NADH oxidoreductase (quinone), F subunit [Rhodobacteraceae
bacterium HTCC2083]
Length = 433
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/430 (70%), Positives = 352/430 (81%), Gaps = 1/430 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYGMHD LKGA RG W T ++ KG DW+++++K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNLYGMHDRTLKGAQARGHWDGTAAIIKKGRDWVIDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY AGL+GKNA SG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDAGLVGKNAAKSGWDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+SFGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSSFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSI +ELI+ HCGG++GGWDNL AVIPGGSSVP + D
Sbjct: 242 LFAISGHVNNPCVVEEAMSISFEELIETHCGGIKGGWDNLKAVIPGGSSVPCVRGEKMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
MD+D L+ + SGLGTAAVIVMDK TD++ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 ATMDFDYLRNDLGSGLGTAAVIVMDKDTDIIKAIWRLAKFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL GNA EIDML +VTKQ+EGHTICALGDAAAWP+QGLI +FR E+E RIK
Sbjct: 362 RVMERLVHGNADPSEIDMLWDVTKQVEGHTICALGDAAAWPIQGLINNFRDEIEDRIKAQ 421
Query: 477 AERELLEATA 486
+ A A
Sbjct: 422 ISGKTTRAVA 431
>gi|163850512|ref|YP_001638555.1| NADH dehydrogenase I subunit F [Methylobacterium extorquens PA1]
gi|218529209|ref|YP_002420025.1| NADH dehydrogenase I subunit F [Methylobacterium extorquens CM4]
gi|240137577|ref|YP_002962048.1| NADH-quinone oxidoreductase subunit F [Methylobacterium extorquens
AM1]
gi|254560048|ref|YP_003067143.1| NADH-quinone oxidoreductase subunit F [Methylobacterium extorquens
DM4]
gi|418058651|ref|ZP_12696620.1| NADH-quinone oxidoreductase, F subunit [Methylobacterium extorquens
DSM 13060]
gi|163662117|gb|ABY29484.1| NADH-quinone oxidoreductase, F subunit [Methylobacterium extorquens
PA1]
gi|218521512|gb|ACK82097.1| NADH-quinone oxidoreductase, F subunit [Methylobacterium extorquens
CM4]
gi|240007545|gb|ACS38771.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
[Methylobacterium extorquens AM1]
gi|254267326|emb|CAX23158.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
[Methylobacterium extorquens DM4]
gi|373567796|gb|EHP93756.1| NADH-quinone oxidoreductase, F subunit [Methylobacterium extorquens
DSM 13060]
Length = 433
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/428 (70%), Positives = 352/428 (82%), Gaps = 1/428 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+H P L+ A KRG W TK L+ G DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADQDRIFTNLYGLHSPGLEAAKKRGAWDGTKFLLDMGRDWIIDEMKGSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLLASFAMGAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E+ L+RA EAY A L+G + Y FD+++H+GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYVAEKFALQRAVDEAYEARLVGPSNI-HDYPFDIYVHHGAGAYICGEETALIE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+ TILRRG WFA G KNN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAGTILRRGGAWFAGLGGKNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVNKPC VEEE+ I +ELID+HCGG+RGGWDNLL IPGGSSVPL+P D
Sbjct: 241 LFCVSGHVNKPCNVEEELGITFRELIDKHCGGMRGGWDNLLCSIPGGSSVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ + SGLGTAAVIV+DKSTD+V AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 AKMDFDTLRNLGSGLGTAAVIVLDKSTDIVGAIARISYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ R+ G A+ EIDML EVTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+E+RI +++
Sbjct: 361 VLTRMAAGRAQKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIEKRIDQYS 420
Query: 478 ERELLEAT 485
++A
Sbjct: 421 ANPHMDAV 428
>gi|329850724|ref|ZP_08265569.1| NADH oxidoreductase quinone, F subunit [Asticcacaulis biprosthecum
C19]
gi|328841039|gb|EGF90610.1| NADH oxidoreductase quinone, F subunit [Asticcacaulis biprosthecum
C19]
Length = 437
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/427 (70%), Positives = 356/427 (83%), Gaps = 1/427 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG HD L+GA +RG W+ T+D++ GA WI++ VK SGLRGRGGAG
Sbjct: 3 GILEDKDRIFTNLYGFHDWGLEGAKQRGCWNATRDILSYGAPWIIDNVKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
F +GLKWSFMPK RP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M+A
Sbjct: 63 FSTGLKWSFMPKEVKDRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASFAMQAH 122
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A YIY+RGEY+ ER+ LE A ++AY A L+GKN G+DFDV++H+GAGAYICGEETAL
Sbjct: 123 ACYIYLRGEYILERERLEAAVKQAYEAKLIGKNNV-HGWDFDVYVHHGAGAYICGEETAL 181
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
LESLEGK+G+PRLKPPFPA +GLYGCPTTV NVE++AV TILRRG WFASFG NN+G
Sbjct: 182 LESLEGKKGQPRLKPPFPAGSGLYGCPTTVNNVESIAVVGTILRRGAAWFASFGAPNNTG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKLFC+SGHV +PC VEE MSIP ++LI+ HCGG+RGGW NL AVIPGGSSVP++P C
Sbjct: 242 TKLFCISGHVERPCNVEEAMSIPFRKLIEDHCGGIRGGWGNLKAVIPGGSSVPMIPAEQC 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
+++ MD+D L+ ++SGLGTAAVIVMDKSTD++ AIARLSYFYKHESCGQCTPCREGTGW+
Sbjct: 302 ENLAMDFDTLRNLKSGLGTAAVIVMDKSTDLIRAIARLSYFYKHESCGQCTPCREGTGWM 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
W +MER+ G+A+ EID L EVT Q+EGHTICALGDAAAWP+QGLIRHFRPE+E RI
Sbjct: 362 WRVMERMVKGDAEPSEIDTLLEVTTQVEGHTICALGDAAAWPIQGLIRHFRPEIEARIAA 421
Query: 476 HAERELL 482
+ R +
Sbjct: 422 YRSRRAI 428
>gi|188580280|ref|YP_001923725.1| NADH dehydrogenase I subunit F [Methylobacterium populi BJ001]
gi|179343778|gb|ACB79190.1| NADH-quinone oxidoreductase, F subunit [Methylobacterium populi
BJ001]
Length = 433
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/428 (70%), Positives = 350/428 (81%), Gaps = 1/428 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG H P L A KRG W TK L+ G DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LSDQDRIFTNLYGQHSPGLDAAKKRGAWDGTKFLLEMGRDWIIDEMKGSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH L+EGC++A M A A
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCMLASFAMGAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E+ L+RA EAY A L+G + Y FD+++H+GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYVAEKFALQRAVDEAYEARLVGPSNI-HDYPFDIYVHHGAGAYICGEETALIE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+ TILRRG WFA G KNN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAGTILRRGGAWFAGLGGKNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVNKPC VEEE+ I +ELIDRHCGG+RGGWDNLL IPGGSSVPL+P D
Sbjct: 241 LFCVSGHVNKPCNVEEELGITFRELIDRHCGGMRGGWDNLLCSIPGGSSVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ + SGLGTAAVIV+DKSTD+V AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 AKMDFDTLRNLGSGLGTAAVIVLDKSTDIVGAIARISYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ R+ G A+ EIDML EVTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+E+RI +++
Sbjct: 361 VLTRMAAGRAQKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRHFRPEIEKRIDQYS 420
Query: 478 ERELLEAT 485
++A
Sbjct: 421 ANPHMDAV 428
>gi|349699175|ref|ZP_08900804.1| NADH dehydrogenase I subunit F [Gluconacetobacter europaeus LMG
18494]
Length = 441
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/419 (70%), Positives = 352/419 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG +D L GA RGDW T D++ +G D I++E+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGQNDWTLAGARARGDWDGTADILARGRDAIISEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLV+N DESEPGTCKDREI+RHDPHKL+E LIA M A AA
Sbjct: 62 TGVKWSFMPKKNDGRPHYLVINGDESEPGTCKDREILRHDPHKLVESALIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE +L+ A EAYAAGL+G+NACGSG+DFD +IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFYNEAMHLQHAIDEAYAAGLIGRNACGSGWDFDFYIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA GLYGCPTTV NVE++AVS TILRRG WF+ GR NN+GTK
Sbjct: 182 SLEGKKGQPRMKPPFPAAMGLYGCPTTVNNVESIAVSATILRRGAAWFSGLGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +P+KELI++H GGVRGGWDNLLAVIPGG SVP+LP+ +CD
Sbjct: 242 LMAISGHVNTPCVFEEELGVPMKELIEKHGGGVRGGWDNLLAVIPGGCSVPMLPRDVCDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A SGLGT +IVMDKSTD++ AIAR S F+K+ESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAEGSGLGTGCMIVMDKSTDIIAAIARFSKFFKYESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IMER+ G A++EEIDML++VT+Q+EGHTICALGDAAAWP+QGLIR FRP +E RI +
Sbjct: 362 IMERMVEGRAEIEEIDMLEQVTRQVEGHTICALGDAAAWPIQGLIRRFRPVMEERIHAY 420
>gi|393725294|ref|ZP_10345221.1| NADH dehydrogenase I subunit F [Sphingomonas sp. PAMC 26605]
Length = 434
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/419 (72%), Positives = 347/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG L A+ RGDW TK L+ G D +++ VK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNVYGYQPWNLDAAIMRGDWDDTKGLMALGQDALIDAVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDG-RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G KWSFMPK RP++LV+NADESEPG+CKDREI+RHDPHKL+EG LIAG MRA A
Sbjct: 62 TGTKWSFMPKEPKADRPNFLVINADESEPGSCKDREIIRHDPHKLIEGALIAGFAMRARA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY+ E + L A EAY GL+GKNA GSGYDFDV H GAGAYICGEETA+L
Sbjct: 122 AYIYIRGEYIREAEVLFAAIAEAYDKGLIGKNASGSGYDFDVFCHRGAGAYICGEETAML 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV PTILRR P+WFASFG +NN GT
Sbjct: 182 ESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRSPEWFASFGAENNRGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN PC VEE MSI +ELI+ HCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 242 KLFQISGHVNTPCVVEEAMSITFRELIETHCGGIRGGWDNLLAVIPGGSSVPLVPAAEIM 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D LK V SGLGTAA+IVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 302 DCPMDFDGLKKVGSGLGTAAIIVMDKSTDIVRAISRLSYFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+MER++ G+A + EID L +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+ERRI E
Sbjct: 362 RVMERMRTGDADISEIDTLYQVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMERRITE 420
>gi|219112977|ref|XP_002186072.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582922|gb|ACI65542.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 493
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/419 (71%), Positives = 352/419 (84%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
F L D+DRIFTNLYG D L A+KRGD+H TK+++ G DWI+ E+K SGLRGRGGA
Sbjct: 36 FNFLSDQDRIFTNLYGEQDWRLPDAIKRGDYHLTKEIMCMGPDWIIQEIKDSGLRGRGGA 95
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSGLKWSFMPK +DGRPS+LVVNADESEPGTCKDREIMR DPHKL+EGC++AG MRA
Sbjct: 96 GFPSGLKWSFMPKETDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCILAGYAMRA 155
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGEY NE L+ A EAYAAGLLGKNACGSGYD+D+++H GAGAYICGEETA
Sbjct: 156 RAAYIYIRGEYFNEAVVLDEAIHEAYAAGLLGKNACGSGYDYDIYLHRGAGAYICGEETA 215
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA GL+GCP+TVTNVETVAV+PTILRRG WFASFG +NN
Sbjct: 216 LIESLEGKQGKPRLKPPFPAGVGLFGCPSTVTNVETVAVAPTILRRGASWFASFGNENNR 275
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHV P VEE MSIPL++LID+HCGG+R GW+++ A IPGGSSVP+L K
Sbjct: 276 GTKLFAISGHVKNPMVVEESMSIPLRDLIDKHCGGMRNGWESVQACIPGGSSVPVLNKDQ 335
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C + LM++D L+A SGLGTAAV + D + D+V AI RLS+FYKHESCGQCTPCREGTGW
Sbjct: 336 CGEALMEFDDLRAKGSGLGTAAVTMFDNTVDMVGAIRRLSHFYKHESCGQCTPCREGTGW 395
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
L I+ R++ G+A EI ML+E+++QIEGHTICALGDAAAWPVQGL+RHF+ ++E RI
Sbjct: 396 LEDILIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQGLLRHFKKDIEDRI 454
>gi|384918709|ref|ZP_10018778.1| NADH dehydrogenase I subunit F [Citreicella sp. 357]
gi|384467422|gb|EIE51898.1| NADH dehydrogenase I subunit F [Citreicella sp. 357]
Length = 431
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 292/417 (70%), Positives = 351/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYGMHD L GA +RG W T D++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNLYGMHDRSLAGAKQRGHWDGTADIIGKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEP TCKDREIMRHDPH L+EG LIA M+A +
Sbjct: 62 TGLKWSFMPKESDGRPAYLVINADESEPATCKDREIMRHDPHTLIEGALIASFAMQAHTS 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A E Y AGLLG+NA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDECYEAGLLGRNAAGSGWDFDLYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG WF+ FGRKNNSGTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVCPTILRRGASWFSGFGRKNNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L ++GH+N PC EEEMS+ ++E+I++H GGVRGGWDNL A+IPGG+S P+LPK +D
Sbjct: 242 LMALTGHINTPCVFEEEMSLSVREIIEKHGGGVRGGWDNLKAIIPGGASCPVLPKAALED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ D+D ++ +S GT +IVMD++TDV+ AI RLS F+KHESCGQCTPCREGTGW+
Sbjct: 302 AIFDFDWMRENKSSFGTGCMIVMDQNTDVIKAIWRLSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVTGDAEVEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIK 418
>gi|73667105|ref|YP_303121.1| NADH dehydrogenase I subunit F [Ehrlichia canis str. Jake]
gi|72394246|gb|AAZ68523.1| NADH dehydrogenase subunit F [Ehrlichia canis str. Jake]
Length = 427
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/425 (69%), Positives = 347/425 (81%), Gaps = 1/425 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD DR+FTNLYG PFLK A RG W +++ G D I+ EVKKSGLRGRGGAGF
Sbjct: 2 LKDSDRVFTNLYGQQSPFLKSAKSRGVWSNILEILNLGPDHIIQEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK DG+P+YLVVNADESEPGTCKDR+I+R+DPH+L+EG LIAG M +
Sbjct: 62 TGLKWSFMPKTRKDGQPAYLVVNADESEPGTCKDRDILRYDPHRLIEGILIAGFAMNVTT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AY+YIRGE+ NE L +A EAY A L+GKNACGSGYD D+ IH GAGAYICGEETA L
Sbjct: 122 AYVYIRGEFYNEYLVLSKALDEAYKAKLIGKNACGSGYDLDIFIHRGAGAYICGEETAQL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG++G PRLKPPFPA GLYGCPTT+ NVET+A I+RRG DWFAS G++NN+GT
Sbjct: 182 ESLEGRKGMPRLKPPFPAAIGLYGCPTTINNVETIATVSEIMRRGSDWFASLGKENNTGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVN PC VEEE+ IP+KELI+++ GGVRGGWDNLLAVIPGGSSVP+LPK ICD
Sbjct: 242 KIFCISGHVNNPCNVEEELGIPMKELIEKYAGGVRGGWDNLLAVIPGGSSVPMLPKSICD 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
V MD+D+L+AVQSGLGTA +IVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 302 TVTMDFDSLRAVQSGLGTAGLIVMDKSTDLIAAIERLSHFYMHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IM+++ G+A E ID+L +T Q+EGHTICALGDAAAWP+QGLIRHFR +E RIK +
Sbjct: 362 RIMQKMVKGDATSESIDLLLNITHQVEGHTICALGDAAAWPIQGLIRHFRDVIEDRIKNY 421
Query: 477 AEREL 481
L
Sbjct: 422 NSSRL 426
>gi|448089310|ref|XP_004196771.1| Piso0_003996 [Millerozyma farinosa CBS 7064]
gi|448093564|ref|XP_004197802.1| Piso0_003996 [Millerozyma farinosa CBS 7064]
gi|359378193|emb|CCE84452.1| Piso0_003996 [Millerozyma farinosa CBS 7064]
gi|359379224|emb|CCE83421.1| Piso0_003996 [Millerozyma farinosa CBS 7064]
Length = 488
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/434 (70%), Positives = 359/434 (82%), Gaps = 4/434 (0%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P + H GGLKD+DRIF N+YG + LK A K GDW++TK++V KG WI++E+KKSGLR
Sbjct: 26 PNRIH-GGLKDQDRIFQNVYGKYGHDLKSAQKMGDWYKTKEIVQKGDKWIIDELKKSGLR 84
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFP+GLK+SFM + P YLV+NADE EPGTCKDREI+R DPHKL+EGCL
Sbjct: 85 GRGGAGFPTGLKYSFMNPPGWEKNVGPRYLVINADEGEPGTCKDREIIRKDPHKLVEGCL 144
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+ G M A+AAYIYIRGE+ NE L+ A EAY AGL+GKNACGSGYDFDV+IH G GA
Sbjct: 145 VVGRAMNATAAYIYIRGEFYNEAVILQGAINEAYRAGLIGKNACGSGYDFDVYIHRGMGA 204
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ES+EGK GKPRLKPPFPA GL+G P+TVTNVETVAV PTI+RRG +WFA
Sbjct: 205 YICGEETALIESIEGKAGKPRLKPPFPAGVGLFGRPSTVTNVETVAVCPTIVRRGGEWFA 264
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
SFGR+ N+GTKLFCVSGHVN+PCTVEEEMSIPLKEL+++HCGGV+GGWDNLL VIPGG S
Sbjct: 265 SFGRERNAGTKLFCVSGHVNEPCTVEEEMSIPLKELLEKHCGGVKGGWDNLLGVIPGGCS 324
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP++PK +CD+VLMDYDAL+ SGLGTAAVIVM+K TD++ AI+R S FYKHESCGQCT
Sbjct: 325 VPIMPKAVCDNVLMDYDALRDEGSGLGTAAVIVMNKQTDIIQAISRFSAFYKHESCGQCT 384
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT WL +M R G A +EIDM+ E+TK+IEGHTIC LGDA+AWPVQGLI+ FR
Sbjct: 385 PCREGTAWLEKMMARFVKGQASEKEIDMIFELTKEIEGHTICGLGDASAWPVQGLIKSFR 444
Query: 467 PELERRIKEHAERE 480
P +E RIK + E +
Sbjct: 445 PVMEERIKAYKEND 458
>gi|330994059|ref|ZP_08317989.1| NADH-quinone oxidoreductase chain 1 [Gluconacetobacter sp. SXCC-1]
gi|329759005|gb|EGG75519.1| NADH-quinone oxidoreductase chain 1 [Gluconacetobacter sp. SXCC-1]
Length = 454
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/419 (70%), Positives = 351/419 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D L GA RGDW T +++ +G D I+NE+K SGLRGRGGAGFP
Sbjct: 15 LQDKDRIFTNLYGQGDWTLAGARARGDWDGTAEILARGRDAIINEMKASGLRGRGGAGFP 74
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLV+N DESEPGTCKDREI+RHDPHKL+E LIA M A AA
Sbjct: 75 TGVKWSFMPKKNDGRPHYLVINGDESEPGTCKDREILRHDPHKLVESALIASFAMGAHAA 134
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE +L+ A EAYAAGL+G NACGSG+DFD +IH GAGAYICGEETALLE
Sbjct: 135 YIYIRGEFYNEAMHLQHAIDEAYAAGLIGPNACGSGWDFDFYIHRGAGAYICGEETALLE 194
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA GLYGCPTTV NVE++AVS TILRRG WF+ GR NN+GTK
Sbjct: 195 SLEGKKGQPRMKPPFPAAMGLYGCPTTVNNVESIAVSATILRRGAAWFSGLGRPNNAGTK 254
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +P++ELI++H GGVRGGWDNLLAVIPGG SVP+LP+ +CD
Sbjct: 255 LMAISGHVNTPCVFEEELGVPMRELIEKHGGGVRGGWDNLLAVIPGGCSVPMLPRDVCDT 314
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A SGLGT +IVMDKSTD++ AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 315 VLMDYDSLRAEGSGLGTGCMIVMDKSTDIIAAIARFSKFFKHESCGQCTPCREGTGWMMR 374
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IM+R+ G A++EEIDML++VT+Q+EGHTICALGDAAAWP+QGLIR FRP +E RI+ +
Sbjct: 375 IMDRMVQGRAEIEEIDMLEQVTRQVEGHTICALGDAAAWPIQGLIRRFRPVMEERIRAY 433
>gi|407785303|ref|ZP_11132451.1| NADH dehydrogenase I subunit F [Celeribacter baekdonensis B30]
gi|407203335|gb|EKE73322.1| NADH dehydrogenase I subunit F [Celeribacter baekdonensis B30]
Length = 431
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 291/417 (69%), Positives = 351/417 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGM+D L GA KRG W T ++ G DWI++++K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMNDRSLAGAQKRGHWDGTAGIMANGRDWIIDQMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEP TCKDREIMRHDPH L+EG LIAG M A AA
Sbjct: 62 TGLKWSFMPKESDGRPAYLVINADESEPATCKDREIMRHDPHTLVEGALIAGFAMGACAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY AGL+G+NAC SGYDFDV++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDAGLIGRNACKSGYDFDVYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG +WF+SFGR NN GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAEWFSSFGRPNNVGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF ++GHVN PC EE MS+P++ELI+RH GG+RGGWDNL A+IPGG+S P+LPK +D
Sbjct: 242 LFALTGHVNTPCVFEESMSMPVRELIERHGGGIRGGWDNLKAIIPGGASCPILPKDALED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ +S GT +I+MD S DV+ A+ RL+ F+KHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDWMRENKSSFGTGCMIIMDNSVDVIKAVWRLASFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G+A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRH+R E+E RIK
Sbjct: 362 VMDRLVTGDAEIEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHYREEIEDRIK 418
>gi|418936750|ref|ZP_13490445.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. PDO1-076]
gi|375056545|gb|EHS52725.1| NADH-quinone oxidoreductase, F subunit [Rhizobium sp. PDO1-076]
Length = 434
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/424 (69%), Positives = 353/424 (83%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NEVK SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGLKDKSLKGAMARGHWDGTKQILEKGRDWIINEVKNSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A E Y AGLLGKN GYD D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFMREREALQAAIDECYDAGLLGKNN-KLGYDIDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+SFGR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWFSSFGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN+PCTVEE M I +E+I++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFMISGHVNRPCTVEESMGITFREMIEKHGGGIRGGWDNLLAVIPGGASCPVVKAEDMMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V++D+D L+ V+S GT +IVMDKSTD++ AI R+S F+KHESCGQCTPCREGTGW+
Sbjct: 301 VVLDFDGLREVKSSFGTGGMIVMDKSTDIIKAIWRISAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E RI ++
Sbjct: 361 VMERMVKGNAQKREIDMLFQVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEARIDQYT 420
Query: 478 EREL 481
+
Sbjct: 421 RNAI 424
>gi|372281576|ref|ZP_09517612.1| NADH dehydrogenase I subunit F [Oceanicola sp. S124]
Length = 433
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/419 (70%), Positives = 346/419 (82%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGM+D LKGA RG W T ++ G DWI+ +VK SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMNDRTLKGAQARGHWDGTAGILANGRDWIIQQVKDSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEP TCKDREIMRHDPH L+EGCLIAG M A AA
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPATCKDREIMRHDPHTLVEGCLIAGFAMNAVAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY AGL+GKNAC SGY FDV +H+GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDAGLIGKNACKSGYSFDVFLHHGAGAYICGEETALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WF+SFGR NN+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFSSFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L ++GHVN PC EE+MS+ ++E+I+ H GGVRGGWDNL A+IPGG+S P+LPK +D
Sbjct: 242 LMALTGHVNNPCVFEEQMSLSVREIIEHHGGGVRGGWDNLKAIIPGGASCPVLPKDKLED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ D+D ++ QS GT +IVMD S DVV A+ RLS F+KHESCGQCTPCREGTGW+
Sbjct: 302 AIFDFDWMRQNQSSFGTGCMIVMDNSVDVVKAVWRLSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+RL G A+ EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVTGQAEPEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFRDEIEDRIKRQ 420
>gi|254437215|ref|ZP_05050709.1| NADH oxidoreductase (quinone), F subunit [Octadecabacter
antarcticus 307]
gi|198252661|gb|EDY76975.1| NADH oxidoreductase (quinone), F subunit [Octadecabacter
antarcticus 307]
Length = 428
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 299/416 (71%), Positives = 347/416 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYGMHD LKGA RG W T ++ KG +WI++ +K SGLRGRGGAGFP
Sbjct: 3 LADKDRIFTNLYGMHDRTLKGAQARGHWDGTAGIIKKGREWIIDNMKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A+A
Sbjct: 63 TGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANAC 122
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A E Y AG++GKNA SG+DFD+++ +GAGAYICGEETALLE
Sbjct: 123 YIYIRGEYIREKEALQAAIDECYEAGMVGKNASKSGWDFDIYLVHGAGAYICGEETALLE 182
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG DWFA FGR NN+GTK
Sbjct: 183 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGSDWFAGFGRPNNAGTK 242
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE MSIP +ELI++HC G+RGGW NL AVIPGG+SVP++ D
Sbjct: 243 LFAISGHVNNPCVVEESMSIPFEELIEKHCDGIRGGWGNLKAVIPGGASVPMVRGENMRD 302
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+DALK S LGTAAVIVMDK TDV+ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 303 AIMDFDALKEKGSSLGTAAVIVMDKDTDVIKAIWRLAKFYKHESCGQCTPCREGTGWMMR 362
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+MERL G+A +EEIDML +VTKQ+EGHTICALGDAAAWP+QGLI++FR E+E RI
Sbjct: 363 VMERLVKGDADVEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIKNFRGEIEDRI 418
>gi|428168876|gb|EKX37816.1| F subunit of NADH-ubiquinone oxidoreductase [Guillardia theta
CCMP2712]
Length = 466
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 290/420 (69%), Positives = 352/420 (83%)
Query: 57 GLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGF 116
GLKD+DRIF N+YG HD +KGAMKRGD++ TK++V KG ++ +NE+K SGLRGRGGAGF
Sbjct: 41 GLKDQDRIFQNIYGEHDTSIKGAMKRGDYYMTKEIVQKGWEFTINELKASGLRGRGGAGF 100
Query: 117 PSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
P+GLK+SFMPK DGRPSYLVVNADESEP TCKDREI+RH+PHKL++GCL+ G M A A
Sbjct: 101 PTGLKYSFMPKKKDGRPSYLVVNADESEPCTCKDREILRHEPHKLVDGCLVVGAAMLAKA 160
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGEY +E LE+A EAYA G LGKNACGSGYDFDV++H G GAYICGEETA++
Sbjct: 161 AYIYIRGEYYDEYVALEKAIAEAYAEGKLGKNACGSGYDFDVYVHRGGGAYICGEETAMI 220
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGKQGKPRLKPPFPAN GL+GCPTTVTNVETVAV PTI+RRG WFASFGR+ N GT
Sbjct: 221 ESLEGKQGKPRLKPPFPANVGLWGCPTTVTNVETVAVVPTIMRRGGSWFASFGREGNKGT 280
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF V G+VN PCTVEEEM +P++ LI++H GVRGGWDNL AVIPGG SVP++ K +
Sbjct: 281 KLFNVGGNVNNPCTVEEEMGVPMRYLIEKHGKGVRGGWDNLQAVIPGGVSVPMITKSMAA 340
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ +MD+D L+ +S LGT ++ V+D S D++ A+AR+S F+KHESCGQCTPCREG W++
Sbjct: 341 EAIMDFDGLRKYKSALGTGSMTVLDNSQDIIKAVARISSFFKHESCGQCTPCREGCMWMY 400
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
I++R +GNA + EIDML E+++QIEGHTICALGDAAAWPVQGLIR+FRP +E RI ++
Sbjct: 401 NILQRFTIGNASIGEIDMLDEISRQIEGHTICALGDAAAWPVQGLIRNFRPLIEERINQY 460
>gi|329114683|ref|ZP_08243442.1| NADH-quinone oxidoreductase chain 1 [Acetobacter pomorum DM001]
gi|326696163|gb|EGE47845.1| NADH-quinone oxidoreductase chain 1 [Acetobacter pomorum DM001]
Length = 442
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 293/419 (69%), Positives = 351/419 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG D L A KRGDW T ++ KG D ++ E+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGQDDWRLPAARKRGDWDNTAAIIAKGRDAVIAEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLV+N DESEPGTCKDRE+MRH+PHKL+E +IA M A A+
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVINGDESEPGTCKDREVMRHEPHKLIESAMIASFAMGAHAS 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ E + L+ A EAY AGLLGKNA G+G+DFD IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFCREAERLQAAIDEAYEAGLLGKNAAGTGWDFDFRIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA AGLYGCPTTV NVE++AV+ TI+RRG WF+ GR NN+GTK
Sbjct: 182 SLEGKKGQPRMKPPFPAGAGLYGCPTTVNNVESIAVTSTIMRRGAAWFSGLGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ + LKE+I++H GGVRGGWDNLLAVIPGG SVP+LPK IC+
Sbjct: 242 LMAISGHVNTPCVFEEELGVSLKEIIEKHGGGVRGGWDNLLAVIPGGCSVPVLPKSICET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A +SGLGTA +IVMDKSTD+++AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAERSGLGTACMIVMDKSTDIIEAIARFSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M R+ G A++EEID+L++VTKQ+EGHTICALGDAAAWP+QGLIRHFRPE+E RI+++
Sbjct: 362 MMNRMVQGKAEIEEIDLLEQVTKQVEGHTICALGDAAAWPIQGLIRHFRPEMEARIRQY 420
>gi|298291842|ref|YP_003693781.1| NADH-quinone oxidoreductase subunit F [Starkeya novella DSM 506]
gi|296928353|gb|ADH89162.1| NADH-quinone oxidoreductase, F subunit [Starkeya novella DSM 506]
Length = 435
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 296/420 (70%), Positives = 353/420 (84%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG HD L GA KRG W TK L+ G D+I+ +K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGHHDWGLDGARKRGSWDGTKLLLDAGRDFIIEHMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +DGRP YLVVNADESEPGTCKDREI+RHDPH L+EGCLIAG M A AA
Sbjct: 62 TGLKWSFMPKNNDGRPHYLVVNADESEPGTCKDREILRHDPHHLVEGCLIAGFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER++L+ A +AY AGL+GKN G+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIVEREHLQAAVDQAYEAGLIGKNNV-HGWDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFAGIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE M IP KELI++H GGVRGGWDNLLA+IPGG+S P++P CDD
Sbjct: 241 LFGISGHVNTPCIVEEAMGIPFKELIEKHGGGVRGGWDNLLAIIPGGASCPIIPADQCDD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
++MD+D +AV+S GTA V+VMDK+TDVV AIAR+SYF++HESCGQCTPCREGTGW+W
Sbjct: 301 LIMDFDGCRAVKSSFGTAGVLVMDKTTDVVKAIARISYFFRHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+++R+ G A+ EID+L +VT Q+EGHTICALGDAAAWPVQGLIRHFR E+ERRI ++A
Sbjct: 361 VLDRMVAGRAQKREIDLLLQVTTQVEGHTICALGDAAAWPVQGLIRHFRGEIERRIDQYA 420
>gi|126461948|ref|YP_001043062.1| NADH dehydrogenase I subunit F [Rhodobacter sphaeroides ATCC 17029]
gi|221638932|ref|YP_002525194.1| NADH dehydrogenase I subunit F [Rhodobacter sphaeroides KD131]
gi|332557949|ref|ZP_08412271.1| NADH dehydrogenase I subunit F [Rhodobacter sphaeroides WS8N]
gi|429208411|ref|ZP_19199663.1| NADH-ubiquinone oxidoreductase chain F [Rhodobacter sp. AKP1]
gi|126103612|gb|ABN76290.1| NADH-quinone oxidoreductase, F subunit [Rhodobacter sphaeroides
ATCC 17029]
gi|221159713|gb|ACM00693.1| NADH-quinone oxidoreductase, F subunit [Rhodobacter sphaeroides
KD131]
gi|332275661|gb|EGJ20976.1| NADH dehydrogenase I subunit F [Rhodobacter sphaeroides WS8N]
gi|428188666|gb|EKX57226.1| NADH-ubiquinone oxidoreductase chain F [Rhodobacter sp. AKP1]
Length = 431
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/417 (70%), Positives = 348/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGM D LKGAM RG W T DL+ G D I++ VK SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMQDRSLKGAMARGQWDGTADLLALGRDKIIDIVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEP TCKDREIMRHDPH L+EG L+AG M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPAYLVINADESEPATCKDREIMRHDPHTLVEGALLAGFAMGAVAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E++ L+ A EAY AGL+G+NA SGYDFDV++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYVREKEALQAAIDEAYDAGLIGRNAAKSGYDFDVYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA +GLYGCPTTV NVE++AV P ILRRG +WFASFGR NN+G K
Sbjct: 182 SLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVIPAILRRGGEWFASFGRPNNAGVK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC +EE MSI +KELI++H GGVRGGW NL AVIPGG+S P++P C+D
Sbjct: 242 LFAMSGHVNTPCVIEESMSISMKELIEKHGGGVRGGWKNLKAVIPGGASCPIIPAEQCED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD ++ ++S GTA +IVMD+ TDV+ A+ RL+ F+KHESCGQCTPCREGTGW+
Sbjct: 302 AVMDYDGMRELKSSFGTACMIVMDQQTDVIKAVWRLAKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRH+R E+E RIK
Sbjct: 362 VMDRLVRGEAEVEEIDMLLSVTKQVEGHTICALGDAAAWPIQGLIRHYREEIEDRIK 418
>gi|77463076|ref|YP_352580.1| NADH dehydrogenase I subunit F [Rhodobacter sphaeroides 2.4.1]
gi|77387494|gb|ABA78679.1| NADH dehydrogenase-ubiquinone oxidoreductase, chain F [Rhodobacter
sphaeroides 2.4.1]
Length = 431
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/417 (70%), Positives = 348/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGM D LKGAM RG W T DL+ G D I++ VK SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMQDRSLKGAMARGQWDGTADLLALGRDKIIDIVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEP TCKDREIMRHDPH L+EG L+AG M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPAYLVINADESEPATCKDREIMRHDPHTLVEGALLAGFAMGAVAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E++ L+ A EAY AGL+G+NA SGYDFDV++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYVREKEALQAAIDEAYDAGLIGQNAAKSGYDFDVYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA +GLYGCPTTV NVE++AV P ILRRG +WFASFGR NN+G K
Sbjct: 182 SLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVIPAILRRGGEWFASFGRPNNAGVK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC +EE MSI +KELI++H GGVRGGW NL AVIPGG+S P++P C+D
Sbjct: 242 LFAMSGHVNTPCVIEESMSISMKELIEKHGGGVRGGWKNLKAVIPGGASCPIIPAEQCED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD ++ ++S GTA +IVMD+ TDV+ A+ RL+ F+KHESCGQCTPCREGTGW+
Sbjct: 302 AVMDYDGMRELKSSFGTACMIVMDQQTDVIKAVWRLAKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRH+R E+E RIK
Sbjct: 362 VMDRLVRGEAEVEEIDMLLSVTKQVEGHTICALGDAAAWPIQGLIRHYREEIEDRIK 418
>gi|16126190|ref|NP_420754.1| NADH dehydrogenase I subunit F [Caulobacter crescentus CB15]
gi|221234961|ref|YP_002517397.1| NADH dehydrogenase I subunit F [Caulobacter crescentus NA1000]
gi|13423406|gb|AAK23922.1| NADH dehydrogenase I, F subunit [Caulobacter crescentus CB15]
gi|220964133|gb|ACL95489.1| NADH-quinone oxidoreductase chain F [Caulobacter crescentus NA1000]
Length = 439
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 304/422 (72%), Positives = 353/422 (83%), Gaps = 2/422 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG+HD L+GA KRG W+ TKD++ G DWI+ +K SGLRGRGGAG
Sbjct: 3 GILEDKDRIFTNLYGLHDWGLEGAKKRGCWNGTKDILDAGRDWIIENMKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
F +GLKWSFMPK V DGRP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 63 FSTGLKWSFMPKEVKDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASRAMLA 122
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
A YIYIRGEYV ER+ LE A ++AY A L+GKN G+DFD+++H+GAGAYICGEETA
Sbjct: 123 HACYIYIRGEYVFERERLEAAIKQAYEAKLVGKNNV-HGWDFDIYVHHGAGAYICGEETA 181
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGK+G+PRLKPPFPA AGLYG PTTV NVE++AV+ TILRRG WFA FGR NN+
Sbjct: 182 LLESLEGKKGQPRLKPPFPAGAGLYGMPTTVNNVESIAVAGTILRRGAAWFAGFGRPNNA 241
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFCVSGHVN PC VEE MSIP ++L++ HCGG+RGGW NL AVIPGGSSVP++P
Sbjct: 242 GTKLFCVSGHVNLPCNVEEAMSIPFRQLVEDHCGGIRGGWGNLKAVIPGGSSVPMIPAEQ 301
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C+D+ MD+DAL+ ++SGLGTAAVIVMDK TD+V AIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 302 CEDLPMDFDALRNLKSGLGTAAVIVMDKDTDLVRAIARLSYFYKHESCGQCTPCREGTGW 361
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+W +MER+ G A +EID L +VT Q+EGHTICALGDAAAWP+QGL RHFR E+E RI
Sbjct: 362 MWRVMERMVTGEADPKEIDTLLDVTTQVEGHTICALGDAAAWPIQGLFRHFRHEVEERIA 421
Query: 475 EH 476
+
Sbjct: 422 SY 423
>gi|158423296|ref|YP_001524588.1| NADH dehydrogenase I subunit F [Azorhizobium caulinodans ORS 571]
gi|158330185|dbj|BAF87670.1| NADH-quinone oxidoreductase F subunit protein [Azorhizobium
caulinodans ORS 571]
Length = 433
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/420 (70%), Positives = 352/420 (83%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG D LKGA+KRG+W TK ++ KG DWI+NE+K SGLRGRGGAGF
Sbjct: 2 LQDKDRIFTNIYGYEDSGLKGALKRGNWDGTKGILEKGRDWIINEMKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDREIMR+DPH L+EGCLIA M A AA
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDREIMRNDPHTLIEGCLIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEYV ER+ LE A EAY AGL+GKN GY FD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYVRERERLEAAIDEAYDAGLIGKNNI-HGYPFDLYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAPEILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF + GHVN PC VE+ MSI +EL+++H GG+RGGWDNLLA+IPGG+S P++P C+D
Sbjct: 241 LFGILGHVNTPCVVEDAMSITFRELVEKHGGGIRGGWDNLLAIIPGGASCPVVPAAACED 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+++D+D L+AV+S GTA V+VMDKSTD+V AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 LILDFDGLRAVKSSFGTAGVLVMDKSTDIVRAIARISYFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ R+ G A+ EID L EVT QIEGHTICALGDAAAWPVQGLIR+FR E+E+RI ++A
Sbjct: 361 VLNRMAEGRAQKREIDQLLEVTTQIEGHTICALGDAAAWPVQGLIRNFRHEIEKRIDQYA 420
>gi|148259937|ref|YP_001234064.1| NADH dehydrogenase I subunit F [Acidiphilium cryptum JF-5]
gi|326403109|ref|YP_004283190.1| NADH-quinone oxidoreductase subunit F [Acidiphilium multivorum
AIU301]
gi|338981057|ref|ZP_08632293.1| NADH dehydrogenase [ubiquinone] flavoprotein 1 [Acidiphilium sp.
PM]
gi|146401618|gb|ABQ30145.1| NADH dehydrogenase subunit F [Acidiphilium cryptum JF-5]
gi|325049970|dbj|BAJ80308.1| NADH-quinone oxidoreductase subunit F [Acidiphilium multivorum
AIU301]
gi|338208023|gb|EGO95922.1| NADH dehydrogenase [ubiquinone] flavoprotein 1 [Acidiphilium sp.
PM]
Length = 431
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 292/422 (69%), Positives = 355/422 (84%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRI+TNLYG+HD L GA RGDW TKD++ +G D I+ E+K SGLRGRGGAGFP
Sbjct: 2 LSDRDRIYTNLYGLHDWRLAGARARGDWDGTKDILARGRDAIIEEIKSSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRPSYLV+NADESEPGTCKDR+I+RH+PHKL+EG LIAG M A A
Sbjct: 62 TGMKWSFMPKETDGRPSYLVINADESEPGTCKDRDILRHEPHKLVEGALIAGFAMGAHRA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY NE KNL+ A EA AGLLG +ACGSG+ FD+ +H GAGAYICGEE+AL+E
Sbjct: 122 FIYVRGEYYNEYKNLQAAVDEAREAGLLGDDACGSGWAFDITVHRGAGAYICGEESALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GLYGCPTTV NVET+A TI+RRG WF++ GR NSGTK
Sbjct: 182 SIEGKKGLPRMKPPFPAALGLYGCPTTVNNVETIAGVATIMRRGAAWFSALGRPKNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN+PC VEEE+ IPL+ELI++H GGVRGGWDNL AVIPGGSSV ++PK +CD
Sbjct: 242 IFCISGHVNRPCNVEEELGIPLRELIEKHAGGVRGGWDNLQAVIPGGSSVHMIPKSVCDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+ ++GLGTAAVIVMDKSTD++ AIARL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLREQRTGLGTAAVIVMDKSTDLIRAIARLAAFYKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL G A++ +ID+L++VTKQ+EGHTIC LGDAAAWP+QGL+RHFRP +E+RI ++
Sbjct: 362 MMYRLVEGRAEIADIDLLEQVTKQVEGHTICPLGDAAAWPIQGLLRHFRPVVEQRIADYK 421
Query: 478 ER 479
R
Sbjct: 422 AR 423
>gi|315499794|ref|YP_004088597.1| NADH-quinone oxidoreductase, f subunit [Asticcacaulis excentricus
CB 48]
gi|315417806|gb|ADU14446.1| NADH-quinone oxidoreductase, F subunit [Asticcacaulis excentricus
CB 48]
Length = 437
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 299/418 (71%), Positives = 351/418 (83%), Gaps = 1/418 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG HD L+GA +RG W+ T+D++ G DWI+ VK SGLRGRGGAG
Sbjct: 3 GILEDKDRIFTNLYGFHDWGLEGAKQRGCWNATRDILSYGRDWIITNVKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
F +GLKWSFMPK RP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M+A
Sbjct: 63 FSTGLKWSFMPKEVKDRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASFAMQAH 122
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A YIYIRGEYV ER+ LE A ++AY A L+GKN G+DFD+++H+G GAYICGEETAL
Sbjct: 123 ACYIYIRGEYVFERERLEAAIKQAYEAKLVGKNNV-HGWDFDIYVHHGGGAYICGEETAL 181
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
LESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV TILRRG WFA FG +NN+G
Sbjct: 182 LESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVGTILRRGAAWFAGFGAQNNTG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKLFC+SGHV +PC VEE MSIP ++LI+ HCGG+RGGW NL AVIPGGSSVP++P C
Sbjct: 242 TKLFCISGHVERPCNVEEAMSIPFRQLIEDHCGGIRGGWGNLKAVIPGGSSVPMIPAEQC 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
+++ MD+D L+ + SGLGTAAVIVMDKSTD++ AIARLSYFYKHESCGQCTPCREGTGW+
Sbjct: 302 ENMPMDFDTLRGLGSGLGTAAVIVMDKSTDLIKAIARLSYFYKHESCGQCTPCREGTGWM 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
W +MER+ G+A +EID+L +VTKQ+EGHTICALGDAAAWPVQGLIRHFR E+E RI
Sbjct: 362 WRVMERMAKGDADPKEIDILLDVTKQVEGHTICALGDAAAWPVQGLIRHFRHEIEDRI 419
>gi|295689621|ref|YP_003593314.1| NADH-quinone oxidoreductase subunit F [Caulobacter segnis ATCC
21756]
gi|295431524|gb|ADG10696.1| NADH-quinone oxidoreductase, F subunit [Caulobacter segnis ATCC
21756]
Length = 439
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 304/422 (72%), Positives = 355/422 (84%), Gaps = 2/422 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG+ D L+GA KRG W+ TKD++ G DWI++ +K SGLRGRGGAG
Sbjct: 3 GILEDKDRIFTNLYGLQDWGLEGAKKRGCWNGTKDILDAGRDWIIDNMKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
F +GLKWSFMPK V +GRP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 63 FSTGLKWSFMPKEVKEGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASRAMLA 122
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+A YIYIRGEYV ER+ LE A ++AY A L+GKN G+DFD+++H+GAGAYICGEETA
Sbjct: 123 NACYIYIRGEYVFERERLEAAIKQAYEAKLIGKNNV-HGWDFDLYVHHGAGAYICGEETA 181
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGK+G+PRLKPPFPA AGLYG PTTV NVE++AV+ TILRRG WFA FGR NN+
Sbjct: 182 LLESLEGKKGQPRLKPPFPAGAGLYGMPTTVNNVESIAVAGTILRRGAAWFAGFGRPNNA 241
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFCVSGHVN PC VEE MSIP ++LI+ HCGG+RGGW NL AVIPGGSSVP++P
Sbjct: 242 GTKLFCVSGHVNLPCNVEEAMSIPFRQLIEDHCGGIRGGWGNLKAVIPGGSSVPMIPAEQ 301
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C+D+ MD+DAL+ ++SGLGTAAVIVMDKSTD+V AIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 302 CEDLPMDFDALRNLRSGLGTAAVIVMDKSTDLVRAIARLSYFYKHESCGQCTPCREGTGW 361
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+W +MER+ G A +EID L +VT Q+EGHTICALGDAAAWP+QGL RHFR E+E RI
Sbjct: 362 MWRVMERMATGEADPKEIDTLLDVTTQVEGHTICALGDAAAWPIQGLFRHFRHEVEERIA 421
Query: 475 EH 476
+
Sbjct: 422 SY 423
>gi|148255908|ref|YP_001240493.1| NADH dehydrogenase I subunit F [Bradyrhizobium sp. BTAi1]
gi|146408081|gb|ABQ36587.1| NADH dehydrogenase subunit F [Bradyrhizobium sp. BTAi1]
Length = 441
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 299/423 (70%), Positives = 352/423 (83%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG+HD L+GA +RG W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFTNLYGLHDWGLEGARRRGSWDGTKGLIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHHLVEGCLLASFAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+ A +AY A L+GKN G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIRERERLQAAIDQAYEANLIGKNNI-HGWPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGASWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQIEGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQIEGHTICALGDAAAWPIQGLITHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|312116350|ref|YP_004013946.1| NADH-quinone oxidoreductase subunit F [Rhodomicrobium vannielii
ATCC 17100]
gi|311221479|gb|ADP72847.1| NADH-quinone oxidoreductase, F subunit [Rhodomicrobium vannielii
ATCC 17100]
Length = 430
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/416 (70%), Positives = 350/416 (84%), Gaps = 1/416 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG HD LKGA +RG W TK ++ KG DWI+ E+K SGLRGRGGAGF
Sbjct: 2 LSDKDRIFKNLYGQHDWGLKGARERGAWDNTKAILEKGQDWIIEEMKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EG LI MRA+
Sbjct: 62 TGMKWSFMPKKSDGRPHYLVVNADESEPGTCKDREIIRHDPHLLIEGSLIGAFAMRANVV 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A +AY A L+GK+ +G+D D+++H+GAGAYICGEETA LE
Sbjct: 122 YIYIRGEFIRERQRLQAAIDQAYEARLIGKDNI-NGWDCDIYVHHGAGAYICGEETAQLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PRLKPPFPANAGL+G PTTV NVE++AV P ILRRG WFA+ G+ NN+GTK
Sbjct: 181 SIEGKKGQPRLKPPFPANAGLWGAPTTVNNVESIAVVPDILRRGAAWFAALGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHV +PC VEEEM I +EL+D+H GGVRGGWDNLLA+IPGGSSVP +P H+C+D
Sbjct: 241 LFCISGHVERPCNVEEEMGISFRELVDKHAGGVRGGWDNLLAIIPGGSSVPCVPAHMCND 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L+ V SGLGTAAVIVMDKSTD+V AI+RLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 LGMDFDSLRKVGSGLGTAAVIVMDKSTDIVKAISRLSYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+MER+ G A+ EIDML +V+KQIEGHTICALGDAAAWPVQGLIRHFR E+E RI
Sbjct: 361 VMERMVEGRAEHAEIDMLWDVSKQIEGHTICALGDAAAWPVQGLIRHFRHEMEARI 416
>gi|365890990|ref|ZP_09429466.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. STM 3809]
gi|365333106|emb|CCE01997.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. STM 3809]
Length = 441
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 299/423 (70%), Positives = 351/423 (82%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+HD L+GA +RG W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFTNLYGLHDWGLEGARRRGSWDGTKGLIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHHLVEGCLLASFAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+ A +AY A L+GKN G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIRERERLQAAIDQAYEANLIGKNNI-HGWPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGASWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQIEGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQIEGHTICALGDAAAWPIQGLITHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|365879270|ref|ZP_09418702.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. ORS 375]
gi|365292795|emb|CCD91233.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. ORS 375]
Length = 441
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 299/423 (70%), Positives = 351/423 (82%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+HD L+GA +RG W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFTNLYGLHDWGLEGARRRGSWDGTKGLIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHHLVEGCLLASFAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+ A +AY A L+GKN G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIRERERLQAAIDQAYEANLIGKNNI-HGWPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGASWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQIEGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQIEGHTICALGDAAAWPIQGLITHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|349685712|ref|ZP_08896854.1| NADH dehydrogenase I subunit F [Gluconacetobacter oboediens 174Bp2]
Length = 441
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/419 (70%), Positives = 350/419 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG +D L GA RG W+ T D++ +G D I+ E+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNLYGQNDWRLAGARARGGWNGTADILARGPDAIIAEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLV+N DESEPGTCKDREI+RHDPHKL+E LIA M A AA
Sbjct: 62 TGVKWSFMPKKNDGRPHYLVINGDESEPGTCKDREILRHDPHKLVESALIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE +L+ A EAY AGL+GKNACGSG+DFD +IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFYNEAMHLQHAIDEAYEAGLIGKNACGSGWDFDFYIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA GLYGCPTTV NVE++AVS TILRRG WF+ GR NN+GTK
Sbjct: 182 SLEGKKGQPRMKPPFPAAMGLYGCPTTVNNVESIAVSATILRRGAAWFSGLGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +P+K+LI++H GGVRGGWDNLLAVIPGG SVP+LP+ +CD
Sbjct: 242 LMAISGHVNTPCVFEEELGVPMKDLIEKHGGGVRGGWDNLLAVIPGGCSVPMLPRDVCDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A SGLGT +IVMDKSTD++ AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAEGSGLGTGCMIVMDKSTDIIAAIARFSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IMER+ G A++EEIDML++VT+Q+EGHTICALGDAAAWP+QGLIR FRP +E RI +
Sbjct: 362 IMERMVEGRAEIEEIDMLEQVTRQVEGHTICALGDAAAWPIQGLIRRFRPVMEERIHAY 420
>gi|326473915|gb|EGD97924.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Trichophyton
tonsurans CBS 112818]
gi|326480914|gb|EGE04924.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Trichophyton equinum
CBS 127.97]
Length = 511
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/424 (71%), Positives = 345/424 (81%), Gaps = 21/424 (4%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG H P LK AMK GDW++TK+++LKG DW K
Sbjct: 82 YGGLKDQDRIFQNLYGRHPPDLKHAMKCGDWYKTKEIILKGHDWSFMNFKD--------- 132
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
W D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL++G M A
Sbjct: 133 -------WD-----KDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVSGRAMNA 180
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+AAYIYIRGE+ E L++A EAYAAGL+GKNACGSGYDFDV+IH G GAYICGEETA
Sbjct: 181 TAAYIYIRGEFYEEATVLQKAINEAYAAGLIGKNACGSGYDFDVYIHRGMGAYICGEETA 240
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+PTI RRG WFA FGR+ N
Sbjct: 241 LIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAPTICRRGGKWFAGFGRERNQ 300
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFC+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWDNLLAVIPGGSS P+LPKHI
Sbjct: 301 GTKLFCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWDNLLAVIPGGSSTPVLPKHI 360
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDD +MD+DALK QSGLGTAAVIVMDKSTD+V AI+RLS FY+HESCGQCTPCREG+ W
Sbjct: 361 CDDQMMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSAFYRHESCGQCTPCREGSKW 420
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+MER + G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RI+
Sbjct: 421 TLQMMERFERGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIR 480
Query: 475 EHAE 478
++A+
Sbjct: 481 QNAQ 484
>gi|418296082|ref|ZP_12907926.1| NADH dehydrogenase I subunit F [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539514|gb|EHH08752.1| NADH dehydrogenase I subunit F [Agrobacterium tumefaciens
CCNWGS0286]
Length = 434
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 293/424 (69%), Positives = 351/424 (82%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYG+ D LKG M RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGLKDKSLKGVMARGHWDGTKQIIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+R+DPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN +G+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYDAGLLGKNN-KNGWDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHV +PCT E+ + + +ELI+ HCGG+RGGWDNLL VIPGG+S P++ D
Sbjct: 241 LFMVSGHVERPCTFEDALGLSFRELIEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V+S GT +IVMDKSTDV+ AIAR++ F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AIMDFDGMREVKSSFGTGGMIVMDKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ GNA+ EIDML EVTKQIEGHTICALGDAAAWPVQ LIR+FRPE+E+RI ++
Sbjct: 361 VLERMVKGNAQKREIDMLFEVTKQIEGHTICALGDAAAWPVQALIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
R +
Sbjct: 421 YRAM 424
>gi|339320296|ref|YP_004679991.1| NADH dehydrogenase I subunit F [Candidatus Midichloria mitochondrii
IricVA]
gi|338226421|gb|AEI89305.1| NADH dehydrogenase I subunit F [Candidatus Midichloria mitochondrii
IricVA]
Length = 434
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/419 (72%), Positives = 351/419 (83%), Gaps = 2/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD DRIF+NLYG LK + +RGDW T + G D ++ E+KKSGLRGRGGAGF
Sbjct: 2 LKDSDRIFSNLYGQDSADLKSSKERGDWDETIKFLKLGPDVVIEEIKKSGLRGRGGAGFL 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G KWSFMPK ++ PSYLVVNADE EPGTCKDR+I+RH+PHK++EGCLIAG +RA A
Sbjct: 62 TGAKWSFMPKNPTEENPSYLVVNADEGEPGTCKDRDIIRHEPHKIIEGCLIAGHAIRAEA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
+YIYIRGE+ NE L++A EAY AGL+GKNACGSG +FD+++H GAGAYICGEETALL
Sbjct: 122 SYIYIRGEFYNEAIALQKAIDEAYEAGLIGKNACGSGKNFDIYLHRGAGAYICGEETALL 181
Query: 237 ESLEGKQGKPRLKPP-FPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
SLEG++G PRLKPP FPA GL+G PTTV NVET+AV P I+RR DWF S G+ NNSG
Sbjct: 182 NSLEGRKGMPRLKPPAFPAAVGLFGHPTTVNNVETIAVVPAIMRRTADWFLSLGKPNNSG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TK+FC+SGHVNKPC VE EMSIPLKELI+++ GGVRGGWDNLLA+IPGGSSVP+LPK IC
Sbjct: 242 TKVFCISGHVNKPCNVEAEMSIPLKELIEKYAGGVRGGWDNLLAIIPGGSSVPMLPKKIC 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
DDVLMD+D+L+AVQSGLGTA VIVMDKSTD+++AIARLS FY HESCGQCTPCREGTGW+
Sbjct: 302 DDVLMDFDSLRAVQSGLGTAGVIVMDKSTDLIEAIARLSKFYMHESCGQCTPCREGTGWI 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM RL GNA EEID L E+TKQIEGHTICALG+AAAWPVQGLIRHFR E+E RIK
Sbjct: 362 YRIMSRLVKGNAHSEEIDKLFEITKQIEGHTICALGEAAAWPVQGLIRHFRNEIENRIK 420
>gi|327295324|ref|XP_003232357.1| NADH-ubiquinone oxidoreductase subunit [Trichophyton rubrum CBS
118892]
gi|326465529|gb|EGD90982.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Trichophyton rubrum
CBS 118892]
Length = 511
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/424 (71%), Positives = 345/424 (81%), Gaps = 21/424 (4%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG H P LK AMK GDW++TK+++LKG DW K
Sbjct: 82 YGGLKDQDRIFQNLYGRHPPDLKHAMKCGDWYKTKEIILKGHDWSFMNFKD--------- 132
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
W D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL++G M A
Sbjct: 133 -------WD-----KDTKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVSGRAMNA 180
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+AAYIYIRGE+ E L++A EAYAAGL+GKNACGSGYDFDV+IH G GAYICGEETA
Sbjct: 181 TAAYIYIRGEFYEEATVLQKAINEAYAAGLIGKNACGSGYDFDVYIHRGMGAYICGEETA 240
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+PTI RRG WFA FGR+ N
Sbjct: 241 LIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAPTICRRGGKWFAGFGRERNQ 300
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFC+SGHVN PCTVEEEMSIPL+ELIDRHCGGVRGGWDNLLAVIPGGSS P+LPKHI
Sbjct: 301 GTKLFCISGHVNNPCTVEEEMSIPLRELIDRHCGGVRGGWDNLLAVIPGGSSTPVLPKHI 360
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDD +MD+DALK QSGLGTAAVIVMDKSTD+V AI+RLS FY+HESCGQCTPCREG+ W
Sbjct: 361 CDDQMMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSAFYRHESCGQCTPCREGSKW 420
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+MER + G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RI+
Sbjct: 421 TLQMMERFERGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIR 480
Query: 475 EHAE 478
++A+
Sbjct: 481 QNAQ 484
>gi|256072407|ref|XP_002572527.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni]
gi|353233576|emb|CCD80930.1| putative nadh-ubiquinone oxidoreductase flavoprotein 1 (ndufv1)
[Schistosoma mansoni]
Length = 413
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 297/397 (74%), Positives = 341/397 (85%)
Query: 80 MKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 139
M+RG W++TK++VLKG+DWI+ E+KKSGLRGRGGAGFPSG+KWSFM K SDGRP YLV+N
Sbjct: 1 MQRGHWYKTKEIVLKGSDWIIEEIKKSGLRGRGGAGFPSGMKWSFMNKPSDGRPKYLVIN 60
Query: 140 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEA 199
ADE EPGTCKDREIMRHDPH L+EGCLIAG M A+AAYIYIRGE+ NE N++ A +EA
Sbjct: 61 ADEGEPGTCKDREIMRHDPHTLIEGCLIAGKAMGANAAYIYIRGEFYNEASNMQLAIKEA 120
Query: 200 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 259
Y AG LGKNACG+G++FDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ GL+
Sbjct: 121 YEAGFLGKNACGTGFNFDVYMHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADIGLF 180
Query: 260 GCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 319
GCPTTVTNVETVAVSPTI RRG DWFASFGR+ N GTKLF +SGHVN PCTVEEEMSIP+
Sbjct: 181 GCPTTVTNVETVAVSPTICRRGGDWFASFGRERNRGTKLFNISGHVNNPCTVEEEMSIPM 240
Query: 320 KELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 379
++LI+RH GGV GGWDNLLAVIPGGSS PLLPK IC VLMD+DAL SGLGTAA+IV
Sbjct: 241 RDLIERHAGGVIGGWDNLLAVIPGGSSTPLLPKDICSTVLMDFDALVQANSGLGTAALIV 300
Query: 380 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 439
M++S DVV+ I+RL FY+HESCGQCTPCREG WL IM R GNA +EIDM+ E++
Sbjct: 301 MNRSADVVNCISRLIKFYEHESCGQCTPCREGCRWLSQIMTRFVKGNANKDEIDMIWEIS 360
Query: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
KQ+EG TICAL D AAWPVQGLIRHFRPELE R ++
Sbjct: 361 KQMEGRTICALADGAAWPVQGLIRHFRPELEARFAKY 397
>gi|302383053|ref|YP_003818876.1| NADH-quinone oxidoreductase subunit F [Brevundimonas subvibrioides
ATCC 15264]
gi|302193681|gb|ADL01253.1| NADH-quinone oxidoreductase, F subunit [Brevundimonas subvibrioides
ATCC 15264]
Length = 437
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 300/424 (70%), Positives = 353/424 (83%), Gaps = 1/424 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG+ D L+GA RG W+ TKD++ G DW++ VK SGLRGRGGAG
Sbjct: 3 GLLEDKDRIFTNLYGLQDWGLEGAKNRGCWNATKDMLDMGRDWLITNVKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
F +GLKWSFMPK RP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M+A
Sbjct: 63 FSTGLKWSFMPKEVKDRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASFAMQAH 122
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A YIY+RGEYV ER+ +E A ++AY A L+GKN G+DFDV+IH+GAGAYICGEETAL
Sbjct: 123 ACYIYLRGEYVLERERMEAAVKQAYEARLIGKNNI-HGWDFDVYIHHGAGAYICGEETAL 181
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
LESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV TILRRG +WFA FGR NN+G
Sbjct: 182 LESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVGTILRRGAEWFAGFGRPNNTG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKL +SGHVN+PC VEE MSIPL++LI+ HCGGVRGGWDNL A+IPGG SVPL+ + +
Sbjct: 242 TKLMSISGHVNRPCNVEEAMSIPLRQLIEDHCGGVRGGWDNLKAIIPGGVSVPLITREMS 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
+ LMD+D+L+ ++SGLGTAAV+VMD STD+V AIAR+SYFYKHESCGQCTPCREGTGW+
Sbjct: 302 EVALMDFDSLREMKSGLGTAAVVVMDNSTDLVKAIARISYFYKHESCGQCTPCREGTGWM 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
W ++ER+ VG A EIDML EV+ QIEGHTICALGDAAAWPVQGLIRHFR E+E RI +
Sbjct: 362 WRVLERMAVGEADPGEIDMLLEVSTQIEGHTICALGDAAAWPVQGLIRHFRHEIEDRISQ 421
Query: 476 HAER 479
+ R
Sbjct: 422 YRTR 425
>gi|417860272|ref|ZP_12505328.1| NADH dehydrogenase I subunit F [Agrobacterium tumefaciens F2]
gi|338823336|gb|EGP57304.1| NADH dehydrogenase I subunit F [Agrobacterium tumefaciens F2]
Length = 434
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 292/424 (68%), Positives = 351/424 (82%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYG+ D LKG RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGLKDKSLKGVRARGHWDGTKQIIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +DGRP YLVVNADESEPGTCKDREI+R+DPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKENDGRPHYLVVNADESEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN +G+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYDAGLLGKNN-KNGWDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHV +PCT E+ + + +ELI+RHCGG+RGGWDNLL VIPGG+S P++ D
Sbjct: 241 LFMVSGHVERPCTFEDALGLSFRELIERHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V+S GT +IVMDKSTDV+ AIAR++ F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AIMDFDGMREVKSSFGTGGMIVMDKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ GNA+ EIDML EVTKQIEGHTICALGDAAAWPVQ LIR+FRPE+E+RI ++
Sbjct: 361 VLERMVKGNAQKREIDMLFEVTKQIEGHTICALGDAAAWPVQALIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
R +
Sbjct: 421 YRAM 424
>gi|393766075|ref|ZP_10354632.1| NADH dehydrogenase I subunit F [Methylobacterium sp. GXF4]
gi|392728448|gb|EIZ85756.1| NADH dehydrogenase I subunit F [Methylobacterium sp. GXF4]
Length = 433
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 297/419 (70%), Positives = 347/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+H P L+ A +RG W TK L+ +G DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LSDQDRIFTNLYGLHSPGLEAAKQRGAWDGTKFLLEQGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREIMRHDPH L+EGC++A M A A
Sbjct: 62 TGLKWSFMPKKSDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCMLACFAMGAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEYV E+ L++A EAY A L+G++ Y FD+++H+GAGAYICGEETAL+E
Sbjct: 122 YIYIRGEYVAEKHALQKAVDEAYEARLVGQSNV-HDYPFDIYVHHGAGAYICGEETALIE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+ TILRRG WFA G KNN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAGTILRRGGAWFAGLGGKNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVNKPC VE E+ I +EL+DRHCGG+RGGWDNLL IPGGSSVPL+P D
Sbjct: 241 LFCVSGHVNKPCNVEAELGITFRELVDRHCGGMRGGWDNLLCSIPGGSSVPLVPAEQIID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ + SGLGTAAVIV+D+STD+V AI R+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 AKMDFDTLRNLGSGLGTAAVIVLDRSTDIVAAITRISYFYKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+R+ G A+ EIDML EVTKQIEGHTICALGDAAAWP+QGLI+HFRPE+E+RI +
Sbjct: 361 VMQRMTEGRAQKREIDMLFEVTKQIEGHTICALGDAAAWPIQGLIKHFRPEIEKRIDRY 419
>gi|414162406|ref|ZP_11418653.1| NADH-quinone oxidoreductase chain 1 [Afipia felis ATCC 53690]
gi|410880186|gb|EKS28026.1| NADH-quinone oxidoreductase chain 1 [Afipia felis ATCC 53690]
Length = 441
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 297/427 (69%), Positives = 354/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+ D L+GA +RG W TK ++ KG DWIV+E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFKNLYGLQDWGLEGARRRGAWDGTKAIIDKGRDWIVSEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGMKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLVEGCLLASFAMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE++ ER+NL+ A +AY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 AYIYIRGEFIRERENLQAAVDQAYEAKLIGKDNV-HGWPFDLYVTHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA+ GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAAIGRANNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+ +SGHVN PC VEE MSIP +ELID+H GG+RGGWDNLLA+IPGG+S PL+P C+
Sbjct: 241 KLYGISGHVNTPCVVEEAMSIPFRELIDKHGGGIRGGWDNLLAIIPGGASCPLIPAADCE 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D++MD+D +AV+S GTA VIVMDKSTDV+ AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 DLIMDFDGTRAVKSSFGTAGVIVMDKSTDVIAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLTRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRINDF 420
Query: 477 AERELLE 483
+ L+
Sbjct: 421 TRKATLD 427
>gi|15888604|ref|NP_354285.1| NADH ubiquinone oxidoreductase chain F [Agrobacterium fabrum str.
C58]
gi|335035090|ref|ZP_08528433.1| NADH dehydrogenase I subunit F [Agrobacterium sp. ATCC 31749]
gi|15156324|gb|AAK87070.1| NADH ubiquinone oxidoreductase chain F [Agrobacterium fabrum str.
C58]
gi|333793521|gb|EGL64875.1| NADH dehydrogenase I subunit F [Agrobacterium sp. ATCC 31749]
Length = 434
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 291/424 (68%), Positives = 351/424 (82%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYG+ D LKG M RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGLKDKSLKGVMARGHWDGTKQIIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +DGRP YLVVNADESEPGTCKDREI+R+DPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKENDGRPHYLVVNADESEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN +G+D+D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYDAGLLGKNN-KNGWDYDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGASWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHV +PCT E+ + + +ELI+ HCGG+RGGWDNLL VIPGG+S P++ D
Sbjct: 241 LFMVSGHVERPCTFEDALGLSFRELIEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V+S GT +IVMDKSTDV+ AIAR++ F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AIMDFDGMREVKSSFGTGGMIVMDKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ GNA+ EIDML EVTKQIEGHTICALGDAAAWPVQ LIR+FRPE+E+RI ++
Sbjct: 361 VLERMVKGNAQKREIDMLFEVTKQIEGHTICALGDAAAWPVQALIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
R +
Sbjct: 421 YRAM 424
>gi|146278038|ref|YP_001168197.1| NADH dehydrogenase I subunit F [Rhodobacter sphaeroides ATCC 17025]
gi|145556279|gb|ABP70892.1| NADH-quinone oxidoreductase, F subunit [Rhodobacter sphaeroides
ATCC 17025]
Length = 431
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 292/417 (70%), Positives = 347/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYGM D LKGAM RG W T DL+ G D I++ VK SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGMGDRSLKGAMARGQWDGTADLLALGRDRIIDIVKTSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRPSYLV+NADESEP TCKDREIMRHDPH L+EG L++G M A AA
Sbjct: 62 TGLKWSFMPKQSDGRPSYLVINADESEPATCKDREIMRHDPHTLIEGALLSGFAMGAVAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ E++ L+ A EAY AGL+G+NA SGYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREKEALQAAIDEAYDAGLIGRNAAKSGYDFDIYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA +GLYGCPTTV NVE++AV P ILRRG +WFA FGR NN+G K
Sbjct: 182 SLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVIPAILRRGGEWFAGFGRPNNAGVK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC +EE MSI +KELI++H GGVRGGW NL AVIPGG+S P++P C+D
Sbjct: 242 LFAMSGHVNTPCVIEESMSISMKELIEKHGGGVRGGWKNLKAVIPGGASCPIIPAEQCED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD ++ ++S GTA +IVMD+ TDV+ A+ RL+ F+KHESCGQCTPCREGTGW+
Sbjct: 302 AVMDYDGMRELKSSFGTACMIVMDQQTDVIKAVWRLAKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRH+R E+E RIK
Sbjct: 362 VMDRLVRGEAEVEEIDMLLSVTKQVEGHTICALGDAAAWPIQGLIRHYREEIEDRIK 418
>gi|114764726|ref|ZP_01443911.1| NADH dehydrogenase-ubiquinone oxidoreductase, chain F [Pelagibaca
bermudensis HTCC2601]
gi|114542926|gb|EAU45947.1| NADH dehydrogenase-ubiquinone oxidoreductase, chain F [Pelagibaca
bermudensis HTCC2601]
Length = 431
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 291/417 (69%), Positives = 350/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRIFTNLYGMHD L+GA KRG W T ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LKDEDRIFTNLYGMHDRTLQGAKKRGHWDGTAGILGKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLV+NADESEP TCKDREIMRHDPH L+EG LIA M A +
Sbjct: 62 TGLKWSFMPKESDGRPAYLVINADESEPATCKDREIMRHDPHTLIEGALIASFAMGAHTS 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY AG++GKNACGSG+DFD+++H+GAGAYICGEET+LLE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYDAGMIGKNACGSGWDFDLYLHHGAGAYICGEETSLLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG WF+ FGRKNNSGTK
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGASWFSGFGRKNNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L ++GHVN P EEEMS+ ++E+I++H GG+RGGWDNL A+IPGG+S P+LPK +D
Sbjct: 242 LMGLTGHVNTPSVFEEEMSLSVREIIEKHGGGIRGGWDNLKAIIPGGASCPILPKDKLED 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ D+D ++ +S GT +IVMD++TDVV A+ RLS F+KHESCGQCTPCREGTGW+
Sbjct: 302 AIFDFDWMRENKSSFGTGCMIVMDQNTDVVKAVWRLSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M+RL G A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 362 VMDRLVRGEAEVEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHFREEIEDRIK 418
>gi|325292639|ref|YP_004278503.1| NADH dehydrogenase I subunit F [Agrobacterium sp. H13-3]
gi|418406792|ref|ZP_12980111.1| NADH dehydrogenase I subunit F [Agrobacterium tumefaciens 5A]
gi|325060492|gb|ADY64183.1| NADH dehydrogenase I chain F [Agrobacterium sp. H13-3]
gi|358007285|gb|EHJ99608.1| NADH dehydrogenase I subunit F [Agrobacterium tumefaciens 5A]
Length = 434
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 292/424 (68%), Positives = 350/424 (82%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYG+ D LKG RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGLKDKSLKGVRARGHWDGTKQIIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+R+DPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN +G+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYDAGLLGKNN-KNGWDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHV +PCT E+ + + +ELI+ HCGG+RGGWDNLL VIPGG+S P++ D
Sbjct: 241 LFMVSGHVERPCTFEDALGLSFRELIEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V+S GT +IVMDKSTDV+ AIAR++ F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AIMDFDGMREVKSSFGTGGMIVMDKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ GNA+ EIDML EVTKQIEGHTICALGDAAAWPVQ LIR+FRPE+E+RI ++
Sbjct: 361 VLERMVKGNAQKREIDMLFEVTKQIEGHTICALGDAAAWPVQALIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
R +
Sbjct: 421 YRAM 424
>gi|15603992|ref|NP_220507.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str. Madrid
E]
gi|383487538|ref|YP_005405217.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str.
Chernikova]
gi|383488384|ref|YP_005406062.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str.
Katsinyian]
gi|383489227|ref|YP_005406904.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str. Dachau]
gi|383499362|ref|YP_005412723.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str.
BuV67-CWPP]
gi|386081944|ref|YP_005998521.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str. Rp22]
gi|7387969|sp|Q9ZE33.1|NUOF_RICPR RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|3860683|emb|CAA14584.1| NADH DEHYDROGENASE I CHAIN F (nuoF) [Rickettsia prowazekii str.
Madrid E]
gi|292571708|gb|ADE29623.1| NADH dehydrogenase I chain F [Rickettsia prowazekii str. Rp22]
gi|380760417|gb|AFE48939.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str.
Chernikova]
gi|380761263|gb|AFE49784.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str.
Katsinyian]
gi|380762108|gb|AFE50628.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380762950|gb|AFE51469.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str. Dachau]
Length = 421
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 294/417 (70%), Positives = 352/417 (84%), Gaps = 2/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNLYG LK + KRGDW+ TK L+ KG D+I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLYGQQSYDLKSSQKRGDWYNTKALIDKGRDFIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCLIA + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLIASFAIGANTC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNMQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA+ G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAAIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC +EE M +PLKELI+++ GGVRGGW+NL A+IPGG+SVPLLPK +C +
Sbjct: 241 VFCISGHVNKPCNIEEVMGVPLKELIEKYAGGVRGGWNNLKAIIPGGASVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ V SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VEMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E+RIK
Sbjct: 360 VMMRLVNGNAKKNEIDTLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEIEQRIK 416
>gi|456354963|dbj|BAM89408.1| NADH dehydrogenase I subunit F [Agromonas oligotrophica S58]
Length = 441
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 298/423 (70%), Positives = 351/423 (82%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+HD L+GA +RG W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFTNLYGLHDWGLEGARRRGSWDGTKGLIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHHLVEGCLLASFAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+ A +AY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIRERERLQAAIDQAYEARLVGKDNV-HGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPADQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQIEGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQIEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|266651|sp|P29913.1|NQO1_PARDE RecName: Full=NADH-quinone oxidoreductase chain 1; AltName:
Full=NADH dehydrogenase I, chain 1; AltName: Full=NDH-1,
chain 1
gi|150598|gb|AAA25585.1| NADH dehydrogenase [Paracoccus denitrificans]
Length = 431
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 295/417 (70%), Positives = 350/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYGM D L GA KRG W T ++ +G D I++E+K SGLRGRGGAGFP
Sbjct: 2 LNDQDRIFTNLYGMGDRSLAGAKKRGHWDGTAAIIQRGRDKIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRPSYLV+NADESEP TCKDREIMRHDPH L+EG LIA M A AA
Sbjct: 62 TGMKWSFMPKESDGRPSYLVINADESEPATCKDREIMRHDPHTLIEGALIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLG+NA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFIREREALQAAIDECYDAGLLGRNAAGSGWDFDLYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG +WFASFGR NN+G K
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAEWFASFGRPNNAGVK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF ++GHVN PC VEE MSIP++ELI++H GG+RGGW NL AVIPGG+S P+L C++
Sbjct: 242 LFGLTGHVNTPCVVEEAMSIPMRELIEKHGGGIRGGWKNLKAVIPGGASCPVLTAEQCEN 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD ++ V+S GTA +IVMD+STDVV AI RLS F+KHESCGQCTPCREGTGW+
Sbjct: 302 AIMDYDGMRDVRSSFGTACMIVMDQSTDVVKAIWRLSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+MERL G+A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 VMERLVRGDAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 418
>gi|91205998|ref|YP_538353.1| NADH dehydrogenase I subunit F [Rickettsia bellii RML369-C]
gi|157826638|ref|YP_001495702.1| NADH dehydrogenase I subunit F [Rickettsia bellii OSU 85-389]
gi|122425283|sp|Q1RHA0.1|NUOF_RICBR RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|166918573|sp|A8GYE0.1|NUOF_RICB8 RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|91069542|gb|ABE05264.1| NADH dehydrogenase I chain F [Rickettsia bellii RML369-C]
gi|157801942|gb|ABV78665.1| NADH dehydrogenase I chain F [Rickettsia bellii OSU 85-389]
Length = 417
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 295/417 (70%), Positives = 347/417 (83%), Gaps = 1/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK EDRIFTNL+G LK + K GDW TK L+ KG +WI+ EVKKSGLRGRGGAGF
Sbjct: 2 LKKEDRIFTNLHGEQSHDLKSSKKLGDWDNTKALLNKGKEWIIEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G KWSFMPK S +PSYLVVNADESEPGTCKDR+I+R++PHKL+EGCL+A + A++
Sbjct: 62 TGTKWSFMPKESK-KPSYLVVNADESEPGTCKDRDILRYEPHKLIEGCLLASFAIGANSC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG++ D+++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFNCDIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M IPLKE+I++H GGVRGGWDNL A+IPGGSSVPLLPK +C+
Sbjct: 241 IFCISGHVNKPCNVEEAMGIPLKEIIEKHAGGVRGGWDNLKAIIPGGSSVPLLPKSLCET 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D+LKA S LGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 301 ADMDFDSLKAAGSSLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M RL G+AK EID L EVTK+IEGHTICALGDAAAWP+QGLI+HFR E+E RI+
Sbjct: 361 VMMRLVKGDAKKSEIDQLLEVTKEIEGHTICALGDAAAWPIQGLIKHFRNEIESRIQ 417
>gi|367473649|ref|ZP_09473197.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. ORS 285]
gi|365274045|emb|CCD85665.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. ORS 285]
Length = 441
Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust.
Identities = 297/423 (70%), Positives = 350/423 (82%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+HD L+GA +RG W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFTNLYGLHDWGLEGARRRGSWDGTKGLIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHHLVEGCLLASFAMNAHT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+ A +AY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIRERERLQAAIDQAYDAKLVGKDNI-HGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGASWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQIEGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQIEGHTICALGDAAAWPIQGLITHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|254420908|ref|ZP_05034632.1| NADH oxidoreductase (quinone), F subunit [Brevundimonas sp. BAL3]
gi|196187085|gb|EDX82061.1| NADH oxidoreductase (quinone), F subunit [Brevundimonas sp. BAL3]
Length = 437
Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust.
Identities = 298/424 (70%), Positives = 348/424 (82%), Gaps = 1/424 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG D L GA RG W+ TKD++ G DWI+N VK SGLRGRGGAG
Sbjct: 3 GILEDKDRIFTNLYGFQDWTLDGAKTRGAWNATKDMLDLGRDWIINNVKASGLRGRGGAG 62
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
F +GLKWSFMPK RP YLVVNADESEPGTCKDREIMRHDP L+EGCLIA M+A
Sbjct: 63 FSTGLKWSFMPKEVKDRPHYLVVNADESEPGTCKDREIMRHDPQLLIEGCLIASFAMQAH 122
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A YIY+RGEYV ER+ +E A ++AY A L+GK+ G+DFDV+IH+GAGAYICGEETAL
Sbjct: 123 ACYIYLRGEYVLERERMEAAVKQAYEARLIGKDNV-HGWDFDVYIHHGAGAYICGEETAL 181
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
LESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV TILRRG WFA FGR NN+G
Sbjct: 182 LESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVGTILRRGAGWFAGFGRPNNTG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKL +SGHVN PC VEE MSIPL++L++ HCGGVRGGWDNL A+IPGGSSVPL+ + +
Sbjct: 242 TKLMAISGHVNAPCVVEEAMSIPLRQLLEEHCGGVRGGWDNLKAIIPGGSSVPLITREMS 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
+ LMD+D+L+ ++SGLGTAAVIVMD STD+V AIAR+SYFYKHESCGQCTPCREGTGW+
Sbjct: 302 ETALMDFDSLREMRSGLGTAAVIVMDNSTDLVKAIARISYFYKHESCGQCTPCREGTGWM 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
W ++ER+ VG A EID+L +V Q+EGHTICALGDAAAWPVQGLIRHFR E+E RI
Sbjct: 362 WRVLERMSVGEADPSEIDLLLDVAGQVEGHTICALGDAAAWPVQGLIRHFRHEIEERIAN 421
Query: 476 HAER 479
+ R
Sbjct: 422 YRSR 425
>gi|119384975|ref|YP_916031.1| NADH dehydrogenase I subunit F [Paracoccus denitrificans PD1222]
gi|119374742|gb|ABL70335.1| NADH dehydrogenase subunit F [Paracoccus denitrificans PD1222]
Length = 431
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/417 (70%), Positives = 350/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYGM D L GA KRG W T ++ +G D I++E+K SGLRGRGGAGFP
Sbjct: 2 LNDQDRIFTNLYGMGDRSLAGAKKRGHWDGTAAIIQRGRDKIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRPSYLV+NADESEP TCKDREIMRHDPH L+EG LIA M A AA
Sbjct: 62 TGMKWSFMPKESDGRPSYLVINADESEPATCKDREIMRHDPHTLIEGALIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLG+NA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFIREREALQAAIDECYDAGLLGRNAAGSGWDFDLYLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG +WFASFGR NN+G K
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAEWFASFGRPNNAGVK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF ++GHVN PC VEE MSIP++ELI++H GG+RGGW NL AVIPGG+S P+L C++
Sbjct: 242 LFGLTGHVNTPCVVEEAMSIPMRELIEKHGGGIRGGWKNLKAVIPGGASCPVLTAEQCEN 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD ++ ++S GTA +IVMD+STDVV AI RLS F+KHESCGQCTPCREGTGW+
Sbjct: 302 AIMDYDGMRELRSSFGTACMIVMDQSTDVVKAIWRLSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+MERL G+A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 VMERLVRGDAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 418
>gi|39936010|ref|NP_948286.1| NADH dehydrogenase I subunit F [Rhodopseudomonas palustris CGA009]
gi|192291665|ref|YP_001992270.1| NADH dehydrogenase I subunit F [Rhodopseudomonas palustris TIE-1]
gi|39649864|emb|CAE28386.1| NADH-ubiquinone dehydrogenase chain F [Rhodopseudomonas palustris
CGA009]
gi|192285414|gb|ACF01795.1| NADH-quinone oxidoreductase, F subunit [Rhodopseudomonas palustris
TIE-1]
Length = 441
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/427 (68%), Positives = 354/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+ D LKGA +RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGLDDWTLKGARRRGGWEGTKAIIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+AG M A
Sbjct: 62 TGLKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHTLVEGCLLAGCAMGAHT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+ A +AY A L+GK+ GY FD+++ +GAGAYICGEETALL
Sbjct: 122 GYIYVRGEFIRERERLQAAIDQAYEAKLIGKDNV-HGYPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GL+GCPTTV NVE++AV+P ILRRG WF+S GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLFGCPTTVNNVESIAVAPDILRRGAAWFSSIGRANNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+ +SGHVN PC VEE MSIP +ELI++H GG+RGGWDNLLA+IPGG+S PL+P C+
Sbjct: 241 KLYGISGHVNTPCVVEEAMSIPFRELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAADCE 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+++MD+D +AV+S GTA VIVMDKSTDVV AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 ELIMDFDGTRAVKSSFGTAGVIVMDKSTDVVAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+++R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLDRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ + L+
Sbjct: 421 SRKATLD 427
>gi|296116530|ref|ZP_06835140.1| NADH dehydrogenase I subunit F [Gluconacetobacter hansenii ATCC
23769]
gi|295976742|gb|EFG83510.1| NADH dehydrogenase I subunit F [Gluconacetobacter hansenii ATCC
23769]
Length = 441
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 289/419 (68%), Positives = 351/419 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG +D L GA +RGDW+ T ++ +G D I+ E+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFTNLYGQNDWRLAGARQRGDWNDTAAILARGRDAIIAEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLV+N DESEPGTCKDREI+RHDPHKL+E LIA M A +
Sbjct: 62 TGVKWSFMPKTSDGRPHYLVINGDESEPGTCKDREILRHDPHKLIESALIASFAMGAHKS 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE ++L+ A +EAY AGL+G NA GSG+DFD +IH GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFFNEAQHLQHAIEEAYEAGLIGPNAAGSGWDFDFYIHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA GLYGCPTTV NVE++AV+ TILRRG WF+ GR NN+GTK
Sbjct: 182 SLEGKKGQPRMKPPFPAAMGLYGCPTTVNNVESIAVTSTILRRGAAWFSGLGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +PL+++I++H GGVRGGWDNLLAVIPGG SVP+LP+ +CD
Sbjct: 242 LMAISGHVNTPCVFEEELGVPLRDIIEKHGGGVRGGWDNLLAVIPGGCSVPMLPREVCDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A SGLGTA +IVMDKSTD++ AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 302 VLMDYDSLRAEGSGLGTACMIVMDKSTDIIRAIARFSQFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+R+ G A++EEIDML++VT+Q+EGHTICALGDAAAWP+QGLIR FRP +E RI +
Sbjct: 362 VMQRMVEGRAEIEEIDMLEQVTRQVEGHTICALGDAAAWPIQGLIRRFRPVMEERIHAY 420
>gi|154248547|ref|YP_001419505.1| NADH dehydrogenase I subunit F [Xanthobacter autotrophicus Py2]
gi|154162632|gb|ABS69848.1| NADH-quinone oxidoreductase, F subunit [Xanthobacter autotrophicus
Py2]
Length = 433
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/420 (70%), Positives = 348/420 (82%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LKGA RG+W TK ++ KG DWI+NE+K SGLRGRGGAGF
Sbjct: 2 LADKDRIFTNIYGLQDFGLKGARARGNWDGTKAILEKGRDWIINEMKTSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDREIMR+DPH L+EGCLIA M A AA
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDREIMRNDPHTLIEGCLIASFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ERK L+ A EAY AGL+GK+ Y FD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIFERKRLQAAIDEAYDAGLIGKSNI-HDYPFDLYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF ++GHVN PC VEE MSIP +EL+D+H GGVRGGWDNLL +IPGG+S P++P C D
Sbjct: 241 LFSLAGHVNTPCVVEEAMSIPFRELVDKHGGGVRGGWDNLLGIIPGGASCPVIPAEQCAD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
++MD+D +AV+S LGTA V+VMDKSTD++ AIAR+S F+KHESCGQCTPCREGTGW+W
Sbjct: 301 LIMDFDGTRAVKSSLGTAGVLVMDKSTDIIKAIARISAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ R+ G A+ EIDML EVT QIEGHTICALGDAAAWPVQGLIRH+R +E RI ++A
Sbjct: 361 VVNRMAEGRAQKREIDMLLEVTTQIEGHTICALGDAAAWPVQGLIRHYRHVIEERIDQYA 420
>gi|383486962|ref|YP_005404642.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str. GvV257]
gi|383500202|ref|YP_005413562.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str. RpGvF24]
gi|380757327|gb|AFE52564.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str. GvV257]
gi|380757899|gb|AFE53135.1| NADH dehydrogenase I subunit F [Rickettsia prowazekii str. RpGvF24]
Length = 421
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/417 (70%), Positives = 351/417 (84%), Gaps = 2/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L +ED+IFTNLYG LK + KRGDW+ TK L+ KG D+I++EVKKSGLRGRGGAGF
Sbjct: 2 LTEEDKIFTNLYGQQSYDLKSSQKRGDWYNTKALIDKGRDFIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCLIA + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLIASFAIGANTC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNMQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA+ G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAAIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC +EE M +PLKELI+++ GGVRGGW+NL A+IPGG+SVPLLPK +C +
Sbjct: 241 VFCISGHVNKPCNIEEVMGVPLKELIEKYAGGVRGGWNNLKAIIPGGASVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ V SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VEMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E+RIK
Sbjct: 360 VMMRLVNGNAKKNEIDTLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEIEQRIK 416
>gi|408785985|ref|ZP_11197725.1| NADH dehydrogenase I subunit F [Rhizobium lupini HPC(L)]
gi|424910135|ref|ZP_18333512.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392846166|gb|EJA98688.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408488174|gb|EKJ96488.1| NADH dehydrogenase I subunit F [Rhizobium lupini HPC(L)]
Length = 434
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 290/424 (68%), Positives = 350/424 (82%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYG+ D LKG + RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNLYGLKDKSLKGVLARGHWDGTKQIIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +DGRP YLVVNADESEPGTCKDREI+R+DPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKENDGRPHYLVVNADESEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLG N +G+DFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYMREREALQAAIDECYDAGLLGGNN-KNGWDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHV +PCT E+ + + +ELI+ HCGG+RGGWDNLL VIPGG+S P++ D
Sbjct: 241 LFMVSGHVERPCTFEDALGLSFRELIEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V+S GT +IVMDKSTDV+ AIAR++ F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AIMDFDGMREVKSSFGTGGMIVMDKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ GNA+ EIDML EVTKQIEGHTICALGDAAAWPVQ LIR+FRPE+E+RI ++
Sbjct: 361 VLERMVKGNAQKREIDMLFEVTKQIEGHTICALGDAAAWPVQALIRNFRPEIEKRIDQYT 420
Query: 478 EREL 481
R +
Sbjct: 421 YRAM 424
>gi|148559285|ref|YP_001258785.1| NADH dehydrogenase I subunit F [Brucella ovis ATCC 25840]
gi|256369239|ref|YP_003106747.1| NADH dehydrogenase I subunit F [Brucella microti CCM 4915]
gi|261218833|ref|ZP_05933114.1| NADH-quinone oxidoreductase [Brucella ceti M13/05/1]
gi|261314441|ref|ZP_05953638.1| NADH-quinone oxidoreductase [Brucella pinnipedialis M163/99/10]
gi|261317461|ref|ZP_05956658.1| NADH-quinone oxidoreductase [Brucella pinnipedialis B2/94]
gi|261321668|ref|ZP_05960865.1| NADH-quinone oxidoreductase [Brucella ceti M644/93/1]
gi|261752128|ref|ZP_05995837.1| NADH-quinone oxidoreductase [Brucella suis bv. 5 str. 513]
gi|265983903|ref|ZP_06096638.1| NADH-quinone oxidoreductase [Brucella sp. 83/13]
gi|265988497|ref|ZP_06101054.1| NADH-quinone oxidoreductase [Brucella pinnipedialis M292/94/1]
gi|294852164|ref|ZP_06792837.1| NADH oxidoreductase [Brucella sp. NVSL 07-0026]
gi|306838236|ref|ZP_07471088.1| NADH-quinone oxidoreductase, F subunit [Brucella sp. NF 2653]
gi|306841955|ref|ZP_07474632.1| NADH-quinone oxidoreductase, F subunit [Brucella sp. BO2]
gi|306843744|ref|ZP_07476343.1| NADH-quinone oxidoreductase, F subunit [Brucella inopinata BO1]
gi|340790438|ref|YP_004755903.1| NADH dehydrogenase I subunit F [Brucella pinnipedialis B2/94]
gi|148370542|gb|ABQ60521.1| NADH oxidoreductase (quinone), f subunit [Brucella ovis ATCC 25840]
gi|255999399|gb|ACU47798.1| NADH dehydrogenase I, F subunit [Brucella microti CCM 4915]
gi|260923922|gb|EEX90490.1| NADH-quinone oxidoreductase [Brucella ceti M13/05/1]
gi|261294358|gb|EEX97854.1| NADH-quinone oxidoreductase [Brucella ceti M644/93/1]
gi|261296684|gb|EEY00181.1| NADH-quinone oxidoreductase [Brucella pinnipedialis B2/94]
gi|261303467|gb|EEY06964.1| NADH-quinone oxidoreductase [Brucella pinnipedialis M163/99/10]
gi|261741881|gb|EEY29807.1| NADH-quinone oxidoreductase [Brucella suis bv. 5 str. 513]
gi|264660694|gb|EEZ30955.1| NADH-quinone oxidoreductase [Brucella pinnipedialis M292/94/1]
gi|264662495|gb|EEZ32756.1| NADH-quinone oxidoreductase [Brucella sp. 83/13]
gi|294820753|gb|EFG37752.1| NADH oxidoreductase [Brucella sp. NVSL 07-0026]
gi|306275935|gb|EFM57648.1| NADH-quinone oxidoreductase, F subunit [Brucella inopinata BO1]
gi|306287946|gb|EFM59357.1| NADH-quinone oxidoreductase, F subunit [Brucella sp. BO2]
gi|306406680|gb|EFM62907.1| NADH-quinone oxidoreductase, F subunit [Brucella sp. NF 2653]
gi|340558897|gb|AEK54135.1| NADH dehydrogenase I, subunit F [Brucella pinnipedialis B2/94]
Length = 435
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/419 (70%), Positives = 346/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDQSLKGAMARGHWDNTKGLIEKGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLGKN G+D D+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFMREREALQAAIDECYEAGLLGKNN-KCGWDMDIYVTHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE + IP +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFQMSGHVNTPCVVEEGLGIPFRELIEKHGGGIRGGWDNLLAVIPGGASCPVIKAEDMMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ +S GT +IVMDKSTD++ AIARLS F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AVMDFDGMREKKSSFGTGGLIVMDKSTDIIKAIARLSAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI E+
Sbjct: 361 VMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDEY 419
>gi|86749697|ref|YP_486193.1| NADH dehydrogenase I subunit F [Rhodopseudomonas palustris HaA2]
gi|86572725|gb|ABD07282.1| NADH-quinone oxidoreductase, F subunit [Rhodopseudomonas palustris
HaA2]
Length = 441
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 295/427 (69%), Positives = 354/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+ D LKGA +RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGLDDWGLKGARRRGQWEGTKAIIDKGRDWIISEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIAG M A
Sbjct: 62 TGLKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHTLVEGCLIAGCAMGAHV 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ GY FD+++ +GAGAYICGEETALL
Sbjct: 122 GYIYVRGEFIREREHLQAAIDQAYEAKLIGKDNV-HGYPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGASWFAGIGRANNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+ +SGHVN PC VEE MSIP +ELI++H GG+RGGWDNLLA+IPGG+S PL+P C+
Sbjct: 241 KLYGISGHVNTPCVVEEAMSIPFRELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAADCE 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+++MD+D +AV+S GTA VIVMDKSTDVV AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 ELIMDFDGTRAVKSSFGTAGVIVMDKSTDVVAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+++R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLDRMVHGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ + L+
Sbjct: 421 SRKATLD 427
>gi|365895269|ref|ZP_09433390.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. STM 3843]
gi|365423988|emb|CCE05932.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. STM 3843]
Length = 441
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 298/423 (70%), Positives = 351/423 (82%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+HD L+GA +RG W TK L+ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFTNLYGLHDWGLEGARRRGSWDGTKALIDKGRDWILSEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHHLVEGCLLASFAMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GKN G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAIDQAYEANLIGKNNI-HGWPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPAILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI+RHCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIERHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLGKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQIEGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQIEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|89053670|ref|YP_509121.1| NADH dehydrogenase I subunit F [Jannaschia sp. CCS1]
gi|88863219|gb|ABD54096.1| NADH dehydrogenase subunit F [Jannaschia sp. CCS1]
Length = 431
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 300/418 (71%), Positives = 350/418 (83%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YGMHD L GA +RG W TKDL+ G D IV +K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGMHDRSLAGAKQRGHWDGTKDLIGLGRDKIVEIMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREIMR+DPH L+EGCLIA M A+A
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRNDPHTLIEGCLIASFAMNANAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A EAY GLLGK+A SG+DFD+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEYIREREALQAAIDEAYEDGLLGKDAAKSGWDFDLYLAHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEG++G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRG +WFA FGR NN+GTK
Sbjct: 182 SLEGRKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAEWFAGFGRPNNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN+PC VEE MSI +ELI+ HCGG+RGGWDNL AVIPGGSSVP + D
Sbjct: 242 LFAISGHVNQPCVVEEAMSISFEELIETHCGGIRGGWDNLKAVIPGGSSVPCVRGENMRD 301
Query: 358 VLMDYDALKA-VQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+MD+D L+ +QSGLGTAAVIVMD STD++ AI RL+ FYKHESCGQCTPCREGTGW+
Sbjct: 302 AIMDFDYLRNDLQSGLGTAAVIVMDNSTDMIKAIWRLAAFYKHESCGQCTPCREGTGWMM 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+MERL G A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RI+
Sbjct: 362 RVMERLVKGEAQVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIR 419
>gi|261324919|ref|ZP_05964116.1| NADH-quinone oxidoreductase [Brucella neotomae 5K33]
gi|261300899|gb|EEY04396.1| NADH-quinone oxidoreductase [Brucella neotomae 5K33]
Length = 435
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/419 (69%), Positives = 346/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDQSLKGAMARGHWDNTKGLIEKGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLGKN G+D D+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFMREREALQAAIDECYEAGLLGKNN-KCGWDMDIYVTHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTI+RRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTIMRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE + IP +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFQMSGHVNTPCVVEEGLGIPFRELIEKHGGGIRGGWDNLLAVIPGGASCPVIKAEDMMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ +S GT +IVMDKSTD++ AIARLS F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AVMDFDGMREKKSSFGTGGLIVMDKSTDIIKAIARLSAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI E+
Sbjct: 361 VMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDEY 419
>gi|398822690|ref|ZP_10581067.1| NADH-quinone oxidoreductase, F subunit [Bradyrhizobium sp. YR681]
gi|398226640|gb|EJN12885.1| NADH-quinone oxidoreductase, F subunit [Bradyrhizobium sp. YR681]
Length = 441
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/423 (69%), Positives = 352/423 (83%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF NLYG+HD L+GA +RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFKNLYGLHDWGLEGARRRGAWDGTKTIIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASCAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ +G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAIDQAYEAKLVGKDNV-NGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELID+HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIDKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMADGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|340027659|ref|ZP_08663722.1| NADH dehydrogenase I subunit F [Paracoccus sp. TRP]
Length = 431
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/417 (70%), Positives = 348/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YGM D L GA KRG W T ++ +G D I++EVK SGLRGRGGAGFP
Sbjct: 2 LNDQDRIFTNIYGMGDRSLAGAKKRGCWDGTAAIIARGRDKIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRPSYLV+NADESEP TCKDREIMRHDPH L+EG LIA M A+ A
Sbjct: 62 TGMKWSFMPKESDGRPSYLVINADESEPATCKDREIMRHDPHTLIEGALIASFAMGANTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLG+NA GSG+DFD+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFIREREALQAAIDECYDAGLLGRNAAGSGWDFDLFLHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV PTILRRGP+WFA FGR NN+G K
Sbjct: 182 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGPEWFAGFGRPNNAGVK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF ++GH+N PC VEE MSIP++ELI++H GGVRGGW NL AVIPGG+S P+L C++
Sbjct: 242 LFGLTGHINAPCVVEEAMSIPMRELIEKHGGGVRGGWKNLKAVIPGGASCPVLTAEQCEN 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD ++ ++S GTA +IVMD+STDVV AI RLS F+KHESCGQCTPCREGTGW+
Sbjct: 302 AIMDYDGMRELRSSFGTACMIVMDQSTDVVKAIWRLSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+MERL G A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RIK
Sbjct: 362 VMERLVRGEAEIEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 418
>gi|23501694|ref|NP_697821.1| NADH dehydrogenase I subunit F [Brucella suis 1330]
gi|376280487|ref|YP_005154493.1| NADH dehydrogenase I subunit F [Brucella suis VBI22]
gi|384224481|ref|YP_005615645.1| NADH dehydrogenase I subunit F [Brucella suis 1330]
gi|23347616|gb|AAN29736.1| NADH dehydrogenase I, F subunit [Brucella suis 1330]
gi|343382661|gb|AEM18153.1| NADH dehydrogenase I subunit F [Brucella suis 1330]
gi|358258086|gb|AEU05821.1| NADH dehydrogenase I subunit F [Brucella suis VBI22]
Length = 435
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/419 (70%), Positives = 346/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDQSLKGAMARGHWDNTKGLIEKGCDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLGKN G+D D+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFMREREVLQAAIDECYEAGLLGKNN-KCGWDMDIYVTHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE + IP +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFQMSGHVNTPCVVEEGLGIPFRELIEKHGGGIRGGWDNLLAVIPGGASCPVIKAEDMMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ +S GT +IVMDKSTD++ AIARLS F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AVMDFDGMREKKSSFGTGGLIVMDKSTDIIKAIARLSAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI E+
Sbjct: 361 VMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDEY 419
>gi|161618771|ref|YP_001592658.1| NADH dehydrogenase I subunit F [Brucella canis ATCC 23365]
gi|163843080|ref|YP_001627484.1| NADH dehydrogenase I subunit F [Brucella suis ATCC 23445]
gi|260566629|ref|ZP_05837099.1| respiratory-chain NADH dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261754788|ref|ZP_05998497.1| NADH-quinone oxidoreductase [Brucella suis bv. 3 str. 686]
gi|376274448|ref|YP_005114887.1| NADH-quinone oxidoreductase [Brucella canis HSK A52141]
gi|161335582|gb|ABX61887.1| NADH-quinone oxidoreductase, F subunit [Brucella canis ATCC 23365]
gi|163673803|gb|ABY37914.1| NADH-quinone oxidoreductase, F subunit [Brucella suis ATCC 23445]
gi|260156147|gb|EEW91227.1| respiratory-chain NADH dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261744541|gb|EEY32467.1| NADH-quinone oxidoreductase [Brucella suis bv. 3 str. 686]
gi|363403015|gb|AEW13310.1| NADH-quinone oxidoreductase [Brucella canis HSK A52141]
Length = 435
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/419 (70%), Positives = 346/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDQSLKGAMARGHWDNTKGLIEKGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLGKN G+D D+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFMREREVLQAAIDECYEAGLLGKNN-KCGWDMDIYVTHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE + IP +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFQMSGHVNTPCVVEEGLGIPFRELIEKHGGGIRGGWDNLLAVIPGGASCPVIKAEDMMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ +S GT +IVMDKSTD++ AIARLS F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AVMDFDGMREKKSSFGTGGLIVMDKSTDIIKAIARLSAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI E+
Sbjct: 361 VMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDEY 419
>gi|374575843|ref|ZP_09648939.1| NADH-quinone oxidoreductase, F subunit [Bradyrhizobium sp. WSM471]
gi|374424164|gb|EHR03697.1| NADH-quinone oxidoreductase, F subunit [Bradyrhizobium sp. WSM471]
Length = 441
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/423 (69%), Positives = 353/423 (83%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF NLYG+HD L+GA +RG W TK+++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFKNLYGLHDWGLEGARRRGAWDGTKNIIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASCAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ +G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAIDQAYEAKLVGKDNV-NGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGGVRGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGVRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMADGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|386402562|ref|ZP_10087340.1| NADH-quinone oxidoreductase, F subunit [Bradyrhizobium sp. WSM1253]
gi|385743188|gb|EIG63384.1| NADH-quinone oxidoreductase, F subunit [Bradyrhizobium sp. WSM1253]
Length = 441
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 295/423 (69%), Positives = 353/423 (83%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF NLYG+HD L+GA +RG W TK+++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFKNLYGLHDWGLEGARRRGAWDGTKNIIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASCAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ +G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAIDQAYEAKLVGKDNI-NGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|299135027|ref|ZP_07028218.1| NADH-quinone oxidoreductase, F subunit [Afipia sp. 1NLS2]
gi|298590004|gb|EFI50208.1| NADH-quinone oxidoreductase, F subunit [Afipia sp. 1NLS2]
Length = 441
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/427 (69%), Positives = 355/427 (83%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+HD L+GA +RG W TK ++ KG DWIV+E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFKNLYGLHDWGLEGARRRGAWDGTKAIIDKGRDWIVSEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGMKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLVEGCLLASFAMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE++ ER++L+ A +AY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 AYIYIRGEFIREREHLQAAVDQAYEAKLIGKDNV-HGWPFDLYVTHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA+ GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAAIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN PC VE+ + I KELI++H GG+RGGWDNLLA+IPGG+S PL+P H C+
Sbjct: 241 KLFGISGHVNTPCVVEDALGITFKELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAHDCE 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+++MD+D +AV+S LGTA VIVMDKSTDVV AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 ELIMDFDGTRAVKSSLGTAGVIVMDKSTDVVAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLTRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ L+
Sbjct: 421 TRKSTLD 427
>gi|146341108|ref|YP_001206156.1| NADH dehydrogenase I subunit F [Bradyrhizobium sp. ORS 278]
gi|146193914|emb|CAL77931.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Bradyrhizobium sp. ORS 278]
Length = 441
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/423 (69%), Positives = 349/423 (82%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+ D L+GA +RG W TK L+ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFTNLYGLQDWGLEGARRRGSWDGTKGLIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHHLVEGCLLASFAMNAHT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+ A +AY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIRERERLQAAIDQAYEAKLVGKDNV-HGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGASWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQIEGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQIEGHTICALGDAAAWPIQGLITHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|225627304|ref|ZP_03785341.1| NADH-quinone oxidoreductase, F subunit [Brucella ceti str. Cudo]
gi|261758015|ref|ZP_06001724.1| respiratory-chain NADH dehydrogenase [Brucella sp. F5/99]
gi|225617309|gb|EEH14354.1| NADH-quinone oxidoreductase, F subunit [Brucella ceti str. Cudo]
gi|261737999|gb|EEY25995.1| respiratory-chain NADH dehydrogenase [Brucella sp. F5/99]
Length = 435
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/419 (69%), Positives = 346/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDQSLKGAMARGHWDNTKGLIEKGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMP+ SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPEQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLGKN G+D D+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFMREREALQAAIDECYEAGLLGKNN-KCGWDMDIYVTHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE + IP +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFQMSGHVNTPCVVEEGLGIPFRELIEKHGGGIRGGWDNLLAVIPGGASCPVIKAEDMMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ +S GT +IVMDKSTD++ AIARLS F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AVMDFDGMREKKSSFGTGGLIVMDKSTDIIKAIARLSAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI E+
Sbjct: 361 VMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDEY 419
>gi|310816709|ref|YP_003964673.1| NADH dehydrogenase I subunit F [Ketogulonicigenium vulgare Y25]
gi|308755444|gb|ADO43373.1| NADH dehydrogenase I subunit F [Ketogulonicigenium vulgare Y25]
Length = 437
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 300/431 (69%), Positives = 348/431 (80%), Gaps = 14/431 (3%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG HD L GA RG + T ++ KG DWIVNE+K SGLRGRGGAGF
Sbjct: 2 LSDQDRIFTNIYGQHDRSLAGAQMRGHFDGTAGIIAKGRDWIVNEMKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SD RP+YLVVNADESEPGTCKDREI+RH+P L+EGCL+A + A A
Sbjct: 62 TGLKWSFMPKDSD-RPAYLVVNADESEPGTCKDREILRHEPFALIEGCLVASFAINAHAC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY+ ER+ L+ A Y AGLLG NA GSG+DFD+++H+GAGAYICGEETALLE
Sbjct: 121 YIYIRGEYIREREALQAAIDACYDAGLLGANAAGSGWDFDLYLHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA AGLYGCPTTV NVE++AV+PTILRRG WF+ FGR NN+GTK
Sbjct: 181 SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVAPTILRRGASWFSGFGRPNNAGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCG-------------GVRGGWDNLLAVIPGG 344
LF +SGHVN+PC VEEEMSIP +ELIDRHCG G+RGGWDNL VIPGG
Sbjct: 241 LFAISGHVNRPCIVEEEMSIPFRELIDRHCGGIRGGGGTARHCGGIRGGWDNLKGVIPGG 300
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SSVP+LP + + +MD+D L+A QSGLGTAAVIVMD+S D+V AI RLS FYKHESCGQ
Sbjct: 301 SSVPVLPASVMGEAIMDFDWLRAQQSGLGTAAVIVMDQSVDIVKAIWRLSKFYKHESCGQ 360
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREGTGW+ +MERL G A EIDML EVTKQ+EGHTICALGDAAAWP+QGL+RH
Sbjct: 361 CTPCREGTGWMMRVMERLVAGTADPAEIDMLIEVTKQVEGHTICALGDAAAWPIQGLVRH 420
Query: 465 FRPELERRIKE 475
FRPE+E R+ +
Sbjct: 421 FRPEIEARLHQ 431
>gi|17987436|ref|NP_540070.1| NADH dehydrogenase I subunit F [Brucella melitensis bv. 1 str. 16M]
gi|62289756|ref|YP_221549.1| NADH dehydrogenase I subunit F [Brucella abortus bv. 1 str. 9-941]
gi|82699684|ref|YP_414258.1| NADH dehydrogenase I subunit F [Brucella melitensis biovar Abortus
2308]
gi|189024001|ref|YP_001934769.1| NADH dehydrogenase I subunit F [Brucella abortus S19]
gi|225852323|ref|YP_002732556.1| NADH dehydrogenase I subunit F [Brucella melitensis ATCC 23457]
gi|237815243|ref|ZP_04594241.1| NADH-quinone oxidoreductase, F subunit [Brucella abortus str. 2308
A]
gi|256264178|ref|ZP_05466710.1| respiratory-chain NADH dehydrogenase [Brucella melitensis bv. 2
str. 63/9]
gi|260545494|ref|ZP_05821235.1| respiratory-chain NADH dehydrogenase [Brucella abortus NCTC 8038]
gi|260563840|ref|ZP_05834326.1| respiratory-chain NADH dehydrogenase [Brucella melitensis bv. 1
str. 16M]
gi|260754561|ref|ZP_05866909.1| NADH-quinone oxidoreductase [Brucella abortus bv. 6 str. 870]
gi|260757782|ref|ZP_05870130.1| NADH-quinone oxidoreductase [Brucella abortus bv. 4 str. 292]
gi|260761607|ref|ZP_05873950.1| NADH-quinone oxidoreductase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883588|ref|ZP_05895202.1| NADH-quinone oxidoreductase [Brucella abortus bv. 9 str. C68]
gi|261213810|ref|ZP_05928091.1| NADH-quinone oxidoreductase [Brucella abortus bv. 3 str. Tulya]
gi|265990910|ref|ZP_06103467.1| NADH-quinone oxidoreductase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994748|ref|ZP_06107305.1| NADH-quinone oxidoreductase [Brucella melitensis bv. 3 str. Ether]
gi|297248161|ref|ZP_06931879.1| NADH oxidoreductase (quinone), F subunit [Brucella abortus bv. 5
str. B3196]
gi|376273465|ref|YP_005152043.1| NADH-quinone oxidoreductase subunit F [Brucella abortus A13334]
gi|384211183|ref|YP_005600265.1| NADH-quinone oxidoreductase subunit F [Brucella melitensis M5-90]
gi|384408283|ref|YP_005596904.1| Respiratory-chain NADH dehydrogenase, 51 kDa subunit [Brucella
melitensis M28]
gi|384444888|ref|YP_005603607.1| NADH-quinone oxidoreductase subunit F [Brucella melitensis NI]
gi|423167068|ref|ZP_17153771.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI435a]
gi|423170556|ref|ZP_17157231.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI474]
gi|423173363|ref|ZP_17160034.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI486]
gi|423177351|ref|ZP_17163997.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI488]
gi|423179987|ref|ZP_17166628.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI010]
gi|423183119|ref|ZP_17169756.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI016]
gi|423185939|ref|ZP_17172553.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI021]
gi|423189079|ref|ZP_17175689.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI259]
gi|17983129|gb|AAL52334.1| NADH-quinone oxidoreductase chain f [Brucella melitensis bv. 1 str.
16M]
gi|62195888|gb|AAX74188.1| NuoF, NADH dehydrogenase I, F subunit [Brucella abortus bv. 1 str.
9-941]
gi|82615785|emb|CAJ10783.1| Respiratory-chain NADH dehydrogenase, 51 kDa subunit [Brucella
melitensis biovar Abortus 2308]
gi|189019573|gb|ACD72295.1| Respiratory-chain NADH dehydrogenase, 51 kDa subunit [Brucella
abortus S19]
gi|225640688|gb|ACO00602.1| NADH-quinone oxidoreductase, F subunit [Brucella melitensis ATCC
23457]
gi|237790080|gb|EEP64290.1| NADH-quinone oxidoreductase, F subunit [Brucella abortus str. 2308
A]
gi|260096901|gb|EEW80776.1| respiratory-chain NADH dehydrogenase [Brucella abortus NCTC 8038]
gi|260153856|gb|EEW88948.1| respiratory-chain NADH dehydrogenase [Brucella melitensis bv. 1
str. 16M]
gi|260668100|gb|EEX55040.1| NADH-quinone oxidoreductase [Brucella abortus bv. 4 str. 292]
gi|260672039|gb|EEX58860.1| NADH-quinone oxidoreductase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674669|gb|EEX61490.1| NADH-quinone oxidoreductase [Brucella abortus bv. 6 str. 870]
gi|260873116|gb|EEX80185.1| NADH-quinone oxidoreductase [Brucella abortus bv. 9 str. C68]
gi|260915417|gb|EEX82278.1| NADH-quinone oxidoreductase [Brucella abortus bv. 3 str. Tulya]
gi|262765861|gb|EEZ11650.1| NADH-quinone oxidoreductase [Brucella melitensis bv. 3 str. Ether]
gi|263001694|gb|EEZ14269.1| NADH-quinone oxidoreductase [Brucella melitensis bv. 1 str. Rev.1]
gi|263094396|gb|EEZ18241.1| respiratory-chain NADH dehydrogenase [Brucella melitensis bv. 2
str. 63/9]
gi|297175330|gb|EFH34677.1| NADH oxidoreductase (quinone), F subunit [Brucella abortus bv. 5
str. B3196]
gi|326408830|gb|ADZ65895.1| Respiratory-chain NADH dehydrogenase, 51 kDa subunit [Brucella
melitensis M28]
gi|326538546|gb|ADZ86761.1| NADH-quinone oxidoreductase, F subunit [Brucella melitensis M5-90]
gi|349742882|gb|AEQ08425.1| NADH-quinone oxidoreductase, F subunit [Brucella melitensis NI]
gi|363401071|gb|AEW18041.1| NADH-quinone oxidoreductase, F subunit [Brucella abortus A13334]
gi|374540604|gb|EHR12104.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI474]
gi|374541956|gb|EHR13446.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI435a]
gi|374542692|gb|EHR14179.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI486]
gi|374549832|gb|EHR21274.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI010]
gi|374550351|gb|EHR21790.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI016]
gi|374550635|gb|EHR22071.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI488]
gi|374558737|gb|EHR30130.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI259]
gi|374559327|gb|EHR30715.1| NADH-quinone oxidoreductase subunit F 1 [Brucella abortus bv. 1
str. NI021]
Length = 435
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/419 (69%), Positives = 345/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDQSLKGAMARGHWDNTKGLIEKGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG M A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAMGVHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLGKN G+D D+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFMREREALQAAIDECYEAGLLGKNN-KCGWDMDIYVTHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE + IP +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFQMSGHVNTPCVVEEGLGIPFRELIEKHGGGIRGGWDNLLAVIPGGASCPVIKAEDMMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ +S GT +IVMDKSTD++ AIARLS F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AVMDFDGMREKKSSFGTGGLIVMDKSTDIIKAIARLSAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI E+
Sbjct: 361 VMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDEY 419
>gi|261221997|ref|ZP_05936278.1| NADH-quinone oxidoreductase [Brucella ceti B1/94]
gi|265997961|ref|ZP_06110518.1| NADH-quinone oxidoreductase [Brucella ceti M490/95/1]
gi|260920581|gb|EEX87234.1| NADH-quinone oxidoreductase [Brucella ceti B1/94]
gi|262552429|gb|EEZ08419.1| NADH-quinone oxidoreductase [Brucella ceti M490/95/1]
Length = 435
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/419 (69%), Positives = 346/419 (82%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDQSLKGAMARGHWDNTKGLIEKGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG + A A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAVGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE++ ER+ L+ A E Y AGLLGKN G+D D+++ +GAGAYICGEETALLE
Sbjct: 122 YIYIRGEFMREREALQAAIDECYEAGLLGKNN-KCGWDMDIYVTHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PC VEE + IP +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFQMSGHVNTPCVVEEGLGIPFRELIEKHGGGIRGGWDNLLAVIPGGASCPVIKAEDMMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ +S GT +IVMDKSTD++ AIARLS F+KHESCGQCTPCREGTGW+W
Sbjct: 301 AVMDFDGMREKKSSFGTGGLIVMDKSTDIIKAIARLSAFFKHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI E+
Sbjct: 361 VMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDEY 419
>gi|51473234|ref|YP_066991.1| NADH dehydrogenase I subunit F [Rickettsia typhi str. Wilmington]
gi|383752008|ref|YP_005427108.1| NADH dehydrogenase I subunit F [Rickettsia typhi str. TH1527]
gi|383842843|ref|YP_005423346.1| NADH dehydrogenase I subunit F [Rickettsia typhi str. B9991CWPP]
gi|81390307|sp|Q68XY3.1|NUOF_RICTY RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|51459546|gb|AAU03509.1| NADH dehydrogenase (ubiquinone) subunit F [Rickettsia typhi str.
Wilmington]
gi|380758651|gb|AFE53886.1| NADH dehydrogenase I subunit F [Rickettsia typhi str. TH1527]
gi|380759490|gb|AFE54724.1| NADH dehydrogenase I subunit F [Rickettsia typhi str. B9991CWPP]
Length = 421
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/417 (70%), Positives = 350/417 (83%), Gaps = 2/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IF NLYG LK + KRGDW+ TK L+ KG D+I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFINLYGQQSYDLKSSKKRGDWYNTKALLDKGRDFIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCLIA + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLIASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNMQRALDEAYTEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA+ G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAAIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC +EE M IPLKELI+++ GGVRGGWDNL A+IPGG+SVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNIEEAMGIPLKELIEKYAGGVRGGWDNLKAIIPGGASVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ V SGLGT +IVMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VEMDFDSLRTVGSGLGTGGIIVMDRSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M RL GNAK EI+ L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 360 VMMRLVNGNAKKTEIETLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEIEERIK 416
>gi|27380023|ref|NP_771552.1| NADH dehydrogenase I subunit F [Bradyrhizobium japonicum USDA 110]
gi|27353177|dbj|BAC50177.1| NADH ubiquinone oxidoreductase chain F [Bradyrhizobium japonicum
USDA 110]
Length = 441
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/427 (68%), Positives = 355/427 (83%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF NLYG+HD L+GA +RG W TK+++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFKNLYGLHDWGLEGARRRGAWDGTKNIIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASCAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ +G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAIDQAYEAKLVGKDNV-NGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GL+GCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLFGCPTTVNNVESIAVAPDILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AERELLE 483
+ + ++
Sbjct: 421 SHKSDID 427
>gi|68171485|ref|ZP_00544869.1| NADH-quinone oxidoreductase, F subunit [Ehrlichia chaffeensis str.
Sapulpa]
gi|88658598|ref|YP_507360.1| NADH dehydrogenase I subunit F [Ehrlichia chaffeensis str.
Arkansas]
gi|67999091|gb|EAM85758.1| NADH-quinone oxidoreductase, F subunit [Ehrlichia chaffeensis str.
Sapulpa]
gi|88600055|gb|ABD45524.1| NADH dehydrogenase I, F subunit [Ehrlichia chaffeensis str.
Arkansas]
Length = 427
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 286/425 (67%), Positives = 349/425 (82%), Gaps = 1/425 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD D++FTNL G + PFL+ A RG W +++ G + I+ E+KKSGLRGRGGAGF
Sbjct: 2 LKDSDKVFTNLSGQYSPFLRSAKSRGIWSNILEILNLGPEHIIQEIKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK +G+P+YL++NADESEPGTCKDR+I+R+DPH+L+EG LIAG M +
Sbjct: 62 TGLKWSFMPKTRKEGQPAYLIINADESEPGTCKDRDILRYDPHRLIEGILIAGFAMNVTT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L +A +EAY A L+GKNAC SGYD D+ IH GAGAYICGEETA L
Sbjct: 122 AYIYIRGEFYNEYLVLSKALEEAYKAKLIGKNACNSGYDLDIFIHRGAGAYICGEETAQL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG++G PRLKPPFPA GLYGCPTT+ NVET+A I+RRG DWFAS GR+NN+GT
Sbjct: 182 ESLEGRKGMPRLKPPFPAAIGLYGCPTTINNVETIATVSEIMRRGSDWFASLGRENNTGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVN PC VEEE+ IP+KELI+++ GGVRGGWDNLLAVIPGGSSVP+LPK ICD
Sbjct: 242 KIFCISGHVNNPCNVEEELGIPMKELIEKYAGGVRGGWDNLLAVIPGGSSVPMLPKSICD 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
V MD+D+L+AVQSGLGTA +IVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 302 TVNMDFDSLRAVQSGLGTAGLIVMDKSTDLIAAIERLSHFYMHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IM+++ G+A E ID+L +T Q+EGHTICALGDAAAWP+QGLIRHFR +E RI+++
Sbjct: 362 RIMKKMVKGDATSESIDLLLNITHQVEGHTICALGDAAAWPIQGLIRHFRNVIEDRIRDY 421
Query: 477 AEREL 481
+L
Sbjct: 422 NNDKL 426
>gi|383771517|ref|YP_005450582.1| NADP ubiquinone oxidoreductase chain F [Bradyrhizobium sp. S23321]
gi|381359640|dbj|BAL76470.1| NADP ubiquinone oxidoreductase chain F [Bradyrhizobium sp. S23321]
Length = 441
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 294/423 (69%), Positives = 353/423 (83%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF NLYG+HD L+GA +RG W TK+++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFKNLYGLHDWGLEGARRRGAWDGTKNIIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASCAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ +G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAIDQAYEAKLVGKDNV-NGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ +IAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRSIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMADGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|300023448|ref|YP_003756059.1| NADH-quinone oxidoreductase subunit F [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525269|gb|ADJ23738.1| NADH-quinone oxidoreductase, F subunit [Hyphomicrobium
denitrificans ATCC 51888]
Length = 428
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/422 (69%), Positives = 353/422 (83%), Gaps = 2/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIF NLYG HD LKGA+ RG W TK + KG D+I++EVKKSGLRGRGGAGFP
Sbjct: 2 LHDRDRIFRNLYGFHDARLKGAISRGAWDGTKFFIDKGHDYIIDEVKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +D RPSYLV+NADESEPG+CKDREIMRHDPH L+EG L+A MRA +
Sbjct: 62 TGLKWSFMPK-ADHRPSYLVINADESEPGSCKDREIMRHDPHLLIEGALLAAFAMRAHTS 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+RA EAYAA L+GKN G+DFD+++H+GAGAYICGEETA+LE
Sbjct: 121 YIYVRGEYIREREALQRAIDEAYAAKLIGKNNV-HGWDFDLYVHHGAGAYICGEETAMLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PRLKPPFPAN GLYG PTT+ NVE++AV+ ILRRG +WFA+ G NN+GTK
Sbjct: 180 SIEGKKGQPRLKPPFPANVGLYGAPTTINNVESIAVTGEILRRGANWFAALGLPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHV +PCTVEEEM IPLKELID+HCGG+RGGWDNLLAVIPGGSSV + +
Sbjct: 240 LFQISGHVERPCTVEEEMGIPLKELIDKHCGGIRGGWDNLLAVIPGGSSVRCITAEQAMN 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+DAL + SGLGTAA+IVMDKSTD++ AI R++YFYKHESCGQCTPCREGTGW+W
Sbjct: 300 VTMDFDALGKLGSGLGTAAIIVMDKSTDIIGAIRRIAYFYKHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER++ G A+ EID+L +VTKQIEGHTICALGDAAAWPVQGLI++FRP +E RI ++
Sbjct: 360 VLERMERGQAEKREIDLLFDVTKQIEGHTICALGDAAAWPVQGLIKNFRPVIEERIDQYQ 419
Query: 478 ER 479
+
Sbjct: 420 AK 421
>gi|430003209|emb|CCF18994.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Rhizobium sp.]
Length = 434
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 290/424 (68%), Positives = 346/424 (81%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGLKDKSLKGAMGRGHWDGTKQILEKGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A A
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGAHVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y AGLLGKN G+D D+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYGAGLLGKNN-KHGWDMDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVNKPCT EE M + +E+IDRHCGG+RGGWDNLL VIPGG+S P++ D
Sbjct: 241 LFMVSGHVNKPCTFEEAMGLSFREIIDRHCGGIRGGWDNLLGVIPGGASCPVVRGEDMAD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V+S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMREVKSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ GNA+ EIDML +V+KQIEGHTICALGDAAAWP+QGLIR+FRPE+E RI +
Sbjct: 361 VLERMVKGNAQKREIDMLFQVSKQIEGHTICALGDAAAWPIQGLIRNFRPEIEARIDRYT 420
Query: 478 EREL 481
+
Sbjct: 421 HNAM 424
>gi|316933898|ref|YP_004108880.1| NADH-quinone oxidoreductase subunit F [Rhodopseudomonas palustris
DX-1]
gi|315601612|gb|ADU44147.1| NADH-quinone oxidoreductase, F subunit [Rhodopseudomonas palustris
DX-1]
Length = 441
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/427 (68%), Positives = 353/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+ D LKGA +RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGLDDWTLKGARRRGAWEGTKAIIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+AG M A
Sbjct: 62 TGLKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHTLVEGCLLAGCAMGAHT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+ A +AY A L+GK+ GY FD+++ +GAGAYICGEETALL
Sbjct: 122 GYIYVRGEFIRERERLQAAIDQAYEAKLIGKDNV-HGYPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GL+GCPTTV NVE++AV+P ILRRG WF+S GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLFGCPTTVNNVESIAVAPDILRRGAAWFSSIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+ +SGHVN PC VEE M IP +ELI++H GG+RGGWDNLLA+IPGG+S PL+P C+
Sbjct: 241 KLYGISGHVNTPCVVEEAMGIPFRELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAADCE 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+++MD+D +AV+S GTA VIVMDKSTDV+ AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 ELIMDFDGTRAVKSSFGTAGVIVMDKSTDVIAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+++R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLDRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ + L+
Sbjct: 421 SRKATLD 427
>gi|91977350|ref|YP_570009.1| NADH dehydrogenase I subunit F [Rhodopseudomonas palustris BisB5]
gi|91683806|gb|ABE40108.1| NADH-quinone oxidoreductase, F subunit [Rhodopseudomonas palustris
BisB5]
Length = 441
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/427 (68%), Positives = 353/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+ D LKGA +RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGLDDWGLKGARRRGQWEGTKAIIDKGRDWIISEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+AG M A
Sbjct: 62 TGLKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHTLVEGCLVAGCAMGAHV 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 GYIYVRGEFIREREHLQAAIDQAYEAKLIGKDNV-HGFPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGASWFAGIGRANNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+ +SGHVN PC VEE MSIP +ELI++H GG+RGGWDNLLA+IPGG+S PL+P C
Sbjct: 241 KLYGISGHVNTPCVVEEAMSIPFRELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAADCQ 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+++MD+D +AV+S GTA VIVMDKSTD+V AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 ELIMDFDGTRAVKSSFGTAGVIVMDKSTDIVAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+++R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLDRMVHGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ + L+
Sbjct: 421 SRKATLD 427
>gi|307110580|gb|EFN58816.1| hypothetical protein CHLNCDRAFT_56910 [Chlorella variabilis]
Length = 949
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/438 (68%), Positives = 347/438 (79%), Gaps = 16/438 (3%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
+TH G L+D DRIFTNLYG HDPFL+GA KRGDW+RT DL+ KG +WI++EVK SG+RGR
Sbjct: 477 RTH-GNLQDSDRIFTNLYGRHDPFLEGAQKRGDWYRTADLIGKGPEWIISEVKASGIRGR 535
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GGAGF +GLKWSFMPK D RP YLVVN DE EPGT KDREIMRHDPHKLLEG L+AGV
Sbjct: 536 GGAGFSTGLKWSFMPKNFD-RPHYLVVNGDEGEPGTSKDREIMRHDPHKLLEGILLAGVA 594
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
RA AAYIYIRGEY N R +LERA EAY AG LGKNACGSG DF V+ GAGAY+CGE
Sbjct: 595 TRAQAAYIYIRGEYRNYRHSLERAIGEAYQAGYLGKNACGSGMDFHVYTQQGAGAYVCGE 654
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETALLESLEGKQG+PRLKPP+PANAGLYGCPTT+ NVET+A P ILRRG W++S GR+
Sbjct: 655 ETALLESLEGKQGRPRLKPPYPANAGLYGCPTTINNVETIASIPAILRRGSSWYSSLGRR 714
Query: 292 NNSGTKLFCVSGHVNKPCTV--------------EEEMSIPLKELIDRHCGGVRGGWDNL 337
NN+GTKLF + C +E S +ELI++H GGVRGGWDNL
Sbjct: 715 NNTGTKLFSIRHATASQCPRGCRPRQPPVHGGGGDEHTSQARQELIEKHAGGVRGGWDNL 774
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
LAVIPGGSSVPL+P+ + +VLMDYD+L+ + GT AVIVMDKSTD+V+AI RLS+FY
Sbjct: 775 LAVIPGGSSVPLVPQSVASEVLMDYDSLQEAGTYFGTGAVIVMDKSTDIVEAIRRLSWFY 834
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
KHESCGQCTPCREG+GWLW I+ R++ G A ++EIDM ++K IEGHTICALGDAAAWP
Sbjct: 835 KHESCGQCTPCREGSGWLWDILTRIQTGEADVKEIDMAISISKIIEGHTICALGDAAAWP 894
Query: 458 VQGLIRHFRPELERRIKE 475
VQGLIRHFRP +E RI+E
Sbjct: 895 VQGLIRHFRPLVEERIRE 912
>gi|357384368|ref|YP_004899092.1| NADH-ubiquinone oxidoreductase subunit F [Pelagibacterium
halotolerans B2]
gi|351593005|gb|AEQ51342.1| NADH-ubiquinone oxidoreductase chain F [Pelagibacterium
halotolerans B2]
Length = 435
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/422 (70%), Positives = 342/422 (81%), Gaps = 1/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG D L+GA +RG W+ TKDL+ +G DW+ NEVK SGLRGRGGAGF
Sbjct: 2 LTDQDRIFTNLYGQGDWGLEGARRRGSWNGTKDLLDQGRDWLTNEVKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPKV+DGRP YLVVNADESEPGTCKDREI+RHDPH L+EGCLIAG M A AA
Sbjct: 62 TGLKWSFMPKVNDGRPHYLVVNADESEPGTCKDREILRHDPHHLIEGCLIAGRAMDAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER LE A Q+AY A L+GKN G+DFD+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFMRERHRLEAAVQQAYDAKLIGKNNI-HGWDFDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV P ILRRG WFA GR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPAGMGLYGCPTTVNNVESIAVVPEILRRGASWFAGLGRDNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFCVSGHVN P T EEEM P LI++HCGG+RGGWDNLLAVIPGGSSVP +P
Sbjct: 241 LFCVSGHVNNPATFEEEMGTPFDVLIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGEKIKS 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ V S LGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AHMDFDGLREVGSSLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+MER+ G A+ EIDML VTKQ+EGHTICALGDAAAWP+QGLIR+FRP +E RI +
Sbjct: 361 VMERMVRGEAQKREIDMLFAVTKQVEGHTICALGDAAAWPIQGLIRNFRPVIEARIDAYT 420
Query: 478 ER 479
+
Sbjct: 421 YK 422
>gi|384218460|ref|YP_005609626.1| NADH ubiquinone oxidoreductase chain F [Bradyrhizobium japonicum
USDA 6]
gi|354957359|dbj|BAL10038.1| NADH ubiquinone oxidoreductase chain F [Bradyrhizobium japonicum
USDA 6]
Length = 441
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/423 (69%), Positives = 353/423 (83%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF NLYG+HD L+GA +RG W TK+++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFKNLYGLHDWGLEGARRRGAWDGTKNIIDKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A A
Sbjct: 62 TGLKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASCAMNAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ +G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAIDQAYEAKLVGKDNV-NGWPFDIYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GL+GCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLFGCPTTVNNVESIAVAPDILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M IP +ELI++HCGG+RGGWDNL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGIPFRELIEKHCGGIRGGWDNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ +IAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRSIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMADGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|414173770|ref|ZP_11428397.1| NADH-quinone oxidoreductase chain 1 [Afipia broomeae ATCC 49717]
gi|410890404|gb|EKS38203.1| NADH-quinone oxidoreductase chain 1 [Afipia broomeae ATCC 49717]
Length = 441
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/427 (68%), Positives = 351/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG D L+GA +RG W TK ++ +G DWIV E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGQGDWGLEGARRRGAWDGTKAIIDRGRDWIVAEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 62 TGMKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHLLVEGCLIASAAMGAHV 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIY+RGE++ ER++L+ A +AY A L+GK+ GY FD+++H+GAGAYICGEETALL
Sbjct: 122 AYIYVRGEFIREREHLQAAVDQAYEAKLIGKDNV-HGYPFDLYVHHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA+ GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAAIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+ +SGHVN PC VE+ MSIP +ELI++H GG+RGGWDNLLA+IPGG+S PL+P C
Sbjct: 241 KLYGISGHVNTPCVVEDAMSIPFRELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAADCQ 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D++MD+D +AV+S GTA VIVMDKSTDVV AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 DLIMDFDGTRAVKSSFGTAGVIVMDKSTDVVAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLSRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ ++
Sbjct: 421 TRKSTID 427
>gi|209885057|ref|YP_002288914.1| NADH dehydrogenase I subunit F [Oligotropha carboxidovorans OM5]
gi|337741313|ref|YP_004633041.1| NADH-quinone oxidoreductase subunit F 1 [Oligotropha
carboxidovorans OM5]
gi|386030329|ref|YP_005951104.1| NADH-quinone oxidoreductase subunit F 1 [Oligotropha
carboxidovorans OM4]
gi|209873253|gb|ACI93049.1| f subunit of NADH oxidoreductase (quinone) [Oligotropha
carboxidovorans OM5]
gi|336095397|gb|AEI03223.1| NADH-quinone oxidoreductase subunit F 1 [Oligotropha
carboxidovorans OM4]
gi|336098977|gb|AEI06800.1| NADH-quinone oxidoreductase subunit F 1 [Oligotropha
carboxidovorans OM5]
Length = 441
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 294/427 (68%), Positives = 351/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIF NLYG+ D L GA +RG W TK ++ KG DWIV+E+K SGLRGRGGAGFP
Sbjct: 2 LEDKDRIFKNLYGLDDWGLAGARRRGAWDGTKSIIEKGRDWIVSEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A A
Sbjct: 62 TGMKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHLLVEGCLLASFAMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIY+RGE++ ER++L+ A +AY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 AYIYVRGEFIREREHLQAAVDQAYEAKLIGKDNV-HGWPFDLYVTHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WF+S GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFSSIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN PC VE+ + I +ELID+H GGVRGGWDNLLAVIPGG+S PL+P C
Sbjct: 241 KLFGISGHVNTPCVVEDALGITFRELIDKHAGGVRGGWDNLLAVIPGGASCPLIPAADCQ 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D++MD+D +AV+S LGTA IVMDKSTDV+ AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 DLIMDFDGTRAVKSSLGTAGAIVMDKSTDVIAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLTRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ L+
Sbjct: 421 TRKASLD 427
>gi|383481094|ref|YP_005390009.1| NADH dehydrogenase I subunit F [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378933433|gb|AFC71936.1| NADH dehydrogenase I subunit F [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 421
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 295/420 (70%), Positives = 348/420 (82%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKLLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VEMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
>gi|154287522|ref|XP_001544556.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
gi|150408197|gb|EDN03738.1| NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
Length = 419
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 295/383 (77%), Positives = 333/383 (86%), Gaps = 3/383 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMR 155
I++E+K SGLRGRGGAGFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR
Sbjct: 10 IISEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMR 69
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
DPHKL+EGCL+AG M A+AAYIYIRGE+ +E L+RA QEAY AGL+GKNACGSGYD
Sbjct: 70 KDPHKLIEGCLVAGRAMNATAAYIYIRGEFYHEATVLQRAIQEAYQAGLIGKNACGSGYD 129
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FDV++H G GAYICGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+P
Sbjct: 130 FDVYLHRGMGAYICGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAP 189
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
TI RRG WFASFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI+RHCGGVRGGWD
Sbjct: 190 TICRRGGKWFASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWD 249
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
NLLAVIPGGSS P+LPKHICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS
Sbjct: 250 NLLAVIPGGSSTPILPKHICDDQLMDFDALKDAQSGLGTAAVIVMDKSTDVVAAISRLSA 309
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FYKHESCGQCTPCREG+ W +M+R + G A+ EIDMLQE+TKQ+EGHTICALG+A A
Sbjct: 310 FYKHESCGQCTPCREGSKWTMQMMQRFERGQAREREIDMLQELTKQVEGHTICALGEAFA 369
Query: 456 WPVQGLIRHFRPELERRIKEHAE 478
WP+QGLIRHFRPELE RI+++ +
Sbjct: 370 WPIQGLIRHFRPELEARIRKYEQ 392
>gi|115524534|ref|YP_781445.1| NADH dehydrogenase I subunit F [Rhodopseudomonas palustris BisA53]
gi|115518481|gb|ABJ06465.1| NADH-quinone oxidoreductase, F subunit [Rhodopseudomonas palustris
BisA53]
Length = 441
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/427 (68%), Positives = 351/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF N+YG+ D L GA +RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNVYGLGDWGLDGARRRGGWDGTKAIIDKGKDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A
Sbjct: 62 TGMKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHTLVEGCLLASFAMGAHT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AY+Y+RGE++ ER+ L+ A +AY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 AYVYVRGEFIRERERLQAAIDQAYEARLIGKDNI-HGWPFDLYVTHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFAS GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFASIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN PC VEE MSIP +ELI++H GG+RGGWDNLLA+IPGG+S PL+P C
Sbjct: 241 KLFGISGHVNTPCVVEEAMSIPFRELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAADCQ 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+++MD+D +AV+S GTA VIVMDKSTDV+ AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 ELIMDFDGTRAVKSSFGTAGVIVMDKSTDVIAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLSRMVEGRAHRREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ + L+
Sbjct: 421 SRKARLD 427
>gi|153009746|ref|YP_001370961.1| NADH dehydrogenase I subunit F [Ochrobactrum anthropi ATCC 49188]
gi|404320277|ref|ZP_10968210.1| NADH dehydrogenase I subunit F [Ochrobactrum anthropi CTS-325]
gi|151561634|gb|ABS15132.1| NADH-quinone oxidoreductase, F subunit [Ochrobactrum anthropi ATCC
49188]
Length = 435
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/420 (69%), Positives = 347/420 (82%), Gaps = 3/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK L+ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDQSLKGAMARGHWDNTKGLIEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGK-NACGSGYDFDVHIHYGAGAYICGEETALL 236
YIYIRGE++ ER+ L+ A E Y AGLLGK N CG +D DV + +GAGAYICGEETALL
Sbjct: 122 YIYIRGEFMREREALQAAIDECYEAGLLGKGNKCG--WDMDVLVSHGAGAYICGEETALL 179
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GT
Sbjct: 180 ESLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGT 239
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN PC +EE + IP ++LI++H GG+RGGWDNLLAVIPGG+S P++
Sbjct: 240 KLFQISGHVNTPCVIEEGLGIPFRDLIEKHGGGIRGGWDNLLAVIPGGASCPVIKGEDMM 299
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D +MD+D ++ +S GT +IVMDKSTD++ AIARL+ F+KHESCGQCTPCREGTGW+W
Sbjct: 300 DAIMDFDGMRDKKSSFGTGGLIVMDKSTDIIKAIARLAAFFKHESCGQCTPCREGTGWMW 359
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI ++
Sbjct: 360 RVMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDDY 419
>gi|379713228|ref|YP_005301566.1| NADH dehydrogenase I subunit F [Rickettsia massiliae str. AZT80]
gi|376333874|gb|AFB31106.1| NADH dehydrogenase I subunit F [Rickettsia massiliae str. AZT80]
Length = 421
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 295/420 (70%), Positives = 348/420 (82%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVK+SGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKESGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKLLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VEMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
IM RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 IMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
>gi|255647864|gb|ACU24391.1| unknown [Glycine max]
Length = 315
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/314 (93%), Positives = 310/314 (98%)
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
MRASAAYIYIRGEYVNERKNLE+ARQEAYAAGLLG+NACGSG+DFDVHIHYGAGAYICGE
Sbjct: 1 MRASAAYIYIRGEYVNERKNLEKARQEAYAAGLLGENACGSGFDFDVHIHYGAGAYICGE 60
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
E ALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP+WFASFGRK
Sbjct: 61 EAALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRK 120
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
NN+GTKLFCVSGHVNKPCTVEEEMSIPLKELI+RHCGG+RGGWDNLLAVIPGGSSVPL+P
Sbjct: 121 NNAGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGIRGGWDNLLAVIPGGSSVPLIP 180
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
KH+CDD+ MDYDALKAV +GLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG
Sbjct: 181 KHVCDDIFMDYDALKAVGTGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 240
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
TGWLW IMER+KVGNAKLEEIDMLQE+TKQIEGHTICALGDAAAWPVQGLI+HFRPELER
Sbjct: 241 TGWLWTIMERMKVGNAKLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIKHFRPELER 300
Query: 472 RIKEHAERELLEAT 485
RI+EHAERELL+AT
Sbjct: 301 RIREHAERELLQAT 314
>gi|195576920|ref|XP_002078321.1| GD22602 [Drosophila simulans]
gi|194190330|gb|EDX03906.1| GD22602 [Drosophila simulans]
Length = 499
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 309/461 (67%), Positives = 352/461 (76%), Gaps = 47/461 (10%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA+KRGDW++TK++VLKGADWIVNE+K SGLRGRGGA
Sbjct: 47 FGPLADEDRIFTNLYGRHDWRLKGALKRGDWYKTKEIVLKGADWIVNEIKTSGLRGRGGA 106
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP + +DREIMRHDPHKL+EGCLIA M A
Sbjct: 107 GFPSGMKWSFMNKPGDGRPKAWHL----------QDREIMRHDPHKLVEGCLIARRAMGA 156
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLL----------------------------- 205
AAYIYIRGE+ NE L R+ A+ +
Sbjct: 157 QAAYIYIRGEFYNEEPAL-RSEISAHPPAVRLSDADAPWAQLPTLIVRVSTSFQHATGHA 215
Query: 206 -------GKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGL 258
K ACG+GYDFDV +H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G+
Sbjct: 216 EPPSWSDWKKACGTGYDFDVFMHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGV 275
Query: 259 YGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIP 318
+GCPTTVTNVETVAV+PTI RRG WFASFGR NSGTKLF +SGHVN+PCTVEEEMSIP
Sbjct: 276 FGCPTTVTNVETVAVAPTICRRGGVWFASFGRTRNSGTKLFNISGHVNRPCTVEEEMSIP 335
Query: 319 LKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVI 378
LKELI+RHCGGV GGWDNLL VIPGGSS P++PK++CDDV+MD+D L A Q+ LGTAA+I
Sbjct: 336 LKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNVCDDVIMDFDGLIAAQTSLGTAAII 395
Query: 379 VMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEV 438
VMDKSTDV+ AIARL FYKHESCGQCTPCREG GW+ IM R G+A+ EIDML E+
Sbjct: 396 VMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGWMNKIMTRFVKGDAQPAEIDMLWEI 455
Query: 439 TKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
+KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++ HA+R
Sbjct: 456 SKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQLHAKR 496
>gi|239831691|ref|ZP_04680020.1| NADH-quinone oxidoreductase, F subunit [Ochrobactrum intermedium
LMG 3301]
gi|444310745|ref|ZP_21146364.1| NADH dehydrogenase I subunit F [Ochrobactrum intermedium M86]
gi|239823958|gb|EEQ95526.1| NADH-quinone oxidoreductase, F subunit [Ochrobactrum intermedium
LMG 3301]
gi|443485947|gb|ELT48730.1| NADH dehydrogenase I subunit F [Ochrobactrum intermedium M86]
Length = 435
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/420 (69%), Positives = 345/420 (82%), Gaps = 3/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W T L+ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDRSLKGAMARGHWDNTSGLIEKGRDWIIEEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IAG M A A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIAGCAMGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGK-NACGSGYDFDVHIHYGAGAYICGEETALL 236
YIYIRGE++ ER+ L+ A E Y AGLLGK N CG +D D+ + +GAGAYICGEETALL
Sbjct: 122 YIYIRGEFMREREALQAAIDECYEAGLLGKGNKCG--WDMDIFVTHGAGAYICGEETALL 179
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GT
Sbjct: 180 ESLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAAWFSSIGRPNNVGT 239
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN PC VEE + IP +ELI++H GG+RGGWDNLLAVIPGG+S P++
Sbjct: 240 KLFQISGHVNTPCVVEEGLGIPFRELIEKHGGGIRGGWDNLLAVIPGGASCPVIKGEDMM 299
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D +MD+D ++ +S GT +IVMDKSTD++ AIARL+ F+KHESCGQCTPCREGTGW+W
Sbjct: 300 DAIMDFDGMRDKKSSFGTGGLIVMDKSTDIIKAIARLAAFFKHESCGQCTPCREGTGWMW 359
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ GNA+ EIDML +VTKQIEGHTICALGDAAAWP+QGLIR+FRPE+E+RI ++
Sbjct: 360 RVMERMVKGNAQKREIDMLFDVTKQIEGHTICALGDAAAWPIQGLIRNFRPEIEKRIDDY 419
>gi|85717024|ref|ZP_01047986.1| NADH-quinone oxidoreductase, F subunit [Nitrobacter sp. Nb-311A]
gi|85696148|gb|EAQ34044.1| NADH-quinone oxidoreductase, F subunit [Nitrobacter sp. Nb-311A]
Length = 441
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 297/423 (70%), Positives = 349/423 (82%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+ D L GA +RG W TK +V KG DWIV+E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGLDDWRLAGARRRGAWDGTKAIVDKGRDWIVSEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+AGVGM A A
Sbjct: 62 TGMKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLLAGVGMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIYIRGE++ ER+ L+ A EAY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 GYIYIRGEFIRERERLQAAIDEAYEARLIGKDNI-HGFPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA+ GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAAIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M I +ELID HCGG+RGGW+NL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGITFRELIDTHCGGIRGGWNNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQIEGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQIEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|338739716|ref|YP_004676678.1| NADH-quinone oxidoreductase subunit F [Hyphomicrobium sp. MC1]
gi|337760279|emb|CCB66110.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
[Hyphomicrobium sp. MC1]
Length = 428
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 291/419 (69%), Positives = 348/419 (83%), Gaps = 2/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIF N+YG HD LKGA RG W TK + KG D+I++EVKKSGLRGRGGAGFP
Sbjct: 2 LHDRDRIFRNIYGFHDVSLKGAQSRGVWDGTKFFIDKGHDYIIDEVKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +D RPSYLV+NADESEPG+CKDREI+RHD H L+EG L+A MRA A
Sbjct: 62 TGLKWSFMPK-ADARPSYLVINADESEPGSCKDREILRHDAHLLVEGALLASFAMRAHAC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
Y+Y+RGEY+ ER+ L+RA EAYAA +GKN G+DFD+++H+GAGAYICGEETA+LE
Sbjct: 121 YVYVRGEYIREREALQRAIDEAYAAKFIGKNNI-HGWDFDLYVHHGAGAYICGEETAMLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYG PTT+ NVE++AV+ ILRRG WFA+ G+ NN+GTK
Sbjct: 180 SLEGKKGQPRLKPPFPANVGLYGAPTTINNVESIAVTGEILRRGSAWFAALGKPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHV +PC VEEEM IPLKELIDRHCGG+RGGWDNLLAVIPGGSSV + +
Sbjct: 240 LFQISGHVERPCVVEEEMGIPLKELIDRHCGGIRGGWDNLLAVIPGGSSVRCITAEQAEA 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+DAL + SGLGTAAVIVMDKSTD++ AI R++YFYKHESCGQCTPCREGTGW+W
Sbjct: 300 VTMDFDALGKLGSGLGTAAVIVMDKSTDIIAAIRRIAYFYKHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER++ G A+ EID+L EV+KQIEGHTICALGDAAAWP+QGLI +FRP +E+RI ++
Sbjct: 360 VMERMERGEAEKREIDLLFEVSKQIEGHTICALGDAAAWPIQGLINNFRPVIEQRIDDY 418
>gi|338974268|ref|ZP_08629630.1| NADH-ubiquinone oxidoreductase chain F [Bradyrhizobiaceae bacterium
SG-6C]
gi|414166634|ref|ZP_11422866.1| NADH-quinone oxidoreductase chain 1 [Afipia clevelandensis ATCC
49720]
gi|338232995|gb|EGP08123.1| NADH-ubiquinone oxidoreductase chain F [Bradyrhizobiaceae bacterium
SG-6C]
gi|410892478|gb|EKS40270.1| NADH-quinone oxidoreductase chain 1 [Afipia clevelandensis ATCC
49720]
Length = 441
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/427 (68%), Positives = 348/427 (81%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG D LKGA RG W TK ++ KG DWIVNE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGQGDWGLKGARARGAWDGTKAIIDKGRDWIVNEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 62 TGMKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHLLVEGCLIASAAMGAHV 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+GK+ GY FD+++H+GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAVDQAYEAKLIGKDNV-HGYPFDLYVHHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WF+S GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFSSIGRANNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+ +SGHVN PC VE+ M + +ELI++H GG+RGGWDNLLA+IPGG+S PL+P C
Sbjct: 241 KLYGISGHVNTPCVVEDAMGVTFRELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAADCQ 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D++MD+D +AV+S GTA +IVMDKSTDVV AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 DLIMDFDGTRAVKSSFGTAGMIVMDKSTDVVAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLSRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ L+
Sbjct: 421 TRKATLD 427
>gi|157964179|ref|YP_001499003.1| NADH dehydrogenase I subunit F [Rickettsia massiliae MTU5]
gi|166918575|sp|A8F0M0.1|NUOF_RICM5 RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|157843955|gb|ABV84456.1| NADH dehydrogenase I chain F [Rickettsia massiliae MTU5]
Length = 421
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/420 (70%), Positives = 347/420 (82%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNAC SG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNACDSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKLLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VEMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
>gi|90423909|ref|YP_532279.1| NADH dehydrogenase I subunit F [Rhodopseudomonas palustris BisB18]
gi|90105923|gb|ABD87960.1| NADH-quinone oxidoreductase, F subunit [Rhodopseudomonas palustris
BisB18]
Length = 441
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/427 (68%), Positives = 351/427 (82%), Gaps = 2/427 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG D L+GA +RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGQGDWGLEGARRRGSWDGTKAIIEKGRDWIINEMKTSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK S DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+A M A
Sbjct: 62 TGMKWSFMPKESTDGRPSYLVVNADESEPGTCKDREIMRHDPHVLVEGCLLASFAMGAKV 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER++L+ A +AY A L+G++ G+ F++++ +GAGAYICGEETALL
Sbjct: 122 CYIYVRGEFIREREHLQAAVDQAYEAKLIGQDNI-HGWPFELYVTHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WF+S GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFSSIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN PC VEE M IP +ELI++H GG+RGGWDNLLA+IPGG+S PL+P C
Sbjct: 241 KLFGISGHVNTPCVVEEAMGIPFRELIEKHGGGIRGGWDNLLAIIPGGASCPLIPAADCG 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+++MD+D +AV+S LGTA VIVMDKSTDVV AIAR+SYF+KHESCGQCTPCREGTGW+W
Sbjct: 301 ELIMDFDGTRAVKSSLGTAGVIVMDKSTDVVAAIARISYFFKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLIR FRPE+ERRI +
Sbjct: 361 RVLSRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIRAFRPEIERRIDDF 420
Query: 477 AERELLE 483
+ R L+
Sbjct: 421 SRRAALD 427
>gi|67459570|ref|YP_247194.1| NADH dehydrogenase I subunit F [Rickettsia felis URRWXCal2]
gi|75536030|sp|Q4UKA6.1|NUOF_RICFE RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|67005103|gb|AAY62029.1| NADH dehydrogenase I chain F [Rickettsia felis URRWXCal2]
Length = 422
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 293/417 (70%), Positives = 346/417 (82%), Gaps = 2/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG ++I+ EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWDNTKALLDKGREFIIEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNS-AKPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANDC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M RL GNA+ EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 360 VMMRLVKGNAQKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEERIK 416
>gi|58617220|ref|YP_196419.1| NADH dehydrogenase I subunit F [Ehrlichia ruminantium str. Gardel]
gi|58416832|emb|CAI27945.1| NADH-quinone oxidoreductase chain F [Ehrlichia ruminantium str.
Gardel]
Length = 425
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 287/417 (68%), Positives = 344/417 (82%), Gaps = 1/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+D++FTNL G PFLK A RG W D++ G++ I+ EVKKSGLRGRGGAGF
Sbjct: 2 LEDKDKVFTNLSGQGSPFLKAAKSRGIWSNILDILNLGSEHIIQEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK +G+P+YLVVNADESEPGTCKDR+I+R++PH+L+EG LIAG MR +
Sbjct: 62 TGLKWSFMPKTRKEGQPAYLVVNADESEPGTCKDRDILRYEPHRLIEGILIAGFAMRVTT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L A +EAY A L+GKNAC SGYD D+ IH GAGAYICGEETA L
Sbjct: 122 AYIYIRGEFYNEYLILSEALKEAYKAKLIGKNACKSGYDIDIFIHRGAGAYICGEETAQL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG++G PRLKPPFPA GLYGCPTT+ NVET+A ILRRG +WFAS G++NN+GT
Sbjct: 182 ESLEGRKGMPRLKPPFPAAIGLYGCPTTINNVETIATIGEILRRGSNWFASLGKENNTGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVN PC VEEE+ IP++ELI+++ GGVRGGWDNLLAVIPGGSSVP+LPK ICD
Sbjct: 242 KIFCISGHVNNPCNVEEELGIPMRELIEKYAGGVRGGWDNLLAVIPGGSSVPVLPKSICD 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ MD+D+L+AVQSGLGTA +IVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 302 TITMDFDSLRAVQSGLGTAGLIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
IM +L G A ++ID+L ++ QIEGHTICALGDAAAWPVQGLIRHFR +E RI
Sbjct: 362 KIMRKLVKGTATYDDIDLLLSISYQIEGHTICALGDAAAWPVQGLIRHFRGVIEERI 418
>gi|418055565|ref|ZP_12693619.1| NADH-quinone oxidoreductase, F subunit [Hyphomicrobium
denitrificans 1NES1]
gi|353209843|gb|EHB75245.1| NADH-quinone oxidoreductase, F subunit [Hyphomicrobium
denitrificans 1NES1]
Length = 428
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/422 (69%), Positives = 349/422 (82%), Gaps = 2/422 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIF NLYG H LKGA+ RG W TK + KG D+I++EVKKSGLRGRGGAGFP
Sbjct: 2 LHDRDRIFRNLYGFHHAGLKGAISRGAWDGTKFFIDKGHDYIIDEVKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK +D RPSYLV+NADESEPG+CKDREI+RHDPH L+EG L+A MRA +
Sbjct: 62 TGLKWSFMPK-ADQRPSYLVINADESEPGSCKDREILRHDPHLLIEGALLASFAMRARTS 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+RA EAY A L+GKN G+DFD+ +H+GAGAYICGEETA+LE
Sbjct: 121 YIYVRGEYIREREALQRAIDEAYEAKLIGKNNV-HGWDFDLVVHHGAGAYICGEETAMLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PRLKPPFPAN GLYG PTT+ NVE++AV+ ILRRG WFA+ G NN+GTK
Sbjct: 180 SIEGKKGQPRLKPPFPANVGLYGAPTTINNVESIAVTGEILRRGSSWFAALGLPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHV +PCTVEEEM IPLKELID+HCGG+RGGWDNLLAVIPGGSSV + +
Sbjct: 240 LFQISGHVERPCTVEEEMGIPLKELIDKHCGGIRGGWDNLLAVIPGGSSVRCITAEQAMN 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+DAL + SGLGTAAVIVMDKSTD++ AI R+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 300 VTMDFDALGKLGSGLGTAAVIVMDKSTDIIGAIRRISYFYKHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER++ G A+ EID+L +VTKQIEGHTICALGDAAAWPVQGLI++FRP +E RI ++
Sbjct: 360 VLERMERGQAEKREIDLLFDVTKQIEGHTICALGDAAAWPVQGLIKNFRPVIEERIDQYQ 419
Query: 478 ER 479
+
Sbjct: 420 AK 421
>gi|157803300|ref|YP_001491849.1| NADH dehydrogenase I subunit F [Rickettsia canadensis str. McKiel]
gi|166918574|sp|A8EXI1.1|NUOF_RICCK RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|157784563|gb|ABV73064.1| NADH dehydrogenase I chain F [Rickettsia canadensis str. McKiel]
Length = 420
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 290/416 (69%), Positives = 347/416 (83%), Gaps = 1/416 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IF NL+G LK + KRGDW TK L+ KG D+I+ EVK+SGLRGRGGAGF
Sbjct: 2 LKEEDKIFINLHGQQSHDLKSSKKRGDWDNTKALLDKGRDFIIEEVKQSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFDCNIYLHCGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA+ GLYGCPTT+ NVE++AV PTILRRG +WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPASFGLYGCPTTINNVESIAVVPTILRRGANWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M IPLKELI+++ GGV+GGW+NL A+IPGGSSVPL+PK IC+
Sbjct: 241 VFCISGHVNKPCNVEEVMGIPLKELIEKYAGGVQGGWNNLKAIIPGGSSVPLIPKSICET 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVM++STD+V AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 301 VDMDFDSLRTAGSGLGTGGIIVMNQSTDIVYAIARLSKFYMHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+M RL GNAK EID L VTK IEGHTICALGDAAAWP+QGLIRHFR E+E RI
Sbjct: 361 VMMRLVKGNAKKSEIDQLLSVTKAIEGHTICALGDAAAWPIQGLIRHFRDEIEERI 416
>gi|58579167|ref|YP_197379.1| NADH dehydrogenase I subunit F [Ehrlichia ruminantium str.
Welgevonden]
gi|58417793|emb|CAI26997.1| NADH-quinone oxidoreductase chain F [Ehrlichia ruminantium str.
Welgevonden]
Length = 425
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 287/417 (68%), Positives = 344/417 (82%), Gaps = 1/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+D++FTNL G PFLK A RG W D++ G++ I+ EVKKSGLRGRGGAGF
Sbjct: 2 LEDKDKVFTNLSGQGSPFLKSAKSRGIWSNILDILNLGSEHIIQEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK +G+P+YLVVNADESEPGTCKDR+I+R++PH+L+EG LIAG MR +
Sbjct: 62 TGLKWSFMPKTRKEGQPAYLVVNADESEPGTCKDRDILRYEPHRLIEGILIAGFAMRVTT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L A +EAY A L+GKNAC SGYD D+ IH GAGAYICGEETA L
Sbjct: 122 AYIYIRGEFYNEYLILSEALKEAYKAKLIGKNACKSGYDIDIFIHRGAGAYICGEETAQL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG++G PRLKPPFPA GLYGCPTT+ NVET+A ILRRG +WFAS G++NN+GT
Sbjct: 182 ESLEGRKGNPRLKPPFPAAIGLYGCPTTINNVETIATIGEILRRGSNWFASLGKENNTGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVN PC VEEE+ IP++ELI+++ GGVRGGWDNLLAVIPGGSSVP+LPK ICD
Sbjct: 242 KIFCISGHVNNPCNVEEELGIPMRELIEKYAGGVRGGWDNLLAVIPGGSSVPVLPKSICD 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ MD+D+L+AVQSGLGTA +IVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 302 TITMDFDSLRAVQSGLGTAGLIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
IM +L G A ++ID+L ++ QIEGHTICALGDAAAWPVQGLIRHFR +E RI
Sbjct: 362 KIMRKLVKGTATYDDIDLLLSISYQIEGHTICALGDAAAWPVQGLIRHFRGVIEERI 418
>gi|226470474|emb|CAX70517.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Schistosoma
japonicum]
Length = 432
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/393 (74%), Positives = 335/393 (85%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+G L DEDRIFTNLYG HD LKGAMKRG W++TK+++LKG+DWI+ E+KKSGLRGRGGA
Sbjct: 38 YGPLSDEDRIFTNLYGRHDWRLKGAMKRGHWYKTKEIILKGSDWIIEEIKKSGLRGRGGA 97
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG M A
Sbjct: 98 GFPSGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHTLIEGCLIAGKAMGA 157
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+ AYIYIRGE+ NE N++ A +EAY AG LGKNACG+G++FDV++H GAGAYICGEETA
Sbjct: 158 NVAYIYIRGEFYNEASNMQLAIKEAYEAGFLGKNACGTGFNFDVYMHRGAGAYICGEETA 217
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAVSPTI RRG DWFASFGR+ N
Sbjct: 218 LIESIEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVSPTICRRGGDWFASFGRERNR 277
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLF +SGHVN PCTVEEEMSIP+++LI+RH GGV GGWDNLLAVIPGGSS PLLPK I
Sbjct: 278 GTKLFNISGHVNNPCTVEEEMSIPMRDLIERHAGGVIGGWDNLLAVIPGGSSTPLLPKDI 337
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C VLMD+DAL SGLGTAA+IVM++S DVV+ I+RL FY+HESCGQCTPCREG W
Sbjct: 338 CSTVLMDFDALVQANSGLGTAALIVMNRSADVVNCISRLIKFYEHESCGQCTPCREGCRW 397
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTI 447
+ IM R GNA EIDM+ E++KQ+EG TI
Sbjct: 398 MGQIMSRFVKGNANKSEIDMIWEISKQMEGRTI 430
>gi|383312123|ref|YP_005364924.1| NADH dehydrogenase I subunit F [Candidatus Rickettsia amblyommii
str. GAT-30V]
gi|378930783|gb|AFC69292.1| NADH dehydrogenase I subunit F [Candidatus Rickettsia amblyommii
str. GAT-30V]
Length = 418
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/418 (70%), Positives = 345/418 (82%), Gaps = 2/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWEDTKALLDKGRDCIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFADIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+M RL GNAK EID L VTK+IEGHTICALGDAA WP+QGLIRHFR E+E RIK+
Sbjct: 360 VMMRLVEGNAKKSEIDELLNVTKEIEGHTICALGDAAVWPIQGLIRHFRSEIEARIKK 417
>gi|57239209|ref|YP_180345.1| NADH dehydrogenase I subunit F [Ehrlichia ruminantium str.
Welgevonden]
gi|57161288|emb|CAH58209.1| NADH-quinone oxidoreductase chain F [Ehrlichia ruminantium str.
Welgevonden]
Length = 425
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 287/417 (68%), Positives = 344/417 (82%), Gaps = 1/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+D++FTNL G PFLK A RG W D++ G++ I+ EVKKSGLRGRGGAGF
Sbjct: 2 LEDKDKVFTNLSGQGSPFLKSAKSRGIWSNILDILNLGSEHIIQEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK +G+P+YLVVNADESEPGTCKDR+I+R++PH+L+EG LIAG MR +
Sbjct: 62 TGLKWSFMPKTRKEGQPAYLVVNADESEPGTCKDRDILRYEPHRLIEGILIAGFAMRVTT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L A +EAY A L+GKNAC SGYD D+ IH GAGAYICGEETA L
Sbjct: 122 AYIYIRGEFYNEYLILSEALKEAYKAKLIGKNACKSGYDIDIFIHRGAGAYICGEETAQL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG++G PRLKPPFPA GLYGCPTT+ NVET+A ILRRG +WFAS G++NN+GT
Sbjct: 182 ESLEGRKGMPRLKPPFPAAIGLYGCPTTINNVETIATIGEILRRGSNWFASLGKENNTGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVN PC VEEE+ IP++ELI+++ GGVRGGWDNLLAVIPGGSSVP+LPK ICD
Sbjct: 242 KIFCISGHVNNPCNVEEELGIPMRELIEKYAGGVRGGWDNLLAVIPGGSSVPVLPKSICD 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ MD+D+L+AVQSGLGTA +IVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 302 TITMDFDSLRAVQSGLGTAGLIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
IM +L G A ++ID+L ++ QIEGHTICALGDAAAWPVQGLIRHFR +E RI
Sbjct: 362 KIMRKLVKGTATYDDIDLLLSISYQIEGHTICALGDAAAWPVQGLIRHFRGVIEERI 418
>gi|75676073|ref|YP_318494.1| NADH dehydrogenase I subunit F [Nitrobacter winogradskyi Nb-255]
gi|74420943|gb|ABA05142.1| NADH dehydrogenase subunit F [Nitrobacter winogradskyi Nb-255]
Length = 441
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 297/423 (70%), Positives = 347/423 (82%), Gaps = 2/423 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+ D L GA +RG W TK +V KG DWIV+E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGLDDWRLAGARRRGAWDGTKAIVGKGRDWIVSEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+AGVGM A A
Sbjct: 62 TGMKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLLAGVGMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIYIRGE++ ER+ L+ A EAY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 GYIYIRGEFIRERERLQAAIDEAYEARLIGKDNI-HGFPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFCVSGHV +PC VEE M I +ELID HCGG+RGGW NL AVIPGGSSV ++P
Sbjct: 241 KLFCVSGHVERPCNVEEAMGITFRELIDTHCGGIRGGWGNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLSKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMAEGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIAHFRHEIEERIDQY 420
Query: 477 AER 479
+ +
Sbjct: 421 SHK 423
>gi|379022511|ref|YP_005299172.1| NADH dehydrogenase I subunit F [Rickettsia canadensis str. CA410]
gi|376323449|gb|AFB20690.1| NADH dehydrogenase I subunit F [Rickettsia canadensis str. CA410]
Length = 420
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 291/416 (69%), Positives = 346/416 (83%), Gaps = 1/416 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IF NL+G LK + KRGDW TK L+ KG D+I+ EVK+SGLRGRGGAGF
Sbjct: 2 LKEEDKIFINLHGQQSHDLKSSKKRGDWDNTKALLDKGRDFIIEEVKQSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFDCNIYLHCGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG +WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAIFGLYGCPTTINNVESIAVVPTILRRGANWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M IPLKELI+++ GGV+GGW+NL A+IPGGSSVPL+PK IC+
Sbjct: 241 VFCISGHVNKPCNVEEVMGIPLKELIEKYAGGVQGGWNNLKAIIPGGSSVPLIPKSICET 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVM+KSTD+V AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 301 VDMDFDSLRTAGSGLGTGGIIVMNKSTDIVYAIARLSKFYMHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+M RL GNAK EID L VTK IEGHTICALGDAAAWP+QGLIRHFR E+E RI
Sbjct: 361 VMMRLVKGNAKKSEIDQLLSVTKAIEGHTICALGDAAAWPIQGLIRHFRDEIEERI 416
>gi|189183823|ref|YP_001937608.1| NADH dehydrogenase I subunit F [Orientia tsutsugamushi str. Ikeda]
gi|189180594|dbj|BAG40374.1| NADH dehydrogenase I chain F [Orientia tsutsugamushi str. Ikeda]
Length = 422
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 288/418 (68%), Positives = 346/418 (82%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L ED+IFTNL G L A KRGDWH TKDL+L +WI+ E+KKSGLRGRGGAGFP
Sbjct: 2 LNIEDKIFTNLSGSMAVDLASAKKRGDWHATKDLILNSREWIIEEIKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK S+ + +YLVVNADESEPGTCKDR+I+R++PHKL+EGCL+A + A
Sbjct: 62 TGLKWSFMPKNSE-KATYLVVNADESEPGTCKDRDIIRYEPHKLIEGCLLAAYAIGAQTC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY NE L+ A QEAY A L+G N+CG+ ++F++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEYYNEALILQNAIQEAYDARLIGLNSCGTDFNFNLYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTT+ NVE++AV PTILRRG WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANIGLYGCPTTINNVESIAVVPTILRRGAKWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+F +SGHVN PC +EE M +PLK LI+++ GGVRGGWDNL A+IPGGSSVPL+PK+ICD
Sbjct: 241 IFSISGHVNNPCNIEEAMGVPLKYLIEKYAGGVRGGWDNLKAIIPGGSSVPLIPKNICDT 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+LK+V SGLGT +IVMD +TD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 301 VEMDFDSLKSVGSGLGTGGIIVMDNNTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
IM RL G+A + +IDML +VTKQIEG+TICALGDAAAWP+QGLI+HFR E+E RIK
Sbjct: 361 IMMRLVKGSASVSDIDMLLDVTKQIEGNTICALGDAAAWPIQGLIKHFRHEIEDRIKN 418
>gi|341583381|ref|YP_004763872.1| NADH dehydrogenase I subunit F [Rickettsia heilongjiangensis 054]
gi|340807607|gb|AEK74195.1| NADH dehydrogenase I subunit F [Rickettsia heilongjiangensis 054]
Length = 421
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 293/420 (69%), Positives = 345/420 (82%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRNILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
>gi|148284884|ref|YP_001248974.1| NADH dehydrogenase I subunit F [Orientia tsutsugamushi str.
Boryong]
gi|146740323|emb|CAM80727.1| NADH dehydrogenase I chain F [Orientia tsutsugamushi str. Boryong]
Length = 422
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 287/418 (68%), Positives = 345/418 (82%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L ED+IFTNL G L A KRGDW+ TK+L+L +WI+ E+K SGLRGRGGAGFP
Sbjct: 2 LNIEDKIFTNLSGAMAVDLASAKKRGDWYTTKNLILNSREWIIEEIKSSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK S+ + +YLVVNADESEPGTCKDR+I+R++PHKL+EGCL+A + A
Sbjct: 62 TGLKWSFMPKNSE-KATYLVVNADESEPGTCKDRDIIRYEPHKLIEGCLLAAYAIGAQTC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY NE L+ A QEAY A L+G NACG+ ++F++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEYYNEALILQNAIQEAYGARLIGLNACGTDFNFNLYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTT+ NVE++AV PTILRRG WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPANTGLYGCPTTINNVESIAVVPTILRRGAKWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+F +SGHVN PC +EE M +PLK LI+++ GGVRGGWDNL A+IPGGSSVPL+PK+ICD
Sbjct: 241 IFSISGHVNNPCNIEEAMGVPLKYLIEKYAGGVRGGWDNLKAIIPGGSSVPLIPKNICDT 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+LKAV SGLGT +IVMD +TD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 301 VEMDFDSLKAVGSGLGTGGIIVMDNNTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
IM RL GNA + +IDM+ +VTKQIEG+TICALGDAAAWP+QGLI+HFR E+E RIK
Sbjct: 361 IMMRLVEGNASVSDIDMILDVTKQIEGNTICALGDAAAWPIQGLIKHFRHEIEDRIKN 418
>gi|383482962|ref|YP_005391876.1| NADH dehydrogenase I subunit F [Rickettsia montanensis str. OSU
85-930]
gi|378935316|gb|AFC73817.1| NADH dehydrogenase I subunit F [Rickettsia montanensis str. OSU
85-930]
Length = 421
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/420 (69%), Positives = 347/420 (82%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA E Y GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEVYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE+++V PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESISVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGV GGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVCGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ V SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RI+ ++
Sbjct: 360 VMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIRSYS 419
>gi|350273167|ref|YP_004884480.1| NADH dehydrogenase I subunit F [Rickettsia japonica YH]
gi|348592380|dbj|BAK96341.1| NADH dehydrogenase I chain F [Rickettsia japonica YH]
Length = 418
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 293/417 (70%), Positives = 344/417 (82%), Gaps = 2/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 360 VMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIK 416
>gi|406603796|emb|CCH44717.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Wickerhamomyces
ciferrii]
Length = 490
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 295/434 (67%), Positives = 357/434 (82%), Gaps = 5/434 (1%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P + H GGLKD DRIF NLYG + LK A KRGDW++TK+LVLKG W+++++KKSGLR
Sbjct: 29 PNRIH-GGLKDSDRIFQNLYGYYGHDLKSAQKRGDWYKTKELVLKGDSWLIDQIKKSGLR 87
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRGGAGFPSG+KWSFM + P Y+V+NADE EPGTCKDREIMR +PHKL+EGCL
Sbjct: 88 GRGGAGFPSGMKWSFMNPPGWEKNPGPRYVVINADEGEPGTCKDREIMRKEPHKLIEGCL 147
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
++G M A+AAYIYIRGE+ +E L+ A EAY GL+G+NACGSGYDFDV+IH G GA
Sbjct: 148 LSGRAMNATAAYIYIRGEFYDEYLILQSAIDEAYKHGLIGQNACGSGYDFDVYIHRGMGA 207
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESLEGKQGKPRLKPPFPA G++G P+TVTNVETVAV+PTILRRGPDWF+
Sbjct: 208 YICGEETALIESLEGKQGKPRLKPPFPAAVGVFGRPSTVTNVETVAVAPTILRRGPDWFS 267
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
S GR+ N GTKL+ +SGHVNKPC VEEEMSIPLK+LI++HCGGVRGGWDNLLA+IPGGSS
Sbjct: 268 SLGRERNVGTKLYGISGHVNKPCVVEEEMSIPLKDLIEKHCGGVRGGWDNLLAIIPGGSS 327
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
P L + + LMDYD LK V S LGT AVIVMDKSTD++ AI+RLS FY+HESCGQCT
Sbjct: 328 TPSLNQEMSGKALMDYDGLKDVGSSLGTGAVIVMDKSTDIIKAISRLSDFYRHESCGQCT 387
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
PCREGT WL M+R +G+AK +EIDM+ E++K+IEGH+IC LGDA+AWPVQ L+++F+
Sbjct: 388 PCREGTTWLSKTMQRFVIGDAKPKEIDMIIEMSKRIEGHSICGLGDASAWPVQALVKNFK 447
Query: 467 PELERRIKE-HAER 479
P L R+++ H E+
Sbjct: 448 PLLLERMEQFHKEK 461
>gi|262277296|ref|ZP_06055089.1| NADH oxidoreductase (quinone), f subunit [alpha proteobacterium
HIMB114]
gi|262224399|gb|EEY74858.1| NADH oxidoreductase (quinone), f subunit [alpha proteobacterium
HIMB114]
Length = 427
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 287/425 (67%), Positives = 347/425 (81%), Gaps = 1/425 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD DRIF NLYG L A+ RGDW TK+++ KG +WI+++VKKS LRGRGGAGFP
Sbjct: 2 LKDTDRIFRNLYGDESFNLSNALNRGDWKDTKEIIAKGKEWIIDQVKKSELRGRGGAGFP 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSF PK + RP YLV+NADESEPGTCKDR+I+R++P KL+EG LIA + A
Sbjct: 62 TGMKWSFAPKEPTADRPHYLVINADESEPGTCKDRDILRYEPQKLIEGSLIAAYAVGAKT 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
Y+YIRGEYVNE K L++A EAY L+GKNA GSG+DFD++IH+GAGAYICGEETALL
Sbjct: 122 CYVYIRGEYVNEGKVLQQAIDEAYEKNLIGKNAAGSGWDFDMYIHFGAGAYICGEETALL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG +G+PRLKPPFPA GLYGCPT V NVET+AV PTILRRGP+WFASFGR N GT
Sbjct: 182 ESLEGNKGQPRLKPPFPALVGLYGCPTIVNNVETIAVVPTILRRGPEWFASFGRPKNRGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SG+V PC VEEEMSIPLKELI+ H GGV GGW NL AVIPGGSS+PLLPK +CD
Sbjct: 242 KIFCISGNVVNPCNVEEEMSIPLKELIETHAGGVIGGWGNLQAVIPGGSSMPLLPKKVCD 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
++LMD+DAL +SG+GTA ++V+DKS D+V I+R+S FYKHESCGQCTPCREG+GWLW
Sbjct: 302 NILMDFDALVEAKSGMGTAGIVVIDKSQDIVSCISRISRFYKHESCGQCTPCREGSGWLW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A++ EIDML EVTKQIEGHTICA G+A+AWPVQGL+RHFR ++E +
Sbjct: 362 RMMERINRGEAEIHEIDMLLEVTKQIEGHTICAFGEASAWPVQGLLRHFREQMEEKCSNL 421
Query: 477 AEREL 481
A R++
Sbjct: 422 ANRKI 426
>gi|383502174|ref|YP_005415533.1| NADH dehydrogenase I subunit F [Rickettsia australis str. Cutlack]
gi|378933185|gb|AFC71690.1| NADH dehydrogenase I subunit F [Rickettsia australis str. Cutlack]
Length = 423
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/420 (69%), Positives = 348/420 (82%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+I+ E+KKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGEQIHDLKSSKKRGDWDNTKALLDKGRDFIIEEIKKSGLRGRGGAGFF 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANDC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRR WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRRASWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GNA+ EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMMRLVKGNAQKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEERIKSYS 419
>gi|92117738|ref|YP_577467.1| NADH dehydrogenase I subunit F [Nitrobacter hamburgensis X14]
gi|91800632|gb|ABE63007.1| NADH dehydrogenase subunit F [Nitrobacter hamburgensis X14]
Length = 441
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/421 (69%), Positives = 348/421 (82%), Gaps = 2/421 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLYG+ D L GA +RG W T+ +V KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LDDKDRIFRNLYGLDDWRLAGARRRGAWDGTRTIVDKGRDWIISEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK +DGRPSYLVVNADESEPGTCKDREIMRHDPH L+EGCL+AGVGM A A
Sbjct: 62 TGMKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPHLLIEGCLLAGVGMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIYIRGE++ ER++L+ A EAY A L+GK+ G+ FD+++ +GAGAYICGEETALL
Sbjct: 122 GYIYIRGEFIREREHLQAAIDEAYEARLIGKDNI-HGFPFDLYVAHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG WFA GR NN GT
Sbjct: 181 ESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPDILRRGAAWFAGIGRPNNVGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLFC+SGHV +PC VEE M I +ELID HCGG+RGGW+NL AVIPGGSSV ++P
Sbjct: 241 KLFCISGHVERPCNVEEAMGITFRELIDTHCGGIRGGWNNLKAVIPGGSSVRMVPAEQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L ++SGLGTAAVIVMDKSTD++ AIAR+SYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DTPMDFDSLGKLRSGLGTAAVIVMDKSTDLIRAIARISYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML EVTKQ+EGHTICALGDAAAWP+QGLI HFR E+E RI ++
Sbjct: 361 RVLTRMADGRAHKREIDMLLEVTKQVEGHTICALGDAAAWPIQGLIAHFRHEIEARIDQY 420
Query: 477 A 477
+
Sbjct: 421 S 421
>gi|126343112|ref|XP_001368340.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Monodelphis domestica]
Length = 465
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 308/463 (66%), Positives = 357/463 (77%), Gaps = 16/463 (3%)
Query: 23 LSVGLRSFSTQGASTA-STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMK 81
LS L F++Q A T S P+K FG LKDEDRIFTNLYG H+ LKGA
Sbjct: 12 LSATLTRFTSQEAGTNLSRSGAQRDTASPKKVTFGSLKDEDRIFTNLYGRHEWRLKGAQS 71
Query: 82 RGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNAD 141
RGDW++TK+++LKG DWI+NE+K SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNAD
Sbjct: 72 RGDWYKTKEILLKGPDWILNEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNAD 131
Query: 142 ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYA 201
E EPGTCKDREIMRHDPHKL+EGCLI G M A AAYIYIRGE+ NE NL+ A +EAY
Sbjct: 132 EGEPGTCKDREIMRHDPHKLVEGCLIGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYE 191
Query: 202 AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 261
AGL+G+NACGS YDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GC
Sbjct: 192 AGLIGRNACGSDYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGC 251
Query: 262 PTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKE 321
PTTV NVETVAVSPTI RRG WFASFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKE
Sbjct: 252 PTTVANVETVAVSPTICRRGGSWFASFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKE 311
Query: 322 LIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
LI++H GGV GGWDNLL VIPGGSS PL+PK +C+ VLMD+D L Q+GLGTAAVIVMD
Sbjct: 312 LIEKHAGGVTGGWDNLLGVIPGGSSTPLIPKSVCETVLMDFDGLIQAQTGLGTAAVIVMD 371
Query: 382 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
+S V +AR + P G W+ +M R G+A++ EID E++KQ
Sbjct: 372 RS--VRTPLARPAVRM---------PLPAGVDWMNKVMWRFVKGDARVSEIDAFWEISKQ 420
Query: 442 IEGHTICALGDAAAWPVQGLIRHFRPELERRIK----EHAERE 480
IEGHTICALGD AWPVQGLIRHFRPELE R+ +H++R+
Sbjct: 421 IEGHTICALGDGPAWPVQGLIRHFRPELEDRMHRFAGQHSDRQ 463
>gi|157825290|ref|YP_001493010.1| NADH dehydrogenase I subunit F [Rickettsia akari str. Hartford]
gi|166918572|sp|A8GM77.1|NUOF_RICAH RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|157799248|gb|ABV74502.1| NADH dehydrogenase I chain F [Rickettsia akari str. Hartford]
Length = 423
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 293/420 (69%), Positives = 348/420 (82%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+I+ E+KKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGGQIHDLKSSKKRGDWDNTKALLDKGRDFIIEEIKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY L+GKNACGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKDRLIGKNACGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRR WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRRASWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ V SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMIRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEDRIKSYS 419
>gi|402772310|ref|YP_006591847.1| NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I subunit
F) [Methylocystis sp. SC2]
gi|401774330|emb|CCJ07196.1| NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I subunit
F) [Methylocystis sp. SC2]
Length = 434
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 299/421 (71%), Positives = 345/421 (81%), Gaps = 2/421 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIFTNLYG+ D L GA KRG W TK L+ KG D I+NEVK SGLRGRGGAGF
Sbjct: 2 LSDADRIFTNLYGLGDRSLAGAKKRGQWDNTKALLDKGRDAIINEVKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSD-GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK D RP YLV+NADESEPGTCKDREIMR+DPH L+EG LIA M A A
Sbjct: 62 TGLKWSFMPKEVDPRRPHYLVINADESEPGTCKDREIMRNDPHTLVEGALIASFAMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIYIRGE++ ER L++A EAY A L+GK+ GY FD+++H+GAGAYICGEETALL
Sbjct: 122 CYIYIRGEFIAERIALQKAVDEAYEARLIGKDNI-HGYPFDLYVHHGAGAYICGEETALL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA GR NN+GT
Sbjct: 181 ESLEGKKGMPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGAAWFAGIGRPNNAGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN+PC VEE MSI +ELI+ HCGGVRGGWDNLLAVIPGGSSV +P H
Sbjct: 241 KLFSISGHVNRPCNVEEAMSISFRELIETHCGGVRGGWDNLLAVIPGGSSVRCVPSHEIV 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L A++SGLGTAAVIVMDKSTD++ AIARLSYFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DCPMDFDSLVALKSGLGTAAVIVMDKSTDIIRAIARLSYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+++R+ G A +EIDML +V+KQIEGHTICALGDAAAWP+QGLI HFR +E+RI ++
Sbjct: 361 RVVQRMVEGRAHKKEIDMLFDVSKQIEGHTICALGDAAAWPIQGLITHFRDVIEKRIDQY 420
Query: 477 A 477
A
Sbjct: 421 A 421
>gi|239948357|ref|ZP_04700110.1| NADH-quinone oxidoreductase subunit F [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239922633|gb|EER22657.1| NADH-quinone oxidoreductase subunit F [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 417
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/417 (70%), Positives = 344/417 (82%), Gaps = 2/417 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+I+ EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIIEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANDC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKNACGSG+ ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNETSNIQRALDEAYKEGLIGKNACGSGFYCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVR GWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRDGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK
Sbjct: 360 VMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEERIK 416
>gi|323138150|ref|ZP_08073223.1| NADH-quinone oxidoreductase, F subunit [Methylocystis sp. ATCC
49242]
gi|322396612|gb|EFX99140.1| NADH-quinone oxidoreductase, F subunit [Methylocystis sp. ATCC
49242]
Length = 434
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/420 (70%), Positives = 344/420 (81%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIFTNLYG+ D L GA KRG W TK L+ KG D I+ EVK SGLRGRGGAGF
Sbjct: 2 LSDSDRIFTNLYGLGDRSLAGARKRGQWDNTKALLAKGRDKIIEEVKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK V RP YLV+NADESEPGTCKDREIMR+DPH L+EG L+A M A A
Sbjct: 62 TGLKWSFMPKDVDPRRPHYLVINADESEPGTCKDREIMRNDPHTLVEGALVASFAMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER+ L+RA EAYAA L+GKN GY FD+++H+GAGAYICGEETAL+
Sbjct: 122 CYIYVRGEFIAEREALQRAVDEAYAANLIGKNNV-HGYPFDLYVHHGAGAYICGEETALI 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV PTILRRGP+WFA G+ NN+GT
Sbjct: 181 ESLEGKKGMPRLKPPFPANVGLYGCPTTVNNVESIAVVPTILRRGPNWFAGIGKPNNTGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVN+PC VEE MSI +ELID HCGGVRGGWDNLLAVIPGGSSV +P H
Sbjct: 241 KLFSISGHVNRPCNVEEAMSISFRELIDTHCGGVRGGWDNLLAVIPGGSSVRCVPAHQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L + SGLGTAAVIVMDKSTD++ AIARL+YFYKHESCGQCTPCREGTGW++
Sbjct: 301 DCPMDFDSLVKLGSGLGTAAVIVMDKSTDIIRAIARLAYFYKHESCGQCTPCREGTGWMY 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+++R+ G A +EIDML +V+KQIEGHTICALGDAAAWP+QGLI HFR +E+RI ++
Sbjct: 361 RVVQRMVEGRANKKEIDMLFDVSKQIEGHTICALGDAAAWPIQGLITHFRDVIEQRIDQY 420
>gi|379018658|ref|YP_005294892.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Hlp#2]
gi|376331238|gb|AFB28472.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Hlp#2]
Length = 421
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/420 (68%), Positives = 345/420 (82%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA+ GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPASFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GN EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMMRLVKGNVTKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
>gi|353328325|ref|ZP_08970652.1| NADH dehydrogenase I subunit F [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 417
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/415 (69%), Positives = 346/415 (83%), Gaps = 2/415 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IFTNL G P L+GA KRG W +TK+L+ G++ I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEQDKIFTNLNGKETPLLEGAKKRGSWQKTKELLDLGSEKIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK + +YLVVNADESEPGTCKDR I+R++PHKLLEG L+AG + ASAA
Sbjct: 62 TGLKWSFMPK--NPPKAYLVVNADESEPGTCKDRNILRYEPHKLLEGILLAGRAISASAA 119
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L++A +EAY L+GKNAC SGYD DV IH GAGAYICGEETA LE
Sbjct: 120 YIYIRGEFYNEHLVLKKALEEAYKENLIGKNACKSGYDLDVFIHRGAGAYICGEETAQLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GL+GCPTT+ NVET+++ P IL RG +WFAS G+ NN+GTK
Sbjct: 180 SIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETISMVPDILNRGGEWFASLGKPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEE+ I L+ELI+++ GGVRGGWDNLLAVIPGGSSVPL+PK ICD
Sbjct: 240 VFCISGHVNNPCNVEEELGISLRELIEKYAGGVRGGWDNLLAVIPGGSSVPLIPKSICDT 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L+AVQSGLGTAAVIVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 300 IEMDFDSLRAVQSGLGTAAVIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
IM R+ GN K E+D L ++T QIEGHTICALGDAAAWPVQGLIRHFR +E R
Sbjct: 360 IMRRMVAGNIKPGEVDRLLDLTTQIEGHTICALGDAAAWPVQGLIRHFRHVIEDR 414
>gi|15892078|ref|NP_359792.1| NADH dehydrogenase I subunit F [Rickettsia conorii str. Malish 7]
gi|374318895|ref|YP_005065393.1| NADH dehydrogenase I subunit F [Rickettsia slovaca 13-B]
gi|383750792|ref|YP_005425893.1| NADH dehydrogenase I subunit F [Rickettsia slovaca str. D-CWPP]
gi|20139048|sp|Q92JB2.1|NUOF_RICCN RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|15619200|gb|AAL02693.1| NADH dehydrogenase I chain F [Rickettsia conorii str. Malish 7]
gi|360041443|gb|AEV91825.1| NADH dehydrogenase I chain F [Rickettsia slovaca 13-B]
gi|379773806|gb|AFD19162.1| NADH dehydrogenase I subunit F [Rickettsia slovaca str. D-CWPP]
Length = 421
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/420 (69%), Positives = 344/420 (81%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GN K EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK +
Sbjct: 360 VMMRLVKGNVKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSDS 419
>gi|296444799|ref|ZP_06886762.1| NADH-quinone oxidoreductase, F subunit [Methylosinus trichosporium
OB3b]
gi|296257747|gb|EFH04811.1| NADH-quinone oxidoreductase, F subunit [Methylosinus trichosporium
OB3b]
Length = 434
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 298/421 (70%), Positives = 341/421 (80%), Gaps = 2/421 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG D L GA KRG W TK L+ G D I+ EVK SGLRGRGGAGF
Sbjct: 2 LADKDRIFTNLYGYGDRGLAGARKRGQWDNTKALLALGRDKIIQEVKDSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSD-GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK D RPSYLV+NADESEPGTCKDREIMR+DPH L+EG ++A M A A
Sbjct: 62 TGLKWSFMPKTPDPARPSYLVINADESEPGTCKDREIMRNDPHTLVEGAMVASFAMGAHA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
YIY+RGE++ ER L+RA EAYAA L+GK+ GY FD+++H+GAGAYICGEETAL+
Sbjct: 122 CYIYVRGEFIAERVALQRAVDEAYAARLIGKDNV-HGYPFDLYVHHGAGAYICGEETALI 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV PTILRRG WFA G+ NN+GT
Sbjct: 181 ESLEGKKGMPRLKPPFPANVGLYGCPTTVNNVESIAVVPTILRRGASWFAGIGKPNNTGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KLF +SGHVNKPC VEE MSIP +ELIDRHCGGVRGG DNLLAVIPGGSSV L+P
Sbjct: 241 KLFSISGHVNKPCNVEEAMSIPFRELIDRHCGGVRGGSDNLLAVIPGGSSVRLVPADQII 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MD+D+L + SGLGTAAVIVMDKSTD++ AIARL+YFYKHESCGQCTPCREGTGW+W
Sbjct: 301 DCPMDFDSLVKLGSGLGTAAVIVMDKSTDIIRAIARLAYFYKHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A EIDML +V+KQIEGHTICALGDAAAWP+QGLI HFR E+ERRI +
Sbjct: 361 RVVTRMAEGRAHKREIDMLFDVSKQIEGHTICALGDAAAWPIQGLINHFRGEIERRIDRY 420
Query: 477 A 477
A
Sbjct: 421 A 421
>gi|379711895|ref|YP_005300234.1| NADH dehydrogenase I subunit F [Rickettsia philipii str. 364D]
gi|376328540|gb|AFB25777.1| NADH dehydrogenase I subunit F [Rickettsia philipii str. 364D]
Length = 421
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/420 (68%), Positives = 344/420 (81%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GN EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMMRLVKGNVTKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
>gi|144899470|emb|CAM76334.1| NADH-quinone oxidoreductase, F subunit [Magnetospirillum
gryphiswaldense MSR-1]
Length = 425
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 296/417 (70%), Positives = 350/417 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTNLYG+HD LKGA RGDW TK L+ KG D I+ EVK SGLRGRGGAGF
Sbjct: 2 LRDQDRIFTNLYGIHDWRLKGAQSRGDWDNTKALLAKGRDAIIEEVKTSGLRGRGGAGFG 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK RP YLV+NADE EPGTCKDREIMR DPHKL+EG L+A + A A+
Sbjct: 62 TGMKWSFMPKTEGARPHYLVINADEGEPGTCKDREIMRFDPHKLVEGALLASFAIGAHAS 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+V E ++L+ A EAYAAGL+GKNACGSG+DFD+++H GAGAYICGEE+AL+E
Sbjct: 122 YIYIRGEFVREAEHLQVAIDEAYAAGLIGKNACGSGWDFDLYVHRGAGAYICGEESALIE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTTV NVE++AV P ILRR WFA GR NSGTK
Sbjct: 182 SLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVVPAILRRSGAWFAGLGRAKNSGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LFC+SGHVNKPC VEEEM I +ELID+HCGG+RGGWDNL+ VIPGG S P+L + + ++
Sbjct: 242 LFCISGHVNKPCNVEEEMGISFRELIDKHCGGIRGGWDNLMGVIPGGCSTPVLTREVIEN 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MD+D L+ SGLGTAAVIVMDKSTD+V AI RLS FYKHESCGQCTPCREGTGW+W
Sbjct: 302 CPMDFDGLREAGSGLGTAAVIVMDKSTDIVRAITRLSRFYKHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+MER+ G+A +EEID+LQ+VTKQ+EGHTICALGDAAAWP+QGLIR+FRPE+E++I+
Sbjct: 362 MMERMDKGDATIEEIDLLQQVTKQVEGHTICALGDAAAWPIQGLIRNFRPEIEKKIR 418
>gi|34580891|ref|ZP_00142371.1| NADH dehydrogenase I chain F [Rickettsia sibirica 246]
gi|28262276|gb|EAA25780.1| NADH dehydrogenase I chain F [Rickettsia sibirica 246]
Length = 421
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/420 (69%), Positives = 344/420 (81%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNVQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GN K EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK +
Sbjct: 360 VMMRLVKGNVKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSDS 419
>gi|229586353|ref|YP_002844854.1| NADH dehydrogenase I subunit F [Rickettsia africae ESF-5]
gi|228021403|gb|ACP53111.1| NADH dehydrogenase I chain F [Rickettsia africae ESF-5]
Length = 421
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/420 (69%), Positives = 344/420 (81%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-QSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GN K EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK +
Sbjct: 360 VMMRLVKGNVKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSDS 419
>gi|190571396|ref|YP_001975754.1| NADH dehydrogenase I subunit F [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018795|ref|ZP_03334603.1| NADH dehydrogenase I, F subunit [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357668|emb|CAQ55112.1| NADH dehydrogenase I, F subunit [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995746|gb|EEB56386.1| NADH dehydrogenase I, F subunit [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 417
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/416 (69%), Positives = 345/416 (82%), Gaps = 2/416 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IF NL G P L+GA KRG W +TK+L+ G++ I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEQDKIFINLNGKETPLLEGAKKRGSWQKTKELLDLGSEKIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK + +YLVVNADESEPGTCKDR+I+R++PHKLLEG L+AG + AS A
Sbjct: 62 TGLKWSFMPK--NPLKAYLVVNADESEPGTCKDRDILRYEPHKLLEGILLAGRAISASVA 119
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L++A +EAY L+GKNAC SGYD DV IH GAGAYICGEETA LE
Sbjct: 120 YIYIRGEFYNEYLVLKKALEEAYKENLIGKNACKSGYDLDVFIHRGAGAYICGEETAQLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GL+GCPTT+ NVET+A+ P IL RG +WFAS G+ NN+GTK
Sbjct: 180 SIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILNRGGEWFASLGKPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEE+ I L+ELI+++ GGVRGGWDNLLAVIPGGSSVPL+PK ICD
Sbjct: 240 VFCISGHVNNPCNVEEELGISLRELIEKYAGGVRGGWDNLLAVIPGGSSVPLIPKSICDT 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L+A QSGLGTAAVIVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 300 IEMDFDSLRAAQSGLGTAAVIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
IM R+ GN K E+D L ++T QIEGHTICALGDAAAWPVQGLIRHFR +E RI
Sbjct: 360 IMRRMVAGNIKPGEVDKLLDLTTQIEGHTICALGDAAAWPVQGLIRHFRHIIEERI 415
>gi|157828027|ref|YP_001494269.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932725|ref|YP_001649514.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Iowa]
gi|378720827|ref|YP_005285714.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str.
Colombia]
gi|378722181|ref|YP_005287067.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Arizona]
gi|378723539|ref|YP_005288423.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Hauke]
gi|379016911|ref|YP_005293146.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Brazil]
gi|379017327|ref|YP_005293561.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Hino]
gi|166918576|sp|A8GQT6.1|NUOF_RICRS RecName: Full=NADH-quinone oxidoreductase subunit F; AltName:
Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1
subunit F
gi|27312012|gb|AAO00970.1| NADH dehydrogenase I chain F [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157800508|gb|ABV75761.1| NADH dehydrogenase I chain F [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907812|gb|ABY72108.1| NADH-quinone oxidoreductase chain F [Rickettsia rickettsii str.
Iowa]
gi|376325435|gb|AFB22675.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Brazil]
gi|376325851|gb|AFB23090.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str.
Colombia]
gi|376327205|gb|AFB24443.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Arizona]
gi|376329892|gb|AFB27128.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Hino]
gi|376332554|gb|AFB29787.1| NADH dehydrogenase I subunit F [Rickettsia rickettsii str. Hauke]
Length = 421
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/420 (68%), Positives = 343/420 (81%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GN EID L VTK IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMMRLVKGNVTKSEIDELLNVTKAIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
>gi|238650711|ref|YP_002916564.1| NADH dehydrogenase I subunit F [Rickettsia peacockii str. Rustic]
gi|238624809|gb|ACR47515.1| NADH dehydrogenase I subunit F [Rickettsia peacockii str. Rustic]
Length = 421
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/420 (68%), Positives = 344/420 (81%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++ A EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQHALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GN K EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++
Sbjct: 360 VMMRLVKGNVKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
>gi|42520789|ref|NP_966704.1| NADH dehydrogenase I subunit F [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410529|gb|AAS14638.1| NADH dehydrogenase I, F subunit, putative [Wolbachia endosymbiont
of Drosophila melanogaster]
Length = 417
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 287/415 (69%), Positives = 348/415 (83%), Gaps = 2/415 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IFTNL G P L+GA KRG W +TK+L+ G++ I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEQDKIFTNLNGKGTPLLEGAKKRGSWQKTKELLDLGSEKIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK + +YLVVNADESEPGTCKDR+I+R++PHKLLEG L+AG + AS A
Sbjct: 62 TGLKWSFMPK--NLPKAYLVVNADESEPGTCKDRDILRYEPHKLLEGILLAGKAISASVA 119
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L++A +EAY GL+GKNAC SGYD DV IH GAGAYICGEETA LE
Sbjct: 120 YIYIRGEFYNEYLVLKKALEEAYKEGLIGKNACKSGYDLDVFIHRGAGAYICGEETAQLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GL+GCPTT+ NVET+A+ P IL RG +WFAS G+ NN+GTK
Sbjct: 180 SIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILNRGGEWFASLGKPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEE+ IPL+ELI+++ GGVRGGWDNLLAVIPGGSSVPL+PK ICD
Sbjct: 240 VFCISGHVNNPCNVEEELGIPLRELIEKYAGGVRGGWDNLLAVIPGGSSVPLIPKSICDT 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L+ QSGLGTAAVIVM+KSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 300 IEMDFDSLRTAQSGLGTAAVIVMNKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
IM+R+ G+ K +EID L ++T QIEGHTICALGDAAAWP+QGLIRHFR ++ R
Sbjct: 360 IMKRMVAGDIKPDEIDKLLDLTTQIEGHTICALGDAAAWPIQGLIRHFRHVIKER 414
>gi|58584731|ref|YP_198304.1| NADH dehydrogenase I subunit F [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58419047|gb|AAW71062.1| NADH:ubiquinone oxidoreductase, NADH-binding, chain F [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 424
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 288/416 (69%), Positives = 346/416 (83%), Gaps = 1/416 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
+K++D+IFTNL G P LKGA KRG W +TK+L+ G++ I++EV+KSGLRGRGGAGF
Sbjct: 1 MKEQDKIFTNLSGKETPLLKGAKKRGSWQKTKELLDLGSEKIIDEVRKSGLRGRGGAGFS 60
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S +P+YLVVNADESEPGTCKDR+I+R++PHKLLEG L+A + AS
Sbjct: 61 TGLKWSFMPKNPSKEQPTYLVVNADESEPGTCKDRDILRYEPHKLLEGVLLASRAISASV 120
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L++A +EAY GL+GKNAC S YD +V IH GAGAYICGEETA L
Sbjct: 121 AYIYIRGEFYNEYLVLKQALEEAYKEGLIGKNACKSSYDLNVFIHRGAGAYICGEETAQL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ES+EGK+G PR+KPPFPA GL+GCPTT+ NVET+A+ P IL RG +WFAS G+ NN+GT
Sbjct: 181 ESIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILYRGGEWFASLGKPNNTGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FCVSGHVN PC VEEE+ IPL+ELI+ + GGVRGGWDNLLAVIPGGSSV L+PK ICD
Sbjct: 241 KIFCVSGHVNNPCNVEEELGIPLRELIEEYAGGVRGGWDNLLAVIPGGSSVSLIPKSICD 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ MD+D+L+A QSGLGTAAVIVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 301 IIKMDFDSLRAAQSGLGTAAVIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
IM+R+ GN K EID L ++T QIEG+TICALGDAAAWP+QGLIRHFR +E R
Sbjct: 361 RIMKRMVTGNIKHGEIDKLLDLTTQIEGNTICALGDAAAWPIQGLIRHFRHVIEER 416
>gi|402704034|ref|ZP_10852013.1| NADH dehydrogenase I subunit F [Rickettsia helvetica C9P9]
Length = 421
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 295/420 (70%), Positives = 349/420 (83%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + K GDW TK L+ KG D+I+ EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQGHDLKSSKKCGDWDDTKALLDKGRDFIIEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+G+NACGSG+D ++++H GAGAY+CGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGRNACGSGFDCNIYLHRGAGAYVCGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFAS G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVNKPC VEE M IPLKELI+++ GGVRGGWDNL A+IPGGSS+PLLPK +C +
Sbjct: 241 IFCISGHVNKPCNVEEAMGIPLKELIEKYAGGVRGGWDNLKAIIPGGSSMPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTTGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
IM RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK HA
Sbjct: 360 IMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEERIKSHA 419
>gi|383483496|ref|YP_005392409.1| NADH dehydrogenase I subunit F [Rickettsia parkeri str. Portsmouth]
gi|378935850|gb|AFC74350.1| NADH dehydrogenase I subunit F [Rickettsia parkeri str. Portsmouth]
Length = 421
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/420 (69%), Positives = 344/420 (81%), Gaps = 2/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK+ED+IFTNL+G LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+
Sbjct: 62 TGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNC 120
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLE
Sbjct: 121 YIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHV+KPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C +
Sbjct: 241 IFCISGHVHKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLC-E 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V MD+D+L+ SGLGT +IVMD+STD+V AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 300 VDMDFDSLRTAGSGLGTGGIIVMDQSTDIVYAIARLSKFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+M RL GN K EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK +
Sbjct: 360 VMMRLVKGNVKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSDS 419
>gi|99035131|ref|ZP_01314914.1| hypothetical protein Wendoof_01000244 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 417
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/415 (68%), Positives = 348/415 (83%), Gaps = 2/415 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IFTNL G P L+GA KRG W +TK+L+ G++ I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEQDKIFTNLNGKGTPLLEGAKKRGSWQKTKELLDLGSEKIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK + +YLVVNADESEPGTCKDR+I+R++PHKLLEG L+AG + AS A
Sbjct: 62 TGLKWSFMPK--NLPKAYLVVNADESEPGTCKDRDILRYEPHKLLEGILLAGKAISASVA 119
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L++A +EAY GL+GKNAC SGYD DV +H GAGAYICGEETA LE
Sbjct: 120 YIYIRGEFYNEYLVLKKALEEAYKEGLIGKNACKSGYDLDVFLHRGAGAYICGEETAQLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GL+GCPTT+ NVET+A+ P IL RG +WFAS G+ NN+GTK
Sbjct: 180 SIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILNRGGEWFASLGKPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEE+ IPL+ELI+++ GGVRGGWDNLLAVIPGGSSVPL+PK ICD
Sbjct: 240 VFCISGHVNNPCNVEEELGIPLRELIEKYAGGVRGGWDNLLAVIPGGSSVPLIPKSICDT 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L+ QSGLGTAAVIVM+KSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 300 IEMDFDSLRTAQSGLGTAAVIVMNKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
IM+R+ G+ K +EID L ++T QIEGHTICALGDAAAWP+QGLIRHFR ++ R
Sbjct: 360 IMKRMVAGDIKPDEIDKLLDLTTQIEGHTICALGDAAAWPIQGLIRHFRHVIKER 414
>gi|225631349|ref|ZP_03788019.1| NADH dehydrogenase I, F subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590954|gb|EEH12166.1| NADH dehydrogenase I, F subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 417
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/415 (68%), Positives = 346/415 (83%), Gaps = 2/415 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IFTNL G P L+GA KRG W +TK+L+ G++ I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEQDKIFTNLNGKGTPLLEGAKKRGSWQKTKELLDLGSEKIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK + +YLVVNADESEPGTCKDR+I+R++PHKLLEG L+AG + AS A
Sbjct: 62 TGLKWSFMPK--NLPKAYLVVNADESEPGTCKDRDILRYEPHKLLEGILLAGKAISASVA 119
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L++A +EAY L+GKNAC SGYD DV IH GAGAYICGEETA LE
Sbjct: 120 YIYIRGEFYNEYLVLKKALEEAYKENLIGKNACKSGYDLDVFIHRGAGAYICGEETAQLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GL+GCPTT+ NVET+A+ P IL RG +WFAS G+ NN+GTK
Sbjct: 180 SIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILNRGGEWFASLGKPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEE+ IPL+ELI+++ GGVRGGWDNLLAVIPGGSSVPL+PK ICD
Sbjct: 240 IFCISGHVNNPCNVEEELGIPLRELIEKYAGGVRGGWDNLLAVIPGGSSVPLIPKSICDT 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L+ QSGLGTAAVIVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 300 IEMDFDSLRTAQSGLGTAAVIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
IM+R+ G+ K +EID L ++T QIEGHTICALGDAAAWP+QG IRHFR ++ R
Sbjct: 360 IMKRMVAGDIKPDEIDKLLDLTTQIEGHTICALGDAAAWPIQGFIRHFRHVIKER 414
>gi|145475863|ref|XP_001423954.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391016|emb|CAK56556.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 295/417 (70%), Positives = 337/417 (80%), Gaps = 14/417 (3%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
P K + GGLKD+DRIFTN+Y DP+++GA+KRGDWHRTKD++ G DWI++E+KKSGL
Sbjct: 14 PQPKYYHGGLKDQDRIFTNVYRDGDPYIQGALKRGDWHRTKDILTMGQDWIIDEIKKSGL 73
Query: 109 RGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
RGRGGAGFPSGLK+ K ++L GTCKDREI+RHDPHKL+EG L
Sbjct: 74 RGRGGAGFPSGLKYLIHAKSQSRWKAFLF--------GTCKDREILRHDPHKLVEGALCV 125
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
G MRA AAYIY RGE+ E L++A EAY G LGKNACGSGYDFDV++H GAGAYI
Sbjct: 126 GFAMRARAAYIYCRGEFWVEANALQQAVDEAYKKGFLGKNACGSGYDFDVYVHSGAGAYI 185
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
CGEET L+ESLEGK GKPRLKPPFPANAGL+GCPTT V TILRRG +WFASF
Sbjct: 186 CGEETGLIESLEGKPGKPRLKPPFPANAGLWGCPTTFQFV------ATILRRGANWFASF 239
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
GR NN GTKLFC+SGHVN PCTVEEEMSIPLKELI+RHCGGVRGGWDNL +IPGGSSVP
Sbjct: 240 GRPNNRGTKLFCISGHVNNPCTVEEEMSIPLKELIERHCGGVRGGWDNLKCIIPGGSSVP 299
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
+LPK C+ VLMD+DAL+ V+SGLGTAAVIV+DKSTD++DAI RLS FYKHESCGQCTPC
Sbjct: 300 MLPKETCETVLMDFDALRDVRSGLGTAAVIVIDKSTDIIDAILRLSKFYKHESCGQCTPC 359
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
REGT WL ++ER+KVGNA EID L+E+T QIEGHTICALGDAAAWPVQGLIR +
Sbjct: 360 REGTSWLVDLLERMKVGNADFAEIDQLEELTYQIEGHTICALGDAAAWPVQGLIRTY 416
>gi|254780858|ref|YP_003065271.1| NADH dehydrogenase I subunit F [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040535|gb|ACT57331.1| NADH dehydrogenase I subunit F [Candidatus Liberibacter asiaticus
str. psy62]
Length = 425
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 287/419 (68%), Positives = 339/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+ L +M RG W ++ KG DWI+NEVK SGLRGRGGAGF
Sbjct: 2 LTDQDRIFTNLYGLQGKSLSDSMSRGHWDNVDKILEKGRDWIINEVKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPKV RP YLVVNADESEPGTCKDR+IMRH+PH L+EGC+IA + A A
Sbjct: 62 TGMKWSFMPKVCSDRPHYLVVNADESEPGTCKDRDIMRHEPHTLIEGCVIASFAIGAHCA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGE++ ER++L+ A E YA+GLLG N+ GYD D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEFIRERESLQAAVDECYASGLLGSNS-KLGYDVDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV PTILRRG W++ FGR+NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVVPTILRRGASWYSGFGRENNRGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCTVEE MSI ELI++HCGG+RGGWDNLLAVIPGGSSVP LP
Sbjct: 241 LFSISGHVNYPCTVEESMSITFDELIEKHCGGIRGGWDNLLAVIPGGSSVPCLPAGQMRG 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD LK + SGLGTAAVIVMD+STD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLKEMGSGLGTAAVIVMDRSTDIIKAIWRLSVFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MERL G A+ EID+L EV+K IEG TICALGDAAAWP+QGLI++FRP +E RI ++
Sbjct: 361 VMERLVKGIAQKREIDLLYEVSKNIEGRTICALGDAAAWPIQGLIKNFRPLIEERIDQY 419
>gi|443690197|gb|ELT92397.1| hypothetical protein CAPTEDRAFT_225471 [Capitella teleta]
Length = 457
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/429 (67%), Positives = 339/429 (79%), Gaps = 8/429 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
+KDEDRIFTNLYG HD LKGAM RGDW++TK+++LKG WI EVKKSGLRGRGGAGFP
Sbjct: 20 MKDEDRIFTNLYGRHDWKLKGAMSRGDWYKTKEIILKGPSWIQEEVKKSGLRGRGGAGFP 79
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A AA
Sbjct: 80 TGMKWSFMNKPDDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLIAGSSMGARAA 139
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE N++ A EAY AG LGKNACG+G+DFDV++H GAGAYICGEET+L+E
Sbjct: 140 YIYIRGEFYNEASNMQAAIHEAYQAGYLGKNACGTGFDFDVYLHRGAGAYICGEETSLIE 199
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT--ILRRGPDWFASFGRKNNSG 295
S+EGK GKPRLKPPFPA+ GL+GCPTTV NVET+A T + R G +N+
Sbjct: 200 SIEGKPGKPRLKPPFPADIGLFGCPTTVNNVETIAAPFTLWLFCRPSAVAVEIGSRNSVA 259
Query: 296 T------KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+LF +SG VN PCTVEE MSIPL+ELID H GGV GGWDNLL +IPGGSS P+
Sbjct: 260 LETLARRQLFNISGQVNNPCTVEETMSIPLRELIDIHAGGVIGGWDNLLGIIPGGSSTPV 319
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+PK +C DV+MD+D L ++ LGTAA+IVM+K +D++ IARL FYKHESCGQCTPCR
Sbjct: 320 IPKSVCADVMMDFDDLVRAETALGTAAIIVMNKQSDIIRCIARLIEFYKHESCGQCTPCR 379
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EG W+ IM R GNAK +EIDML E++KQIEGH+ICALGD AAWPVQGLIRHFRP +
Sbjct: 380 EGVSWMNQIMGRFMTGNAKADEIDMLYEISKQIEGHSICALGDGAAWPVQGLIRHFRPTI 439
Query: 470 ERRIKEHAE 478
E R+K A+
Sbjct: 440 EDRMKMFAD 448
>gi|402496584|ref|YP_006555844.1| NADH dehydrogenase I subunit F [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398649857|emb|CCF78027.1| NADH dehydrogenase I subunit F [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 433
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 289/416 (69%), Positives = 346/416 (83%), Gaps = 1/416 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IFTNL G P LK A KRG W +TK+++ G++ I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEQDKIFTNLNGKETPLLKDAKKRGSWQKTKEILDLGSEKIIDEVKKSGLRGRGGAGFF 61
Query: 118 SGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK S +P YLVVNADESEPGTCKDR I+R++PHKLLEG L AG + ASA
Sbjct: 62 TGLKWSFMPKNPSKEQPVYLVVNADESEPGTCKDRGILRYEPHKLLEGILFAGKAINASA 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L++A +EAY GL+G+NAC SGYD D+ IH GAGAYICGEETA L
Sbjct: 122 AYIYIRGEFYNEYLVLKKALEEAYKEGLIGENACKSGYDLDIFIHRGAGAYICGEETAQL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ES+EGK+G PR+KPPFPA+ GL+GCPTT+ NVET+A+ P ILRRG WF S G+ NN+GT
Sbjct: 182 ESIEGKKGFPRIKPPFPADIGLFGCPTTINNVETIAMVPDILRRGGGWFMSLGKPNNTGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+F +SGHVN PC VEEE+ IPL+ELI+R+ GGV+GGW+NLLAVIPGGSS+PL+PK ICD
Sbjct: 242 KIFSISGHVNNPCNVEEELGIPLRELIERYAGGVQGGWNNLLAVIPGGSSMPLIPKSICD 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ MD+D+L+AVQSGLGTAAVIVMDKSTDV+ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 302 TIEMDFDSLRAVQSGLGTAAVIVMDKSTDVIAAIERLSHFYMHESCGQCTPCREGTGWIW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
IM+R+ G K EID L ++T QIEGHTICA GDAAAWPVQGLIRHFR +E+R
Sbjct: 362 RIMKRMVTGEIKPGEIDKLLDLTTQIEGHTICAFGDAAAWPVQGLIRHFRHLIEKR 417
>gi|431805609|ref|YP_007232510.1| NADH-ubiquinone oxidoreductase subunit F [Liberibacter crescens
BT-1]
gi|430799584|gb|AGA64255.1| NADH-ubiquinone oxidoreductase chain F [Liberibacter crescens BT-1]
Length = 421
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 284/420 (67%), Positives = 341/420 (81%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LKG++ RG W TK ++ K DWI+NEVK SGLRGRGGAGF
Sbjct: 2 LSDQDRIFTNIYGLKDRTLKGSILRGHWDNTKQILEKNRDWIINEVKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK RP YLVVNADESEPGTCKDR+IMRHDPH L+EGC++ + +
Sbjct: 62 TGMKWSFMPKEVTDRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVMGAFAIGSHCV 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGE++ ER+ L+ A E Y AGLLG N+ GYD D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEFIREREALQAAVDECYDAGLLGNNS-KLGYDVDIVVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA+ GLYGCPTTV NVET+AV PTILRRG W++SFGR NNSGTK
Sbjct: 181 SLEGKKGQPRLKPPFPASVGLYGCPTTVNNVETIAVIPTILRRGAAWYSSFGRANNSGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCTVEE MSI ++LI+RHCGG+RGGWDNLLAVIPGGSSVP +P
Sbjct: 241 LFSISGHVNCPCTVEETMSISFEDLIERHCGGIRGGWDNLLAVIPGGSSVPCVPGEQMRK 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD L+ + S LGTAAVIVMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDGLRELGSALGTAAVIVMDKSTDIIKAIWRLSVFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ G+A+ EIDML +V+K IEGHTICALGDAAAWP+QGLI++FRP +E RI ++
Sbjct: 361 VLERMVKGSARKSEIDMLLDVSKNIEGHTICALGDAAAWPIQGLIKNFRPLIEERIDSYS 420
>gi|429768402|ref|ZP_19300560.1| NADH oxidoreductase, F subunit [Brevundimonas diminuta 470-4]
gi|429189183|gb|EKY30028.1| NADH oxidoreductase, F subunit [Brevundimonas diminuta 470-4]
Length = 437
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/424 (67%), Positives = 344/424 (81%), Gaps = 1/424 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG HD L+GA RG W+ TKD++ G DWI+N VK SGLRGRGGAG
Sbjct: 3 GILQDKDRIFTNLYGFHDWGLEGAKTRGAWNATKDMLDLGGDWIINNVKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
F +GLKWSFMPK RP YLV+NADESEP TCKDREIMRHDPH L+EG LIA M+A
Sbjct: 63 FSTGLKWSFMPKEVKDRPHYLVINADESEPATCKDREIMRHDPHLLIEGALIASFAMKAH 122
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A YIY+RGEY+ ER+ +E A ++AY A L+G + G+DF V+IH+GAGAYICGEETAL
Sbjct: 123 ACYIYLRGEYILERERMEAAVKQAYEARLIGDDNV-HGWDFHVYIHHGAGAYICGEETAL 181
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
LESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV TILRRG DWFASFGR NN+G
Sbjct: 182 LESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVGTILRRGADWFASFGRPNNAG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKL +SGHVN PC VEE MSIPL++LI+ H GGVRGGW+NL A+IPGG+S P++ +
Sbjct: 242 TKLMSLSGHVNTPCVVEEAMSIPLRQLIEDHGGGVRGGWENLKAIIPGGASCPVITREQA 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
+ LMD+D+++ +S LGTA V VMD+STD+V AIAR+SYF+KHESCGQCTPCREGTGW+
Sbjct: 302 EVALMDFDSMREHRSSLGTAGVTVMDQSTDIVKAIARISYFFKHESCGQCTPCREGTGWM 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
W ++ER+ +G+A EID+L +V Q+EGHTICALGDAAAWPVQGLIRHFR E+E RI
Sbjct: 362 WRVLERMAIGDADPSEIDLLLDVAGQVEGHTICALGDAAAWPVQGLIRHFRHEIEERIHT 421
Query: 476 HAER 479
+ R
Sbjct: 422 YRSR 425
>gi|300176713|emb|CBK24378.2| subunit NuoF (NDUFV1) [Blastocystis hominis]
Length = 503
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/420 (68%), Positives = 340/420 (80%), Gaps = 1/420 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H GGL D+DRIFTNLY +D + AM+RG W++TK+L+ G D I+ ++K SGLRGRGG
Sbjct: 62 HHGGLSDQDRIFTNLYSQYDWHIDSAMERGFWYKTKELLEMGPDQIIADIKASGLRGRGG 121
Query: 114 AGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
A FPSGLKWSFMPK S DGRP++LVVN DESEPGTCKDREI+R DPH L+EGCL+AG M
Sbjct: 122 AAFPSGLKWSFMPKASKDGRPNFLVVNCDESEPGTCKDREIIRKDPHALVEGCLVAGYAM 181
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
A AAYIYIRGE+ NE LE A EAY G LG+NACG+GY+FDV +H GAGAY+CGEE
Sbjct: 182 HARAAYIYIRGEFYNESIRLEEAIHEAYQKGFLGRNACGTGYNFDVFVHRGAGAYVCGEE 241
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
+A LESLEGKQGKPRLKPPFPANAGLYGCPTTVTN ETV+VSPTILRRGP+WFA FGRKN
Sbjct: 242 SAQLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNCETVSVSPTILRRGPEWFAGFGRKN 301
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
N+G KLF +SGHVN PC VEEEMSI L+EL+++H GGVRGGWDNL AVIPGG+S L K
Sbjct: 302 NAGVKLFAISGHVNNPCVVEEEMSISLRELLEKHAGGVRGGWDNLQAVIPGGASTRALNK 361
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
+CD LMDYD+L + +SGLG+AAVIVMDKSTD++ AI LS+FY HESCGQCTPCREG
Sbjct: 362 DMCDVALMDYDSLGSFKSGLGSAAVIVMDKSTDMMAAIRNLSHFYMHESCGQCTPCREGL 421
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
W++ IM R++ G + EIDML E+ QIE HTIC L DAA WP++GL+R ++ E+ R
Sbjct: 422 PWVYDIMCRMERGQLEEREIDMLMEIGTQIELHTICGLADAAIWPIEGLMRSWKKEILER 481
>gi|56416878|ref|YP_153952.1| NADH dehydrogenase I subunit F [Anaplasma marginale str. St.
Maries]
gi|222475243|ref|YP_002563659.1| NADH dehydrogenase I subunit F [Anaplasma marginale str. Florida]
gi|255003227|ref|ZP_05278191.1| NADH dehydrogenase I subunit F [Anaplasma marginale str. Puerto
Rico]
gi|56388110|gb|AAV86697.1| NADH dehydrogenase chain F [Anaplasma marginale str. St. Maries]
gi|222419380|gb|ACM49403.1| NADH dehydrogenase I chain F (nuoF) [Anaplasma marginale str.
Florida]
Length = 430
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/424 (67%), Positives = 341/424 (80%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
+K ED FTNL G P+L A KRG W TK ++ G D I+ EVK SGLRGRGGAGFP
Sbjct: 1 MKSEDAAFTNLAGRESPYLGAAKKRGAWDGTKRILELGPDKIIQEVKDSGLRGRGGAGFP 60
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G KWSFMPK +GRP+YLV+NADESEPGTCKDR+I+R++PHK++EG LIAG M +A
Sbjct: 61 TGTKWSFMPKTRPEGRPAYLVINADESEPGTCKDRDIIRYEPHKIIEGILIAGFAMGVTA 120
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L +A EAY GL+GKNAC SGYD D+ IH GAGAYICGEE+A L
Sbjct: 121 AYIYIRGEFYNEYLVLSQALDEAYKHGLVGKNACSSGYDLDIFIHRGAGAYICGEESAQL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG++G PRLKPPFPA GLYGCPTT+ NVETVAV I+RRG WF+S GR NN+GT
Sbjct: 181 ESLEGRKGMPRLKPPFPAAVGLYGCPTTINNVETVAVVADIMRRGSKWFSSLGRPNNTGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVNKPC VEEE+ IP++ELI+++ GGV GGWDNLLAVIPGGSSVP+LPK +CD
Sbjct: 241 KVFCISGHVNKPCNVEEELGIPMRELIEKYAGGVIGGWDNLLAVIPGGSSVPMLPKSVCD 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
DVLMD+D+LKAVQSGLGTA +IVMDKSTD+V+AI R+S FY HESCGQCTPCREGTGW+W
Sbjct: 301 DVLMDFDSLKAVQSGLGTAGLIVMDKSTDLVEAIERISRFYMHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+++ G AK EID L +V QIEGHTICAL DAA WP+QGL RHFR +E RI
Sbjct: 361 RMMKKMVDGTAKDGEIDKLLDVASQIEGHTICALADAAVWPIQGLFRHFRHVVEDRIGNK 420
Query: 477 AERE 480
+++
Sbjct: 421 GKKK 424
>gi|330813987|ref|YP_004358226.1| NADH-ubiquinone oxidoreductase subunit F [Candidatus Pelagibacter
sp. IMCC9063]
gi|327487082|gb|AEA81487.1| NADH-ubiquinone oxidoreductase chain F [Candidatus Pelagibacter sp.
IMCC9063]
Length = 430
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 282/416 (67%), Positives = 340/416 (81%), Gaps = 1/416 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D++RIF NLYG L A RGDW TK+++ KG DWI+ EVKKS LRGRGGAGFP
Sbjct: 2 LEDKNRIFKNLYGDESFSLPAAEVRGDWKDTKEIISKGKDWIIEEVKKSELRGRGGAGFP 61
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSF PK V +GRP YLV+NADESEPGTCKDR+I+R++PHKL+EGCLIA + A+
Sbjct: 62 TGVKWSFAPKEVKEGRPHYLVINADESEPGTCKDRDILRYEPHKLIEGCLIAAYAVSANI 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
Y+YIRGEYVNE K L+ A EAY G LGKNA G+G+D D+ IHYGAGAYICGEETALL
Sbjct: 122 CYVYIRGEYVNEGKVLQEAINEAYEKGYLGKNAAGTGWDLDIFIHYGAGAYICGEETALL 181
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG +G+PRLKPPFPA GLYGCPT V NVETVAV PTIL+RG +WFASFGR N GT
Sbjct: 182 ESLEGNKGQPRLKPPFPALIGLYGCPTIVNNVETVAVVPTILKRGSEWFASFGRVKNRGT 241
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SG+VN PC VEEEM IPLK LI++H GGV GGWDNL AVIPGGSS+PLLPK+IC+
Sbjct: 242 KIFCISGNVNNPCNVEEEMGIPLKVLIEKHAGGVIGGWDNLQAVIPGGSSMPLLPKNICE 301
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
+ MD+DAL +SGLGTA ++V+DKS D+V + R++ FYKHESCGQCTPCREGTGW+W
Sbjct: 302 TINMDFDALIEAKSGLGTAGIVVIDKSQDIVKCMTRIARFYKHESCGQCTPCREGTGWMW 361
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
++ER+ G + + EIDML +VTKQIEGHTICA G+ ++WPVQGL+RHFR E+E +
Sbjct: 362 RMLERIGRGESNISEIDMLMDVTKQIEGHTICAFGEGSSWPVQGLLRHFRKEMEAK 417
>gi|300123837|emb|CBK25108.2| subunit NuoF (NDUFV1) [Blastocystis hominis]
Length = 490
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/422 (68%), Positives = 341/422 (80%), Gaps = 1/422 (0%)
Query: 54 HFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGG 113
H GGL D+DRIFTNLY +D + AM+RG W++TK+L+ G D I+ ++K SGLRGRGG
Sbjct: 49 HHGGLSDQDRIFTNLYSQYDWHIDSAMERGFWYKTKELLEMGPDQIIADIKASGLRGRGG 108
Query: 114 AGFPSGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
A FPSGLKWSFMPK S DGRP++LVVN DESEPGTCKDREI+R DPH L+EGCL+AG M
Sbjct: 109 AAFPSGLKWSFMPKASKDGRPNFLVVNCDESEPGTCKDREIIRKDPHALVEGCLVAGYAM 168
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
A AAYIYIRGE+ NE LE A EAY G LG+NACG+GY+FDV +H GAGAY+CGEE
Sbjct: 169 HARAAYIYIRGEFYNESIRLEEAIHEAYQKGFLGRNACGTGYNFDVFVHRGAGAYVCGEE 228
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
+A LESLEGKQGKPRLKPPFPANAGLYGCPTTVTN ETV+VSPTILRRGP+WFA FGRKN
Sbjct: 229 SAQLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNCETVSVSPTILRRGPEWFAGFGRKN 288
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
N+G KLF +SGHVN PC VEEEMSI L+EL+++H GGVRGGWDNL AVIPGG+S L K
Sbjct: 289 NAGVKLFAISGHVNNPCVVEEEMSISLRELLEKHAGGVRGGWDNLQAVIPGGASTRALNK 348
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
+CD LMDYD+L + +SGLG+AAVIVMDKSTD++ AI LS+FY HESCGQCTPCREG
Sbjct: 349 DMCDVALMDYDSLGSFKSGLGSAAVIVMDKSTDMMAAIRNLSHFYMHESCGQCTPCREGL 408
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
W++ IM R++ G + EIDML E+ QIE HTIC L DAA WP++GL+R ++ E+ R
Sbjct: 409 PWVYDIMCRMERGQLEEREIDMLMEIGTQIELHTICGLADAAIWPIEGLMRSWKKEILER 468
Query: 473 IK 474
+
Sbjct: 469 SR 470
>gi|88607132|ref|YP_505037.1| NADH dehydrogenase I subunit F [Anaplasma phagocytophilum HZ]
gi|88598195|gb|ABD43665.1| NADH dehydrogenase I, F subunit [Anaplasma phagocytophilum HZ]
Length = 426
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 282/425 (66%), Positives = 341/425 (80%), Gaps = 1/425 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
++DED IFTNL G P+L A RG W TK+L+ G D I+ E+K SGLRGRGGAGFP
Sbjct: 1 MRDEDSIFTNLSGKESPYLAAAKSRGTWFNTKELLALGRDKIIQEIKDSGLRGRGGAGFP 60
Query: 118 SGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLKWSFMPK + +G +YLVVNADESEPGTCKDR+I+R+DPHK+LEG LIAG M +A
Sbjct: 61 TGLKWSFMPKALPEGSSAYLVVNADESEPGTCKDRDIIRYDPHKILEGILIAGFAMGVTA 120
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L +A QEAYA GLLG+NACGSGY+ +V IH GAGAYICGEE+A +
Sbjct: 121 AYIYIRGEFYNEYTVLFKALQEAYADGLLGENACGSGYNLNVFIHRGAGAYICGEESAQI 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ES+EG++G PRLKPPFPA GLYG PTTV NVET+AV ILRRG WF+S G NN+GT
Sbjct: 181 ESIEGRKGMPRLKPPFPAAVGLYGSPTTVNNVETIAVVGDILRRGSGWFSSLGIPNNTGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVN PC VEEE+ IP++ELI+++ GGV GGWDNLLAVIPGGSSVP+LPKHICD
Sbjct: 241 KVFCISGHVNNPCNVEEELGIPMRELIEKYAGGVIGGWDNLLAVIPGGSSVPMLPKHICD 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D+ MD+D+L+A +SGLGTA +IVMDKSTD+++AI R+S FY HESCGQC+PCREGTGW+W
Sbjct: 301 DITMDFDSLRAAKSGLGTAGLIVMDKSTDLIEAIERISSFYMHESCGQCSPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M ++ G A+ EID L +V QIEGHTICAL DAA WP+QGL RHFR +E R++
Sbjct: 361 RMMRKMLDGTAEESEIDKLLDVASQIEGHTICALADAAVWPIQGLFRHFRSVVEERLRSS 420
Query: 477 AEREL 481
R L
Sbjct: 421 KARRL 425
>gi|225630643|ref|YP_002727434.1| NADH dehydrogenase I, F subunit [Wolbachia sp. wRi]
gi|225592624|gb|ACN95643.1| NADH dehydrogenase I, F subunit [Wolbachia sp. wRi]
Length = 417
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 284/415 (68%), Positives = 344/415 (82%), Gaps = 2/415 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IFTNL G P L+GA KRG W +TK+L+ G++ I++EVKKSGLRGRGGAGF
Sbjct: 2 LKEQDKIFTNLNGKETPLLEGAKKRGGWQKTKELLDLGSEKIIDEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK + +YLVVNADESEPGTCKDR+I+R++PHKLLEG L+A + AS A
Sbjct: 62 TGLKWSFMPK--NLPKAYLVVNADESEPGTCKDRDILRYEPHKLLEGILLASRAISASVA 119
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L++A +EAY L+GKNAC SGYD DV IH GAGAYICGEETA LE
Sbjct: 120 YIYIRGEFYNEYLVLKKALEEAYKENLIGKNACKSGYDLDVFIHRGAGAYICGEETAQLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GL+GCPTT+ NVET+A+ P IL RG +WF S G+ NN+GTK
Sbjct: 180 SIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILNRGGEWFTSLGKPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEE+ IPL+ELI+++ GGVRGGWDNLLAVIPGGSS PL+PK ICD
Sbjct: 240 VFCISGHVNNPCNVEEELGIPLRELIEKYAGGVRGGWDNLLAVIPGGSSAPLIPKSICDT 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L+ QSGLGTAAVIVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 300 IEMDFDSLRTAQSGLGTAAVIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
IM+R+ G+ K +EID L ++T QIEGHTICALGDAAAWP+QGLIRHFR ++ R
Sbjct: 360 IMKRMVAGDIKPDEIDKLLDLTTQIEGHTICALGDAAAWPIQGLIRHFRHVIKER 414
>gi|269958707|ref|YP_003328494.1| NADH dehydrogenase subunit F [Anaplasma centrale str. Israel]
gi|269848536|gb|ACZ49180.1| NADH dehydrogenase subunit F [Anaplasma centrale str. Israel]
Length = 430
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/424 (67%), Positives = 342/424 (80%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
+K ED +FTNL G P+L+ A RG W TK ++ G D I+ EVK SGLRGRGGAGFP
Sbjct: 1 MKSEDAVFTNLAGRECPYLEAARARGAWDGTKRILELGPDKIIQEVKDSGLRGRGGAGFP 60
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KW FMPK +GRP+YLV+NADESEPGTCKDR+I+R++PHK++EG LIAG M +A
Sbjct: 61 TGVKWGFMPKARPEGRPAYLVINADESEPGTCKDRDIIRYEPHKIIEGILIAGFAMGVTA 120
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AY+YIRGE+ NE L RA EAY GL+GKNAC SGYD D+ IH GAGAYICGEE+A L
Sbjct: 121 AYVYIRGEFYNEYLVLSRALDEAYKHGLVGKNACSSGYDLDIFIHRGAGAYICGEESAQL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG++G PRLKPPFPA GLYGCPTTV N+ETVAV I+RRG WFAS G+ NN+GT
Sbjct: 181 ESLEGRKGMPRLKPPFPAAVGLYGCPTTVNNIETVAVVGDIMRRGSQWFASLGKPNNTGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVNKPC VEEE+ IP++ELI+++ GGV GGWDNLLAVIPGGSSVP+LPK ICD
Sbjct: 241 KVFCISGHVNKPCNVEEELGIPMRELIEKYAGGVVGGWDNLLAVIPGGSSVPMLPKSICD 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
DVLMD+D+LKAVQSGLGTA +IVMDKSTD+V+AI R+S FY HESCGQCTPCREGTGW+W
Sbjct: 301 DVLMDFDSLKAVQSGLGTAGLIVMDKSTDLVEAIERISRFYMHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+++ G AK EID L +V QIEGHTICAL DAA WP+QGL RHFR +E RI
Sbjct: 361 RMMKKMVDGTAKDGEIDKLLDVASQIEGHTICALADAAVWPIQGLFRHFRHVVEDRIGNK 420
Query: 477 AERE 480
+++
Sbjct: 421 GKKK 424
>gi|373450461|ref|ZP_09542451.1| NADH-quinone oxidoreductase chain F [Wolbachia pipientis wAlbB]
gi|371932329|emb|CCE77460.1| NADH-quinone oxidoreductase chain F [Wolbachia pipientis wAlbB]
Length = 417
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/416 (68%), Positives = 342/416 (82%), Gaps = 2/416 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IFTNL G P L+GA KRG W +TK L+ G++ I+ EVKKSGLRGRGGAGF
Sbjct: 2 LKEQDKIFTNLNGKETPLLEGAKKRGSWRKTKKLLDLGSEKIIEEVKKSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK + +YLVVNADESEPGTCKDR+I+R++PHKLLEG L+AG + AS A
Sbjct: 62 TGLKWSFMPK--NPSKAYLVVNADESEPGTCKDRDILRYEPHKLLEGILLAGRAISASVA 119
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L++A +EAY L+GKNAC SGYD DV IH GAGAYICGEETA LE
Sbjct: 120 YIYIRGEFYNEYLVLKKALEEAYKENLIGKNACKSGYDLDVFIHRGAGAYICGEETAQLE 179
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GL+G PTT+ NVET+++ P IL RG +WFAS G+ NN+GTK
Sbjct: 180 SIEGKKGFPRMKPPFPAGVGLFGYPTTINNVETISMVPDILNRGGEWFASLGKPNNTGTK 239
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SG+VN PC VEEE+ I L ELI+++ GGVRGGWDNLLAVIPGGSSVPL+PK ICD
Sbjct: 240 VFCISGNVNNPCNVEEELGISLHELIEKYAGGVRGGWDNLLAVIPGGSSVPLIPKSICDT 299
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L+A QSGLGTAA+IVMDKSTD++ AI RLS+FY HESCGQCTPCREGTGW+W
Sbjct: 300 IEMDFDSLRAAQSGLGTAAIIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWR 359
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
IM R+ GN K E+D L ++T QIEGHTICALGDAAAWPVQGLIRHFR +E RI
Sbjct: 360 IMRRMVAGNIKPGEVDKLLDLTTQIEGHTICALGDAAAWPVQGLIRHFRHIIEERI 415
>gi|399090333|ref|ZP_10754034.1| NADH-quinone oxidoreductase, F subunit [Caulobacter sp. AP07]
gi|398027962|gb|EJL21488.1| NADH-quinone oxidoreductase, F subunit [Caulobacter sp. AP07]
Length = 439
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 303/422 (71%), Positives = 354/422 (83%), Gaps = 2/422 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG+HD L+GA KRG W+ TKD++ G DWI++ +K SGLRGRGGAG
Sbjct: 3 GILEDKDRIFTNLYGLHDWGLEGAKKRGCWNGTKDILDAGRDWIIDNMKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
F +GLKWSFMPK V DGRP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 63 FGTGLKWSFMPKEVKDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASRAMLA 122
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
+A YIYIRGEYV ER+ LE A ++AY A L+GKN G+DFD+++H+GAGAYICGEETA
Sbjct: 123 NACYIYIRGEYVREREVLEEAIKQAYDAKLIGKNNI-HGWDFDLYVHHGAGAYICGEETA 181
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGK+G+PRLKPPFPA AGLYG PTTV NVE++AV+ TILRRG WF FGR NN+
Sbjct: 182 LLESLEGKKGQPRLKPPFPAGAGLYGMPTTVNNVESIAVAGTILRRGAAWFTGFGRPNNA 241
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFCVSGHVN PC VEE MSIP ++LI+ HCGGVRGGW NL AVIPGG+SVP++P
Sbjct: 242 GTKLFCVSGHVNLPCNVEEAMSIPFRQLIEDHCGGVRGGWGNLKAVIPGGASVPMIPAEQ 301
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C+D+ MD+DAL+ ++SGLGTAAV+VMDK TD+V AIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 302 CEDLPMDFDALRNLKSGLGTAAVMVMDKDTDLVRAIARLSYFYKHESCGQCTPCREGTGW 361
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+W +MER+ G A +EID L +VT Q+EGHTICALGDAAAWP+QGL RHFR E+E RI
Sbjct: 362 MWRVMERMATGEADPKEIDTLLDVTTQVEGHTICALGDAAAWPIQGLFRHFRHEVEDRIA 421
Query: 475 EH 476
+
Sbjct: 422 SY 423
>gi|329889336|ref|ZP_08267679.1| NADH oxidoreductase quinone, F subunit [Brevundimonas diminuta ATCC
11568]
gi|328844637|gb|EGF94201.1| NADH oxidoreductase quinone, F subunit [Brevundimonas diminuta ATCC
11568]
Length = 437
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 284/424 (66%), Positives = 343/424 (80%), Gaps = 1/424 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG HD L+GA KRG W+ TKD++ G DWI+ VK SGLRGRGGAG
Sbjct: 3 GILQDKDRIFTNLYGFHDWGLEGAKKRGAWNATKDMLDLGRDWIIANVKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
F +GLKWSFMPK RP YLV+NADESEP TCKDREIMRHDP L+EG LIA M+A
Sbjct: 63 FSTGLKWSFMPKEVKDRPHYLVINADESEPATCKDREIMRHDPQLLIEGALIASFAMQAH 122
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A YIY+RGEY+ ER+ +E A ++AY A L+G + G+DF V+IH+GAGAYICGEETAL
Sbjct: 123 ACYIYLRGEYILERERMEAAVKQAYEAKLIGDDNV-HGWDFHVYIHHGAGAYICGEETAL 181
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
LESLEGK+G+PRLKPPFPA AGLYGCPTTV NVE++AV TILRRG DWFA FGR NN+G
Sbjct: 182 LESLEGKKGQPRLKPPFPAGAGLYGCPTTVNNVESIAVVGTILRRGADWFAGFGRPNNTG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKL +SGHVN PC VEE MSIPL++LI+ H GGVRGGW+NL A+IPGG+S P++ +
Sbjct: 242 TKLMSLSGHVNTPCVVEEAMSIPLRQLIEDHGGGVRGGWENLKAIIPGGASCPVITREQA 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
+ LMD+D+++ ++S LGTA V VMD+STD+V AIAR+SYF+KHESCGQCTPCREGTGW+
Sbjct: 302 EVALMDFDSMREMRSSLGTAGVTVMDQSTDIVKAIARISYFFKHESCGQCTPCREGTGWM 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
W ++ER+ +G+A EID+L +V Q+EGHTICALGDAAAWPVQGLIRHFR E+E RI
Sbjct: 362 WRVLERMAIGDADPSEIDLLLDVAGQVEGHTICALGDAAAWPVQGLIRHFRHEIEERIHT 421
Query: 476 HAER 479
+ R
Sbjct: 422 YRSR 425
>gi|406989826|gb|EKE09544.1| hypothetical protein ACD_16C00139G0012 [uncultured bacterium]
Length = 423
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/418 (68%), Positives = 336/418 (80%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK D IFTNLYG+HD LKGA RGDW +TK L+ KG +WI+ EV SGLRGRGGAGF
Sbjct: 2 LKASDHIFTNLYGVHDWRLKGARARGDWDKTKALISKGREWIIQEVCASGLRGRGGAGFL 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G KW+FMP + P YL+VNADESEPGTCKDR+I+R +PHKL+EG L+ V + A
Sbjct: 62 TGRKWAFMPPDDEKTPRYLIVNADESEPGTCKDRDILRFEPHKLIEGALLTAVAIGAHVG 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
Y+YIRGE+ E +++ A EAY AGLLGKNA SG+DFD+++H GAGAYICGEETALLE
Sbjct: 122 YVYIRGEFYEEANHVDAAITEAYKAGLLGKNAAKSGWDFDLYVHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEG++G PRLKPPFPA GLYGCPT V NVET+AV P ILRRG WFA G NN+GTK
Sbjct: 182 SLEGRKGMPRLKPPFPAIVGLYGCPTIVNNVETIAVIPAILRRGGAWFAGIGTPNNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
++C+SGHVN PC VEE M IPLKELI+++ GGVRGGWDNLLAVIPGGSSVPL+PK +C+
Sbjct: 242 IYCISGHVNTPCNVEEAMGIPLKELIEKYGGGVRGGWDNLLAVIPGGSSVPLIPKDVCEK 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMD+ +L V+SGLGT VIVMDKSTD+V AIARLS FY HESCGQCTPCREGTGW+W
Sbjct: 302 VLMDFTSLAEVKSGLGTGGVIVMDKSTDIVRAIARLSKFYMHESCGQCTPCREGTGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
++ERL G ++ID L+EVT +IEGH IC LGDAAAWPVQGLIRHFRPELERR+ +
Sbjct: 362 MLERLADGIGTRDDIDRLEEVTYEIEGHAICGLGDAAAWPVQGLIRHFRPELERRLTK 419
>gi|426401085|ref|YP_007020057.1| NADH oxidoreductase (quinone), F subunit [Candidatus
Endolissoclinum patella L2]
gi|425857753|gb|AFX98789.1| NADH oxidoreductase (quinone), F subunit [Candidatus
Endolissoclinum patella L2]
Length = 430
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/416 (70%), Positives = 349/416 (83%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYG + GA +RGDW T +++ + I++ VK SGLRGRGG GF
Sbjct: 2 LKDKDRIFTNLYGWFRSDIVGARERGDWSNTTEILKMSQEKIIDVVKSSGLRGRGGGGFL 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK RP YLVVNADESEPGTCKDREI+RHDPHKL+EGCLI G +RAS A
Sbjct: 62 TGLKWSFMPKEVKERPHYLVVNADESEPGTCKDREIVRHDPHKLIEGCLIGGFAIRASTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGE+ NE L++A EAY AGL+GKNACGSGYDF+V +H GAGAYICGEETALLE
Sbjct: 122 FIYLRGEFYNEALILQKAIDEAYDAGLIGKNACGSGYDFNVILHRGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA+ GLYGCPTTV NVE++AV PTILRRG WFAS GR N G K
Sbjct: 182 SLEGKKGQPRLKPPFPASIGLYGCPTTVNNVESIAVIPTILRRGAGWFASIGRPKNYGPK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+F +SGHVN PC VEEE+ +PLKELI++H GGV GGWDNLLAVIPGGSSVPLLPK CD+
Sbjct: 242 IFSISGHVNNPCNVEEELGVPLKELINKHAGGVIGGWDNLLAVIPGGSSVPLLPKSTCDE 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+LMD+D+L+ V S LGTAAVIVM+K TDV+ AIARLS FYKHESCGQCTPCREGT W+
Sbjct: 302 ILMDFDSLREVHSALGTAAVIVMNKQTDVIKAIARLSAFYKHESCGQCTPCREGTAWMSR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+M+R+ G+A +EEID+L++VT+Q+EGHTICALGDAAAWP+QG+IR+FRPE+ERRI
Sbjct: 362 VMQRMVRGDADIEEIDILEDVTRQVEGHTICALGDAAAWPIQGMIRNFRPEMERRI 417
>gi|255004355|ref|ZP_05279156.1| NADH dehydrogenase I subunit F [Anaplasma marginale str. Virginia]
Length = 430
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/424 (67%), Positives = 339/424 (79%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
+K ED FTNL G P+L A KRG W TK ++ G D I+ EVK SGLRGRGGAGFP
Sbjct: 1 MKSEDAAFTNLAGRESPYLGAAKKRGAWDGTKRILELGPDKIIQEVKDSGLRGRGGAGFP 60
Query: 118 SGLKWSFMPKVS-DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G KWSFMPK +GRP+YLV+NADESEPGTCKDR+I+R++PHK++EG LIAG M +A
Sbjct: 61 TGTKWSFMPKTRPEGRPAYLVINADESEPGTCKDRDIIRYEPHKIIEGILIAGFAMGVTA 120
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIYIRGE+ NE L +A EAY GL+GKNAC SGYD D+ IH GAGAYICGEE+A L
Sbjct: 121 AYIYIRGEFYNEYLVLSQALDEAYKHGLVGKNACSSGYDLDIFIHRGAGAYICGEESAQL 180
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEG++G PRLKPPFPA GLYGCPTT+ NVETVAV I+RRG WF+S GR NN+GT
Sbjct: 181 ESLEGRKGMPRLKPPFPAAVGLYGCPTTINNVETVAVVADIMRRGSKWFSSLGRPNNTGT 240
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVNKPC VEEE+ IP++ELI+++ GGV GGWDNLLAVIPGGSSVP+LPK +CD
Sbjct: 241 KVFCISGHVNKPCNVEEELGIPMRELIEKYAGGVIGGWDNLLAVIPGGSSVPMLPKSVCD 300
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
DVLMD+D+LKAVQSGLGTA +IVMDKSTD+V+AI R+S FY HESCGQCTPCREGTGW+W
Sbjct: 301 DVLMDFDSLKAVQSGLGTAGLIVMDKSTDLVEAIERISRFYMHESCGQCTPCREGTGWMW 360
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M++ N K EID L +V QIEGHTICAL DAA WP+QGL RHFR +E RI
Sbjct: 361 RMMKKNGRWNGKRWEIDKLLDVASQIEGHTICALADAAVWPIQGLFRHFRHVVEDRIGNK 420
Query: 477 AERE 480
+++
Sbjct: 421 GKKK 424
>gi|167646790|ref|YP_001684453.1| NADH dehydrogenase subunit I F [Caulobacter sp. K31]
gi|167349220|gb|ABZ71955.1| NADH-quinone oxidoreductase, F subunit [Caulobacter sp. K31]
Length = 439
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 303/422 (71%), Positives = 353/422 (83%), Gaps = 2/422 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L+D+DRIFTNLYG+ D L+GA KRG W+ TKD++ G DWI++ +K SGLRGRGGAG
Sbjct: 3 GILEDKDRIFTNLYGLQDWGLEGAKKRGCWNGTKDILDAGRDWIIDNMKNSGLRGRGGAG 62
Query: 116 FPSGLKWSFMPK-VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
F +GLKWSFMPK V DGRP YLVVNADESEPGTCKDREIMRHDPH L+EGCLIA M A
Sbjct: 63 FGTGLKWSFMPKEVKDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASRAMLA 122
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
A YIYIRGEYV ER+ LE A ++AY A L+GKN G+DFD+++H+GAGAYICGEETA
Sbjct: 123 HACYIYIRGEYVREREVLEAAIKQAYEAKLIGKNNV-HGWDFDLYVHHGAGAYICGEETA 181
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGK+G+PRLKPPFPA AGLYG PTTV NVE++AV+ TILRRG WFA FGR NN+
Sbjct: 182 LLESLEGKKGQPRLKPPFPAGAGLYGMPTTVNNVESIAVAGTILRRGAAWFAGFGRPNNT 241
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTKLFCVSGHVN PC VEE MSIP ++L++ HCGG+RGGW NL AVIPGGSSVP++P
Sbjct: 242 GTKLFCVSGHVNLPCNVEEAMSIPFRQLMEDHCGGIRGGWGNLKAVIPGGSSVPMIPAEQ 301
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
C+D+ MD+DAL+ ++SGLGTAAVIVMDK TD+V AIARLSYFYKHESCGQCTPCREGTGW
Sbjct: 302 CEDLPMDFDALRNLRSGLGTAAVIVMDKDTDLVRAIARLSYFYKHESCGQCTPCREGTGW 361
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+W +MER+ G A +EID L +VT Q+EGHTICALGDAAAWP+QGL RHFR E+E RI
Sbjct: 362 MWRVMERMATGEADPKEIDTLLDVTTQVEGHTICALGDAAAWPIQGLFRHFRHEVEDRIA 421
Query: 475 EH 476
+
Sbjct: 422 SY 423
>gi|401885505|gb|EJT49619.1| hypothetical protein A1Q1_01248 [Trichosporon asahii var. asahii
CBS 2479]
Length = 501
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 294/452 (65%), Positives = 351/452 (77%), Gaps = 20/452 (4%)
Query: 28 RSFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
R+F++ A +TP P H+GGLKD+DR ++ D +L G D
Sbjct: 28 RTFASSSACNLATPADSTATP---VRHYGGLKDQDR---DILLKGDTWLLGTESSAD--- 78
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESE 144
+ I+N +K+SGLRGRGGAGFPSGLKWSFM K D RP YLVVNADE E
Sbjct: 79 --------SAGIINTIKESGLRGRGGAGFPSGLKWSFMNKPGWEKDPRPRYLVVNADEGE 130
Query: 145 PGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGL 204
PGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE++ E +++A EAYAAG
Sbjct: 131 PGTCKDREIMRGDPHKLVEGCLVAGRAMNANAAYIYIRGEFIEEANAVQKAIDEAYAAGY 190
Query: 205 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTT 264
LGK+ACGSGY FDV++H GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GCP+T
Sbjct: 191 LGKDACGSGYPFDVYVHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPST 250
Query: 265 VTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELID 324
V NVETVAV+PTI RRG WFASFGR+ NSGTKLFCVSGHVN PC VEEEMSIPLKEL++
Sbjct: 251 VANVETVAVAPTICRRGGSWFASFGRERNSGTKLFCVSGHVNNPCVVEEEMSIPLKELLE 310
Query: 325 RHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKST 384
+HCGG+RGGWDNL +IPGG SVP++ IC VLMDYD LK + LGT AVIVMD+ST
Sbjct: 311 KHCGGIRGGWDNLKGIIPGGCSVPVIKPDICSTVLMDYDDLKDNGTSLGTGAVIVMDQST 370
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
D+++AIAR S FYKHESCGQCTPCREGT W+ +M+RL G A+ EID + E+TKQ+EG
Sbjct: 371 DMINAIARFSKFYKHESCGQCTPCREGTTWMLNMMDRLVSGRAQNREIDQIYELTKQVEG 430
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
HTICALGDAAAWP+QGL+++FRPE+E+RI E+
Sbjct: 431 HTICALGDAAAWPIQGLLKNFRPEVEQRIAEY 462
>gi|315122721|ref|YP_004063210.1| NADH dehydrogenase I subunit F [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496123|gb|ADR52722.1| NADH dehydrogenase I subunit F [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 424
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 286/419 (68%), Positives = 340/419 (81%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTNLYG+ L +M RG W T +++ KG DWI++EVK SGLRGRGGAGF
Sbjct: 2 LKDQDRIFTNLYGLKGKSLDESMARGHWDGTDNILGKGRDWIISEVKASGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK RP YLVVNADESEPGTCKDR+IMRH+PH L+EGC+IA + A
Sbjct: 62 TGMKWSFMPKTCSDRPHYLVVNADESEPGTCKDRDIMRHEPHVLIEGCVIASFAIGAHCV 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGE++ ER++L+ A E YA GLLG+N+ GYD D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEFIRERESLQTAVDECYARGLLGRNS-KLGYDVDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PRLKPPFPAN GLYGCPTTV NVE++AV PTILRRG W++SFGR+NN GTK
Sbjct: 181 SLEGKKGLPRLKPPFPANMGLYGCPTTVNNVESIAVVPTILRRGASWYSSFGRENNRGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCTVEE MSI ELI++HCGG+RGGWDNLLAVIPGGSSVP L
Sbjct: 241 LFSISGHVNYPCTVEESMSITFDELIEKHCGGIRGGWDNLLAVIPGGSSVPCLTGDQMRG 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MDYD+LKA+ SGLGTAAVIVMD+STD++ AI RLS FYKHESCGQCTPCREGTGW+
Sbjct: 301 AIMDYDSLKAMGSGLGTAAVIVMDRSTDIIRAIWRLSVFYKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+MER+ G A+ EIDML EV+K IEG TICALGDAAAWP+QGLI++FR +E RI ++
Sbjct: 361 LMERMVRGVAQKHEIDMLFEVSKNIEGRTICALGDAAAWPIQGLIKNFRHVMEERIDQY 419
>gi|423715498|ref|ZP_17689722.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella elizabethae
F9251]
gi|395429625|gb|EJF95686.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella elizabethae
F9251]
Length = 435
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 283/419 (67%), Positives = 338/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W+ K+++ KG DWI+ EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMLRGHWNGLKEIIDKGRDWIIEEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC IA M A+ A
Sbjct: 62 TGMKWSFMPKQNDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCAIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYEAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + I +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGISFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDKSTD++ AI R+S F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGVIVMDKSTDIIKAIWRISAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQIEGHTICALGDAAAWPVQGLIR+FRPE+ERRI E+
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQIEGHTICALGDAAAWPVQGLIRNFRPEIERRIDEY 419
>gi|395791020|ref|ZP_10470479.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella alsatica IBS
382]
gi|395409316|gb|EJF75915.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella alsatica IBS
382]
Length = 435
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 282/419 (67%), Positives = 338/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+ D LK AM RG W K ++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LTDKDRIFTNLYGLKDKSLKSAMLRGHWDGIKAIINKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EG +IA M A+ A
Sbjct: 62 TGLKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHALIEGSVIAAFAMGANIA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYDAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVET+AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVETIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCTVEE + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMISGHVNAPCTVEEALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ + S GT VIVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGIRDIGSSFGTGGVIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ER+ G A+ EID+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FRPE+ERRI +
Sbjct: 361 LLERMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRPEIERRIDAY 419
>gi|395778245|ref|ZP_10458757.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella elizabethae
Re6043vi]
gi|395417453|gb|EJF83790.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella elizabethae
Re6043vi]
Length = 435
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 282/419 (67%), Positives = 339/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W+ K+++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMLRGHWNGLKEIIDKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC IA M A+ A
Sbjct: 62 TGMKWSFMPKQNDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCAIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYEAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + I +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGISFRELIEKHTGGIRGGWDNLLAVIPGGASCPVVRGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQIEGHTICALGDAAAWPVQGLIR+FRPE+ERRI E+
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQIEGHTICALGDAAAWPVQGLIRNFRPEIERRIDEY 419
>gi|320581561|gb|EFW95781.1| NADH-ubiquinone oxidoreductase subunit, mitochondrial precursor
[Ogataea parapolymorpha DL-1]
Length = 488
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/439 (65%), Positives = 349/439 (79%), Gaps = 10/439 (2%)
Query: 55 FGGLKDEDRIFTNLY-------GMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSG 107
+GGL D+DRIF NLY G LK AMK GDW++TK+++LKG WI++E+K SG
Sbjct: 17 YGGLADQDRIFQNLYLGNSKKHGTPSYDLKTAMKIGDWYKTKEILLKGDTWIIDEIKASG 76
Query: 108 LRGRGGAGFPSGLKWSFMPKVSDGR---PSYLVVNADESEPGTCKDREIMRHDPHKLLEG 164
LRGRGGAGFPSGLKWSFM + P YLVVNADE EPGTCKDREIMR +PHKL+EG
Sbjct: 77 LRGRGGAGFPSGLKWSFMNPPGWNKNVGPRYLVVNADEGEPGTCKDREIMRKEPHKLVEG 136
Query: 165 CLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGA 224
CL+AG M A+AAYIYIRGE+ NE L+ A +AY AG LG +ACGSG+ FDV+IH G
Sbjct: 137 CLVAGRAMNATAAYIYIRGEFYNEAVTLQNAINQAYEAGFLGPDACGSGFAFDVYIHRGM 196
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAY+CGEETAL+ESLEGK GKPRLKPPFPA GL+G P+TVTNVETVAV+PTI RRG W
Sbjct: 197 GAYVCGEETALIESLEGKAGKPRLKPPFPAGVGLFGRPSTVTNVETVAVAPTICRRGGKW 256
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
F+SFGR+ NSGTKLFC+SG+VN+PCTVEEEMSI ++ELID+HCGGV+GGWDNLLAVIPGG
Sbjct: 257 FSSFGRERNSGTKLFCISGNVNEPCTVEEEMSISMRELIDKHCGGVKGGWDNLLAVIPGG 316
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS P+L K CDD+LMDYDAL+ SGLGTAAVIV +K DV+ I RL FYKHESCGQ
Sbjct: 317 SSTPILNKETCDDILMDYDALRDAGSGLGTAAVIVFNKQADVLRGIQRLLAFYKHESCGQ 376
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG+ +L +M+R VG A+ +EID E+TK++EGH+ICA+G+A +WP QGL+++
Sbjct: 377 CTPCREGSTYLSKMMDRFYVGQAQEKEIDKALELTKKVEGHSICAMGEAFSWPYQGLVKN 436
Query: 465 FRPELERRIKEHAERELLE 483
F+P + RI+E+ + LE
Sbjct: 437 FKPLMIERIREYKRQNGLE 455
>gi|406706135|ref|YP_006756488.1| NADH dehydrogenase subunit F [alpha proteobacterium HIMB5]
gi|406651911|gb|AFS47311.1| NADH dehydrogenase subunit F [alpha proteobacterium HIMB5]
Length = 443
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 272/417 (65%), Positives = 337/417 (80%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+DEDRIF NLY + A+KRGDW TK++ KG +WI+ E+K S LRGRGGAGFP
Sbjct: 2 LRDEDRIFKNLYNDSGADYQSALKRGDWSNTKEICAKGREWIIEEIKSSELRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSF PK RP YLV+NADESEPGTCKDR+I+R +PHKL+EGCLIA + A A
Sbjct: 62 TGLKWSFAPKEVGSRPHYLVINADESEPGTCKDRDILRFEPHKLIEGCLIASFAVNAHAC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
Y+YIRGEY NE + L++A EAY ++GKNA G+G+DFD+ IHYGAGAYICGEETALLE
Sbjct: 122 YVYIRGEYYNEGQKLQKAIDEAYENKVIGKNASGTGWDFDIFIHYGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPT + NVET+AV PTILRRG WFA+ G+ N+GTK
Sbjct: 182 SLEGKKGQPRLKPPFPALIGLYGCPTIINNVETIAVVPTILRRGGKWFANIGKPKNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SG+VN PC VEEEM I LKELI+ H GGV GGWDNL AVIPGGSS+PLLPK+ICD
Sbjct: 242 IFCISGNVNNPCNVEEEMGISLKELIETHAGGVIGGWDNLQAVIPGGSSMPLLPKNICDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L A +SGLGTA ++V++ D++ +AR++ FYKHESCGQCTPCREG+GW+W
Sbjct: 302 ITMDFDSLMAEKSGLGTAGIVVINNDQDIIKCMARIARFYKHESCGQCTPCREGSGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
++ER+ G A +E+DML +VTKQIEGHTICA G+ ++WPVQGL+RHF+ E+E+R K
Sbjct: 362 MLERMAKGEASRDEVDMLMDVTKQIEGHTICAFGEGSSWPVQGLLRHFKKEVEKRNK 418
>gi|163868368|ref|YP_001609577.1| NADH dehydrogenase I subunit F [Bartonella tribocorum CIP 105476]
gi|161018024|emb|CAK01582.1| NADH dehydrogenase I chain F [Bartonella tribocorum CIP 105476]
Length = 435
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/419 (66%), Positives = 339/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W+ K+++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LTDKDRIFTNIYGLKDKSLKAAMLRGHWNGLKEIIDKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC IA M A+ A
Sbjct: 62 TGMKWSFMPKQNDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCAIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQTAVDECYEAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDK+TD++ AI R+S F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGVIVMDKTTDIIKAIWRISAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FRPE+ERRI E+
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRPEIERRIDEY 419
>gi|319408584|emb|CBI82239.1| NADH dehydrogenase I chain F [Bartonella schoenbuchensis R1]
Length = 435
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 281/420 (66%), Positives = 340/420 (80%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LKGAM RG W TK +V KG DWIV+EVKKSGLRGRGGAGFP
Sbjct: 2 LTDKDRIFTNIYGLKDKSLKGAMLRGHWDGTKAIVEKGRDWIVDEVKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA + A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIATFAIGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAIDECYDAGLLGKKT-KCGHVCDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPT V NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGVYGCPTIVNNVESIAVIPTILRRGASWFSSIGRSNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCT EE + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMISGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AVMDFDGMRDVGSSFGTGGVIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ G A+ EID+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FR E+E+RI ++
Sbjct: 361 LLERMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRSEIEQRIDDYT 420
>gi|395787836|ref|ZP_10467428.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella birtlesii
LL-WM9]
gi|395410458|gb|EJF77013.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella birtlesii
LL-WM9]
Length = 435
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/419 (66%), Positives = 336/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMSRGHWDGTKAIIEKGRDWIIDEIKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC IA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCAIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y A LLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYDADLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGSSWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + I +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGISFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEKMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGVIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQIEGHTICALGDAAAWP+QGLIR+FRPE+ERRI +
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQIEGHTICALGDAAAWPIQGLIRNFRPEIERRIDNY 419
>gi|395786218|ref|ZP_10465945.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella tamiae Th239]
gi|423716889|ref|ZP_17691079.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella tamiae Th307]
gi|395422516|gb|EJF88712.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella tamiae Th239]
gi|395428963|gb|EJF95038.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella tamiae Th307]
Length = 435
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 276/419 (65%), Positives = 341/419 (81%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LKGAM RG+W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDRSLKGAMARGNWDGTKAIIEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDREI+RHDPH L+EGC+IA M A AA
Sbjct: 62 TGMKWSFMPKENDGRPHYLVVNADESEPGTCKDREILRHDPHTLIEGCVIATFAMGAHAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQAAIDECYDAGLLGKKT-KHGHPCDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV+P+ILRRG +WFA+ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVAPSILRRGAEWFAAIGRLNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF SGHVN PCTVEE + + +ELID+H GG+RGGWDNLLAV+PGG+S P++ D
Sbjct: 241 LFMFSGHVNTPCTVEESLGLTFRELIDKHAGGIRGGWDNLLAVVPGGASCPVVRGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMREVGSSFGTGGAIVMDKSTDIIKAIWRITAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L +V++Q+EGHTICALGDAAAWPVQGLIR+FRPE+E+RI +
Sbjct: 361 LLGRMVEGRAQKREIDLLFDVSRQVEGHTICALGDAAAWPVQGLIRNFRPEIEKRIDAY 419
>gi|395781508|ref|ZP_10461926.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella
rattimassiliensis 15908]
gi|395420941|gb|EJF87199.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella
rattimassiliensis 15908]
Length = 435
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/419 (66%), Positives = 338/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W K+++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMLRGHWSGLKEIIDKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC +A M A+ A
Sbjct: 62 TGMKWSFMPKQNDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCALATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQTAVDECYEAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGVYGCPTTVNNVESIAVVPTILRRGASWFSSIGRTNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + I +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGISFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AVMDFDGMRDVGSSFGTGGVIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FRPE+ERRI E+
Sbjct: 361 LLGRMVEGRAQRREIDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRPEIERRIDEY 419
>gi|240850588|ref|YP_002971988.1| NADH dehydrogenase I subunit F [Bartonella grahamii as4aup]
gi|240267711|gb|ACS51299.1| NADH dehydrogenase I subunit F [Bartonella grahamii as4aup]
Length = 435
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 279/419 (66%), Positives = 339/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W+ K+++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMLRGHWNGLKEMIDKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC IA M A+ A
Sbjct: 62 TGMKWSFMPKQNDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCAIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYDAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT E+ + + +ELI++H GGVRGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEDALGVSFRELIEKHTGGVRGGWNNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FRPE+ERRI E+
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRPEIERRIDEY 419
>gi|156778103|gb|ABU95426.1| NADH dehydrogenase 51 kDa subunit, partial [Sawyeria marylandensis]
Length = 440
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 274/425 (64%), Positives = 340/425 (80%), Gaps = 1/425 (0%)
Query: 57 GLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGF 116
GLKD DRIFTNLY D FL GA KRGDW+ T++L+ KG+DWI++++KKSGLRGRGGAGF
Sbjct: 17 GLKDSDRIFTNLYKDFDDFLDGAKKRGDWNNTENLITKGSDWIIDQLKKSGLRGRGGAGF 76
Query: 117 PSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+GLK+SFMPK D +P YLV+N DESEP TCKDREI+RH+PHKL+EG L+ G + A A
Sbjct: 77 STGLKYSFMPK-KDNKPHYLVINGDESEPQTCKDREIIRHEPHKLIEGALVCGYSLNAKA 135
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
AYIY+RGE+ NE K L++A EAY +GL+GKNACG+GYDFDV +H GAGAY+ GEETALL
Sbjct: 136 AYIYVRGEFYNEVKVLQKAIDEAYKSGLIGKNACGTGYDFDVFVHRGAGAYVSGEETALL 195
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK GKPR+KPPFPA AGL+G PT V+NVETV+V PTIL+RG DWF+S GR NN+GT
Sbjct: 196 ESLEGKSGKPRIKPPFPAQAGLWGFPTMVSNVETVSVVPTILKRGADWFSSLGRPNNTGT 255
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
KL+C+SGHV PCTVEEEMSIPLK LI++HCGGVRGGWDNLLAVIPGGSS +PK +CD
Sbjct: 256 KLYCISGHVKYPCTVEEEMSIPLKTLIEKHCGGVRGGWDNLLAVIPGGSSTAPIPKKVCD 315
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
VLMD+D+L +V S GTA+++V+DKSTD+V A AR ++FYK ESCGQCTPCREG W+
Sbjct: 316 SVLMDFDSLASVNSSFGTASILVLDKSTDIVKAFARQAHFYKEESCGQCTPCREGYAWIT 375
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+++ + G +LE+ID L + + I G +ICAL D A + GLI +FRP LE + ++
Sbjct: 376 DMLDSFQKGEGRLEDIDFLMDTCQHISGRSICALADGACQGIIGLINNFRPYLEAKCQKK 435
Query: 477 AEREL 481
+ E
Sbjct: 436 NKHEF 440
>gi|406708282|ref|YP_006758634.1| NADH dehydrogenase subunit F [alpha proteobacterium HIMB59]
gi|406654058|gb|AFS49457.1| NADH dehydrogenase subunit F [alpha proteobacterium HIMB59]
Length = 434
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 274/418 (65%), Positives = 342/418 (81%), Gaps = 1/418 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+D+IF NL+G D FL+GA KRG W TK+++ K + ++ VK S LRGRGGAGF
Sbjct: 13 LSDKDKIFQNLHGFDDAFLEGAKKRGSWSNTKEILSKSQNDVIELVKSSQLRGRGGAGFS 72
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK G+ YLVVNADESEPGTCKDREI+R+DPH L+EGCLIA ++A+
Sbjct: 73 TGLKWSFMPK-DTGKQHYLVVNADESEPGTCKDREIIRNDPHTLIEGCLIASYAIQATKC 131
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY +E LE+A EAY L+GKNACGSGYDFD+++H GAGAYICGEETALLE
Sbjct: 132 YIYIRGEYHHEYVQLEKAIAEAYDNNLIGKNACGSGYDFDLYVHRGAGAYICGEETALLE 191
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA AGLYG PTT+ NVE++AV PTILRRGP+WF S G +NN+GTK
Sbjct: 192 SLEGKKGQPRLKPPFPAGAGLYGMPTTINNVESIAVVPTILRRGPEWFKSIGAENNTGTK 251
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SG+VN PCTVEEEM IPLKELI++H GGV GGW+NL A+IPGGSS P+L K +C+
Sbjct: 252 VFCISGNVNNPCTVEEEMGIPLKELIEKHAGGVDGGWNNLKAIIPGGSSTPMLSKDVCET 311
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLM++D L+A SGLGTA VIV++K+ D+ I R ++FYKHESCGQCTPCREGTGW++
Sbjct: 312 VLMNFDDLRANGSGLGTAGVIVVNKNHDITQVIERFAHFYKHESCGQCTPCREGTGWMFR 371
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+M++L G E++++L+ VTKQIEGHTICALGDAAAWP+QGLI++F+PEL ++ +
Sbjct: 372 MMQKLVRGEISPEQLELLENVTKQIEGHTICALGDAAAWPIQGLIKNFKPELLKKYNQ 429
>gi|395784245|ref|ZP_10464084.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella melophagi K-2C]
gi|395424000|gb|EJF90188.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella melophagi K-2C]
Length = 435
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/420 (66%), Positives = 340/420 (80%), Gaps = 1/420 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LKGA+ RG W TK +V KG DWIV+EVKKSGLRGRGGAGFP
Sbjct: 2 LTDKDRIFTNIYGLKDKSLKGAILRGHWDGTKAIVEKGRDWIVDEVKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA + A+ A
Sbjct: 62 TGMKWSFMPKQNDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIATFAIGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAIDECYNAGLLGKKT-KCGHVCDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPT V NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGVYGCPTIVNNVESIAVIPTILRRGASWFSSIGRSNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCT EE + + +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFMISGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWDNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGVIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ER+ G A+ EID+L EV+KQ+EG+TICALGDAAAWPVQGLIR+FR E+E+RI ++
Sbjct: 361 LLERMVEGRAQKREIDLLFEVSKQVEGYTICALGDAAAWPVQGLIRNFRSEIEQRIDDYT 420
>gi|49475653|ref|YP_033694.1| NADH dehydrogenase I subunit F [Bartonella henselae str. Houston-1]
gi|49238460|emb|CAF27688.1| NADH dehydrogenase I, F subunit [Bartonella henselae str.
Houston-1]
Length = 435
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 276/419 (65%), Positives = 339/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+ D LK A+ RG W T+ ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNLYGLKDKSLKAAISRGHWDGTRAIIDKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC++A M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVLATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYDAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWP+QGLIR+FRPE+ERRI ++
Sbjct: 361 LLGRMVEGKAQKREIDLLFEVSKQVEGHTICALGDAAAWPIQGLIRNFRPEIERRIDDY 419
>gi|423712689|ref|ZP_17686989.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella washoensis
Sb944nv]
gi|395411482|gb|EJF78004.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella washoensis
Sb944nv]
Length = 435
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/419 (66%), Positives = 337/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+ D LK AM RG W K ++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNLYGLKDKSLKAAMLRGHWDGIKSIIDKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC IA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCAIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYEAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT E+ + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEDALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AVMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ E+D+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FRPE+ERRI ++
Sbjct: 361 LLGRMVEGRAQKREVDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRPEIERRIDDY 419
>gi|395779972|ref|ZP_10460440.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella washoensis
085-0475]
gi|395419722|gb|EJF86018.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella washoensis
085-0475]
Length = 435
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/419 (66%), Positives = 337/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+ D LK AM RG W K ++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNLYGLKDKSLKAAMLRGHWDGIKSIIDKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC IA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCAIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYEAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT E+ + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEDALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AVMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ E+D+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FRPE+ERRI ++
Sbjct: 361 LLGRMVEGRAQKREVDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRPEIERRIDDY 419
>gi|395766612|ref|ZP_10447151.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella doshiae NCTC
12862]
gi|395415736|gb|EJF82163.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella doshiae NCTC
12862]
Length = 434
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 279/419 (66%), Positives = 338/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTNLYG+ D LK AM RG W TK ++ KG +WI++EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNLYGLKDKSLKAAMLRGHWDGTKAIIDKGRNWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC A M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCAFATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYDAGLLGKKT-KYGHACDIVIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANIGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT E+ + + +ELI++H GGVRGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEDALGVSFRELIEKHTGGVRGGWNNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FRPE+ERRI+++
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRPEIERRIEDY 419
>gi|121601753|ref|YP_989075.1| NADH dehydrogenase I subunit F [Bartonella bacilliformis KC583]
gi|421760881|ref|ZP_16197692.1| NADH dehydrogenase I subunit F [Bartonella bacilliformis INS]
gi|120613930|gb|ABM44531.1| NADH dehydrogenase (quinone), F subunit [Bartonella bacilliformis
KC583]
gi|411174112|gb|EKS44148.1| NADH dehydrogenase I subunit F [Bartonella bacilliformis INS]
Length = 435
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 275/419 (65%), Positives = 337/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGA+ RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDRSLKGAISRGHWDNTKAIIEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AG LGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQAAIDECYDAGFLGKKT-KHGHACDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGIYGCPTTVNNVESIAVAPTILRRGASWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCT EE + I +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMISGHVNAPCTFEESLGISFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDIMD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGAIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWPVQGLIR+FR E+ERRI ++
Sbjct: 361 LLGRMVEGKAQKREIDLLFEVSKQVEGHTICALGDAAAWPVQGLIRNFRSEIERRIDDY 419
>gi|395792416|ref|ZP_10471850.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395432594|gb|EJF98573.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 445
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 277/421 (65%), Positives = 338/421 (80%), Gaps = 1/421 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L D+DRIFTN+YG + LK A+ RG W TK ++ KG DWI++EVK SGLRGRGGAG
Sbjct: 10 GMLADKDRIFTNIYGFKEKSLKAAISRGHWDGTKAIIEKGRDWIIDEVKASGLRGRGGAG 69
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
FP+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+ A M A+
Sbjct: 70 FPTGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVFATFAMGAN 129
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETAL
Sbjct: 130 VAFIYIRGEYIREREALQAAVDECYDAGLLGKKT-KYGHACDIILHHGAGAYICGEETAL 188
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
LESLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN G
Sbjct: 189 LESLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVG 248
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKLF VSGHVN PCT E+ + + +ELI++H GGVRGGWDNLLAVIPGG+S P++
Sbjct: 249 TKLFMVSGHVNAPCTFEDALGVSFRELIEKHAGGVRGGWDNLLAVIPGGASCPVVRGEDM 308
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
D +MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 309 VDAIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWM 368
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWP+QGLIR+FRPE+ERRI +
Sbjct: 369 MRLLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPIQGLIRNFRPEIERRIDD 428
Query: 476 H 476
+
Sbjct: 429 Y 429
>gi|385303377|gb|EIF47454.1| nadh-ubiquinone oxidoreductase 51 kda subunit [Dekkera bruxellensis
AWRI1499]
Length = 501
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 299/467 (64%), Positives = 357/467 (76%), Gaps = 17/467 (3%)
Query: 31 STQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHD------PF-LKGAMKRG 83
S+ G TA P + H GGL+D+DRIF NLY + P+ LK AMK G
Sbjct: 8 SSSGIRTAGRRFLATAQATPNRVH-GGLQDQDRIFQNLYLGNSKRCHTGPWDLKSAMKIG 66
Query: 84 DWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNA 140
DW++TK+++LKG WI++E+KKSGLRGRGGAGFPSGLKWSFM + P Y+VVN
Sbjct: 67 DWYKTKEIILKGDKWIIDEMKKSGLRGRGGAGFPSGLKWSFMNPPGWEKNVGPRYVVVNG 126
Query: 141 DESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAY 200
DE EPGTCKDREIMR +PHKL+EGCL+AG M A+AAYIY+RGE+ +E + L+RA E Y
Sbjct: 127 DEGEPGTCKDREIMRKEPHKLVEGCLLAGRAMNATAAYIYVRGEFYHEAETLQRAIDEXY 186
Query: 201 AAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYG 260
AG LGKNACGSGYDFDV IH G GAYICGEETAL+ESLEGKQGKPRLKPPFPA GL+G
Sbjct: 187 KAGFLGKNACGSGYDFDVFIHRGEGAYICGEETALIESLEGKQGKPRLKPPFPAGVGLFG 246
Query: 261 CPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLK 320
P+TVTNVETVAVSPTILRRG WFASFGR+ N GTKL+C+SG+VN+PCTVEEEMSIPLK
Sbjct: 247 RPSTVTNVETVAVSPTILRRGSSWFASFGRERNQGTKLYCISGNVNEPCTVEEEMSIPLK 306
Query: 321 ELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVM 380
+LI++H GGV+GGWDNL AVIPGGSS P+L C+D +MDYD+L+ SG GTAAV V
Sbjct: 307 DLIEKHAGGVKGGWDNLQAVIPGGSSTPILTAKECEDQIMDYDSLRDAGSGFGTAAVSVF 366
Query: 381 DKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTK 440
DK DVV I RL FYKHESCGQCTPCREG+ +L +M+RL VG A +EID E+T
Sbjct: 367 DKQADVVHGIQRLLAFYKHESCGQCTPCREGSTYLSKMMDRLAVGQANEKEIDQALELTY 426
Query: 441 QIEGHTICALGDAAAWPVQGLIRHFRPELERRI----KEH--AEREL 481
++ GH+ICA+G+A +WP QGL++ FRP L +RI KEH A+REL
Sbjct: 427 KVCGHSICAMGEAFSWPYQGLVKKFRPLLVQRIQNYKKEHNLADREL 473
>gi|423713827|ref|ZP_17688087.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395421633|gb|EJF87869.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 445
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 276/421 (65%), Positives = 338/421 (80%), Gaps = 1/421 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L D+DRIFTN+YG + LK A+ RG W TK ++ KG DWI++EVK SGLRGRGGAG
Sbjct: 10 GMLADKDRIFTNIYGFKEKSLKAAISRGHWDGTKAIIEKGRDWIIDEVKASGLRGRGGAG 69
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
FP+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+ A M A+
Sbjct: 70 FPTGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVFATFAMGAN 129
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
A+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETAL
Sbjct: 130 VAFIYIRGEYIREREALQAAVDECYDAGLLGKKT-KYGHACDIILHHGAGAYICGEETAL 188
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
LESLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN G
Sbjct: 189 LESLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVG 248
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKLF VSGHVN PCT E+ + + +ELI++H GG+RGGWDNLLAVIPGG+S P++
Sbjct: 249 TKLFMVSGHVNAPCTFEDALGVSFRELIEKHAGGIRGGWDNLLAVIPGGASCPVVRGEDM 308
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
D +MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 309 VDAIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWM 368
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWP+QGLIR+FRPE+ERRI +
Sbjct: 369 MRLLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPIQGLIRNFRPEIERRIDD 428
Query: 476 H 476
+
Sbjct: 429 Y 429
>gi|319898887|ref|YP_004158980.1| NADH dehydrogenase I subunit F [Bartonella clarridgeiae 73]
gi|319402851|emb|CBI76402.1| NADH dehydrogenase I chain F [Bartonella clarridgeiae 73]
Length = 435
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 274/424 (64%), Positives = 338/424 (79%), Gaps = 1/424 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LKGAM RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDKSLKGAMLRGHWDNTKAIIEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIATFAMGANIA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQVAIDECYEAGLLGKKT-KYGHVCDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGVYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCT EE + + +ELI++H GG+RGGWDNLLAVIPGG+S P++ D
Sbjct: 241 LFMISGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWDNLLAVIPGGASCPIVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ + S GT IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDIGSSFGTGGAIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWP+QGLIR+FR E+E+RI ++
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPIQGLIRNFRSEIEQRIDDYT 420
Query: 478 EREL 481
+
Sbjct: 421 RSAI 424
>gi|395789880|ref|ZP_10469388.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella taylorii 8TBB]
gi|395428102|gb|EJF94184.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella taylorii 8TBB]
Length = 435
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 276/419 (65%), Positives = 338/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMSRGHWDDTKGIIEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC +A M A+ A
Sbjct: 62 TGMKWSFMPKESDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCALATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYDAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHV+ PCT EE + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVDAPCTFEEALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGVIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV++Q+EGHTICALGDAAAWP+QGLIR+FRPE+ERRI ++
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSQQVEGHTICALGDAAAWPIQGLIRNFRPEIERRIDDY 419
>gi|49474182|ref|YP_032224.1| NADH dehydrogenase I subunit F [Bartonella quintana str. Toulouse]
gi|49239686|emb|CAF26061.1| NADH dehydrogenase I, F subunit [Bartonella quintana str. Toulouse]
Length = 435
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 275/419 (65%), Positives = 337/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W K ++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMSRGHWDGIKAIIDKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC +A M A+ A
Sbjct: 62 TGMKWSFMPKQNDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCALATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQAAVDECYDAGLLGKKT-KYGHVCDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGIYGCPTTVNNVESIAVIPTILRRGASWFSSIGRANNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + + +ELI++H GG+RGGW NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWSNLLAVIPGGASCPVVRGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGVIVMDKSTDIIKAIWRITAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV++Q+EGHTICALGDAAAWP+QGLIR+FRPE+ERRI ++
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSEQVEGHTICALGDAAAWPIQGLIRNFRPEIERRIDDY 419
>gi|409401847|ref|ZP_11251501.1| NADH dehydrogenase I subunit F [Acidocella sp. MX-AZ02]
gi|409129484|gb|EKM99335.1| NADH dehydrogenase I subunit F [Acidocella sp. MX-AZ02]
Length = 430
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 272/419 (64%), Positives = 338/419 (80%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKDEDRI+ NLYG D L GA RGDW T +++ KG D ++ E+K SG+RGRGGAGFP
Sbjct: 2 LKDEDRIYQNLYGQQDWKLAGARARGDWSGTAEIIAKGRDALIEEMKASGMRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRPSY+V+NADESEPGTCKDR+I+R++PHKL+EG LIA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPSYVVINADESEPGTCKDRDIIRNEPHKLIEGALIASFAMGANKA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY NE + L+ A EAY AGL+GKNA GSG+DFD+ + GAGAYICGEE+A+LE
Sbjct: 122 FIYIRGEYYNEAQRLQFAIDEAYEAGLIGKNAAGSGWDFDLVLQRGAGAYICGEESAMLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G PR+KPPFPA GLYGCPTTV NVET+A PTI+RRG WFA G+ N+GTK
Sbjct: 182 SLEGKKGMPRMKPPFPAAMGLYGCPTTVNNVETIAGVPTIMRRGGAWFAGLGKPKNAGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEE+ IPL+ELI++H GGVRGGWDNL AVIPGG+S P+L K +CD
Sbjct: 242 IFCISGHVNNPCNVEEELGIPLRELIEKHAGGVRGGWDNLGAVIPGGASSPVLNKAMCDT 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
LMD+D+L A +S +G+ A+IVMDKS DVV AI RLS F+KHESCGQCTPCREGTGW+
Sbjct: 302 QLMDFDSLAASKSMMGSGAIIVMDKSVDVVKAIWRLSKFFKHESCGQCTPCREGTGWMMR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
M+R+ A L +I +L++VT Q+ GHTICA G+A++WP+QG++R FRPE+E R ++
Sbjct: 362 QMDRIVQNKATLADIHLLEQVTTQVAGHTICAFGEASSWPIQGMMRAFRPEVEARATDY 420
>gi|451942053|ref|YP_007462690.1| NADH dehydrogenase subunit F [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451901440|gb|AGF75902.1| NADH dehydrogenase subunit F [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 435
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 274/419 (65%), Positives = 337/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ + LK A+ RG W TK ++ KG DWI+ E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKERSLKAAISRGHWDGTKAIIEKGRDWIIEEIKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+ A M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVFATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDECYDAGLLGKKT-KYGHACDIILHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRTNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT E+ + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEDALGVSFRELIEKHAGGIRGGWNNLLAVIPGGASCPVVSGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWP+QGLIR+FRPE+ERRI E+
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPIQGLIRNFRPEIERRIDEY 419
>gi|403530461|ref|YP_006664990.1| NADH dehydrogenase I subunit F [Bartonella quintana RM-11]
gi|403232533|gb|AFR26276.1| NADH dehydrogenase I subunit F [Bartonella quintana RM-11]
Length = 435
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 274/419 (65%), Positives = 338/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W K ++ KG DWI++EVK SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMSRGHWDGIKAIIDKGRDWIIDEVKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC +A M A+ A
Sbjct: 62 TGMKWSFMPKQNDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCALATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQAAVDECYDAGLLGKKT-KYGHVCDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGIYGCPTTVNNVESIAVIPTILRRGASWFSSIGRANNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGVRDVGSSFGTGGMIVMDKSTDIIKAIWRITAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV++Q+EGHTICALGDAAAWP+QGLIR+FRPE+ERRI ++
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSEQVEGHTICALGDAAAWPIQGLIRNFRPEIERRIDDY 419
>gi|451940717|ref|YP_007461355.1| NADH dehydrogenase subunit F [Bartonella australis Aust/NH1]
gi|451900104|gb|AGF74567.1| NADH dehydrogenase subunit F [Bartonella australis Aust/NH1]
Length = 435
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 272/419 (64%), Positives = 339/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D DRIFTN+YG+ D LK A+ RG W+ TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADRDRIFTNIYGLKDKSLKAAISRGHWNGTKAIIEKGRDWIIDEIKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK +DGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA M A+ A
Sbjct: 62 TGMKWSFMPKHTDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQAAIDECYDAGLLGKKT-KYGHVCDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNAGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT E+ +S+ +ELI++H GG+RGGW NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEDALSVSFRELIEKHTGGIRGGWGNLLAVIPGGASCPVVRGEDVVD 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ + S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDIGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWP+QGLIR+FR E+ERRI ++
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPIQGLIRNFRLEIERRIDDY 419
>gi|395765854|ref|ZP_10446445.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella sp. DB5-6]
gi|395410859|gb|EJF77406.1| NADH-quinone oxidoreductase subunit F 1 [Bartonella sp. DB5-6]
Length = 435
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 275/419 (65%), Positives = 336/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK AM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAMSRGHWDGTKAIIEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RH+PH L+EGC +A M A+ A
Sbjct: 62 TGMKWSFMPKESDGRPHYLVVNADESEPGTCKDRDILRHEPHTLIEGCALATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IYIRGEY+ ER+ L+ A Y AGLLGK G+ D+ IH+GAGAYICGEETALLE
Sbjct: 122 FIYIRGEYIREREALQAAVDACYDAGLLGKKT-KYGHACDIIIHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGIYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT EE + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ D
Sbjct: 241 LFMVSGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPVVRGEDMID 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT VIVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGVIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV++Q+EGHTICALGDAAAWP+QGLIR+FR E+ERRI ++
Sbjct: 361 LLGRMVEGKAQKREIDLLFEVSQQVEGHTICALGDAAAWPIQGLIRNFRSEIERRIDDY 419
>gi|336382398|gb|EGO23548.1| hypothetical protein SERLADRAFT_415998 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1368
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 289/444 (65%), Positives = 331/444 (74%), Gaps = 29/444 (6%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIFTN Y HD LKGA RGDWHRTKD++LKG WI+ +K GLRGRG A
Sbjct: 14 YGGLKDQDRIFTNAYCRHDHGLKGAQSRGDWHRTKDIILKGDSWIIQTIKDPGLRGRGSA 73
Query: 115 GFPSGLKWSFMPK--------------------VSDGRPSYLVVNADESEPGTCKDREIM 154
GFPSGLKWSFM K R YLVVNADE EPG CKDREI+
Sbjct: 74 GFPSGLKWSFMNKPGWEKDPRCVCCLPGYSLTHTPANRQRYLVVNADEGEPGMCKDREIL 133
Query: 155 RHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGY 214
DPHKL+EGCL+ G GM A+AA IYI GE+ E N E Y GLLGK+ACGSGY
Sbjct: 134 CGDPHKLVEGCLVVGRGMNATAACIYICGEFFQEAIN------EVYTVGLLGKDACGSGY 187
Query: 215 DFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVS 274
FDV++H GAGAYICGEETAL+ESL+GKQGKPR KPPFPA+ GL+GCPTTV N+ETVAV+
Sbjct: 188 MFDVYLHRGAGAYICGEETALIESLKGKQGKPRSKPPFPADVGLFGCPTTVANMETVAVA 247
Query: 275 PTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGW 334
PTI RRG WFA FGR+ N GTKLFCVSGHVN PC V+EEMSIPL+EL++RHCGGVRGGW
Sbjct: 248 PTICRRGGSWFAGFGRERNQGTKLFCVSGHVNNPCIVKEEMSIPLRELVERHCGGVRGGW 307
Query: 335 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLS 394
DNLL +IPGG SVP+LP C +VLMDYD LK QSGLGT AVIVMDK +V AIA S
Sbjct: 308 DNLLGIIPGGCSVPVLPIDKCGEVLMDYDLLKDAQSGLGTGAVIVMDK---IVAAIACFS 364
Query: 395 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 454
FYKHESCGQCT CREGT W+ +M+R+ G + EIDML ++TKQ+EG TIC LGDAA
Sbjct: 365 QFYKHESCGQCTLCREGTTWMMNMMDRMVEGRGHIREIDMLLKLTKQVEGRTICTLGDAA 424
Query: 455 AWPVQGLIRHFRPELERRIKEHAE 478
AWP+QGL+ HF P++E I + E
Sbjct: 425 AWPIQGLMHHFWPKVENCIAKFRE 448
>gi|336369619|gb|EGN97960.1| hypothetical protein SERLA73DRAFT_56330 [Serpula lacrymans var.
lacrymans S7.3]
Length = 461
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 291/432 (67%), Positives = 333/432 (77%), Gaps = 12/432 (2%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P +GGLKD+DRIFTN Y HD LKGA RGDWHRTKD++LKG WI+ +K GLR
Sbjct: 6 PPVRRYGGLKDQDRIFTNAYCRHDHGLKGAQSRGDWHRTKDIILKGDSWIIQTIKDPGLR 65
Query: 110 GRGGAGFPSGLKWSFMPK---VSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCL 166
GRG AGFPSGLKWSFM K D R YLVVNADE EPG CKDREI+ DPHKL+EGCL
Sbjct: 66 GRGSAGFPSGLKWSFMNKPGWEKDPRCRYLVVNADEGEPGMCKDREILCGDPHKLVEGCL 125
Query: 167 IAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGA 226
+ G GM A+AA IYI GE+ E N E Y GLLGK+ACGSGY FDV++H GAGA
Sbjct: 126 VVGRGMNATAACIYICGEFFQEAIN------EVYTVGLLGKDACGSGYMFDVYLHRGAGA 179
Query: 227 YICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFA 286
YICGEETAL+ESL+GKQGKPR KPPFPA+ GL+GCPTTV N+ETVAV+PTI RRG WFA
Sbjct: 180 YICGEETALIESLKGKQGKPRSKPPFPADVGLFGCPTTVANMETVAVAPTICRRGGSWFA 239
Query: 287 SFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSS 346
FGR+ N GTKLFCVSGHVN PC V+EEMSIPL+EL++RHCGGVRGGWDNLL +IPGG S
Sbjct: 240 GFGRERNQGTKLFCVSGHVNNPCIVKEEMSIPLRELVERHCGGVRGGWDNLLGIIPGGCS 299
Query: 347 VPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCT 406
VP+LP C +VLMDYD LK QSGLGT AVIVMDK +V AIA S FYKHESCGQCT
Sbjct: 300 VPVLPIDKCGEVLMDYDLLKDAQSGLGTGAVIVMDK---IVAAIACFSQFYKHESCGQCT 356
Query: 407 PCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFR 466
CREGT W+ +M+R+ G + EIDML ++TKQ+EG TIC LGDAAAWP+QGL+ HF
Sbjct: 357 LCREGTTWMMNMMDRMVEGRGHIREIDMLLKLTKQVEGRTICTLGDAAAWPIQGLMHHFW 416
Query: 467 PELERRIKEHAE 478
P++E I + E
Sbjct: 417 PKVENCIAKFRE 428
>gi|319404254|emb|CBI77847.1| NADH dehydrogenase I chain F [Bartonella rochalimae ATCC BAA-1498]
Length = 435
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 272/419 (64%), Positives = 337/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LK A+ RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDKSLKAAVLRGHWDGTKAIIEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIATFAMGANIA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQAAIDECYEAGLLGKKT-KYGHACDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGVYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT E+ + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ +
Sbjct: 241 LFMVSGHVNAPCTFEDALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPIVRGEDMIN 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWP+QGLIR+FR E+ERRI ++
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPIQGLIRNFRSEIERRIDDY 419
>gi|319407262|emb|CBI80901.1| NADH dehydrogenase I chain F [Bartonella sp. 1-1C]
Length = 435
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 273/419 (65%), Positives = 336/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG D LK A+ RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGFKDKSLKAAVLRGHWDGTKAIIEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIATFAMGANIA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQAAIDECYEAGLLGKKT-KYGHACDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGVYGCPTTVNNVESIAVVPTILRRGASWFSSIGRANNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVN PCT E+ + + +ELI++H GG+RGGW NLLAVIPGG+S P++ +
Sbjct: 241 LFMVSGHVNAPCTFEDALGVSFRELIEKHTGGIRGGWSNLLAVIPGGASCPIVRGEDMIN 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT +IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGMIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQIEGHTICALGDAAAWP+QGLIR+FR E+ERRI ++
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQIEGHTICALGDAAAWPIQGLIRNFRSEIERRIDDY 419
>gi|254456627|ref|ZP_05070056.1| NADH oxidoreductase (quinone), F subunit [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083629|gb|EDZ61055.1| NADH oxidoreductase (quinone), F subunit [Candidatus Pelagibacter
sp. HTCC7211]
Length = 443
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 268/415 (64%), Positives = 332/415 (80%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIF NLY L + KRGDW TK+L KG DWI+NE+K S LRGRGGAGFP
Sbjct: 2 LKDKDRIFQNLYNDLGSDLNSSQKRGDWVNTKELTDKGRDWIINEIKSSELRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSF PK RP YLV+N DESEPGTCKDR+I+R +PHKL+EGCLIA ++A
Sbjct: 62 TGLKWSFAPKEVGSRPHYLVINGDESEPGTCKDRDILRFEPHKLIEGCLIASYAVQAHVC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY + + L+ A EAY L+GKNA G+G+D D++IHYGAGAYICGEETALLE
Sbjct: 122 YIYIRGEYFIDGQKLQAAIDEAYKKKLIGKNAAGTGWDLDIYIHYGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PRLKPPFPA GLYGCPT + NVET+AV PTILRRG WF+S GR+ N+GTK
Sbjct: 182 SIEGKKGQPRLKPPFPALIGLYGCPTIINNVETIAVVPTILRRGGKWFSSLGRERNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SG+VN PC VEEEM+IPLKELI+ H GGV GGWDNL AVIPGGSS+PL+PK C+
Sbjct: 242 IFCISGNVNNPCNVEEEMNIPLKELIEVHAGGVIGGWDNLQAVIPGGSSMPLIPKKKCET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L A +SGLGTA ++V++K D++ +AR++ FYKHESCGQCTPCREG+GW+W
Sbjct: 302 LTMDFDSLMAEKSGLGTAGIVVINKDQDIIKCMARIARFYKHESCGQCTPCREGSGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
++ER+ G A +EI+ML +VT QI GHTICA G+ ++WPVQGL+RHF+ E+E R
Sbjct: 362 MLERMAKGEATKDEIEMLGDVTNQIAGHTICAFGEGSSWPVQGLLRHFKKEIEER 416
>gi|319405693|emb|CBI79316.1| NADH dehydrogenase I chain F [Bartonella sp. AR 15-3]
Length = 435
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 271/419 (64%), Positives = 336/419 (80%), Gaps = 1/419 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIFTN+YG+ D LK A+ RG W TK ++ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LADKDRIFTNIYGLKDKSLKAAVLRGHWDGTKAIIEKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK SDGRP YLVVNADESEPGTCKDR+I+RHDPH L+EGC+IA M A+ A
Sbjct: 62 TGMKWSFMPKQSDGRPHYLVVNADESEPGTCKDRDILRHDPHTLIEGCVIATFAMGANVA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
+IY+RGEY+ ER+ L+ A E Y AGLLGK G+ D+ +H+GAGAYICGEETALLE
Sbjct: 122 FIYVRGEYIREREALQAAIDECYEAGLLGKKT-KYGHVCDIIVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN G+YGCPTTV NVE++AV PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGVYGCPTTVNNVESIAVVPTILRRGASWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF +SGHVN PCT EE + + +ELI++H GG+RGGW+NLLAVIPGG+S P++ +
Sbjct: 241 LFMISGHVNAPCTFEEALGVSFRELIEKHTGGIRGGWNNLLAVIPGGASCPIVRGEDMIN 300
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+MD+D ++ V S GT IVMDKSTD++ AI R++ F+KHESCGQCTPCREGTGW+
Sbjct: 301 AIMDFDGMRDVGSSFGTGGAIVMDKSTDIIKAIWRIAAFFKHESCGQCTPCREGTGWMMR 360
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R+ G A+ EID+L EV+KQ+EGHTICALGDAAAWP+QGLIR+FR E+E+RI +
Sbjct: 361 LLGRMVEGRAQKREIDLLFEVSKQVEGHTICALGDAAAWPIQGLIRNFRSEIEQRIDNY 419
>gi|195342920|ref|XP_002038046.1| GM17964 [Drosophila sechellia]
gi|194132896|gb|EDW54464.1| GM17964 [Drosophila sechellia]
Length = 435
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 293/425 (68%), Positives = 329/425 (77%), Gaps = 28/425 (6%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
FG L DEDRIFTNLYG HD LKGA+KRGDW++TK++VLKGADWIVNE+K SGLRGRGGA
Sbjct: 36 FGPLADEDRIFTNLYGRHDWRLKGALKRGDWYKTKEIVLKGADWIVNEIKTSGLRGRGGA 95
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFPSG+KWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCLIAG M A
Sbjct: 96 GFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 155
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AAYIYIRGE+ NE N++ A EAY AG YDFDV +H GAGAYICGEETA
Sbjct: 156 QAAYIYIRGEFYNEASNMQLAIAEAYQAG----------YDFDVFMHRGAGAYICGEETA 205
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGKQGKPRLKPPFPA+ G++ ETVAV G AS
Sbjct: 206 LIESLEGKQGKPRLKPPFPADVGVFDAQPQY-QCETVAVHHHWPSGGVGSPAS------- 257
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
V PCTVEEEMSIPLKELI+RHCGGV GGWDNLL VIPGGSS P++PK++
Sbjct: 258 ----------VAPPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNV 307
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
CDDV+MD+D L A Q+ LGTAA+IVMDKSTDV+ AIARL FYKHESCGQCTPCREG GW
Sbjct: 308 CDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGW 367
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ IM R G+A+ EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPE+E+R++
Sbjct: 368 MNKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 427
Query: 475 EHAER 479
HA+R
Sbjct: 428 LHAKR 432
>gi|354593933|ref|ZP_09011976.1| NADH dehydrogenase I subunit F [Commensalibacter intestini A911]
gi|353673044|gb|EHD14740.1| NADH dehydrogenase I subunit F [Commensalibacter intestini A911]
Length = 440
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 269/419 (64%), Positives = 331/419 (78%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRI+ NL+G D L GA +RGDW TKD++ G D I+ V SGLRGRGGAGF
Sbjct: 2 LSDKDRIYLNLHGHDDWKLAGARRRGDWDNTKDILALGRDTIIKTVIDSGLRGRGGAGFS 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK P YLV+N DESEPGTCKDRE+MRH+PHK++EG L+A + A A
Sbjct: 62 TGLKWSFMPKKEGPLPHYLVINGDESEPGTCKDREVMRHEPHKIVEGALLASFAIGAHTA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY NE +L+ A EAY AGL+GKNACGSG+DFD +IH GAGAYICGEETA LE
Sbjct: 122 YIYIRGEYYNEANHLQAAIDEAYEAGLIGKNACGSGWDFDFYIHRGAGAYICGEETAQLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPA GLYGCPTT+ NVE+++V+PTILRRG WFA GR NN+G K
Sbjct: 182 SLEGKKGQPRLKPPFPAGKGLYGCPTTINNVESISVTPTILRRGSAWFAGIGRANNTGPK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EE + +PL+E+I+ H GGVRGGWDNLLAVIPGG+S+P+L K C+
Sbjct: 242 LMAISGHVNTPCVFEEALGLPLREVIETHGGGVRGGWDNLLAVIPGGTSMPMLNKETCET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
V+MD+D ++ V SGLGTA ++VMDKSTD++ A+ LS FYKHESCGQCTPCREG+ W+
Sbjct: 302 VIMDFDGMRDVGSGLGTAGIVVMDKSTDIIRAVTLLSKFYKHESCGQCTPCREGSNWVLK 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M+R+ G A++EEIDML +VTK IE TICA+G + AWPVQ LIR+FRP +E+RI ++
Sbjct: 362 VMKRMTEGRAEIEEIDMLMDVTKSIENTTICAMGMSVAWPVQALIRNFRPVMEQRIMDY 420
>gi|71083587|ref|YP_266306.1| NADH dehydrogenase I subunit F [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062700|gb|AAZ21703.1| NADH Dehydrogenase I Chain F [Candidatus Pelagibacter ubique
HTCC1062]
Length = 443
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 260/415 (62%), Positives = 329/415 (79%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLY ++ + RGDW T +++ KG +WI+ EVK S LRGRGGAGFP
Sbjct: 2 LNDKDRIFQNLYNDKGSDVESSKNRGDWVDTAEIIKKGREWIIEEVKSSELRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSF PK RP YLV+N DESEPGTCKDR+I+R +PHKL+EGCLIA ++A
Sbjct: 62 TGLKWSFAPKELGSRPHYLVINGDESEPGTCKDRDILRFEPHKLIEGCLIASYAVQAHVC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY + + L++A EAY L+GKNA G+G+D D++IHYGAGAYICGEETALLE
Sbjct: 122 YIYIRGEYFIDGQKLQKAIDEAYEKKLIGKNASGTGWDLDIYIHYGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PRLKPPFPA GLYGCPT + NVET+AV PTILR+G WFAS G+ N+GTK
Sbjct: 182 SIEGKKGQPRLKPPFPALIGLYGCPTIINNVETIAVVPTILRKGGKWFASLGKAKNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SG+VNKPC VEEEMSI LKELI+ H GGV GGWDNL AVIPGGSS+P++PK C+
Sbjct: 242 IFCISGNVNKPCNVEEEMSISLKELIEVHAGGVIGGWDNLQAVIPGGSSMPIIPKKTCET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L A +SGLGTA ++V++ D++ +AR++ FYKHESCGQCTPCREG+GW+W
Sbjct: 302 LTMDFDSLVAEKSGLGTAGIVVINNDQDIIKCMARIARFYKHESCGQCTPCREGSGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
++ER+ G A +E++ML +VT QI GHTICA G+ ++WPVQGL+RHFR E+E R
Sbjct: 362 MLERMAKGEASKDEVEMLGDVTNQIAGHTICAFGEGSSWPVQGLLRHFRKEIEER 416
>gi|326919902|ref|XP_003206216.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like, partial [Meleagris gallopavo]
Length = 374
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/374 (75%), Positives = 314/374 (83%)
Query: 113 GAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
GAGFP+GLKWSFM K DGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+AG M
Sbjct: 1 GAGFPTGLKWSFMNKPPDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVAGRAM 60
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
A AAYIYIRGE+ NE NL+ A +EAY AGLLGKNACGS Y FDV + GAGAYICGEE
Sbjct: 61 GARAAYIYIRGEFYNEASNLQVAIREAYEAGLLGKNACGSDYAFDVFVVRGAGAYICGEE 120
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
TAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV+PTI RRG WFA FGR+
Sbjct: 121 TALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVAPTICRRGGAWFAGFGRER 180
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGVRGGWDNLLAVIPGGSS PLLPK
Sbjct: 181 NSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVRGGWDNLLAVIPGGSSTPLLPK 240
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
+C+ VLMD+D+L QSGLGTAAVIVMDKSTD+V AIARL FYKHESCGQCTPCREG
Sbjct: 241 SVCETVLMDFDSLVQAQSGLGTAAVIVMDKSTDIVKAIARLIEFYKHESCGQCTPCREGV 300
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R
Sbjct: 301 DWMNKVMARFVRGDAQTAEIDALWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDR 360
Query: 473 IKEHAERELLEATA 486
++ E + A+A
Sbjct: 361 MRRFGEAKAQAASA 374
>gi|91761992|ref|ZP_01263957.1| NADH Dehydrogenase I Chain F [Candidatus Pelagibacter ubique
HTCC1002]
gi|91717794|gb|EAS84444.1| NADH Dehydrogenase I Chain F [Candidatus Pelagibacter ubique
HTCC1002]
Length = 443
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 259/415 (62%), Positives = 329/415 (79%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L D+DRIF NLY ++ + RGDW T +++ KG +WI+ EVK S LRGRGGAGFP
Sbjct: 2 LNDKDRIFQNLYNDKGSDVESSKNRGDWVDTAEIIKKGREWIIEEVKSSELRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSF PK RP YLV+N DESEPGTCKDR+I+R +P KL+EGCLIA ++A
Sbjct: 62 TGLKWSFAPKELGSRPHYLVINGDESEPGTCKDRDILRFEPQKLIEGCLIASYAVQAHVC 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGEY + + L++A EAY L+GKNA G+G+D D++IHYGAGAYICGEETALLE
Sbjct: 122 YIYIRGEYFIDGQKLQKAIDEAYEKKLIGKNASGTGWDLDIYIHYGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G+PRLKPPFPA GLYGCPT + NVET+AV PTILR+G WFAS G+ N+GTK
Sbjct: 182 SIEGKKGQPRLKPPFPALIGLYGCPTIINNVETIAVVPTILRKGGKWFASLGKAKNTGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SG+VNKPC VEEEMSI LKELI+ H GGV GGWDNL AVIPGGSS+P++PK C+
Sbjct: 242 IFCISGNVNKPCNVEEEMSISLKELIEVHAGGVIGGWDNLQAVIPGGSSMPIIPKKTCET 301
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+ MD+D+L A +SGLGTA ++V++ D++ +AR++ FYKHESCGQCTPCREG+GW+W
Sbjct: 302 LTMDFDSLVAEKSGLGTAGIVVINNDQDIIKCMARIARFYKHESCGQCTPCREGSGWMWR 361
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
++ER+ G A +E++ML +VT QI GHTICA G+ ++WPVQGL+RHFR E+E+R
Sbjct: 362 MLERMAKGEASKDEVEMLGDVTNQIAGHTICAFGEGSSWPVQGLLRHFRKEIEKR 416
>gi|197105262|ref|YP_002130639.1| NADH dehydrogenase I subunit F [Phenylobacterium zucineum HLK1]
gi|196478682|gb|ACG78210.1| NADH dehydrogenase I, F subunit [Phenylobacterium zucineum HLK1]
Length = 437
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/425 (63%), Positives = 332/425 (78%), Gaps = 1/425 (0%)
Query: 56 GGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAG 115
G L D+DRIF NLYG+HD L+GA RG W+ TKD+V + +WI +++K SGLRGRGGAG
Sbjct: 3 GILADKDRIFLNLYGLHDWGLEGAKARGAWNGTKDIVAQSPEWICDQIKASGLRGRGGAG 62
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
FP+GLKW+FMPK RP YLVVNADESEPG CKDREI+R+DPH L+EGCLIA +RA
Sbjct: 63 FPTGLKWTFMPKQESERPHYLVVNADESEPGACKDREILRNDPHLLIEGCLIACRAIRAH 122
Query: 176 AAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETAL 235
AYIYIRGEYV+ER+ L A Q+AY A L+G G+D DV I +G GAYICG+ETAL
Sbjct: 123 TAYIYIRGEYVHERERLTAAIQQAYDAKLIGPGNI-HGWDCDVRIQHGGGAYICGDETAL 181
Query: 236 LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSG 295
+ESLEGK+G+PRLKPPFPA AG++G PTT+ NVE+++V TILRRG DWFA FG + ++G
Sbjct: 182 MESLEGKKGQPRLKPPFPAGAGIWGAPTTINNVESISVVGTILRRGADWFAGFGTEKSTG 241
Query: 296 TKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHIC 355
TKLF SGHVNKPC VE+ + IP+++LI+ H GGVRGGW NL AVIPGG SV ++P H
Sbjct: 242 TKLFAASGHVNKPCVVEDAVGIPVRQLIEEHFGGVRGGWGNLKAVIPGGISVRMIPAHEA 301
Query: 356 DDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWL 415
++ +M Y+ L+A SGLGT +IV DK D+V AIAR SYFYKHESCGQCTPCREGTGW+
Sbjct: 302 EEAVMTYEDLQARGSGLGTGTMIVFDKDADLVKAIARASYFYKHESCGQCTPCREGTGWM 361
Query: 416 WMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
W +MER+ G A++ EID+L +V Q+EGHTIC LGDAAAWP+QGL RHFR E+E RI
Sbjct: 362 WRVMERMVTGEAEMSEIDLLLDVASQVEGHTICGLGDAAAWPIQGLFRHFRHEVEERITS 421
Query: 476 HAERE 480
+ R+
Sbjct: 422 YRARK 426
>gi|358335133|dbj|GAA36090.2| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Clonorchis
sinensis]
Length = 373
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/356 (76%), Positives = 300/356 (84%)
Query: 120 LKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYI 179
+KWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPH L+EGCLIAG M A AAYI
Sbjct: 1 MKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGRAMGACAAYI 60
Query: 180 YIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESL 239
YIRGE+ NE NL+ A +EAY AG LGKNACGSGYDFDV++H GAGAYICGEETAL+ES+
Sbjct: 61 YIRGEFYNEASNLQLAIREAYDAGYLGKNACGSGYDFDVYVHRGAGAYICGEETALIESI 120
Query: 240 EGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLF 299
EGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAVSPTI RRG +WFASFGR+ N GTKLF
Sbjct: 121 EGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVSPTICRRGGEWFASFGRERNRGTKLF 180
Query: 300 CVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVL 359
+SGHVN PCTVEEEMSIPLK+LI+RH GGV GGWDNLLAVIPGGSSVPL+PK +C VL
Sbjct: 181 NISGHVNNPCTVEEEMSIPLKDLIERHAGGVIGGWDNLLAVIPGGSSVPLIPKDVCSTVL 240
Query: 360 MDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIM 419
MD+D+L +SGLGTAAVIVM+KS DVV I RL FY+HESCGQCTPCREG WL I
Sbjct: 241 MDFDSLIEAKSGLGTAAVIVMNKSADVVRCIHRLMQFYEHESCGQCTPCREGCRWLRQIT 300
Query: 420 ERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
R G A EIDML E++KQ+EGHTICAL D AAWPVQGLIRHFRPELE R ++
Sbjct: 301 GRFVQGKADKREIDMLWEISKQMEGHTICALADGAAWPVQGLIRHFRPELEARFEK 356
>gi|335281389|ref|XP_003353787.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial-like [Sus scrofa]
Length = 363
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/353 (75%), Positives = 301/353 (85%)
Query: 125 MPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGE 184
M K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G M A AAYIYIRGE
Sbjct: 1 MNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGE 60
Query: 185 YVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQG 244
+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQG
Sbjct: 61 FYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQG 120
Query: 245 KPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGH 304
KPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFGR+ NSGTKLF +SGH
Sbjct: 121 KPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGRERNSGTKLFNISGH 180
Query: 305 VNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDA 364
VN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DA
Sbjct: 181 VNHPCTVEEEMSVPLKELIEKHAGGVIGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDA 240
Query: 365 LKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKV 424
L Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCREG W+ +M R
Sbjct: 241 LVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVK 300
Query: 425 GNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R+++ A
Sbjct: 301 GDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQQFA 353
>gi|194374217|dbj|BAG57004.1| unnamed protein product [Homo sapiens]
gi|221045632|dbj|BAH14493.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/350 (76%), Positives = 298/350 (85%)
Query: 125 MPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGE 184
M K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G M A AAYIYIRGE
Sbjct: 1 MNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGE 60
Query: 185 YVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQG 244
+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQG
Sbjct: 61 FYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQG 120
Query: 245 KPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGH 304
KPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ NSGTKLF +SGH
Sbjct: 121 KPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGH 180
Query: 305 VNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDA 364
VN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DA
Sbjct: 181 VNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDA 240
Query: 365 LKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKV 424
L Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCREG W+ +M R
Sbjct: 241 LVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVR 300
Query: 425 GNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++
Sbjct: 301 GDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQ 350
>gi|7684616|gb|AAF08194.2|AF146339_1 NADH:ubiquinone oxidoreductase 51 kDa subunit [Yarrowia lipolytica]
Length = 379
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 261/343 (76%), Positives = 301/343 (87%)
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG M A+AAYIYIRGE+ NE L
Sbjct: 3 PRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLLAGRAMNATAAYIYIRGEFYNEAAVL 62
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAYAAGL+GK+ACGSGYDFDV+IH G GAY+CGEET+L+ESLEGK GKPRLKPPF
Sbjct: 63 QTAINEAYAAGLIGKDACGSGYDFDVYIHRGMGAYVCGEETSLIESLEGKAGKPRLKPPF 122
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA GL+G P+TVTNVETVAV+PTILRRG DWFASFGR+ NSGTKLFC+SG+VN+PCTVE
Sbjct: 123 PAGVGLFGRPSTVTNVETVAVAPTILRRGGDWFASFGRERNSGTKLFCISGNVNEPCTVE 182
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPL+EL+++HCGG++GGWDNLL VIPGG SVP+LPK+IC+DVLMD+DALK VQSGL
Sbjct: 183 EEMSIPLRELLEKHCGGIKGGWDNLLGVIPGGCSVPILPKNICEDVLMDFDALKDVQSGL 242
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIV++K DV+ AI R + FYKHESCGQCTPCREGT WL M+R + G AK EI
Sbjct: 243 GTAAVIVINKQQDVIRAIQRFAAFYKHESCGQCTPCREGTTWLLKAMDRFRTGQAKEREI 302
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
DML E+TK IEGHTICALGDAAAWP+QGLIR+FRPE+E R+K+
Sbjct: 303 DMLYELTKDIEGHTICALGDAAAWPIQGLIRNFRPEMETRMKK 345
>gi|332249694|ref|XP_003273992.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 1 [Nomascus leucogenys]
gi|332249698|ref|XP_003273994.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial isoform 3 [Nomascus leucogenys]
Length = 363
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/349 (75%), Positives = 296/349 (84%)
Query: 125 MPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGE 184
M K S GRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G M A AAYIYIRGE
Sbjct: 1 MNKPSYGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGE 60
Query: 185 YVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQG 244
+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQG
Sbjct: 61 FYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQG 120
Query: 245 KPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGH 304
KPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ NSGTKLF +SGH
Sbjct: 121 KPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGH 180
Query: 305 VNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDA 364
VN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DA
Sbjct: 181 VNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDA 240
Query: 365 LKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKV 424
L Q+GLGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCREG W+ +M R
Sbjct: 241 LVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVR 300
Query: 425 GNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R+
Sbjct: 301 GDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERM 349
>gi|88608878|ref|YP_506590.1| NADH dehydrogenase I subunit F [Neorickettsia sennetsu str.
Miyayama]
gi|88601047|gb|ABD46515.1| NADH dehydrogenase I, F subunit [Neorickettsia sennetsu str.
Miyayama]
Length = 413
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/418 (63%), Positives = 323/418 (77%), Gaps = 8/418 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK EDRIF+N+ L A++RGDW TK + K +WIV E+KKSGLRGRGGAGFP
Sbjct: 2 LKPEDRIFSNIQKREGITLSEALRRGDWKDTKKFLDKEPEWIVEEIKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSD-GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK + G+PSYLVVNADESEPGTCKDR+I+R +PHKL+EG ++A MR
Sbjct: 62 TGIKWSFMPKEKEAGKPSYLVVNADESEPGTCKDRDIIRFEPHKLIEGIVLASHAMRIDV 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
+YIYIRGE+ NE LE+ QEA A L+ + + +H GAGAYICGEETALL
Sbjct: 122 SYIYIRGEFYNESLVLEKVIQEAMDAHLIPEQ-------LKIFVHRGAGAYICGEETALL 174
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G PR+KPPFPA GLYG PTT+ NVE++A PTIL RG DWFA+ G KN+ GT
Sbjct: 175 ESLEGKRGMPRMKPPFPAGCGLYGKPTTINNVESIASVPTILSRGSDWFANLGVKNSCGT 234
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVNKPC VEE + IPLK LI+ + GGV GGWDNLLAVIPGGSSVP++ K + +
Sbjct: 235 KIFCISGHVNKPCNVEEALGIPLKFLIEEYAGGVIGGWDNLLAVIPGGSSVPMITKEVAE 294
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
V MD+D+L+AV S LGT +IVM+K TD++ AI RLS+FY HESCGQCTPCREGTGWLW
Sbjct: 295 TVTMDFDSLRAVGSSLGTGGIIVMNKETDIIRAIERLSHFYMHESCGQCTPCREGTGWLW 354
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
IM++L G K ++D L ++TKQIEG+TICALGDAAAWP+QGLI++FR E+E R K
Sbjct: 355 SIMKQLSEGKGKKSDVDFLLQLTKQIEGNTICALGDAAAWPIQGLIKNFRDEIEARQK 412
>gi|254797065|ref|YP_003081903.1| NADH dehydrogenase I subunit F [Neorickettsia risticii str.
Illinois]
gi|254590311|gb|ACT69673.1| NADH oxidoreductase (quinone), f subunit [Neorickettsia risticii
str. Illinois]
Length = 413
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 261/418 (62%), Positives = 323/418 (77%), Gaps = 8/418 (1%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK EDRIF+N+ L A++RGDW TK + K +WI+ E+KKSGLRGRGGAGFP
Sbjct: 2 LKPEDRIFSNIQKRESITLSEALRRGDWKDTKKFLDKEPEWIIEEIKKSGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSD-GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
+G+KWSFMPK + G+PSYLVVNADESEPGTCKDR+I+R +PHKL+EG ++A MR
Sbjct: 62 TGIKWSFMPKEKEAGKPSYLVVNADESEPGTCKDRDIIRFEPHKLIEGIVLASHAMRIDV 121
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
+YIYIRGE+ NE LE+ EA A L+ + + +H GAGAYICGEETALL
Sbjct: 122 SYIYIRGEFYNESLVLEKVIHEAMDAHLIPEQ-------LKIFVHRGAGAYICGEETALL 174
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G PR+KPPFPA GLYG PTT+ NVE++A PTIL RG DWFA+ G KN+ GT
Sbjct: 175 ESLEGKRGMPRMKPPFPAGCGLYGKPTTINNVESIASVPTILSRGSDWFANLGVKNSCGT 234
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+FC+SGHVNKPC VEE + IPLK LI+++ GGV GGWDNLLAVIPGGSSVP++ K + +
Sbjct: 235 KIFCISGHVNKPCNVEEALGIPLKFLIEKYAGGVIGGWDNLLAVIPGGSSVPMITKEVAE 294
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
V MD+D+L+AV S LGT +IVM+K TD++ AI RLS+FY HESCGQCTPCREGTGWLW
Sbjct: 295 TVTMDFDSLRAVGSALGTGGIIVMNKETDIIRAIERLSHFYMHESCGQCTPCREGTGWLW 354
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+M++L G K ++D L ++TKQIEG+TICALGDAAAWP+QGLI++FR E+E R K
Sbjct: 355 SLMKQLSEGKGKKSDVDFLLQLTKQIEGNTICALGDAAAWPIQGLIKNFRGEIEARQK 412
>gi|340777670|ref|ZP_08697613.1| NADH dehydrogenase I subunit F [Acetobacter aceti NBRC 14818]
Length = 383
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 250/359 (69%), Positives = 303/359 (84%)
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G+KWSFMPK P YLV+N DESEPGTCKDREI+RH+PHKL+E LIA M A A+
Sbjct: 1 TGVKWSFMPKGDGPAPRYLVINGDESEPGTCKDREILRHEPHKLIESALIASFAMGAHAS 60
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE+ NE ++L+ A EAY AGLLGKNA G+G+DFD ++H GAGAYICGEETALLE
Sbjct: 61 YIYVRGEFYNEARHLQIAIDEAYEAGLLGKNAAGTGWDFDFYLHRGAGAYICGEETALLE 120
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR+KPPFPA AGLYGCPTTV NVE++A + TILRRG WF+ GR NN+GTK
Sbjct: 121 SLEGKKGQPRMKPPFPAGAGLYGCPTTVNNVESIASASTILRRGAAWFSGLGRPNNAGTK 180
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
L +SGHVN PC EEE+ +P+KE+I++H GGVRGGWDNLLAVIPGG SVPLLPK IC+
Sbjct: 181 LMAISGHVNTPCVFEEELGVPMKEIIEKHGGGVRGGWDNLLAVIPGGCSVPLLPKDICET 240
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
VLMDYD+L+A +SGLGT +IVMDKSTD++ AIAR S F+KHESCGQCTPCREGTGW+
Sbjct: 241 VLMDYDSLRAERSGLGTGCMIVMDKSTDIIKAIARFSQFFKHESCGQCTPCREGTGWMMR 300
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+M R+ G A++EEIDML++VT+Q+EGHTICALGDAAAWP+QGLIRHFRP +E RI+++
Sbjct: 301 VMNRMVEGRAEIEEIDMLEQVTRQVEGHTICALGDAAAWPIQGLIRHFRPVMEERIRDY 359
>gi|14043258|gb|AAH07619.1| Unknown (protein for IMAGE:3355366), partial [Homo sapiens]
Length = 354
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/340 (76%), Positives = 291/340 (85%)
Query: 135 YLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLER 194
YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G M A AAYIYIRGE+ NE NL+
Sbjct: 2 YLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQV 61
Query: 195 ARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPA 254
A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA
Sbjct: 62 AIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPA 121
Query: 255 NAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEE 314
+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ NSGTKLF +SGHVN PCTVEEE
Sbjct: 122 DVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEE 181
Query: 315 MSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGT 374
MS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGT
Sbjct: 182 MSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGT 241
Query: 375 AAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDM 434
AAVIVMD+STD+V AIARL FYKHESCGQCTPCREG W+ +M R G+A+ EID
Sbjct: 242 AAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDS 301
Query: 435 LQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++
Sbjct: 302 LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQ 341
>gi|344230235|gb|EGV62120.1| NADH:ubiquinone oxidoreductase 51 kDa subunit [Candida tenuis ATCC
10573]
Length = 388
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/347 (73%), Positives = 297/347 (85%)
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVNADE EPGTCKDREI+R DPHKL+EGCL+AG GM A+AAYIYIRGE+ NE L
Sbjct: 12 PRYLVVNADEGEPGTCKDREIIRKDPHKLVEGCLLAGRGMNATAAYIYIRGEFYNEANVL 71
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAYAAG LGK+ACGSGY FDV+IH G GAY+CGEETAL+ES+EGK GKPRLKPPF
Sbjct: 72 QEAINEAYAAGFLGKDACGSGYPFDVYIHRGMGAYVCGEETALIESIEGKAGKPRLKPPF 131
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA GL+G PTTV NVETVAV+PTILRRG DWFA FGR+ N+GTKLFC+SGHVN+PCTVE
Sbjct: 132 PAGVGLFGRPTTVANVETVAVAPTILRRGGDWFAGFGRERNAGTKLFCISGHVNEPCTVE 191
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
EEMSIPLKEL+++HCGGV+GGWDNLL V+PGGSSVP++P +C++VLMDYDAL+ V SGL
Sbjct: 192 EEMSIPLKELLEKHCGGVKGGWDNLLGVVPGGSSVPIMPIDVCENVLMDYDALRDVGSGL 251
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
GTAAVIVM+K TD++ AI R S FYKHESCGQCTPCREGT WL +M+R +G AK EI
Sbjct: 252 GTAAVIVMNKQTDIIRAIQRFSAFYKHESCGQCTPCREGTTWLNSMMDRFVIGQAKEREI 311
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
DM+ E+TK+IEGHTICALGDAAAWPVQGLI+ FRP + RI + E+
Sbjct: 312 DMIYELTKEIEGHTICALGDAAAWPVQGLIKSFRPVMVDRINQFNEK 358
>gi|403301206|ref|XP_003941287.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
mitochondrial, partial [Saimiri boliviensis boliviensis]
Length = 358
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/332 (77%), Positives = 288/332 (86%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 27 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 146
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
+PK +C+ VLMD+DAL Q+GLGTAAVIVMD
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMD 358
>gi|395742367|ref|XP_003777743.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone]
flavoprotein 1, mitochondrial [Pongo abelii]
Length = 409
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/343 (74%), Positives = 289/343 (84%), Gaps = 1/343 (0%)
Query: 132 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKN 191
RP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G M A AAYIYIRGE+ NE N
Sbjct: 55 RPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASN 114
Query: 192 LERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPP 251
L+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPP
Sbjct: 115 LQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPP 174
Query: 252 FPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTV 311
FPA+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ NSGTKLF +SGHVN PCTV
Sbjct: 175 FPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNYPCTV 234
Query: 312 EEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSG 371
EEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+G
Sbjct: 235 EEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTG 294
Query: 372 LGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEE 431
LGTAAVIVMD+STD+V AIARL FYKHESCGQCTPCREG W+ +M R G+A+ E
Sbjct: 295 LGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDAQPAE 354
Query: 432 IDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
ID L E++KQIEGHTIC+ G WPVQGLIRHFRPELE R++
Sbjct: 355 IDSLWEISKQIEGHTICS-GXRGRWPVQGLIRHFRPELEERMQ 396
>gi|323649954|gb|ADX97063.1| mitochondrial NADH dehydrogenase flavoprotein 1 [Perca flavescens]
Length = 341
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/338 (74%), Positives = 288/338 (85%)
Query: 142 ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYA 201
E EPGTCKDREIMR+DPHKL+EGCL+AG M A AAYIYIRGE+ NE NL+ A EAYA
Sbjct: 1 EGEPGTCKDREIMRNDPHKLVEGCLVAGRAMGARAAYIYIRGEFYNESSNLQVAINEAYA 60
Query: 202 AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 261
AGL+GK+ CGSGYDFDV + GAGAYICGEETAL+ESLEGKQGKPRLKPPFPA+ G++GC
Sbjct: 61 AGLIGKDCCGSGYDFDVFVMRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGC 120
Query: 262 PTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKE 321
PTTV NVETVAV+PTI RRG WF FGR+ NSGTKLF +SGHVN PCTVEEEMSIPLK+
Sbjct: 121 PTTVANVETVAVAPTICRRGGPWFLGFGRERNSGTKLFNISGHVNNPCTVEEEMSIPLKD 180
Query: 322 LIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
LI+RH GGVRGGWDNLLAVIPGGSS PL+PK++C++VLMD+D L Q+GLGTAA+IVMD
Sbjct: 181 LIERHAGGVRGGWDNLLAVIPGGSSTPLIPKNVCEEVLMDFDGLIQAQTGLGTAALIVMD 240
Query: 382 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
KSTD++ AIARL FYKHESCGQCTPCREG W+ +M R G+A+ EIDM+ E++KQ
Sbjct: 241 KSTDIIRAIARLIEFYKHESCGQCTPCREGVDWMNNMMWRFVKGDARPSEIDMIWELSKQ 300
Query: 442 IEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 479
IEGHTICALGD AAWPVQGLIRHFRP +E RI EH ++
Sbjct: 301 IEGHTICALGDGAAWPVQGLIRHFRPVMESRIAEHQQQ 338
>gi|148701042|gb|EDL32989.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, isoform CRA_a [Mus
musculus]
Length = 334
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/326 (73%), Positives = 275/326 (84%)
Query: 154 MRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSG 213
MRHDPHKL+EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGS
Sbjct: 1 MRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSD 60
Query: 214 YDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAV 273
YDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV
Sbjct: 61 YDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAV 120
Query: 274 SPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGG 333
SPTI RRG WFA FGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GG
Sbjct: 121 SPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGG 180
Query: 334 WDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARL 393
WDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL
Sbjct: 181 WDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARL 240
Query: 394 SYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDA 453
FYKHESCGQCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD
Sbjct: 241 IEFYKHESCGQCTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDG 300
Query: 454 AAWPVQGLIRHFRPELERRIKEHAER 479
AAWPVQGLIRHFRPELE R++ A++
Sbjct: 301 AAWPVQGLIRHFRPELEDRMQRFAQQ 326
>gi|149061921|gb|EDM12344.1| NADH dehydrogenase (ubiquinone) flavoprotein 1, isoform CRA_b
[Rattus norvegicus]
Length = 334
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/321 (74%), Positives = 270/321 (84%)
Query: 154 MRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSG 213
MRHDPHKL+EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNAC S
Sbjct: 1 MRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACDSD 60
Query: 214 YDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAV 273
YDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAV
Sbjct: 61 YDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAV 120
Query: 274 SPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGG 333
SPTI RRG WFA FGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GG
Sbjct: 121 SPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVLGG 180
Query: 334 WDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARL 393
WDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVM+ STD+V AIARL
Sbjct: 181 WDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMNSSTDIVKAIARL 240
Query: 394 SYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDA 453
FYKHESCGQCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD
Sbjct: 241 IEFYKHESCGQCTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDG 300
Query: 454 AAWPVQGLIRHFRPELERRIK 474
AAWPVQGLIRHFRPELE R++
Sbjct: 301 AAWPVQGLIRHFRPELEDRMQ 321
>gi|449504070|ref|XP_004186265.1| PREDICTED: LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone]
flavoprotein 1, mitochondrial [Taeniopygia guttata]
Length = 472
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 274/332 (82%)
Query: 147 TCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLG 206
TC D ++ PH++ EG ++ M A AAYIYIRGE+ NE NL+ A +EAY AGLLG
Sbjct: 133 TCNDLGLLILVPHQVFEGHILYHRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLLG 192
Query: 207 KNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVT 266
+ACGSGY FDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV
Sbjct: 193 GDACGSGYAFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVA 252
Query: 267 NVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRH 326
NVETV+V+PTI RRG WFASFGR+ NSGTKLF +SGHVN PCTVE EMS+PLKELI++H
Sbjct: 253 NVETVSVAPTICRRGGAWFASFGRERNSGTKLFNISGHVNTPCTVEXEMSVPLKELIEKH 312
Query: 327 CGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDV 386
GGVRGGWDNLLAVIPGGSS PLLPK +C+ VLMD+D+L QSGLGTAAVIVMDKSTD+
Sbjct: 313 AGGVRGGWDNLLAVIPGGSSTPLLPKSVCETVLMDFDSLVQAQSGLGTAAVIVMDKSTDI 372
Query: 387 VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT 446
V AIARL FYKHESCGQCTPCREG W+ +M R G+A++ EID L E++KQIEGHT
Sbjct: 373 VKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDAQVAEIDALWEISKQIEGHT 432
Query: 447 ICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
ICALGD AAWPVQGLIRHFRPELE R++ ++E
Sbjct: 433 ICALGDGAAWPVQGLIRHFRPELEERMRRYSE 464
>gi|361128464|gb|EHL00399.1| putative NADH-ubiquinone oxidoreductase 51 kDa subunit,
mitochondrial [Glarea lozoyensis 74030]
Length = 362
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/372 (64%), Positives = 275/372 (73%), Gaps = 39/372 (10%)
Query: 112 GGAGFPSGLKWSFMPKV---SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
G GF S W V D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+A
Sbjct: 3 GDQGFRSTGTWWCWISVWDEMDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVA 62
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
G M +AAYIYIRGE+ +E L+RA QEAY GL+GKNACGSGYDFDV+IH G GAY+
Sbjct: 63 GRAMNCTAAYIYIRGEFYHEATVLQRAIQEAYKDGLIGKNACGSGYDFDVYIHRGMGAYV 122
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
C NVET+AV+PTI RRG WFA F
Sbjct: 123 C------------------------------------ANVETIAVAPTICRRGGSWFAGF 146
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
GR+ N+GTKLFC+SGHVN P TVEEEMSIPL+ELID+HCGGVRGGWDNL A+IPGGSS P
Sbjct: 147 GRERNAGTKLFCISGHVNNPVTVEEEMSIPLRELIDKHCGGVRGGWDNLKAIIPGGSSTP 206
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
+LPK ICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS+FY+HESCGQCTPC
Sbjct: 207 ILPKEICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFYRHESCGQCTPC 266
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
REG+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPE
Sbjct: 267 REGSKWTEQIMKRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPE 326
Query: 469 LERRIKEHAERE 480
LE R+K+ E+E
Sbjct: 327 LEARMKDFKEKE 338
>gi|123476595|ref|XP_001321469.1| hydrogenase chain [Trichomonas vaginalis G3]
gi|55793663|gb|AAV65812.1| hydrogenosomal NADH dehydrogenase 51 kDa subunit [Trichomonas
vaginalis]
gi|121904296|gb|EAY09246.1| hydrogenase chain, putative [Trichomonas vaginalis G3]
Length = 429
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/414 (56%), Positives = 309/414 (74%), Gaps = 3/414 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L +DRIF NL+G L A KRGDW++T++L+ KG ++I+NEVKKS +RGRGGAGF
Sbjct: 14 LDPKDRIFPNLFGDEGADLASAQKRGDWNQTEELIKKGKEFILNEVKKSEIRGRGGAGFS 73
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+G KWSF+PK S G P YL +NADE EPGTCKDR+I+ ++PHKL+EG L+A + A A
Sbjct: 74 TGQKWSFVPKPS-GIPHYLCINADEGEPGTCKDRQILTNEPHKLVEGALLASYTIHAHTA 132
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
Y+Y+RGE+ +E L++A EAYAAGL+GKN G+DFD++IH GAGAY+CGEETALL
Sbjct: 133 YVYVRGEFRHEIACLQKAIDEAYAAGLIGKNN-KFGWDFDMYIHSGAGAYVCGEETALLN 191
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK G+PR KPP+PA GL+ PT + NVET++ PTI +RG DWF+S G K + GTK
Sbjct: 192 SIEGKAGRPRFKPPYPAAKGLFQKPTIINNVETISSVPTICKRGGDWFSSIGIKGSKGTK 251
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
++ +SGHVN PC VEE M IP+K+LI+++ GGVRGGWDNLL +IPGG S P+L K C+
Sbjct: 252 IYAISGHVNHPCVVEEAMGIPIKDLINKYAGGVRGGWDNLLCLIPGGLSCPILTKEQCET 311
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
+M Y+ L A+ S LGT A+IVMDKST++ +A R+S+FY HESCGQC PCREGT L
Sbjct: 312 AVMGYNELSAMGSALGTGAIIVMDKSTNLYEAFRRVSHFYMHESCGQCGPCREGTAKLSD 371
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
IM++ G A ++ ML++V Q + ICAL A++ P++GL++ FRPELE+
Sbjct: 372 IMDKFAEGKATKHDLLMLKKVAYQTS-NCICALAGASSDPIKGLLKQFRPELEK 424
>gi|226486988|emb|CAX75359.1| NADH dehydrogenase (ubiquinone) flavoprotein 1 [Schistosoma
japonicum]
Length = 353
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/316 (72%), Positives = 264/316 (83%), Gaps = 1/316 (0%)
Query: 161 LLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHI 220
LL+G +IAG M A+ AYIYIRGE+ NE N++ A +EAY AG LGKNACG+G++FDV++
Sbjct: 23 LLKG-VIAGKAMGANVAYIYIRGEFYNEASNMQLAIKEAYEAGFLGKNACGTGFNFDVYM 81
Query: 221 HYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRR 280
H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTVTNVETVAVSPTI RR
Sbjct: 82 HRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVSPTICRR 141
Query: 281 GPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAV 340
G DWFASFGR+ N GTKLF +SGHVN PCTVEEEMSIP+++LI+RH GGV GGWDNLLAV
Sbjct: 142 GGDWFASFGRERNRGTKLFNISGHVNNPCTVEEEMSIPMRDLIERHAGGVIGGWDNLLAV 201
Query: 341 IPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHE 400
IPGGSS PLLPK IC VLMD+DAL SGLGTAA+IVM++S DVV+ I+RL FY+HE
Sbjct: 202 IPGGSSTPLLPKDICSTVLMDFDALVQANSGLGTAALIVMNRSADVVNCISRLIKFYEHE 261
Query: 401 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQG 460
SCGQCTPCREG W+ IM R GNA EIDM+ E++KQ+EG TICAL D AAWPVQG
Sbjct: 262 SCGQCTPCREGCRWMGQIMSRFVKGNANKSEIDMIWEISKQMEGRTICALADGAAWPVQG 321
Query: 461 LIRHFRPELERRIKEH 476
LIRHFRPELE R +H
Sbjct: 322 LIRHFRPELEARFAKH 337
>gi|307942122|ref|ZP_07657473.1| NADH-quinone oxidoreductase subunit f 1 [Roseibium sp. TrichSKD4]
gi|307774408|gb|EFO33618.1| NADH-quinone oxidoreductase subunit f 1 [Roseibium sp. TrichSKD4]
Length = 319
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/293 (74%), Positives = 257/293 (87%), Gaps = 1/293 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LKD+DRIFTN+YG++D L+GA KRG W TK L+ KG DWI++E+K SGLRGRGGAGFP
Sbjct: 2 LKDQDRIFTNIYGLNDWGLEGAKKRGQWDDTKALLDKGRDWIIDEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP+YLVVNADESEPGTCKDREI+RHDPH L+EGCL+AG M A AA
Sbjct: 62 TGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREILRHDPHTLVEGCLVAGFAMGAIAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGE++ ER+ L+ A +AY AGL+GKN +GYDFD+++H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEFIRERERLQAAIDQAYDAGLIGKNN-KNGYDFDIYVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WFA G+ NN+GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGGAWFAGLGKPNNTGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL 350
LFC+SGHVN+PCTVEEE+ IP +ELIDRHCGG+RGGWDN LAVIPGGSSVP L
Sbjct: 241 LFCISGHVNQPCTVEEELGIPFRELIDRHCGGIRGGWDNFLAVIPGGSSVPCL 293
>gi|58697052|ref|ZP_00372511.1| NADH dehydrogenase I chain F [Wolbachia endosymbiont of Drosophila
simulans]
gi|58536680|gb|EAL59972.1| NADH dehydrogenase I chain F [Wolbachia endosymbiont of Drosophila
simulans]
Length = 340
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 267/324 (82%), Gaps = 2/324 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
LK++D+IFTNL G P L+GA KRG W +TK+L+ G++ I++EVKKSGLRGRGGAGF
Sbjct: 19 LKEQDKIFTNLNGKETPLLEGAKKRGGWQKTKELLDLGSEKIIDEVKKSGLRGRGGAGFS 78
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK + +YLVVNADESEPGTCKDR+I+R++PHKLLEG L+A + AS A
Sbjct: 79 TGLKWSFMPK--NLPKAYLVVNADESEPGTCKDRDILRYEPHKLLEGILLASRAISASVA 136
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIYIRGE+ NE L++A +EAY L+GKNAC SGYD DV IH GAGAYICGEETA LE
Sbjct: 137 YIYIRGEFYNEYLVLKKALEEAYKENLIGKNACKSGYDLDVFIHRGAGAYICGEETAQLE 196
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
S+EGK+G PR+KPPFPA GL+GCPTT+ NVET+A+ P IL RG +WF S G+ NN+GTK
Sbjct: 197 SIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILNRGGEWFTSLGKPNNTGTK 256
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
+FC+SGHVN PC VEEE+ IPL+ELI+++ GGVRGGWDNLLAVIPGGSS PL+PK ICD
Sbjct: 257 VFCISGHVNNPCNVEEELGIPLRELIEKYAGGVRGGWDNLLAVIPGGSSAPLIPKSICDT 316
Query: 358 VLMDYDALKAVQSGLGTAAVIVMD 381
+ MD+D+L+ QSGLGTAAVIVMD
Sbjct: 317 IEMDFDSLRTAQSGLGTAAVIVMD 340
>gi|117926904|ref|YP_867521.1| NADH-quinone oxidoreductase subunit F [Magnetococcus marinus MC-1]
gi|117610660|gb|ABK46115.1| NADH dehydrogenase subunit F [Magnetococcus marinus MC-1]
Length = 424
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/411 (59%), Positives = 297/411 (72%), Gaps = 1/411 (0%)
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWS 123
+F N++ L A ++G + R + + + I+ EVK +GLRGRGGAGFP+GLKWS
Sbjct: 8 LFKNIHIQGQNTLAVAQQQGAYKRMEKALGMSGEEIIQEVKSAGLRGRGGAGFPAGLKWS 67
Query: 124 FMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRG 183
F+PK D RP YLV NADE EPGTCKDR++MR DPH L+EG +IAG + + YIYIRG
Sbjct: 68 FIPK-DDPRPKYLVCNADEGEPGTCKDRDLMRFDPHLLIEGMIIAGYAVNSKQGYIYIRG 126
Query: 184 EYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQ 243
E+ E + LE A EAYAA LLGKN G G DFD+ +H GAGAY+CGEE+ALL SLEG++
Sbjct: 127 EFYREAEVLEAAVAEAYAANLLGKNILGKGVDFDLAVHRGAGAYVCGEESALLNSLEGEK 186
Query: 244 GKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSG 303
G+PRLKPPFPAN GLYGCPT + NVET+ P IL +G W++ G + +SGTKLF VSG
Sbjct: 187 GQPRLKPPFPANVGLYGCPTVINNVETLCAVPAILEKGGAWYSKLGVEKSSGTKLFSVSG 246
Query: 304 HVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYD 363
HVNKP E E+ IPLK LI+ + GGVRGGW+NL VIPGGSS P+L C+ +LM Y+
Sbjct: 247 HVNKPGNYEVELGIPLKSLINDYAGGVRGGWENLKGVIPGGSSTPVLIPEQCETILMSYE 306
Query: 364 ALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLK 423
AL S LG +VIVMDKST +V AIARLS FY+HESCGQCTPCREGTGWL IM+R++
Sbjct: 307 ALAGAGSMLGAGSVIVMDKSTCIVKAIARLSKFYRHESCGQCTPCREGTGWLAQIMDRIE 366
Query: 424 VGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
G + +ID+L V I+G TICALGDAAA PV G IRHFR E E +K
Sbjct: 367 TGQGREGDIDLLLSVCSNIQGKTICALGDAAAMPVVGAIRHFRDEFEYHVK 417
>gi|429853789|gb|ELA28838.1| nadh-ubiquinone oxidoreductase 51 kda subunit, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 385
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/390 (60%), Positives = 266/390 (68%), Gaps = 31/390 (7%)
Query: 55 FGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGA 114
+GGLKD+DRIF NLYG P L A K GDWH+TK+++LKG DWI++EVK SGLRGRGGA
Sbjct: 24 YGGLKDQDRIFQNLYGRLPPSLASAKKMGDWHKTKEIILKGHDWIISEVKASGLRGRGGA 83
Query: 115 GFPSGLKWSFMPKVS---DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GFPSGLKWSFM D +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG
Sbjct: 84 GFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMRKDPHKLIEGCLVAGRA 143
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M A+AAYIYIRGE+V+E L+ A EAYA GL+GKNACGSGYDFDV IH GAGAY+CGE
Sbjct: 144 MNATAAYIYIRGEFVHEAAVLQNAINEAYADGLIGKNACGSGYDFDVFIHRGAGAYVCGE 203
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ET+L+ESLE P RG WFA FGR+
Sbjct: 204 ETSLIESLE---------------------------XXXXXXPPPPPPRGGSWFAGFGRE 236
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLFC+SGHVN P TVEEEMSIPL+ELID+HCGGVRGGWDNLLAVIPGG
Sbjct: 237 RNQGTKLFCISGHVNNPVTVEEEMSIPLRELIDKHCGGVRGGWDNLLAVIPGGXXXXXXX 296
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
IVMDKSTDVV AI+RLS+FY HESCGQCTPCREG
Sbjct: 297 XXX-XXXXXXXXXXXXXXXXXXXXXXIVMDKSTDVVRAISRLSHFYAHESCGQCTPCREG 355
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
+ W IM+R + G + EIDMLQE+TKQ
Sbjct: 356 SKWTDQIMKRFEKGRGRPREIDMLQELTKQ 385
>gi|324521898|gb|ADY47951.1| NADH dehydrogenase ubiquinone flavoprotein 1, partial [Ascaris
suum]
Length = 323
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/308 (70%), Positives = 245/308 (79%), Gaps = 5/308 (1%)
Query: 24 SVGLRSFSTQGASTA-----STPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKG 78
++G R+ G + +T PP PEK FG L D+DRIFTNLYG HD LKG
Sbjct: 7 AIGTRTLRRNGIGVSCTRAIATSAPPKTDQKPEKRTFGPLSDDDRIFTNLYGRHDYRLKG 66
Query: 79 AMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVV 138
A+ RGDW++TK+++LKG DWI+ E+ SGLRGRGGAGFPSG+KW FM + DGRP YLVV
Sbjct: 67 ALARGDWYKTKEIILKGQDWIIKEISASGLRGRGGAGFPSGMKWGFMKRPYDGRPKYLVV 126
Query: 139 NADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQE 198
NADE EPGTCKDREIMRHDPHKL+EGCLIAGV M A AAYIY RGE+ NE L+ A E
Sbjct: 127 NADEGEPGTCKDREIMRHDPHKLIEGCLIAGVAMGARAAYIYARGEFYNEACILQEAIHE 186
Query: 199 AYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGL 258
AY AG LGK+ CG+GY FDV +H GAGAYICGEETALLES+EGKQGKPRLKPPFPA+ GL
Sbjct: 187 AYKAGYLGKDCCGTGYSFDVFVHRGAGAYICGEETALLESIEGKQGKPRLKPPFPADIGL 246
Query: 259 YGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIP 318
+GCPTTVTNVETVAVSPTI RRG WFASFGR+ N GTKLFC+SGHV PCTVEEEMSIP
Sbjct: 247 FGCPTTVTNVETVAVSPTICRRGGAWFASFGRERNHGTKLFCISGHVVNPCTVEEEMSIP 306
Query: 319 LKELIDRH 326
LK+LI+RH
Sbjct: 307 LKDLIERH 314
>gi|297493964|gb|ADI40704.1| NADH dehydrogenase flavoprotein 1, 51kDa [Cynopterus sphinx]
gi|297493966|gb|ADI40705.1| NADH dehydrogenase flavoprotein 1, 51kDa [Rousettus leschenaultii]
Length = 275
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/269 (78%), Positives = 233/269 (86%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ EVK SGLR
Sbjct: 7 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKASGLR 66
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 67 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 126
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 127 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVLRGAGAYIC 186
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFG
Sbjct: 187 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 246
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIP 318
R+ NSGTKLF +SGHVN PCTVEEEMS+P
Sbjct: 247 RERNSGTKLFNISGHVNHPCTVEEEMSVP 275
>gi|114321114|ref|YP_742797.1| NADH-quinone oxidoreductase, F subunit [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227508|gb|ABI57307.1| NADH dehydrogenase subunit F [Alkalilimnicola ehrlichii MLHE-1]
Length = 425
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/388 (55%), Positives = 282/388 (72%), Gaps = 6/388 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ VKK+ LRGRGGAGFP+G+KW FMP+ + G+ Y+V N+DESEPGTCKDR+I+R +P
Sbjct: 43 IIETVKKANLRGRGGAGFPAGVKWGFMPRNAPGQ-KYIVCNSDESEPGTCKDRDILRFNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H L+EG IAG M A+ Y Y+RGE+ +E + +E+A +EA AGLLG+N GSG DF+
Sbjct: 102 HALVEGMAIAGYAMGATVGYNYLRGEFHHEPFERIEQAVREAREAGLLGRNIQGSGIDFE 161
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H H GAGAYICGEE+AL+ESLEGK+G+PR KPPFPA G+YG PTT+ N ET+A P+I
Sbjct: 162 LHNHIGAGAYICGEESALMESLEGKKGQPRYKPPFPAQVGVYGRPTTINNTETLASVPSI 221
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+R+G +WF G+ NN G K+FCVSGHV +P E + P K+L++ GGVRGG L
Sbjct: 222 MRKGSEWFLELGKPNNGGEKIFCVSGHVERPGNFEVPLGTPFKDLLEM-AGGVRGG-RKL 279
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSS+P++P MDYD L + S LG+ VIVMD++TD+V AI R+S FY
Sbjct: 280 KAVIPGGSSMPVVPGETMLQATMDYDGLAEIGSALGSGGVIVMDETTDMVKAILRISRFY 339
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGTGW+ ++ R+ G + E+I++L+ QI GHTICA G+AAAWP
Sbjct: 340 FAESCGQCTPCREGTGWMQRVLRRIVEGKGRHEDIELLEAAAGQIAGHTICAFGEAAAWP 399
Query: 458 VQGLIRHFRPELERRIKEHAERELLEAT 485
VQ ++HFR E E + EH +R ++EA
Sbjct: 400 VQSFLKHFRHEFEYYV-EH-KRSMVEAA 425
>gi|402589854|gb|EJW83785.1| Ndufv1 protein, partial [Wuchereria bancrofti]
Length = 292
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/275 (73%), Positives = 235/275 (85%)
Query: 202 AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 261
AG +GKN C +GY FDV +H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GC
Sbjct: 1 AGFIGKNCCDTGYGFDVFVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGC 60
Query: 262 PTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKE 321
PTTV N+ET+A +P I +RG W++SFGR+ N GTKL+C+SGHV PCTVEEEMSIPLKE
Sbjct: 61 PTTVNNIETIASAPAICKRGAKWYSSFGRERNHGTKLYCISGHVVNPCTVEEEMSIPLKE 120
Query: 322 LIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
LI+RHCGGV GGWDNL+A+IPGGSSVP++PK IC+ VLMDYDAL AVQ+GLGTAAVIVM+
Sbjct: 121 LIERHCGGVIGGWDNLMAIIPGGSSVPMIPKDICETVLMDYDALVAVQTGLGTAAVIVMN 180
Query: 382 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
K D+V IARLS+FY+HESCGQCTPCREGT WL +M R G AK EID L E++KQ
Sbjct: 181 KEVDIVKCIARLSHFYRHESCGQCTPCREGTKWLNSVMWRFVKGQAKSSEIDSLWEISKQ 240
Query: 442 IEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
IE HTICALGDAAAWPVQGLIRHFRPE+E RI ++
Sbjct: 241 IEAHTICALGDAAAWPVQGLIRHFRPEIEHRISDY 275
>gi|297493960|gb|ADI40702.1| NADH dehydrogenase flavoprotein 1, 51kDa [Scotophilus kuhlii]
Length = 275
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/269 (77%), Positives = 233/269 (86%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 7 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEIKTSGLR 66
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 67 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 126
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYIC
Sbjct: 127 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 186
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETV+VSPTI RRG WFASFG
Sbjct: 187 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVSVSPTICRRGGAWFASFG 246
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIP 318
R+ NSGTKLF +SGHVN PCTVEEEMS+P
Sbjct: 247 RERNSGTKLFNISGHVNHPCTVEEEMSVP 275
>gi|394989148|ref|ZP_10381982.1| NADH-quinone oxidoreductase subunit F [Sulfuricella denitrificans
skB26]
gi|393791567|dbj|GAB71621.1| NADH-quinone oxidoreductase subunit F [Sulfuricella denitrificans
skB26]
Length = 421
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/378 (58%), Positives = 268/378 (70%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D I+ +VK S LRGRGGAGFP+GLKWSFMPK G YLV N+DE EPGT KDR+I+R
Sbjct: 41 DAIIEQVKLSALRGRGGAGFPTGLKWSFMPKNYPGD-KYLVCNSDEGEPGTFKDRDILRL 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG +I G + A A Y YI GE E + E A EA AAGLLGKN GSG+DF
Sbjct: 100 NPHELIEGMIIGGYTLGAKAGYNYIHGEIWAEYERFEEALDEARAAGLLGKNILGSGFDF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D+H H G GAYICGEETALLES+EGK+G+PR KPPFPA+ GLYG PTT+ N ET+A P
Sbjct: 160 DIHAHQGYGAYICGEETALLESIEGKKGQPRFKPPFPASFGLYGKPTTINNTETLASIPY 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I++ G F G+ NN GTK+F VSGHVN P E M P EL++ GGV+ G
Sbjct: 220 IIKHGGQKFLELGKPNNGGTKIFSVSGHVNNPGNFEIGMGTPFSELLEM-AGGVKDG-RK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSSVP+LP I D+ MDYD++ S LG +VIVMD + +V A+ RLSYF
Sbjct: 278 LKAVIPGGSSVPVLPGEIMMDLTMDYDSIAKAGSYLGAGSVIVMDDTVCMVRALERLSYF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL+ ++ R++ G +LE++D+L V I G TICALGDAAA
Sbjct: 338 YFEESCGQCTPCREGTGWLYRVIHRIEHGQGRLEDLDLLDSVAGNIMGRTICALGDAAAM 397
Query: 457 PVQGLIRHFRPELERRIK 474
PVQG+++HFR E E I+
Sbjct: 398 PVQGMLKHFRNEFEYHIQ 415
>gi|270158109|ref|ZP_06186766.1| NADH-quinone oxidoreductase F subunit [Legionella longbeachae
D-4968]
gi|289163626|ref|YP_003453764.1| NADH dehydrogenase I chain F [Legionella longbeachae NSW150]
gi|269990134|gb|EEZ96388.1| NADH-quinone oxidoreductase F subunit [Legionella longbeachae
D-4968]
gi|288856799|emb|CBJ10610.1| NADH dehydrogenase I chain F [Legionella longbeachae NSW150]
Length = 425
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/377 (56%), Positives = 274/377 (72%), Gaps = 3/377 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++E+K S LRGRGGAGFP+GLKWSFM + ++ Y+V N+DE EPGTCKDR+I+R +P
Sbjct: 45 IIDELKTSALRGRGGAGFPTGLKWSFMNR-NNPVQKYVVCNSDEGEPGTCKDRDILRFNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG M A+ Y YIRGE+ ++ E A +EAYAAGLLGKN GSG+DFD+
Sbjct: 104 HQLIEGMAIAGYTMGATVGYNYIRGEFWLPYEHTEMAIKEAYAAGLLGKNILGSGFDFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALL SLEGK+G+PR KPPFPAN GLYG PTT+ N ET A P I+
Sbjct: 164 YNHLGAGAYICGEETALLNSLEGKKGQPRFKPPFPANYGLYGKPTTINNTETFASVPVIM 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF G+ NN G K F VSGHVNKP E + P K L++ GGVR G +
Sbjct: 224 EKGGEWFLKLGKPNNGGAKCFSVSGHVNKPGNFEIPLGTPFKMLVEL-AGGVREG-RKIK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGG+S+P+LP + + MDYD+++ SGLG+ AVI+MD++T +VDA+ R++ FY
Sbjct: 282 AVIPGGTSMPVLPGDVMMGLDMDYDSIQKAGSGLGSGAVIIMDETTCMVDALYRIAEFYM 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGW+ ++ R+K G+ + +++ L V IEG TICALG+AAAWPV
Sbjct: 342 DESCGQCTPCREGTGWMVRLLHRIKAGHGEPGDVERLVNVANNIEGRTICALGEAAAWPV 401
Query: 459 QGLIRHFRPELERRIKE 475
Q I+HFR E E +K
Sbjct: 402 QSFIKHFRDEFEYFVKN 418
>gi|240276236|gb|EER39748.1| NADH-ubiquinone oxidoreductase 51 kDa subunit [Ajellomyces
capsulatus H143]
Length = 282
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/254 (79%), Positives = 227/254 (89%)
Query: 225 GAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDW 284
GAYICGEET+L+ESLEGK GKPRLKPPFPA GL+GCP+TVTNVETVAV+PTI RRG W
Sbjct: 2 GAYICGEETSLIESLEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVAPTICRRGGKW 61
Query: 285 FASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG 344
FASFGR+ N GTKLFC+SGHVN PCTVEEEMSIPL+ELI+RHCGGVRGGWDNLLAVIPGG
Sbjct: 62 FASFGRERNQGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWDNLLAVIPGG 121
Query: 345 SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQ 404
SS P+LPKHICDD LMD+DALK QSGLGTAAVIVMDKSTDVV AI+RLS FYKHESCGQ
Sbjct: 122 SSTPILPKHICDDQLMDFDALKDAQSGLGTAAVIVMDKSTDVVAAISRLSAFYKHESCGQ 181
Query: 405 CTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRH 464
CTPCREG+ W +M+R + G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRH
Sbjct: 182 CTPCREGSKWTMQMMQRFERGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRH 241
Query: 465 FRPELERRIKEHAE 478
FRPELE RI+++ +
Sbjct: 242 FRPELEARIRKYEQ 255
>gi|297493962|gb|ADI40703.1| NADH dehydrogenase flavoprotein 1, 51kDa [Miniopterus schreibersii]
Length = 275
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/269 (76%), Positives = 231/269 (85%)
Query: 50 PEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLR 109
P+KT FG LKDEDRIFTNLYG HD LKGA RGDW++TK+++LKG DWI+ E+K SGLR
Sbjct: 7 PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEIKTSGLR 66
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G
Sbjct: 67 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGG 126
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNAC SGYDFDV + GAGAYIC
Sbjct: 127 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACDSGYDFDVFVLRGAGAYIC 186
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETV+VSPTI RRG WFA FG
Sbjct: 187 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVSVSPTICRRGGAWFAGFG 246
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIP 318
R+ NSGTKLF +SGHVN PCTVEEEMS+P
Sbjct: 247 RERNSGTKLFNISGHVNHPCTVEEEMSVP 275
>gi|195486237|ref|XP_002091420.1| GE12249 [Drosophila yakuba]
gi|194177521|gb|EDW91132.1| GE12249 [Drosophila yakuba]
Length = 481
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/453 (48%), Positives = 285/453 (62%), Gaps = 9/453 (1%)
Query: 34 GASTASTPQPPPPPPPPE------KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
G S P PP P+ KT FG L D DR+F NLYG HD L+GA +RGDWHR
Sbjct: 28 GGSKKLGPDRPPITAAPKGYEPNCKTKFGPLNDCDRVFQNLYGRHDWRLQGACQRGDWHR 87
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR-PSYLVVNADESEPG 146
T DL+ +G +WI+ ++ KSGLRGRGGAGF +GLKW F+ + + P ++VN E EPG
Sbjct: 88 TADLLEQGPEWIMEQIGKSGLRGRGGAGFYAGLKWEFLRQTKSAKVPKMVIVNCAEGEPG 147
Query: 147 TCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLG 206
TCKDR+I+RH+PHKL+EG L+ GV M A +YIR + NE NL A EAY GLLG
Sbjct: 148 TCKDRDILRHEPHKLIEGILLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLG 207
Query: 207 KNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVT 266
+ CG+G FDV + G Y+CGEETA++ L GK G+PR +PPF G + P V
Sbjct: 208 DSVCGTGIKFDVMVQRG-DRYLCGEETAMINCLMGKLGRPRRRPPFLTEKGYFEHPCLVI 266
Query: 267 NVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRH 326
N E++AV PTILRRG W+A GR N+GTKL+C+SG VN PCTVEEEMSIPLK+LI+RH
Sbjct: 267 NAESIAVVPTILRRGSQWWAGLGRSYNTGTKLYCISGQVNNPCTVEEEMSIPLKDLIERH 326
Query: 327 CGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDV 386
GGV+GGWDNL AV PGG S PLL VLMD+D+L+ SG G AVIVM K D
Sbjct: 327 AGGVKGGWDNLAAVFPGGLSTPLLDPPTAGKVLMDFDSLQDAGSGFGCGAVIVMTKDCDP 386
Query: 387 VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT 446
+ + R F++ +C QC+ CR+G WL + R G EID + ++
Sbjct: 387 LAVMLRSIQFFEKHTCKQCSYCRDGAIWLPEMFARFVKGQTHPHEIDWTLVIADKMRNSK 446
Query: 447 -ICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
ICAL + + L+R F ++E R+ ++A+
Sbjct: 447 PICALAYSQVGVAESLVRMFSRQIEERLLKYAK 479
>gi|148244394|ref|YP_001219088.1| NADH dehydrogenase I chain F [Candidatus Vesicomyosocius okutanii
HA]
gi|146326221|dbj|BAF61364.1| NADH dehydrogenase I chain F [Candidatus Vesicomyosocius okutanii
HA]
Length = 422
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/386 (55%), Positives = 276/386 (71%), Gaps = 6/386 (1%)
Query: 92 VLKGA---DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTC 148
+LKG + I++E+K SGLRGRGGAGFP+GLKWSFMP+ SDG+ Y+V N+DE EPGTC
Sbjct: 32 ILKGELTPEQIIDELKLSGLRGRGGAGFPTGLKWSFMPRHSDGQ-KYVVCNSDEGEPGTC 90
Query: 149 KDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKN 208
KDR+I+R +PH ++EG I G M AS Y YIRGE++ K E A +EAY AGLLG+N
Sbjct: 91 KDRDILRFNPHAVIEGMAIGGFVMNASVGYNYIRGEFMEPFKRFESALEEAYKAGLLGQN 150
Query: 209 ACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNV 268
S +FD++ H GAGAYICGEETALLES+EGK+G+PR KPPFPAN GL+G PTT+ N
Sbjct: 151 INNSSINFDLYTHLGAGAYICGEETALLESIEGKKGQPRFKPPFPANVGLFGKPTTINNT 210
Query: 269 ETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCG 328
E+ A P ILR G WFA G +N+ G KLF VSGHV P E M I K+L++ G
Sbjct: 211 ESFASVPEILRCGGQWFADIGVENSGGCKLFSVSGHVTNPANFEVPMGISFKDLLE-MAG 269
Query: 329 GVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVD 388
G+R G L AVIPGGSS P+L I ++ MDYD ++ S LG +VIVM++ST +V+
Sbjct: 270 GMRDG-AKLKAVIPGGSSTPVLTAEIVMNMTMDYDGIEKAGSMLGAGSVIVMNESTCMVE 328
Query: 389 AIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTIC 448
+ RL++FY ESCGQCTPCREGTGWL+ +++R+ GN + +ID+L V +I G+TIC
Sbjct: 329 VLTRLAHFYYDESCGQCTPCREGTGWLYRVLKRIIDGNGRQGDIDLLLSVQNKIMGNTIC 388
Query: 449 ALGDAAAWPVQGLIRHFRPELERRIK 474
ALGDAAA PV+ +R+FR E E IK
Sbjct: 389 ALGDAAAMPVESFLRNFREEFEYYIK 414
>gi|386828045|ref|ZP_10115152.1| NADH-quinone oxidoreductase, F subunit [Beggiatoa alba B18LD]
gi|386428929|gb|EIJ42757.1| NADH-quinone oxidoreductase, F subunit [Beggiatoa alba B18LD]
Length = 429
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/383 (55%), Positives = 272/383 (71%), Gaps = 4/383 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+++VK SGLRGRGGAGF +GLKWSFMPK D + YLV N+DE EPGT KDR+I+R++P
Sbjct: 43 IIDQVKASGLRGRGGAGFSTGLKWSFMPKSPDIQ-KYLVCNSDEGEPGTFKDRDILRYNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H ++EG IA + A+ AY Y+RGE+ + E A QEAY AGLLGKN GSG D D+
Sbjct: 102 HAVIEGMAIAAYTIGATVAYNYMRGEFRESIERFEAALQEAYDAGLLGKNILGSGVDVDL 161
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H+GAGAYICGEETALLES+EGK+G+PR KPPFPA+ GL+G PTT+ N ET A PTIL
Sbjct: 162 YTHHGAGAYICGEETALLESIEGKKGQPRYKPPFPASYGLFGKPTTINNTETFASVPTIL 221
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R+G DWF G+ NN G+K+F +SGHVNKP E M P EL+ GG+R G L
Sbjct: 222 RKGADWFLGLGKPNNGGSKIFAISGHVNKPGNYEIPMGTPFSELLAM-AGGIRTG-HQLK 279
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVP+L + + MDYD++ S LG+ AVIVMD++TD+V + R+SYFY
Sbjct: 280 AVIPGGSSVPVLKGDVMMQLTMDYDSIAKAGSMLGSGAVIVMDETTDMVRVLDRISYFYY 339
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL ++ R+++G K E++++L + +I G TICALGDAA+ PV
Sbjct: 340 EESCGQCTPCREGTGWLHRVVHRIRIGQGKPEDLELLSNIANKIMGRTICALGDAASMPV 399
Query: 459 QGLIRHFRPELERRIKEHAEREL 481
+R F E + I EH L
Sbjct: 400 LSFVREFPEEFQYYI-EHGHSML 421
>gi|381156956|ref|ZP_09866190.1| NADH-quinone oxidoreductase, F subunit [Thiorhodovibrio sp. 970]
gi|380880819|gb|EIC22909.1| NADH-quinone oxidoreductase, F subunit [Thiorhodovibrio sp. 970]
Length = 432
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/387 (56%), Positives = 273/387 (70%), Gaps = 12/387 (3%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ E+K S LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDR+I+R++P
Sbjct: 48 IIQELKLSALRGRGGAGFPTGLKWSFMPRQAPGQ-KYIVCNSDEGEPGTCKDRDILRYNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG + A+ Y YIRGE+ A EAYAAGLLGKN GSG DFD+
Sbjct: 107 HQLIEGMAIAGYCIGATVGYNYIRGEFYEPIARFNAALDEAYAAGLLGKNVLGSGVDFDL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H H GAGAYICGEETALLES+EGK+G+PR KPPFPA AGL+G PTT+ N E++A P IL
Sbjct: 167 HTHLGAGAYICGEETALLESIEGKKGQPRYKPPFPAQAGLFGRPTTINNTESLASVPVIL 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WF GR NN G KLF VSGHV P E + P ++L+ GGV+GG + L
Sbjct: 227 EKGGQWFLDQGRPNNGGPKLFSVSGHVENPGNFEVPLGTPFRDLLAL-AGGVQGGRE-LK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVP++P HI V MDYD++ S LG+ AV+V+ + T +V +A LS+FY
Sbjct: 285 AVIPGGSSVPVVPGHIMMGVDMDYDSIAKAGSMLGSGAVVVIAEGTSMVKVLANLSHFYA 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCGQCTPCREGTGWL +++R+ G + ++I +L V +I G TICALGDAAA PV
Sbjct: 345 HESCGQCTPCREGTGWLARVLDRILKGQGRRQDISLLDSVAGRIGGRTICALGDAAAMPV 404
Query: 459 QGLIRHFRPELERRIKEHAERELLEAT 485
Q ++H+R E E EL+EAT
Sbjct: 405 QSFLKHYRHEFE---------ELIEAT 422
>gi|194754954|ref|XP_001959757.1| GF11875 [Drosophila ananassae]
gi|190621055|gb|EDV36579.1| GF11875 [Drosophila ananassae]
Length = 520
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/438 (50%), Positives = 284/438 (64%), Gaps = 3/438 (0%)
Query: 43 PPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNE 102
PP +KT FG LKD DRIF NLYG HD LKGA +RGDWH+T D++ G DW++++
Sbjct: 70 PPKGSLTNDKTCFGPLKDSDRIFQNLYGRHDWRLKGACQRGDWHKTGDILELGPDWMMDQ 129
Query: 103 VKKSGLRGRGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKL 161
+K+S LRGRGGAGF KW F+ +V S+ P LVVN E EPGTCKDREI+RH+PHKL
Sbjct: 130 IKQSALRGRGGAGFYCATKWEFLKQVKSEKVPKMLVVNCAEGEPGTCKDREILRHEPHKL 189
Query: 162 LEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIH 221
+EG L+AGV + A IYIR + NE NL A EAY GL+G ACG+ FD+ I
Sbjct: 190 IEGILLAGVTIGCGRAIIYIRNRFYNEACNLHYALAEAYHHGLVGDGACGTDIKFDIMIQ 249
Query: 222 YGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRG 281
G Y+CGEETA+L L G+ G+PR +PPF G + P V N E+++V PT+LRRG
Sbjct: 250 RG-DRYLCGEETAMLNCLMGELGRPRRRPPFLTEKGYFNHPCLVVNAESLSVLPTLLRRG 308
Query: 282 PDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVI 341
P W+ GR N+GTKLFC+SG VN PCTVEEEMS+P++E+I+ H GGV+GGW+NLLAV
Sbjct: 309 PCWWTGLGRSYNAGTKLFCISGEVNNPCTVEEEMSMPMREIIELHAGGVQGGWENLLAVF 368
Query: 342 PGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHES 401
PGG S LL V+MD+D L+A SGLG ++IVM K D + + R FY+ +
Sbjct: 369 PGGLSTALLGPEAAGGVMMDFDCLEAAGSGLGCGSIIVMSKKCDPLAIMHRAIEFYEEHT 428
Query: 402 CGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG-HTICALGDAAAWPVQG 460
C QCT CR+G WL + R G A EID + +I+ ICALG + A +
Sbjct: 429 CKQCTYCRDGAIWLPELFGRFATGQAHPHEIDWTSVIADKIKNSRPICALGVSQAITAES 488
Query: 461 LIRHFRPELERRIKEHAE 478
++R F ++ +RI + AE
Sbjct: 489 MVRMFSEQINQRIVKFAE 506
>gi|194882859|ref|XP_001975527.1| GG22361 [Drosophila erecta]
gi|190658714|gb|EDV55927.1| GG22361 [Drosophila erecta]
Length = 481
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/453 (49%), Positives = 283/453 (62%), Gaps = 9/453 (1%)
Query: 34 GASTASTPQPPPPPPPPE------KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHR 87
G S P PP P+ KT FG L D DR+F NLYG HD L+GA +RGDWHR
Sbjct: 28 GGSKKLGPDRPPVSKAPKGYEPNCKTKFGPLNDCDRVFQNLYGRHDWRLQGACQRGDWHR 87
Query: 88 TKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPG 146
T DL+ +G +W++ E+ K GLRGRGGAGF +GLKW F+ + S+ P L+VN E EPG
Sbjct: 88 TADLLEQGPEWMMKEISKCGLRGRGGAGFYAGLKWEFLRQTKSEKVPKMLIVNCAEGEPG 147
Query: 147 TCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLG 206
TCKDR+I+RH+PHKL+EG L+ GV M A +YIR + NE NL A EAY GLLG
Sbjct: 148 TCKDRDILRHEPHKLIEGILLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLG 207
Query: 207 KNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVT 266
+ACG+ FDV + G Y+CGEETAL+ L GK G+PR +PPF G + P V
Sbjct: 208 DSACGTDIKFDVMVQRG-DRYLCGEETALINCLMGKLGRPRRRPPFLTEKGYFEHPCLVV 266
Query: 267 NVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRH 326
N E++AV PTILRRG W+A GR N+GTKL+C+SG VN PCTVEEEMSIPLK+LI+RH
Sbjct: 267 NAESIAVVPTILRRGSQWWAGLGRSYNTGTKLYCISGQVNNPCTVEEEMSIPLKDLIERH 326
Query: 327 CGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDV 386
GGV+GGWD L AV PGG S PLL VLMD+D+L SG G AVIV+ K D
Sbjct: 327 AGGVKGGWDKLAAVFPGGLSTPLLDPSTAGKVLMDFDSLADAGSGFGCGAVIVISKDCDP 386
Query: 387 VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT 446
+ + R F++ +C QCT CR+G WL + R G EID + ++
Sbjct: 387 LAVMLRSIQFFEKHTCKQCTYCRDGAIWLPEMFARFVKGQTHPHEIDWTLVIADKMRNSK 446
Query: 447 -ICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
ICAL + + L+R F ++E R+ ++A+
Sbjct: 447 PICALAYSQVAVAESLVRMFSRQIEERLLKYAK 479
>gi|387128697|ref|YP_006297302.1| NADH-ubiquinone oxidoreductase subunit F [Methylophaga sp. JAM1]
gi|386275759|gb|AFI85657.1| NADH-ubiquinone oxidoreductase chain F [Methylophaga sp. JAM1]
Length = 432
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/378 (55%), Positives = 266/378 (70%), Gaps = 3/378 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ +K S LRGRGGAGFP+GLKWSFMP+ G Y+V N+DE EPGTCKDR+I+R++P
Sbjct: 44 IIETIKNSALRGRGGAGFPTGLKWSFMPRRMPGD-KYIVCNSDEGEPGTCKDRDILRYNP 102
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG +IAG + A Y YIRGE+ + E+A EA AG LGKN GSG++F++
Sbjct: 103 HQLIEGMIIAGYTIGAQRGYNYIRGEFFEPMERFEQALAEARQAGYLGKNILGSGFNFEL 162
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H H GAGAYICGEETALLESLEGK+G+PR KPPFPA GLYG PTT+ N ET+A P IL
Sbjct: 163 HAHPGAGAYICGEETALLESLEGKKGQPRYKPPFPAGYGLYGRPTTINNTETLASVPVIL 222
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+ G DWF G NN G K+FC++GHVNKP E + IP EL++ GGVR G + L
Sbjct: 223 QHGADWFHELGTPNNGGQKIFCMTGHVNKPGNYEVPLGIPFAELLEL-AGGVRNG-NKLK 280
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P++P M YD + S LG +VIVMD++T +V A+ R++YFY
Sbjct: 281 AVIPGGSSTPVVPAEAMMQTAMSYDGIGKAGSMLGAGSVIVMDETTCMVKALERIAYFYY 340
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ +++R++ G + E++D L +V I G+TICALGDAAA PV
Sbjct: 341 EESCGQCTPCREGTGWLYRVIKRIENGEGRQEDLDRLVDVANNINGNTICALGDAAAAPV 400
Query: 459 QGLIRHFRPELERRIKEH 476
I+HFR E + I H
Sbjct: 401 ISFIKHFRDEFQYHIDHH 418
>gi|256821520|ref|YP_003145483.1| NADH-quinone oxidoreductase subunit F [Kangiella koreensis DSM
16069]
gi|256795059|gb|ACV25715.1| NADH-quinone oxidoreductase, F subunit [Kangiella koreensis DSM
16069]
Length = 431
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/383 (55%), Positives = 271/383 (70%), Gaps = 4/383 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ E+K S LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGT KDR+I+R +P
Sbjct: 43 IIEELKLSALRGRGGAGFPTGLKWSFMPRHAPGQ-KYVVCNSDEGEPGTFKDRDILRFNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG I G M A+ Y Y+RGE+ E+A +EAY AGLLGKN GS DFD+
Sbjct: 102 HQLIEGMAIGGYVMGATVGYNYMRGEFYEPIDRFEQALKEAYKAGLLGKNILGSDVDFDL 161
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H H GAGAYICGEETALLESLEGK+G+PR KPPFPAN GLYG PT V N E+ A P IL
Sbjct: 162 HSHIGAGAYICGEETALLESLEGKKGQPRFKPPFPANYGLYGRPTNVNNTESYASVPVIL 221
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WF G++NN GTK+F VSGHVNKP E + P K+L+D GG++ G L
Sbjct: 222 DKGGKWFLELGKENNGGTKIFSVSGHVNKPGNYEIGLGTPFKDLLDM-AGGMKDG-KKLK 279
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP + D+ MDYDA+ S LG+ AVI+MD+ TD+V+ + R+++FY
Sbjct: 280 AVIPGGSSAPVLPADVMMDITMDYDAIGKAGSMLGSGAVIIMDEDTDMVEILGRIAHFYY 339
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGW+ ++ R+ G K ++ L E+ I G TICALGDAAA PV
Sbjct: 340 EESCGQCTPCREGTGWMSRMIHRIANGQGKQSDLKDLDEIAGNIMGRTICALGDAAAMPV 399
Query: 459 QGLIRHFRPELERRIKEH-AERE 480
Q I+ F+ E E +I++ AE+E
Sbjct: 400 QSFIKCFKQEFEAKIEQAVAEQE 422
>gi|218671274|ref|ZP_03520944.1| NADH dehydrogenase I subunit F [Rhizobium etli GR56]
Length = 290
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/285 (71%), Positives = 236/285 (82%), Gaps = 1/285 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 3 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKHILEKGRDWIINEMKASGLRGRGGAGFP 62
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC++A M A+AA
Sbjct: 63 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVVASFAMGANAA 122
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+ +H+GAGAYICGEETALLE
Sbjct: 123 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIFVHHGAGAYICGEETALLE 181
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 182 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSIGRPNNVGTK 241
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIP 342
LF +SGHVNKPCTVEEEM I +EL+DRH GG+RGGWD + P
Sbjct: 242 LFMLSGHVNKPCTVEEEMGITFRELVDRHAGGIRGGWDICSSSFP 286
>gi|24653819|ref|NP_725449.1| CG8102, isoform A [Drosophila melanogaster]
gi|7303085|gb|AAF58152.1| CG8102, isoform A [Drosophila melanogaster]
Length = 481
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/432 (50%), Positives = 278/432 (64%), Gaps = 3/432 (0%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
P KT FG L D DR+F NLYG HD L GA +RGDWHRT +L+ +G +WI+ +V KSGL
Sbjct: 49 PNCKTKFGPLDDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIMKQVSKSGL 108
Query: 109 RGRGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLI 167
RGRGGAGF +GLKW F+ + S+ P ++VN E EPGTCKDR+I+RH+PHKL+EG L+
Sbjct: 109 RGRGGAGFYAGLKWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDRDILRHEPHKLIEGILL 168
Query: 168 AGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAY 227
GV M A +YIR + NE NL A EAY GLLG + CG+G FDV + G Y
Sbjct: 169 VGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVMVQRG-DRY 227
Query: 228 ICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFAS 287
+CGEETA++ L GK G+PR +PPF G + P V N E++AV PTILRRG W+A
Sbjct: 228 LCGEETAMINCLMGKLGRPRRRPPFLTEKGYFEHPCLVINAESIAVVPTILRRGSQWWAG 287
Query: 288 FGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSV 347
GR N+GTKL+C+SG VN PCTVEEEMSIPLK+LI+RH GGV+GGWDNL AV PGG S
Sbjct: 288 LGRSYNTGTKLYCLSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGWDNLAAVFPGGLST 347
Query: 348 PLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTP 407
PLL VLMD+D+L SG G AVIVM K D + + R F++ +C QC+
Sbjct: 348 PLLDPSTAGKVLMDFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSY 407
Query: 408 CREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT-ICALGDAAAWPVQGLIRHFR 466
CR+G WL I R G EID + ++ ICAL + + L+R F
Sbjct: 408 CRDGAIWLPEIFARFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFS 467
Query: 467 PELERRIKEHAE 478
++E R+ ++A+
Sbjct: 468 RKIEERLLKYAK 479
>gi|220934167|ref|YP_002513066.1| NADH-quinone oxidoreductase subunit F [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219995477|gb|ACL72079.1| NADH-quinone oxidoreductase, F subunit [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 425
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/417 (52%), Positives = 292/417 (70%), Gaps = 7/417 (1%)
Query: 62 DRIFTNLYGMHDPF-LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPS 118
+RI +P+ L+ +K G + K ++ + + ++ EVKKS LRGRGGAGFP+
Sbjct: 2 NRICFTTLQFDEPWTLESYLKVGGYQAWKKILTEKMSQEDVIEEVKKSNLRGRGGAGFPT 61
Query: 119 GLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAY 178
GLKWSFMP+ + G+ Y+V N+DESEPGTCKDR+I+R +PH L+EG I G + A+ Y
Sbjct: 62 GLKWSFMPRNAPGQ-KYIVCNSDESEPGTCKDRDILRFNPHALVEGMAIGGYAIGATVGY 120
Query: 179 IYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
Y+RGE+++E + +A +EAY G LGK+ GSG DFD++ GAGAYICGEETALLE
Sbjct: 121 NYMRGEFMDEPYQRFAQAVREAYEQGFLGKDILGSGVDFDLYPTLGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PR KPPFPAN GLYG PTT+ N E+++ P+I+R G DWFA+ G + G K
Sbjct: 181 SLEGKKGQPRFKPPFPANFGLYGRPTTINNTESLSSIPSIIREGGDWFAALGIPKSGGEK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDD 357
LF VSGHVNKP E + P K+L++ GGV GG L AVIPGGSSVP++P +
Sbjct: 241 LFSVSGHVNKPGNFEIPLGTPFKDLLE-MAGGVLGG-RKLKAVIPGGSSVPVVPGDVMLT 298
Query: 358 VLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 417
MDYD++ S LG+ AVIVMD++TD+V A+ R+S FY ESCGQCTPCREGTGWL+
Sbjct: 299 ANMDYDSIAKAGSMLGSGAVIVMDETTDMVRALQRISRFYFSESCGQCTPCREGTGWLYR 358
Query: 418 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
++ R+ G + E+++ L +V +IEG TICALGDAAA PV+ ++HFR E E I+
Sbjct: 359 MLTRIVEGKGRPEDLERLDDVASKIEGRTICALGDAAAMPVRSFVKHFRHEFEYYIQ 415
>gi|430762382|ref|YP_007218239.1| NADH-ubiquinone oxidoreductase chain F [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430012006|gb|AGA34758.1| NADH-ubiquinone oxidoreductase chain F [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 426
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/377 (56%), Positives = 269/377 (71%), Gaps = 4/377 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVKKS LRGRGGAGFP+GLKWSFMP+ S G+ Y+V N+DESEPGTCKDR+I+R +P
Sbjct: 43 VIEEVKKSNLRGRGGAGFPTGLKWSFMPRNSPGQ-KYIVCNSDESEPGTCKDRDILRFNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H L+EG IAG + A+ Y Y+RGE+++E + A +EAY G LGK+ GSG DFD
Sbjct: 102 HALIEGMAIAGYAIGATVGYNYMRGEFIDEVYRRFSDALKEAYDQGFLGKDVLGSGVDFD 161
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H GAGAYICGEETALLESLEGK+G+PR KPPFPAN GLYG PTT+ N E++A P+I
Sbjct: 162 LHATLGAGAYICGEETALLESLEGKKGQPRFKPPFPANFGLYGRPTTINNTESLASIPSI 221
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
LR G DWFA G + G KLF VSGHVN+P E + P EL+D GGV G L
Sbjct: 222 LRNGGDWFAELGVPKSGGEKLFSVSGHVNRPGNYEVPLGTPFSELLDL-AGGVLDG-RRL 279
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSSVP++P MDYD++ S LG+ AVIVMD++TD+V + R+S FY
Sbjct: 280 KAVIPGGSSVPVVPGDAMMQANMDYDSIAKAGSMLGSGAVIVMDETTDMVQVLQRISRFY 339
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGTGW++ ++ R+ G + E+++ L +V +IEG TICALGDAAA P
Sbjct: 340 FSESCGQCTPCREGTGWMYRMLTRIVEGRGRPEDLERLDDVASKIEGRTICALGDAAAMP 399
Query: 458 VQGLIRHFRPELERRIK 474
V+ I+H+R E I+
Sbjct: 400 VRSFIKHYRHEFAHYIQ 416
>gi|160872482|ref|ZP_02062614.1| NADH oxidoreductase (quinone), f subunit [Rickettsiella grylli]
gi|159121281|gb|EDP46619.1| NADH oxidoreductase (quinone), f subunit [Rickettsiella grylli]
Length = 426
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 272/376 (72%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ E+K+S LRGRGGAGFP+GLKWSF+ + + G+ Y++ N+DE EPGTCKDR+I+R +P
Sbjct: 43 IIAELKRSCLRGRGGAGFPTGLKWSFITRNAPGQ-KYILCNSDEGEPGTCKDRDILRFNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG M A+ Y YIRGEY + E A EAY AG LG+N GSG+DF +
Sbjct: 102 HQLIEGMAIAGYVMGATVGYNYIRGEYDEPFERCETALAEAYEAGWLGENIIGSGFDFQL 161
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETAL+ESLEGK+G PR KPPFPAN GLYGCPTT+ N ET+A P IL
Sbjct: 162 YNHRGAGAYICGEETALMESLEGKKGFPRFKPPFPANYGLYGCPTTINNTETLASVPVIL 221
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
++G WF G+ NN G KLF V+GHVNKP E + IP KEL+ GG++ L
Sbjct: 222 QKGGQWFLELGKPNNGGCKLFSVTGHVNKPGNYEVPLGIPFKELLAL-AGGMKAN-RKLK 279
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+L + MDYD++ S LG+ AVIVMD++T +V + R+++FYK
Sbjct: 280 AVIPGGSSMPVLTAEAMWNTAMDYDSIIKAGSMLGSGAVIVMDETTCMVKVLTRIAHFYK 339
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGW+W ++ R++ G+A+ ++D+L+ V +I GHTICALGDAAA PV
Sbjct: 340 EESCGQCTPCREGTGWMWRVLHRIEQGHAQRSDLDLLESVAGRIMGHTICALGDAAAMPV 399
Query: 459 QGLIRHFRPELERRIK 474
Q I+HFR E I+
Sbjct: 400 QSFIKHFRSEFIEHIE 415
>gi|374263779|ref|ZP_09622326.1| NADH dehydrogenase I, F subunit [Legionella drancourtii LLAP12]
gi|363535901|gb|EHL29348.1| NADH dehydrogenase I, F subunit [Legionella drancourtii LLAP12]
Length = 425
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/376 (57%), Positives = 271/376 (72%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++E+K S LRGRGGAGFP+GLKWSFM + S + Y+V N+DE EPGTCKDREI+ +P
Sbjct: 45 IIDELKTSALRGRGGAGFPTGLKWSFMNRNSPVQ-KYVVCNSDEGEPGTCKDREILALNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG M +S Y YIRGE+ + E A +EAYAAGLLGKN GSG DFD+
Sbjct: 104 HQLIEGMAIAGYVMGSSVGYNYIRGEFWLPYERTEAALKEAYAAGLLGKNILGSGVDFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALL SLEGK+G+PR KPPFPAN GLYG PTT+ N ET A P I+
Sbjct: 164 YNHLGAGAYICGEETALLNSLEGKKGQPRFKPPFPANYGLYGKPTTINNTETFASVPVIM 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF G+ NN GTK F VSGHVNKP E + P K L++ GGV+G +
Sbjct: 224 EKGGEWFLKLGKPNNGGTKCFSVSGHVNKPGNFEIPLGTPFKTLLEL-AGGVKGD-RRIK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + + MDYD+++ SGLG+ AVI+MD++T +VDA+ R+S FY
Sbjct: 282 AVIPGGSSMPVLPGDVMMGLDMDYDSIQKAGSGLGSGAVIIMDETTCMVDALYRISEFYM 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL ++ R+K G+ + +I+ L V IEG TICALG+AAAWPV
Sbjct: 342 DESCGQCTPCREGTGWLVRLLHRIKEGHGEPGDIEKLVNVADNIEGRTICALGEAAAWPV 401
Query: 459 QGLIRHFRPELERRIK 474
Q ++HF E + IK
Sbjct: 402 QSFVKHFYNEFDYFIK 417
>gi|386815637|ref|ZP_10102855.1| NADH dehydrogenase subunit F [Thiothrix nivea DSM 5205]
gi|386420213|gb|EIJ34048.1| NADH dehydrogenase subunit F [Thiothrix nivea DSM 5205]
Length = 426
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/417 (52%), Positives = 286/417 (68%), Gaps = 7/417 (1%)
Query: 64 IFTNLYGMHDPFLKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLK 121
T +G L+ +K G + + ++ + A+ I+ E+K SGLRGRGGAGFP+G+K
Sbjct: 7 FITKQFGDQAHTLESYLKTGGYQAWRKILEEKTSAENIIEEIKDSGLRGRGGAGFPTGMK 66
Query: 122 WSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYI 181
WSFMP+ G+ Y+V N+DESEPGTCKDR+I+R +PH L+EG IAG + A+ Y Y+
Sbjct: 67 WSFMPRKMPGQ-KYIVCNSDESEPGTCKDRDILRFNPHALVEGMAIAGYSIGATVGYNYM 125
Query: 182 RGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
RGE+++E E+A +EAY GLLGKN GSG DFD+H GAGAY+CGEETALLESLE
Sbjct: 126 RGEFMDEPFIRFEQAVREAYELGLLGKNIQGSGVDFDLHGTLGAGAYVCGEETALLESLE 185
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GK+G+PR KPPFPA+ GLYG PTT+ N ET++ P ILR G WFA G KN+ G KLF
Sbjct: 186 GKKGQPRFKPPFPASFGLYGRPTTINNTETLSSIPIILRNGGKWFADMGVKNSGGEKLFS 245
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
+SGH+N P E M P EL+ GGVR G L AVIPGGSSVP+LP + + M
Sbjct: 246 MSGHLNNPGNFEIPMGTPFPELL-AMAGGVRNG-HKLKAVIPGGSSVPVLPGDVMMGLTM 303
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
DYD + S LG+ AVIVMD++TD+V + R+S FY ESCGQCTPCREGTGWL+ ++
Sbjct: 304 DYDTIAKAGSYLGSGAVIVMDETTDMVKVLQRISRFYFSESCGQCTPCREGTGWLYRMLT 363
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
R+ G K E++ L+E++ IEG +ICALG+AAA PV +++FR E E + EH
Sbjct: 364 RIVEGKGKPEDVTRLEEISHNIEGRSICALGEAAAMPVWSFVKNFRAEFEYYV-EHG 419
>gi|218514662|ref|ZP_03511502.1| NADH dehydrogenase I subunit F [Rhizobium etli 8C-3]
Length = 283
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/284 (71%), Positives = 236/284 (83%), Gaps = 1/284 (0%)
Query: 78 GAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
GAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP+GLKWSFMPK SDGRP YLV
Sbjct: 1 GAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFPTGLKWSFMPKESDGRPHYLV 60
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
VNADESEPGTCKDR+IMRHDPH L+EGC++A M A+AAYIY+RGEY+ ER+ L+ A
Sbjct: 61 VNADESEPGTCKDRDIMRHDPHTLIEGCVVASFAMGANAAYIYVRGEYIREREALQAAID 120
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
E Y GLLGKN G+D D+++H+GAGAYICGEETALLESLEGK+G+PRLKPPFPAN G
Sbjct: 121 ECYDYGLLGKNN-KLGWDMDIYVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANMG 179
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTKLF +SGHVNKPCTVEEEM I
Sbjct: 180 LYGCPTTVNNVESIAVAPTILRRGAGWFSSIGRPNNVGTKLFMLSGHVNKPCTVEEEMGI 239
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 361
+EL+DRH GG+RGGWDNLLAVIPGG+S P++P D MD
Sbjct: 240 TFRELVDRHAGGIRGGWDNLLAVIPGGASCPIVPAKDIIDCPMD 283
>gi|344200637|ref|YP_004784963.1| NADH-quinone oxidoreductase subunit F [Acidithiobacillus
ferrivorans SS3]
gi|343776081|gb|AEM48637.1| NADH-quinone oxidoreductase, F subunit [Acidithiobacillus
ferrivorans SS3]
Length = 427
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 267/378 (70%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D I++E+KKS LRGRGGAGFP+GLKWSFMPK G YL+ NADE EPGTCKDR+IMR+
Sbjct: 42 DQIISEIKKSALRGRGGAGFPTGLKWSFMPKGVTG-TKYLLCNADEGEPGTCKDRDIMRY 100
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG +I M ASA YI+IRGE+V +E A +EAYA G LG+N G+ + F
Sbjct: 101 EPHRLIEGMIIGAYAMGASAGYIFIRGEFVEPIHIVEAALEEAYAKGYLGQNILGTDFSF 160
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++++ GAGAYICGEETAL+E+LEGK+G+PR KPPFPA+ GLYG PTT+ NVET A P
Sbjct: 161 DLYVYRGAGAYICGEETALMEALEGKKGQPRFKPPFPASYGLYGRPTTINNVETFASVPD 220
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ +G DWF + G+ NN GTK+F V+GHV KP E M +P K+L++ GG+R G
Sbjct: 221 IISKGGDWFLNLGKPNNGGTKIFSVTGHVRKPGNYEVSMGLPFKDLLE-MAGGLRPG-RQ 278
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGG+S ++ +V MDYD++ S LG +VI+MD S +V + R+S F
Sbjct: 279 LKAVIPGGTSTAMVAGAAMMEVTMDYDSISKAGSALGAGSVIIMDDSVCIVKTVERISRF 338
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREG GWLW +M RL+ G + E++ +L +V +IEG TICAL D
Sbjct: 339 YMHESCGQCTPCREGMGWLWRVMHRLENGQGREEDLQLLLDVGSRIEGRTICALADGGVA 398
Query: 457 PVQGLIRHFRPELERRIK 474
PV IR FR E E I+
Sbjct: 399 PVVSSIRLFREEYEYHIQ 416
>gi|388455141|ref|ZP_10137436.1| NADH dehydrogenase I subunit F [Fluoribacter dumoffii Tex-KL]
Length = 425
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/376 (55%), Positives = 269/376 (71%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++E+K S LRGRGGAGFP+GLKWSFM + + + Y+V N+DE EPGTCKDREI+ +P
Sbjct: 45 IIDELKTSALRGRGGAGFPTGLKWSFMNRNTPVQ-KYVVCNSDEGEPGTCKDREILTLNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG M A+ Y YIRGE+ + E A +EAYAAGLLGKN GSG DFD+
Sbjct: 104 HQLIEGMAIAGYTMGATVGYNYIRGEFWLPYERTEAALKEAYAAGLLGKNILGSGIDFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H GAGAYICGEETALL SLEG++G+PR KPPFPAN GLYG PTT+ N ET A P I+
Sbjct: 164 FNHLGAGAYICGEETALLNSLEGRKGQPRFKPPFPANYGLYGKPTTINNTETFASVPVIM 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF G+ NN G K F VSGHVNKP E + P K L++ G ++G +
Sbjct: 224 EKGGEWFLKLGKPNNGGAKCFSVSGHVNKPGNFEIPLGTPFKTLLELAGGVIKG--RKIK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGG+S+P+LP + + MDYD+++ SGLG+ AVI+MD++T +VDA+ R+S FY
Sbjct: 282 AVIPGGTSMPVLPGEVMMGLDMDYDSIQKAGSGLGSGAVIIMDETTCMVDALYRISEFYM 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL ++ R+K G+ + +++ L V IEG TICALG+AAAWPV
Sbjct: 342 DESCGQCTPCREGTGWLVRLLHRIKEGHGEPGDVEKLVNVANNIEGRTICALGEAAAWPV 401
Query: 459 QGLIRHFRPELERRIK 474
Q ++HFR E E +K
Sbjct: 402 QSFVKHFRDEFEYFVK 417
>gi|269469173|gb|EEZ80715.1| NADH dehydrogenase I chain F [uncultured SUP05 cluster bacterium]
Length = 422
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/390 (55%), Positives = 275/390 (70%), Gaps = 7/390 (1%)
Query: 92 VLKGA---DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTC 148
+LKG D I++E+K SGLRGRGGAGFP+GLKWSFMP+ +D Y+V N+DE EPGTC
Sbjct: 32 ILKGELTPDQIIDELKTSGLRGRGGAGFPTGLKWSFMPRNAD-MQKYVVCNSDEGEPGTC 90
Query: 149 KDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKN 208
KDR+I+R +PH ++EG I G M A+ Y YIRGE++ E A +EAY AGLLG+N
Sbjct: 91 KDRDILRFNPHSVIEGMAIGGFVMNATKGYNYIRGEFMEPFYRFEGALKEAYKAGLLGEN 150
Query: 209 ACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNV 268
S FD++ H GAGAYICGEETALLESLEGK+G+PR KPPFPAN GLYG PTT+ N
Sbjct: 151 IDKSSISFDLYAHLGAGAYICGEETALLESLEGKKGQPRFKPPFPANIGLYGKPTTINNT 210
Query: 269 ETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCG 328
E+ A P IL +G WFA G +N+ G KLF V+GHVNKP E M K+L+ + G
Sbjct: 211 ESFASVPEILAQGGQWFADIGVENSGGCKLFSVTGHVNKPSNFEVPMGTSFKDLL-KMAG 269
Query: 329 GVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVD 388
G+R G L AVIPGGSS P+L + + MDYD ++ S LG +VIVMD +T +V+
Sbjct: 270 GIRKG-RKLKAVIPGGSSTPVLTADVAMGMTMDYDGIEKAGSMLGAGSVIVMDDTTCMVE 328
Query: 389 AIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTIC 448
+ RL++FY ESCGQCTPCREGTGWL+ +++R+ GN K ++ID+L V ++I G+TIC
Sbjct: 329 TLTRLAHFYYDESCGQCTPCREGTGWLYRVLKRIMDGNGKADDIDLLLGVQEKIIGNTIC 388
Query: 449 ALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
ALGDAAA PV+ +R+FR E E I EH +
Sbjct: 389 ALGDAAAMPVESFLRNFREEFEYYI-EHGK 417
>gi|195334585|ref|XP_002033958.1| GM20146 [Drosophila sechellia]
gi|194125928|gb|EDW47971.1| GM20146 [Drosophila sechellia]
Length = 481
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 277/432 (64%), Gaps = 3/432 (0%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
P KT FG L D DR+F NLYG HD L GA +RGDWHRT +L+ +G +WI+ ++ SGL
Sbjct: 49 PNCKTKFGPLDDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIMKQISISGL 108
Query: 109 RGRGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLI 167
RGRGGAGF +GLKW F+ + S+ P ++VN E EPGTCKDREI+RH+PHKL+EG L+
Sbjct: 109 RGRGGAGFYAGLKWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDREILRHEPHKLIEGILL 168
Query: 168 AGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAY 227
GV M A +YIR + NE NL A EAY GLLG + CG+G FDV + G Y
Sbjct: 169 VGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVMVQRG-DRY 227
Query: 228 ICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFAS 287
+CGEETA++ L GK G+PR +PPF G + P V N E++AV PTILRRG W+A
Sbjct: 228 LCGEETAMINCLMGKLGRPRRRPPFLTEKGYFEHPCLVINAESIAVVPTILRRGSKWWAG 287
Query: 288 FGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSV 347
GR N+GTKL+C+SG VN PCTVEEEMSIPLK+LI+RH GGV+GGW+NL AV PGG S
Sbjct: 288 LGRSYNTGTKLYCLSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGWNNLAAVFPGGLST 347
Query: 348 PLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTP 407
PLL VLMD+D+L SG G AVIVM K D + + R F++ +C QC+
Sbjct: 348 PLLDPSTSGKVLMDFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSY 407
Query: 408 CREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT-ICALGDAAAWPVQGLIRHFR 466
CR+G WL I R G EID + ++ ICAL + + L+R F
Sbjct: 408 CRDGAIWLPEIFARFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFS 467
Query: 467 PELERRIKEHAE 478
++E R+ ++A+
Sbjct: 468 RQIEERLLKYAK 479
>gi|344342325|ref|ZP_08773196.1| NADH-quinone oxidoreductase, F subunit [Marichromatium purpuratum
984]
gi|343805661|gb|EGV23556.1| NADH-quinone oxidoreductase, F subunit [Marichromatium purpuratum
984]
Length = 427
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/376 (55%), Positives = 271/376 (72%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVK+S LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDR+I+R++P
Sbjct: 48 LIEEVKRSNLRGRGGAGFPTGLKWSFMPRTAPGQ-KYIVCNSDEGEPGTCKDRDILRYNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+++EG IAG + A+A Y YIRGE+ E A EAY AGLLG++ GSG DFD+
Sbjct: 107 HQVIEGMAIAGYCIGATAGYNYIRGEFYEPIARFEEALGEAYEAGLLGRDLLGSGVDFDL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
++H GAGAYICGEETALLES+EGK+G+PR KPPFPA GLYGCPTT+ N E++A P IL
Sbjct: 167 YVHCGAGAYICGEETALLESIEGKKGQPRYKPPFPAQQGLYGCPTTINNTESLASVPVIL 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
RG WF GR NN G KLF VSGHVN+P E + P ++L++ CGGV G L
Sbjct: 227 ERGGQWFLEQGRPNNGGPKLFSVSGHVNRPNNFEVPLGTPFRDLLEM-CGGVLDG-RPLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVP++P I MDYD++ S LG+ AVIV+ + T +V + LS+FY
Sbjct: 285 AVIPGGSSVPVVPGEIMMQTDMDYDSIAKAGSMLGSGAVIVIAEGTCMVHVLHNLSHFYM 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCGQCTPCREGTGWL +++R+ G + E++++L+ V +I G TICALGDAAA PV
Sbjct: 345 HESCGQCTPCREGTGWLARVLKRILDGQGRAEDLELLESVAGRIGGRTICALGDAAAMPV 404
Query: 459 QGLIRHFRPELERRIK 474
Q ++H+R E I+
Sbjct: 405 QSFLKHYRHEFAYLIE 420
>gi|195583606|ref|XP_002081608.1| GD25625 [Drosophila simulans]
gi|194193617|gb|EDX07193.1| GD25625 [Drosophila simulans]
Length = 481
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 277/432 (64%), Gaps = 3/432 (0%)
Query: 49 PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGL 108
P KT FG L D DR+F NLYG HD L GA +RGDWHRT +L+ +G +WI+ ++ SGL
Sbjct: 49 PNCKTKFGPLDDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIMKQISISGL 108
Query: 109 RGRGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLI 167
RGRGGAGF +GLKW F+ + S+ P ++VN E EPGTCKDREI+RH+PHKL+EG L+
Sbjct: 109 RGRGGAGFYAGLKWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDREILRHEPHKLIEGILL 168
Query: 168 AGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAY 227
GV M A +YIR + NE NL A EAY GLLG + CG+G FDV + G Y
Sbjct: 169 VGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVMVQRG-DRY 227
Query: 228 ICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFAS 287
+CGEETA++ L GK G+PR +PPF G + P V N E++AV PTILRRG W+A
Sbjct: 228 LCGEETAMINCLMGKLGRPRRRPPFLTEKGYFEHPCLVINAESIAVVPTILRRGSKWWAG 287
Query: 288 FGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSV 347
GR N+GTKL+C+SG VN PCTVEEEMSIPLK+LI+RH GGV+GGW+NL AV PGG S
Sbjct: 288 LGRSYNTGTKLYCLSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGWNNLAAVFPGGLST 347
Query: 348 PLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTP 407
PLL VLMD+D+L SG G AVIVM K D + + R F++ +C QC+
Sbjct: 348 PLLDPSTSGKVLMDFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSY 407
Query: 408 CREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT-ICALGDAAAWPVQGLIRHFR 466
CR+G WL I R G EID + ++ ICAL + + L+R F
Sbjct: 408 CRDGAIWLPEIFARFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFS 467
Query: 467 PELERRIKEHAE 478
++E R+ ++A+
Sbjct: 468 RQIEERLLKYAK 479
>gi|289207898|ref|YP_003459964.1| NADH-quinone oxidoreductase subunit F [Thioalkalivibrio sp. K90mix]
gi|288943529|gb|ADC71228.1| NADH-quinone oxidoreductase, F subunit [Thioalkalivibrio sp.
K90mix]
Length = 426
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 270/377 (71%), Gaps = 4/377 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVK S LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DESEPGTCKDREI+ ++P
Sbjct: 43 VIEEVKTSNLRGRGGAGFPTGLKWSFMPRNTPGQ-KYIVCNSDESEPGTCKDREILMYNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H L+EG IAG + A+ Y Y+RGE+++E A +EAY AG LGK+ GSG DFD
Sbjct: 102 HALIEGMAIAGYAIGATVGYNYMRGEFMDEVNTRFTAALKEAYDAGYLGKDIFGSGVDFD 161
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
++ GAGAYICGEETALLESLEGK+G+PR KPPFPAN GLYG PTT+ N E++A P I
Sbjct: 162 LYPSLGAGAYICGEETALLESLEGKKGQPRFKPPFPANYGLYGKPTTINNTESLASIPAI 221
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+R G WFA G + G KLF VSGHVNKP E + P K+L++ GGV G L
Sbjct: 222 IRNGGQWFADLGVPKSGGEKLFSVSGHVNKPGNYEIPLGTPFKDLLE-MSGGVLNG-RKL 279
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSSVP++P + MD+D++ S LG+ AVIVMD++ D+V A+ R+S FY
Sbjct: 280 KAVIPGGSSVPVVPGDVMLKANMDFDSIAQAGSMLGSGAVIVMDETADMVKALQRISRFY 339
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGTGWL+ ++ R+ G + E+++ L +V +IEGHTICALGDAAA P
Sbjct: 340 FSESCGQCTPCREGTGWLYRMLTRIVEGQGRPEDLERLDDVASKIEGHTICALGDAAAMP 399
Query: 458 VQGLIRHFRPELERRIK 474
V+ I+HFR E E I+
Sbjct: 400 VRSFIKHFRHEFEYYIQ 416
>gi|121998539|ref|YP_001003326.1| NADH-quinone oxidoreductase subunit F [Halorhodospira halophila
SL1]
gi|121589944|gb|ABM62524.1| NADH dehydrogenase subunit F [Halorhodospira halophila SL1]
Length = 426
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/426 (51%), Positives = 294/426 (69%), Gaps = 10/426 (2%)
Query: 65 FTNLYGMHDPFLKGAMKRGDWHRTKDLVLK---GADWIVNEVKKSGLRGRGGAGFPSGLK 121
+T L G +P+ ++ +R + VL+ +V+EVK+S LRGRGGAGFP G+K
Sbjct: 7 YTTL-GYDEPWSLETYRKVGGYRALERVLRTPMSPQEVVDEVKQSALRGRGGAGFPPGIK 65
Query: 122 WSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYI 181
W FMP+ G+ YL+ N+DESEPGTCKD +I+R +PH ++EG +IAG M A+ Y Y+
Sbjct: 66 WGFMPRDRAGQ-KYLICNSDESEPGTCKDHDILRFNPHAVVEGMIIAGYAMGATVGYNYL 124
Query: 182 RGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240
RGE+ +E + +E+A EA AG LG++ GSG+DF++H HYGAGAYICGEE+AL+ESLE
Sbjct: 125 RGEFHHEPFERMEQAVAEARKAGYLGRDILGSGFDFELHNHYGAGAYICGEESALMESLE 184
Query: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFC 300
GK+G+PR KPPFPA G+YG PTT+ N ET+A P ++R G +WF + G+ NN G K+F
Sbjct: 185 GKKGQPRYKPPFPAQVGIYGKPTTINNTETLASVPAVIRNGAEWFLNLGKPNNGGEKIFS 244
Query: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360
VSGHV P E M P +EL++ GGVR G L AVIPGGSS P++P + M
Sbjct: 245 VSGHVACPGNYEIPMGTPFRELLEM-AGGVRAG-HRLKAVIPGGSSTPVVPGETMLETDM 302
Query: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420
DYD++ A S LG+ AV+V+D++TD+V +AR++ FY ESCGQCTPCREGTGWL+ ++
Sbjct: 303 DYDSIAAAGSMLGSGAVVVIDETTDMVRILARITRFYYAESCGQCTPCREGTGWLYRAVQ 362
Query: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
R+ G +++ ML+EV QI GHTICA G+AAA PVQ I+HFR E E I EH R
Sbjct: 363 RIYEGRGTYDDLRMLEEVPGQIAGHTICAFGEAAATPVQSFIQHFRHEFEHYI-EHG-RS 420
Query: 481 LLEATA 486
+EA A
Sbjct: 421 PVEAAA 426
>gi|389798938|ref|ZP_10201946.1| NADH-quinone oxidoreductase subunit F [Rhodanobacter sp. 116-2]
gi|388444293|gb|EIM00413.1| NADH-quinone oxidoreductase subunit F [Rhodanobacter sp. 116-2]
Length = 436
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/378 (56%), Positives = 271/378 (71%), Gaps = 5/378 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++E+KKS LRGRGGAGFP+GLKWSFMPK Y++ N+DESEPGT KDR+I+R++P
Sbjct: 50 LIDEIKKSSLRGRGGAGFPTGLKWSFMPK--GDMQKYILCNSDESEPGTAKDRDILRYNP 107
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H ++EG IA ++ AY Y+RGE+ +E ++ E A +EAYAAGLLGKN GSG D D
Sbjct: 108 HAVVEGLAIACYCTGSTVAYNYLRGEFHHEPFEHFEAALKEAYAAGLLGKNIGGSGIDVD 167
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H GAGAYICGEETAL+ESLEGK+G PR KPPFPAN GLYG PTT+ N ET A P I
Sbjct: 168 IHAALGAGAYICGEETALMESLEGKKGWPRFKPPFPANYGLYGKPTTINNTETYASVPAI 227
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
LR G DWF + G+ NN G K+F VSGHVN+P E + P EL++ GGVR G +
Sbjct: 228 LRHGADWFLNLGKPNNGGPKIFSVSGHVNRPGNYEIRLGTPFAELLEM-AGGVRNG-HRI 285
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSS+P+LP + + MDYDA++ SGLG+ AVIVMD++T +V A R+S FY
Sbjct: 286 KAVIPGGSSMPVLPGEVMMGLTMDYDAIQKAGSGLGSGAVIVMDETTCMVRACERISQFY 345
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGTGW+ ++ R+ G +++ L+ V QIEGHTICA G+AA+WP
Sbjct: 346 HMESCGQCTPCREGTGWMHRVLTRIVAGKGVPDDLHRLKAVAGQIEGHTICAFGEAASWP 405
Query: 458 VQGLIRHFRPELERRIKE 475
VQG +RH+ E E ++
Sbjct: 406 VQGFLRHYWNEFEYYVEH 423
>gi|352081355|ref|ZP_08952233.1| NADH-quinone oxidoreductase, F subunit [Rhodanobacter sp. 2APBS1]
gi|351683396|gb|EHA66480.1| NADH-quinone oxidoreductase, F subunit [Rhodanobacter sp. 2APBS1]
Length = 436
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 271/377 (71%), Gaps = 5/377 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++E+KKS LRGRGGAGFP+GLKWSFMPK Y++ N+DESEPGT KDR+I+R++P
Sbjct: 50 LIDEIKKSSLRGRGGAGFPTGLKWSFMPK--GDMQKYILCNSDESEPGTAKDRDILRYNP 107
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H ++EG IA ++ AY Y+RGE+ +E ++ E A +EAYAAGLLGKN GSG D D
Sbjct: 108 HAVVEGLAIACYCTGSTVAYNYLRGEFHHEPFEHFEAALKEAYAAGLLGKNIGGSGIDVD 167
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H GAGAYICGEETAL+ESLEGK+G PR KPPFPAN GLYG PTT+ N ET A P I
Sbjct: 168 IHAALGAGAYICGEETALMESLEGKKGWPRFKPPFPANYGLYGKPTTINNTETYASVPAI 227
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
LR G DWF + G+ NN G K+F VSGHVN+P E + P EL++ GGVR G +
Sbjct: 228 LRNGADWFLNLGKPNNGGPKIFSVSGHVNRPGNYEIRLGTPFAELLEM-AGGVRNG-HRI 285
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSS+P+LP + + MDYDA++ SGLG+ AVIVMD++T +V A R+S FY
Sbjct: 286 KAVIPGGSSMPVLPGEVMMGLTMDYDAIQKAGSGLGSGAVIVMDETTCMVRACERISQFY 345
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGTGW+ ++ R+ G +++ L+ V QIEGHTICA G+AA+WP
Sbjct: 346 HMESCGQCTPCREGTGWMHRVLTRIVAGKGVPDDLHRLKAVAGQIEGHTICAFGEAASWP 405
Query: 458 VQGLIRHFRPELERRIK 474
VQG +RH+ E E ++
Sbjct: 406 VQGFLRHYWNEFEYYVE 422
>gi|317051066|ref|YP_004112182.1| NADH-quinone oxidoreductase subunit F [Desulfurispirillum indicum
S5]
gi|316946150|gb|ADU65626.1| NADH-quinone oxidoreductase, F subunit [Desulfurispirillum indicum
S5]
Length = 428
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/415 (51%), Positives = 280/415 (67%), Gaps = 3/415 (0%)
Query: 61 EDRIFTNLYGMHDPF-LKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSG 119
E ++ + YG+ + F L A + G + + D IV EVK+SGLRGRGGAGFP+G
Sbjct: 8 EVKVLSAKYGIANSFTLDVARQHGGYAQIDKAFSMSPDQIVEEVKQSGLRGRGGAGFPAG 67
Query: 120 LKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYI 179
+KWSF+PK +D +P YL VN+DESEPGT KDR+I+ DPH L+EG +I +++ AYI
Sbjct: 68 MKWSFLPKETD-KPIYLAVNSDESEPGTFKDRQILEKDPHMLIEGIIITCYAIKSHDAYI 126
Query: 180 YIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESL 239
YIRGEYV + + L+RA EAYAAGLLG+NACG GY DV +H GAGAYICGEE ALLES+
Sbjct: 127 YIRGEYVRQAEGLQRAIDEAYAAGLLGENACGKGYRVDVTVHRGAGAYICGEEMALLESI 186
Query: 240 EGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLF 299
EGK+G+PR+KPPFPA GLYG PT + NV+T+A P I+ G + FG + + GT LF
Sbjct: 187 EGKKGQPRVKPPFPALVGLYGAPTIINNVQTIASVPYIIEHGAAGYRQFGTEKSPGTFLF 246
Query: 300 CVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVL 359
+SGHV KP E E+ + +KE ID+ GG+ G L AVIPGGSS P+L +
Sbjct: 247 GISGHVEKPGVYETELGVSMKEFIDKMAGGIWKG-RKLKAVIPGGSSCPVLNAEDVEKCT 305
Query: 360 MDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIM 419
+DY++L S LG+ +IV D T +V + L YFY+HESCGQCTPCREGTGW++ I+
Sbjct: 306 LDYESLVENGSMLGSGGMIVSDDQTCMVRNLKNLLYFYQHESCGQCTPCREGTGWIYKIV 365
Query: 420 ERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
++ G K+E++D+L E+ +EG T+C L AAA P + I FR E E IK
Sbjct: 366 SDIEDGKGKMEDLDLLLEICDNMEGKTVCVLSGAAAMPCRSHILKFRQEFEEHIK 420
>gi|347818886|ref|ZP_08872320.1| NADH-quinone oxidoreductase subunit F [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 452
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/429 (50%), Positives = 285/429 (66%), Gaps = 10/429 (2%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA------DWIVNEVKK 105
+T F G E +I+ L G + L G + RG + + ++ K + ++ VK+
Sbjct: 17 QTCFHGRHIEPQIYAGLNG-SNWGLAGYVARGGYQALRRILGKDGSAGLSPEQVITMVKE 75
Query: 106 SGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I++ +PH ++EG
Sbjct: 76 SGLRGRGGAGFPTGLKWSFMPRAFPGQ-KYLVCNSDEGEPGTCKDRDILQFNPHVVIEGM 134
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
IA M S Y YI GE + E A EA AAG LG + GSG+ F++H +G G
Sbjct: 135 AIAAYAMGISVGYNYIHGEIFQTYERFEAALGEARAAGYLGGDVLGSGFGFELHAAHGFG 194
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G +
Sbjct: 195 AYICGEETALLESLEGKKGQPRFKPPFPASCGLYGKPTTINNTETFAAVPWIIRHGAAAY 254
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
+ G+ NN GTK+F VSG V +P E + P L++ GGVR G L AVIPGGS
Sbjct: 255 LACGKPNNGGTKIFSVSGDVEQPGNYEVPLGTPFPRLLEL-AGGVRAG-RTLKAVIPGGS 312
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S P+LP + + MDYD++ S LG+ AVIVMD S +V+++ RLSYFY HESCGQC
Sbjct: 313 SAPVLPAAVIMECSMDYDSIAKAGSMLGSGAVIVMDDSRCMVESLLRLSYFYAHESCGQC 372
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREGTGW+W ++ER++ G + +++D+L V I+G TICALGDAAA PV+ ++RHF
Sbjct: 373 TPCREGTGWMWRVLERIRKGQGRADDLDLLNSVADDIQGRTICALGDAAAMPVRAMLRHF 432
Query: 466 RPELERRIK 474
RPE E I+
Sbjct: 433 RPEFEALIQ 441
>gi|118602280|ref|YP_903495.1| NADH-quinone oxidoreductase, F subunit [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567219|gb|ABL02024.1| NADH dehydrogenase subunit F [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 422
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/390 (54%), Positives = 276/390 (70%), Gaps = 7/390 (1%)
Query: 92 VLKGA---DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTC 148
+LKG ++I++E+K SGLRGRGGAGFP+GLKWSFMP+ SDG+ Y++ N+DE EPGTC
Sbjct: 32 ILKGELTPEYIIDELKTSGLRGRGGAGFPTGLKWSFMPRHSDGQ-KYVICNSDEGEPGTC 90
Query: 149 KDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKN 208
KDR+I+R +PH ++EG I G M AS Y YIRGE++ E A +EAY GLLG+N
Sbjct: 91 KDRDILRFNPHAVIEGMAIGGFVMNASVGYNYIRGEFMEPFYRFEDALKEAYKVGLLGRN 150
Query: 209 ACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNV 268
S +FD++ H GAGAYICGEETALLES+EGK+G+PR KPPFPAN GL+G PT + N
Sbjct: 151 INNSSVNFDLYTHLGAGAYICGEETALLESIEGKKGQPRFKPPFPANVGLFGKPTMINNT 210
Query: 269 ETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCG 328
E+ A P ILR G WFA G +N+ G KLF VSGHV P E M P K+L+ + G
Sbjct: 211 ESFASVPEILRCGGQWFADIGVENSGGCKLFSVSGHVKNPANFEVPMGTPFKDLL-KMAG 269
Query: 329 GVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVD 388
G+R G L AVIPGGSS P+L + ++ MDYD ++ S LG +VI+MD+ST +V+
Sbjct: 270 GMRDG-ARLKAVIPGGSSTPVLTAKVAMNMTMDYDGIEKAGSMLGAGSVIIMDESTCMVE 328
Query: 389 AIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTIC 448
+ RL++FY ESCGQCTPCREGTGWL+ +++R+ GN + +ID+L V +I G+TIC
Sbjct: 329 VLTRLTHFYYDESCGQCTPCREGTGWLYRVLKRIIDGNGEQTDIDLLLGVQDKIIGNTIC 388
Query: 449 ALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
ALGDAAA PV+ +R+FR E + I EH +
Sbjct: 389 ALGDAAAMPVESFLRNFRLEFKYYI-EHGK 417
>gi|345873389|ref|ZP_08825301.1| NADH-quinone oxidoreductase, F subunit [Thiorhodococcus drewsii
AZ1]
gi|343917277|gb|EGV28083.1| NADH-quinone oxidoreductase, F subunit [Thiorhodococcus drewsii
AZ1]
Length = 427
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 266/376 (70%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVK S LRGRGGAGFP+GLKWSFMP+ G+ Y+V N+DE EPGTCKDR+I+R++P
Sbjct: 48 LIEEVKLSNLRGRGGAGFPTGLKWSFMPRTGPGQ-KYIVCNSDEGEPGTCKDRDILRYNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG + A+ Y YIRGE+ E A +EAYAAGLLG N SG DFD
Sbjct: 107 HQLIEGMAIAGYCIGATVGYNYIRGEFYEPIARFEGALREAYAAGLLGTNLQDSGVDFDC 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALLES+EGK+G+PR KPPFPA GLYGCPTT+ N E++A P IL
Sbjct: 167 YSHMGAGAYICGEETALLESIEGKKGQPRFKPPFPAQYGLYGCPTTINNTESLASVPVIL 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WF GR NN G KLF VSGHVN P E M IP + L++ GGV+ G L
Sbjct: 227 EKGGQWFLELGRPNNGGLKLFSVSGHVNAPNNFEVPMGIPFRTLLEM-SGGVKDG-KALK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVP++P + DV MDYD++ S LG+ A+IV+ + T +V + LS+FY
Sbjct: 285 AVIPGGSSVPVVPGDLMMDVDMDYDSIAKAGSMLGSGAIIVIAEGTCMVKVLHNLSHFYM 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCGQCTPCREGTGWL ++ R+ G + E++++L+ V +I G TICALGDAAA PV
Sbjct: 345 HESCGQCTPCREGTGWLARVLHRMLDGKGRPEDLELLESVAGRIGGRTICALGDAAAMPV 404
Query: 459 QGLIRHFRPELERRIK 474
Q ++H+R E I+
Sbjct: 405 QSFLKHYRHEFAYLIE 420
>gi|52842982|ref|YP_096781.1| NADH dehydrogenase I subunit F [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778667|ref|YP_005187109.1| NADH dehydrogenase I subunit F [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52630093|gb|AAU28834.1| NADH dehydrogenase I, F subunit [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364509485|gb|AEW53009.1| NADH dehydrogenase I, F subunit [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 428
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 266/376 (70%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ E+K S LRGRGGAGFP+GLKWSFM + S + Y+V N+DE EPGTCKDREI+ +P
Sbjct: 48 IIEELKTSALRGRGGAGFPTGLKWSFMNRNSPVQ-KYVVCNSDEGEPGTCKDREILTLNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG M A+ Y YIRGE+ + E A +EAY AGLLGKN GSG+DFD+
Sbjct: 107 HQLIEGMAIAGYVMGATVGYNYIRGEFWLPFERTEAAIKEAYDAGLLGKNILGSGFDFDL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALL S+EGK+G PR KPPFPAN GLYG PTT+ N ET A P I+
Sbjct: 167 YNHLGAGAYICGEETALLNSIEGKKGMPRFKPPFPANYGLYGKPTTINNTETFASVPVIM 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF G+ NN G K F VSGHVNKP E + P K L+D G ++G +
Sbjct: 227 EKGGEWFLKLGKPNNGGAKCFSVSGHVNKPGNYEIPLGTPFKTLLDLAGGVIKG--RKIK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + + MDYD+++ SGLG+ AVI+MD++T +VDA+ R+S FY
Sbjct: 285 AVIPGGSSMPVLPGDVMLGLDMDYDSIQKAGSGLGSGAVIIMDETTCMVDALYRISEFYM 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL ++ R+ G+ + +++ L V IEG TICALG+AAAWPV
Sbjct: 345 DESCGQCTPCREGTGWLVRLLHRIINGHGEPGDVEKLVNVANNIEGRTICALGEAAAWPV 404
Query: 459 QGLIRHFRPELERRIK 474
Q ++HF E E IK
Sbjct: 405 QSFVKHFYDEFEYFIK 420
>gi|288942129|ref|YP_003444369.1| NADH-quinone oxidoreductase subunit F [Allochromatium vinosum DSM
180]
gi|288897501|gb|ADC63337.1| NADH-quinone oxidoreductase, F subunit [Allochromatium vinosum DSM
180]
Length = 427
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/381 (55%), Positives = 272/381 (71%), Gaps = 4/381 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVK+S LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDR+I+R++P
Sbjct: 48 LIEEVKRSALRGRGGAGFPTGLKWSFMPRQAPGQ-KYIVCNSDEGEPGTCKDRDILRYNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG + A+ Y YIRGE+ + E A +EAYAAGLLG++ GSG DFD+
Sbjct: 107 HQLIEGMAIAGYCIGATVGYNYIRGEFYEPIERFEDAVREAYAAGLLGRDIQGSGVDFDL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALLES+EGK+G+PR KPPFPA GLYG PTT+ N E++A P IL
Sbjct: 167 YAHMGAGAYICGEETALLESIEGKKGQPRYKPPFPAQVGLYGRPTTINNTESLASIPVIL 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WF GR NN G KLF VSGHVN P E + P + L++ GGV+ G L
Sbjct: 227 EKGGQWFLEQGRPNNGGPKLFSVSGHVNAPNNFEVPLGTPFRALLEM-AGGVKDG-RKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVP++P I DV MDYD++ S LG+ AVIV+ + T +V + LS+FY
Sbjct: 285 AVIPGGSSVPVVPGEIMMDVDMDYDSIAKAGSMLGSGAVIVIAEGTCMVKVLYNLSHFYM 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCGQCTPCREGTGWL +++R+ G + E++++L V +I G TICALGDAAA PV
Sbjct: 345 HESCGQCTPCREGTGWLARVIKRILDGQGRAEDLELLDSVAGRIGGKTICALGDAAAMPV 404
Query: 459 QGLIRHFRPELERRIKEHAER 479
Q ++H+R E I EH R
Sbjct: 405 QSFLKHYRHEFAYMI-EHGHR 424
>gi|198284341|ref|YP_002220662.1| NADH-quinone oxidoreductase subunit F [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218667549|ref|YP_002427003.1| NADH-quinone oxidoreductase subunit F [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248862|gb|ACH84455.1| NADH-quinone oxidoreductase, F subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218519762|gb|ACK80348.1| NADH-quinone oxidoreductase, F subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 427
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/378 (54%), Positives = 266/378 (70%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D I++E+KKS LRGRGGAGFP+GLKWSFMPK G YL+ NADE EPGTCKDR+IMR+
Sbjct: 42 DQIISEIKKSALRGRGGAGFPTGLKWSFMPKGVTG-TKYLLCNADEGEPGTCKDRDIMRY 100
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG +I M AS YI+IRGE+V +E A +EAYA G LG+N G+ + F
Sbjct: 101 EPHRLIEGMIIGAYAMGASTGYIFIRGEFVEPIHIVEGALEEAYAKGYLGQNILGTDFSF 160
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D+++H GAGAYICGEETAL+E+LEGK+G+PR KPPFPA+ GLYG PTT+ NVET A P+
Sbjct: 161 DLYVHRGAGAYICGEETALMEALEGKKGQPRFKPPFPASYGLYGQPTTINNVETFASVPS 220
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ +G +WF + G+ NN GTK+F V+GHV +P E M P KEL++ GG+R G
Sbjct: 221 IIAKGGEWFLNLGKPNNGGTKIFSVTGHVQRPGNYEVPMGTPFKELLEM-AGGLRPG-RQ 278
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGG+S P++ V MDYD++ S LG +VIV+D S +V + R++ F
Sbjct: 279 LKAVIPGGTSTPMVGGEAMMAVTMDYDSIAKSGSALGAGSVIVIDDSVCIVKVVERIARF 338
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREG GWLW +M RL+ G + E++ +L +V +IEG TICAL D
Sbjct: 339 YMHESCGQCTPCREGMGWLWRVMHRLENGQGREEDLQLLLDVGSRIEGRTICALADGGVA 398
Query: 457 PVQGLIRHFRPELERRIK 474
PV +R FR E E I+
Sbjct: 399 PVVSSVRLFREEYEYHIR 416
>gi|390952119|ref|YP_006415878.1| NADH-quinone oxidoreductase subunit F [Thiocystis violascens DSM
198]
gi|390428688|gb|AFL75753.1| NADH-quinone oxidoreductase, F subunit [Thiocystis violascens DSM
198]
Length = 427
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/378 (56%), Positives = 270/378 (71%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ +++EVKKS LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDR+I+R+
Sbjct: 46 NQLIDEVKKSNLRGRGGAGFPTGLKWSFMPRTAPGQ-KYIVCNSDEGEPGTCKDRDILRY 104
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+ Y YIRGE+ + E A QEAYAAGLLGK+ GSG DF
Sbjct: 105 NPHQLIEGMAIAGYCIGATVGYNYIRGEFYEPIERFEAAIQEAYAAGLLGKDIQGSGVDF 164
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ H GAGAYICGEETALLES+EGK+G+PR KPPFPA GLYG PTT+ N ET+A P
Sbjct: 165 DLYTHMGAGAYICGEETALLESIEGKKGQPRFKPPFPAQYGLYGQPTTINNTETLASVPV 224
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL +G WF GR NN G KLF VSGHVN P E + P ++L++ GGV G
Sbjct: 225 ILEKGGQWFLEQGRPNNGGPKLFSVSGHVNSPGNFEVPLGTPFRDLLEL-AGGVLDG-RT 282
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSSVP++P + V MDYD + S LG+ AVIV+ + T +V + L++F
Sbjct: 283 LKAVIPGGSSVPVVPGEMMMGVDMDYDCIAKAGSMLGSGAVIVIAEGTCMVKLLHNLAHF 342
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGWL ++ R+ G + E++D+L+ V +I G TICALGDAAA
Sbjct: 343 YMHESCGQCTPCREGTGWLARVLGRILDGKGRPEDLDLLESVAGRIGGRTICALGDAAAM 402
Query: 457 PVQGLIRHFRPELERRIK 474
PVQ ++H+R E I+
Sbjct: 403 PVQSFLKHYRHEFAYLIE 420
>gi|384086275|ref|ZP_09997450.1| NADH-quinone oxidoreductase subunit F [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 427
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/381 (54%), Positives = 268/381 (70%), Gaps = 3/381 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+KKS LRGRGGAGFP+GLKWSFMPK G YL+ NADE EPGTCKDR+IMR+
Sbjct: 42 EQIIAEMKKSALRGRGGAGFPTGLKWSFMPKGVSG-TKYLLCNADEGEPGTCKDRDIMRY 100
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG +I M A+A YI+IRGE++ +E A EAYAAG LG+N G+G+ F
Sbjct: 101 EPHRLIEGMIIGAYAMGATAGYIFIRGEFIEPIHIVEDALAEAYAAGYLGQNILGTGFSF 160
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++++ GAGAYICGEETAL+E+LEGK+G+PR KPPFPA+ GLYG PTT+ NVET A P
Sbjct: 161 DLYVYRGAGAYICGEETALMEALEGKKGQPRFKPPFPASYGLYGRPTTINNVETFASVPD 220
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ RG +WF + G+ NN GTK+F V+G V KP E M +P +EL++ GG+R G
Sbjct: 221 IITRGGEWFLNLGKPNNGGTKIFSVTGQVQKPGNYEVPMGLPFRELLE-MAGGLRPG-RR 278
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGG+S ++ + DV MDYD++ S LG +VIVMD S +V + R++ F
Sbjct: 279 LKAVIPGGTSTAMVAGEVMMDVTMDYDSISKAGSALGAGSVIVMDDSVCMVRTVERIARF 338
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREG GWLW +M RL+ G + E++ +L +V +IEG TICAL D
Sbjct: 339 YMHESCGQCTPCREGMGWLWRVMHRLENGQGREEDLQLLLDVGSRIEGRTICALADGGVA 398
Query: 457 PVQGLIRHFRPELERRIKEHA 477
PV I+ FR E E I+ +
Sbjct: 399 PVVSSIKLFREEYEYHIEHKS 419
>gi|254491610|ref|ZP_05104789.1| NADH oxidoreductase (quinone), F subunit [Methylophaga thiooxidans
DMS010]
gi|224463088|gb|EEF79358.1| NADH oxidoreductase (quinone), F subunit [Methylophaga thiooxydans
DMS010]
Length = 425
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/375 (55%), Positives = 267/375 (71%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ +VK S LRGRGGAGFP+GLKWSFMP+ G Y+V N+DE EPGTCKDR+I+R++P
Sbjct: 44 ILEQVKNSALRGRGGAGFPTGLKWSFMPRRMPGE-KYIVCNSDEGEPGTCKDRDILRYNP 102
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG +IAG + A Y YIRGE+ + E A +EA AGLLGKN GS + F++
Sbjct: 103 HQLIEGMIIAGYTIGAGTGYNYIRGEFYEPIERFEAALKEAREAGLLGKNILGSDFHFEL 162
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H H GAGAYICGEETALLESLEGK+G+PR KPPFPA GLYG PTT+ N ET+A P IL
Sbjct: 163 HTHIGAGAYICGEETALLESLEGKKGQPRYKPPFPAGYGLYGRPTTINNTETLASIPVIL 222
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+ G DWF G +NN G+K+FC++GHVNKP E + P EL++ GGVR G ++L
Sbjct: 223 QYGGDWFHEIGTQNNGGSKIFCMTGHVNKPGNYEVPLGTPFSELLEL-AGGVRDG-NSLK 280
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGG+S P++P + M YD + S LG +VI+MD+ T +V A+ R++YFY
Sbjct: 281 AVIPGGTSTPVVPGDKMLQLDMSYDGIGKGGSMLGAGSVIIMDEKTCMVKALKRIAYFYY 340
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ +++R++ G K E++D L V + I G+TICALGDAAA PV
Sbjct: 341 EESCGQCTPCREGTGWLYRVIKRIEEGQGKQEDLDRLVNVAENINGNTICALGDAAAAPV 400
Query: 459 QGLIRHFRPELERRI 473
I+HFR E + I
Sbjct: 401 MSFIKHFRDEFQYHI 415
>gi|374622766|ref|ZP_09695287.1| NADH-quinone oxidoreductase subunit F [Ectothiorhodospira sp.
PHS-1]
gi|373941888|gb|EHQ52433.1| NADH-quinone oxidoreductase subunit F [Ectothiorhodospira sp.
PHS-1]
Length = 426
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/379 (55%), Positives = 271/379 (71%), Gaps = 4/379 (1%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ EVK S LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DESEPGTCKDR+I+R
Sbjct: 41 DQVIEEVKASNLRGRGGAGFPAGLKWSFMPRTAPGQ-KYVVCNSDESEPGTCKDRDILRF 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYD 215
+PH L+EG +IAG + A+ Y Y+RGE+++E + +A +EAY G LG+N GSG D
Sbjct: 100 NPHALVEGMIIAGYSIGATVGYNYMRGEFMDEPYQRFSQAVKEAYDHGWLGRNIKGSGID 159
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FD++ GAGAYICGEETALLESLEGK+G PR KPPFPAN GLYG PTT+ N ET++ P
Sbjct: 160 FDLYPTLGAGAYICGEETALLESLEGKKGMPRFKPPFPANFGLYGRPTTINNTETLSSVP 219
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
I+R G +WFA+ G + + G KLF VSGHV +P E M P +L+ GGV G
Sbjct: 220 AIIREGGEWFAALGVERSGGEKLFSVSGHVERPGNYEVPMGTPFADLL-AMAGGVWKG-R 277
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
L AVIPGGSSVP++P + MDYD + V S LG+ AVIVMD++TD+V + R+S
Sbjct: 278 KLKAVIPGGSSVPVVPGDLMMTATMDYDGVTKVGSMLGSGAVIVMDETTDMVKVLQRISR 337
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FY ESCGQCTPCREGTGWL+ ++ R+ G ++E++ L EV +IEG TICALGDAAA
Sbjct: 338 FYFAESCGQCTPCREGTGWLYRMVTRIVEGQGRMEDLARLDEVAAKIEGRTICALGDAAA 397
Query: 456 WPVQGLIRHFRPELERRIK 474
PV+ ++HFR E E I+
Sbjct: 398 MPVRSFVKHFRHEFEHYIQ 416
>gi|406941970|gb|EKD74325.1| hypothetical protein ACD_45C00004G0015 [uncultured bacterium]
Length = 425
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/385 (55%), Positives = 269/385 (69%), Gaps = 4/385 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
IV+ +K S LRGRGGAGFP+GLKWSFM + G+ Y++ NADE EPGTCKDR+I+R +P
Sbjct: 43 IVDTLKLSALRGRGGAGFPTGLKWSFMRHDAPGQ-KYVLCNADEGEPGTCKDRDILRFNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG M A+ Y YIRGE+ + E A EA AG +GKN GSG D D+
Sbjct: 102 HQLIEGLAIAGYAMGATVVYNYIRGEFFEPYQRFEAALDEARRAGFVGKNILGSGMDVDI 161
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETAL+ESLEGK+G PR KPPFPA GLYG PTT+ NVET A P IL
Sbjct: 162 YSHLGAGAYICGEETALMESLEGKKGMPRFKPPFPAARGLYGKPTTINNVETFASVPVIL 221
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF + G+ NN G K+F V+GHVNKP E + P KEL+ GGVR G L
Sbjct: 222 EKGAEWFLNLGKPNNGGCKIFSVTGHVNKPGNYEVPLGTPFKELLAM-AGGVRQG-HQLK 279
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + MD+D+L+ SGLG+ AVIVMD++ +V A+ R+S+FY
Sbjct: 280 AVIPGGSSMPVLPAETMLKLDMDFDSLQKAGSGLGSGAVIVMDETVCMVKALQRISHFYM 339
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGW++ ++ R++ G+ L +I LQ K IEG TICA G+AAAWPV
Sbjct: 340 EESCGQCTPCREGTGWVYRLVHRIEHGHGTLGDIQTLQRAAKNIEGRTICAFGEAAAWPV 399
Query: 459 QGLIRHFRPELERRIKEHAERELLE 483
G ++HF E + EH + + L+
Sbjct: 400 GGFLKHFYDEFVYHV-EHKKCQTLK 423
>gi|124487823|gb|ABN11995.1| putative NADH dehydrogenase (ubiquinone) flavoprotein 1
[Maconellicoccus hirsutus]
Length = 266
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/261 (76%), Positives = 223/261 (85%)
Query: 220 IHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILR 279
+H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ GL+GCPTTV+NVETVAVSPTI R
Sbjct: 1 MHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGLFGCPTTVSNVETVAVSPTICR 60
Query: 280 RGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLA 339
RG DWF SFGR NSGTKLF +SGHVN PCTVEEEMSIPLKELI+RH GGV GGWDNLLA
Sbjct: 61 RGGDWFVSFGRPRNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERHAGGVIGGWDNLLA 120
Query: 340 VIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKH 399
VIPGGSS PL+PK +C+DV+MD+D L A Q+ LGTAAVIVM+K TDVV AIARL FYKH
Sbjct: 121 VIPGGSSTPLIPKKVCEDVMMDFDGLVAAQTSLGTAAVIVMNKQTDVVKAIARLIMFYKH 180
Query: 400 ESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQ 459
ESCGQCTPCREG W+ +M R GN + EIDML E++KQIEGHTICALGD AAWPVQ
Sbjct: 181 ESCGQCTPCREGINWMNKMMYRFVDGNGQTPEIDMLWELSKQIEGHTICALGDGAAWPVQ 240
Query: 460 GLIRHFRPELERRIKEHAERE 480
GLIRHFRPE+ERRI E + +
Sbjct: 241 GLIRHFRPEIERRISEFQKSQ 261
>gi|54295613|ref|YP_128028.1| NADH dehydrogenase I chain F [Legionella pneumophila str. Lens]
gi|54298767|ref|YP_125136.1| NADH dehydrogenase I chain F [Legionella pneumophila str. Paris]
gi|148361097|ref|YP_001252304.1| NADH dehydrogenase I subunit F [Legionella pneumophila str. Corby]
gi|296108427|ref|YP_003620128.1| NADH dehydrogenase I subunit F [Legionella pneumophila 2300/99
Alcoy]
gi|397668455|ref|YP_006509992.1| NADH:ubiquinone oxidoreductase subunit F [Legionella pneumophila
subsp. pneumophila]
gi|53752552|emb|CAH13984.1| NADH dehydrogenase I chain F [Legionella pneumophila str. Paris]
gi|53755445|emb|CAH16941.1| NADH dehydrogenase I chain F [Legionella pneumophila str. Lens]
gi|148282870|gb|ABQ56958.1| NADH dehydrogenase I, F subunit [Legionella pneumophila str. Corby]
gi|295650329|gb|ADG26176.1| NADH dehydrogenase I chain F [Legionella pneumophila 2300/99 Alcoy]
gi|307611653|emb|CBX01344.1| NADH dehydrogenase I chain F [Legionella pneumophila 130b]
gi|395131866|emb|CCD10159.1| NADH:ubiquinone oxidoreductase, chain F [Legionella pneumophila
subsp. pneumophila]
Length = 425
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 265/376 (70%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ E+K S LRGRGGAGFP+GLKWSFM + S + Y+V N+DE EPGTCKDREI+ +P
Sbjct: 45 IIEELKTSALRGRGGAGFPTGLKWSFMNRNSPVQ-KYVVCNSDEGEPGTCKDREILTLNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG M A+ Y YIRGE+ + E A +EAY AGLLGKN GSG DFD+
Sbjct: 104 HQLIEGMAIAGYVMGATVGYNYIRGEFWLPFERTEAAIKEAYDAGLLGKNILGSGVDFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALL S+EGK+G PR KPPFPAN GLYG PTT+ N ET A P I+
Sbjct: 164 YNHLGAGAYICGEETALLNSIEGKKGMPRFKPPFPANYGLYGKPTTINNTETFASVPVIM 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF G+ NN G K F VSGHVNKP E + P K L+D G ++G +
Sbjct: 224 EKGGEWFLKLGKPNNGGAKCFSVSGHVNKPGNYEIPLGTPFKTLLDLAGGVIKG--RKIK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + + MDYD+++ SGLG+ AVI+MD++T +VDA+ R+S FY
Sbjct: 282 AVIPGGSSMPVLPGDVMLGLDMDYDSIQKAGSGLGSGAVIIMDETTCMVDALYRISEFYM 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL ++ R+ G+ + +++ L V IEG TICALG+AAAWPV
Sbjct: 342 DESCGQCTPCREGTGWLVRLLHRIINGHGEPGDVEKLVNVANNIEGRTICALGEAAAWPV 401
Query: 459 QGLIRHFRPELERRIK 474
Q ++HF E E IK
Sbjct: 402 QSFVKHFYDEFEYFIK 417
>gi|335044176|ref|ZP_08537201.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit [Methylophaga
aminisulfidivorans MP]
gi|333787422|gb|EGL53306.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit [Methylophaga
aminisulfidivorans MP]
Length = 425
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/375 (54%), Positives = 265/375 (70%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ ++K S LRGRGGAGFP+GLKWSFMP+ G Y+V N+DE EPGTCKDR+I+R +P
Sbjct: 44 IIEQIKNSALRGRGGAGFPTGLKWSFMPRRLPGD-KYIVCNSDEGEPGTCKDRDILRFNP 102
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+++EG +IAG + A Y YIRGE+ + E A +EA AG LGK+ SG++F +
Sbjct: 103 HQVIEGMIIAGYTIGAQTGYNYIRGEFYEPIERFEAALEEARQAGYLGKDILDSGFNFQL 162
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H H GAGAYICGEETALLESLEGK+G+PR KPPFPA GLYG PTT+ N E++A P IL
Sbjct: 163 HTHIGAGAYICGEETALLESLEGKKGQPRYKPPFPAGYGLYGRPTTINNTESLASIPVIL 222
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+ G DWF G NN G+K+FC++GHVNKP E + P EL++ GGVR G L
Sbjct: 223 QHGADWFHDLGTPNNGGSKIFCMTGHVNKPGNYEVPLGTPFAELLEL-AGGVRYG-HQLK 280
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P++P I + M YD + +S LG +VIVMD ST +V A+ R++YFY
Sbjct: 281 AVIPGGSSTPVVPADIMMGLDMSYDGIAKARSMLGAGSVIVMDDSTCMVKALQRIAYFYY 340
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ +++R++ G + E++D L +V + I G+TICALGDAAA PV
Sbjct: 341 EESCGQCTPCREGTGWLYRVVKRIEEGQGRQEDLDRLVDVAENINGNTICALGDAAAAPV 400
Query: 459 QGLIRHFRPELERRI 473
I+HFR E + I
Sbjct: 401 VSFIKHFRDEFQYHI 415
>gi|350552110|ref|ZP_08921317.1| NADH-quinone oxidoreductase, F subunit [Thiorhodospira sibirica
ATCC 700588]
gi|349795176|gb|EGZ48979.1| NADH-quinone oxidoreductase, F subunit [Thiorhodospira sibirica
ATCC 700588]
Length = 416
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/378 (56%), Positives = 272/378 (71%), Gaps = 4/378 (1%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D I+ EVK++ LRGRGGAGFP+GLKWSFMP+ + G+ YLV N+DESEPGTCKDR+I+R
Sbjct: 41 DDIIEEVKRANLRGRGGAGFPTGLKWSFMPRKAPGQ-KYLVCNSDESEPGTCKDRDILRF 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYD 215
+PH L+EG +IAG M A+ Y Y+RGE+++E +A +EAYA G LGKN GSG D
Sbjct: 100 NPHALVEGMIIAGYAMGATVGYNYMRGEFLDEPYARFSQAVREAYAHGWLGKNIHGSGID 159
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
F+++ GAGAYICGEETALLESLEGK+G+PR KPPFPAN GLYG PTT+ N E++A P
Sbjct: 160 FELYPTLGAGAYICGEETALLESLEGKKGQPRYKPPFPANYGLYGRPTTINNTESLASIP 219
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
I+R+G WFA+ G + G K+F VSGHV +P E + P + L+D GGV G
Sbjct: 220 AIIRQGGAWFAALGDDKSGGEKIFSVSGHVERPGNYEVPIGTPFRALLDL-AGGVWKG-R 277
Query: 336 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY 395
L AVIPGGSSVP++P + + M YD L A S LG+ AVIVMD++TD+V + R+S
Sbjct: 278 KLKAVIPGGSSVPVVPGEVMLNATMSYDGLIAAGSMLGSGAVIVMDETTDMVRVLHRISR 337
Query: 396 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 455
FY ESCGQCTPCREGTGWL+ ++ RL G + E+++ L + IEGHTICALGDAAA
Sbjct: 338 FYFSESCGQCTPCREGTGWLYRMLGRLLDGQGRPEDLEHLDRIAANIEGHTICALGDAAA 397
Query: 456 WPVQGLIRHFRPELERRI 473
PV+ ++H+R E ER +
Sbjct: 398 MPVRSFLKHYRHEFERYL 415
>gi|387130154|ref|YP_006293044.1| NADH-ubiquinone oxidoreductase subunit F [Methylophaga sp. JAM7]
gi|386271443|gb|AFJ02357.1| NADH-ubiquinone oxidoreductase chain F [Methylophaga sp. JAM7]
Length = 434
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/375 (54%), Positives = 264/375 (70%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ ++K S LRGRGGAGFP+GLKWSFMP+ G Y+V N+DE EPGTCKDR+I+R++P
Sbjct: 45 IIEQLKNSALRGRGGAGFPTGLKWSFMPRRMPG-AKYIVCNSDEGEPGTCKDRDILRYNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG +IAG + A+ Y YIRGE+ +A EA AG LG++ GSG+ FD+
Sbjct: 104 HQLIEGMIIAGYTIGANTGYNYIRGEFFEPIDRFRQALIEAREAGYLGQDILGSGFHFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
++H GAGAYICGEETALLESLEGK+G+PR KPPFPA GLYG PTT+ N ET+A P IL
Sbjct: 164 YLHPGAGAYICGEETALLESLEGKKGQPRYKPPFPAGYGLYGRPTTINNTETLASVPVIL 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+ G DWF G NN G K+FCV+GHVNKP E + +P +L+ GGVR G L
Sbjct: 224 QHGADWFHELGTPNNGGQKIFCVTGHVNKPGNYEVPLGMPFADLLAL-AGGVRDG-HQLK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P++P + + M YD + S LG +VIVMD ST +V A+ R++YFY
Sbjct: 282 AVIPGGSSTPVVPATVMMETTMSYDGIGKAGSMLGAGSVIVMDDSTCMVKALERIAYFYY 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R++ G + E++D L +V I+G+TICALGDAAA PV
Sbjct: 342 EESCGQCTPCREGTGWLYRVIHRIENGQGRQEDLDRLVDVASNIDGNTICALGDAAAAPV 401
Query: 459 QGLIRHFRPELERRI 473
I+HFR E + I
Sbjct: 402 ISFIKHFRDEFQYHI 416
>gi|389774725|ref|ZP_10192844.1| NADH-quinone oxidoreductase subunit F [Rhodanobacter spathiphylli
B39]
gi|388438324|gb|EIL95079.1| NADH-quinone oxidoreductase subunit F [Rhodanobacter spathiphylli
B39]
Length = 441
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/420 (52%), Positives = 286/420 (68%), Gaps = 9/420 (2%)
Query: 59 KDEDRIFTNLYGMHDPFLKGAMKRGDWHRT-KDLVLKGAD--WIVNEVKKSGLRGRGGAG 115
+D ++T L+ P+ + ++ D ++ K ++ + D +V+E+KKS LRGRGGAG
Sbjct: 8 QDHQVVYTTLH-FDKPWSMESYEKVDGYKAWKKILAEKPDPASLVDEIKKSSLRGRGGAG 66
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
FP+GLKWSFMPK Y++ N+DESEPGT KDR+I+R++PH ++EG IA ++
Sbjct: 67 FPTGLKWSFMPK--GDMQKYILCNSDESEPGTAKDRDILRYNPHAVIEGLAIACYCTGST 124
Query: 176 AAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
AY Y+RGE+ +E +++E A +EAYAAGLLGKN GSG D D++ GAGAYICGEETA
Sbjct: 125 VAYNYLRGEFHHEPYEHIEEALKEAYAAGLLGKNVQGSGIDVDIYNALGAGAYICGEETA 184
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGK+G+PR KPPFPA GLYG PTT+ N ET A P ILR G DWF + G+ NN
Sbjct: 185 LMESLEGKKGQPRFKPPFPAGFGLYGKPTTINNTETYASVPAILRNGADWFLNIGKPNNG 244
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
G K+F VSGHVN P E + P EL+ GGVR G L AVIPGGSS+ +LP I
Sbjct: 245 GPKIFSVSGHVNNPGNFEIRLGTPFSELLAM-AGGVRNG-HKLKAVIPGGSSMKVLPAEI 302
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
D MDYD L+ SGLG+ AVIVMD++T +V R+S FYK ESCGQCTPCREGTGW
Sbjct: 303 MLDSTMDYDCLQKAGSGLGSGAVIVMDETTCMVRVCHRISRFYKAESCGQCTPCREGTGW 362
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+ ++ R+ G E++ L+ + QIEGHTICA G+AAAWPVQG + F E E ++
Sbjct: 363 MHRVLTRIVEGRGTEEDLHRLKAIAGQIEGHTICAFGEAAAWPVQGFLARFWNEFEYFVQ 422
>gi|350562009|ref|ZP_08930846.1| NADH-quinone oxidoreductase, F subunit [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780327|gb|EGZ34662.1| NADH-quinone oxidoreductase, F subunit [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 426
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/388 (54%), Positives = 274/388 (70%), Gaps = 5/388 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVKKS LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DESEPGTCKDR+I+R +P
Sbjct: 43 VIEEVKKSNLRGRGGAGFPTGLKWSFMPRNTPGQ-KYIVCNSDESEPGTCKDRDILRFNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H L+EG IAG + A+ Y Y+RGE+++E + A +EAY G LG++ GSG DFD
Sbjct: 102 HALIEGMAIAGYAIGATVGYNYMRGEFMDEVYRRFADALKEAYDQGFLGRDILGSGVDFD 161
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
++ GAGAYICGEETALLESLEGK+G+PR KPPFPAN GLYG PTT+ N E++A P+I
Sbjct: 162 LYGSLGAGAYICGEETALLESLEGKKGQPRFKPPFPANYGLYGHPTTINNTESLASIPSI 221
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+R G DWFA G + G KLF VSGHVN+P E + P EL++ GGV G L
Sbjct: 222 IRNGGDWFAELGVPKSGGEKLFSVSGHVNRPGNYEVPLGTPFSELLEL-AGGVLDG-RRL 279
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSSVP++P MDYD++ S LG+ AVIVMD++TD+V + R+S FY
Sbjct: 280 KAVIPGGSSVPVVPGDAMMQANMDYDSIAKAGSMLGSGAVIVMDETTDMVRVLQRISRFY 339
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGTGW++ ++ R+ G + E+++ L +V +IEG TICALGDAAA P
Sbjct: 340 FSESCGQCTPCREGTGWMYRMLTRIVEGRGRPEDLERLDDVASKIEGRTICALGDAAAMP 399
Query: 458 VQGLIRHFRPELERRIKEHAERELLEAT 485
V+ I+H+R E I EH + + +A
Sbjct: 400 VRSFIKHYRHEFAHYI-EHGKSLVAQAA 426
>gi|397665377|ref|YP_006506915.1| NADH:ubiquinone oxidoreductase subunit F [Legionella pneumophila
subsp. pneumophila]
gi|395128788|emb|CCD07008.1| NADH:ubiquinone oxidoreductase, chain F [Legionella pneumophila
subsp. pneumophila]
Length = 425
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 263/376 (69%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ E+K S LRGRGGAGFP+GLKWSFM + S + Y+V N+DE EPGTCKDREI+ +P
Sbjct: 45 IIEELKTSALRGRGGAGFPTGLKWSFMNRNSPVQ-KYVVCNSDEGEPGTCKDREILTLNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG M A+ Y YIRGE+ + E A +EAY AGLLGKN GSG DFD+
Sbjct: 104 HQLIEGMAIAGYVMGATVGYNYIRGEFWLPFERTEAAIKEAYDAGLLGKNILGSGVDFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H GAGAYICGEETALL S+EGK+G PR KPPFPAN GLYG PTT+ N ET A P I+
Sbjct: 164 FNHLGAGAYICGEETALLNSIEGKKGMPRFKPPFPANYGLYGKPTTINNTETFASVPVIM 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF G+ NN G K F VSGHVNKP E + P K L+D G ++G +
Sbjct: 224 EKGGEWFLKLGKPNNGGAKCFSVSGHVNKPGNYEIPLGTPFKTLLDLAGGVIKG--RKIK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + + MDYD+++ SGLG+ AVI+MD++T +VDA+ R+S FY
Sbjct: 282 AVIPGGSSMPVLPGDVMLGLDMDYDSIQKAGSGLGSGAVIIMDETTCMVDALYRISEFYM 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL ++ R+ G + +++ L V IEG TICALG+AAAWPV
Sbjct: 342 DESCGQCTPCREGTGWLVRLLHRIINGYGEPGDVEKLVNVANNIEGRTICALGEAAAWPV 401
Query: 459 QGLIRHFRPELERRIK 474
Q ++HF E E IK
Sbjct: 402 QSFVKHFYDEFEYFIK 417
>gi|74317165|ref|YP_314905.1| NADH-quinone oxidoreductase subunit F [Thiobacillus denitrificans
ATCC 25259]
gi|74056660|gb|AAZ97100.1| NADH-quinone oxidoreductase, chain F [Thiobacillus denitrificans
ATCC 25259]
Length = 426
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/378 (55%), Positives = 265/378 (70%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D I+ E+K S LRGRGGAGFP+GLKWSFMP+ G Y+V N+DE EPGT KDR+I+R+
Sbjct: 46 DDIIAEIKTSALRGRGGAGFPTGLKWSFMPRAFPGD-KYIVCNSDEGEPGTFKDRDILRY 104
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A Y YI GE + ERA +EA AG LG N G+ + F
Sbjct: 105 NPHQLIEGMAIAGYVLGARVGYNYIHGEIFEVYQIFERALEEARQAGYLGANLFGTDFCF 164
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D+H H+G GAYICGEETALLES+EGK+G+PR KPPFPA+ GLYG PTT+ N ET+A P
Sbjct: 165 DLHAHHGYGAYICGEETALLESIEGKKGQPRFKPPFPASFGLYGKPTTINNTETLASVPW 224
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I++ G F G+ NN G KLF VSGHVN+P E + P EL++ GGVR G +
Sbjct: 225 IVQHGGQAFLELGKPNNGGAKLFSVSGHVNRPGNYEVPLGTPFTELLEM-AGGVRDG-RS 282
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP HI + MD+D++ S LG+ AVIVMD++ +V A+ RLSYF
Sbjct: 283 LKAVIPGGSSAPVLPGHIMMETTMDFDSIAKAGSMLGSGAVIVMDETVCMVRALERLSYF 342
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGW++ ++ R++ G + E++D+L V QI GHTICALGDAAA
Sbjct: 343 YYEESCGQCTPCREGTGWMYRVIHRIENGQGRPEDMDLLNSVAGQIGGHTICALGDAAAM 402
Query: 457 PVQGLIRHFRPELERRIK 474
PVQ ++HF E E I+
Sbjct: 403 PVQSFLKHFGHEFEHHIE 420
>gi|300113270|ref|YP_003759845.1| NADH-quinone oxidoreductase subunit F [Nitrosococcus watsonii
C-113]
gi|299539207|gb|ADJ27524.1| NADH-quinone oxidoreductase, F subunit [Nitrosococcus watsonii
C-113]
Length = 427
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/375 (56%), Positives = 265/375 (70%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++E+K SGLRGRGGAGFP+GLKWSFMPK G Y+V N+DE EPGT KDR+I+R++P
Sbjct: 45 IIDEIKTSGLRGRGGAGFPTGLKWSFMPKDLAGI-KYIVCNSDEGEPGTFKDRDILRYNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG + A+ Y Y RGE+ + E A +EAY AGLLGKN SG DFD+
Sbjct: 104 HQLIEGMAIAGYTIGATVGYNYTRGEFSEPIERFEDALEEAYQAGLLGKNILASGVDFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALLESLEGK+G PR KPPFPA GLYG PTT+ N ET+A P IL
Sbjct: 164 YSHPGAGAYICGEETALLESLEGKKGMPRYKPPFPAGFGLYGRPTTINNTETLASVPVIL 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WF G + GTK+F VSGHVN+P E M I K+L++ GG+R G + L
Sbjct: 224 EKGGPWFLKLGTPTSGGTKIFSVSGHVNRPGNYEVPMGISFKDLLEL-AGGMRNG-NALK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGG+SVP++P MDYD+L S LG +VI+MD++T +V A+ R+S FY+
Sbjct: 282 AVIPGGTSVPVMPAETIMAANMDYDSLAKAGSLLGAGSVIIMDETTCMVRALERISAFYR 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R++ G E++D + V + I+GHTICALGDAAA PV
Sbjct: 342 EESCGQCTPCREGTGWLYRVVHRIEQGQGTQEDLDKVVNVAQNIDGHTICALGDAAAAPV 401
Query: 459 QGLIRHFRPELERRI 473
I+HFR E + I
Sbjct: 402 ISFIKHFRDEFQYHI 416
>gi|406947130|gb|EKD78121.1| hypothetical protein ACD_42C00037G0001 [uncultured bacterium]
Length = 422
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/380 (54%), Positives = 265/380 (69%), Gaps = 7/380 (1%)
Query: 96 ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMR 155
A I+ +K SGLRGRGGAGFP+GLKWSF+ G+ Y++ N+DESEPGT KDR+I+R
Sbjct: 41 ASQIIEIIKSSGLRGRGGAGFPTGLKWSFVSPTVPGQ-KYVLCNSDESEPGTFKDRDILR 99
Query: 156 HDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYD 215
+PH+LLEG IA M ++ AY ++RGE+ E+A +E Y AGL+G N GSG D
Sbjct: 100 FNPHQLLEGLAIACYVMGSTVAYNFLRGEFYEPFLRCEQALKEMYEAGLVGNNVLGSGID 159
Query: 216 FDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSP 275
FD+ HY AGAYICGEETAL+ SLEGK+G PR KPPFPAN GLYG PT + N E+ A P
Sbjct: 160 FDIFNHYSAGAYICGEETALMNSLEGKRGMPRFKPPFPANFGLYGKPTNINNTESYASIP 219
Query: 276 TILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWD 335
IL +G +WFA G + + GTK+F VSGHVNKP E M IP EL+ G + D
Sbjct: 220 VILEKGAEWFAKMGPEKSGGTKIFSVSGHVNKPGNYEVPMGIPFSELLQLAGGML----D 275
Query: 336 N--LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARL 393
N L AVIPGGSS+P+LP I MDYD+L S LG+ AVIVM+++T +V A+ R+
Sbjct: 276 NIPLKAVIPGGSSMPVLPADIMMQTNMDYDSLAKAGSALGSGAVIVMNQNTCMVKALKRI 335
Query: 394 SYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDA 453
S FY HESCGQCTPCREGTGW++ ++E+++ GN L++ID L+ V K IEG TICA G+A
Sbjct: 336 SQFYMHESCGQCTPCREGTGWVYRLVEKIENGNGTLKDIDALKRVAKNIEGRTICAFGEA 395
Query: 454 AAWPVQGLIRHFRPELERRI 473
AAWPV G ++HF E + +
Sbjct: 396 AAWPVGGFLKHFYDEFKYHV 415
>gi|82702225|ref|YP_411791.1| NADH-quinone oxidoreductase subunit F [Nitrosospira multiformis
ATCC 25196]
gi|82410290|gb|ABB74399.1| NADH dehydrogenase subunit F [Nitrosospira multiformis ATCC 25196]
Length = 425
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 262/376 (69%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ EVKKS LRGRGGAGFP+GLKWSFMPK +G YLV N+DE EPGT KDR+IMR++P
Sbjct: 47 IIEEVKKSALRGRGGAGFPTGLKWSFMPKQYEGD-KYLVCNSDEGEPGTFKDRDIMRYNP 105
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG LI M A Y Y+ GE + + +E A EA AAG LG N GS + F +
Sbjct: 106 HMLIEGMLIGAYAMGIRAGYNYVHGEIWDVYERMEEAVDEARAAGYLGDNILGSDFSFQL 165
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+
Sbjct: 166 YNHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASVPWII 225
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G D F G+ NN GTK+F VSGHVNKP E + P L++ GG+RGG L
Sbjct: 226 RHGGDKFLQLGKPNNGGTKIFSVSGHVNKPGNYEVPLGTPFAALLEM-AGGMRGG-RKLK 283
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
IPGGSS+P+LP + MDYD++ S LG+ AVI+MD +T +V A+ RLSYFY
Sbjct: 284 GCIPGGSSMPVLPGDVMMQTDMDYDSIAKAGSFLGSGAVIIMDDTTCMVRALERLSYFYY 343
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R++ G ++E++D+L + I+G TICALGDAAA PV
Sbjct: 344 EESCGQCTPCREGTGWLYRIVHRIETGKGRMEDLDLLNNLADNIQGRTICALGDAAAMPV 403
Query: 459 QGLIRHFRPELERRIK 474
+ +I+HFR E ++
Sbjct: 404 RAMIQHFRDEFAYHVE 419
>gi|302879336|ref|YP_003847900.1| NADH-quinone oxidoreductase subunit F [Gallionella
capsiferriformans ES-2]
gi|302582125|gb|ADL56136.1| NADH-quinone oxidoreductase, F subunit [Gallionella
capsiferriformans ES-2]
Length = 421
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/401 (52%), Positives = 271/401 (67%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +K G + + ++ + D I+ EVK S LRGRGGAGFP+GLKWSFMP+ G
Sbjct: 18 LENYLKVGGYQALRKILTEQTSPDAIIAEVKLSALRGRGGAGFPTGLKWSFMPRSFAGD- 76
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
Y+V N+DE EPGTCKD +IM ++PH L+EG IA M Y YI GE + +E
Sbjct: 77 KYIVCNSDEGEPGTCKDWDIMLYNPHLLIEGMAIAAYTMNVKTGYNYIHGEIFEAYERME 136
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A + A AAG LG N G G+ FD+H H G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 137 EACELARAAGFLGDNIMGLGFSFDLHNHLGYGAYICGEETALLESIEGKKGQPRFKPPFP 196
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+ G F G+ NN GTKLF VSGHVN P E
Sbjct: 197 ASFGLYGKPTTINNTETFASIPYIINNGGKAFLELGKPNNGGTKLFSVSGHVNNPGNFEV 256
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P +L++ GGVR G L AVIPGGSS+P+L + D+ MDYD+++ SGLG
Sbjct: 257 PMGTPFAKLLEM-AGGVRNG-HKLKAVIPGGSSMPVLTGEVMMDLTMDYDSIQKAGSGLG 314
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R++ G + E++D
Sbjct: 315 SGAVIVMDETVCMVRALERLSYFYHEESCGQCTPCREGTGWLYRIVHRIEHGQGRPEDLD 374
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L + + I G TICALG+AA WPVQG++++FR E E I+
Sbjct: 375 LLLSIGENIAGRTICALGEAAVWPVQGMLKNFRAEFEYHIE 415
>gi|319787438|ref|YP_004146913.1| NADH-quinone oxidoreductase subunit F [Pseudoxanthomonas suwonensis
11-1]
gi|317465950|gb|ADV27682.1| NADH-quinone oxidoreductase, F subunit [Pseudoxanthomonas
suwonensis 11-1]
Length = 456
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/419 (51%), Positives = 286/419 (68%), Gaps = 9/419 (2%)
Query: 59 KDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKG---ADWIVNEVKKSGLRGRGGAG 115
K+ ++T L+ + +K G + + ++ + AD +V VK+SGLRGRGGAG
Sbjct: 19 KEHQAVYTTLHFDKPWSYENYLKTGGYQALRRILTEKIPPAD-VVEMVKQSGLRGRGGAG 77
Query: 116 FPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRAS 175
FP+GLKWSFMPK Y++ N+DESEPGT KDR+I+R++PH ++EG IA ++
Sbjct: 78 FPTGLKWSFMPK--GDMQKYILCNSDESEPGTAKDRDILRYNPHAVIEGMAIACYATGST 135
Query: 176 AAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
Y Y+RGE+ +E ++LE A +AY G LGK+ GSG D D++ GAGAYICGEETA
Sbjct: 136 VGYNYLRGEFHHEPFEHLEEALADAYKHGWLGKDILGSGVDIDIYNALGAGAYICGEETA 195
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
L+ESLEGK+G+PR KPPFPAN GLYG PTT+ N ET A P I+R G +WF + G+ NN
Sbjct: 196 LMESLEGKKGQPRFKPPFPANFGLYGKPTTINNTETYASVPAIVRNGAEWFMNLGKPNNG 255
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
G K+F VSGHV +P E + P EL+D CGG+R G + + AVIPGGSS+P+LP +
Sbjct: 256 GCKIFSVSGHVARPGNHEIRLGTPFSELLDL-CGGIRNG-NRIKAVIPGGSSMPVLPGEV 313
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
+ MDYD+++ SGLG+ AVIVMD +T +V A R++ FY ESCGQCTPCREGTGW
Sbjct: 314 MMGLTMDYDSIQKAGSGLGSGAVIVMDHTTCMVRACQRIARFYYKESCGQCTPCREGTGW 373
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
++ ++ R+ A L+++ ML+ QIEGHTICA G+AAAWPVQG +RHF E E I
Sbjct: 374 MYRMLTRIANLEATLDDLHMLRTAAGQIEGHTICAFGEAAAWPVQGFLRHFWHEFEYAI 432
>gi|385810695|ref|YP_005847091.1| NADH dehydrogenase I subunit F [Ignavibacterium album JCM 16511]
gi|383802743|gb|AFH49823.1| NADH dehydrogenase I subunit F [Ignavibacterium album JCM 16511]
Length = 440
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/399 (51%), Positives = 276/399 (69%), Gaps = 5/399 (1%)
Query: 80 MKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 139
++ G + K + D I+++VK+SGLRGRGGA F +GLKWSFMPK +D +P YL VN
Sbjct: 19 LQHGGYTAAKKAFTQSPDDIIDQVKRSGLRGRGGAAFLTGLKWSFMPKTTD-KPKYLCVN 77
Query: 140 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEA 199
DESEPG+ KDR+I ++PH+L+EG +I + A AYIYIRGEY K +++A +A
Sbjct: 78 GDESEPGSFKDRQIFEYNPHQLIEGTIITCYAIGAKVAYIYIRGEYHKWIKLMQKALDDA 137
Query: 200 YAAGLLG---KNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANA 256
YA G LG K G+ + D++IH GAGAYICGEE+AL+ S+EGK+G PR+KPPFPA
Sbjct: 138 YANGYLGEKMKEKFGTDFSCDIYIHKGAGAYICGEESALMNSIEGKRGYPRVKPPFPAQN 197
Query: 257 GLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMS 316
GL+GCPTT+ NVET+ P I+ +G +WFAS G + GT LF VSGHVNKP E
Sbjct: 198 GLWGCPTTINNVETITNVPPIINKGWEWFASIGEPKHPGTILFGVSGHVNKPGVYELPSG 257
Query: 317 IPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAA 376
L ++I H GGV G +L VIPGGSS+P L + V MD ++LKA S +GT
Sbjct: 258 TLLTDIIYNHAGGVPGN-KKILCVIPGGSSMPPLRGDQIEGVKMDAESLKAAGSAIGTGG 316
Query: 377 VIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQ 436
++VMD+ TD+V +AR+++FY HESCGQCTPCREGTGWL I++RL G + ++D+L
Sbjct: 317 IMVMDEDTDLVKVLARIAHFYHHESCGQCTPCREGTGWLEKILKRLIAGKGSVSDLDLLI 376
Query: 437 EVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
V QIEG+TICALG+AAAWPV+ ++ FR E+R+ +
Sbjct: 377 TVANQIEGNTICALGEAAAWPVKFMVERFRDYFEKRVSK 415
>gi|339484292|ref|YP_004696078.1| NADH-quinone oxidoreductase subunit F [Nitrosomonas sp. Is79A3]
gi|338806437|gb|AEJ02679.1| NADH-quinone oxidoreductase, F subunit [Nitrosomonas sp. Is79A3]
Length = 425
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 262/376 (69%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVKKS LRGRGGAGFP+GLKWSFMPK +G Y+V N+DE EPGT KDR+IMR +P
Sbjct: 47 VIEEVKKSALRGRGGAGFPTGLKWSFMPKGYEGS-KYIVCNSDEGEPGTFKDRDIMRFNP 105
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IA M A Y YI GE + +E A +EA AG LG N GS + F +
Sbjct: 106 HLLIEGMIIAAYAMGVKAGYNYIHGEIWETYERMEEAVEEARVAGYLGNNILGSTFSFQL 165
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H+G GAYICGEETALLES+EGK+G+PR KPPFPAN GLYG PTT+ N ET + P I+
Sbjct: 166 YNHHGYGAYICGEETALLESIEGKKGQPRFKPPFPANYGLYGKPTTINNTETFSSVPWII 225
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G + + G+ NN GTKLF VSGHVNKP E + P EL++ GG+RGG L
Sbjct: 226 RNGGEKYLQLGKPNNGGTKLFSVSGHVNKPGNYEIPLGTPFAELLEL-AGGMRGG-RKLK 283
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
IPGGSS+P+LP I MDYD++ S LG+ AVI+MD +T +V A+ RLSYFY
Sbjct: 284 GCIPGGSSMPVLPGDIMMQTDMDYDSIAKAGSMLGSGAVIIMDDTTCMVRALERLSYFYY 343
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R++ G +LE++D+L + I+G TICALGDAAA PV
Sbjct: 344 EESCGQCTPCREGTGWLYRIVNRIEHGKGRLEDLDLLDNIADNIQGRTICALGDAAAMPV 403
Query: 459 QGLIRHFRPELERRIK 474
+ +I+HFR E I+
Sbjct: 404 RAMIQHFRNEFVYHIE 419
>gi|299066338|emb|CBJ37522.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum
CMR15]
Length = 431
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/405 (52%), Positives = 281/405 (69%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + I+ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKISPEQIIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I G M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A +EA AAGLLG N GSG++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 QALEEARAAGLLGDNILGSGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GPD + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLSIGPDNYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG L AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFSKLLEL-AGGMRGG-KKLKAVIPGGSSAPVVPADLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRVVDRIEHGKGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV-EHKQ 424
>gi|91789111|ref|YP_550063.1| NADH-quinone oxidoreductase subunit F [Polaromonas sp. JS666]
gi|91698336|gb|ABE45165.1| NADH dehydrogenase subunit F [Polaromonas sp. JS666]
Length = 467
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/430 (51%), Positives = 278/430 (64%), Gaps = 10/430 (2%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA------DWIVNEVKK 105
+T F G +I +L G + LK RG + + ++ K D ++ EVK
Sbjct: 25 QTCFHGRHIAPQILADLDG-SNWRLKDYEARGGYQALRKILGKDGGEGLTPDQVIAEVKA 83
Query: 106 SGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
S LRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+IM+++PH ++EG
Sbjct: 84 SSLRGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTCKDRDIMQYNPHSVIEGM 142
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
IA M S Y YI GE + E A EA AAGL+G+ GS + F +H +G G
Sbjct: 143 AIAAYAMGISIGYNYIHGEIFATYRRFEEALDEARAAGLIGEKILGSSFTFQLHASHGFG 202
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G +
Sbjct: 203 AYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAY 262
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
G+ NN GTK++ VSG V P E M P L++ GGVR G L AVIPGGS
Sbjct: 263 LECGKPNNGGTKIYSVSGDVELPGNYEVPMGTPFARLLEL-AGGVRKG-RTLKAVIPGGS 320
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S P+LP I D MDYD++ S LG+ AVIVMD S +V+++ RLSYFY HESCGQC
Sbjct: 321 SAPVLPASIMMDCTMDYDSIAKAGSMLGSGAVIVMDDSRCMVESLKRLSYFYMHESCGQC 380
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREGTGWLW +++R+ G+ K ++D+L V I+G TICALGDAAA PV+ +I+HF
Sbjct: 381 TPCREGTGWLWRVVDRIHNGHGKQTDMDLLNSVADNIQGRTICALGDAAAMPVRAMIKHF 440
Query: 466 RPELERRIKE 475
R E E I +
Sbjct: 441 RHEFEAMIPQ 450
>gi|17546776|ref|NP_520178.1| NADH dehydrogenase I subunit F [Ralstonia solanacearum GMI1000]
gi|17429076|emb|CAD15764.1| probable nadh dehydrogenaseI(chain f) oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 431
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/405 (52%), Positives = 281/405 (69%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + I+ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKISPEQIIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I G M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYAMGITVGYNYIHGEIWNEYKLFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A +EA AAGLLG N GSG++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 QALEEARAAGLLGDNILGSGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GPD + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLSIGPDNYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG L AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFSKLLEL-AGGMRGG-KKLKAVIPGGSSAPVVPADLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRVVDRIEHGKGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV-EHKQ 424
>gi|71906593|ref|YP_284180.1| NADH-quinone oxidoreductase, F subunit [Dechloromonas aromatica
RCB]
gi|71846214|gb|AAZ45710.1| NADH dehydrogenase subunit F [Dechloromonas aromatica RCB]
Length = 442
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/404 (53%), Positives = 278/404 (68%), Gaps = 8/404 (1%)
Query: 76 LKGAMKRGDWHRTKDLV---LKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
LK + RG + + K ++ + D +++EVKKS LRGRGGAGFP+GLKWSFMP+ G
Sbjct: 23 LKDYVARGGYAQLKRILDSKMTQED-VISEVKKSVLRGRGGAGFPTGLKWSFMPRSFPGD 81
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
Y+V N DE EPGT KDR+IMR++PH ++EG IA M A+ Y Y+ GE E K
Sbjct: 82 -KYVVCNTDEGEPGTFKDRDIMRYNPHAVIEGMAIAAYAMGANRGYNYVHGEVWLEYKRF 140
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
E A +A AAG +G+N GSG++F++ H+G GAYICGEETALLES+EGK+G+PR KPPF
Sbjct: 141 EEALDQARAAGFIGQNILGSGFNFELFAHHGYGAYICGEETALLESIEGKKGQPRFKPPF 200
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GLYG PTT+ N ET A P IL+ G + F + G+ NN GTKLF VSGHVN+P E
Sbjct: 201 PASFGLYGKPTTINNTETFASIPFILKMGGEEFLNLGKPNNGGTKLFSVSGHVNRPGNYE 260
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
+ P L++ CGG+RGG L AVIPGGSS P++P + D MDYD++ S L
Sbjct: 261 IPLGTPFATLLEM-CGGMRGG-RKLKAVIPGGSSAPVMPADVIMDCTMDYDSISKGGSML 318
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
G+ AVIVMD++ +V A+ RLS+FY ESCGQCTPCREGT W++ ++ R++ G K E++
Sbjct: 319 GSGAVIVMDETVCMVKALDRLSFFYHEESCGQCTPCREGTAWMYKVVHRIENGLGKPEDL 378
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
D+L V I G TICALGDAAA+PVQ I+HF E E I EH
Sbjct: 379 DLLNSVLGNIAGRTICALGDAAAFPVQSFIKHFGKEFEYHI-EH 421
>gi|257095314|ref|YP_003168955.1| NADH-quinone oxidoreductase subunit F [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047838|gb|ACV37026.1| NADH-quinone oxidoreductase, F subunit [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 442
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 263/378 (69%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
++++NEVKKS LRGRGGAGFP+GLKWSFMP+ G Y+V N+DE EPGT KDR+I+R+
Sbjct: 46 EYVINEVKKSVLRGRGGAGFPTGLKWSFMPRSFPGD-KYVVCNSDEGEPGTFKDRDILRY 104
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
DPH ++EG IAG M A Y YI GE + E A EA AAGLLGK+ GSG++F
Sbjct: 105 DPHSVIEGMAIAGFAMGAGRGYNYIHGEVWEIYERFEEALDEARAAGLLGKDILGSGFNF 164
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D+ H+G GAYICGEETALLES+EGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 165 DLFAHHGYGAYICGEETALLESIEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASIPY 224
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ G + + G+ NN GTKLF VSGHVN+P E + P L+D GG+RGG
Sbjct: 225 IINLGGEHYLEAGKANNGGTKLFSVSGHVNRPGNYEIPLGTPFATLLDM-AGGMRGG-RQ 282
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L IPGGSS P++P D MDYD++ S LG+ AVIVMD++T +V A+ RLS+F
Sbjct: 283 LKGCIPGGSSSPVVPAATMMDCTMDYDSISKAGSMLGSGAVIVMDETTCMVKALERLSFF 342
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGT WL+ I+ R++ G + +++D+L VT I G TICALGDAA+
Sbjct: 343 YYEESCGQCTPCREGTNWLYKIVHRIEHGQGRADDLDLLASVTTNIMGRTICALGDAASM 402
Query: 457 PVQGLIRHFRPELERRIK 474
PVQ I+H+R E I+
Sbjct: 403 PVQSFIKHYRDEFAYHIE 420
>gi|241663479|ref|YP_002981839.1| NADH-quinone oxidoreductase subunit F [Ralstonia pickettii 12D]
gi|309781857|ref|ZP_07676590.1| NADH oxidoreductase (quinone), F subunit [Ralstonia sp. 5_7_47FAA]
gi|404396482|ref|ZP_10988276.1| NADH oxidoreductase (quinone), F subunit [Ralstonia sp. 5_2_56FAA]
gi|240865506|gb|ACS63167.1| NADH-quinone oxidoreductase, F subunit [Ralstonia pickettii 12D]
gi|308919498|gb|EFP65162.1| NADH oxidoreductase (quinone), F subunit [Ralstonia sp. 5_7_47FAA]
gi|348613572|gb|EGY63151.1| NADH oxidoreductase (quinone), F subunit [Ralstonia sp. 5_2_56FAA]
Length = 431
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/405 (51%), Positives = 280/405 (69%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKITPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I G M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A +EA AAG LG N GSG++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 QALEEARAAGFLGDNILGSGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GPD + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAIGPDNYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG L AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFSKLLEL-AGGMRGG-KKLKAVIPGGSSAPVVPADLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTGWLYRVVDRIEHGKGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV-EHKQ 424
>gi|83746302|ref|ZP_00943355.1| NADH-quinone oxidoreductase chain F [Ralstonia solanacearum UW551]
gi|207742740|ref|YP_002259132.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum
IPO1609]
gi|386333044|ref|YP_006029213.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum Po82]
gi|421891466|ref|ZP_16322266.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum
K60-1]
gi|421897877|ref|ZP_16328244.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum MolK2]
gi|83727052|gb|EAP74177.1| NADH-quinone oxidoreductase chain F [Ralstonia solanacearum UW551]
gi|206589083|emb|CAQ36045.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum MolK2]
gi|206594134|emb|CAQ61061.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum
IPO1609]
gi|334195492|gb|AEG68677.1| nadh dehydrogenaseI(chain f) protein [Ralstonia solanacearum Po82]
gi|378963139|emb|CCF99014.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum
K60-1]
Length = 431
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/405 (51%), Positives = 280/405 (69%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKISPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I G M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A +EA AAG LG N GSG++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 QALEEARAAGFLGDNILGSGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GPD + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAIGPDNYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG L AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFSKLLEL-AGGMRGG-KKLKAVIPGGSSAPVVPADLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRVVDRIEHGKGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV-EHKQ 424
>gi|389807688|ref|ZP_10204225.1| NADH-quinone oxidoreductase subunit F [Rhodanobacter thiooxydans
LCS2]
gi|388443813|gb|EIL99948.1| NADH-quinone oxidoreductase subunit F [Rhodanobacter thiooxydans
LCS2]
Length = 436
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 266/378 (70%), Gaps = 5/378 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+V E+KKS LRGRGGAGFP+GLKWSFMPK Y++ N+DESEPGT KDR+I+R++P
Sbjct: 50 LVEEIKKSSLRGRGGAGFPTGLKWSFMPK--GDMQKYILCNSDESEPGTAKDRDILRYNP 107
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H ++EG IA ++ AY Y+RGE+ +E ++ E A +EAYAAGLLGKN GSG + D
Sbjct: 108 HAVIEGLAIACYCTGSTMAYNYLRGEFHHEPFEHFEAALKEAYAAGLLGKNIGGSGINVD 167
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H GAGAYICGEETAL+ESLEGK+G PR KPPFPAN GLYG PTT+ N ET A P I
Sbjct: 168 IHAALGAGAYICGEETALMESLEGKKGWPRFKPPFPANFGLYGKPTTINNTETYASVPAI 227
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
LR G DWF + G+ NN G K+F VSGHVN+P E + P +L++ GGVR G L
Sbjct: 228 LRNGADWFLNLGKPNNGGPKIFSVSGHVNRPGNFEIRLGTPFADLLEM-AGGVRNG-HKL 285
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGG+S+ +LP + MDYD+++ SGLG+ AVIVMD++T +V A R+S FY
Sbjct: 286 KAVIPGGTSMKVLPAEVMMACTMDYDSIQKAGSGLGSGAVIVMDETTCMVRACERISQFY 345
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGTGW+ ++ R+ G +++ L+ V QIEGHTICA G+AAAWP
Sbjct: 346 HMESCGQCTPCREGTGWMHRVLTRIVAGKGVPDDLHRLKAVAGQIEGHTICAFGEAAAWP 405
Query: 458 VQGLIRHFRPELERRIKE 475
VQ + H+ E E ++
Sbjct: 406 VQAFLHHYWHEFEYYVEH 423
>gi|134095026|ref|YP_001100101.1| NADH dehydrogenase I subunit F [Herminiimonas arsenicoxydans]
gi|133738929|emb|CAL61976.1| NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I subunit
F) (NDH-1 subunit F) [Herminiimonas arsenicoxydans]
Length = 431
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/401 (52%), Positives = 272/401 (67%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + K ++ +G +D ++ E+K S LRGRGGAGFPSGLKWSFMPK +G+
Sbjct: 24 LEEYVKRGGYASLKRILSEGMTSDQVIAEIKASTLRGRGGAGFPSGLKWSFMPKNYEGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R++PH ++EG IA M S Y YI GE E E
Sbjct: 83 KYLVCNSDEGEPGTFKDRDILRYNPHAVIEGMAIAAYAMGVSVGYNYIHGEIFAEYARFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A ++A AAG LG GS Y F +H +G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 143 EALEQARAAGFLGDRILGSAYSFQLHAFHGYGAYICGEETALLESIEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I + G D +A+ G+ NN GTK+F VSG V P E
Sbjct: 203 ASYGLYGKPTTINNTETFAAVPFIFQVGADAYAAMGKPNNGGTKIFSVSGDVENPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P EL+ + GGVRGG L AVIPGGSSVP++ + MDYD++ S LG
Sbjct: 263 PLGTPFAELL-KLAGGVRGG-KKLKAVIPGGSSVPVVKGDLMMATDMDYDSVAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMVHRIENGQGRAEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
ML + I+G TICALGDAAA PV+ +I +FR E E I+
Sbjct: 381 MLNSIADNIQGRTICALGDAAAMPVRAMILNFREEFEYHIE 421
>gi|344337377|ref|ZP_08768311.1| NADH-quinone oxidoreductase, F subunit [Thiocapsa marina 5811]
gi|343802330|gb|EGV20270.1| NADH-quinone oxidoreductase, F subunit [Thiocapsa marina 5811]
Length = 427
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 270/380 (71%), Gaps = 4/380 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVK S LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDR+I+R++P
Sbjct: 48 VIEEVKLSALRGRGGAGFPTGLKWSFMPRNAPGQ-KYIVCNSDEGEPGTCKDRDILRYNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG + A+ Y YIRGE+ + E A +EAYAAGLLGK+ GSG DFD+
Sbjct: 107 HQLIEGMAIAGYCIGATVGYNYIRGEFYEPIERCEEAIREAYAAGLLGKDIQGSGVDFDL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALLES+EGK+G+PR KPPFPA GLYG PTT+ N E++A P IL
Sbjct: 167 YNHLGAGAYICGEETALLESIEGKKGQPRFKPPFPAQFGLYGRPTTINNTESLASIPVIL 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WF GR NN G KLF V+GHV +P E + P ++L++ GG++ G L
Sbjct: 227 EKGGQWFLEQGRPNNGGPKLFSVTGHVARPDNFEVPLGTPFRDLLEL-AGGMKDG-RALK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVP++P I DV MDYD++ S LG+ AVIV+ + T +V + LS+FY
Sbjct: 285 AVIPGGSSVPVVPGDIMMDVDMDYDSIAKAGSMLGSGAVIVIAEGTCMVRVLHNLSHFYM 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCGQCTPCREGTGWL ++ R+ G + ++D+L V +I G TICALGDAAA PV
Sbjct: 345 HESCGQCTPCREGTGWLERVLRRILDGKGRPGDLDLLDSVAGRIGGRTICALGDAAAMPV 404
Query: 459 QGLIRHFRPELERRIKEHAE 478
Q + H+R E E I EH +
Sbjct: 405 QSFLTHYRHEFEHLI-EHGQ 423
>gi|406914579|gb|EKD53745.1| hypothetical protein ACD_60C00158G0008 [uncultured bacterium]
Length = 422
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/376 (54%), Positives = 265/376 (70%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
IV +K S LRGRGGAGFP+GLKWSF+ G+ Y++ NADE EPGTCKDR+I+R +P
Sbjct: 43 IVETLKLSALRGRGGAGFPTGLKWSFIRHDLPGQ-KYVLCNADEGEPGTCKDRDILRFNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG LIAG M A+ Y Y+RGE+ + E+A EA AG LGKN SG + ++
Sbjct: 102 HQLIEGLLIAGYAMGATVVYNYMRGEFFEPYERFEKALDEARHAGFLGKNILESGVEVEI 161
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ GAGAYICGEETAL+ESLEGK+G PR KPPFPA GLYG PTT+ NVET A P IL
Sbjct: 162 YSTLGAGAYICGEETALMESLEGKKGMPRFKPPFPAARGLYGRPTTINNVETFASVPVIL 221
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF + G+ NN G K+F V+GHVNKP E + P K+L+ + GGVR G L
Sbjct: 222 EKGAEWFLNLGKPNNGGCKIFSVTGHVNKPGNYEIPLGTPFKDLL-QMAGGVRHG-HQLK 279
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + MD+D+++ SGLG+ AVIVMD++ +V + R+S+FY
Sbjct: 280 AVIPGGSSMPVLPAETMMQLDMDFDSIQKAGSGLGSGAVIVMDETVCMVKMLTRISHFYM 339
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R++ GN LE+I+ L+ V K IEG TICA G+AAAWPV
Sbjct: 340 EESCGQCTPCREGTGWLYRLVHRIEKGNGTLEDIENLKRVAKNIEGRTICAFGEAAAWPV 399
Query: 459 QGLIRHFRPELERRIK 474
G ++HF E ++
Sbjct: 400 GGFLKHFYDEFVYHVE 415
>gi|187929288|ref|YP_001899775.1| NADH-quinone oxidoreductase subunit F [Ralstonia pickettii 12J]
gi|187726178|gb|ACD27343.1| NADH-quinone oxidoreductase, F subunit [Ralstonia pickettii 12J]
Length = 431
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/405 (51%), Positives = 280/405 (69%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKITPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I G M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A +EA AAG LG N GSG++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 QALEEARAAGFLGDNILGSGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GPD + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAIGPDNYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG L AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFSKLLEL-AGGMRGG-KKLKAVIPGGSSAPVVPADLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRVVDRIEHGKGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV-EHKQ 424
>gi|296136701|ref|YP_003643943.1| hypothetical protein Tint_2263 [Thiomonas intermedia K12]
gi|295796823|gb|ADG31613.1| hypothetical protein Tint_2263 [Thiomonas intermedia K12]
Length = 442
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/425 (49%), Positives = 282/425 (66%), Gaps = 6/425 (1%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGL 108
+++ F G + +I L G + L+G ++R + + ++ +G + ++ EVK S L
Sbjct: 11 QESCFHGRHLQPQILAGLNG-DNWALEGYLQRDGYQALRKILTEGWTPEQVIAEVKASAL 69
Query: 109 RGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIA 168
RGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH ++EG IA
Sbjct: 70 RGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHAVIEGMTIA 128
Query: 169 GVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYI 228
M + Y YI GE + E A ++A AG LG N GS + F +H +G GAYI
Sbjct: 129 AFAMGITVGYNYIHGEIFEDYDRFEEALRQARDAGYLGDNILGSNFSFQLHAAHGFGAYI 188
Query: 229 CGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASF 288
CGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G +
Sbjct: 189 CGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRHGGQAYLEV 248
Query: 289 GRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP 348
G+ NN GTK++ VSG V KP E M P +L++ GG+R G + L AVIPGGSS P
Sbjct: 249 GKPNNGGTKIYSVSGDVAKPGNYEVPMGTPFAKLLEL-AGGMREGRE-LKAVIPGGSSAP 306
Query: 349 LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPC 408
+LP I D MDYD++ S LG+ AVIV++ + +V ++ RLSYFY+HESCGQCTPC
Sbjct: 307 VLPASIMMDCTMDYDSIAKAGSMLGSGAVIVLNDTRCMVKSLMRLSYFYQHESCGQCTPC 366
Query: 409 REGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
REGTGWLW ++ R++ G ++E++D+L V+ I G TICALGDAAA PV+ ++HFRPE
Sbjct: 367 REGTGWLWRVVHRIENGQGRMEDLDLLNSVSDNIAGRTICALGDAAAMPVKSFVKHFRPE 426
Query: 469 LERRI 473
E I
Sbjct: 427 FEHHI 431
>gi|431930020|ref|YP_007243066.1| NADH-quinone oxidoreductase subunit F [Thioflavicoccus mobilis
8321]
gi|431828323|gb|AGA89436.1| NADH-quinone oxidoreductase, F subunit [Thioflavicoccus mobilis
8321]
Length = 425
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 269/377 (71%), Gaps = 3/377 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ EVK+S LRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDR+I+R+
Sbjct: 44 DALIAEVKESALRGRGGAGFPTGLKWSFMPRQAPGQ-KYIVCNSDEGEPGTCKDRDILRY 102
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+ Y YIRGE+ E A EAYAAGLLGKN GSG DF
Sbjct: 103 NPHQLIEGMAIAGYCIGATVGYNYIRGEFYEPGARFEAAVAEAYAAGLLGKNIGGSGIDF 162
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ HYGAGAYICGEETALLES+EGK+G+PR KPPFPA GL+G PTT+ N E++A P
Sbjct: 163 DIYTHYGAGAYICGEETALLESIEGKKGQPRFKPPFPAQVGLFGQPTTINNTESLASVPV 222
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL +G WF GR NN G KLF VSGHV KP E + P K+L++ GGV+GG
Sbjct: 223 ILEKGGKWFLEQGRPNNGGPKLFSVSGHVEKPGNFEVPLGTPFKDLLEL-AGGVKGG-KR 280
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSSVP++P MDYD++ S LG+ AVIV+ + T +V ++ L++F
Sbjct: 281 LKAVIPGGSSVPVVPGETMMKTDMDYDSVAKAGSMLGSGAVIVIAEGTCMVKVLSNLAHF 340
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGWL ++ R++ G + E++ +L V +I G TICALGDAAA
Sbjct: 341 YAHESCGQCTPCREGTGWLARVLHRIEHGEGRREDLALLDSVAGRIGGRTICALGDAAAM 400
Query: 457 PVQGLIRHFRPELERRI 473
PVQ ++H+R E E I
Sbjct: 401 PVQSFLKHYRHEFEHLI 417
>gi|387792846|ref|YP_006257911.1| NADH-quinone oxidoreductase subunit F [Solitalea canadensis DSM
3403]
gi|379655679|gb|AFD08735.1| NADH-quinone oxidoreductase, F subunit [Solitalea canadensis DSM
3403]
Length = 453
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/399 (52%), Positives = 274/399 (68%), Gaps = 14/399 (3%)
Query: 89 KDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTC 148
K L D +V EVKKSGLRGRGGAGFP+G+KWSF+ K +G P YLV NADESEPGT
Sbjct: 32 KALKTMSPDDVVEEVKKSGLRGRGGAGFPTGMKWSFLAK-PEGVPRYLVCNADESEPGTF 90
Query: 149 KDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKN 208
KDR +M H PH L+EG +++ + A+ +YIY+RGE + + + LERA EA AG LGKN
Sbjct: 91 KDRYLMTHTPHTLIEGMIVSSFALGANTSYIYVRGEMMPQIRILERAIAEAKNAGFLGKN 150
Query: 209 ACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNV 268
G+GYD ++++ G GAYICGEETALLESLEGK+G PR+KPPFPA AGLYGCPT V NV
Sbjct: 151 ILGTGYDLEIYVQPGGGAYICGEETALLESLEGKRGNPRIKPPFPAIAGLYGCPTVVNNV 210
Query: 269 ETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI--DRH 326
E++A I+ G D +A G ++GTKL SG++NKP E E+ +P++E I D +
Sbjct: 211 ESIAAVSWIILNGGDEYAKIGVGRSTGTKLISASGNINKPGVYEIELGVPVEEFIYSDEY 270
Query: 327 CGGVRGGWDNLLAVIPGGSSVPLLPKHICDDV------LMDYDALK----AVQSGLGTAA 376
CGG+ G L AV+ GGSSVP+LP ++ + LM Y++L + LG+
Sbjct: 271 CGGITNG-KRLKAVVAGGSSVPILPANLILKLANGQPRLMSYESLAEGGFVTGTMLGSGG 329
Query: 377 VIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQ 436
+VMD+ VV S FY HESCGQC+PCREGTGW+ ++ R++ G+ K+ +ID+L
Sbjct: 330 FVVMDEDACVVRNTWNFSRFYHHESCGQCSPCREGTGWMEKVLHRIEYGHGKMSDIDLLV 389
Query: 437 EVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+V+K+IEG+TIC LGDAAAWPV IRHFR E E +KE
Sbjct: 390 DVSKKIEGNTICPLGDAAAWPVASAIRHFRDEFEWHVKE 428
>gi|291613543|ref|YP_003523700.1| NADH-quinone oxidoreductase, F subunit [Sideroxydans lithotrophicus
ES-1]
gi|291583655|gb|ADE11313.1| NADH-quinone oxidoreductase, F subunit [Sideroxydans lithotrophicus
ES-1]
Length = 420
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/376 (55%), Positives = 264/376 (70%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ EVK SGLRGRGGAGFP+GLKWSFMP+ G YLV N+DE EPGTCKDR+I+R++P
Sbjct: 42 IIAEVKASGLRGRGGAGFPTGLKWSFMPRNYQG-DKYLVCNSDEGEPGTCKDRDILRYNP 100
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG IA M Y Y+ GE + +E A +EA AG LGKN G ++FD+
Sbjct: 101 HLLIEGMAIAAYTMDVKTGYNYVHGEIFEAYERMEEACEEARKAGYLGKNIMGFDFEFDL 160
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H H G GAY+CGEETALLES+EGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+
Sbjct: 161 HNHMGYGAYVCGEETALLESIEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASIPYII 220
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G N+ G KLF VSGHVN P E + P +L++ GGVR G L
Sbjct: 221 REGGQKFAGLGVTNSGGVKLFSVSGHVNNPGNFEMPLGTPFMKLLEM-AGGVRNG-HKLK 278
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP I + MD+D+++ S LGT A+IVMD++T +V A+ RLSYFY
Sbjct: 279 AVIPGGSSMPVLPAEIMMGLNMDFDSIQKAGSYLGTGAIIVMDETTCMVKALERLSYFYF 338
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R++ G + E++D+L ++ I G TICALGDAAAWPV
Sbjct: 339 EESCGQCTPCREGTGWLYRIIHRIEHGEGRPEDLDLLLDLCGNIAGRTICALGDAAAWPV 398
Query: 459 QGLIRHFRPELERRIK 474
QG ++H+R E E I+
Sbjct: 399 QGFLKHYRAEFEYHIE 414
>gi|416167969|ref|ZP_11607799.1| NADH:quinone oxidoreductase, F subunit [Neisseria meningitidis
OX99.30304]
gi|325130975|gb|EGC53702.1| NADH:quinone oxidoreductase, F subunit [Neisseria meningitidis
OX99.30304]
Length = 431
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/400 (53%), Positives = 269/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ V S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKVGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|195027493|ref|XP_001986617.1| GH21461 [Drosophila grimshawi]
gi|193902617|gb|EDW01484.1| GH21461 [Drosophila grimshawi]
Length = 546
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/423 (51%), Positives = 277/423 (65%), Gaps = 2/423 (0%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGR 111
K+ FG LKD DRIF NLYG HD LKGA +RGDW+RT DL+ GA+WIV+EVK+SGLRGR
Sbjct: 120 KSEFGPLKDCDRIFQNLYGFHDWRLKGACQRGDWYRTADLLDMGANWIVDEVKRSGLRGR 179
Query: 112 GGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVG 171
GG+G+ +G KW F+ KV + L++N E EPGTCKDREI+RH+PHK++EGCL+AG
Sbjct: 180 GGSGYYTGNKWEFLQKV-NANNKILILNCAEGEPGTCKDREILRHEPHKIIEGCLLAGYA 238
Query: 172 MRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGE 231
M IY+R + NE NL+ A EAY GLLG NAC +G FD+ + G Y+ GE
Sbjct: 239 MGCEKCIIYVRNCFYNEACNLQFALAEAYRYGLLGCNACDTGIKFDIQVQRG-DRYLSGE 297
Query: 232 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 291
ETAL+ L GK +PR +PP+ G + P V N ET+AV PTILRRG WF GR
Sbjct: 298 ETALVNCLMGKLARPRKRPPYLHEQGYFDHPCLVLNTETLAVVPTILRRGAKWFTGLGRN 357
Query: 292 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP 351
N GTKLF + GHV PCTVEEEMS+PL+E+ID H GGV GGW+NLL V PGG S PL+
Sbjct: 358 MNFGTKLFSICGHVQHPCTVEEEMSMPLREIIDMHAGGVCGGWNNLLGVFPGGLSSPLIG 417
Query: 352 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 411
K + +LMDYD L+ S GT +IV+ + D + + R FY ++C QCTPCR+G
Sbjct: 418 KVGAEGLLMDYDCLQKAGSSFGTGGIIVVSNNCDPLLVMQRSIEFYMKQTCKQCTPCRDG 477
Query: 412 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 471
WL I+ G + + ID + + K + G TIC L D+ A GLI HF P +++
Sbjct: 478 AIWLPKILRNFTKGESVPQMIDFVAVICKTMIGTTICGLSDSQANVAMGLITHFAPHIQQ 537
Query: 472 RIK 474
RI+
Sbjct: 538 RIE 540
>gi|261856545|ref|YP_003263828.1| NADH-quinone oxidoreductase subunit F [Halothiobacillus
neapolitanus c2]
gi|261837014|gb|ACX96781.1| NADH-quinone oxidoreductase, F subunit [Halothiobacillus
neapolitanus c2]
Length = 429
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/414 (51%), Positives = 280/414 (67%), Gaps = 7/414 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGAD--WIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +K G + + ++ + D I+ E+K S LRGRGGAGFP+GLKWSFMP+ + G+
Sbjct: 18 LESYLKTGGYSAWRKILAEKTDPALIIEELKTSNLRGRGGAGFPTGLKWSFMPRNAPGQ- 76
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVN-ERKNL 192
Y+V N+DESEPGT KDR+I+ ++PH L+EG IAG + A+ Y Y+RGE+ + +
Sbjct: 77 KYVVCNSDESEPGTAKDRQILLNNPHALVEGMAIAGYTIGATVGYNYMRGEFTDLVFRRF 136
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
E A +EAY GLLGKN GSG DFD++ GAGAYICGEETALLESLEGK+G+PR KPPF
Sbjct: 137 ETAVKEAYELGLLGKNLQGSGIDFDLYGSLGAGAYICGEETALLESLEGKKGQPRFKPPF 196
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PAN GLYG PTTV N ET++ P I+R G WFA G N+ G KLF VSGHVNKP E
Sbjct: 197 PANFGLYGRPTTVNNTETLSSVPAIMRNGGQWFADLGVPNSGGLKLFSVSGHVNKPGVFE 256
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
M +P EL+ GGVR G L AVIPGG+S P++P + MDYD++ + L
Sbjct: 257 IPMGLPFSELLS-MAGGVREG-RKLKAVIPGGTSTPVVPGSVMMQTNMDYDSIAKSGTFL 314
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
G+ +IV+D S +V+A+ R+S FY ESCGQCTPCREGTGWL+ ++ R+ G + ++
Sbjct: 315 GSGGLIVIDDSACMVEALRRISRFYYSESCGQCTPCREGTGWLYRMLTRVVEGKGAMADL 374
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEATA 486
+ L +V +IEG TICALGDAAA PV+ ++HFR E E I EH + + A
Sbjct: 375 NRLDDVASKIEGRTICALGDAAAVPVRSFLKHFRHEFEYYI-EHGHSMIADGLA 427
>gi|119897692|ref|YP_932905.1| putative NADH-ubiquinone oxidoreductase subunit F [Azoarcus sp.
BH72]
gi|119670105|emb|CAL94018.1| putative NADH-ubiquinone oxidoreductase chain F [Azoarcus sp. BH72]
Length = 439
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/401 (52%), Positives = 272/401 (67%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ + RG + K ++ + + I+ E+K S LRGRGGAGFP+GLKWSFMP+ G
Sbjct: 19 LQDYIGRGGYSALKKIIAEKIPPETIIAELKASALRGRGGAGFPTGLKWSFMPRSFPGD- 77
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YL N+DE EPGT KDR+I+R++PH ++EG +IA M A+ Y YI GE + E
Sbjct: 78 KYLACNSDEGEPGTFKDRDILRYNPHTVIEGMVIAAYAMGATRGYNYIHGEVFELYQRFE 137
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EA AGL+G+N GS + F++ H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 138 EALDEARQAGLVGQNILGSEFSFELFAHHGYGAYICGEETALLESIEGKKGQPRFKPPFP 197
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+ G + F + G+ NN GTKLF +SGHVN+P E
Sbjct: 198 ASYGLYGKPTTINNTETFASVPFIINLGGEGFLNLGKPNNGGTKLFSISGHVNRPGVYEI 257
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P EL++ GG+RGG L AVIPGGSS P+LP I D MDYD++ S LG
Sbjct: 258 NLGTPFSELLEM-AGGMRGG-RKLKAVIPGGSSAPVLPGDIMMDCTMDYDSISKAGSMLG 315
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V A+ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + +++D
Sbjct: 316 SGAVIVMDETVCMVKALERLSYFYFEESCGQCTPCREGTGWLYRVVHRIENGLGRPDDLD 375
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L VT I G TICALGDAA+ PVQ I+HF E E I+
Sbjct: 376 LLNSVTGNIMGRTICALGDAASMPVQSFIKHFGAEFEYHIE 416
>gi|292493663|ref|YP_003529102.1| NADH-quinone oxidoreductase subunit F [Nitrosococcus halophilus
Nc4]
gi|291582258|gb|ADE16715.1| NADH-quinone oxidoreductase, F subunit [Nitrosococcus halophilus
Nc4]
Length = 427
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/375 (57%), Positives = 266/375 (70%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N+DE EPGT KDR+IMR++P
Sbjct: 45 IIEEVKASGLRGRGGAGFPTGLKWSFMPQNLPGT-KYIVCNSDEGEPGTFKDRDIMRYNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG + A+A Y YIRGE+V E A +EAY AGLLGKN GSG DFD+
Sbjct: 104 HQLIEGMAIAGYAIGATAGYNYIRGEFVEPIDRFEAALEEAYEAGLLGKNILGSGIDFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALLESLEGK+G PR KPPFPA GLYG PTT+ N E++A P IL
Sbjct: 164 YSHPGAGAYICGEETALLESLEGKKGMPRYKPPFPAGFGLYGRPTTINNTESLASVPVIL 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WF G + GTK+F VSGHVN+P E M P K+L++ GG+R G + L
Sbjct: 224 EKGGQWFLKLGTPTSGGTKIFSVSGHVNRPGNYEVPMGTPFKDLLEL-AGGMRNG-NALK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGG+SVP++P MDYD+L S LG +VI+MD++T +V A+ R+S FY
Sbjct: 282 AVIPGGTSVPVMPAEAIMAANMDYDSLAKAGSLLGAGSVIIMDETTCMVRALERISAFYY 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R++ G E++D L V + I+GHTICALGDAAA PV
Sbjct: 342 EESCGQCTPCREGTGWLYRVVRRIEHGQGTQEDLDKLVNVAQNIDGHTICALGDAAAAPV 401
Query: 459 QGLIRHFRPELERRI 473
I+HFR E + I
Sbjct: 402 ISFIQHFRDEFQYHI 416
>gi|195402651|ref|XP_002059918.1| GJ15106 [Drosophila virilis]
gi|194140784|gb|EDW57255.1| GJ15106 [Drosophila virilis]
Length = 501
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/457 (48%), Positives = 296/457 (64%), Gaps = 6/457 (1%)
Query: 24 SVGLRSFSTQGASTASTPQPPPPPP----PPEKTHFGGLKDEDRIFTNLYGMHDPFLKGA 79
+ G S +T A+ A + PPP KT FG L D DRIF NLYG D LKGA
Sbjct: 40 NAGKMSKNTAAATPAKACEEKAPPPAGMLSNTKTDFGPLTDCDRIFQNLYGRLDWRLKGA 99
Query: 80 MKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 139
RGDW+RT DL+ G WI++EVK+SGLRGRGG+G+ +G KW + KV + + L++N
Sbjct: 100 CARGDWYRTADLLEMGPQWIMDEVKRSGLRGRGGSGYYAGSKWEQLQKV-ESKDKILILN 158
Query: 140 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEA 199
E EPGTCKDREI+RH+PHK++EGCL+AG M IY+R + NE NL+ A EA
Sbjct: 159 CAEGEPGTCKDREILRHEPHKIIEGCLLAGFAMGCEKCIIYVRNRFYNEACNLQFALAEA 218
Query: 200 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 259
Y GL+G N+C +G F++H+ G Y+ GEETAL+ L GK +PR +PP+ G +
Sbjct: 219 YRYGLIGCNSCDTGIKFEIHVQRG-DRYLTGEETALVNCLMGKLARPRKRPPYLHEKGYF 277
Query: 260 GCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 319
P+TV N E++AV PTILRRG WF S GR N GTKLF +SGHV PCTVEEEMS+PL
Sbjct: 278 DHPSTVINTESLAVVPTILRRGAKWFTSLGRNMNFGTKLFNISGHVLHPCTVEEEMSMPL 337
Query: 320 KELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 379
+++I+ H GGV GGW+NLLAV PGG S PL+ + ++VLMDYDAL+A S LGT +IV
Sbjct: 338 RDIIEMHAGGVCGGWNNLLAVWPGGLSTPLIGRAAAEEVLMDYDALEAKGSELGTGGIIV 397
Query: 380 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 439
+ D + + FY ++C QCTPCR+G WL I + G + ++ ++ ++
Sbjct: 398 VCNDCDPLLVMQHTIEFYMKQTCKQCTPCRDGAIWLPEIFKNFTRGESVPHMMEFIEVIS 457
Query: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
K + G TICAL D+ A +GLI+HF P +E RI E+
Sbjct: 458 KTMTGTTICALSDSQANVARGLIQHFGPYIEERIIEY 494
>gi|421560402|ref|ZP_16006261.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM2657]
gi|402340575|gb|EJU75775.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM2657]
Length = 433
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/405 (52%), Positives = 271/405 (66%), Gaps = 11/405 (2%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPEL------ERRIKEH 476
V KQ+ G TICAL DAA +PV+ +HFR E R +KEH
Sbjct: 384 VGKQMAGRTICALADAAVFPVRSFTKHFRDEFVHYIEHGRPMKEH 428
>gi|121609757|ref|YP_997564.1| NADH-quinone oxidoreductase subunit F [Verminephrobacter eiseniae
EF01-2]
gi|121554397|gb|ABM58546.1| NADH-quinone oxidoreductase, F subunit [Verminephrobacter eiseniae
EF01-2]
Length = 452
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/381 (54%), Positives = 261/381 (68%), Gaps = 3/381 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I++
Sbjct: 67 DQVLAMVKESGLRGRGGAGFPTGLKWSFMPRSFPGQ-KYLVCNSDEGEPGTCKDRDILQF 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG LIA M S Y YI GE + E A EA AAG LG GSG+DF
Sbjct: 126 NPHIVIEGMLIAAYAMGISVGYNYIHGEIFKTYERFEVALDEARAAGYLGHGILGSGFDF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFP + GLYG PTT+ N ET A P
Sbjct: 186 QLHASHGFGAYICGEETALLESLEGKKGQPRFKPPFPVSYGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG V P E + P +L++ GGVR G
Sbjct: 246 IMRHGAAAYLECGKPNNGGTKIFSVSGDVELPGNYEVPLGTPFAKLLEL-AGGVRQG-RR 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP MDYDA+ S LG+ AVIV+D S D+V+++ RLSYF
Sbjct: 304 LKAVIPGGSSAPVLPAAAMMACTMDYDAIAKAGSMLGSGAVIVLDDSRDMVESLWRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGW+W +++R++ G + ++++L V I+G TICALGDAAA
Sbjct: 364 YMHESCGQCTPCREGTGWMWRVIDRIRHGQGRAGDLELLNSVADNIQGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPELERRIKEHA 477
PV+ +I+HFRPE E I + A
Sbjct: 424 PVRAMIKHFRPEFEALIGKPA 444
>gi|313669280|ref|YP_004049564.1| NADH dehydrogenase I subunit F [Neisseria lactamica 020-06]
gi|313006742|emb|CBN88212.1| NADH dehydrogenase I chain F [Neisseria lactamica 020-06]
Length = 431
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFESALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|255067286|ref|ZP_05319141.1| NADH oxidoreductase, F subunit [Neisseria sicca ATCC 29256]
gi|255048437|gb|EET43901.1| NADH oxidoreductase, F subunit [Neisseria sicca ATCC 29256]
Length = 431
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYSALRRILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET A P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFASVPFIVRDGGQTFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEIL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|149927546|ref|ZP_01915800.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Limnobacter
sp. MED105]
gi|149823819|gb|EDM83045.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Limnobacter
sp. MED105]
Length = 420
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/400 (51%), Positives = 268/400 (67%), Gaps = 5/400 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
LKG RG + + ++ +G ++ EVKKS LRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 13 LKGYEARGGYKALRKILTEGISQEDVIAEVKKSALRGRGGAGFPTGLKWSFMPRQFPGQ- 71
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YL N+DE EPGT KDR+I+R++PH ++EG IA M S Y YI GE + E
Sbjct: 72 KYLACNSDEGEPGTFKDRDILRYNPHSVIEGMAIAAYAMGISVGYNYIHGEIWETYERFE 131
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A ++A AAG LG N GS + F +H H G GAYICGEETAL+ES+EGK+G+PR KPPFP
Sbjct: 132 EALEQARAAGYLGDNIMGSKFSFQLHAHQGYGAYICGEETALIESIEGKKGQPRFKPPFP 191
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ G+YG PTT+ N ET A P I++ G DWF G+ NN GTK+F +SG V KP E
Sbjct: 192 ASYGIYGKPTTINNTETFAAVPFIIQNGGDWFLELGKPNNGGTKIFSISGDVEKPGNYEI 251
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG++GG + AVIPGGSS+P+LP + MDYD++ S LG
Sbjct: 252 PLGTPFATLLEM-AGGMKGG-RKIKAVIPGGSSMPVLPGDVMMATDMDYDSIAKAGSMLG 309
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ I+ R++ G + E++D
Sbjct: 310 SGAVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTGWLYRIINRIEHGEGRPEDLD 369
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
ML + I+G TICALGDAAA PV+ ++HF E E I
Sbjct: 370 MLNSIADNIQGRTICALGDAAAMPVRAFLKHFHEEFEHHI 409
>gi|421562466|ref|ZP_16008293.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM2795]
gi|421907555|ref|ZP_16337430.1| NADH dehydrogenase I chain F [Neisseria meningitidis alpha704]
gi|393291224|emb|CCI73424.1| NADH dehydrogenase I chain F [Neisseria meningitidis alpha704]
gi|402343122|gb|EJU78277.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM2795]
Length = 431
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIVRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEIL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIIMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|385323391|ref|YP_005877830.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F;
NDH-1, chain F) [Neisseria meningitidis 8013]
gi|261391778|emb|CAX49233.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F;
NDH-1, chain F) [Neisseria meningitidis 8013]
Length = 431
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|398803089|ref|ZP_10562199.1| NADH-quinone oxidoreductase, F subunit [Polaromonas sp. CF318]
gi|398097297|gb|EJL87607.1| NADH-quinone oxidoreductase, F subunit [Polaromonas sp. CF318]
Length = 464
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/441 (50%), Positives = 283/441 (64%), Gaps = 10/441 (2%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA------DWIVNEVKK 105
+T F G +I +L G + LK RG + + ++ + D ++ EVK
Sbjct: 26 QTCFHGRHINPQILADLNG-SNWRLKDYEARGGYQALRKILKQDGGEGMTPDQVIAEVKA 84
Query: 106 SGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
LRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+IM+++PH ++EG
Sbjct: 85 GSLRGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTCKDRDIMQYNPHSVIEGM 143
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
IA M S Y YI GE + E A +EA AAGLLG N GSG+ F +H +G G
Sbjct: 144 AIAAYAMGISVGYNYIHGEIFATYQRFEEALEEARAAGLLGNNIFGSGFSFQLHASHGFG 203
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G +
Sbjct: 204 AYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAY 263
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
G+ NN GTK++ VSG V P E M P +L++ GGVR G L AVIPGGS
Sbjct: 264 LECGKPNNGGTKIYSVSGDVELPGNYEVPMGTPFSKLLEL-AGGVRKG-RTLKAVIPGGS 321
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S P+LP I + MDYD++ S LG+ AVIVMD S +V+++ RLSYFY HESCGQC
Sbjct: 322 SAPVLPASIMMECTMDYDSIAKAGSMLGSGAVIVMDDSRCMVESLKRLSYFYMHESCGQC 381
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREGTGWLW +++R+ G+ K ++D+L V I+G TICALGDAAA PV+ +I+HF
Sbjct: 382 TPCREGTGWLWRVVDRIHNGHGKQTDMDLLNSVADNIQGRTICALGDAAAMPVRAMIKHF 441
Query: 466 RPELERRIKEHAERELLEATA 486
R E E IK + A A
Sbjct: 442 RHEFEAMIKPQVSHAPVSAAA 462
>gi|15676170|ref|NP_273302.1| NADH dehydrogenase I subunit F [Neisseria meningitidis MC58]
gi|385852445|ref|YP_005898959.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
H44/76]
gi|416194957|ref|ZP_11617538.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
CU385]
gi|421556237|ref|ZP_16002154.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
80179]
gi|427826973|ref|ZP_18994018.1| NADH oxidoreductase, F subunit [Neisseria meningitidis H44/76]
gi|433464230|ref|ZP_20421724.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM422]
gi|433487435|ref|ZP_20444614.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
M13255]
gi|433489609|ref|ZP_20446748.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM418]
gi|433504044|ref|ZP_20460989.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
9506]
gi|433506290|ref|ZP_20463209.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
9757]
gi|433508456|ref|ZP_20465342.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
12888]
gi|433510507|ref|ZP_20467350.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
4119]
gi|7225468|gb|AAF40700.1| NADH dehydrogenase I, F subunit [Neisseria meningitidis MC58]
gi|316985174|gb|EFV64126.1| NADH oxidoreductase, F subunit [Neisseria meningitidis H44/76]
gi|325141082|gb|EGC63585.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
CU385]
gi|325199449|gb|ADY94904.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
H44/76]
gi|389604878|emb|CCA43804.1| NADH dehydrogenase I chain F [Neisseria meningitidis alpha522]
gi|402338090|gb|EJU73329.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
80179]
gi|432206040|gb|ELK62055.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM422]
gi|432226200|gb|ELK81933.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
M13255]
gi|432230605|gb|ELK86280.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM418]
gi|432243427|gb|ELK98938.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
9506]
gi|432244306|gb|ELK99801.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
9757]
gi|432250107|gb|ELL05505.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
12888]
gi|432250575|gb|ELL05968.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
4119]
Length = 433
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|333913095|ref|YP_004486827.1| NADH-quinone oxidoreductase subunit F [Delftia sp. Cs1-4]
gi|333743295|gb|AEF88472.1| NADH-quinone oxidoreductase, F subunit [Delftia sp. Cs1-4]
Length = 452
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/388 (54%), Positives = 271/388 (69%), Gaps = 3/388 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ +LV N+DE EPGTCKDR+I+ H
Sbjct: 68 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRQFPGQ-KHLVCNSDEGEPGTCKDRDILVH 126
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG N GS + F
Sbjct: 127 NPHIVIEGMIIAAYAMGISLGYNYIHGEIFEAYERFEAALEEARAAGYLGDNIMGSSFSF 186
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 187 QLHAHHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 246
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG VN P E + P +L++ GGVR G
Sbjct: 247 IIRNGGAAYLECGKPNNGGTKIFSVSGDVNLPGNYEVPLGTPFSKLLEL-AGGVRTG-RK 304
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD S D+V+++ RLSYF
Sbjct: 305 LKAVIPGGSSSPVLPADIIMECTMDYDSIAKAGSMLGSGAVIVMDDSRDMVESLLRLSYF 364
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y+HESCGQCTPCREGTGWLW ++ R++ G + E+I++L V+ I G TICALGDAAA
Sbjct: 365 YQHESCGQCTPCREGTGWLWRVVNRIEHGEGRPEDIELLDSVSVNIMGRTICALGDAAAM 424
Query: 457 PVQGLIRHFRPELERRIKEHAERELLEA 484
PV+ +I+HFR E E +I+ +++ + A
Sbjct: 425 PVRAMIKHFRHEFEAKIQNASKQAVHAA 452
>gi|160900607|ref|YP_001566189.1| NADH-quinone oxidoreductase subunit F [Delftia acidovorans SPH-1]
gi|160366191|gb|ABX37804.1| NADH-quinone oxidoreductase, F subunit [Delftia acidovorans SPH-1]
Length = 452
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/388 (54%), Positives = 271/388 (69%), Gaps = 3/388 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ +LV N+DE EPGTCKDR+I+ H
Sbjct: 68 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRQFPGQ-KHLVCNSDEGEPGTCKDRDILVH 126
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG N GS + F
Sbjct: 127 NPHIVIEGMIIAAYAMGISLGYNYIHGEIFEAYERFEAALEEARAAGYLGDNIMGSSFSF 186
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 187 QLHAHHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 246
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG VN P E + P +L++ GGVR G
Sbjct: 247 IIRNGGAAYLECGKPNNGGTKIFSVSGDVNLPGNYEVPLGTPFSKLLEL-AGGVRTG-RK 304
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD S D+V+++ RLSYF
Sbjct: 305 LKAVIPGGSSSPVLPADIIMECTMDYDSIAKAGSMLGSGAVIVMDDSRDMVESLLRLSYF 364
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y+HESCGQCTPCREGTGWLW ++ R++ G + E+I++L V+ I G TICALGDAAA
Sbjct: 365 YQHESCGQCTPCREGTGWLWRVVNRIEHGEGRPEDIELLDSVSVNIMGRTICALGDAAAM 424
Query: 457 PVQGLIRHFRPELERRIKEHAERELLEA 484
PV+ +I+HFR E E +I+ +++ + A
Sbjct: 425 PVRAMIKHFRHEFEAKIQNASKQTVNAA 452
>gi|218678678|ref|ZP_03526575.1| NADH dehydrogenase I subunit F [Rhizobium etli CIAT 894]
Length = 269
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/269 (72%), Positives = 226/269 (84%), Gaps = 1/269 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC++A M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVVASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF++ GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSAIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLKELIDRH 326
LF +SGHVNKPCTVEEEM I +EL+DRH
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFRELVDRH 269
>gi|349608697|ref|ZP_08888120.1| NADH oxidoreductase, F subunit [Neisseria sp. GT4A_CT1]
gi|348611554|gb|EGY61198.1| NADH oxidoreductase, F subunit [Neisseria sp. GT4A_CT1]
Length = 433
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/397 (52%), Positives = 267/397 (67%), Gaps = 5/397 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET A P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFASVPFIVRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEIL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
V Q+ G TICAL DAA +PV+ +HFR E I+
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFREEFVHYIE 420
>gi|261364352|ref|ZP_05977235.1| NADH oxidoreductase, F subunit [Neisseria mucosa ATCC 25996]
gi|288567616|gb|EFC89176.1| NADH oxidoreductase, F subunit [Neisseria mucosa ATCC 25996]
Length = 433
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 258/376 (68%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 VIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E A ++A AAG LGKN GS ++F++
Sbjct: 107 HALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEVALEQARAAGFLGKNILGSDFEFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASVPFIV 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G N GTKLFC+SGHV +P E + P E++ + GG+RGG L
Sbjct: 227 RDGGQTFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEIL-KMAGGMRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYY 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L V Q+ G TICAL DAA +PV
Sbjct: 345 DESCGQCTPCREGTGWLYRIIHRIVEGKGRMEDLDLLDSVGNQMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIK 474
+ +HFR E I+
Sbjct: 405 RSFTKHFREEFVHYIE 420
>gi|59802067|ref|YP_208779.1| hypothetical protein NGO1746 [Neisseria gonorrhoeae FA 1090]
gi|194099642|ref|YP_002002773.1| NuoF [Neisseria gonorrhoeae NCCP11945]
gi|240014998|ref|ZP_04721911.1| NuoF [Neisseria gonorrhoeae DGI18]
gi|240017446|ref|ZP_04723986.1| NuoF [Neisseria gonorrhoeae FA6140]
gi|240122067|ref|ZP_04735029.1| NuoF [Neisseria gonorrhoeae PID24-1]
gi|254494622|ref|ZP_05107793.1| NADH dehydrogenase I [Neisseria gonorrhoeae 1291]
gi|268595649|ref|ZP_06129816.1| NADH dehydrogenase subunit I F [Neisseria gonorrhoeae 35/02]
gi|268597681|ref|ZP_06131848.1| NADH dehydrogenase subunit I F [Neisseria gonorrhoeae FA19]
gi|268599933|ref|ZP_06134100.1| NADH dehydrogenase I [Neisseria gonorrhoeae MS11]
gi|268602267|ref|ZP_06136434.1| NADH dehydrogenase I [Neisseria gonorrhoeae PID18]
gi|268604533|ref|ZP_06138700.1| NADH dehydrogenase I [Neisseria gonorrhoeae PID1]
gi|268682988|ref|ZP_06149850.1| NADH dehydrogenase I [Neisseria gonorrhoeae PID332]
gi|268685153|ref|ZP_06152015.1| NADH dehydrogenase I [Neisseria gonorrhoeae SK-92-679]
gi|268687416|ref|ZP_06154278.1| NADH dehydrogenase I [Neisseria gonorrhoeae SK-93-1035]
gi|291042882|ref|ZP_06568623.1| NADH-quinone oxidoreductase subunit F [Neisseria gonorrhoeae DGI2]
gi|293398107|ref|ZP_06642312.1| NADH oxidoreductase (quinone), F subunit [Neisseria gonorrhoeae
F62]
gi|385336584|ref|YP_005890531.1| hypothetical protein NGTW08_1711 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|59718962|gb|AAW90367.1| putative NADH dehydrogenase I chain F [Neisseria gonorrhoeae FA
1090]
gi|193934932|gb|ACF30756.1| NuoF [Neisseria gonorrhoeae NCCP11945]
gi|226513662|gb|EEH63007.1| NADH dehydrogenase I [Neisseria gonorrhoeae 1291]
gi|268549038|gb|EEZ44456.1| NADH dehydrogenase subunit I F [Neisseria gonorrhoeae 35/02]
gi|268551469|gb|EEZ46488.1| NADH dehydrogenase subunit I F [Neisseria gonorrhoeae FA19]
gi|268584064|gb|EEZ48740.1| NADH dehydrogenase I [Neisseria gonorrhoeae MS11]
gi|268586398|gb|EEZ51074.1| NADH dehydrogenase I [Neisseria gonorrhoeae PID18]
gi|268588664|gb|EEZ53340.1| NADH dehydrogenase I [Neisseria gonorrhoeae PID1]
gi|268623272|gb|EEZ55672.1| NADH dehydrogenase I [Neisseria gonorrhoeae PID332]
gi|268625437|gb|EEZ57837.1| NADH dehydrogenase I [Neisseria gonorrhoeae SK-92-679]
gi|268627700|gb|EEZ60100.1| NADH dehydrogenase I [Neisseria gonorrhoeae SK-93-1035]
gi|291013316|gb|EFE05282.1| NADH-quinone oxidoreductase subunit F [Neisseria gonorrhoeae DGI2]
gi|291611370|gb|EFF40440.1| NADH oxidoreductase (quinone), F subunit [Neisseria gonorrhoeae
F62]
gi|317165127|gb|ADV08668.1| hypothetical protein NGTW08_1711 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 433
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVRRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFAHYI-EHG 422
>gi|134301251|ref|YP_001121219.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421750968|ref|ZP_16188027.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis AS_713]
gi|421752824|ref|ZP_16189835.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 831]
gi|421756556|ref|ZP_16193460.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 80700103]
gi|421758421|ref|ZP_16195268.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 70102010]
gi|424673659|ref|ZP_18110593.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 70001275]
gi|134049028|gb|ABO46099.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis WY96-3418]
gi|409089186|gb|EKM89238.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 831]
gi|409089279|gb|EKM89330.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis AS_713]
gi|409092319|gb|EKM92295.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 70102010]
gi|409093425|gb|EKM93370.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 80700103]
gi|417435654|gb|EKT90533.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 70001275]
Length = 424
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 262/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGIAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 220 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGVRNG-NK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCIVRTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC+LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICSLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 398 PVQSYIDKFRHEFVYMIENN 417
>gi|385850508|ref|YP_005897023.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M04-240196]
gi|416181443|ref|ZP_11611637.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M13399]
gi|416211697|ref|ZP_11621503.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M01-240013]
gi|416211762|ref|ZP_11621516.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M01-240013]
gi|325135049|gb|EGC57677.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M13399]
gi|325145239|gb|EGC67518.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M01-240013]
gi|325145310|gb|EGC67588.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M01-240013]
gi|325205331|gb|ADZ00784.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M04-240196]
Length = 433
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 259/379 (68%), Gaps = 4/379 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 VIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E A ++A AAG LGKN GS ++F++
Sbjct: 107 HALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGSDFEFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET + P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFSSVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G N GTKLFC+SGHV +P E + P E++ + GG+RGG L
Sbjct: 227 RDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVL-KMAGGMRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYY 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L V Q+ G TICAL DAA +PV
Sbjct: 345 DESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHA 477
+ +HFR E I EH
Sbjct: 405 RSFTKHFRDEFVHYI-EHG 422
>gi|416159334|ref|ZP_11605798.1| NADH:quinone oxidoreductase, F subunit [Neisseria meningitidis
N1568]
gi|433472629|ref|ZP_20429999.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
97021]
gi|433481053|ref|ZP_20438325.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2006087]
gi|433483175|ref|ZP_20440413.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2002038]
gi|433485276|ref|ZP_20442482.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
97014]
gi|325129044|gb|EGC51894.1| NADH:quinone oxidoreductase, F subunit [Neisseria meningitidis
N1568]
gi|432212513|gb|ELK68451.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
97021]
gi|432219406|gb|ELK75253.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2006087]
gi|432223621|gb|ELK79401.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2002038]
gi|432224736|gb|ELK80499.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
97014]
Length = 431
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 259/379 (68%), Gaps = 4/379 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 VIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E A ++A AAG LGKN GS ++F++
Sbjct: 107 HALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGSDFEFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET + P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFSSVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G N GTKLFC+SGHV +P E + P E++ + GG+RGG L
Sbjct: 227 RDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVL-KMVGGMRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYY 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L V Q+ G TICAL DAA +PV
Sbjct: 345 DESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHA 477
+ +HFR E I EH
Sbjct: 405 RSFTKHFRDEFVHYI-EHG 422
>gi|296313741|ref|ZP_06863682.1| NADH oxidoreductase, F subunit [Neisseria polysaccharea ATCC 43768]
gi|296839664|gb|EFH23602.1| NADH oxidoreductase, F subunit [Neisseria polysaccharea ATCC 43768]
Length = 431
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADWI--VNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + I ++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQIDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+ Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 IGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|410694431|ref|YP_003625053.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Thiomonas sp. 3As]
gi|294340856|emb|CAZ89251.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F) [Thiomonas sp. 3As]
Length = 442
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/400 (51%), Positives = 270/400 (67%), Gaps = 5/400 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+G + R + + ++ +G + ++ EVK S LRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 35 LQGYLARDGYQALRKILTEGWTPEQVIAEVKASALRGRGGAGFPTGLKWSFMPRQFPGQ- 93
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R +PH ++EG IA M + Y YI GE + E
Sbjct: 94 KYLVCNSDEGEPGTFKDRDILRFNPHAVIEGMTIAAFAMGITVGYNYIHGEIFEDYDRFE 153
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A ++A AG LG N GS + F +H +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 154 EALRQARDAGYLGDNILGSNFSFQLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFP 213
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G + G+ NN GTK++ VSG V KP E
Sbjct: 214 ASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLEVGKPNNGGTKIYSVSGDVAKPGNYEV 273
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P +L++ GG+R G + L AVIPGGSS P+LP I D MDYD++ S LG
Sbjct: 274 PMGTPFAKLLEL-AGGMREGRE-LKAVIPGGSSAPVLPASIMMDCTMDYDSIAKAGSMLG 331
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIV++ + +V ++ RLSYFY+HESCGQCTPCREGTGWL+ ++ R++ G ++E++D
Sbjct: 332 SGAVIVLNDTRCMVKSLMRLSYFYQHESCGQCTPCREGTGWLYRVVHRIENGQGRMEDLD 391
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+L V+ I G TICALGDAAA PV+ ++HFRPE E I
Sbjct: 392 LLNSVSDNIAGRTICALGDAAAMPVKSFVKHFRPEFEHHI 431
>gi|419796937|ref|ZP_14322449.1| NADH oxidoreductase (quinone), F subunit [Neisseria sicca VK64]
gi|385698998|gb|EIG29323.1| NADH oxidoreductase (quinone), F subunit [Neisseria sicca VK64]
Length = 431
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 258/379 (68%), Gaps = 4/379 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 VIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E A +A AAG LGKN GS ++F++
Sbjct: 107 HALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALDQARAAGFLGKNILGSDFEFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASVPFIV 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G N GTKLFC+SGHV +P E + P E++ + GG+RGG L
Sbjct: 227 RDGGQTFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEIL-KMAGGMRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYY 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L V Q+ G TICAL DAA +PV
Sbjct: 345 DESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHA 477
+ +HFR E I EH
Sbjct: 405 RSFTKHFRDEFVHYI-EHG 422
>gi|241760593|ref|ZP_04758685.1| NADH oxidoreductase, f subunit [Neisseria flavescens SK114]
gi|261379575|ref|ZP_05984148.1| NADH oxidoreductase, F subunit [Neisseria subflava NJ9703]
gi|241318774|gb|EER55300.1| NADH oxidoreductase, f subunit [Neisseria flavescens SK114]
gi|284798049|gb|EFC53396.1| NADH oxidoreductase, F subunit [Neisseria subflava NJ9703]
Length = 431
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|225077023|ref|ZP_03720222.1| hypothetical protein NEIFLAOT_02075 [Neisseria flavescens
NRL30031/H210]
gi|224951580|gb|EEG32789.1| hypothetical protein NEIFLAOT_02075 [Neisseria flavescens
NRL30031/H210]
Length = 431
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQVFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|332526752|ref|ZP_08402854.1| NADH dehydrogenase (quinone) [Rubrivivax benzoatilyticus JA2]
gi|332111155|gb|EGJ11187.1| NADH dehydrogenase (quinone) [Rubrivivax benzoatilyticus JA2]
Length = 448
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/379 (54%), Positives = 256/379 (67%), Gaps = 4/379 (1%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ EVK S LRGRGGAGFP+GLKWSFMP+ G P YLV N+DE EPGTCKDR+I+ +
Sbjct: 65 DQVIAEVKLSALRGRGGAGFPTGLKWSFMPRQFPG-PKYLVCNSDEGEPGTCKDRDILSY 123
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG IA M Y YI GE + E A EA AAG LG N GS + F
Sbjct: 124 NPHIVIEGMCIAAYAMGIRTGYNYIHGEIFEVYQRFEEALDEARAAGFLGDNILGSQHSF 183
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 184 QLHAFHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 243
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ G + G+ NN GTK+F V G V +P E M P L++ GGV+GG
Sbjct: 244 IINHGGQAYLEVGKPNNGGTKIFSVVGDVERPGNFEIPMGTPFATLLEM-AGGVKGG--A 300
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP + D+ MDYDA+ S LG+ AVIVM+ +V ++ RLSYF
Sbjct: 301 LKAVIPGGSSAPVLPARVMMDLTMDYDAIAKAGSMLGSGAVIVMNDKRCMVRSLMRLSYF 360
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y+HESCGQCTPCREGTGWLW ++ER++ G + E++ +L V I+G TICALGDAAA
Sbjct: 361 YQHESCGQCTPCREGTGWLWRLVERIETGKGRAEDLALLDSVADNIKGRTICALGDAAAM 420
Query: 457 PVQGLIRHFRPELERRIKE 475
PVQG+++HFR E ++
Sbjct: 421 PVQGMLKHFRDEFAWHVEH 439
>gi|56707216|ref|YP_169112.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669686|ref|YP_666243.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis FSC198]
gi|187930993|ref|YP_001890977.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254371432|ref|ZP_04987433.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
FSC033]
gi|254874054|ref|ZP_05246764.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
MA00-2987]
gi|379716417|ref|YP_005304753.1| NADH-ubiquinone oxidoreductase subunit F [Francisella tularensis
subsp. tularensis TIGB03]
gi|379725100|ref|YP_005317286.1| NADH-ubiquinone oxidoreductase subunit F [Francisella tularensis
subsp. tularensis TI0902]
gi|385793789|ref|YP_005830195.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis NE061598]
gi|421754643|ref|ZP_16191610.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 80700075]
gi|56603708|emb|CAG44669.1| NADH dehydrogenase I, F subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320019|emb|CAL08052.1| NADH dehydrogenase I, F subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|151569671|gb|EDN35325.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
FSC033]
gi|187711902|gb|ACD30199.1| NADH dehydrogenase I, F subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840053|gb|EET18489.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158324|gb|ADA77715.1| NADH dehydrogenase I, F subunit [Francisella tularensis subsp.
tularensis NE061598]
gi|377826549|gb|AFB79797.1| NADH-ubiquinone oxidoreductase chain F [Francisella tularensis
subsp. tularensis TI0902]
gi|377828094|gb|AFB78173.1| NADH-ubiquinone oxidoreductase chain F [Francisella tularensis
subsp. tularensis TIGB03]
gi|409090685|gb|EKM90697.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
tularensis 80700075]
Length = 424
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGIAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 220 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGVRNG-NK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCIVRTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 398 PVQSYIDKFRHEFVYMIENN 417
>gi|300703647|ref|YP_003745249.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum
CFBP2957]
gi|299071310|emb|CBJ42628.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum
CFBP2957]
Length = 431
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/405 (51%), Positives = 279/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKISPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I G M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGGYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A +EA AAG LG N G+G++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 QALEEARAAGFLGDNILGTGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GPD + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAIGPDNYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+R G L AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFSKLLEL-AGGMRDG-KKLKAVIPGGSSAPVVPADLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRVVDRIEHGKGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV-EHKQ 424
>gi|326316104|ref|YP_004233776.1| NADH-quinone oxidoreductase subunit F [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372940|gb|ADX45209.1| NADH-quinone oxidoreductase, F subunit [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 452
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 264/379 (69%), Gaps = 3/379 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I++
Sbjct: 67 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRSFPGQ-KYLVCNSDEGEPGTCKDRDILQF 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG N GS + F
Sbjct: 126 NPHIVIEGMIIAAFAMGISVGYNYIHGEIFQTYERFEEALEEARAAGYLGDNILGSSFSF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 186 QLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + + G+ NN GTK+F VSG V KP E + P +L++ GGVR G
Sbjct: 246 IIRNGGAAYLACGKPNNGGTKIFSVSGDVEKPGNYEVPLGTPFAKLLEL-AGGVRKG-RQ 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD S +V+++ RLSYF
Sbjct: 304 LKAVIPGGSSAPVLPASIIMECTMDYDSIAKAGSMLGSGAVIVMDDSRSMVESLLRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGW+W +++R++ G + ++D+L V I+G TICALGDAAA
Sbjct: 364 YSHESCGQCTPCREGTGWMWRVIDRIQHGQGREGDLDLLNSVADNIQGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPELERRIKE 475
PV+ +I+HFRPE E I+
Sbjct: 424 PVRAMIKHFRPEFEALIRN 442
>gi|387825325|ref|YP_005824796.1| NADH-ubiquinone oxidoreductase subunit F [Francisella cf. novicida
3523]
gi|332184791|gb|AEE27045.1| NADH-ubiquinone oxidoreductase chain F [Francisella cf. novicida
3523]
Length = 424
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/380 (55%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGG+R G +
Sbjct: 220 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGIRNG-NK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCIVRTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 398 PVQSYIDKFRDEFIYMIENN 417
>gi|238023164|ref|ZP_04603590.1| hypothetical protein GCWU000324_03090 [Kingella oralis ATCC 51147]
gi|237865547|gb|EEP66687.1| hypothetical protein GCWU000324_03090 [Kingella oralis ATCC 51147]
Length = 431
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/401 (52%), Positives = 267/401 (66%), Gaps = 6/401 (1%)
Query: 80 MKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + D I+NE+K S LRGRGGAGFP+GLKWSFMP+ +G+ Y+V
Sbjct: 27 IKRGGYQALRKIISEKTPQDDIINELKTSNLRGRGGAGFPTGLKWSFMPRAFEGQ-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +I G M ASA Y YI GE + E A
Sbjct: 86 CNTDEGEPGTFKDRDIILFNPHALIEGMIIGGYTMGASAGYNYIHGEIFEGYQRFEAALA 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A A LLG+N GS + F++ H+G GAY+CGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QAREANLLGQNILGSDFSFELFAHHGYGAYVCGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P ILR G FA G + GTKLF +SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFILRDGGQTFADIGIEKAGGTKLFSISGHVERPGNYEIPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P EL+ GGVRGG L AVIPGGSS P+LP I + MDYD++ S LG+ AV
Sbjct: 266 PFAELL-AMAGGVRGG-KKLKAVIPGGSSAPVLPADIIMQINMDYDSIAKAGSMLGSGAV 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYHEESCGQCTPCREGTGWLYRIVHRIANGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
V + G TICAL DAA +PV+G +HFR E I EH +
Sbjct: 384 VGNNMAGRTICALADAAVFPVRGFTKHFREEFVHYI-EHGK 423
>gi|421862674|ref|ZP_16294379.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379798|emb|CBX21574.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 431
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSIPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|194324420|ref|ZP_03058193.1| NADH-quinone oxidoreductase, f subunit [Francisella novicida FTE]
gi|194321485|gb|EDX18970.1| NADH-quinone oxidoreductase, f subunit [Francisella tularensis
subsp. novicida FTE]
Length = 391
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 8 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 66
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 67 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 126
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 127 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 186
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 187 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQKVVEIGLGMPFKELLD-MCGGVRNG-NK 244
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 245 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCMVRTLARLADF 304
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 305 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 364
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 365 PVQSYIDKFRHEFVYMIENN 384
>gi|407938236|ref|YP_006853877.1| NADH-quinone oxidoreductase subunit F [Acidovorax sp. KKS102]
gi|407896030|gb|AFU45239.1| NADH-quinone oxidoreductase subunit F [Acidovorax sp. KKS102]
Length = 451
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/381 (54%), Positives = 264/381 (69%), Gaps = 3/381 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I++
Sbjct: 67 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRSFPGQ-KYLVCNSDEGEPGTCKDRDILQF 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG N GS + F
Sbjct: 126 NPHIVIEGMIIAAYAMGISVGYNYIHGEIFQTYERFEAALEEARAAGYLGDNILGSSFSF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 186 QLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG V KP E + P +L++ GGVR G
Sbjct: 246 IIRNGGAAYLECGKPNNGGTKIFSVSGDVEKPGNYEVPLGTPFAKLLEL-AGGVRKG-RQ 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD S +V+++ RLSYF
Sbjct: 304 LKAVIPGGSSAPVLPASIIMECTMDYDSIAKAGSMLGSGAVIVMDDSRSMVESLLRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGW+W +++R++ G + ++D+L V I+G TICALGDAAA
Sbjct: 364 YSHESCGQCTPCREGTGWMWRVIDRIQHGQGREGDLDLLNSVADNIQGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPELERRIKEHA 477
PV+ +I+HFRPE E I+ A
Sbjct: 424 PVRAMIKHFRPEFEALIRNKA 444
>gi|152980581|ref|YP_001353157.1| NADH dehydrogenase I subunit F [Janthinobacterium sp. Marseille]
gi|151280658|gb|ABR89068.1| NADH dehydrogenase I chain F [Janthinobacterium sp. Marseille]
Length = 431
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/401 (52%), Positives = 270/401 (67%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + K ++ +G + ++ EVK S LRGRGGAGFPSGLKWSFMPK G+
Sbjct: 24 LEEYVKRGGYASLKRILSEGMTPEQVIAEVKASTLRGRGGAGFPSGLKWSFMPKNFAGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R++PH ++EG IA M S Y YI GE E E
Sbjct: 83 KYLVCNSDEGEPGTFKDRDILRYNPHSVIEGMTIAAYAMGVSVGYNYIHGEIFAEYDRFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A ++A AAG LG N GS + F +H +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEQARAAGFLGDNILGSTHSFQLHAFHGFGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I + G + +A+ G+ NN GTK+F VSG V P E
Sbjct: 203 ASYGLYGKPTTINNTETFAAVPFIFQVGAEAYAAIGKPNNGGTKIFSVSGDVENPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P EL+ + GGVRGG L AVIPGGSSVP++ + MDYD++ S LG
Sbjct: 263 PLGTPFAELL-KLAGGVRGG-KKLKAVIPGGSSVPVVKGDLMMATDMDYDSVAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V A+ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKALLRLSYFYYEESCGQCTPCREGTGWLYRMVHRIENGQGRPEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
ML V I+G TICALGDAAA PV+ +I+ FR E I+
Sbjct: 381 MLNSVADNIQGRTICALGDAAAMPVRAMIQQFREEFVYHIE 421
>gi|30249732|ref|NP_841802.1| respiratory-chain NADH dehydrogenase 51 Kd subunit [Nitrosomonas
europaea ATCC 19718]
gi|30180769|emb|CAD85683.1| Respiratory-chain NADH dehydrogenase 51 Kd subunit [Nitrosomonas
europaea ATCC 19718]
Length = 425
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/403 (53%), Positives = 277/403 (68%), Gaps = 6/403 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
LK +KR + K ++ + + +++EVKKS LRGRGGAGFP+GLKWSFMPK G
Sbjct: 22 LKNYLKRDGYAALKKILSQKISPEAVIDEVKKSALRGRGGAGFPTGLKWSFMPKQYTGE- 80
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+IMR++PH L+EG LIA M Y Y+ GE + + +E
Sbjct: 81 KYLVCNSDEGEPGTFKDRDIMRYNPHILIEGMLIAAYAMGIRTGYNYVHGEIWDVYERME 140
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AG LG N GSG+ F ++ H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 141 EAVEEANVAGFLGDNILGSGFSFRLYNHHGYGAYICGEETALLESIEGKKGQPRFKPPFP 200
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
AN GLYG PTT+ N ET A P I+R G + + G+ NN GTK+F VSGHVNKP E
Sbjct: 201 ANFGLYGKPTTINNTETFASVPWIIRNGGERYLQLGKPNNGGTKIFSVSGHVNKPGNYEV 260
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P +L++ GG+RGG L IPGGSS+P+LP I + MDYD++ S LG
Sbjct: 261 PMGTPFAKLLEL-AGGMRGG-RKLKGCIPGGSSMPVLPGDIMMETDMDYDSIAKAGSMLG 318
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVI+MD +T +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R++ G ++E++D
Sbjct: 319 SGAVIIMDDTTCMVRALERLSYFYYEESCGQCTPCREGTGWLYRIINRIEHGKGRVEDLD 378
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
+L + I+G TICALGDAAA PV+ +++HFR E I EH
Sbjct: 379 LLDNLADNIQGRTICALGDAAAMPVRAMLQHFRDEFVFHI-EH 420
>gi|118498236|ref|YP_899286.1| NADH dehydrogenase I subunit F [Francisella novicida U112]
gi|118424142|gb|ABK90532.1| NADH dehydrogenase I, F subunit [Francisella novicida U112]
Length = 424
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 220 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQKVVEIGLGMPFKELLD-MCGGVRNG-NK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCMVRTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 398 PVQSYIDKFRHEFVYMIENN 417
>gi|261378535|ref|ZP_05983108.1| NADH oxidoreductase, F subunit [Neisseria cinerea ATCC 14685]
gi|269145085|gb|EEZ71503.1| NADH oxidoreductase, F subunit [Neisseria cinerea ATCC 14685]
Length = 431
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+ Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 IGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|208780263|ref|ZP_03247605.1| NADH-quinone oxidoreductase, f subunit [Francisella novicida FTG]
gi|385793647|ref|YP_005826623.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|208743912|gb|EDZ90214.1| NADH-quinone oxidoreductase, f subunit [Francisella novicida FTG]
gi|332678972|gb|AEE88101.1| NADH-ubiquinone oxidoreductase chain F [Francisella cf. novicida
Fx1]
Length = 391
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 8 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 66
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 67 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 126
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 127 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 186
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 187 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGVRNG-NK 244
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 245 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCMVRTLARLADF 304
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 305 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 364
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 365 PVQSYIDKFRHEFVYMIENN 384
>gi|421541585|ref|ZP_15987702.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM255]
gi|254674109|emb|CBA09893.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Neisseria
meningitidis alpha275]
gi|402319954|gb|EJU55458.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM255]
Length = 433
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 268/400 (67%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIVRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEIL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIIMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+ Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 IGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|383757417|ref|YP_005436402.1| NADH-quinone oxidoreductase, F subunit NuoF [Rubrivivax gelatinosus
IL144]
gi|381378086|dbj|BAL94903.1| NADH-quinone oxidoreductase, F subunit NuoF [Rubrivivax gelatinosus
IL144]
Length = 448
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/373 (54%), Positives = 254/373 (68%), Gaps = 4/373 (1%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ EVK S LRGRGGAGFP+GLKWSFMP+ G P YLV N+DE EPGTCKDR+I+
Sbjct: 65 DQVIAEVKLSALRGRGGAGFPTGLKWSFMPRQFPG-PKYLVCNSDEGEPGTCKDRDILSF 123
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG IA M Y YI GE + E A EA AAG LG N GS + F
Sbjct: 124 NPHIVIEGMCIAAYAMGIRTGYNYIHGEIFEVYQRFEEALDEARAAGFLGDNILGSQHSF 183
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 184 QLHAFHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 243
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ G + G+ NN GTK+F V G V +P E M P L++ GGV+GG
Sbjct: 244 IINHGGQAYLEVGKPNNGGTKIFSVVGDVERPGNFEIPMGTPFSTLLEM-AGGVKGG--A 300
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP + D+ MDYDA+ S LG+ AVIVM+ + +V ++ RLSYF
Sbjct: 301 LKAVIPGGSSAPVLPAKVMMDLTMDYDAIAKAGSMLGSGAVIVMNDTRCMVKSLLRLSYF 360
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y+HESCGQCTPCREGTGWLW ++ER++ G + E++ +L V I+G TICALGDAAA
Sbjct: 361 YQHESCGQCTPCREGTGWLWRLVERIETGKGRAEDLALLDSVADNIKGRTICALGDAAAM 420
Query: 457 PVQGLIRHFRPEL 469
PVQG+++HFR E
Sbjct: 421 PVQGMLKHFRDEF 433
>gi|418530545|ref|ZP_13096468.1| NADH-quinone oxidoreductase, F subunit [Comamonas testosteroni ATCC
11996]
gi|371452264|gb|EHN65293.1| NADH-quinone oxidoreductase, F subunit [Comamonas testosteroni ATCC
11996]
Length = 454
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 282/423 (66%), Gaps = 10/423 (2%)
Query: 63 RIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA------DWIVNEVKKSGLRGRGGAGF 116
+I+ +L G + +K RG + + L+ K D ++ +K+SGLRGRGGAGF
Sbjct: 34 QIYADLNG-SNWSIKDYEARGGYQALRKLLGKDGSEGLTQDQVIATLKESGLRGRGGAGF 92
Query: 117 PSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
P+GLKWSFMP+ G+ +LV N+DE EPGTCKDR+I+ +PH ++EG +IA M S
Sbjct: 93 PTGLKWSFMPRQFPGQ-KHLVCNSDEGEPGTCKDRDILMFNPHIVIEGMIIAAFAMGISI 151
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
Y YI GE + E A +EA AAG LG N GS + F +H H+G GAYICGEETALL
Sbjct: 152 GYNYIHGEIFEVYERFEAALEEARAAGYLGDNILGSSFSFQLHAHHGFGAYICGEETALL 211
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G + G+ NN GT
Sbjct: 212 ESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLECGKPNNGGT 271
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+F VSG VN P E M P +L++ GGVR G L AVIPGGSS P+LP I
Sbjct: 272 KIFSVSGDVNLPGNYEVPMGTPFSKLLEL-AGGVRTG-RKLKAVIPGGSSSPVLPADIIM 329
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MDYD++ S LG+ AVIVMD S D+V+ + RLSYFY HESCGQCTPCREGTGWLW
Sbjct: 330 DCTMDYDSISKAGSMLGSGAVIVMDDSRDMVECLLRLSYFYSHESCGQCTPCREGTGWLW 389
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R++ G + E+I++L V+ I G TICALGDAAA PV+ +I+HFR E E +I+
Sbjct: 390 RVVNRIQHGEGRPEDIELLDSVSVNIMGRTICALGDAAAMPVRAMIKHFRHEFEAKIQNA 449
Query: 477 AER 479
+++
Sbjct: 450 SKQ 452
>gi|325983284|ref|YP_004295686.1| NADH-quinone oxidoreductase subunit F [Nitrosomonas sp. AL212]
gi|325532803|gb|ADZ27524.1| NADH-quinone oxidoreductase, F subunit [Nitrosomonas sp. AL212]
Length = 425
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/401 (51%), Positives = 273/401 (68%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ KR + K +++K + ++ EVKKS LRGRGGAGFP+GLKWSFMPK +G
Sbjct: 22 LRSYEKREGYAALKKILIKKIAPEEVIEEVKKSALRGRGGAGFPTGLKWSFMPKGYEG-D 80
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
Y+V N+DE EPGT KDR+I+R++PH L+EG +IA M A Y YI GE + +E
Sbjct: 81 KYIVCNSDEGEPGTFKDRDILRYNPHILIEGMIIAAYAMGVKAGYNYIHGEIWETYERME 140
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA +AG LG N GS + F ++ H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 141 DAVEEARSAGYLGNNILGSTFSFQLYNHHGYGAYICGEETALLESIEGKKGQPRFKPPFP 200
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
AN GLYG PTT+ N ET A P I+R + + G+ NN GTK+F VSGHVNKP E
Sbjct: 201 ANYGLYGKPTTINNTETFASVPWIIRNSGEKYLQLGKPNNGGTKIFSVSGHVNKPGNYEI 260
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ +L++ GG+RGG L IPGGSS+P+LP I MDYD++ S LG
Sbjct: 261 PLGTSFAKLLEL-AGGMRGG-RKLKGCIPGGSSMPVLPGDIMMQTDMDYDSIAKAGSMLG 318
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVI+MD++T +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R++ G + E++D
Sbjct: 319 SGAVIIMDETTCMVRALERLSYFYYEESCGQCTPCREGTGWLYRIVNRIEHGKGRSEDLD 378
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L + I+G TICALGDAAA PV+ +++HFR E I+
Sbjct: 379 LLDNIADNIQGRTICALGDAAAMPVRAMLQHFRDEFAYHIE 419
>gi|254805712|ref|YP_003083933.1| NADH dehydrogenase I subunit F [Neisseria meningitidis alpha14]
gi|254669254|emb|CBA08142.1| NADH dehydrogenase I chain F [Neisseria meningitidis alpha14]
Length = 433
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/379 (54%), Positives = 259/379 (68%), Gaps = 4/379 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 VIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E A ++A AAG LGKN GS ++F++
Sbjct: 107 HALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGSDFEFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET + P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFSSVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G N GTKLFC+SGHV +P E + P E++ + GG+RGG L
Sbjct: 227 RDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVL-KMVGGMRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYY 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L V Q+ G TICAL DAA +PV
Sbjct: 345 DESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHA 477
+ +HFR E I EH
Sbjct: 405 RSFTKHFRDEFVHYI-EHG 422
>gi|385854422|ref|YP_005900935.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M01-240355]
gi|325203363|gb|ADY98816.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M01-240355]
Length = 433
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F + H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFKLFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|264677203|ref|YP_003277109.1| NADH-quinone oxidoreductase subunit F [Comamonas testosteroni
CNB-2]
gi|299530747|ref|ZP_07044162.1| NADH-quinone oxidoreductase, F subunit [Comamonas testosteroni S44]
gi|262207715|gb|ACY31813.1| NADH-quinone oxidoreductase, F subunit [Comamonas testosteroni
CNB-2]
gi|298721263|gb|EFI62205.1| NADH-quinone oxidoreductase, F subunit [Comamonas testosteroni S44]
Length = 454
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 282/423 (66%), Gaps = 10/423 (2%)
Query: 63 RIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA------DWIVNEVKKSGLRGRGGAGF 116
+I+ +L G + +K RG + + L+ K D ++ +K+SGLRGRGGAGF
Sbjct: 34 QIYADLNG-SNWSIKDYEARGGYQALRKLLGKDGGEGLTQDQVIATLKESGLRGRGGAGF 92
Query: 117 PSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
P+GLKWSFMP+ G+ +LV N+DE EPGTCKDR+I+ +PH ++EG +IA M S
Sbjct: 93 PTGLKWSFMPRQFPGQ-KHLVCNSDEGEPGTCKDRDILMFNPHIVIEGMIIAAFAMGISI 151
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
Y YI GE + E A +EA AAG LG N GS + F +H H+G GAYICGEETALL
Sbjct: 152 GYNYIHGEIFEVYERFEAALEEARAAGYLGDNILGSSFSFQLHAHHGFGAYICGEETALL 211
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G + G+ NN GT
Sbjct: 212 ESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLECGKPNNGGT 271
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+F VSG VN P E M P +L++ GGVR G L AVIPGGSS P+LP I
Sbjct: 272 KIFSVSGDVNLPGNYEVPMGTPFSKLLEL-AGGVRTG-RKLKAVIPGGSSSPVLPADIIM 329
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MDYD++ S LG+ AVIVMD S D+V+ + RLSYFY HESCGQCTPCREGTGWLW
Sbjct: 330 DCTMDYDSISKAGSMLGSGAVIVMDDSRDMVECLLRLSYFYSHESCGQCTPCREGTGWLW 389
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R++ G + E+I++L V+ I G TICALGDAAA PV+ +I+HFR E E +I+
Sbjct: 390 RVVNRIQHGEGRPEDIELLDSVSVNIMGRTICALGDAAAMPVRAMIKHFRHEFEAKIQNA 449
Query: 477 AER 479
+++
Sbjct: 450 SKQ 452
>gi|62261001|gb|AAX77952.1| unknown protein [synthetic construct]
Length = 459
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/378 (55%), Positives = 260/378 (68%), Gaps = 3/378 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R++P
Sbjct: 69 IIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRNNP 127
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG FD+
Sbjct: 128 HQLIEGIAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISFDL 187
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P IL
Sbjct: 188 YSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPAIL 247
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G + L
Sbjct: 248 QYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGVRNG-NKLK 305
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ FY
Sbjct: 306 AVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCIVRTLARLADFYY 365
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAWPV
Sbjct: 366 EESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAWPV 425
Query: 459 QGLIRHFRPELERRIKEH 476
Q I FR E I+ +
Sbjct: 426 QSYIDKFRHEFVYMIENN 443
>gi|254368970|ref|ZP_04984983.1| NADH dehydrogenase [Francisella tularensis subsp. holarctica
FSC022]
gi|157121891|gb|EDO66061.1| NADH dehydrogenase [Francisella tularensis subsp. holarctica
FSC022]
Length = 424
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGIAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 220 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGVRNG-NK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCMVRTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 398 PVQSYIDKFRHEFVYMIENN 417
>gi|254375044|ref|ZP_04990524.1| NADH dehydrogenase I subunit F [Francisella novicida GA99-3548]
gi|151572762|gb|EDN38416.1| NADH dehydrogenase I subunit F [Francisella novicida GA99-3548]
Length = 424
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 220 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGVRNG-NK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETTCMVRTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 398 PVQSYIDKFRHEFVYMIENN 417
>gi|218767064|ref|YP_002341576.1| NADH dehydrogenase I subunit F [Neisseria meningitidis Z2491]
gi|385338857|ref|YP_005892730.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F;
NDH-1, chain F) [Neisseria meningitidis WUE 2594]
gi|433474724|ref|ZP_20432072.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
88050]
gi|433478976|ref|ZP_20436275.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
63041]
gi|433512608|ref|ZP_20469410.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
63049]
gi|433514714|ref|ZP_20471490.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2004090]
gi|433516835|ref|ZP_20473588.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
96023]
gi|433519025|ref|ZP_20475751.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
65014]
gi|433523168|ref|ZP_20479840.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
97020]
gi|433527414|ref|ZP_20484027.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM3652]
gi|433529507|ref|ZP_20486106.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM3642]
gi|433531625|ref|ZP_20488194.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2007056]
gi|433533700|ref|ZP_20490249.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2001212]
gi|433535902|ref|ZP_20492421.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
77221]
gi|433540180|ref|ZP_20496637.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
63006]
gi|121051072|emb|CAM07342.1| NADH dehydrogenase I chain F [Neisseria meningitidis Z2491]
gi|319411271|emb|CBY91678.1| NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F;
NDH-1, chain F) [Neisseria meningitidis WUE 2594]
gi|432212784|gb|ELK68719.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
88050]
gi|432218950|gb|ELK74802.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
63041]
gi|432250363|gb|ELL05758.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
63049]
gi|432256049|gb|ELL11374.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
96023]
gi|432256378|gb|ELL11701.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2004090]
gi|432256766|gb|ELL12080.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
65014]
gi|432262624|gb|ELL17860.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
97020]
gi|432267483|gb|ELL22661.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM3652]
gi|432269645|gb|ELL24802.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2007056]
gi|432269758|gb|ELL24911.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM3642]
gi|432274253|gb|ELL29346.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
2001212]
gi|432276323|gb|ELL31381.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
77221]
gi|432278161|gb|ELL33205.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
63006]
Length = 433
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/379 (54%), Positives = 259/379 (68%), Gaps = 4/379 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 VIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E A ++A AAG LGKN GS ++F++
Sbjct: 107 HALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGSDFEFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET + P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFSSVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G N GTKLFC+SGHV +P E + P E++ + GG+RGG L
Sbjct: 227 RDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVL-KMAGGMRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYY 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L + Q+ G TICAL DAA +PV
Sbjct: 345 DESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSIGNQMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHA 477
+ +HFR E I EH
Sbjct: 405 RSFTKHFRDEFVHYI-EHG 422
>gi|421549805|ref|ZP_15995815.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
69166]
gi|433470545|ref|ZP_20427945.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
68094]
gi|433476824|ref|ZP_20434152.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
70012]
gi|433521034|ref|ZP_20477735.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
61103]
gi|433525310|ref|ZP_20481956.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
69096]
gi|433538008|ref|ZP_20494495.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
70030]
gi|402331756|gb|EJU67088.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
69166]
gi|432211978|gb|ELK67922.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
68094]
gi|432217977|gb|ELK73842.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
70012]
gi|432262500|gb|ELL17738.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
61103]
gi|432263458|gb|ELL18678.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
69096]
gi|432276148|gb|ELL31210.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
70030]
Length = 433
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS +F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDLEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIVRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|221068607|ref|ZP_03544712.1| NADH-quinone oxidoreductase, F subunit [Comamonas testosteroni
KF-1]
gi|220713630|gb|EED68998.1| NADH-quinone oxidoreductase, F subunit [Comamonas testosteroni
KF-1]
Length = 454
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 281/423 (66%), Gaps = 10/423 (2%)
Query: 63 RIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA------DWIVNEVKKSGLRGRGGAGF 116
+I+ +L G + +K RG + + L+ K D ++ +K+SGLRGRGGAGF
Sbjct: 34 QIYADLNG-SNWSIKDYEARGGYQALRKLLGKDGGEGLTQDQVIATLKESGLRGRGGAGF 92
Query: 117 PSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
P+GLKWSFMP+ G+ +LV N+DE EPGTCKDR+I+ +PH ++EG +IA M S
Sbjct: 93 PTGLKWSFMPRQFPGQ-KHLVCNSDEGEPGTCKDRDILMFNPHIVIEGMIIAAFAMGISI 151
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
Y YI GE E A +EA AAG LG N GS + F +H H+G GAYICGEETALL
Sbjct: 152 GYNYIHGEIFEVYDRFEAALEEARAAGYLGDNILGSSFSFQLHAHHGFGAYICGEETALL 211
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G + G+ NN GT
Sbjct: 212 ESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLECGKPNNGGT 271
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+F VSG VN P E M P +L++ GGVR G L AVIPGGSS P+LP I
Sbjct: 272 KIFSVSGDVNLPGNYEVPMGTPFSKLLEL-AGGVRTG-RKLKAVIPGGSSSPVLPADIIM 329
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MDYD++ S LG+ AVIVMD S D+V+ + RLSYFY HESCGQCTPCREGTGWLW
Sbjct: 330 DCTMDYDSISKAGSMLGSGAVIVMDDSRDMVECLLRLSYFYSHESCGQCTPCREGTGWLW 389
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
++ R++ G + E+I++L V+ I G TICALGDAAA PV+ +I+HFR E E +I+
Sbjct: 390 RVVNRIQHGEGRPEDIELLDSVSVNIMGRTICALGDAAAMPVRAMIKHFRHEFEAKIQNA 449
Query: 477 AER 479
+++
Sbjct: 450 SKQ 452
>gi|387886228|ref|YP_006316527.1| NADH dehydrogenase (quinone) [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871044|gb|AFJ43051.1| NADH dehydrogenase (quinone) [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 424
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 259/378 (68%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREIMR+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNTPGQ-KYVVCNSDEGEPGTCKDREIMRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG +IAG + A+A Y Y RGE+ E A EAY GLLG N SG F
Sbjct: 100 NPHQLIEGMVIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQTGLLGSNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLYG PT + N ET A +P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYGRPTNINNTETYASAPV 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G WF + G + + GTKLFC+SGHV +E + P K++++ CGGVR G
Sbjct: 220 ILQHGGQWFKNLGTEKSGGTKLFCISGHVKHQKVMEIGLGTPFKDVLEM-CGGVRNG-HK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTGEEMLKVTMDYESIAEAGSMLGSGAVVVLDETTCMVKTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G KLE+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGKLEDIDTLVRVVTNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIK 474
PVQ I FR E I+
Sbjct: 398 PVQSYINKFREEFVYMIE 415
>gi|77166018|ref|YP_344543.1| NADH-quinone oxidoreductase subunit F [Nitrosococcus oceani ATCC
19707]
gi|254436308|ref|ZP_05049814.1| NADH oxidoreductase (quinone), F subunit [Nitrosococcus oceani
AFC27]
gi|76884332|gb|ABA59013.1| NADH dehydrogenase subunit F [Nitrosococcus oceani ATCC 19707]
gi|207087998|gb|EDZ65271.1| NADH oxidoreductase (quinone), F subunit [Nitrosococcus oceani
AFC27]
Length = 427
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/375 (56%), Positives = 265/375 (70%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++E+K SGLRGRGGAGFP+GLKWSFMPK G Y+V N+DE EPGT KDR+I+R++P
Sbjct: 45 IIDEIKASGLRGRGGAGFPTGLKWSFMPKDLAGI-KYIVCNSDEGEPGTFKDRDILRYNP 103
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG IAG + A+ Y Y RGE+ + E A +EAY AGLLGKN SG DFD+
Sbjct: 104 HQLIEGMAIAGYAIGAAVGYNYTRGEFSEPIERFEAALEEAYQAGLLGKNILASGVDFDL 163
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H GAGAYICGEETALLESLEGK+G PR KPPFPA GLYG PTT+ N ET+A P IL
Sbjct: 164 YSHPGAGAYICGEETALLESLEGKKGMPRYKPPFPAGFGLYGRPTTINNTETLASVPVIL 223
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WF G + GTK+F VSGHVN+P E M I K+L++ GG+R G + L
Sbjct: 224 EKGGQWFLKLGTPTSGGTKIFSVSGHVNRPGNYEVPMGISFKDLLEL-AGGMRNG-NALK 281
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGG+SVP++P MDYD+L S LG +VI+MD++T +V A+ R+S FY+
Sbjct: 282 AVIPGGTSVPVMPAEAIMAANMDYDSLAKAGSLLGAGSVIIMDETTCMVRALERISAFYR 341
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R++ G E++D + V + I+GHTICALGDAAA PV
Sbjct: 342 EESCGQCTPCREGTGWLYRVVHRIEQGQGTQEDLDKVVNVAENIDGHTICALGDAAAAPV 401
Query: 459 QGLIRHFRPELERRI 473
I+HFR E + I
Sbjct: 402 ISFIKHFRDEFQYHI 416
>gi|121634118|ref|YP_974363.1| NADH dehydrogenase I subunit F [Neisseria meningitidis FAM18]
gi|385339288|ref|YP_005893160.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
G2136]
gi|385342719|ref|YP_005896590.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M01-240149]
gi|385856388|ref|YP_005902900.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
NZ-05/33]
gi|416186274|ref|ZP_11613635.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M0579]
gi|416190079|ref|ZP_11615559.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
ES14902]
gi|416200264|ref|ZP_11619579.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
961-5945]
gi|416200339|ref|ZP_11619605.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
961-5945]
gi|421543648|ref|ZP_15989739.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM140]
gi|421545709|ref|ZP_15991769.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM183]
gi|421547776|ref|ZP_15993808.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM2781]
gi|421551988|ref|ZP_15997969.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM576]
gi|421558304|ref|ZP_16004187.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
92045]
gi|433466362|ref|ZP_20423825.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
87255]
gi|433468480|ref|ZP_20425917.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
98080]
gi|433491735|ref|ZP_20448837.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM586]
gi|433493842|ref|ZP_20450918.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM762]
gi|433495958|ref|ZP_20453007.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
M7089]
gi|433498125|ref|ZP_20455141.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
M7124]
gi|433502145|ref|ZP_20459116.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM126]
gi|120865824|emb|CAM09556.1| NADH dehydrogenase I chain F [Neisseria meningitidis FAM18]
gi|325137073|gb|EGC59669.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M0579]
gi|325139137|gb|EGC61683.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
ES14902]
gi|325143087|gb|EGC65434.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
961-5945]
gi|325143157|gb|EGC65503.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
961-5945]
gi|325197532|gb|ADY92988.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
G2136]
gi|325202925|gb|ADY98379.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M01-240149]
gi|325207277|gb|ADZ02729.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
NZ-05/33]
gi|402325937|gb|EJU61344.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM183]
gi|402326490|gb|EJU61892.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM140]
gi|402327796|gb|EJU63183.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM2781]
gi|402332904|gb|EJU68222.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM576]
gi|402338486|gb|EJU73719.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
92045]
gi|432205150|gb|ELK61181.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
87255]
gi|432206566|gb|ELK62573.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
98080]
gi|432230755|gb|ELK86427.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM586]
gi|432232020|gb|ELK87675.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM762]
gi|432236892|gb|ELK92496.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
M7124]
gi|432237600|gb|ELK93193.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
M7089]
gi|432243357|gb|ELK98869.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM126]
Length = 433
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|120609955|ref|YP_969633.1| NADH-quinone oxidoreductase subunit F [Acidovorax citrulli AAC00-1]
gi|120588419|gb|ABM31859.1| NADH dehydrogenase subunit F [Acidovorax citrulli AAC00-1]
Length = 452
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 264/379 (69%), Gaps = 3/379 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I++
Sbjct: 67 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRSFPGQ-KYLVCNSDEGEPGTCKDRDILQF 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG N GS + F
Sbjct: 126 NPHIVIEGMIIAAFAMGISVGYNYIHGEIFQTYERFEAALEEARAAGYLGDNILGSSFSF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 186 QLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + + G+ NN GTK+F VSG V KP E + P +L++ GGVR G
Sbjct: 246 IIRNGGAAYLACGKPNNGGTKIFSVSGDVEKPGNYEIPLGTPFSKLLEL-AGGVRKG-RQ 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD S +V+++ RLSYF
Sbjct: 304 LKAVIPGGSSAPVLPASIIMECTMDYDSIAKAGSMLGSGAVIVMDDSRSMVESLLRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGW+W +++R++ G + ++D+L V I+G TICALGDAAA
Sbjct: 364 YSHESCGQCTPCREGTGWMWRVIDRIQHGLGREGDLDLLNSVADNIQGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPELERRIKE 475
PV+ +I+HFRPE E I+
Sbjct: 424 PVRAMIKHFRPEFEALIRN 442
>gi|261400476|ref|ZP_05986601.1| NADH oxidoreductase, F subunit [Neisseria lactamica ATCC 23970]
gi|269209735|gb|EEZ76190.1| NADH oxidoreductase, F subunit [Neisseria lactamica ATCC 23970]
Length = 431
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS +F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDLEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|337754552|ref|YP_004647063.1| NADH-ubiquinone oxidoreductase subunit F [Francisella sp. TX077308]
gi|336446157|gb|AEI35463.1| NADH-ubiquinone oxidoreductase chain F [Francisella sp. TX077308]
Length = 424
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/378 (55%), Positives = 260/378 (68%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREIMR+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNTPGQ-KYVVCNSDEGEPGTCKDREIMRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGSNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLYG PT + N ET A +P
Sbjct: 160 DLYSAVGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYGRPTNINNTETYASAPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF S G + + GTKLFC+SGHV +E + P K++++ CGGVR G
Sbjct: 220 ILQHGGEWFKSLGTEKSGGTKLFCISGHVKHQKVMEIGLGTPFKDVLEM-CGGVRNG-HK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L +V MDY+++ S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTGEEMLNVTMDYESIAEAGSMLGSGAVVVLDETTCMVKTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G K E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGKPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIK 474
PVQ I FR E I+
Sbjct: 398 PVQSYIHKFRDEFVYMIE 415
>gi|89257085|ref|YP_514447.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
holarctica LVS]
gi|115315442|ref|YP_764165.1| NADH dehydrogenase (ubiquinone) [Francisella tularensis subsp.
holarctica OSU18]
gi|169656768|ref|YP_001429364.2| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368321|ref|ZP_04984339.1| NADH dehydrogenase I, F subunit [Francisella tularensis subsp.
holarctica 257]
gi|290952994|ref|ZP_06557615.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
holarctica URFT1]
gi|422939340|ref|YP_007012487.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
holarctica FSC200]
gi|423051469|ref|YP_007009903.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
holarctica F92]
gi|89144916|emb|CAJ80264.1| NADH dehydrogenase I, F subunit [Francisella tularensis subsp.
holarctica LVS]
gi|115130341|gb|ABI83528.1| NADH dehydrogenase (ubiquinone) [Francisella tularensis subsp.
holarctica OSU18]
gi|134254129|gb|EBA53223.1| NADH dehydrogenase I, F subunit [Francisella tularensis subsp.
holarctica 257]
gi|164551836|gb|ABU62408.2| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407294491|gb|AFT93397.1| NADH dehydrogenase I, F subunit [Francisella tularensis subsp.
holarctica FSC200]
gi|421952191|gb|AFX71440.1| NADH dehydrogenase I subunit F [Francisella tularensis subsp.
holarctica F92]
Length = 424
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGIAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 220 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGVRNG-NK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTADEMMAVNMDYESIAAAGSMLGSGAVVVLDETTCMVRTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 398 PVQSYIDKFRHEFVYMIENN 417
>gi|385327614|ref|YP_005881917.1| NADH dehydrogenase I subunit F [Neisseria meningitidis alpha710]
gi|421539442|ref|ZP_15985603.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
93004]
gi|308388466|gb|ADO30786.1| NADH dehydrogenase I chain F [Neisseria meningitidis alpha710]
gi|402321427|gb|EJU56901.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
93004]
Length = 433
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/379 (54%), Positives = 258/379 (68%), Gaps = 4/379 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 VIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E A ++A AAG LGKN GS ++F++
Sbjct: 107 HALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGSDFEFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET + I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFSSVSFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G N GTKLFC+SGHV +P E + P E++ + GG+RGG L
Sbjct: 227 RDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVL-KMAGGMRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYY 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L V Q+ G TICAL DAA +PV
Sbjct: 345 DESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHA 477
+ +HFR E I EH
Sbjct: 405 RSFTKHFRDEFVHYI-EHG 422
>gi|254468829|ref|ZP_05082235.1| NADH oxidoreductase (quinone), F subunit [beta proteobacterium
KB13]
gi|207087639|gb|EDZ64922.1| NADH oxidoreductase (quinone), F subunit [beta proteobacterium
KB13]
Length = 437
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/403 (51%), Positives = 273/403 (67%), Gaps = 9/403 (2%)
Query: 76 LKGAMKRGDWHRTKDLVLKGAD--WIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
+K G + + K ++ D +++E+K SGLRGRGGAGFP+G+KWSFMP+ DG
Sbjct: 34 IKTYQSIGGYEQIKRILKNKIDPQQLIDEIKISGLRGRGGAGFPTGVKWSFMPRDYDGT- 92
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
Y+V N+DE EPGT KDR+I+R++PH+L+EG +I M A + YI GE + E
Sbjct: 93 KYIVCNSDEGEPGTFKDRDIIRYNPHQLIEGMIIGAYIMNAQVGFNYIHGEIWEDYVFFE 152
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A ++A AG LG N GSG+DF++H +G GAYICGEETAL+ES+EGK+G+PR KPPFP
Sbjct: 153 KAIEDARKAGFLGNNILGSGFDFELHAVHGYGAYICGEETALIESIEGKKGQPRYKPPFP 212
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A G+YG PT V N ET A P I+ G F S G N+ GTK+F VSGHV KP E
Sbjct: 213 ATYGIYGKPTNVNNTETYASIPWIIEHGGQEFMSHGVPNSGGTKIFSVSGHVEKPGNYEI 272
Query: 314 EMSIPLKELIDRHCGGVRGGWDN--LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSG 371
++ +P ++L+ GGV W N L AVIPGG S P++P +I D +DYD L + S
Sbjct: 273 QLGMPFRQLL-AEAGGV---WKNRQLKAVIPGGPSTPVVPANIIIDATLDYDGLAQIGSS 328
Query: 372 LGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEE 431
+G ++IVMD ST +V A+ RLSYF+ ESCGQCTPCREGTGW++ I++R+ G A L +
Sbjct: 329 VGAGSMIVMDDSTCMVQALRRLSYFFYEESCGQCTPCREGTGWVYRIIDRIFKGQATLAD 388
Query: 432 IDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+D+L +V+K+I G TICALGDAAA PV I+HFR E E IK
Sbjct: 389 LDLLTDVSKKISGRTICALGDAAATPVLSFIKHFRSEFENFIK 431
>gi|421537285|ref|ZP_15983473.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
93003]
gi|402319762|gb|EJU55267.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
93003]
Length = 431
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|365093688|ref|ZP_09330749.1| NADH-quinone oxidoreductase subunit F [Acidovorax sp. NO-1]
gi|363414172|gb|EHL21326.1| NADH-quinone oxidoreductase subunit F [Acidovorax sp. NO-1]
Length = 451
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/381 (54%), Positives = 263/381 (69%), Gaps = 3/381 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I++
Sbjct: 67 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRSFPGQ-KYLVCNSDEGEPGTCKDRDILQF 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG N G + F
Sbjct: 126 NPHIVIEGMIIAAYAMGISVGYNYIHGEIFQTYERFEAALEEARAAGYLGDNILGGSFSF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 186 QLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG V KP E + P +L++ GGVR G
Sbjct: 246 IIRNGGAAYLECGKPNNGGTKIFSVSGDVEKPGNYEVPLGTPFAKLLEL-AGGVRKG-RQ 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD S +V+++ RLSYF
Sbjct: 304 LKAVIPGGSSAPVLPASIIMECTMDYDSIAKAGSMLGSGAVIVMDDSRSMVESLLRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGW+W +++R++ G + ++D+L V I+G TICALGDAAA
Sbjct: 364 YSHESCGQCTPCREGTGWMWRVIDRIQHGQGREGDLDLLNSVADNIQGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPELERRIKEHA 477
PV+ +I+HFRPE E I+ A
Sbjct: 424 PVRAMIKHFRPEFEALIRNKA 444
>gi|334143737|ref|YP_004536893.1| NADH-quinone oxidoreductase subunit F [Thioalkalimicrobium cyclicum
ALM1]
gi|333964648|gb|AEG31414.1| NADH-quinone oxidoreductase, F subunit [Thioalkalimicrobium
cyclicum ALM1]
Length = 427
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/375 (54%), Positives = 263/375 (70%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++EVK S LRGRGGAGFP+GLKWSFM + + G P YL+ N+DESEPGT KDR+IMR++P
Sbjct: 46 IIDEVKTSNLRGRGGAGFPTGLKWSFMNRHAPG-PKYLLCNSDESEPGTFKDRDIMRYNP 104
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG +IAG + A+A Y YIRGE+ K A ++A AAGLLG+N GSG+ FD+
Sbjct: 105 HQLIEGMMIAGYVIGANAGYNYIRGEFWEPYKRFTGAVEQARAAGLLGENILGSGHSFDL 164
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H H GAGAYICGEETAL+ES+EGK+G+PR KPPFPA+ GLYG PTT+ N ET+A P IL
Sbjct: 165 HTHLGAGAYICGEETALIESIEGKKGQPRFKPPFPASYGLYGKPTTINNTETLASIPMIL 224
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF G N GTKLF +SGH+NKP E M P K+L+ G +G L
Sbjct: 225 AKGGEWFRDIGVANAGGTKLFSMSGHINKPGNYEIPMGTPFKDLLAEAGGMWKG--RQLK 282
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS +LP + MDYD++ S LG +VI+MD TD+V A+ RL++FY
Sbjct: 283 AVIPGGSSTAVLPAENALAMTMDYDSIAKAGSFLGAGSVIIMDDHTDMVKALERLTWFYY 342
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGW++ ++ R+ G + E+I+ L++V+ +I G IC LGDAAA PV
Sbjct: 343 DESCGQCTPCREGTGWMYRMVHRIVQGKGRPEDIETLKDVSGKIMGRVICGLGDAAAIPV 402
Query: 459 QGLIRHFRPELERRI 473
++H+ E I
Sbjct: 403 ASFLKHYEHEFHHYI 417
>gi|433500034|ref|ZP_20457025.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM174]
gi|432237746|gb|ELK93337.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM174]
Length = 433
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++E+K SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEIKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|334129595|ref|ZP_08503399.1| NADH-quinone oxidoreductase subunit F [Methyloversatilis
universalis FAM5]
gi|333445280|gb|EGK73222.1| NADH-quinone oxidoreductase subunit F [Methyloversatilis
universalis FAM5]
Length = 444
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/398 (53%), Positives = 274/398 (68%), Gaps = 5/398 (1%)
Query: 80 MKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ G + I+ EVKKS LRGRGGAGFP+GLKWSFMP+ Y+V
Sbjct: 27 IKRGGYSALRKILESGMTPEQIIAEVKKSDLRGRGGAGFPTGLKWSFMPRQFP-MDKYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N+DE EPGT KDR+++R++PH ++EG IAG M + Y YI GE + + E A
Sbjct: 86 CNSDEGEPGTFKDRDLLRYNPHLVIEGMAIAGYVMGCTRGYNYIHGEIFSLYQRFEEALA 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
EA AAG +GKN G G+DFD+ H+G GAYICGEETALLES+EGK+G+PR KPPFPA+ G
Sbjct: 146 EARAAGFIGKNILGKGFDFDLFAHHGWGAYICGEETALLESIEGKKGQPRFKPPFPASHG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET A P I+ G + F + G+ NN GTK+F VSGHVN+P E +
Sbjct: 206 LYGKPTTINNTETFAAIPWIINNGGEAFQALGKPNNGGTKIFSVSGHVNRPGVYEIPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P L++ CGG+RGG L AVIPGGSS P+LP I D MDYD++ S LG+ AV
Sbjct: 266 PFSTLLEM-CGGMRGG-RKLKAVIPGGSSAPVLPGDIMMDCTMDYDSISKAGSMLGSGAV 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD++T +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + +++D L
Sbjct: 324 IVMDETTCMVKSLERLSYFYHEESCGQCTPCREGTGWLYRMVHRIEHGQGRPDDLDTLDN 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
V I G TICALGDAAA+PV+ I+HFR E E ++
Sbjct: 384 VASNIAGRTICALGDAAAFPVKSFIKHFRSEFEYHVEH 421
>gi|304389071|ref|ZP_07371115.1| NADH-quinone oxidoreductase subunit F [Neisseria meningitidis ATCC
13091]
gi|304336944|gb|EFM03134.1| NADH-quinone oxidoreductase subunit F [Neisseria meningitidis ATCC
13091]
Length = 433
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 266/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F + H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFKLFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|337280286|ref|YP_004619758.1| NADH:ubiquinone oxidoreductase subunit 1 or 51 kDa subunit, chain F
[Ramlibacter tataouinensis TTB310]
gi|334731363|gb|AEG93739.1| Candidate NADH:ubiquinone oxidoreductase subunit 1 or 51 kDa
subunit, chain F [Ramlibacter tataouinensis TTB310]
Length = 455
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/377 (55%), Positives = 262/377 (69%), Gaps = 3/377 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+S LRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I+ +
Sbjct: 62 DQVIATVKESALRGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTCKDRDILHY 120
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M + Y YI GE + E A +EA AAGLLG N GS + F
Sbjct: 121 NPHIVIEGMIIAAYAMGITVGYNYIHGEIFQTYERFEEALEEARAAGLLGSNILGSSFSF 180
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 181 QLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 240
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG V P E + P +L++ GGVRGG
Sbjct: 241 IIRNGGQAYLECGKPNNGGTKIFSVSGDVELPGNYEIPLGTPFSKLLEL-AGGVRGG-RK 298
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP D MDYD++ S LG+ AVIVMD++ D+V ++ RLSYF
Sbjct: 299 LKAVIPGGSSAPVLPASAMMDCTMDYDSIAKAGSMLGSGAVIVMDETRDMVQSLKRLSYF 358
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGWLW +++R+ G+ K ++D+L V I+G TICALGDAAA
Sbjct: 359 YMHESCGQCTPCREGTGWLWRVVDRIDNGHGKPSDMDLLNSVADNIQGRTICALGDAAAM 418
Query: 457 PVQGLIRHFRPELERRI 473
PV+ +I+HFR E E +I
Sbjct: 419 PVRAMIKHFRHEFEAKI 435
>gi|114777366|ref|ZP_01452363.1| NADH-quinone oxidoreductase, F subunit [Mariprofundus ferrooxydans
PV-1]
gi|114552148|gb|EAU54650.1| NADH-quinone oxidoreductase, F subunit [Mariprofundus ferrooxydans
PV-1]
Length = 425
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/375 (54%), Positives = 262/375 (69%), Gaps = 5/375 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
IV+E+K SGLRGRGGAGFP+GLKWSF+P+ + G+P+YL+ NADE EPGT KDR+IMR DP
Sbjct: 49 IVDEMKLSGLRGRGGAGFPTGLKWSFVPR-NTGKPTYLLCNADEGEPGTFKDRDIMRFDP 107
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG ++AG + AYIY+RGE+++E + A +EAYAA LLG+N GSGY +
Sbjct: 108 HLLIEGMIMAGFALNVRDAYIYVRGEFLHEANVMNEAIREAYAANLLGENILGSGYSMHL 167
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+H GAGAYICGEETAL+ESLEGK G+PR KPPFPA G Y CPT V NVET+A P IL
Sbjct: 168 TVHRGAGAYICGEETALIESLEGKPGRPRFKPPFPAVEGFYRCPTVVNNVETLATVPAIL 227
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
G W A+ G NN+G K+F VSGHVNKP E M LK LI+ +CGG++ G +
Sbjct: 228 EHGGAWHAAIGVPNNTGCKIFSVSGHVNKPGNYEVPMGTSLKTLIEEYCGGLQHGSVPKV 287
Query: 339 AVIPGGSSVP-LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
VIPGGSS P L +H + + YD + S LG+ A+IVMD++ D++ RL++FY
Sbjct: 288 -VIPGGSSTPWLTAEHY--EAPLTYDGMIKAGSMLGSGAIIVMDETADLIAVTRRLAHFY 344
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
HESCGQCTPCREGTGWL IM R++ G A E+I +L + + G TICAL D AA P
Sbjct: 345 AHESCGQCTPCREGTGWLERIMIRVENGQACAEDIQVLSDAATHMAGRTICALADGAAAP 404
Query: 458 VQGLIRHFRPELERR 472
+ +++HF E+ R
Sbjct: 405 ILSMLKHFPDEVRAR 419
>gi|372489656|ref|YP_005029221.1| NADH-quinone oxidoreductase subunit F [Dechlorosoma suillum PS]
gi|359356209|gb|AEV27380.1| NADH-quinone oxidoreductase, F subunit [Dechlorosoma suillum PS]
Length = 442
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/401 (51%), Positives = 274/401 (68%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
LK + RG + K ++ + + ++ EVK S LRGRGGAGFP+GLKWSFMP+ G
Sbjct: 23 LKDYVARGGYEALKKILAEKIPQEQVIAEVKTSVLRGRGGAGFPTGLKWSFMPRSFPGD- 81
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
Y+V N+DE EPGT KDR+I+R++PH ++EG IA M A+ Y YI GE K E
Sbjct: 82 KYVVCNSDEGEPGTFKDRDILRYNPHSVIEGMAIAAYAMGATRGYNYIHGEIWEVYKRFE 141
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EA AAG +G+N GSG++F++ H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 142 DALDEARAAGFIGQNILGSGFNFELFAHHGYGAYICGEETALLESIEGKKGQPRFKPPFP 201
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET P I+R G + F + G+ NN GTKLF +SGHVN+P E
Sbjct: 202 ASFGLYGKPTTINNTETFGSIPFIIRDGGEKFLNLGKPNNGGTKLFSISGHVNRPGNYEI 261
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GGVRGG L AVIPGGSS P+LP + + MDYD++ S LG
Sbjct: 262 PLGTPFSTLLEM-AGGVRGG-RKLKAVIPGGSSAPVLPGDVMMECTMDYDSISKAGSMLG 319
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++T +V A+ RLS+FY ESCGQCTPCREGT WL+ ++ R++ G + +++D
Sbjct: 320 SGAVIVMDETTCMVKALERLSFFYHEESCGQCTPCREGTPWLYKVVSRIEHGLGRPDDLD 379
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L V + I G TICALGDAAA+PV+ I+HFR E I+
Sbjct: 380 LLDSVCEGIMGRTICALGDAAAFPVKSFIKHFRDEFVHHIE 420
>gi|254373577|ref|ZP_04989063.1| NADH dehydrogenase I [Francisella tularensis subsp. novicida
GA99-3549]
gi|151571301|gb|EDN36955.1| NADH dehydrogenase I [Francisella novicida GA99-3549]
Length = 424
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/380 (55%), Positives = 260/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREI+R+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNAPGQ-KYVVCNSDEGEPGTCKDREILRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGTNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLY PT + N ET A P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYDKPTNINNTETYASVPA 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G +WF G + + GTKLFCVSGHV + VE + +P KEL+D CGGVR G +
Sbjct: 220 ILQYGGEWFKKLGTEKSGGTKLFCVSGHVQQQRVVEIGLGMPFKELLD-MCGGVRNG-NK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ A S LG+ AV+V+D++ +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTADEMMAVTMDYESIAAAGSMLGSGAVVVLDETACMVRTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G + E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGRPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIKEH 476
PVQ I FR E I+ +
Sbjct: 398 PVQSYIDKFRHEFVYMIENN 417
>gi|418287462|ref|ZP_12900060.1| ubiquinone dehydrogenase, F subunit [Neisseria meningitidis NM233]
gi|418289714|ref|ZP_12901966.1| ubiquinone dehydrogenase, F subunit [Neisseria meningitidis NM220]
gi|421553994|ref|ZP_15999945.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
98008]
gi|421568428|ref|ZP_16014151.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM3001]
gi|372203076|gb|EHP16808.1| ubiquinone dehydrogenase, F subunit [Neisseria meningitidis NM220]
gi|372203729|gb|EHP17341.1| ubiquinone dehydrogenase, F subunit [Neisseria meningitidis NM233]
gi|402334030|gb|EJU69325.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
98008]
gi|402341370|gb|EJU76549.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM3001]
Length = 433
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|222110091|ref|YP_002552355.1| NADH-quinone oxidoreductase subunit F [Acidovorax ebreus TPSY]
gi|221729535|gb|ACM32355.1| NADH-quinone oxidoreductase, F subunit [Acidovorax ebreus TPSY]
Length = 453
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/406 (51%), Positives = 272/406 (66%), Gaps = 9/406 (2%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA------DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS 129
LK RG + + L+ K D ++ +K+SGLRGRGGAGFP+GLKWSFMP+
Sbjct: 40 LKDYEARGGYQALRKLLGKDGGEGLTQDQVIATMKESGLRGRGGAGFPTGLKWSFMPRQF 99
Query: 130 DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNER 189
G+ YLV N+DE EPGTCKDR+I+ ++PH ++EG +IA M S Y YI GE
Sbjct: 100 PGQ-KYLVCNSDEGEPGTCKDRDILMYNPHIVIEGMIIAAYAMGISVGYNYIHGEIFQVY 158
Query: 190 KNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLK 249
+ E A +EA AAG LG N GS + F +H H+G GAYICGEETALLESLEGK+G+PR K
Sbjct: 159 ERFEAALEEARAAGYLGDNILGSSFSFQLHAHHGFGAYICGEETALLESLEGKKGQPRFK 218
Query: 250 PPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPC 309
PPFPA+ GLYG PTT+ N ET A P I+R G + G+ NN GTK+F VSG V +P
Sbjct: 219 PPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLECGKPNNGGTKIFSVSGDVERPG 278
Query: 310 TVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQ 369
E + P +L++ GGVR G L AVIPGGSS P+LP I + MDYD++
Sbjct: 279 NYEVPLGTPFAKLLEL-AGGVRKG-RQLKAVIPGGSSAPVLPASIIMECTMDYDSIAKAG 336
Query: 370 SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKL 429
S LG+ AVIVMD S ++V+++ RLSYFY HESCGQCTPCREGTGW+W ++ R++ +
Sbjct: 337 SMLGSGAVIVMDDSRNMVESLLRLSYFYAHESCGQCTPCREGTGWMWRVINRIQHEAGRE 396
Query: 430 EEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
++D+L V I+G TICALGDAAA PV+ +++HFRPE E I+
Sbjct: 397 SDLDLLNSVADNIQGRTICALGDAAAMPVRAMLKHFRPEFEALIRN 442
>gi|421564451|ref|ZP_16010250.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM3081]
gi|402346048|gb|EJU81152.1| NADH oxidoreductase (quinone), F subunit [Neisseria meningitidis
NM3081]
Length = 433
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGL GRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLCGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMVGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|351731273|ref|ZP_08948964.1| NADH-quinone oxidoreductase subunit F [Acidovorax radicis N35]
Length = 451
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/388 (53%), Positives = 264/388 (68%), Gaps = 3/388 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I++
Sbjct: 67 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRSFPGQ-KYLVCNSDEGEPGTCKDRDILQF 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE E A +EA AAG LG GS + F
Sbjct: 126 NPHIVIEGMIIAAYAMGISVGYNYIHGEIFQTYDRFEEALEEARAAGYLGDKILGSNFSF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 186 QLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG V KP E M P +L++ GGVR G
Sbjct: 246 IIRNGGAAYLECGKPNNGGTKIFSVSGDVEKPGNYEVPMGTPFAKLLEL-AGGVRKG-RQ 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + +DYD++ S LG+ AVIVMD S +V+++ RLSYF
Sbjct: 304 LKAVIPGGSSSPVLPASIIMECTLDYDSIAKAGSMLGSGAVIVMDDSRSMVESLLRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGW+W +++R++ + ++D+L V I+G TICALGDAAA
Sbjct: 364 YSHESCGQCTPCREGTGWMWRVIDRIQHNQGRTGDLDLLNSVADNIQGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPELERRIKEHAERELLEA 484
PV+ +I+HFRPE E I+ +A + A
Sbjct: 424 PVRAMIKHFRPEFEALIRNNASQAATSA 451
>gi|395004005|ref|ZP_10388094.1| NADH-quinone oxidoreductase, F subunit [Acidovorax sp. CF316]
gi|394318105|gb|EJE54575.1| NADH-quinone oxidoreductase, F subunit [Acidovorax sp. CF316]
Length = 452
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/421 (50%), Positives = 279/421 (66%), Gaps = 10/421 (2%)
Query: 61 EDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKG------ADWIVNEVKKSGLRGRGGA 114
E +I+ L G + +K RG + + ++ +G D ++ VK+SGLRGRGGA
Sbjct: 26 EPQIYAGLDGTNWS-IKDYEARGGYQALRKILAQGEGAGLTQDQVIATVKESGLRGRGGA 84
Query: 115 GFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA 174
GFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I++ +PH ++EG +IA M
Sbjct: 85 GFPTGLKWSFMPRSFPGQ-KYLVCNSDEGEPGTCKDRDILQFNPHIVIEGMIIAAYAMGI 143
Query: 175 SAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETA 234
S Y YI GE E A +EA AAG LG GS + F +H +G GAYICGEETA
Sbjct: 144 SVGYNYIHGEIFQTYDRFEEALEEARAAGYLGDKILGSNFSFQLHAAHGFGAYICGEETA 203
Query: 235 LLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNS 294
LLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G + G+ NN
Sbjct: 204 LLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLECGKPNNG 263
Query: 295 GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHI 354
GTK+F VSG V KP E M P +L++ GGVR G L AVIPGGSS P+LP I
Sbjct: 264 GTKIFSVSGDVEKPGNYEVPMGTPFAKLLEL-AGGVRKG-RQLKAVIPGGSSSPVLPASI 321
Query: 355 CDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGW 414
+ +DYD++ S LG+ AVIVMD S +V+++ RLSYFY HESCGQCTPCREGTGW
Sbjct: 322 IMECTLDYDSIAKAGSMLGSGAVIVMDDSRSMVESLLRLSYFYSHESCGQCTPCREGTGW 381
Query: 415 LWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+W +++R++ G + ++++L V I+G TICALGDAAA PV+ +I+HFRPE E I+
Sbjct: 382 MWRVIDRIQHGQGRDGDLNLLNSVADNIQGRTICALGDAAAMPVRAMIKHFRPEFEALIR 441
Query: 475 E 475
+
Sbjct: 442 Q 442
>gi|345877980|ref|ZP_08829711.1| NADH-quinone oxidoreductase subunit C [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225019|gb|EGV51391.1| NADH-quinone oxidoreductase subunit C [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 433
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/404 (51%), Positives = 285/404 (70%), Gaps = 5/404 (1%)
Query: 75 FLKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
L+ RG + K ++ + + ++ EVK+SGLRGRGGAGFP+GLKWSF+ + + G+
Sbjct: 23 LLEQYQSRGGYEVLKKILKEKTPPEQLIEEVKQSGLRGRGGAGFPTGLKWSFITRNAPGQ 82
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
Y+V N+DE EPGT KDR+I+R++PH+L+EG +IAG + A+ Y YIRGE+ +
Sbjct: 83 -KYVVCNSDEGEPGTFKDRDILRYNPHQLIEGMIIAGYCIGATCGYNYIRGEFWEPYERF 141
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
E A +EA AAGLLG++ GSG+DF++H H GAGAY+CGEETALLES+EGK+G+PR KPPF
Sbjct: 142 EAALEEARAAGLLGEDLFGSGFDFELHAHLGAGAYVCGEETALLESIEGKKGQPRFKPPF 201
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GLYG PT + N E++A P IL +G WFA G KN+ G+KLF +SG++N P E
Sbjct: 202 PAHFGLYGRPTIINNTESLASIPMILEKGGKWFADVGVKNSGGSKLFSISGNLNNPGVFE 261
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
M P EL++ GG++ G + AVIPGGSS P++P + D+ MDYDA+ S L
Sbjct: 262 IPMGTPFSELLEM-AGGMKDG-RKIKAVIPGGSSSPVIPGEMMMDLTMDYDAIANAGSML 319
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
G+ AVIV+D + +V + R+SYFY ESCGQCTPCREGTGWL+ ++ R++ G E++
Sbjct: 320 GSGAVIVLDDTNCMVRVLERMSYFYHEESCGQCTPCREGTGWLYRVVSRIENGKGCQEDL 379
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
D+L +V +I GHTICALGDAAA PVQG++++FR E + I
Sbjct: 380 DLLDDVAAKIAGHTICALGDAAAMPVQGMLKYFRDEFQYHIDHQ 423
>gi|388569730|ref|ZP_10156117.1| NADH-quinone oxidoreductase subunit F [Hydrogenophaga sp. PBC]
gi|388263020|gb|EIK88623.1| NADH-quinone oxidoreductase subunit F [Hydrogenophaga sp. PBC]
Length = 453
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/429 (51%), Positives = 281/429 (65%), Gaps = 10/429 (2%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA------DWIVNEVKK 105
+T F G +I+ +L G + LK RG + + ++ K D ++ VK+
Sbjct: 16 QTCFHGRHISPQIYADLDG-KNWSLKDYEARGGYKALRKILGKDGGEPLTPDQVIATVKE 74
Query: 106 SGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGC 165
S LRGRGGAGFPSGLKWSFMP+ G+ YLV N+DE EPGTCKDR+I+ ++PH ++EG
Sbjct: 75 SALRGRGGAGFPSGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTCKDRDILMYNPHIVIEGM 133
Query: 166 LIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAG 225
IA M S Y YI GE + E A +EA AAGLLG GS + F +H H+G G
Sbjct: 134 AIAAYAMGISVGYNYIHGEIFEVYERFEAALEEARAAGLLGDKILGSDFSFQLHGHHGFG 193
Query: 226 AYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWF 285
AYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G +
Sbjct: 194 AYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAY 253
Query: 286 ASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGS 345
G+ NN GTK+F VSG V P E + P +L++ GGVR G L AVIPGGS
Sbjct: 254 LEIGKPNNGGTKIFSVSGDVEMPGNFEIPLGTPFSKLLEL-AGGVRKG-RQLKAVIPGGS 311
Query: 346 SVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQC 405
S P+LP HI + MDYD++ S LG+ AVIVMD S D+V+++ RLSYFY HESCGQC
Sbjct: 312 SAPVLPAHIMMECTMDYDSIAKAGSMLGSGAVIVMDDSRDMVESLKRLSYFYMHESCGQC 371
Query: 406 TPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHF 465
TPCREGTGWLW +++R+ G + E++ +L V + I G TICALGDAAA PV+ +I+HF
Sbjct: 372 TPCREGTGWLWRMVDRIDRGLGRPEDMQLLDNVAENIMGRTICALGDAAAMPVRAMIKHF 431
Query: 466 RPELERRIK 474
R E E +I
Sbjct: 432 RHEFEAKIN 440
>gi|254876264|ref|ZP_05248974.1| NADH dehydrogenase I [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254842285|gb|EET20699.1| NADH dehydrogenase I [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 424
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 259/378 (68%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREIMR+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNTPGQ-KYVVCNSDEGEPGTCKDREIMRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGSNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLYG PT + N ET A +P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYGRPTNINNTETYASAPV 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G WF + G + + GTKLFC+SGHV +E + P K++++ CGGVR G
Sbjct: 220 ILQHGGQWFKNLGTEKSGGTKLFCISGHVKHQKVMEIGLGTPFKDVLEM-CGGVRNG-HK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTGEEMLKVTMDYESIAEAGSMLGSGAVVVLDETTCMVKTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G+ K E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGDGKPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIK 474
PVQ I FR E I+
Sbjct: 398 PVQSYINKFREEFVYMIE 415
>gi|34496401|ref|NP_900616.1| NADH-ubiquinone oxidoreductase, chain F [Chromobacterium violaceum
ATCC 12472]
gi|34102254|gb|AAQ58620.1| NADH-ubiquinone oxidoreductase, chain F [Chromobacterium violaceum
ATCC 12472]
Length = 431
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/380 (53%), Positives = 259/380 (68%), Gaps = 4/380 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+R++P
Sbjct: 48 VIAEVKNSGLRGRGGAGFPTGLKWSFMPRSFPG-DKYVVCNTDEGEPGTFKDRDIIRYNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A Y YI GE + E A +EA AG LG+N GSG++F++
Sbjct: 107 HSLIEGMIIAGYAMGTKAGYNYIHGEIFEDYLLFEEALEEARKAGFLGQNILGSGFNFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N E+ A P I+
Sbjct: 167 YAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTESFASVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G F G+ NN GTKLF VSGHVN+P E + P EL++ GG+R G L
Sbjct: 227 RDGAQTFLEKGKPNNGGTKLFSVSGHVNRPGNYEIALGTPFSELLEM-AGGMRDG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ AVIVM++ +V A+ RL+YFY
Sbjct: 285 AVIPGGSSAPVLPADIMMQCTMDYDSIAKAGSMLGSGAVIVMNEDVCMVKALERLAYFYH 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R+ G + ++++L V + G TICAL DAA +PV
Sbjct: 345 EESCGQCTPCREGTGWLYKVIHRIASGQGRKGDLELLDSVGNNMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHAE 478
+ +HFR E E I EH +
Sbjct: 405 RSFTKHFRNEFEYAI-EHGK 423
>gi|326799005|ref|YP_004316824.1| NADH-quinone oxidoreductase subunit F [Sphingobacterium sp. 21]
gi|326549769|gb|ADZ78154.1| NADH-quinone oxidoreductase, F subunit [Sphingobacterium sp. 21]
Length = 450
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/387 (52%), Positives = 272/387 (70%), Gaps = 14/387 (3%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+V EVKKSGLRGRGGAGFP+G+KWSF+ K +G P YLV NADESEPGT KDR +M H P
Sbjct: 42 VVEEVKKSGLRGRGGAGFPTGMKWSFLAK-PEGVPRYLVCNADESEPGTFKDRYLMTHIP 100
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG ++A + A+ +YIY+RGE + + + LERA +EA AAG LG N G+GY+ ++
Sbjct: 101 HALIEGMIVASYALGANTSYIYVRGEMMPQIRILERAIEEAKAAGFLGTNILGTGYNLEL 160
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
++ G GAYICGEETALLESLEGK+G PR+KPPFPA AGLY CPT V NVE++A + IL
Sbjct: 161 YVQPGGGAYICGEETALLESLEGKRGNPRIKPPFPAVAGLYNCPTVVNNVESIAATVPIL 220
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI--DRHCGGVRGGWDN 336
G + +A G + ++GTKL SG++NKP E E+ +P++E I D +CGG+ G
Sbjct: 221 NMGGEEYAKIGIERSTGTKLISASGNINKPGVYEIELGLPVEEFIYSDEYCGGITNG-KR 279
Query: 337 LLAVIPGGSSVPLLPKHIC------DDVLMDYDALK----AVQSGLGTAAVIVMDKSTDV 386
L AV+ GGSSVP+LP ++ ++ LM Y++L A + LG+ IV D+ +
Sbjct: 280 LKAVVAGGSSVPILPANLILKTAKGENRLMTYESLADGGFATGTMLGSGGFIVFDEDQCI 339
Query: 387 VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT 446
V + FY HESCGQC+PCREGTGW+ ++ RL+ G+ K+ +ID+L +V+K+IEG+T
Sbjct: 340 VRNTWNFARFYHHESCGQCSPCREGTGWMEKVLHRLEYGHGKMSDIDLLVDVSKKIEGNT 399
Query: 447 ICALGDAAAWPVQGLIRHFRPELERRI 473
IC LGDAAAWPV IRHFR E E +
Sbjct: 400 ICPLGDAAAWPVASAIRHFRDEFEWHV 426
>gi|121593382|ref|YP_985278.1| NADH-quinone oxidoreductase subunit F [Acidovorax sp. JS42]
gi|120605462|gb|ABM41202.1| NADH dehydrogenase subunit F [Acidovorax sp. JS42]
Length = 453
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/406 (51%), Positives = 272/406 (66%), Gaps = 9/406 (2%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA------DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVS 129
LK RG + + L+ K D ++ +K+SGLRGRGGAGFP+GLKWSFMP+
Sbjct: 40 LKDYEARGGYQALRKLLGKDGGEGLTQDQVIATMKESGLRGRGGAGFPTGLKWSFMPRQF 99
Query: 130 DGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNER 189
G+ YLV N+DE EPGTCKDR+I+ ++PH ++EG +IA M S Y YI GE
Sbjct: 100 PGQ-KYLVCNSDEGEPGTCKDRDILMYNPHIVIEGMIIAAYAMGISVGYNYIHGEIFQVY 158
Query: 190 KNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLK 249
+ E A +EA AAG LG N GS + F +H H+G GAYICGEETALLESLEGK+G+PR K
Sbjct: 159 ERFEAALEEARAAGYLGDNILGSSFSFQLHAHHGFGAYICGEETALLESLEGKKGQPRFK 218
Query: 250 PPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPC 309
PPFPA+ GLYG PTT+ N ET A P I+R G + G+ NN GTK+F VSG V +P
Sbjct: 219 PPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLECGKPNNGGTKIFSVSGDVERPG 278
Query: 310 TVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQ 369
E + P +L++ GGVR G L AVIPGGSS P+LP I + MDYD++
Sbjct: 279 NYEVPLGTPFAKLLEL-AGGVRKG-RQLKAVIPGGSSAPVLPASIIMECTMDYDSIAKAG 336
Query: 370 SGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKL 429
S LG+ AVIVMD S ++V+++ RLSYFY HESCGQCTPCREGTGW+W ++ R++ +
Sbjct: 337 SMLGSGAVIVMDDSRNMVESLLRLSYFYAHESCGQCTPCREGTGWMWRVINRIQHEAGRE 396
Query: 430 EEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
++D+L V I+G TICALGD+AA PV+ +++HFRPE E I+
Sbjct: 397 SDLDLLNSVADNIQGRTICALGDSAAMPVRAMLKHFRPEFEALIRN 442
>gi|416179746|ref|ZP_11611182.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M6190]
gi|325131608|gb|EGC54315.1| NADH:ubiquinone dehydrogenase, F subunit [Neisseria meningitidis
M6190]
Length = 433
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 266/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A +
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALE 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCRE TGWL+ I+ R+ G K+E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCRESTGWLYRIVHRIVEGKGKMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|404379853|ref|ZP_10984902.1| NADH oxidoreductase (quinone), F subunit [Simonsiella muelleri ATCC
29453]
gi|294484368|gb|EFG32051.1| NADH oxidoreductase (quinone), F subunit [Simonsiella muelleri ATCC
29453]
Length = 433
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/380 (55%), Positives = 258/380 (67%), Gaps = 4/380 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++E+K SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 VIDEMKASGLRGRGGAGFPTGLKWSFMPRSFPG-AKYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E+A QEA AG LGKN GS + F++
Sbjct: 107 HALIEGMIIAGYAMGAEAGYNYIHGEIFEGFQLFEKALQEARDAGFLGKNIMGSEFSFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G ++ GTKLF +SGHV +P E + P EL+ GGVRGG L
Sbjct: 227 RDGGKTFADKGIESAGGTKLFSISGHVERPGNYEVALGTPFSELLAM-AGGVRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ AVIVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPADIMMSCNMDYDSIAKAGSMLGSGAVIVMDEDVCMVKALERLSYFYH 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ I+ R+ +G + E++D+L V + G TICAL DAA +PV
Sbjct: 345 EESCGQCTPCREGTGWLYRIVHRIAMGKGRPEDLDLLDSVGNNMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHAE 478
+ +HFR E E I EH +
Sbjct: 405 RSFTKHFREEFEHYI-EHGK 423
>gi|241763293|ref|ZP_04761350.1| NADH-quinone oxidoreductase, F subunit [Acidovorax delafieldii 2AN]
gi|241367568|gb|EER61855.1| NADH-quinone oxidoreductase, F subunit [Acidovorax delafieldii 2AN]
Length = 451
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/417 (51%), Positives = 279/417 (66%), Gaps = 10/417 (2%)
Query: 63 RIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA------DWIVNEVKKSGLRGRGGAGF 116
+I+ +L G + +K RG +H + ++ K D ++ VK+SGLRGRGGAGF
Sbjct: 28 QIYADLNG-SNWSIKDYEARGGYHALRTILGKDGGEGLTQDQVIATVKESGLRGRGGAGF 86
Query: 117 PSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASA 176
P+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I+ ++PH ++EG +IA M +
Sbjct: 87 PTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTCKDRDILMYNPHIVIEGMIIAAYAMGITV 145
Query: 177 AYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALL 236
Y YI GE + E A +EA AAG LG G+G+ F +H H+G GAYICGEETALL
Sbjct: 146 GYNYIHGEIFQVYERFEAALEEARAAGYLGNGILGTGFSFQLHAHHGFGAYICGEETALL 205
Query: 237 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGT 296
ESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R G + + G+ NN GT
Sbjct: 206 ESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGAAYLACGKPNNGGT 265
Query: 297 KLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICD 356
K+F VSG V +P E + P +L++ GGVR G L AVIPGGSS P+LP I
Sbjct: 266 KIFSVSGDVERPGNYEIPLGTPFSKLLEL-AGGVRTG-RQLKAVIPGGSSSPVLPASIIM 323
Query: 357 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 416
D MDYD++ S LG+ AVIVMD S +V+++ RLSYFY HESCGQCTPCREGTGWLW
Sbjct: 324 DCTMDYDSIAKAGSMLGSGAVIVMDDSRCMVESLKRLSYFYMHESCGQCTPCREGTGWLW 383
Query: 417 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
+++R+ G + ++D+L V I G TICALGDAAA PV+ +I+HFRPE E I
Sbjct: 384 RLVDRIHRGEGRPADMDVLDSVAGNIMGRTICALGDAAAMPVRAMIKHFRPEFEALI 440
>gi|161870818|ref|YP_001599991.1| NADH dehydrogenase I subunit F [Neisseria meningitidis 053442]
gi|161596371|gb|ABX74031.1| NADH dehydrogenase I chain F [Neisseria meningitidis 053442]
Length = 433
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 266/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFETALA 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G +E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGCMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+ Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 IGNQMAGRTICALADAAVFPVRSFTKHFRDEFVYYI-EHG 422
>gi|350563169|ref|ZP_08931991.1| NADH-quinone oxidoreductase, F subunit [Thioalkalimicrobium
aerophilum AL3]
gi|349779033|gb|EGZ33380.1| NADH-quinone oxidoreductase, F subunit [Thioalkalimicrobium
aerophilum AL3]
Length = 427
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/375 (53%), Positives = 261/375 (69%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++EVK S LRGRGGAGFP+GLKWSFM + + G P YL+ N+DESEPGT KDR+IMR++P
Sbjct: 46 IIDEVKTSNLRGRGGAGFPTGLKWSFMNRHAPG-PKYLLCNSDESEPGTFKDRDIMRYNP 104
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG +IAG + A A Y YIRGE+ K A ++A AGLLG+N GSG+ FD+
Sbjct: 105 HQLIEGMMIAGYVIGAHAGYNYIRGEFWEPYKRFTGAVEQAREAGLLGENILGSGHSFDL 164
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H H GAGAYICGEETAL+ES+EGK+G+PR KPPFPA+ GLYG PTT+ N ET+A P IL
Sbjct: 165 HAHLGAGAYICGEETALIESIEGKKGQPRFKPPFPASYGLYGKPTTINNTETLASIPMIL 224
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G +WF G N GTKLF +SGH+NKP E M P K+L+ G +G L
Sbjct: 225 AKGGEWFRDIGVANAGGTKLFSMSGHINKPGNYEIPMGTPFKDLLAEAGGMWKG--RQLK 282
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS +LP + MDYD++ S LG +VI+MD TD+V A+ RL++FY
Sbjct: 283 AVIPGGSSTAVLPAENALAMTMDYDSIAKAGSFLGAGSVIIMDDQTDMVKALERLTWFYY 342
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGW++ ++ R+ G + E+I+ L++V+ +I G IC LGDAAA PV
Sbjct: 343 DESCGQCTPCREGTGWMYRMVHRIVQGKGRPEDIETLKDVSGKIMGRVICGLGDAAAIPV 402
Query: 459 QGLIRHFRPELERRI 473
++H+ E I
Sbjct: 403 ASFLKHYEHEFRHYI 417
>gi|297538951|ref|YP_003674720.1| NADH-quinone oxidoreductase subunit F [Methylotenera versatilis
301]
gi|297258298|gb|ADI30143.1| NADH-quinone oxidoreductase, F subunit [Methylotenera versatilis
301]
Length = 447
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/401 (51%), Positives = 271/401 (67%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +K G + K +V + A I+ EVK SGLRGRGGAGFP+GLKWSFMP+ DG
Sbjct: 41 LETYIKLGGYSALKRIVTEKTKATDIITEVKTSGLRGRGGAGFPTGLKWSFMPRYFDGV- 99
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R++PH+L+EG IA + A Y YI GE + + E
Sbjct: 100 KYLVCNSDEGEPGTFKDRDIIRYNPHQLIEGMAIAAYTLGARVGYNYIHGEIWQDYEIFE 159
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EA AAG LG+N GS ++FD++ +G GAYICGEETAL+ES+EGK+G+PR KPPFP
Sbjct: 160 AALHEAKAAGYLGENILGSNFNFDLYAVHGYGAYICGEETALIESIEGKKGQPRFKPPFP 219
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ G++G PT V N E+ P IL G FA G N+ GTKLF VSGHV KP E
Sbjct: 220 ASYGVFGKPTNVNNTESYTSIPWILEHGGQAFADLGVPNSGGTKLFSVSGHVEKPGNYEV 279
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+M +P EL++ GGV G L AVIPGG S P++P MDY+ L +S LG
Sbjct: 280 KMGMPFNELLEL-AGGVWKG-RKLKAVIPGGPSTPVMPAEAIMAATMDYEGLSKARSSLG 337
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
++IVMD++T +V A+ RLSYF+ ESCGQCTPCREGTGW++ +++R+ G K+E++D
Sbjct: 338 AGSMIVMDETTCMVKALHRLSYFFYEESCGQCTPCREGTGWVYRVIDRIVNGKGKMEDLD 397
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L +V+ I G TICALG+AAA PV I+HFRPE E I+
Sbjct: 398 LLTDVSNNIAGRTICALGEAAATPVLSFIKHFRPEFEYYIQ 438
>gi|167627158|ref|YP_001677658.1| NADH dehydrogenase (quinone) [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597159|gb|ABZ87157.1| NADH dehydrogenase (quinone) [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 424
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 258/378 (68%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ I+ E+K SGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N+DE EPGTCKDREIMR+
Sbjct: 41 EQIIEELKISGLRGRGGAGFPTGLKWSFMPRNTPGQ-KYVVCNSDEGEPGTCKDREIMRN 99
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG IAG + A+A Y Y RGE+ E A EAY AGLLG N SG F
Sbjct: 100 NPHQLIEGMAIAGYVVGATAGYNYTRGEFYEPIARFEDALIEAYQAGLLGSNIKSSGISF 159
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D++ GAGAYICGEETALL SLEGK+G+PR KPPFPA GLYG PT + N ET A +P
Sbjct: 160 DLYSAIGAGAYICGEETALLNSLEGKKGRPRFKPPFPAFKGLYGRPTNINNTETYASAPV 219
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
IL+ G WF + G + + GTKLFC+SGHV +E + P K++++ CGGVR G
Sbjct: 220 ILQHGGQWFKNLGTEKSGGTKLFCISGHVKHQKVMEIGLGTPFKDVLEM-CGGVRNG-HK 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS +L V MDY+++ S LG+ AV+V+D++T +V +ARL+ F
Sbjct: 278 LKAVIPGGSSSKILTGEEMLKVTMDYESIAEAGSMLGSGAVVVLDETTCMVKTLARLADF 337
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL + R+ G K E+ID L V IEG+TIC LGDAAAW
Sbjct: 338 YYEESCGQCTPCREGTGWLARTLHRIVAGEGKPEDIDTLVRVATNIEGNTICGLGDAAAW 397
Query: 457 PVQGLIRHFRPELERRIK 474
PVQ I FR E I+
Sbjct: 398 PVQSYINKFREEFVYMIE 415
>gi|409405594|ref|ZP_11254056.1| NADH dehydrogenase I subunit F [Herbaspirillum sp. GW103]
gi|386434143|gb|EIJ46968.1| NADH dehydrogenase I subunit F [Herbaspirillum sp. GW103]
Length = 431
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/401 (51%), Positives = 276/401 (68%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + K ++ + + ++ ++K SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYDSLKRILNEKITPEQVIADLKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG +I G M + Y YI GE E + E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYAMGITVGYNYIHGEIFAEYERFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N G+G+ F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I + GP +A G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+RGG + AVIPGGSS P++ + D MDYDA+ S LG
Sbjct: 263 PLGTPFSTLLEL-AGGMRGG-KKIKAVIPGGSSAPVIRGDVMMDTTMDYDAIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGW++ ++ER++ G+ K+E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTGWMYRMVERIENGHGKMEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L V I+G TICALGDAAA PV+ +++FR E E I+
Sbjct: 381 VLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHIE 421
>gi|406998654|gb|EKE16566.1| hypothetical protein ACD_10C00911G0002 [uncultured bacterium]
Length = 442
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/376 (53%), Positives = 259/376 (68%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVKKS LRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+IMR +P
Sbjct: 48 VIGEVKKSVLRGRGGAGFPTGLKWSFMPRSFPGD-KYVVCNTDEGEPGTFKDRDIMRFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H ++EG IA M A+ Y Y+ GE K E A EA AAG +G+N SG++F++
Sbjct: 107 HSVIEGMAIAAYAMGANRGYNYVHGEIWETYKRFEEALDEARAAGFIGQNILDSGFNFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLES+EGK+G+PR KPPFPA+ GLYG PTT+ N ET A P IL
Sbjct: 167 FAHHGYGAYICGEETALLESIEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASIPFIL 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+ G + F + G+ NN GTKLF VSGH+N+P E + L++ CGG+RGG L
Sbjct: 227 KMGGEEFLNLGKPNNGGTKLFSVSGHINRPGNYEIPLGTSFATLLEM-CGGMRGG-RKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P++P + + MDYD++ S LG+ AVIVMD++ +V A+ RLS+FY
Sbjct: 285 AVIPGGSSAPVVPADVMMETTMDYDSISKAGSMLGSGAVIVMDETVCMVKALERLSFFYY 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGT W++ ++ R++ G K +++D+L V I G TICALGDAAA PV
Sbjct: 345 EESCGQCTPCREGTAWMYKVIHRIENGLGKPDDMDLLNSVLGNIMGRTICALGDAAALPV 404
Query: 459 QGLIRHFRPELERRIK 474
Q ++HF E E I+
Sbjct: 405 QSFLKHFGSEFEYHIE 420
>gi|94309877|ref|YP_583087.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus metallidurans
CH34]
gi|430805951|ref|ZP_19433066.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus sp. HMR-1]
gi|93353729|gb|ABF07818.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus metallidurans
CH34]
gi|429501779|gb|ELA00106.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus sp. HMR-1]
Length = 431
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 276/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + + ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYKQLRRILEEKVTPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRAFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGAYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AG LG N GSG++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARRAGFLGDNILGSGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GP+ + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLEVGPENYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+RGG + AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFATLLEL-AGGMRGG-KKIKAVIPGGSSAPVVPGDLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGTGWLYRMVNRIEHGEGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWKEFEYHV-EHKQ 424
>gi|333376388|ref|ZP_08468171.1| NADH-quinone oxidoreductase subunit F [Kingella kingae ATCC 23330]
gi|332968230|gb|EGK07307.1| NADH-quinone oxidoreductase subunit F [Kingella kingae ATCC 23330]
Length = 433
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/376 (54%), Positives = 255/376 (67%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++E+K SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 IIDEIKASGLRGRGGAGFPTGLKWSFMPRSFPG-AKYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E+A QEA AG LGKN GS + F++
Sbjct: 107 HALIEGMIIAGYAMGAEAGYNYIHGEIFEGFQLFEKALQEARDAGFLGKNIMGSEFSFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G ++ GTKLF +SGHV +P E + P EL+ GGVRGG L
Sbjct: 227 RDGGKTFADKGIESAGGTKLFSISGHVERPGNYEVALGTPFSELL-AMAGGVRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ AVIVMD+ +V A+ RL+YFY
Sbjct: 285 AVIPGGSSAPVLPADIMMSCNMDYDSIAKAGSMLGSGAVIVMDEDVCMVKALERLAYFYH 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R+ G + +++++L V + G TICAL DAA +PV
Sbjct: 345 EESCGQCTPCREGTGWLYRVVHRIATGKGRPDDLELLDSVGNNMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIK 474
+ +HFR E E IK
Sbjct: 405 RSFTKHFREEFEHYIK 420
>gi|319943353|ref|ZP_08017635.1| NADH-quinone oxidoreductase subunit F [Lautropia mirabilis ATCC
51599]
gi|319743168|gb|EFV95573.1| NADH-quinone oxidoreductase subunit F [Lautropia mirabilis ATCC
51599]
Length = 449
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/432 (50%), Positives = 279/432 (64%), Gaps = 12/432 (2%)
Query: 51 EKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADW--------IVNE 102
++T F G +IF L L+ RG + K ++L GAD ++ E
Sbjct: 12 QETCFHGRHINPQIFAGLTSADGWTLEQYEARGGYQALKRVLL-GADGKQPMTPEEVIAE 70
Query: 103 VKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLL 162
VK SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R++PH ++
Sbjct: 71 VKASGLRGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRYNPHIVI 129
Query: 163 EGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHY 222
EG IA M SA Y YI GE + E A +A AAG LG G+ + F+++ H+
Sbjct: 130 EGMTIAAYAMGISAGYNYIHGEIFRIYERFEEALAQARAAGYLGDRILGTDFSFNLNAHH 189
Query: 223 GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP 282
G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET + P I+R G
Sbjct: 190 GFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFSAVPWIIRNGG 249
Query: 283 DWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIP 342
F G+ NN GTK+F V G V +P E + P +L++ GGVR G L VIP
Sbjct: 250 QAFLEAGKPNNGGTKIFSVGGDVERPGNYEVPLGTPFAKLLEL-AGGVRYG-RKLKMVIP 307
Query: 343 GGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESC 402
GGSS P++P H+ D+ MDYDA+ S LG+ AVIVMD++ V ++ RLSYFY HESC
Sbjct: 308 GGSSAPVIPGHMMMDLTMDYDAIAKAGSMLGSGAVIVMDETRCPVRSLERLSYFYSHESC 367
Query: 403 GQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
GQCTPCREGTGWL+ ++ R++ G + E+ID L V I+G TICALGDAAA PV+G I
Sbjct: 368 GQCTPCREGTGWLYRLVHRIEHGQGRPEDIDELDRVAGNIQGRTICALGDAAAMPVRGFI 427
Query: 463 RHFRPELERRIK 474
+H+R E ++
Sbjct: 428 KHYRDEFVHHVE 439
>gi|415950779|ref|ZP_11556999.1| NADH-quinone oxidoreductase, F subunit [Herbaspirillum frisingense
GSF30]
gi|407757585|gb|EKF67540.1| NADH-quinone oxidoreductase, F subunit [Herbaspirillum frisingense
GSF30]
Length = 431
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/401 (51%), Positives = 275/401 (68%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + K ++ + ++ ++K SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYESLKRILNDKITPEQVIADLKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG +I G M + Y YI GE E + E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYAMGITVGYNYIHGEIFAEYERFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N G+G+ F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 AALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I + GP +A G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFIFQVGPQAYAEMGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+RGG + AVIPGGSS P++ + D MDYDA+ S LG
Sbjct: 263 PLGTPFSTLLEL-AGGMRGG-KKIKAVIPGGSSAPVIRGDVMMDTTMDYDAIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGW++ ++ER++ G+ K+E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTGWMYRMVERIENGHGKMEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L V I+G TICALGDAAA PV+ +++FR E E I+
Sbjct: 381 VLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHIE 421
>gi|195149010|ref|XP_002015452.1| GL11014 [Drosophila persimilis]
gi|194109299|gb|EDW31342.1| GL11014 [Drosophila persimilis]
Length = 445
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 272/438 (62%), Gaps = 21/438 (4%)
Query: 37 TASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA 96
A PP EKT FG L D DR+F NLYG HD LKGA KRGDW+ T L+ KG+
Sbjct: 22 VAGKNDPPKSCLTNEKTTFGPLHDCDRVFQNLYGRHDWRLKGACKRGDWYHTAVLLEKGS 81
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
DWI+ + W+F+ + LV+N E EPGTCKDREI+RH
Sbjct: 82 DWIMEQ-------------------WNFLRSAESKQDKVLVMNCAEGEPGTCKDREIIRH 122
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PHK++EGCL+AG M + A IY+R + NE NL+ A EAY GLLG +AC +G F
Sbjct: 123 EPHKIIEGCLLAGFAMGCNRAIIYVRNRFYNEACNLQFALAEAYRYGLLGPSACDTGIKF 182
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D+ + G Y+CGEETAL++ L GK G+PR +PPF G + P V N E++AV PT
Sbjct: 183 DILVQRG-DRYLCGEETALVKCLMGKIGRPRRRPPFLTEQGYFSHPCVVINAESIAVLPT 241
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
ILRRG W+A GR NSGTKLF +SG VN PCTVEEEMS+P+++LI++H GGVRGGWDN
Sbjct: 242 ILRRGASWWADLGRSYNSGTKLFNISGQVNSPCTVEEEMSMPMRDLIEKHAGGVRGGWDN 301
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
LLA+ PGG S PL+ K + +VLMD++ L+A S LG+ A+IV++K +D + + R F
Sbjct: 302 LLAIFPGGLSTPLINKQVAGEVLMDFECLEAAGSSLGSGALIVVNKQSDPLQVMLRSIQF 361
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAA 455
Y+ +C QCT CR+G WL + +R G A EID + K+I + + IC L
Sbjct: 362 YEKHTCKQCTYCRDGAIWLPELFDRFVKGEAHPHEIDWTLAIGKKIKDSNPICGLAQGQV 421
Query: 456 WPVQGLIRHFRPELERRI 473
L+ +FRP +E RI
Sbjct: 422 NVAVSLVDNFRPYIEDRI 439
>gi|300311100|ref|YP_003775192.1| NADH dehydrogenase I subunit F [Herbaspirillum seropedicae SmR1]
gi|300073885|gb|ADJ63284.1| NADH dehydrogenase I (chain F) oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 431
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/401 (51%), Positives = 276/401 (68%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + K ++ + + ++ ++K SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG +I G M + Y YI GE + + E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYAMGITVGYNYIHGEIFSAYERFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N G+G+ F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I + GP +A G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+RGG + AVIPGGSS P++ + D MDYDA+ S LG
Sbjct: 263 PLGTPFSTLLEL-AGGMRGG-KKIKAVIPGGSSAPVIRGDVMMDTTMDYDAIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGW++ ++ER++ G+ K+E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTGWMYRMVERIENGHGKMEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L V I+G TICALGDAAA PV+ +++FR E E I+
Sbjct: 381 VLNSVADNIQGRTICALGDAAAMPVRAFVKNFREEFEYHIE 421
>gi|325267322|ref|ZP_08133984.1| NADH-quinone oxidoreductase subunit F [Kingella denitrificans ATCC
33394]
gi|324981259|gb|EGC16909.1| NADH-quinone oxidoreductase subunit F [Kingella denitrificans ATCC
33394]
Length = 433
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/380 (53%), Positives = 262/380 (68%), Gaps = 4/380 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ ++P
Sbjct: 48 VIDEVKASGLRGRGGAGFPTGLKWSFMPRSLPG-AKYVVCNTDEGEPGTFKDRDIIMYNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E A +EA AGLLGKN GSG+DF++
Sbjct: 107 HALIEGMIIAGYAMCAEAGYNYIHGEIFEGFQRFEAALKEAREAGLLGKNIMGSGFDFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET++ P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETLSSIPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G + GTKLF +SGHV +P E + P +L++ GG+RGG L
Sbjct: 227 RDGGKTFADQGIEGAGGTKLFSISGHVERPGNYEVPLGTPFAKLLEM-AGGMRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I + MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY
Sbjct: 285 AVIPGGSSAPVLPGDIMMGLNMDYDSIAKAGSMLGSGAIIVMDEDVCMVKALERLSYFYH 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R+ G + +++++L V + G TICAL DAA +PV
Sbjct: 345 EESCGQCTPCREGTGWLYRVVHRIASGKGRPDDLELLDSVGNNMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHAE 478
+ +HFR E E I EH +
Sbjct: 405 RSFTKHFRAEFEHYI-EHGK 423
>gi|345864611|ref|ZP_08816810.1| NADH-quinone oxidoreductase subunit F [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124308|gb|EGW54189.1| NADH-quinone oxidoreductase subunit F [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 427
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 284/404 (70%), Gaps = 5/404 (1%)
Query: 75 FLKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
L+ RG + K ++ + + ++ EVK+SGLRGRGGAGFP+GLKWSF+ + + G+
Sbjct: 17 LLEQYQSRGGYEVLKKILKEKTPPEQLIEEVKQSGLRGRGGAGFPTGLKWSFITRNAPGQ 76
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
Y+V N+DE EPGT KDR+I+R++PH+L+EG +IAG + A+ Y YIRGE+ +
Sbjct: 77 -KYVVCNSDEGEPGTFKDRDILRYNPHQLIEGMIIAGYCIGATCGYNYIRGEFWEPYERF 135
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
E A +EA AAGLLG++ GSG+DF++H H GAGAY+CGEETALLES+EGK+G+PR KPPF
Sbjct: 136 EAALEEARAAGLLGEDLFGSGFDFELHAHLGAGAYVCGEETALLESIEGKKGQPRFKPPF 195
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ GLYG PT + N E++A P IL +G WFA G KN+ G+KLF +SG++N P E
Sbjct: 196 PAHFGLYGRPTIINNTESLASIPMILEKGGKWFADVGVKNSGGSKLFSISGNLNNPGVFE 255
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
M P EL++ GG++ G + AVIPGGSS P++P + D+ MDYDA+ S L
Sbjct: 256 IPMGTPFSELLE-MAGGMKDG-RKIKAVIPGGSSSPVIPGEMMMDLTMDYDAIANAGSML 313
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
G+ AVIV+D + +V + R+SYFY ESCGQCTPCREGTGWL+ ++ R++ G E++
Sbjct: 314 GSGAVIVLDDTNCMVRVLERMSYFYHEESCGQCTPCREGTGWLYRVVSRIENGKGCQEDL 373
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 476
D+L +V +I G TICALGDAAA PVQG++++FR E + I
Sbjct: 374 DLLDDVAAKIAGRTICALGDAAAMPVQGMLKYFRDEFQYHIDHQ 417
>gi|406973928|gb|EKD97175.1| hypothetical protein ACD_23C01026G0001 [uncultured bacterium]
Length = 451
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/379 (54%), Positives = 262/379 (69%), Gaps = 3/379 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I+ +
Sbjct: 67 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTCKDRDILMY 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG GS + F
Sbjct: 126 NPHIVIEGMIIAAYAMGISVGYNYIHGEIFQTYERFEAALEEARAAGYLGNGILGSSFSF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 186 QLHAHHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + + G+ NN GTK+F VSG V +P E M P +L++ GGVR G
Sbjct: 246 IIRNGGAAYLACGKPNNGGTKIFSVSGDVERPGNYEVPMGTPFAKLLEL-AGGVRTG-RQ 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP + + MDYD++ S LG+ AVIVMD S +V+++ RLSYF
Sbjct: 304 LKAVIPGGSSSPVLPASVIMECTMDYDSIAKAGSMLGSGAVIVMDDSRCMVESLKRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGWLW +++R+ G + ++D+L V I G TICALGDAAA
Sbjct: 364 YMHESCGQCTPCREGTGWLWRLVDRIHRGEGRPADMDVLDSVASNIMGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPELERRIKE 475
PV+ +I+HFRPE + I+
Sbjct: 424 PVRAMIKHFRPEFDTLIRN 442
>gi|350570516|ref|ZP_08938869.1| NADH-quinone oxidoreductase subunit F [Neisseria wadsworthii 9715]
gi|349796141|gb|EGZ49931.1| NADH-quinone oxidoreductase subunit F [Neisseria wadsworthii 9715]
Length = 431
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/420 (50%), Positives = 274/420 (65%), Gaps = 10/420 (2%)
Query: 64 IFTNLYGMHDPF---LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPS 118
IF N+ H+P L +KRG + + ++ + D +++EVK SGLRGRGGAGFP+
Sbjct: 9 IFENV-DTHNPSCWKLDEYVKRGGYQALRKILTENMSQDDVISEVKTSGLRGRGGAGFPT 67
Query: 119 GLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAY 178
GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y
Sbjct: 68 GLKWSFMPRSFPG-AKYVVCNTDEGEPGTFKDRDIINFNPHSLIEGMIIAGYAMGAEAGY 126
Query: 179 IYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLES 238
YI GE + E A QEA AG LGKN G+ + F++ H+G GAYICGEETALLES
Sbjct: 127 NYIHGEIFEGYQRFEAALQEARDAGFLGKNIMGTDFSFELFAHHGYGAYICGEETALLES 186
Query: 239 LEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKL 298
LEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+R FA G +N GTKL
Sbjct: 187 LEGKKGQPRFKPPFPASYGLYGKPTTINNTETFASVPFIIRDSGQAFADKGIENAGGTKL 246
Query: 299 FCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDV 358
F +SGHV +P E + P +L++ GG++ G L AVIPGGSS P+LP + +
Sbjct: 247 FSISGHVERPGNYEVPLGTPFAKLLEM-AGGMKDG-KKLKAVIPGGSSAPVLPGEVMMTL 304
Query: 359 LMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMI 418
MDYD++ S LG+ A+IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ +
Sbjct: 305 NMDYDSIAKAGSMLGSGAIIVMDEDVCMVKALERLSYFYHEESCGQCTPCREGTGWLYRV 364
Query: 419 MERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+ R+ G + E++D+L V + G TICAL DAA +PV+ +HFR E E I EH +
Sbjct: 365 VHRIAEGKGRPEDLDLLDSVGNNMAGRTICALADAAVFPVRSFTKHFRHEFEHYI-EHGK 423
>gi|381402245|ref|ZP_09927119.1| NADH dehydrogenase I subunit F [Kingella kingae PYKK081]
gi|380832775|gb|EIC12669.1| NADH dehydrogenase I subunit F [Kingella kingae PYKK081]
Length = 433
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/376 (54%), Positives = 255/376 (67%), Gaps = 3/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I++E+K SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+ +P
Sbjct: 48 IIDEIKASGLRGRGGAGFPTGLKWSFMPRSFPG-AKYVVCNTDEGEPGTFKDRDIIMFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A A Y YI GE + E+A QEA AG LGKN GS + F++
Sbjct: 107 HALIEGMIIAGYAMGAEAGYNYIHGEIFEGFQLFEKALQEARDAGFLGKNIMGSEFSFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I+
Sbjct: 167 FAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFASVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G FA G ++ GTKLF +SGHV +P E + P +L+ GGVRGG L
Sbjct: 227 RDGGKTFADKGIESAGGTKLFSISGHVERPGNYEVALGTPFSKLLAM-AGGVRGG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ AVIVMD+ +V A+ RL+YFY
Sbjct: 285 AVIPGGSSAPVLPADIMMSCNMDYDSIAKAGSMLGSGAVIVMDEDVCMVKALERLAYFYH 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R+ G + +++++L V + G TICAL DAA +PV
Sbjct: 345 EESCGQCTPCREGTGWLYRVVHRIATGKGRPDDLELLDSVGNNMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIK 474
+ +HFR E E IK
Sbjct: 405 RSFTKHFREEFEHYIK 420
>gi|88812971|ref|ZP_01128214.1| NADH dehydrogenase I chain F [Nitrococcus mobilis Nb-231]
gi|88789749|gb|EAR20873.1| NADH dehydrogenase I chain F [Nitrococcus mobilis Nb-231]
Length = 427
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/389 (53%), Positives = 277/389 (71%), Gaps = 6/389 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ E+K+S LRGRGGAGFP+G+KWSFMP+ + G+ Y+V N+DESEPGTCKDR+I+R++P
Sbjct: 43 VIEEIKRSALRGRGGAGFPTGIKWSFMPRNAPGQ-KYIVCNSDESEPGTCKDRDILRYNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H L+EG +IAG M S Y Y+RGE++ E + +E+A EA AAG +G+N G G+ F
Sbjct: 102 HALIEGMVIAGYAMGVSVGYNYLRGEFMREPFQRMEQALDEARAAGYIGENIQGRGFGFQ 161
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H YGAGAYICGEE+ LLESLEGK+G PR KPPFPA GLYG PTTV N ET A P+I
Sbjct: 162 LHNVYGAGAYICGEESGLLESLEGKKGMPRYKPPFPAQFGLYGRPTTVNNTETFASVPSI 221
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+R G +WF GR NN G K F VSGHV KP E + P +EL+ + GGVR L
Sbjct: 222 IRNGAEWFLELGRPNNGGVKCFSVSGHVVKPGNYEVPLGTPFRELL-KMAGGVRDE-HKL 279
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSS+P++P ++ MDYD+L SGLG+ V+VMD++TD++ I R+S FY
Sbjct: 280 KAVIPGGSSMPMVPGDQMLELDMDYDSLVKAGSGLGSGGVVVMDETTDMIKVILRISRFY 339
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREG GW++ +++R+ G ++ ++++L+ QI GHTICA G+AAAWP
Sbjct: 340 YAESCGQCTPCREGCGWMYRVIKRIYEGKGRMADLELLESAAGQIAGHTICAFGEAAAWP 399
Query: 458 VQGLIRHFRPELERRIKEHAERELLEATA 486
VQ +++H+R E I EH +R ++E A
Sbjct: 400 VQSVLKHWRNEFVHYI-EH-KRSVVEERA 426
>gi|406897320|gb|EKD41312.1| hypothetical protein ACD_73C00769G0003 [uncultured bacterium]
Length = 429
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/418 (49%), Positives = 277/418 (66%), Gaps = 3/418 (0%)
Query: 64 IFTNLYGMHDPFLKGAMKR-GDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKW 122
+ TN G+ D ++ G + + L +V+E+K SGLRGRGGAGF +GLKW
Sbjct: 9 VLTNRVGIKDSHTLAVYEQTGGYQTIQKLFATEPTALVDEIKNSGLRGRGGAGFSAGLKW 68
Query: 123 SFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIR 182
SF+P+ + G+P YL VNADESEPGT KDR +M DPH+L+EG +IA +R++A YIYIR
Sbjct: 69 SFVPQ-NTGQPKYLCVNADESEPGTFKDRLLMEEDPHQLIEGIIIACYAIRSNACYIYIR 127
Query: 183 GEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGK 242
GE+ R+ LE A +EAY G LGKN G GY+ +++IH GAGAYICGEETALL S+EG
Sbjct: 128 GEFDLSRRRLEVAVKEAYDKGYLGKNIFGKGYELNIYIHRGAGAYICGEETALLNSIEGW 187
Query: 243 QGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVS 302
+G+PR+KPPFPA+ GL+GCPT V NVET++ P IL+ G + +G + + GTKLF VS
Sbjct: 188 KGQPRIKPPFPASKGLFGCPTVVNNVETISALPFILQNGAASYKKWGTEKSPGTKLFSVS 247
Query: 303 GHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDY 362
GHV KP E + PLK+LI + CGG+ G L AV+PGGSSVP+L + V +DY
Sbjct: 248 GHVVKPGVYEVALGYPLKDLIYKDCGGILNG-KKLKAVVPGGSSVPVLTAADIETVNLDY 306
Query: 363 DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERL 422
+++ S LG+ VIVMD+ D+V A+ LS FY HESCGQCTPCREGTGW+ I++R+
Sbjct: 307 ESIAQHGSMLGSGGVIVMDEDVDMVWALQTLSRFYAHESCGQCTPCREGTGWINKILKRV 366
Query: 423 KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERE 480
++ +L E+ + G TIC L DA A PV I+ F + ++ +K+ E
Sbjct: 367 LHEGGTEGDLALLNEICDNMVGKTICVLADALAMPVVSYIKKFPEDFKKHLKKTTSSE 424
>gi|345876269|ref|ZP_08828043.1| NADH-quinone oxidoreductase subunit F [Neisseria weaveri LMG 5135]
gi|417957634|ref|ZP_12600554.1| NADH-quinone oxidoreductase subunit F [Neisseria weaveri ATCC
51223]
gi|343966874|gb|EGV35126.1| NADH-quinone oxidoreductase subunit F [Neisseria weaveri LMG 5135]
gi|343967967|gb|EGV36205.1| NADH-quinone oxidoreductase subunit F [Neisseria weaveri ATCC
51223]
Length = 431
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 267/405 (65%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ RG + + ++ + D +++EVK SGLRGRGGAGFP+GLKWSFMP+ G
Sbjct: 23 LESYKARGGYQALRKILTENLSQDDVISEVKASGLRGRGGAGFPTGLKWSFMPRSFPG-A 81
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
Y+V N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E
Sbjct: 82 KYVVCNTDEGEPGTFKDRDIINFNPHALIEGMIIAGYAMGAEAGYNYIHGEIFEGYQRFE 141
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A EA AG LGKN G+ + F++ H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 142 QALAEAREAGFLGKNIMGTDFSFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 201
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G FA G +N GTKLF +SGHV +P E
Sbjct: 202 ASFGLYGKPTTINNTETFASVPFIIRDGGKTFADIGIENAGGTKLFSISGHVERPGNYEV 261
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+R G L AVIPGGSS P+LP + + MDYD++ S LG
Sbjct: 262 PLGTPFAKLLEM-AGGMRNG-KKLKAVIPGGSSAPVLPGDVMMTLNMDYDSIAKAGSMLG 319
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ A+IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ ++ R+ G + E+++
Sbjct: 320 SGAIIVMDEDVCMVKALERLSYFYHEESCGQCTPCREGTGWLYRVVHRIAEGKGRPEDLE 379
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + G TICAL DAA +PV+ +HFR E E I EH +
Sbjct: 380 LLDSVGNNMAGRTICALADAAVFPVRSFTKHFRAEFEYYI-EHGK 423
>gi|239816478|ref|YP_002945388.1| NADH-quinone oxidoreductase subunit F [Variovorax paradoxus S110]
gi|239803055|gb|ACS20122.1| NADH-quinone oxidoreductase, F subunit [Variovorax paradoxus S110]
Length = 446
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/405 (52%), Positives = 270/405 (66%), Gaps = 5/405 (1%)
Query: 82 RGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 139
RG + + ++ +G D ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N
Sbjct: 45 RGGYKALRKILTEGLTPDQVIAEVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCN 103
Query: 140 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEA 199
+DE EPGTCKDR+I++ +PH ++EG IA M S Y YI GE E A +EA
Sbjct: 104 SDEGEPGTCKDRDILQFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFQSYDRFEEALEEA 163
Query: 200 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 259
AAG LG GS Y+F +H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLY
Sbjct: 164 RAAGYLGDKIMGSTYNFQLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLY 223
Query: 260 GCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 319
G PTT+ N ET A P I+ G + G+ NN GTK++ VSG V P E M P
Sbjct: 224 GKPTTINNTETFAAVPWIINNGGQAYLECGKPNNGGTKIYSVSGDVELPGNYEVPMGTPF 283
Query: 320 KELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 379
+L++ CGGVR G L AVIPGGSS P+LP I + MDYD++ S LG+ AVIV
Sbjct: 284 SKLLEL-CGGVRKG-RTLKAVIPGGSSSPVLPASIMMECTMDYDSIAKAGSMLGSGAVIV 341
Query: 380 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 439
MD S +V+++ RLSYFY HESCGQCTPCREGTGWL+ +++R+ G + ++D+L V
Sbjct: 342 MDDSRSMVESLRRLSYFYMHESCGQCTPCREGTGWLYRVVDRIHNGQGRASDMDLLNSVA 401
Query: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEA 484
I+G TICALGDAAA PV+ +I+HFR E E I + + ++A
Sbjct: 402 DNIQGRTICALGDAAAMPVRAMIKHFRHEFEALIPGYVPKASVQA 446
>gi|340361179|ref|ZP_08683615.1| NADH-quinone oxidoreductase subunit F [Neisseria macacae ATCC
33926]
gi|339888921|gb|EGQ78338.1| NADH-quinone oxidoreductase subunit F [Neisseria macacae ATCC
33926]
Length = 431
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYSALRRILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALA 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET A P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFASVPFIVRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEIL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|332528756|ref|ZP_08404733.1| NADH-quinone oxidoreductase subunit F [Hylemonella gracilis ATCC
19624]
gi|332041822|gb|EGI78171.1| NADH-quinone oxidoreductase subunit F [Hylemonella gracilis ATCC
19624]
Length = 447
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/400 (53%), Positives = 270/400 (67%), Gaps = 5/400 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
LK RG + K ++ +G D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 39 LKDYESRGGYEALKKILKEGLTQDQVIATVKESGLRGRGGAGFPTGLKWSFMPRQFPGQ- 97
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGTCKDR+I+ ++PH ++EG IA M + Y YI GE + E
Sbjct: 98 KYLVCNSDEGEPGTCKDRDILMYNPHIVIEGMAIAAYAMGITVGYNYIHGEIFEVYERFE 157
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG GSG+ F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 158 AALEEARAAGYLGDKILGSGFSFQLHAHHGFGAYICGEETALLESLEGKKGQPRFKPPFP 217
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G + G+ NN GTK+F VSG V +P E
Sbjct: 218 ASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLEIGKPNNGGTKIFSVSGDVERPGNYEI 277
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ G G L AVIPGGSS P+LP HI + MDYD++ S LG
Sbjct: 278 PLGTPFSKLLELAGGVKGG--KKLKAVIPGGSSAPVLPAHIMMECTMDYDSISKAGSMLG 335
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ D+V+++ RLSYFY HESCGQCTPCREGTGWLW +++R++ G + E++
Sbjct: 336 SGAVIVMDETRDMVESLKRLSYFYMHESCGQCTPCREGTGWLWRLVDRIERGEGRPEDMA 395
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 473
L V I G TICALGDAAA PV+ +I+HFRPE E I
Sbjct: 396 TLDSVAGNIMGRTICALGDAAAMPVRAMIKHFRPEFEALI 435
>gi|298370378|ref|ZP_06981694.1| NADH oxidoreductase (quinone), F subunit [Neisseria sp. oral taxon
014 str. F0314]
gi|298281838|gb|EFI23327.1| NADH oxidoreductase (quinone), F subunit [Neisseria sp. oral taxon
014 str. F0314]
Length = 431
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + ++++VK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYSALRRILSENISQTDVIDQVKTSGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALA 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET A P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFASVPFIVRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEIL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFREEFVHYI-EHG 422
>gi|398836854|ref|ZP_10594180.1| NADH-quinone oxidoreductase, F subunit [Herbaspirillum sp. YR522]
gi|398210641|gb|EJM97283.1| NADH-quinone oxidoreductase, F subunit [Herbaspirillum sp. YR522]
Length = 431
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/401 (51%), Positives = 274/401 (68%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + K ++ + ++ E+K SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYESLKRILNDNITPEQVIAELKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG +I G M + Y YI GE + + E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYAMGITVGYNYIHGEIFSAYEVFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N G+G+ F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I + G +A G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFIFKVGAQAYAEMGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+RGG + AVIPGGSS P++ + + MDYDA+ S LG
Sbjct: 263 PLGTPFSTLLEL-AGGMRGG-KKIKAVIPGGSSAPVIRGDVMMETTMDYDAIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGW++ ++ER++ G+ KLE++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWMYRMVERIESGHGKLEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L V I+G TICALGDAAA PV+ I++FR E E I+
Sbjct: 381 VLNSVADNIQGRTICALGDAAAMPVRAFIKNFREEFEYHIE 421
>gi|198455798|ref|XP_001360108.2| GA20825 [Drosophila pseudoobscura pseudoobscura]
gi|198135400|gb|EAL24682.2| GA20825 [Drosophila pseudoobscura pseudoobscura]
Length = 445
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 271/438 (61%), Gaps = 21/438 (4%)
Query: 37 TASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA 96
A PP EKT FG L D DR+F NLYG HD LKGA KRGDW+ T L+ KG+
Sbjct: 22 VAGKNDPPKSCLTNEKTTFGPLHDCDRVFQNLYGRHDWRLKGACKRGDWYHTAVLLEKGS 81
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
DWI+ + W+F+ + LV+N E EPGTCKDREI+RH
Sbjct: 82 DWIMEQ-------------------WNFLRCAESKQDKVLVMNCAEGEPGTCKDREIIRH 122
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PHK++EGCL+AG M + A IY+R + NE NL+ A EAY GLLG +AC +G F
Sbjct: 123 EPHKIIEGCLLAGFAMGCNRAIIYVRNRFYNEACNLQFALAEAYRYGLLGPSACDTGIKF 182
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D+ + G Y+CGEETAL++ L GK G+PR +PPF G + P V N E++AV PT
Sbjct: 183 DILVQRG-DRYLCGEETALVKCLMGKIGRPRRRPPFLTEQGYFSHPCVVINAESIAVLPT 241
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
ILRRG W+A GR NSGTKLF +SG VN PCTVEEEMS+P+++LI++H GGVRGGWDN
Sbjct: 242 ILRRGASWWADLGRSYNSGTKLFNISGQVNSPCTVEEEMSMPMRDLIEKHAGGVRGGWDN 301
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
LLA+ PGG S PL+ K + +VLMD++ L+A S G+ A+IV++K +D + + R F
Sbjct: 302 LLAIFPGGLSTPLINKQVAGEVLMDFECLEAAGSSFGSGALIVVNKQSDPLQVMLRSIQF 361
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAA 455
Y+ +C QCT CR+G WL + +R G A EID + K+I + + IC L
Sbjct: 362 YEKHTCKQCTYCRDGAIWLPELFDRFVKGEAHPHEIDWTLAIGKKIKDSNPICGLAQGQV 421
Query: 456 WPVQGLIRHFRPELERRI 473
L+ +FRP +E RI
Sbjct: 422 NVAVSLVDNFRPYIEDRI 439
>gi|397689158|ref|YP_006526412.1| NADH dehydrogenase subunit F [Melioribacter roseus P3M]
gi|395810650|gb|AFN73399.1| NADH dehydrogenase subunit F [Melioribacter roseus P3M]
Length = 442
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/398 (50%), Positives = 272/398 (68%), Gaps = 5/398 (1%)
Query: 80 MKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 139
++ G + K + D I+++VKKSGLRGRGGA F +GLKWSFMPK +D P YL +N
Sbjct: 19 LQNGGFEAAKKAFSQSPDDIIDQVKKSGLRGRGGAAFSTGLKWSFMPKTTD-MPKYLCIN 77
Query: 140 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEA 199
DESEPG+ KDR+I ++P +L+EG +IA + A+ AY+YIRGEY K +++A A
Sbjct: 78 GDESEPGSFKDRQIFEYNPFQLIEGVIIACYAIGANTAYLYIRGEYHKWIKLMQQAIDTA 137
Query: 200 YAAGLLG---KNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANA 256
Y G LG KN G + D++IH GAGAYICGEE++L+ S+EGK+G PR+KPPFPA
Sbjct: 138 YEKGYLGEKMKNTFGVDFYCDLYIHKGAGAYICGEESSLMNSIEGKRGYPRVKPPFPAQK 197
Query: 257 GLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMS 316
GL+GCPTT+ NVET+ P I+ +G +WF+ G + GT LF +SGHVNKP E
Sbjct: 198 GLWGCPTTINNVETITNVPPIISKGWEWFSKIGAPKHPGTLLFGISGHVNKPGVYELPTG 257
Query: 317 IPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAA 376
I L ELI GGV G + VIPGGSS+P L + V MD ++LK S +GT
Sbjct: 258 ILLTELIYDVAGGVPGN-KKIKCVIPGGSSMPPLRGDRLEGVRMDAESLKEAGSAIGTGG 316
Query: 377 VIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQ 436
VIVMD+ T+++ + R+++FY HESCGQCTPCREGTGW+ I++R+ GN +++D+L
Sbjct: 317 VIVMDEDTNLLKVLLRITHFYHHESCGQCTPCREGTGWMEKILKRIDQGNGTSKDLDLLV 376
Query: 437 EVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
V + IEG+TICALGDAAAWPV+ +I+ FR E E+ +K
Sbjct: 377 SVAQNIEGNTICALGDAAAWPVKFMIQRFRDEFEKYVK 414
>gi|56478181|ref|YP_159770.1| NADH dehydrogenase I subunit F [Aromatoleum aromaticum EbN1]
gi|56314224|emb|CAI08869.1| NADH dehydrogenase I, chain F [Aromatoleum aromaticum EbN1]
Length = 437
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/402 (51%), Positives = 270/402 (67%), Gaps = 5/402 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ + RG + K ++ + A+ ++ E+K S LRGRGGAGFP+GLKWSFMP+ G
Sbjct: 19 LQDYIGRGGYSALKKIIAEKIPAETVIAELKASSLRGRGGAGFPTGLKWSFMPRSFPG-A 77
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YL N+DE EPGT KDR+I+R++PH ++EG IA M Y YI GE + E
Sbjct: 78 KYLACNSDEGEPGTFKDRDILRYNPHSVIEGMTIAAYAMGCERGYNYIHGEIFEIYERFE 137
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EA AGLLG+ GS + F++ H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 138 EALAEAREAGLLGQKILGSDFSFELFAHHGYGAYICGEETALLESIEGKKGQPRFKPPFP 197
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+ G + F + G+ NN GTKLF +SGHVN+P E
Sbjct: 198 ASYGLYGKPTTINNTETFASVPFIINMGGESFLNLGKPNNGGTKLFSISGHVNRPGNYEI 257
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P EL++ GG+RGG L AVIPGGSS P+LP + D MDYD++ S LG
Sbjct: 258 GMGTPFAELLEM-AGGMRGG-GKLKAVIPGGSSSPVLPAAVMMDCTMDYDSIAKAGSMLG 315
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++T +V A+ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + +++D
Sbjct: 316 SGAVIVMDETTCMVKALERLSYFYFEESCGQCTPCREGTGWLYRVVHRIENGLGRRDDLD 375
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+L VT I G TICALGDAA+ PVQ I+HF E E I+
Sbjct: 376 LLNSVTGNIMGRTICALGDAASMPVQSFIKHFGSEFEYHIEN 417
>gi|114330930|ref|YP_747152.1| NADH-quinone oxidoreductase subunit F [Nitrosomonas eutropha C91]
gi|114307944|gb|ABI59187.1| NADH dehydrogenase subunit F [Nitrosomonas eutropha C91]
Length = 425
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/405 (52%), Positives = 276/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
LK +KR + K ++ + + ++ EVKKS LRGRGGAGFP+GLKWSFMPK G
Sbjct: 22 LKSYLKRDGYVALKKILSQKIPPEVVIEEVKKSALRGRGGAGFPTGLKWSFMPKQYTGE- 80
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+IMR++PH L+EG LIA M Y Y+ GE + + +E
Sbjct: 81 KYLVCNSDEGEPGTFKDRDIMRYNPHVLIEGMLIAAYAMGIRTGYNYVHGEIWDVYERME 140
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG+N SG+ F ++ H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 141 EAVEEANAAGFLGENILDSGFVFQLYNHHGYGAYICGEETALLESIEGKKGQPRFKPPFP 200
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
AN GLYG PTT+ N ET A P I+R G + + G+ NN GTK+F VSGHVNKP E
Sbjct: 201 ANFGLYGKPTTINNTETFASVPWIMRNGGESYLQLGKPNNGGTKIFSVSGHVNKPGNYEV 260
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P +L++ GG+RGG L IPGGSS+P+LP I + MDYD++ S LG
Sbjct: 261 PMGTPFSKLLEL-AGGMRGG-RKLKGCIPGGSSMPVLPGSIMMETDMDYDSIAKAGSMLG 318
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVI+MD +T +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R++ G ++E++D
Sbjct: 319 SGAVIIMDDTTCMVRALERLSYFYYEESCGQCTPCREGTGWLYRIINRIEHGKGRIEDLD 378
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L + I+G TICALGDAAA PV+ ++ HF E I EH +
Sbjct: 379 VLNNLADNIQGRTICALGDAAAMPVRAMLHHFWDEFVFHI-EHKK 422
>gi|358638063|dbj|BAL25360.1| NADH dehydrogenase I, chain F [Azoarcus sp. KH32C]
Length = 437
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/402 (51%), Positives = 270/402 (67%), Gaps = 5/402 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ + RG + + ++ + + I+ E+K S LRGRGGAGFP+GLKWSFMP+ G
Sbjct: 19 LQDYVARGGYSALRKIIDEKIAPEAIIAELKASSLRGRGGAGFPTGLKWSFMPRSFPG-A 77
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YL N+DE EPGT KDR+I+R++PH ++EG IA M Y YI GE + E
Sbjct: 78 KYLCCNSDEGEPGTFKDRDILRYNPHTVIEGMTIAAYAMGCERGYNYIHGEIFEVYQRFE 137
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EA AGLLGKN GS + FD+ H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 138 EALAEAREAGLLGKNILGSEFSFDLFAHHGYGAYICGEETALLESIEGKKGQPRFKPPFP 197
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+ G + F + G+ NN GTKLF VSGHVN+P E
Sbjct: 198 ASYGLYGKPTTINNTETFASVPFIVNMGGEGFLNLGKPNNGGTKLFSVSGHVNRPGNYEV 257
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P EL++ GG+RGG L AVIPGGSS P++P + D MDYD++ S LG
Sbjct: 258 AMGTPFAELLEM-AGGMRGG-RKLKAVIPGGSSAPVVPGSVMMDCTMDYDSISKAGSMLG 315
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++T +V A+ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + +++D
Sbjct: 316 SGAVIVMDETTCMVKALERLSYFYFEESCGQCTPCREGTGWLYRVVHRIENGLGRSDDLD 375
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+L VT I G TICALGDAA+ PVQ ++HF E + I+
Sbjct: 376 LLNSVTGNIMGRTICALGDAASMPVQSFVKHFGDEFQYHIEN 417
>gi|347538444|ref|YP_004845868.1| NADH dehydrogenase (ubiquinone) subunit F [Pseudogulbenkiania sp.
NH8B]
gi|345641621|dbj|BAK75454.1| NADH dehydrogenase (ubiquinone), F subunit [Pseudogulbenkiania sp.
NH8B]
Length = 431
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/380 (52%), Positives = 256/380 (67%), Gaps = 4/380 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+R +P
Sbjct: 48 VIAEVKNSGLRGRGGAGFPTGLKWSFMPRSFPGD-KYVVCNTDEGEPGTFKDRDILRFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A Y YI GE E + E A +EA AG LG+N G+ + F++
Sbjct: 107 HALIEGMIIAGYAMGTKAGYNYIHGEVFAEYQRFEEALEEARKAGFLGQNILGTDFSFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N E+ A P I+
Sbjct: 167 YAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTESFASVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G F G+ NN GTKLF VSGHVN+P E + P L++ GG+R G L
Sbjct: 227 RDGAQKFLEAGKPNNGGTKLFSVSGHVNRPGNYEIPLGTPFSTLLEM-AGGMRDG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ AVIVM++ ++ A+ RL+YFY
Sbjct: 285 AVIPGGSSAPILPAEIMMSCTMDYDSISKAGSMLGSGAVIVMNEDVCMIKALERLAYFYH 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R+ G + ++++L V + G TICAL DAA +PV
Sbjct: 345 EESCGQCTPCREGTGWLYRVIHRIANGEGRPGDLELLDSVGNNMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHAE 478
+ +HFR E E I EH +
Sbjct: 405 RSFTKHFRHEFEYAI-EHGK 423
>gi|319638821|ref|ZP_07993579.1| NADH dehydrogenase subunit I F [Neisseria mucosa C102]
gi|317399725|gb|EFV80388.1| NADH dehydrogenase subunit I F [Neisseria mucosa C102]
Length = 431
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 267/400 (66%), Gaps = 6/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGADW--IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + +++EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILSENISQSDVIDEVKASGLRGRGGAGFPTGLKWSFMPRSFPGE-KYVV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E A
Sbjct: 86 CNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALA 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
+A AAG LGKN GS ++F++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 QARAAGFLGKNILGSDFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET + P I+R G FA G N GTKLFC+SGHV +P E +
Sbjct: 206 LYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P E++ + GG+RGG L AVIPGGSS P+LP I MDYD++ S LG+ A+
Sbjct: 266 PFAEVL-KMAGGMRGG-KKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAI 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++D+L
Sbjct: 324 IVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDS 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V Q+ G TICAL DAA +PV+ +HFR E I EH
Sbjct: 384 VGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYI-EHG 422
>gi|149280565|ref|ZP_01886681.1| NADH dehydrogenase I chain F [Pedobacter sp. BAL39]
gi|149228680|gb|EDM34083.1| NADH dehydrogenase I chain F [Pedobacter sp. BAL39]
Length = 453
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/391 (51%), Positives = 269/391 (68%), Gaps = 14/391 (3%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D +V EVKKSGLRGRGGAGFP+G+KWSF+ K +G P YLV NADESEPGT KDR +M H
Sbjct: 40 DEVVEEVKKSGLRGRGGAGFPTGMKWSFLAK-PEGVPRYLVCNADESEPGTFKDRYLMTH 98
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
PH L+EG +++ + A+ +YIY+RGE + + + LERA EA AG LGKN G+GYD
Sbjct: 99 IPHALIEGMIVSSFALGANTSYIYVRGEMMPQIRILERAIAEAKQAGFLGKNILGTGYDL 158
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
++++ G GAYICGEETALLESLEGK+G PR+KPPFPA AGLYGCPT V NVE++A +
Sbjct: 159 ELYVQPGGGAYICGEETALLESLEGKRGNPRIKPPFPAIAGLYGCPTVVNNVESIAATVP 218
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI--DRHCGGVRGGW 334
I+ G + +A G ++GTKL SG++ +P E E+ +P++E I D +CGG+ G
Sbjct: 219 IINDGGEEYAKIGIGRSTGTKLISASGNLVRPGVYEIELGLPVEEFIYSDEYCGGIANG- 277
Query: 335 DNLLAVIPGGSSVPLLPKHIC------DDVLMDYDALK----AVQSGLGTAAVIVMDKST 384
L A + GGSSVP+LP ++ D LM Y++L A + +G+ I D+
Sbjct: 278 KRLKATVAGGSSVPVLPANLTLKLANGDPRLMSYESLSEGGFATGTMMGSGGFIAFDEDQ 337
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
+V + FY HESCGQC+PCREGTGW+ ++ R++ G+ K+ +ID+L +V+K IEG
Sbjct: 338 CIVRNTWNFARFYHHESCGQCSPCREGTGWMEKVLHRIEYGHGKMSDIDLLVDVSKNIEG 397
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+TIC LGDAAAWPV IRHFR E E +KE
Sbjct: 398 NTICPLGDAAAWPVASAIRHFRDEFEWHVKE 428
>gi|374584324|ref|ZP_09657416.1| NADH dehydrogenase subunit F [Leptonema illini DSM 21528]
gi|373873185|gb|EHQ05179.1| NADH dehydrogenase subunit F [Leptonema illini DSM 21528]
Length = 424
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 271/399 (67%), Gaps = 3/399 (0%)
Query: 76 LKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSY 135
L+ A K G + + L ++ EVKKS L+GRGGAGFP+G+KWSF+P+ + G+P Y
Sbjct: 19 LEVARKHGAYSSLQKLFSMKPTDLIEEVKKSNLKGRGGAGFPTGMKWSFVPQ-NTGKPVY 77
Query: 136 LVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERA 195
L +NADESEPGT DR I+ +DPH L+EG + ++ AYIYIRGEY N+ K L A
Sbjct: 78 LCINADESEPGTFTDRYIIENDPHLLIEGIICGAWAIQCHTAYIYIRGEYANQFKMLNEA 137
Query: 196 RQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPAN 255
EA AAGL+GKN GSG+D ++ H GAGAYICGEET L+ESLEGK+G+PR+KPPFPA
Sbjct: 138 LAEARAAGLVGKNIMGSGFDLEIWTHRGAGAYICGEETGLIESLEGKKGQPRIKPPFPAV 197
Query: 256 AGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEM 315
GL+GCPT V NV+T+A P I+ G + FA+ G K+++G+ +F VSGH+N P E
Sbjct: 198 EGLFGCPTIVNNVKTLAHVPWIVHNGGEAFAAIGTKDSTGSNIFGVSGHINNPGYWELPF 257
Query: 316 SIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTA 375
+ + E I+++ GV+GG L A IPGGSS P+L +D+ + Y+++ A ++ LGT
Sbjct: 258 GMHVPEFIEKYAKGVKGG--KLKAFIPGGSSTPVLTAAETEDLYLTYESMMAHKTFLGTG 315
Query: 376 AVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDML 435
+I+M+ TD+V A+ L++FY ESCGQCTPCREGT W+ I++R+ G A E+DML
Sbjct: 316 GMIIMNDQTDMVKALKTLTHFYADESCGQCTPCREGTSWVDRILKRILAGEATTRELDML 375
Query: 436 QEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
E+ +EG TICAL A A PV+ + FRP+ E+ K
Sbjct: 376 VEIADNMEGRTICALAAACAMPVRSFVTKFRPDFEKYCK 414
>gi|347755247|ref|YP_004862811.1| NADH dehydrogenase subunit F [Candidatus Chloracidobacterium
thermophilum B]
gi|347587765|gb|AEP12295.1| NADH dehydrogenase subunit F [Candidatus Chloracidobacterium
thermophilum B]
Length = 424
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/376 (51%), Positives = 253/376 (67%), Gaps = 2/376 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVKKS LRGRGGAGFP+G+KW F+P V+ +P Y+V NADESEPGTCKDRE+M DP
Sbjct: 42 VIEEVKKSSLRGRGGAGFPTGMKWGFVP-VNSPKPKYVVCNADESEPGTCKDRELMEKDP 100
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG LIA + + +IYIRGEY LE+A EA G +GKN CG+ ++ ++
Sbjct: 101 HQLIEGLLIAAYALLSKQVFIYIRGEYWYLIAILEQAIAEAREHGFIGKNICGTSFECEI 160
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+H GAGAYICGEETALL SLEG +G PR+KPPFPA AGLYGCPT V NVET P I+
Sbjct: 161 VVHPGAGAYICGEETALLNSLEGYRGHPRIKPPFPAVAGLYGCPTVVNNVETFCAVPHII 220
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
G DW+ S G + + GTK+F VSGHVN+P E M PLK+LI+ CGG+RGG L
Sbjct: 221 VHGGDWYRSLGTEKSGGTKIFSVSGHVNRPGNYEVRMGYPLKQLIEEDCGGIRGG-RKLK 279
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVP++ + +DY+ + S LG+ VIVMD++TD+ L FY
Sbjct: 280 AVIPGGSSVPIMTAEEVEQATLDYEGMAKAGSLLGSGGVIVMDETTDIFMTTYNLIRFYN 339
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCG CTPCREGT WL + +++ G ++D ++ + IEG + C LGDAA WP+
Sbjct: 340 HESCGWCTPCREGTDWLLKLFKKIARGEGTTADLDTIRRLCPNIEGRSHCPLGDAAVWPI 399
Query: 459 QGLIRHFRPELERRIK 474
++ F + + +K
Sbjct: 400 TSAMKKFPEDFLKHVK 415
>gi|294669098|ref|ZP_06734184.1| NADH oxidoreductase, F subunit [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309090|gb|EFE50333.1| NADH oxidoreductase, F subunit [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 426
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/401 (52%), Positives = 269/401 (67%), Gaps = 6/401 (1%)
Query: 80 MKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + D ++ EVK SGLRGRGGAGFPSGLKWSFMP+ G Y+V
Sbjct: 20 VKRGGYTALRKILAEKTPQDDVIAEVKTSGLRGRGGAGFPSGLKWSFMPRSFPGE-KYIV 78
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+R +PH L+EG +I G M A A Y YI GE + E A
Sbjct: 79 CNTDEGEPGTFKDRDIIRFNPHALIEGMIIGGYAMGACAGYNYIHGEIFEGYQRFEAALA 138
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
EA AG LGKN GSG+DF++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 139 EAREAGFLGKNILGSGFDFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 198
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
L+G PTT+ N ET A P I+R G FA G N GTKLF VSGHV +P E +
Sbjct: 199 LFGKPTTINNTETFASVPFIIRDGGQTFADKGIPNAGGTKLFSVSGHVERPGNYEVPLGT 258
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P +L+ GGVRGG L AVIPGGSS P++P + + MDYDA+ S LG+ AV
Sbjct: 259 PFADLLSM-AGGVRGG-KKLKAVIPGGSSSPVIPGDMMMTLTMDYDAISKAGSMLGSGAV 316
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++++L+
Sbjct: 317 IVMDEDVCMVKALERLSYFYFEESCGQCTPCREGTGWLYRIIHRIVNGQGRMEDLELLES 376
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+ + G TICAL DAA +PV+G ++H+R E I EH +
Sbjct: 377 IGNNMAGRTICALADAAVFPVRGFMKHYRDEFVHYI-EHGK 416
>gi|218460342|ref|ZP_03500433.1| NADH dehydrogenase I subunit F [Rhizobium etli Kim 5]
Length = 263
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/263 (72%), Positives = 220/263 (83%), Gaps = 1/263 (0%)
Query: 58 LKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFP 117
L+D+DRIFTN+YG+ D LKGAM RG W TK ++ KG DWI+NE+K SGLRGRGGAGFP
Sbjct: 2 LQDKDRIFTNIYGLKDKSLKGAMSRGHWDGTKQILEKGRDWIINEMKASGLRGRGGAGFP 61
Query: 118 SGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAA 177
+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A+AA
Sbjct: 62 TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGANAA 121
Query: 178 YIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLE 237
YIY+RGEY+ ER+ L+ A E Y GLLGKN G+D D+ +H+GAGAYICGEETALLE
Sbjct: 122 YIYVRGEYIREREALQAAIDECYDYGLLGKNN-KLGWDMDIFVHHGAGAYICGEETALLE 180
Query: 238 SLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTK 297
SLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG WF+S GR NN GTK
Sbjct: 181 SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGAGWFSSIGRPNNVGTK 240
Query: 298 LFCVSGHVNKPCTVEEEMSIPLK 320
LF +SGHVNKPCTVEEEM I +
Sbjct: 241 LFMLSGHVNKPCTVEEEMGITFR 263
>gi|225024119|ref|ZP_03713311.1| hypothetical protein EIKCOROL_00987 [Eikenella corrodens ATCC
23834]
gi|224943144|gb|EEG24353.1| hypothetical protein EIKCOROL_00987 [Eikenella corrodens ATCC
23834]
Length = 431
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/401 (52%), Positives = 269/401 (67%), Gaps = 6/401 (1%)
Query: 80 MKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ + D ++ EVK SGLRGRGGAGFPSGLKWSFMP+ G Y+V
Sbjct: 27 VKRGGYTALRKILAEKTPQDDVIAEVKTSGLRGRGGAGFPSGLKWSFMPRSFPGE-KYIV 85
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N DE EPGT KDR+I+R +PH L+EG +I G M A A Y YI GE + E A
Sbjct: 86 CNTDEGEPGTFKDRDIIRFNPHALIEGMIIGGYAMGACAGYNYIHGEIFEGYQRFEAALA 145
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
EA AG LGKN GSG+DF++ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 146 EAREAGFLGKNILGSGFDFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 205
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
L+G PTT+ N ET A P I+R G FA G N GTKLF VSGHV +P E +
Sbjct: 206 LFGKPTTINNTETFASVPFIIRDGGQTFADKGIPNAGGTKLFSVSGHVERPGNYEVPLGT 265
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P +L+ GGVRGG L AVIPGGSS P++P + + MDYDA+ S LG+ AV
Sbjct: 266 PFADLL-AMAGGVRGG-KKLKAVIPGGSSSPVIPGDMMMTLTMDYDAIAKAGSMLGSGAV 323
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G ++E++++L+
Sbjct: 324 IVMDEDVCMVKALERLSYFYFEESCGQCTPCREGTGWLYRIVHRIVNGQGRMEDLELLES 383
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+ + G TICAL DAA +PV+G ++H+R E I EH +
Sbjct: 384 IGNNMAGRTICALADAAVFPVRGFMKHYRDEFVHYI-EHGK 423
>gi|374855111|dbj|BAL57976.1| NADH dehydrogenase I subunit F [uncultured prokaryote]
Length = 428
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/421 (49%), Positives = 273/421 (64%), Gaps = 4/421 (0%)
Query: 64 IFTNLYGMHDPFLKGAMKR-GDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKW 122
+ T + + D F K G + K + + I+ EVKK+ LRGRGGAGFP+G+KW
Sbjct: 4 LLTKRFSIPDAFRIDVYKETGGYQSLKKALQMRPEEIIEEVKKANLRGRGGAGFPAGVKW 63
Query: 123 SFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIR 182
F+PK P YL +NADE EPGT KDR IM DPH L+EG +I+ + A+ A++Y+R
Sbjct: 64 GFLPK-ERKTPVYLCINADEGEPGTFKDRYIMLKDPHLLIEGIVISSYAIGANKAFVYVR 122
Query: 183 GEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGK 242
GE+V+ + L RA EAY G+LG+ GS + DV IH GAGAYICGEETAL+ESLEGK
Sbjct: 123 GEFVDCIEVLGRAIDEAYREGILGERVLGSNFSLDVIIHRGAGAYICGEETALIESLEGK 182
Query: 243 QGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVS 302
GKPRLKPPFPA GLY CPT V NVET+A P I+ +G +WFA+ G + N GTKL+ VS
Sbjct: 183 TGKPRLKPPFPAQKGLYQCPTIVNNVETIACVPYIVEKGGEWFANLGTEKNGGTKLYAVS 242
Query: 303 GHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDY 362
GHV +P E M L+++I H GG+ L AVIPGGSS P+L DV MD+
Sbjct: 243 GHVKRPGVYELPMGTVLRQIIYEHAGGIINDL-KLKAVIPGGSSSPVLTADEI-DVKMDF 300
Query: 363 DALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERL 422
D+L + S LG+ AVIV+ ++ +V + L+ FY HESCGQCTPCR GT W+ I+ER+
Sbjct: 301 DSLARIGSMLGSGAVIVISEAACMVRTLYILARFYAHESCGQCTPCRHGTSWMKKIIERI 360
Query: 423 KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELL 482
+ G + E++D+L +V I+G TIC LGDAA PV+ I+ FR E E I+ R L
Sbjct: 361 ENGRGRREDLDILLDVCDNIKGKTICPLGDAAVMPVESFIKKFRDEFEEHIELKGCRFSL 420
Query: 483 E 483
E
Sbjct: 421 E 421
>gi|319794663|ref|YP_004156303.1| NADH-quinone oxidoreductase subunit F [Variovorax paradoxus EPS]
gi|315597126|gb|ADU38192.1| NADH-quinone oxidoreductase, F subunit [Variovorax paradoxus EPS]
Length = 446
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/405 (52%), Positives = 269/405 (66%), Gaps = 5/405 (1%)
Query: 82 RGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 139
RG + + ++ +G D ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N
Sbjct: 45 RGGYKALRKILTEGLTPDQVIAEVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCN 103
Query: 140 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEA 199
+DE EPGTCKDR+I++ +PH ++EG IA M S Y YI GE E A +EA
Sbjct: 104 SDEGEPGTCKDRDILQFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFQSYDRFEEALEEA 163
Query: 200 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 259
AAG LG GS Y+F +H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLY
Sbjct: 164 RAAGYLGDKIMGSTYNFQLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLY 223
Query: 260 GCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 319
G PTT+ N ET A P I+ G + G+ NN GTK++ VSG V P E M P
Sbjct: 224 GKPTTINNTETFAAVPWIINNGGPAYLECGKPNNGGTKIYSVSGDVELPGNYEVPMGTPF 283
Query: 320 KELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIV 379
+L++ CGGVR G L AVIPGGSS P+LP I MDYD++ S LG+ AVIV
Sbjct: 284 SKLLEL-CGGVRKG-RTLKAVIPGGSSSPVLPADIMMACTMDYDSIAKAGSMLGSGAVIV 341
Query: 380 MDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVT 439
MD S +V+++ RLSYFY HESCGQCTPCREGTGWL+ +++R+ G + ++D+L V
Sbjct: 342 MDDSRSMVESLKRLSYFYMHESCGQCTPCREGTGWLYRVVDRIHNGQGRATDMDLLNSVA 401
Query: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAERELLEA 484
I+G TICALGDAAA PV+ +I+HFR E E I + + ++A
Sbjct: 402 DNIQGRTICALGDAAAMPVRAMIKHFRHEFEALIPGYVPKAPVQA 446
>gi|330826547|ref|YP_004389850.1| NADH-quinone oxidoreductase subunit F [Alicycliphilus denitrificans
K601]
gi|329311919|gb|AEB86334.1| NADH-quinone oxidoreductase, F subunit [Alicycliphilus
denitrificans K601]
Length = 449
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/373 (55%), Positives = 260/373 (69%), Gaps = 3/373 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ +LV N+DE EPGTCKDR+I+ +
Sbjct: 67 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRQFPGQ-KHLVCNSDEGEPGTCKDRDILMY 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG N S + F
Sbjct: 126 NPHIVIEGMIIAAYAMGISLGYNYIHGEIFQVYERFEAALEEARAAGYLGSNIMDSDFSF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 186 QLHAHHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG V +P E + P +L++ GGVR G
Sbjct: 246 IIRNGGQAYLECGKPNNGGTKIFSVSGDVERPGNYEIPLGTPFAKLLEL-AGGVRKG-RQ 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD S D+V+++ RLSYF
Sbjct: 304 LKAVIPGGSSAPVLPASIMMECTMDYDSIAKAGSMLGSGAVIVMDDSRDMVESLMRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGWLW ++ R++ G ++E+I++L V I G TICALGDAAA
Sbjct: 364 YMHESCGQCTPCREGTGWLWRVVHRIQHGQGRVEDIEVLDSVAFNIMGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPEL 469
PV+ +I+HFR E
Sbjct: 424 PVRAMIKHFRHEF 436
>gi|300691030|ref|YP_003752025.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum
PSI07]
gi|299078090|emb|CBJ50733.1| NADH-quinone oxidoreductase subunit F [Ralstonia solanacearum
PSI07]
gi|344169641|emb|CCA82000.1| NADH-quinone oxidoreductase subunit F [blood disease bacterium
R229]
Length = 431
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 279/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + I+ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKISPEQIIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R++PH L+EG I G M + Y YI GE + K E
Sbjct: 83 KYLVCNSDEGEPGTFKDRDILRYNPHALIEGMAIGGYAMGITVGYNYIHGEIWDVYKRFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAGLLG N GSG++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGLLGDNILGSGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GPD + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLSIGPDNYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG + AVIPGGSS P++P + MDYD + S LG
Sbjct: 263 PLGTPFSKLLEL-AGGMRGG-KKIKAVIPGGSSAPVVPGDVMMQTDMDYDGIAKTGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRVVDRIEHGKGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV-EHKQ 424
>gi|113867075|ref|YP_725564.1| NADH dehydrogenase chain F [Ralstonia eutropha H16]
gi|113525851|emb|CAJ92196.1| NADH dehydrogenase chain F [Ralstonia eutropha H16]
Length = 431
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 278/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKIPPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRTFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHSLIEGMAIGAYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N GSG+DF +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGSGFDFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GP+ + G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAVGPENYLKLGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG + AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFAKLLEL-AGGMRGG-KRIKAVIPGGSSAPVVPGDLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGTGWLYRMVNRIEHGEGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWKEFEYHV-EHKQ 424
>gi|339325142|ref|YP_004684835.1| NADH-quinone oxidoreductase subunit F [Cupriavidus necator N-1]
gi|338165299|gb|AEI76354.1| NADH-quinone oxidoreductase subunit F [Cupriavidus necator N-1]
Length = 431
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 278/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKIPPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRTFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHSLIEGMAIGAYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N GSG+DF +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGSGFDFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GP+ + G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAVGPENYLKLGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG + AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFAKLLEL-AGGMRGG-KRIKAVIPGGSSAPVVPGDLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGTGWLYRMVNRIEHGEGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWKEFEYHV-EHKQ 424
>gi|226939461|ref|YP_002794534.1| NuoF [Laribacter hongkongensis HLHK9]
gi|226714387|gb|ACO73525.1| NuoF [Laribacter hongkongensis HLHK9]
Length = 431
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/401 (51%), Positives = 261/401 (65%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L +KRG + K ++ + ++ EVK S LRGRGGAGFP+GLKWSFMP+ G
Sbjct: 23 LDAYVKRGGYQALKKIIGNKIPQEDVIAEVKGSNLRGRGGAGFPTGLKWSFMPRSFPGD- 81
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I R +PH L+EG +IA M Y YI GE E + E
Sbjct: 82 KYLVCNTDEGEPGTFKDRDIHRFNPHALIEGMIIAAYAMGVKRGYNYIHGEIFEEYQRFE 141
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EA AGLLG + S + FD+ H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 142 EALDEARRAGLLGNSILDSEFSFDLFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 201
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N E+ A P I+R G F G+ NN GTKLF VSGHVN+P E
Sbjct: 202 ASFGLYGKPTTINNTESFASVPFIIRDGGQSFLEKGKPNNGGTKLFSVSGHVNRPGNFEV 261
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P EL++ GG++ G L AVIPGGSS P+LP I D MDYD++ S LG
Sbjct: 262 PLGTPFAELLEM-AGGMKDG-KKLKAVIPGGSSAPVLPADIMMDCTMDYDSIAKAGSMLG 319
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVM++ +V A+ RL+YFY ESCGQCTPCREGTGWL+ I+ R++ G + E++D
Sbjct: 320 SGAVIVMNEDVCMVKALERLAYFYHEESCGQCTPCREGTGWLYRIIHRIEHGEGRPEDLD 379
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L V + G TICAL DAA +PV+ +HFR E E I+
Sbjct: 380 LLASVGNNMAGRTICALADAAVFPVRSFTKHFRNEFEYHIE 420
>gi|224824818|ref|ZP_03697925.1| NADH-quinone oxidoreductase, F subunit [Pseudogulbenkiania
ferrooxidans 2002]
gi|224603311|gb|EEG09487.1| NADH-quinone oxidoreductase, F subunit [Pseudogulbenkiania
ferrooxidans 2002]
Length = 431
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/380 (52%), Positives = 256/380 (67%), Gaps = 4/380 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ EVK SGLRGRGGAGFP+GLKWSFMP+ G Y+V N DE EPGT KDR+I+R +P
Sbjct: 48 VIAEVKNSGLRGRGGAGFPTGLKWSFMPRSFPGD-KYVVCNTDEGEPGTFKDRDILRFNP 106
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H L+EG +IAG M A Y YI GE E + E A +EA AG LG++ G+ + F++
Sbjct: 107 HALIEGMIIAGYAMGTKAGYNYIHGEVFAEYQRFEEALEEARKAGFLGQHILGTDFSFEL 166
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N E+ A P I+
Sbjct: 167 YAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTESFASVPFII 226
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
R G F G+ NN GTKLF VSGHVN+P E + P L++ GG+R G L
Sbjct: 227 RDGAQKFLEAGKPNNGGTKLFSVSGHVNRPGNYEIPLGTPFSTLLEM-AGGMRDG-KKLK 284
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I MDYD++ S LG+ AVIVM++ ++ A+ RL+YFY
Sbjct: 285 AVIPGGSSAPILPAEIMMSCTMDYDSISKAGSMLGSGAVIVMNEDVCMIKALERLAYFYH 344
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R+ G + ++++L V + G TICAL DAA +PV
Sbjct: 345 EESCGQCTPCREGTGWLYRVIHRIANGEGRPGDLELLDSVGNNMAGRTICALADAAVFPV 404
Query: 459 QGLIRHFRPELERRIKEHAE 478
+ +HFR E E I EH +
Sbjct: 405 RSFTKHFRHEFEYAI-EHGK 423
>gi|319761767|ref|YP_004125704.1| NADH-quinone oxidoreductase, f subunit [Alicycliphilus
denitrificans BC]
gi|317116328|gb|ADU98816.1| NADH-quinone oxidoreductase, F subunit [Alicycliphilus
denitrificans BC]
Length = 449
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/373 (55%), Positives = 259/373 (69%), Gaps = 3/373 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ VK+SGLRGRGGAGFP+GLKWSFMP+ R +LV N+DE EPGTCKDR+I+ +
Sbjct: 67 DQVIATVKESGLRGRGGAGFPTGLKWSFMPRQFP-RQKHLVCNSDEGEPGTCKDRDILMY 125
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG N S + F
Sbjct: 126 NPHIVIEGMIIAAYAMGISLGYNYIHGEIFQVYERFEAALEEARAAGYLGSNIMDSDFSF 185
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H H+G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 186 QLHAHHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 245
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F VSG V +P E + P +L++ GGVR G
Sbjct: 246 IIRNGGQAYLECGKPNNGGTKIFSVSGDVERPGNYEIPLGTPFAKLLEL-AGGVRKG-RQ 303
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD S D+V+++ RLSYF
Sbjct: 304 LKAVIPGGSSAPVLPASIMMECTMDYDSIAKAGSMLGSGAVIVMDDSRDMVESLMRLSYF 363
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREGTGWLW ++ R++ G ++E+I++L V I G TICALGDAAA
Sbjct: 364 YMHESCGQCTPCREGTGWLWRVVHRIQHGQGRVEDIEVLDSVAFNIMGRTICALGDAAAM 423
Query: 457 PVQGLIRHFRPEL 469
PV+ +I+HFR E
Sbjct: 424 PVRAMIKHFRHEF 436
>gi|444921317|ref|ZP_21241154.1| NADH-quinone oxidoreductase subunit F [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507676|gb|ELV07851.1| NADH-quinone oxidoreductase subunit F [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 427
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/389 (54%), Positives = 266/389 (68%), Gaps = 7/389 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ VK SGLRGRGGAGFP+G+KWSFMPK +G Y+V N+DESEPGTCKDR+I+R +P
Sbjct: 43 VIEMVKASGLRGRGGAGFPTGVKWSFMPK-GEGITRYVVCNSDESEPGTCKDRDILRFNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERK-NLERARQEAYAAGLLGKNACGSGYDFD 217
H L+EG IA M A AY Y+RGE+++E + A EAYAAGLLG+N +G D
Sbjct: 102 HALVEGMAIASYAMGARHAYNYMRGEFLDEPAIRFQGALDEAYAAGLLGENIKSTGISVD 161
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H GAGAYICGEETALLESLEGK+G+PR KPPFPA GLYG PTT+ N E+++ I
Sbjct: 162 IHPAIGAGAYICGEETALLESLEGKKGQPRFKPPFPAAVGLYGQPTTINNTESLSSVGRI 221
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+R GP+WFA+ G G KLF VSGH+ KP E + P EL+D CGGV G L
Sbjct: 222 IRNGPEWFANLGIPGAGGQKLFAVSGHIEKPGNYEIALGTPFSELLDL-CGGVWKG-RQL 279
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDAL-KAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
AVIPGGSSVP++P + MDYD++ K S LG+ AVIVMD++TD+V A+ LS F
Sbjct: 280 KAVIPGGSSVPVVPGDLMMQANMDYDSIAKVTGSMLGSGAVIVMDETTDMVKALRCLSRF 339
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y ESCGQCTPCREGTGWL+ +++R+ G E+++ L+ + I G TICALGDAAA
Sbjct: 340 YFSESCGQCTPCREGTGWLYRVVDRILQGKGVPEDLERLEHIANNIGGRTICALGDAAAM 399
Query: 457 PVQGLIRHFRPELERRIKEHAERELLEAT 485
PV I+HF E I EH R ++E
Sbjct: 400 PVLSFIKHFGHEFAYYI-EHG-RSMVEGA 426
>gi|89900291|ref|YP_522762.1| NADH-quinone oxidoreductase subunit F [Rhodoferax ferrireducens
T118]
gi|89345028|gb|ABD69231.1| NADH-quinone oxidoreductase, F subunit [Rhodoferax ferrireducens
T118]
Length = 458
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/438 (49%), Positives = 283/438 (64%), Gaps = 18/438 (4%)
Query: 52 KTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLKGA--------------D 97
+T F G +I+ +L G + LK RG + + ++ K + D
Sbjct: 16 QTCFHGRHINPQIYADLNG-SNWHLKDYESRGGYQALRKILAKNSGVTADDVTASGMTPD 74
Query: 98 WIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHD 157
++ VK+SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDREI++ +
Sbjct: 75 QVIAVVKESGLRGRGGAGFPTGLKWSFMPRQYAGQ-KYLVCNSDEGEPGTCKDREILQFN 133
Query: 158 PHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFD 217
PH ++EG +IA M + Y YI GE E A +EA AAGLLG N GS + F
Sbjct: 134 PHMVIEGMIIAAYAMGIAVGYNYIHGEIFKTYLRFEEAIEEARAAGLLGNNILGSDFSFQ 193
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H +G GAYICGEET+LLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P I
Sbjct: 194 LHAAHGYGAYICGEETSLLESLEGKKGQPRYKPPFPASFGLYGKPTTINNTETFAAVPWI 253
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+R G + + G+ N+ GTK+F +SG V P E M P +L++ GGVR G L
Sbjct: 254 IRNGGQAYLACGKPNSGGTKIFSISGDVELPGNYEVPMGTPFSQLLEL-AGGVRSG-RQL 311
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSS P+LP I D MDYD++ S LG+ AVIV+D S +V ++ RLSYFY
Sbjct: 312 KAVIPGGSSSPVLPGSIMMDCTMDYDSIAKAGSMLGSGAVIVLDDSRCMVKSLQRLSYFY 371
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
HESCGQCTPCREGTGWL +++R++ G+ + ++D+L V + I G TICALGDAAA P
Sbjct: 372 MHESCGQCTPCREGTGWLSRVVDRIENGHGHVTDLDLLDNVAENIMGRTICALGDAAAMP 431
Query: 458 VQGLIRHFRPELERRIKE 475
V+ +I+HFRPE E ++
Sbjct: 432 VRAMIKHFRPEFEYHVEH 449
>gi|170696394|ref|ZP_02887523.1| NADH-quinone oxidoreductase, F subunit [Burkholderia graminis
C4D1M]
gi|170138722|gb|EDT06921.1| NADH-quinone oxidoreductase, F subunit [Burkholderia graminis
C4D1M]
Length = 442
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 274/424 (64%), Gaps = 19/424 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHSLIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE K E A EA AG LG+N GSG+ F++H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIWEVYKRFEEALDEARRAGFLGENIMGSGFSFELHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F +SG V +P E + P L+D GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSISGDVERPGNYEVPLGTPFATLMDL-AGGMRGG-RKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVHRIEHGLGRPEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRI 473
E +
Sbjct: 417 EYHV 420
>gi|195119866|ref|XP_002004450.1| GI19938 [Drosophila mojavensis]
gi|193909518|gb|EDW08385.1| GI19938 [Drosophila mojavensis]
Length = 470
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/444 (47%), Positives = 266/444 (59%), Gaps = 21/444 (4%)
Query: 35 ASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLK 94
STA + P K+ FG L D DRIF NLYG HD L+GA KRGDWHRT DL+
Sbjct: 48 TSTADDSKVPEGMLSSTKSVFGPLVDCDRIFQNLYGRHDWRLQGARKRGDWHRTADLIKM 107
Query: 95 GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIM 154
G DWI+ E W ++ KV + L+VN E EPGTCKDREI+
Sbjct: 108 GPDWIMGE-------------------WEYLRKVQ-AKGKVLIVNCAEGEPGTCKDREIL 147
Query: 155 RHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGY 214
RH+PHK++EGCL+AG M +Y+R + NE NL+ A EAY GL+G N+C +G
Sbjct: 148 RHEPHKIIEGCLLAGCAMGCERCIVYVRNRFYNEACNLQLALAEAYCCGLIGCNSCETGV 207
Query: 215 DFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVS 274
D+ + G Y+ GEETAL+ L GK +PR +PPF G + P V N ET+AV
Sbjct: 208 KLDIIVQRG-DRYLTGEETALVNCLMGKLARPRRRPPFLHEQGYFDHPCVVVNTETLAVL 266
Query: 275 PTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGW 334
PT+LRRG WF S G N GTKLFC+SGHV PCTVEEEMS+PL+ +I+RH GGV GGW
Sbjct: 267 PTMLRRGAVWFTSLGSDKNFGTKLFCISGHVVNPCTVEEEMSMPLRNIIERHAGGVCGGW 326
Query: 335 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLS 394
DNLLA+ PGG S PL+ VLMD+D L A S LGTAA+IV+ K D + +
Sbjct: 327 DNLLALWPGGLSTPLMGAACAGQVLMDFDHLSAAGSELGTAAIIVISKDCDPLLVMQHSI 386
Query: 395 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 454
F+ ++C QCTPCR+G WL + G A + I+ + + K++E TIC L D+
Sbjct: 387 EFFMDQTCKQCTPCRDGAIWLPELFSNFVKGEAVPQMIEFVDIIRKKMENSTICGLCDSQ 446
Query: 455 AWPVQGLIRHFRPELERRIKEHAE 478
A LI+HFRP +E RI E+A
Sbjct: 447 ANLAGSLIQHFRPLIEARILEYAN 470
>gi|421746423|ref|ZP_16184218.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus necator
HPC(L)]
gi|409775036|gb|EKN56578.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus necator
HPC(L)]
Length = 431
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/405 (52%), Positives = 277/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKVPPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGAYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAGLLG N GSG+ F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGLLGDNILGSGFSFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GP+ + G+ NN GTK+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAVGPENYLKMGKPNNGGTKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+RGG L AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFATLLEL-AGGMRGG-KKLKAVIPGGSSAPVVPADLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGTGWLYRMVNRIEHGEGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWKEFEYHV-EHKQ 424
>gi|417749149|ref|ZP_12397555.1| NADH-quinone oxidoreductase, F subunit [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336459341|gb|EGO38284.1| NADH-quinone oxidoreductase, F subunit [Mycobacterium avium subsp.
paratuberculosis S397]
Length = 453
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/397 (52%), Positives = 272/397 (68%), Gaps = 8/397 (2%)
Query: 76 LKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDG---R 132
L+ +RG + K + D ++ VK SGLRGRGGAGF +G KWSF+P+ G +
Sbjct: 35 LQTYHRRGGYTAMKKALAMEPDAVIGMVKDSGLRGRGGAGFSTGTKWSFIPQGDTGAAAK 94
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVNADESEPGTCKD +M PH L+EG +IA +RA+ A+IY+RGE + + L
Sbjct: 95 PHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRANHAFIYVRGEVLPVLRRL 154
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAYAAG LG++ GSG+D ++ +H GAGAYICGEETALL+SLEG++G+PRL+PPF
Sbjct: 155 QNAVAEAYAAGYLGRDIDGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPF 214
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA AGLYGCPT + NVET+A P+I+ G DWF S G + + G L+ +SGHV +P E
Sbjct: 215 PAVAGLYGCPTVINNVETIASVPSIIGNGVDWFRSMGSEKSPGFTLYSLSGHVTRPGQYE 274
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP-KHICDDVLMDYDALKAVQSG 371
+ I L+EL+D + GGVR G L PGGSS PLL +H+ DV +DY+ + V S
Sbjct: 275 APLGITLRELLD-YAGGVRAG-HRLKFWTPGGSSTPLLTDEHL--DVPLDYEGVGGVGSM 330
Query: 372 LGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEE 431
LGT A+ + D++T VV A+ R +YFYKHESCG+CTPCREGT WL I ERL+ G E+
Sbjct: 331 LGTKALEIFDETTCVVRAVRRWTYFYKHESCGKCTPCREGTFWLDQIYERLETGKGTAED 390
Query: 432 IDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
ID L +++ I G + CALGD AA PV I++FR E
Sbjct: 391 IDKLLDISDTILGKSFCALGDGAASPVMSSIKYFRDE 427
>gi|307730335|ref|YP_003907559.1| NADH-quinone oxidoreductase subunit F [Burkholderia sp. CCGE1003]
gi|307584870|gb|ADN58268.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. CCGE1003]
Length = 442
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 275/424 (64%), Gaps = 19/424 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHSLIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE K E A EA AG LG+N GSG+ F++H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIWEVYKRFEEALDEARRAGFLGENIMGSGFSFELHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F +SG V +P E + P +L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSISGDVERPGNYEVPLGTPFAKLMEL-AGGMRGG-RKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVHRIEHGLGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRI 473
E +
Sbjct: 417 EYHV 420
>gi|124266601|ref|YP_001020605.1| NADH dehydrogenase (quinone) [Methylibium petroleiphilum PM1]
gi|124259376|gb|ABM94370.1| NADH dehydrogenase (quinone) [Methylibium petroleiphilum PM1]
Length = 448
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/379 (54%), Positives = 262/379 (69%), Gaps = 3/379 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGTCKDR+I+ +
Sbjct: 64 DQVIAEVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTCKDRDILAY 122
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH ++EG +IA M S Y YI GE + E A +EA AAG LG GS + F
Sbjct: 123 NPHIVIEGMIIAAYAMGISVGYNYIHGEIFEIYERFEEALEEARAAGYLGNAILGSAHSF 182
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
+H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ GLYG PTT+ N ET A P
Sbjct: 183 QLHAFHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPW 242
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+R G + G+ NN GTK+F + G V +P E + P L++ GGV+GG
Sbjct: 243 IIRNGGQAYLECGKPNNGGTKIFSMVGDVERPGNYEIPLGTPFSTLLEL-AGGVKGG-RG 300
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGGSS P+LP I + MDYD++ S LG+ AVIVMD + +V ++ RLSYF
Sbjct: 301 LKAVIPGGSSAPVLPASIMMNTTMDYDSIAKAGSMLGSGAVIVMDDTRCMVKSLLRLSYF 360
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y+HESCGQCTPCREGTGWLW +++R++ G+ ++E+ID+L V I+G TICALGDAAA
Sbjct: 361 YQHESCGQCTPCREGTGWLWRMVDRIERGHGRMEDIDLLNSVADNIQGRTICALGDAAAM 420
Query: 457 PVQGLIRHFRPELERRIKE 475
PV+ +I+HFR E I+
Sbjct: 421 PVRAMIKHFREEFVHHIEH 439
>gi|344171809|emb|CCA84431.1| NADH-quinone oxidoreductase subunit F [Ralstonia syzygii R24]
Length = 431
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/405 (51%), Positives = 278/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLK--GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + I+ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKISPEQIIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R++PH L+EG I G M + Y YI GE + K E
Sbjct: 83 KYLVCNSDEGEPGTFKDRDILRYNPHALIEGMAIGGYAMGITVGYNYIHGEIWDVYKRFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N GSG++F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGSGFNFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GPD + G+ NN G+K+F VSG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLSIGPDNYLKMGKPNNGGSKIFSVSGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG + AVIPGGSS P++P + MDYD + S LG
Sbjct: 263 PLGTPFSKLLEL-AGGMRGG-KKIKAVIPGGSSAPVVPGDVMMQTDMDYDGIAKTGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRVVDRIEHGKGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWDEFAYHV-EHKQ 424
>gi|332662318|ref|YP_004445106.1| NADH-quinone oxidoreductase subunit F [Haliscomenobacter hydrossis
DSM 1100]
gi|332331132|gb|AEE48233.1| NADH-quinone oxidoreductase, F subunit [Haliscomenobacter hydrossis
DSM 1100]
Length = 452
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/416 (49%), Positives = 275/416 (66%), Gaps = 15/416 (3%)
Query: 76 LKGAMKRGDWHRTKDLVLK-GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPS 134
++G +K G + + + K D + EVKKSGLRGRGGAGFP+G+KWSF+ K +D +P
Sbjct: 19 IEGYIKHGGYRAVEKALKKMQPDEVTEEVKKSGLRGRGGAGFPTGMKWSFIFKGND-KPR 77
Query: 135 YLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLER 194
YL+ NADESEPGT KDR +M PH L+EG + + + AYIYIRGEY+ L++
Sbjct: 78 YLLCNADESEPGTFKDRLLMEKIPHLLIEGMIASSFALGVKTAYIYIRGEYMYILHILQK 137
Query: 195 ARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPA 254
A EAYA G LG+N G+ Y D+H+H G GAYICGEETAL+ESLEGK+G PR+KPPFPA
Sbjct: 138 AIDEAYAKGYLGENILGTTYSLDLHVHPGGGAYICGEETALIESLEGKRGNPRIKPPFPA 197
Query: 255 NAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEE 314
GL+GCPT V NVET+ P I+ G + +A+ G ++GTKL G++NKP E E
Sbjct: 198 VEGLWGCPTIVNNVETICKVPFIINEGGETYANIGIGASTGTKLISACGNINKPGVYEIE 257
Query: 315 MSIPLKELI--DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDV------LMDYDALK 366
+ +P++E I D +CGG++GG L A++PGGSSVP+LP + LM Y++L
Sbjct: 258 LGVPVEEFIYSDEYCGGIKGG-KQLKALVPGGSSVPILPNRLITKTAKGEPRLMSYESLS 316
Query: 367 ----AVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERL 422
S LG+ IV D+ +V S FY HESCGQC+PCREGTGW+ I+ R+
Sbjct: 317 DGGFPTGSMLGSGGFIVFDEDQCIVRNTWNFSRFYHHESCGQCSPCREGTGWMEKILHRM 376
Query: 423 KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+ G+ ++E+ID+L +V ++IEG+TIC GDA+AWPV IRHFR E E + AE
Sbjct: 377 EYGHGRMEDIDLLWDVQRKIEGNTICPFGDASAWPVAAAIRHFRDEFEWHVLHPAE 432
>gi|186476759|ref|YP_001858229.1| NADH-quinone oxidoreductase subunit F [Burkholderia phymatum
STM815]
gi|184193218|gb|ACC71183.1| NADH-quinone oxidoreductase, F subunit [Burkholderia phymatum
STM815]
Length = 442
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 273/424 (64%), Gaps = 19/424 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGDNWH-LQDYVERGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A +EA AG LG N GSG+ F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALEEARTAGFLGDNIMGSGFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAVGPQNYLEMG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEIPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I MDYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDMDYDSIAKQGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVHRIEHGLGRKEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRI 473
E +
Sbjct: 417 EYHV 420
>gi|399020461|ref|ZP_10722591.1| NADH-quinone oxidoreductase, F subunit [Herbaspirillum sp. CF444]
gi|398094876|gb|EJL85230.1| NADH-quinone oxidoreductase, F subunit [Herbaspirillum sp. CF444]
Length = 431
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 273/401 (68%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L +KRG + K ++ + + ++ E+K SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LADYVKRGGYESLKRILSENITPEQVIAELKSSGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R++PH L+EG +I G M + Y YI GE + E
Sbjct: 83 KYLVCNSDEGEPGTFKDRDIIRYNPHALIEGMIIGGYAMGITVGYNYIHGEIFDAYLRFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N G+ + F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGTNFSFQLHGHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I + G +A G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFIFKIGAQAYADIGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+RGG + AVIPGGSS P++ + D MDYDA+ S LG
Sbjct: 263 PLGTPFSTLLEL-AGGMRGG-KKIKAVIPGGSSAPVIRGEVMMDTTMDYDAIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RL+YFY ESCGQCTPCREGTGW++ ++ER++ G+ KLE++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLAYFYYEESCGQCTPCREGTGWMYRMVERIENGHGKLEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L V I+G TICALGDAAA PV+ I+++R E E I+
Sbjct: 381 VLNSVADNIQGRTICALGDAAAMPVRAFIKNYREEFEYHIE 421
>gi|255533958|ref|YP_003094330.1| NADH-quinone oxidoreductase subunit F [Pedobacter heparinus DSM
2366]
gi|255346942|gb|ACU06268.1| NADH-quinone oxidoreductase, F subunit [Pedobacter heparinus DSM
2366]
Length = 454
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/391 (52%), Positives = 268/391 (68%), Gaps = 14/391 (3%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D +V EVKKSGLRGRGGAGFP+G+KWSF+ K DG P YLV NADESEPGT KDR +M H
Sbjct: 40 DDVVEEVKKSGLRGRGGAGFPTGMKWSFLAK-PDGVPRYLVCNADESEPGTFKDRYLMTH 98
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
PH L+EG +++ + A+ +YIY+RGE + + + LE+A EA AG LGKN GSGYD
Sbjct: 99 IPHALIEGMIVSSFALGANTSYIYVRGEMMPQIRILEKAIAEAKNAGFLGKNILGSGYDL 158
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
++++ G GAYICGEETALLESLEGK+G PR+KPPFPA AGLYGCPT V NVE++A
Sbjct: 159 ELYVQPGGGAYICGEETALLESLEGKRGNPRIKPPFPAIAGLYGCPTVVNNVESIAAVVP 218
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI--DRHCGGVRGGW 334
I+ G + +A G ++GTKL SG++ +P E E+ +P++E I D CGG+ G
Sbjct: 219 IVNDGGEEYAKIGIGRSTGTKLISASGNLVRPGVYEIELGLPVEEFIYSDEWCGGIANG- 277
Query: 335 DNLLAVIPGGSSVPLLPKHICDDV------LMDYDALK----AVQSGLGTAAVIVMDKST 384
L A + GGSSVP+LP ++ + LM Y++L A + +G+ I D+
Sbjct: 278 KRLKATVAGGSSVPVLPANLTLKLANGEPRLMSYESLSEGGFATGTMMGSGGFIAFDEDQ 337
Query: 385 DVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEG 444
+V S FY HESCGQC+PCREGTGW+ ++ RL+ G+ K+ +ID+L +V+K+IEG
Sbjct: 338 CIVRNTWNFSRFYHHESCGQCSPCREGTGWMEKVLHRLEYGHGKMSDIDLLVDVSKKIEG 397
Query: 445 HTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+TIC LGDAAAWPV IRHFR E E +KE
Sbjct: 398 NTICPLGDAAAWPVASAIRHFRDEFEWHVKE 428
>gi|325105662|ref|YP_004275316.1| NADH dehydrogenase subunit F [Pedobacter saltans DSM 12145]
gi|324974510|gb|ADY53494.1| NADH dehydrogenase subunit F [Pedobacter saltans DSM 12145]
Length = 454
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/399 (51%), Positives = 268/399 (67%), Gaps = 14/399 (3%)
Query: 89 KDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTC 148
K L D +V EVKKSGLRGRGGAGFP+G+KWSF+ K +G P YLV N DESEPGT
Sbjct: 32 KALKTMSPDDVVEEVKKSGLRGRGGAGFPTGMKWSFLAK-PEGVPRYLVCNGDESEPGTF 90
Query: 149 KDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKN 208
KDR +M H PH L+EG +++ + A+ +YIY+RGE + + + LE+A EA AG LGKN
Sbjct: 91 KDRFLMTHIPHALIEGMIVSSFALGANTSYIYVRGEMMPQIRILEKAIAEAKEAGYLGKN 150
Query: 209 ACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNV 268
GS +D ++++ G GAYICGEETALLESLEGK+G PR+KPPFPA AGLY CPT V NV
Sbjct: 151 ILGSDFDLELYVQPGGGAYICGEETALLESLEGKRGNPRIKPPFPAIAGLYNCPTVVNNV 210
Query: 269 ETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI--DRH 326
E++A + I+ G + +A G ++GTKL SG++NKP E E+ + +++ I D +
Sbjct: 211 ESIAATVPIINDGGEEYAKIGIGRSTGTKLISASGNINKPGVYEIELGVSVEDFIYSDEY 270
Query: 327 CGGVRGGWDNLLAVIPGGSSVPLLPKHIC------DDVLMDYDALK----AVQSGLGTAA 376
CGG+ G L AV+ GGSSVP+LP ++ D LM Y++L A + LG+
Sbjct: 271 CGGIANG-KRLKAVVAGGSSVPILPANLILNLVNGDKRLMTYESLSDGGFATGTMLGSGG 329
Query: 377 VIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQ 436
IVMD+ VV S FY HESCGQC+PCREGTGW+ I+ +++ G +ID+L
Sbjct: 330 FIVMDEDQCVVRNTWNFSRFYNHESCGQCSPCREGTGWMTKILHKIETGKGSYSDIDLLV 389
Query: 437 EVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+V+KQIEG+TIC LGDAAAWPV +RHFR E E I E
Sbjct: 390 DVSKQIEGNTICPLGDAAAWPVASAVRHFRDEFEWHINE 428
>gi|295676042|ref|YP_003604566.1| NADH-quinone oxidoreductase subunit F [Burkholderia sp. CCGE1002]
gi|295435885|gb|ADG15055.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. CCGE1002]
Length = 441
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 271/421 (64%), Gaps = 22/421 (5%)
Query: 71 MHD----PFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLRGRG 112
+HD P + + +WH +D V +G + ++ +VK SGLRGRG
Sbjct: 4 LHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIAPEQVIADVKASGLRGRG 62
Query: 113 GAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
GAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I M
Sbjct: 63 GAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHSLIEGMAIGAYAM 121
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
+ Y YI GE K E A +EA AG LG N GSG+ F +H H+G GAYICGEE
Sbjct: 122 GITVGYNYIHGEIWEVYKRFEEALEEARRAGFLGDNIMGSGFSFQLHAHHGYGAYICGEE 181
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
TALLES+EGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G+ N
Sbjct: 182 TALLESIEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIGKPN 241
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
N GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P++P
Sbjct: 242 NGGTKIFSVSGDVERPGNYEIPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPVIPG 299
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
+ MDYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGT
Sbjct: 300 DMMMQTDMDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCREGT 359
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
GWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E E
Sbjct: 360 GWLYRVVHRIEHGLGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEFEYH 419
Query: 473 I 473
+
Sbjct: 420 V 420
>gi|183981493|ref|YP_001849784.1| NADH dehydrogenase I subunit F [Mycobacterium marinum M]
gi|443489894|ref|YP_007368041.1| NADH dehydrogenase I [Mycobacterium liflandii 128FXT]
gi|183174819|gb|ACC39929.1| NADH dehydrogenase I (chain F) NuoF (NADH- ubiquinone
oxidoreductase chain F) [Mycobacterium marinum M]
gi|442582391|gb|AGC61534.1| NADH dehydrogenase I [Mycobacterium liflandii 128FXT]
Length = 448
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 274/400 (68%), Gaps = 9/400 (2%)
Query: 81 KRGDWHRTKDLVLK-GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDG---RPSYL 136
+R D +R + L G D ++ VK SGLRGRGGAGF +G KWSF+P+ G +P YL
Sbjct: 28 RRHDGYRALEKALAMGPDAVIGTVKDSGLRGRGGAGFSTGTKWSFIPQGDAGPAAKPHYL 87
Query: 137 VVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERAR 196
VVNADESEPGTCKD +M PH L+EG +IA +RAS A+IY+RGE + + L+ A
Sbjct: 88 VVNADESEPGTCKDIPLMLATPHVLVEGVIIAAYAIRASHAFIYVRGEVLPVLRRLQNAV 147
Query: 197 QEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANA 256
EAYAAGLLG+N GSG+D ++ +H GAGAYICGEETALL+SLEG++G+PRL+PPFPA A
Sbjct: 148 AEAYAAGLLGRNINGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVA 207
Query: 257 GLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMS 316
GLYGCPT + NVET+A P+I+ G DWF S G + + G L+ +SGHV +P E +
Sbjct: 208 GLYGCPTVINNVETIASVPSIILNGVDWFRSMGSEKSPGFTLYSLSGHVTRPGQYEAPLG 267
Query: 317 IPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP-KHICDDVLMDYDALKAVQSGLGTA 375
I L+EL+D + GG+R G L PGGSS PLL +H+ DV +DY+ + V S LGT
Sbjct: 268 ITLRELLD-YAGGIRAG-HQLKFWTPGGSSTPLLTDEHL--DVPLDYEGVGGVGSMLGTK 323
Query: 376 AVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDML 435
A+ + D++T VV A+ R + FYKHESCG+CTPCREGT WL I RL+ G E+ID L
Sbjct: 324 ALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKIYARLETGKGTREDIDKL 383
Query: 436 QEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+++ I G + CALGD AA PV I+HF+ E +++
Sbjct: 384 LDISDSILGKSFCALGDGAASPVMSSIKHFQDEYIAHVEQ 423
>gi|33597906|ref|NP_885549.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
parapertussis 12822]
gi|33574335|emb|CAE38671.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
parapertussis]
Length = 455
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/404 (52%), Positives = 269/404 (66%), Gaps = 5/404 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + ++ G + ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 48 LQEYVKRGGYEALRKILTTGMTPEDVIAEVKASGLRGRGGAGFPTGLKWSFMPRAFPGQ- 106
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R +PH ++EG +IA M S Y YI GE + E
Sbjct: 107 KYLVCNSDEGEPGTFKDRDILRFNPHIVIEGMVIAAYAMGISVGYNYIHGEIFEVYERFE 166
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG GS + F +H +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 167 EALEEARAAGFLGDKLLGSDFSFQLHAFHGYGAYICGEETALLESLEGKKGQPRFKPPFP 226
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G + G+ NN GTKLF +SG V +P E
Sbjct: 227 ASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLEVGKPNNGGTKLFSISGDVERPGNYEI 286
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P +L++ GG+RGG L AVIPGGSS P+LP I D MDYDA+ S LG
Sbjct: 287 PMGTPFSKLLEL-AGGMRGG-RKLKAVIPGGSSAPVLPADIMMDCTMDYDAIAKAGSMLG 344
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 345 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMVHRIENGQGRPEDLD 404
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
ML V I G TICALGDAAA PV+ I+HFR E I+ +
Sbjct: 405 MLDSVAGNIMGRTICALGDAAAMPVRSFIKHFRDEFAHHIEHKS 448
>gi|197124712|ref|YP_002136663.1| NADH-quinone oxidoreductase subunit F [Anaeromyxobacter sp. K]
gi|220919433|ref|YP_002494737.1| NADH-quinone oxidoreductase subunit F [Anaeromyxobacter
dehalogenans 2CP-1]
gi|196174561|gb|ACG75534.1| NADH-quinone oxidoreductase, F subunit [Anaeromyxobacter sp. K]
gi|219957287|gb|ACL67671.1| NADH-quinone oxidoreductase, F subunit [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 441
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/379 (54%), Positives = 265/379 (69%), Gaps = 5/379 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
IV+EVKKS LRGRGGAGF +GLKW+F+PK D RP YL VNADESEPGT KDR I+ HDP
Sbjct: 42 IVDEVKKSNLRGRGGAGFATGLKWTFLPK--DVRPRYLTVNADESEPGTFKDRYIIEHDP 99
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACG-SGYDFD 217
H L+EG + + AY+YIRGE+ + + LE+A QEA AG+LG G + D
Sbjct: 100 HMLIEGIALTCYALDIHLAYVYIRGEFAKQARILEQAIQEARDAGILGPRLLGKQDFPLD 159
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H+H GAGAYICGEE+ALLESLEGK+G PRLKPPFPA GL+G PT + NVET+A P I
Sbjct: 160 IHVHRGAGAYICGEESALLESLEGKKGYPRLKPPFPAVVGLWGKPTIINNVETIANVPWI 219
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+ G FA+ G + GT+LF VSGHVN+P E+ + LK+LI GG+ GG L
Sbjct: 220 VANGGAAFAALGVGKSGGTRLFGVSGHVNRPGVYEKPVHYNLKKLIMEDAGGIVGG-RKL 278
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSS P+L H D+ +++DA+KA S G+ VIV D+S +V A+AR++ FY
Sbjct: 279 KAVIPGGSSAPVLAAHEI-DISLEFDAVKAAGSMSGSGGVIVFDESVCLVRALARIAKFY 337
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGT W+ I+E+++ G+A +++ L++V I G+TICALGDAAA P
Sbjct: 338 AEESCGQCTPCREGTSWMEGILEKIEHGHATAADVEKLEQVAGNIAGNTICALGDAAAMP 397
Query: 458 VQGLIRHFRPELERRIKEH 476
VQ ++ F+PE R ++ H
Sbjct: 398 VQSFLKKFKPEFLRHVEAH 416
>gi|209518510|ref|ZP_03267331.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. H160]
gi|209501055|gb|EEA01090.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. H160]
Length = 442
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/421 (48%), Positives = 271/421 (64%), Gaps = 22/421 (5%)
Query: 71 MHD----PFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLRGRG 112
+HD P + + +WH +D V +G + ++ +VK SGLRGRG
Sbjct: 4 LHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIAPEQVIADVKASGLRGRG 62
Query: 113 GAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
GAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I M
Sbjct: 63 GAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHALIEGMAIGAYAM 121
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
+ Y YI GE K E A +EA AG LG N GSG+ F +H H+G GAYICGEE
Sbjct: 122 GITVGYNYIHGEIWEVYKRFEEALEEARRAGFLGDNIMGSGFSFQLHAHHGYGAYICGEE 181
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
TALLES+EGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G+ N
Sbjct: 182 TALLESIEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAVGPQNYLEIGKPN 241
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
N GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P++P
Sbjct: 242 NGGTKIFSVSGDVERPGNYEIPLGTPFATLMEL-AGGMRGG-RKIKAVIPGGSSAPVIPG 299
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
+ MDYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGT
Sbjct: 300 DMMMQTDMDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGT 359
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
GWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++HF E E
Sbjct: 360 GWLYRVVNRIEHGLGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHFWDEFEYH 419
Query: 473 I 473
+
Sbjct: 420 V 420
>gi|374365452|ref|ZP_09623542.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus basilensis
OR16]
gi|373103025|gb|EHP44056.1| NADH:ubiquinone oxidoreductase, chain F [Cupriavidus basilensis
OR16]
Length = 431
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/405 (51%), Positives = 277/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKITPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHSLIEGMAIGAYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N GSG+DF +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGSGFDFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GP+ + G+ NN G+K+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLSIGPENYLKMGKPNNGGSKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+RGG + AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFATLLEL-AGGMRGG-KRIKAVIPGGSSAPVVPGDMMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGTGWLYRMVNRIEHGEGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWKEFEYHV-EHKQ 424
>gi|86160615|ref|YP_467400.1| NADH-quinone oxidoreductase subunit F [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85777126|gb|ABC83963.1| NADH dehydrogenase subunit F [Anaeromyxobacter dehalogenans 2CP-C]
Length = 441
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/379 (54%), Positives = 265/379 (69%), Gaps = 5/379 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
IV+EVKKS LRGRGGAGF +GLKW+F+PK D RP YL VNADESEPGT KDR I+ HDP
Sbjct: 42 IVDEVKKSNLRGRGGAGFATGLKWTFLPK--DVRPRYLTVNADESEPGTFKDRYIIEHDP 99
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGS-GYDFD 217
H L+EG + + AY+YIRGE+ + + LE+A QEA AG+LG G + D
Sbjct: 100 HMLIEGIALTCYALDIHLAYVYIRGEFAKQARILEQAIQEARDAGILGPRLLGKKDFPLD 159
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
+H+H GAGAYICGEE+ALLESLEGK+G PRLKPPFPA GL+G PT + NVET+A P I
Sbjct: 160 IHVHRGAGAYICGEESALLESLEGKKGYPRLKPPFPAVVGLWGKPTIINNVETIANVPWI 219
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+ G FA+ G + GT+LF VSGHVN+P E+ + LK+LI GG+ GG L
Sbjct: 220 VANGGAAFAALGVGKSGGTRLFGVSGHVNRPGVYEKPVHYNLKKLIMEDAGGIVGG-RKL 278
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSS P+L H D+ +++DA+KA S G+ VIV D+S +V A+AR++ FY
Sbjct: 279 KAVIPGGSSAPVLAAHEI-DISLEFDAVKAAGSMSGSGGVIVFDESVCLVRALARIAKFY 337
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
ESCGQCTPCREGT W+ I+E+++ G+A +++ L++V I G+TICALGDAAA P
Sbjct: 338 AEESCGQCTPCREGTSWMEGILEKIEHGHATAADVEKLEQVAGNIAGNTICALGDAAAMP 397
Query: 458 VQGLIRHFRPELERRIKEH 476
VQ ++ F+PE R ++ H
Sbjct: 398 VQSFLKKFKPEFLRHVEAH 416
>gi|407712812|ref|YP_006833377.1| NADH-quinone oxidoreductase subunit F [Burkholderia phenoliruptrix
BR3459a]
gi|407234996|gb|AFT85195.1| NADH-quinone oxidoreductase subunit F [Burkholderia phenoliruptrix
BR3459a]
Length = 442
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 274/424 (64%), Gaps = 19/424 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHSLIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE K E A EA AG LG+N GSG+ F++H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIWEVYKRFEEALDEARRAGFLGENIMGSGFSFELHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F +SG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSISGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-RKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVHRIEHGLGRPEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRI 473
E +
Sbjct: 417 EYHV 420
>gi|319779203|ref|YP_004130116.1| NADH-ubiquinone oxidoreductase subunit F [Taylorella equigenitalis
MCE9]
gi|397661443|ref|YP_006502143.1| NADH dehydrogenase I, 51 kda subunit, chain F [Taylorella
equigenitalis ATCC 35865]
gi|317109227|gb|ADU91973.1| NADH-ubiquinone oxidoreductase chain F [Taylorella equigenitalis
MCE9]
gi|394349622|gb|AFN35536.1| NADH dehydrogenase I, 51 kda subunit, chain F [Taylorella
equigenitalis ATCC 35865]
gi|399114630|emb|CCG17424.1| NADH dehydrogenase I, 51 kda subunit, chain F [Taylorella
equigenitalis 14/56]
Length = 452
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/402 (51%), Positives = 269/402 (66%), Gaps = 5/402 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + K ++ G + I+ E+K SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 45 LEDYVKRGGYEAIKKILTTGLKQEDIIAELKASGLRGRGGAGFPTGLKWSFMPRAFPGQ- 103
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
Y+V N+DE EPGT KDR+I+R +PH ++EG +I G M + Y YI GE + +
Sbjct: 104 KYIVCNSDEGEPGTFKDRDILRFNPHCIIEGMIIGGFAMGVTRGYNYIHGEIFEVYERFQ 163
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EA AAG LG N G+ + FD+ H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 164 EAIHEARAAGYLGSNILGTDFCFDLEAHHGYGAYICGEETALLESIEGKKGQPRFKPPFP 223
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G + G NN GTKLF +SG V KP T E
Sbjct: 224 ASFGLYGKPTTINNAETFAAVPWIIRNGGPAYLEVGLPNNGGTKLFSISGDVEKPGTYEI 283
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+R G L AVIPGGSS P+LP I MDYD++ S LG
Sbjct: 284 PLGTPFSKLLEL-AGGMREGRP-LKAVIPGGSSSPVLPAEIMMQTNMDYDSISKAGSMLG 341
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVM+ + +V ++ RLS+FY+ ESCGQCTPCREGTGWL+ ++ R++ G+ KLE++D
Sbjct: 342 SGAVIVMNDTRCMVKSLLRLSHFYQDESCGQCTPCREGTGWLYRLVHRIEHGHGKLEDLD 401
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
L V I G TICALGDAAA PV+G ++H+R E I+
Sbjct: 402 QLDRVAGNIMGRTICALGDAAAMPVRGFLKHYRDEFIYHIEN 443
>gi|253998388|ref|YP_003050451.1| NADH-quinone oxidoreductase subunit F [Methylovorus glucosetrophus
SIP3-4]
gi|313200464|ref|YP_004039122.1| NADH-quinone oxidoreductase subunit F [Methylovorus sp. MP688]
gi|253985067|gb|ACT49924.1| NADH-quinone oxidoreductase, F subunit [Methylovorus glucosetrophus
SIP3-4]
gi|312439780|gb|ADQ83886.1| NADH-quinone oxidoreductase, F subunit [Methylovorus sp. MP688]
Length = 439
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 269/409 (65%), Gaps = 8/409 (1%)
Query: 70 GMHDPF-LKGAMKRGDWHRTKDLV---LKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFM 125
G DP L+ + G + + + LV +K D ++ +VK SGLRGRGGAGFP+GLKWSFM
Sbjct: 24 GQPDPASLQAYLNVGGYKQLQRLVQDKVKATD-VITQVKLSGLRGRGGAGFPTGLKWSFM 82
Query: 126 PKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEY 185
P+ DG YLV N DE EPGT KDR+I+R++PH+L+EG IA + A Y YI GE
Sbjct: 83 PRYYDGT-KYLVCNTDEGEPGTFKDRDIIRYNPHQLIEGMAIAAYTLGARVGYNYIHGEI 141
Query: 186 VNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGK 245
+ + ERA EA AAG +G+N G+ + FD+ +G GAYICGEETAL+ES+EGK+G+
Sbjct: 142 WQDYEIFERALDEARAAGFIGENLFGTTFSFDLFAVHGYGAYICGEETALIESIEGKKGQ 201
Query: 246 PRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHV 305
PR KPPFPA+ G++G PT V N E+ P IL G D F + G N+ GTKLF VSGHV
Sbjct: 202 PRFKPPFPASYGVFGKPTNVNNTESYTSIPWILEHGGDAFQALGVPNSGGTKLFSVSGHV 261
Query: 306 NKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDAL 365
+P E M +P EL+D GGV G L AVIPGG S ++P MDYD L
Sbjct: 262 ERPGNYEVRMGMPFTELLDI-AGGVWKG-RQLKAVIPGGPSTAVMPAAAIMGATMDYDGL 319
Query: 366 KAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVG 425
S LG ++IVMD++T +V + RLSYF+ ESCGQCTPCREGTGWL+ +++R+ G
Sbjct: 320 SKAGSSLGAGSMIVMDETTCMVKTLKRLSYFFYEESCGQCTPCREGTGWLYRVVKRIVEG 379
Query: 426 NAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
++ ++D+L +V+ I G TICALGDAAA PV I+HFRPE E I+
Sbjct: 380 EGRMGDLDLLTDVSSNISGRTICALGDAAATPVLSFIKHFRPEFEYYIQ 428
>gi|383451737|ref|YP_005358458.1| NADH dehydrogenase I subunit F [Flavobacterium indicum GPTSA100-9]
gi|380503359|emb|CCG54401.1| NADH dehydrogenase I, F subunit [Flavobacterium indicum GPTSA100-9]
Length = 454
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/392 (53%), Positives = 269/392 (68%), Gaps = 18/392 (4%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D I EVK SGLRGRGGAGFP G+KWSF+ K S G+P +LV NADESEPGT KDR +M +
Sbjct: 39 DEITEEVKTSGLRGRGGAGFPVGMKWSFIDKKS-GKPRHLVCNADESEPGTFKDRYLMEY 97
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
PH L+EG + + + A+ +YIYIRGEY+ K LERA +EAYAAG LGKN GSGYD
Sbjct: 98 IPHLLIEGMITSSYALGANLSYIYIRGEYMWVFKTLERAIKEAYAAGWLGKNIQGSGYDL 157
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D+H+H GAGAYICGEETAL+ESLEGK+G PR+KPPFPA +GL+ PT V NVE++A P
Sbjct: 158 DLHVHCGAGAYICGEETALIESLEGKRGNPRIKPPFPAVSGLWQNPTVVNNVESIAAVPW 217
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI--DRHCGGVRGGW 334
I+ +A G + ++GTKL SGH+ P E E+ + ++E I D +CGG+
Sbjct: 218 IVMNTGAEYAKIGIERSTGTKLISASGHIKNPGVYEIELGVSVEEFINSDEYCGGMI--- 274
Query: 335 DN--LLAVIPGGSSVPLLPKHIC------DDVLMDYDALK----AVQSGLGTAAVIVMDK 382
D+ L A++PGGSSVP+LP H+ +D LM Y++L A S LG+ IV +
Sbjct: 275 DDRPLKALVPGGSSVPILPAHLIYKTAAGNDRLMTYESLSDGGFATGSMLGSGGFIVYND 334
Query: 383 STDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI 442
+T +V S FY HESCGQCTPCREGTGWL ++ R++ G+ + E+I++L + +I
Sbjct: 335 TTCIVRNTWNFSRFYHHESCGQCTPCREGTGWLEKVLHRIENGHGREEDIELLLSIQSKI 394
Query: 443 EGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
EG+TIC LGDAA+WPV IRHFR E E I+
Sbjct: 395 EGNTICPLGDAASWPVAAAIRHFREEFEYHIR 426
>gi|118617951|ref|YP_906283.1| NADH dehydrogenase I subunit F [Mycobacterium ulcerans Agy99]
gi|118570061|gb|ABL04812.1| NADH dehydrogenase I (chain F) NuoF (NADH- ubiquinone
oxidoreductase chain F) [Mycobacterium ulcerans Agy99]
Length = 448
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/393 (53%), Positives = 271/393 (68%), Gaps = 9/393 (2%)
Query: 81 KRGDWHRTKDLVLK-GADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDG---RPSYL 136
+R D +R + L G D ++ VK SGLRGRGGAGF +G KWSF+P+ G +P YL
Sbjct: 28 RRHDGYRALEKALAMGPDAVIGTVKDSGLRGRGGAGFSTGTKWSFIPQGDAGPAAKPHYL 87
Query: 137 VVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERAR 196
VVNADESEPGTCKD +M PH L+EG +IA +RAS A+IY+RGE + + L+ A
Sbjct: 88 VVNADESEPGTCKDIPLMLATPHVLVEGVIIAAYAIRASHAFIYVRGEVLPVLRRLQNAV 147
Query: 197 QEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANA 256
EAYAAGLLG+N GSG+D ++ +H GAGAYICGEETALL+SLEG++G+PRL+PPFPA A
Sbjct: 148 AEAYAAGLLGRNINGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVA 207
Query: 257 GLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMS 316
GLYGCPT + NVET+A P+I+ G DWF S G + + G L+ +SGHV +P E +
Sbjct: 208 GLYGCPTVINNVETIASVPSIILNGVDWFRSMGSEKSPGFTLYSLSGHVTRPGQYEAPLG 267
Query: 317 IPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP-KHICDDVLMDYDALKAVQSGLGTA 375
I L+EL+D + GG+R G L PGGSS PLL +H+ DV +DY+ + V S LGT
Sbjct: 268 ITLRELLD-YAGGIRAG-HQLKFWTPGGSSTPLLTDEHL--DVPLDYEGVGGVGSMLGTK 323
Query: 376 AVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDML 435
A+ + D++T VV A+ R + FYKHESCG+CTPCREGT WL I RL+ G E+ID L
Sbjct: 324 ALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKIYARLETGKGTREDIDKL 383
Query: 436 QEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 468
+++ I G + CALGD AA PV I+HF+ E
Sbjct: 384 LDISDSILGKSFCALGDGAASPVMSSIKHFQNE 416
>gi|452124075|ref|ZP_21936659.1| NADH dehydrogenase I subunit F [Bordetella holmesii F627]
gi|452127460|ref|ZP_21940041.1| NADH dehydrogenase I subunit F [Bordetella holmesii H558]
gi|451923305|gb|EMD73446.1| NADH dehydrogenase I subunit F [Bordetella holmesii F627]
gi|451926740|gb|EMD76870.1| NADH dehydrogenase I subunit F [Bordetella holmesii H558]
Length = 455
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/404 (51%), Positives = 270/404 (66%), Gaps = 5/404 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + ++ G + ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 48 LEDYVKRGGYEALRKILTTGLKPEDVIAEVKASGLRGRGGAGFPTGLKWSFMPRAFPGQ- 106
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R +PH ++EG IA M S Y YI GE + E
Sbjct: 107 KYLVCNSDEGEPGTFKDRDILRFNPHIVIEGMAIAAFAMGISVGYNYIHGEIFEVYERFE 166
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG GS + F +H +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 167 AALEEARAAGFLGDKLLGSDFSFQLHAFHGYGAYICGEETALLESLEGKKGQPRFKPPFP 226
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G + G+ NN GTK+F ++G V +P E
Sbjct: 227 ASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLEVGKPNNGGTKIFSITGDVERPGNYEI 286
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P +L++ GG+RGG L AVIPGGSS P+LP I D MDYD++ S LG
Sbjct: 287 PMGTPFSKLLEL-AGGMRGG-KKLKAVIPGGSSAPVLPADIIMDCTMDYDSIAKAGSMLG 344
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G+ + E++D
Sbjct: 345 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMVHRIETGHGRPEDLD 404
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+L V I G TICALGDAAA PV+G I+HFR E I+ +
Sbjct: 405 LLDNVASNIMGRTICALGDAAAMPVRGFIKHFRDEFAHHIEHKS 448
>gi|393776303|ref|ZP_10364599.1| NADH:ubiquinone oxidoreductase, chain F [Ralstonia sp. PBA]
gi|392716692|gb|EIZ04270.1| NADH:ubiquinone oxidoreductase, chain F [Ralstonia sp. PBA]
Length = 431
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/405 (51%), Positives = 277/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + + ++ + + ++ ++K SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYAQLRRILEEKITPEQVIADIKTSGLRGRGGAGFPTGLKWSFMPRQFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R++PH L+EG I M + Y YI GE NE K E
Sbjct: 83 KYLVCNSDEGEPGTFKDRDILRYNPHALIEGMAIGAYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N GSG+ F +H H+G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 143 AALEEARAAGYLGDNILGSGFSFQLHAHHGFGAYICGEETALLESIEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P IL GP+ + G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFILAVGPENYLQMGKPNNGGTKIFSISGDVERPGNYEV 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L+D GG+RGG + AVIPGGSS P++P + MDYD + S LG
Sbjct: 263 PLGTPFAALLDL-AGGMRGG-KKIKAVIPGGSSAPVVPGDVMMQTDMDYDGIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ +++R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMVDRIEHGQGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWNEFEYHV-EHKQ 424
>gi|312796896|ref|YP_004029818.1| NADH-quinone oxidoreductase subunit F [Burkholderia rhizoxinica HKI
454]
gi|312168671|emb|CBW75674.1| NADH-quinone oxidoreductase chain F (EC 1.6.5.3) [Burkholderia
rhizoxinica HKI 454]
Length = 441
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/426 (48%), Positives = 274/426 (64%), Gaps = 21/426 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H +P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHINPLILAGLNGENWH-LQDYVARGGYQQLRRILEQKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E+A EA AAG LG N GSG+ F++H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIWEVYERFEQALDEARAAGYLGHNILGSGFSFELHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G +G PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASYGAFGKPTTINNTETFAAVPFLLAIGPQQYLELG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG VN P E + P +L++ GGVRG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVNLPGNYEVPLGTPFAKLMEL-AGGVRG---QIKAVIPGGSSAPV 294
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P +DYD++ S LG+ AVIVM+ + +V ++ RLSYFY ESCGQCTPCR
Sbjct: 295 VPGEQMMQTDLDYDSIAKAGSMLGSGAVIVMNDTRCMVRSLLRLSYFYYEESCGQCTPCR 354
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++HF E
Sbjct: 355 EGTGWLYRVVHRIEHGQGRQEDLDLLNSVAQNIMGRTICALGDAAAMPVRGMLKHFWNEF 414
Query: 470 ERRIKE 475
E ++
Sbjct: 415 EYHVEH 420
>gi|323525441|ref|YP_004227594.1| NADH-quinone oxidoreductase subunit F [Burkholderia sp. CCGE1001]
gi|323382443|gb|ADX54534.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. CCGE1001]
Length = 442
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 274/424 (64%), Gaps = 19/424 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHSLIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE K E A EA AG LG+N GSG+ F++H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIWEVYKRFEEALDEARRAGFLGENIMGSGFSFELHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F +SG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSISGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-RKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVHRIEHGLGRPEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRI 473
E +
Sbjct: 417 EYHV 420
>gi|385203218|ref|ZP_10030088.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. Ch1-1]
gi|385183109|gb|EIF32383.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. Ch1-1]
Length = 442
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/421 (48%), Positives = 273/421 (64%), Gaps = 22/421 (5%)
Query: 71 MHD----PFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLRGRG 112
+HD P + + +WH +D V +G + ++ +VK SGLRGRG
Sbjct: 4 LHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLRGRG 62
Query: 113 GAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
GAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I M
Sbjct: 63 GAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHALIEGMAIGAYAM 121
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
+ Y YI GE K E+A EA AG LG+N GSG+ F++H H+G GAYICGEE
Sbjct: 122 GITVGYNYIHGEIWEVYKRFEQALDEARRAGFLGENIMGSGFSFELHAHHGYGAYICGEE 181
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
TALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G+ N
Sbjct: 182 TALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIGKPN 241
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
N GTK+F ++G V +P E + P L++ GGVRGG + AVIPGGSS P++P
Sbjct: 242 NGGTKIFSIAGDVERPGNYEIPLGTPFATLMEL-AGGVRGG-KKIKAVIPGGSSAPVIPG 299
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
I MDYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGT
Sbjct: 300 DIMMQTDMDYDSIAKQGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCREGT 359
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
GWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E E
Sbjct: 360 GWLYRVVHRIEHGLGRPEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEFEYH 419
Query: 473 I 473
+
Sbjct: 420 V 420
>gi|291296251|ref|YP_003507649.1| NADH-quinone oxidoreductase subunit F [Meiothermus ruber DSM 1279]
gi|290471210|gb|ADD28629.1| NADH-quinone oxidoreductase, F subunit [Meiothermus ruber DSM 1279]
Length = 438
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 273/400 (68%), Gaps = 10/400 (2%)
Query: 80 MKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVN 139
+ G + + + +G DW++ EVKKSGLRGRGGAGFP+GLKWSFMP+ + G+ Y+V N
Sbjct: 33 LAHGGYQAIRKAIAQGQDWVIEEVKKSGLRGRGGAGFPTGLKWSFMPR-NTGKQHYIVCN 91
Query: 140 ADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEA 199
ADESEPG+ KDR +M DPH+L+EG +IAGV ++AS YIYIRGEY L A +EA
Sbjct: 92 ADESEPGSFKDRYLMEDDPHQLIEGMMIAGVAIQASKGYIYIRGEYRRAYDRLIAAIREA 151
Query: 200 YAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLY 259
YAAG LG+N G+G+ FD+++H GAGAYICGEETAL+ SLEG + PR+KPPFPA AGL+
Sbjct: 152 YAAGYLGQNVMGTGFSFDLYVHRGAGAYICGEETALMNSLEGLRANPRMKPPFPAQAGLW 211
Query: 260 GCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPL 319
G PTT+ NVE++ I+ RG DWFAS G + + G KLF VSG +P E +
Sbjct: 212 GMPTTINNVESLCSVVHIIERGADWFASMGTEKSKGHKLFQVSGPFKRPGVYELPLGTTF 271
Query: 320 KELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVL---MDYDALKAVQSGLGTAA 376
+EL+ GG + + A+IPGGSS P LP + D++L MDY+++ A S LGT
Sbjct: 272 RELLFDWAGGPT---EPIQAIIPGGSSCPPLPWN--DEILDTPMDYESISAKGSLLGTGG 326
Query: 377 VIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG-TGWLWMIMERLKVGNAKLEEIDML 435
VI + S +VDA+ ++ FY HESCG+CTPCREG +GW+ + E++ G + ++++L
Sbjct: 327 VIGIPASMSMVDAMWNITRFYGHESCGKCTPCREGVSGWMVSLFEKIGTGQGQKGDVELL 386
Query: 436 QEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
+ + QIEG + CAL DAA WPV+G ++HFR + +++
Sbjct: 387 ESMLDQIEGRSFCALADAACWPVRGSLKHFRHQFVEAVEQ 426
>gi|349575437|ref|ZP_08887354.1| NADH-quinone oxidoreductase subunit F [Neisseria shayeganii 871]
gi|348013016|gb|EGY51943.1| NADH-quinone oxidoreductase subunit F [Neisseria shayeganii 871]
Length = 431
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 264/405 (65%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKG--ADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ RG + + ++ + D ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G
Sbjct: 23 LEAYQARGGYQALRKILTENMSQDDVIAEVKTSGLRGRGGAGFPTGLKWSFMPRSFPG-A 81
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
Y+V N DE EPGT KDR+I+ +PH L+EG +IAG M A A Y YI GE + E
Sbjct: 82 KYVVCNTDEGEPGTFKDRDIINFNPHALIEGMIIAGYAMGAEAGYNYIHGEIFEGYQRFE 141
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A EA AG LGKN G+ + F++ +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 142 EALAEARQAGFLGKNIMGTDFSFELFAAHGYGAYICGEETALLESLEGKKGQPRFKPPFP 201
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G FA G +N GTKLF +SGHV +P E
Sbjct: 202 ASYGLYGKPTTINNTETFASVPFIIRDGGQTFADKGIENAGGTKLFSISGHVERPGNYEV 261
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG++ G L AVIPGGSS P+LP + + MDYD++ S LG
Sbjct: 262 PLGTPFAKLLEM-AGGMKDG-KKLKAVIPGGSSAPVLPGEVMMTLNMDYDSIAKAGSMLG 319
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ A+IVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ ++ R+ G + E++D
Sbjct: 320 SGAIIVMDEDVCMVKALERLSYFYHEESCGQCTPCREGTGWLYRVVHRIAEGKGRPEDLD 379
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + G TICAL DAA +PV+ +HFR E E I EH +
Sbjct: 380 LLDSVGNNMAGRTICALADAAVFPVRSFTKHFRHEFEHYI-EHGK 423
>gi|416974644|ref|ZP_11937504.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. TJI49]
gi|325520402|gb|EGC99520.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. TJI49]
Length = 436
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/425 (48%), Positives = 273/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-RKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I MDYD++ V S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 VPGDIMMQTDMDYDSIAKVGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|41409304|ref|NP_962140.1| hypothetical protein MAP3206 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398124|gb|AAS05754.1| NuoF [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 453
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/404 (51%), Positives = 273/404 (67%), Gaps = 8/404 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDG---R 132
L+ + G + K + D ++ VK SGLRGRGGAGF +G KWSF+P+ G +
Sbjct: 35 LQTYHRHGGYTAMKKALAMEPDAVIGMVKDSGLRGRGGAGFSTGTKWSFIPQGDTGAAAK 94
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVNADESEPGTCKD +M PH L+EG +IA +RA+ A+IY+RGE + + L
Sbjct: 95 PHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRANHAFIYVRGEVLPVLRRL 154
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAYAAG LG++ GSG+D ++ +H GAGAYICGEETALL+SLEG++G+PRL+PPF
Sbjct: 155 QNAVAEAYAAGYLGRDIDGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPF 214
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA AGLYGCPT + NVET+A P+I+ G DWF S G + + G L+ +SGHV +P E
Sbjct: 215 PAVAGLYGCPTVINNVETIASVPSIIGNGVDWFRSMGSEKSPGFTLYSLSGHVTRPGQYE 274
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP-KHICDDVLMDYDALKAVQSG 371
+ I L+EL+D + GGVR G L PGGSS PLL +H+ DV +DY+ + V S
Sbjct: 275 APLGITLRELLD-YAGGVRAG-HRLKFWTPGGSSTPLLTDEHL--DVPLDYEGVGGVGSM 330
Query: 372 LGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEE 431
LGT A+ + D++T VV A+ R +YFYKHESCG+CTPCREGT WL I ERL+ G E+
Sbjct: 331 LGTKALEIFDETTCVVRAVRRWTYFYKHESCGKCTPCREGTFWLDQIYERLETGKGTAED 390
Query: 432 IDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
ID L +++ I G + CALGD AA PV I++FR E ++
Sbjct: 391 IDKLLDISDTILGKSFCALGDGAASPVMSSIKYFRDEYVAHVEN 434
>gi|33592012|ref|NP_879656.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
pertussis Tohama I]
gi|33602811|ref|NP_890371.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica RB50]
gi|384203314|ref|YP_005589053.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
pertussis CS]
gi|408416221|ref|YP_006626928.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
pertussis 18323]
gi|410421286|ref|YP_006901735.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica MO149]
gi|410473875|ref|YP_006897156.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
parapertussis Bpp5]
gi|412341855|ref|YP_006970610.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica 253]
gi|427815827|ref|ZP_18982891.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica 1289]
gi|427818375|ref|ZP_18985438.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica D445]
gi|427825762|ref|ZP_18992824.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica Bbr77]
gi|33571656|emb|CAE41149.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
pertussis Tohama I]
gi|33577253|emb|CAE35810.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica RB50]
gi|332381428|gb|AEE66275.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
pertussis CS]
gi|401778391|emb|CCJ63803.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
pertussis 18323]
gi|408443985|emb|CCJ50682.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
parapertussis Bpp5]
gi|408448581|emb|CCJ60264.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica MO149]
gi|408771689|emb|CCJ56493.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica 253]
gi|410566827|emb|CCN24396.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica 1289]
gi|410569375|emb|CCN17476.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica D445]
gi|410591027|emb|CCN06122.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Bordetella
bronchiseptica Bbr77]
Length = 455
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/404 (52%), Positives = 268/404 (66%), Gaps = 5/404 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + ++ G + ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 48 LQEYVKRGGYEALRKILTTGMTPEDVIAEVKASGLRGRGGAGFPTGLKWSFMPRAFPGQ- 106
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R +PH ++EG IA M S Y YI GE + E
Sbjct: 107 KYLVCNSDEGEPGTFKDRDILRFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFEVYERFE 166
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG GS + F +H +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 167 EALEEARAAGFLGDKLLGSDFSFQLHAFHGYGAYICGEETALLESLEGKKGQPRFKPPFP 226
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G + G+ NN GTKLF +SG V +P E
Sbjct: 227 ASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLEVGKPNNGGTKLFSISGDVERPGNYEI 286
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
M P +L++ GG+RGG L AVIPGGSS P+LP I D MDYDA+ S LG
Sbjct: 287 PMGTPFSKLLEL-AGGMRGG-RKLKAVIPGGSSAPVLPADIMMDCTMDYDAIAKAGSMLG 344
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 345 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMVHRIENGQGRPEDLD 404
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
ML V I G TICALGDAAA PV+ I+HFR E I+ +
Sbjct: 405 MLDSVAGNIMGRTICALGDAAAMPVRSFIKHFRDEFAHHIEHKS 448
>gi|194289164|ref|YP_002005071.1| NADH:ubiquinone oxidoreductase complex i, chain f [Cupriavidus
taiwanensis LMG 19424]
gi|193222999|emb|CAQ69004.1| NADH:ubiquinone oxidoreductase complex I, chain F [Cupriavidus
taiwanensis LMG 19424]
Length = 431
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/405 (51%), Positives = 277/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKIPPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRTFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R++PH L+EG I M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRYNPHALIEGMAIGAYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N GSG+ F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGSGFSFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GP+ + G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAVGPENYLKMGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG + AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFAKLLEL-AGGMRGG-KRIKAVIPGGSSAPVVPGDLMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGTGWLYRMVNRIEHGEGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWKEFEYHV-EHKQ 424
>gi|237748886|ref|ZP_04579366.1| NADH dehydrogenase chain F [Oxalobacter formigenes OXCC13]
gi|229380248|gb|EEO30339.1| NADH dehydrogenase chain F [Oxalobacter formigenes OXCC13]
Length = 433
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 274/401 (68%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L + RG + + K ++ + + I++EV+ SGLRGRGGAGFP+ +KW FMPK G+
Sbjct: 24 LADYVSRGGYEQFKRILAERMPRERIIDEVRASGLRGRGGAGFPTAVKWGFMPKDHPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YL+ NADESEPGT KDR+I+R++PH ++EG LIA M +A YIYI GE +
Sbjct: 83 MYLICNADESEPGTFKDRDILRYNPHAVIEGMLIAAYAMGITAGYIYIHGEIWAVYEQFG 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A ++A AGL+G++ GSG+DF++H +G GAYICGEETALLES+EGK+G+PR KPPFP
Sbjct: 143 EAIRQAREAGLIGRDLQGSGFDFELHAFHGYGAYICGEETALLESMEGKRGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A GLYG PTT+ NVET+A P I+ G D +A+ GR N GTK+FC+SG V +P E
Sbjct: 203 ATNGLYGQPTTINNVETLAYVPFIMAMGGDAYAALGRNNCPGTKIFCLSGDVARPGNYEV 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ I EL++ GG++ G + AVIPGGSS P+LP + MDYD++ S LG
Sbjct: 263 PLGISFPELLEL-AGGMKDGL-AMKAVIPGGSSSPVLPAETMMQLNMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
T VIV++++ +V A+ LS FY +ESCGQCTPCREGTGWL ++ER++ G K E++D
Sbjct: 321 TGGVIVLNETRCMVKALLNLSRFYWNESCGQCTPCREGTGWLVSLIERIENGQGKTEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+L V I G TICALGDAAA PV+ I+HFR E E I+
Sbjct: 381 LLDNVAANIMGRTICALGDAAAMPVRSFIKHFRAEFEYHIE 421
>gi|377821140|ref|YP_004977511.1| NADH-quinone oxidoreductase subunit F [Burkholderia sp. YI23]
gi|357935975|gb|AET89534.1| NADH-quinone oxidoreductase, F subunit [Burkholderia sp. YI23]
Length = 440
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/425 (48%), Positives = 276/425 (64%), Gaps = 20/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHSLIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A +EA AG LG N GSG+ F+++ H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRVFEAALEEARQAGYLGANILGSGFSFELYAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLEIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG VN+P E + P L++ GGVRG ++ AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVNRPGNYEIPLGTPFSTLMEL-AGGVRG--QSIKAVIPGGSSAPV 295
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P + MDYD++ S LG+ AVIVM+++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 296 VPGDMMLATDMDYDSIAKAGSMLGSGAVIVMNETRCMVRSLLRLSYFYYEESCGQCTPCR 355
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++HF E
Sbjct: 356 EGTGWLYRVVHRIEHGLGRKEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHFWDEF 415
Query: 470 ERRIK 474
E ++
Sbjct: 416 EYHVE 420
>gi|163855992|ref|YP_001630290.1| NADH dehydrogenase I, 51 kDa subunit, chain F [Bordetella petrii
DSM 12804]
gi|163259720|emb|CAP42021.1| NADH dehydrogenase I, 51 kDa subunit, chain F [Bordetella petrii]
Length = 455
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/404 (51%), Positives = 271/404 (67%), Gaps = 5/404 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + ++ G + ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 48 LQDYVKRGGYEALRKILSSGMKPEDVIAEVKASGLRGRGGAGFPTGLKWSFMPRAFPGQ- 106
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R +PH ++EG IA M S Y YI GE + E
Sbjct: 107 KYLVCNSDEGEPGTFKDRDILRFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFEVYQRFE 166
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N GS + F +H +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 167 EALEEARAAGFLGDNILGSEFSFQLHAFHGYGAYICGEETALLESLEGKKGQPRFKPPFP 226
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I+R G + G+ NN GTK+F ++G V +P E
Sbjct: 227 ASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLEVGKPNNGGTKVFSITGDVERPGNYEI 286
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG L AVIPGGSS P+LP I D+ MDYDA+ S LG
Sbjct: 287 PLGTPFSKLLEL-AGGMRGG-KKLKAVIPGGSSAPVLPADIMMDITMDYDAIAKAGSMLG 344
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 345 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMVHRIEHGQGRQEDLD 404
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+L V I G TICALGDAAA PV+G ++H+R E I+ +
Sbjct: 405 LLDSVAGNIMGRTICALGDAAAMPVRGFLKHYRDEFAHHIEHKS 448
>gi|254251866|ref|ZP_04945184.1| NADH dehydrogenase [Burkholderia dolosa AUO158]
gi|124894475|gb|EAY68355.1| NADH dehydrogenase [Burkholderia dolosa AUO158]
Length = 436
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/425 (48%), Positives = 273/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAVGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P + MDYD++ V S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 VPGDVMMQTDMDYDSIAKVGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|73540669|ref|YP_295189.1| NADH-quinone oxidoreductase subunit F [Ralstonia eutropha JMP134]
gi|72118082|gb|AAZ60345.1| NADH dehydrogenase subunit F [Ralstonia eutropha JMP134]
Length = 431
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/405 (51%), Positives = 276/405 (68%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + K ++ + + ++ +VK SGLRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 24 LEDYVKRGGYQQLKRILTEKIPPEQVIADVKASGLRGRGGAGFPTGLKWSFMPRTFPGQ- 82
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N DE EPGT KDR+I+R +PH L+EG I M + Y YI GE NE K E
Sbjct: 83 KYLVCNTDEGEPGTFKDRDIIRFNPHSLIEGMAIGAYAMGITVGYNYIHGEIWNEYKIFE 142
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A +EA AAG LG N GSG+ F +H H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 143 EALEEARAAGFLGDNILGSGFSFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 202
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P +L GP+ + G+ NN GTK+F +SG V +P E
Sbjct: 203 ASFGLYGKPTTINNTETFAAVPFLLAIGPENYLKMGKPNNGGTKIFSISGDVERPGNYEI 262
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG + AVIPGGSS P++P + MDYD++ S LG
Sbjct: 263 PLGTPFAKLLEL-AGGMRGG-KRIKAVIPGGSSAPVVPGEMMMASDMDYDSIAKAGSMLG 320
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 321 SGAVIVMDETRCMVRSLLRLSYFYFEESCGQCTPCREGTGWLYRMVNRIEHGEGRQEDLD 380
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L V + I G TICALGDAAA PV+G+++H+ E E + EH +
Sbjct: 381 LLNNVAENIMGRTICALGDAAAMPVRGMLKHYWKEFEYHV-EHKQ 424
>gi|313679590|ref|YP_004057329.1| NADH dehydrogenase subunit f [Oceanithermus profundus DSM 14977]
gi|313152305|gb|ADR36156.1| NADH dehydrogenase subunit F [Oceanithermus profundus DSM 14977]
Length = 439
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/395 (51%), Positives = 266/395 (67%), Gaps = 13/395 (3%)
Query: 86 HRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADES 143
+ T VL G + +V EVKKSGLRGRGGAGFP+G+KWSFMP +DG+ YL+ NADES
Sbjct: 39 YETARAVLTGKQPEEVVEEVKKSGLRGRGGAGFPTGVKWSFMP--NDGQQHYLIANADES 96
Query: 144 EPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAG 203
EP + KDR +M DPH+L+EG +I G +RA+ Y+YIRGEY L A +EAY G
Sbjct: 97 EPASFKDRYLMEDDPHQLIEGMIIGGYAIRATKGYVYIRGEYRKAYDRLTAAIREAYERG 156
Query: 204 LLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPT 263
LGKN GSG+DFD+++H GAGAYICGEETAL+ SLEG + PR+KPPFPA +GLYG PT
Sbjct: 157 YLGKNLFGSGFDFDLYVHRGAGAYICGEETALMNSLEGLRANPRMKPPFPAQSGLYGKPT 216
Query: 264 TVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELI 323
T+ N+E++A IL+RG DWFA G + + G KLF VSG +P E + P +ELI
Sbjct: 217 TINNIESLASVVHILQRGADWFAQMGTERSKGMKLFQVSGPARRPGVYELPLGTPFRELI 276
Query: 324 DRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVL---MDYDALKAVQSGLGTAAVIVM 380
GG + + A IPGGSS PLLP D+ L MDY++L A +S LGT V+++
Sbjct: 277 YDWAGGPT---EPIKAFIPGGSSTPLLP--FTDEYLDLPMDYESLVAAKSALGTGGVVLI 331
Query: 381 DKSTDVVDAIARLSYFYKHESCGQCTPCREG-TGWLWMIMERLKVGNAKLEEIDMLQEVT 439
+S +VDA+ L FY HESCG+CTPCREG +GWL + E+ + G A E++ ++++
Sbjct: 332 PESVCIVDAMWNLIRFYGHESCGKCTPCREGVSGWLPQLFEKFERGQATQEDLKTMEDLL 391
Query: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
QIEG + C L DAA WP++G +RHFR E I+
Sbjct: 392 DQIEGRSFCPLADAAVWPIRGALRHFRDEFLHHIE 426
>gi|91782617|ref|YP_557823.1| NADH dehydrogenase I (chain F), NuoF [Burkholderia xenovorans
LB400]
gi|91686571|gb|ABE29771.1| NADH dehydrogenase subunit F [Burkholderia xenovorans LB400]
Length = 442
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 273/421 (64%), Gaps = 22/421 (5%)
Query: 71 MHD----PFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLRGRG 112
+HD P + + +WH +D V +G + ++ +VK SGLRGRG
Sbjct: 4 LHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLRGRG 62
Query: 113 GAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGM 172
GAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I M
Sbjct: 63 GAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHSLIEGMAIGAYAM 121
Query: 173 RASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEE 232
+ Y YI GE K E+A EA AG LG+N GSG+ F++H H+G GAYICGEE
Sbjct: 122 GITVGYNYIHGEIWEVYKRFEQALDEARRAGFLGENIMGSGFSFELHAHHGYGAYICGEE 181
Query: 233 TALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKN 292
TALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G+ N
Sbjct: 182 TALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIGKPN 241
Query: 293 NSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK 352
N GTK+F ++G V +P E + P L++ GG+RGG + AVIPGGSS P++P
Sbjct: 242 NGGTKIFSIAGDVERPGNYEIPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPVIPG 299
Query: 353 HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGT 412
I MDYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGT
Sbjct: 300 DIMMQTDMDYDSIAKQGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCREGT 359
Query: 413 GWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERR 472
GWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E E
Sbjct: 360 GWLYRVVHRIEHGLGRPEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEFEYH 419
Query: 473 I 473
+
Sbjct: 420 V 420
>gi|187923345|ref|YP_001894987.1| NADH-quinone oxidoreductase subunit F [Burkholderia phytofirmans
PsJN]
gi|187714539|gb|ACD15763.1| NADH-quinone oxidoreductase, F subunit [Burkholderia phytofirmans
PsJN]
Length = 442
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 274/424 (64%), Gaps = 19/424 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGDNWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRFNPHSLIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE K E+A EA AG LG+N GSG+ F++H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIWEVYKRFEQALDEARRAGFLGENIMGSGFSFELHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F V+G V +P E + P L++ GG+R G + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVAGDVERPGNYEIPLGTPFSTLMEL-AGGMR-GVKKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I MDYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDMDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVHRIEHGLGRPEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRI 473
E +
Sbjct: 417 EYHV 420
>gi|167569427|ref|ZP_02362301.1| NADH-quinone oxidoreductase, F subunit [Burkholderia oklahomensis
C6786]
Length = 436
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 273/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLTGENWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A +EA AG LG N GSG+ F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALEEARRAGFLGDNIMGSGFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAVGPQNYLEMG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|118462706|ref|YP_883190.1| NADH-quinone oxidoreductase, F subunit [Mycobacterium avium 104]
gi|254776460|ref|ZP_05217976.1| NADH-quinone oxidoreductase, F subunit [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118163993|gb|ABK64890.1| NADH-quinone oxidoreductase, F subunit [Mycobacterium avium 104]
Length = 453
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/404 (51%), Positives = 273/404 (67%), Gaps = 8/404 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDG---R 132
L+ + G + K + D ++ VK SGLRGRGGAGF +G KWSF+P+ G +
Sbjct: 35 LQTYHRHGGYAAMKKALAMEPDAVIGMVKDSGLRGRGGAGFSTGTKWSFIPQGDTGAAAK 94
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
P YLVVNADESEPGTCKD +M PH L+EG +IA +RA+ A+IY+RGE + + L
Sbjct: 95 PHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRANHAFIYVRGEVLPVLRRL 154
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
+ A EAYAAG LG++ GSG+D ++ +H GAGAYICGEETALL+SLEG++G+PRL+PPF
Sbjct: 155 QNAVAEAYAAGYLGRDIDGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPF 214
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA AGLYGCPT + NVET+A P+I+ G DWF S G + + G L+ +SGHV +P E
Sbjct: 215 PAVAGLYGCPTVINNVETIASVPSIIGNGVDWFRSMGSEKSPGFTLYSLSGHVTRPGQYE 274
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLP-KHICDDVLMDYDALKAVQSG 371
+ I L+EL+D + GGVR G L PGGSS PLL +H+ DV +DY+ + V S
Sbjct: 275 APLGITLRELLD-YAGGVRAG-HRLKFWTPGGSSTPLLTDEHL--DVPLDYEGVGGVGSM 330
Query: 372 LGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEE 431
LGT A+ + D++T VV A+ R +YFYKHESCG+CTPCREGT WL I ERL+ G E+
Sbjct: 331 LGTKALEIFDETTCVVRAVRRWTYFYKHESCGKCTPCREGTFWLDQIYERLETGKGTAED 390
Query: 432 IDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 475
ID L +++ I G + CALGD AA PV I++FR E ++
Sbjct: 391 IDKLLDISDTILGKSFCALGDGAASPVMSSIKYFRDEYVAHVEN 434
>gi|253996968|ref|YP_003049032.1| NADH-quinone oxidoreductase subunit F [Methylotenera mobilis JLW8]
gi|253983647|gb|ACT48505.1| NADH-quinone oxidoreductase, F subunit [Methylotenera mobilis JLW8]
Length = 438
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 268/402 (66%), Gaps = 7/402 (1%)
Query: 76 LKGAMKRGDWHRTKDLV---LKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGR 132
L+ +K G + K +V +K D I++EVK SGLRGRGGAGFP+GLKWSFMP+ DG
Sbjct: 32 LETYLKLGGYAALKRVVTEKVKPTD-IISEVKASGLRGRGGAGFPTGLKWSFMPRYFDGV 90
Query: 133 PSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNL 192
YLV N DE EPGT KDR+I+R++PH+L+EG IA + A Y YI GE + +
Sbjct: 91 -KYLVCNTDEGEPGTFKDRDIIRYNPHQLIEGMAIAAYTLGARVGYNYIHGEIWQDYEIF 149
Query: 193 ERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPF 252
E A EA AAG LG++ G+ + FD++ +G GAYICGEETAL+ES+EGK+G+PR KPPF
Sbjct: 150 EAALHEAKAAGYLGEDLFGTNFSFDLYAVHGYGAYICGEETALIESIEGKKGQPRFKPPF 209
Query: 253 PANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVE 312
PA+ G++G PT V N E+ P I++ G FA G N+ GTKLF +SGHV KP E
Sbjct: 210 PASYGVFGKPTNVNNTESYTSIPWIMQNGGKAFADLGVANSGGTKLFSISGHVEKPGNYE 269
Query: 313 EEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGL 372
M +P EL+ GG+ G L AVIPGG S ++P MDYD L +S L
Sbjct: 270 VNMGMPFTELLAL-AGGIWKG-RQLKAVIPGGPSTAVMPASAILGATMDYDGLSKARSSL 327
Query: 373 GTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEI 432
G ++IVMD +T +V A+ RLSYF+ ESCGQCTPCREGTGW++ +++R+ G K+E++
Sbjct: 328 GAGSMIVMDDTTCMVKALHRLSYFFYEESCGQCTPCREGTGWVYRVIDRIVKGQGKMEDL 387
Query: 433 DMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
D+L +V+ I G TICALG+AAA PV I+HFRPE E I+
Sbjct: 388 DLLTDVSNNIAGRTICALGEAAATPVLSFIKHFRPEFEYYIQ 429
>gi|413958287|ref|ZP_11397526.1| NADH-quinone oxidoreductase subunit F [Burkholderia sp. SJ98]
gi|413940867|gb|EKS72827.1| NADH-quinone oxidoreductase subunit F [Burkholderia sp. SJ98]
Length = 440
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/425 (48%), Positives = 276/425 (64%), Gaps = 20/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A +EA AG LG N GSG+ F+++ H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRVFEAALEEARQAGYLGANILGSGFSFELYAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLEIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG VN+P E + P L++ GGVRG ++ AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVNRPGNYEIPLGTPFSTLMEL-AGGVRG--KSIKAVIPGGSSAPV 295
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P + MDYD++ S LG+ AVIVM+++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 296 VPGDMMLATDMDYDSIAKAGSMLGSGAVIVMNETRCMVRSLLRLSYFYYEESCGQCTPCR 355
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++HF E
Sbjct: 356 EGTGWLYRVVHRIEHGLGRKEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHFWDEF 415
Query: 470 ERRIK 474
E ++
Sbjct: 416 EYHVE 420
>gi|329118904|ref|ZP_08247599.1| NADH-quinone oxidoreductase subunit F [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464932|gb|EGF11222.1| NADH-quinone oxidoreductase subunit F [Neisseria bacilliformis ATCC
BAA-1200]
Length = 431
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/405 (51%), Positives = 275/405 (67%), Gaps = 6/405 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L ++RG + + ++ + D ++ EVK SGLRGRGGAGFPSGLKWSFMP+ G
Sbjct: 23 LDAYLQRGGYQALRKILSENTSQDDVIAEVKTSGLRGRGGAGFPSGLKWSFMPRSFPGE- 81
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
Y+V N DE EPGT KDR+I+ ++PH L+EG +I G M A+A Y YI GE + E
Sbjct: 82 KYVVCNTDEGEPGTFKDRDIILYNPHALIEGMIIGGYAMGAAAGYNYIHGEIFEGYQRFE 141
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
+A +A AAG LG+N GSG++F+++ H+G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 142 QALAQARAAGYLGQNILGSGFNFELYAHHGYGAYICGEETALLESLEGKKGQPRFKPPFP 201
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GL+G PTT+ N ET + P I+R G FA G +N GTKLF +SGHV +P E
Sbjct: 202 ASFGLFGKPTTINNTETFSSVPFIIRDGGKTFADKGIENAGGTKLFSISGHVERPGNYEV 261
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P EL++ GG++ G L AVIPGGSS P++P + + MDYD++ S LG
Sbjct: 262 PLGTPFAELLEM-AGGMKNG-KKLKAVIPGGSSSPVIPGDVMMTLNMDYDSIAKAGSMLG 319
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD+ +V A+ RLSYFY ESCGQCTPCREGTGWL+ I+ R+ G K+E++D
Sbjct: 320 SGAVIVMDEDVCMVKALERLSYFYFEESCGQCTPCREGTGWLYRIVHRIVNGQGKMEDLD 379
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 478
+L+ V + G TICAL DAA +PV+G ++H+R E I EH +
Sbjct: 380 LLESVGNNMAGRTICALADAAVFPVRGFMKHYRDEFIHYI-EHGK 423
>gi|187477546|ref|YP_785570.1| NADH dehydrogenase I subunit F [Bordetella avium 197N]
gi|115422132|emb|CAJ48656.1| NADH dehydrogenase I chain F [Bordetella avium 197N]
Length = 455
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/400 (51%), Positives = 267/400 (66%), Gaps = 5/400 (1%)
Query: 80 MKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLV 137
+KRG + + ++ G + ++ EVK SGLRGRGGAGFP+GLKWSFMP+ G+ YLV
Sbjct: 52 VKRGGYEALRKILTTGMKPEDVIAEVKASGLRGRGGAGFPTGLKWSFMPRAFPGQ-KYLV 110
Query: 138 VNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQ 197
N+DE EPGT KDR+I+R +PH ++EG IA M S Y YI GE + E A +
Sbjct: 111 CNSDEGEPGTFKDRDILRFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFEVYERFEEALE 170
Query: 198 EAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAG 257
EA AAG LG GS ++F +H +G GAYICGEETALLESLEGK+G+PR KPPFPA+ G
Sbjct: 171 EARAAGFLGDKLLGSDFNFQLHAFHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFG 230
Query: 258 LYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSI 317
LYG PTT+ N ET A P I+R G + G+ NN GTK+F ++G V +P E M
Sbjct: 231 LYGKPTTINNTETFAAVPWIIRNGGQAYLEVGKPNNGGTKIFSITGDVERPGNYEIPMGT 290
Query: 318 PLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAV 377
P +L++ GG+RGG L AVIPGGSS P+LP I + MDYD++ S LG+ AV
Sbjct: 291 PFSKLLEL-AGGMRGG-KKLKAVIPGGSSAPVLPADIIMECTMDYDSIAKAGSMLGSGAV 348
Query: 378 IVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQE 437
IVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++DML
Sbjct: 349 IVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMVHRIETGQGRAEDLDMLDT 408
Query: 438 VTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
V I G TICALGDAAA PV+ I+HFR E I+ +
Sbjct: 409 VAGNIMGRTICALGDAAAMPVRSFIKHFRDEFAHHIEHKS 448
>gi|134296428|ref|YP_001120163.1| NADH-quinone oxidoreductase, F subunit [Burkholderia vietnamiensis
G4]
gi|387902788|ref|YP_006333127.1| NADH-ubiquinone oxidoreductase subunit F [Burkholderia sp. KJ006]
gi|134139585|gb|ABO55328.1| NADH dehydrogenase subunit F [Burkholderia vietnamiensis G4]
gi|387577680|gb|AFJ86396.1| NADH-ubiquinone oxidoreductase chain F [Burkholderia sp. KJ006]
Length = 436
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 272/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLSIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|165918808|ref|ZP_02218894.1| NADH dehydrogenase (ubiquinone), F subunit [Coxiella burnetii Q321]
gi|165917532|gb|EDR36136.1| NADH dehydrogenase (ubiquinone), F subunit [Coxiella burnetii Q321]
Length = 422
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 254/375 (67%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+NE+K+S LRGRGGAGFP+GLKWSF+P+ G Y++ N+DESEPGT KDR+I+R +P
Sbjct: 44 IINEIKESSLRGRGGAGFPTGLKWSFIPRDKTGE-KYVICNSDESEPGTFKDRDILRFNP 102
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H++LEG IA + A+ Y ++RGE+ E+A +A AGL+GKN SG D ++
Sbjct: 103 HQVLEGIAIACYTLGATVGYNFLRGEFWEPFNRCEQALAQAREAGLIGKNVLNSGVDIEI 162
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+ AGAYICGEETAL+ SLEGK+G PR KPPFPAN GLY P+ + N ET A P IL
Sbjct: 163 FNHFSAGAYICGEETALMNSLEGKRGWPRFKPPFPANFGLYERPSNINNTETYASVPVIL 222
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WFA G N GTK+F VSGHV KP E + IP +L+ GG+R G L
Sbjct: 223 EKGGKWFADLGPPKNGGTKIFSVSGHVAKPGNYEVPLGIPFADLLAL-AGGMREG-SELK 280
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + +M +D L S LG+ V+VMD+ST +V + R+S FY
Sbjct: 281 AVIPGGSSMPVLPAEVMMKAIMSFDGLVEAGSMLGSGGVMVMDQSTCMVKVLERISKFYM 340
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCGQCTPCREGTGWL+ ++ R++ G +I+ L V K IEG TICA G+AAAWPV
Sbjct: 341 HESCGQCTPCREGTGWLYRLVHRIEKGEGTKRDIEQLSRVAKGIEGRTICAFGEAAAWPV 400
Query: 459 QGLIRHFRPELERRI 473
G+++HF E E +
Sbjct: 401 SGMLKHFYDEFEYHV 415
>gi|78067041|ref|YP_369810.1| NADH-quinone oxidoreductase subunit F [Burkholderia sp. 383]
gi|254247662|ref|ZP_04940983.1| NADH:ubiquinone oxidoreductase [Burkholderia cenocepacia PC184]
gi|421867930|ref|ZP_16299582.1| NADH-ubiquinone oxidoreductase chain F [Burkholderia cenocepacia
H111]
gi|77967786|gb|ABB09166.1| NADH dehydrogenase subunit F [Burkholderia sp. 383]
gi|124872438|gb|EAY64154.1| NADH:ubiquinone oxidoreductase [Burkholderia cenocepacia PC184]
gi|358071861|emb|CCE50460.1| NADH-ubiquinone oxidoreductase chain F [Burkholderia cenocepacia
H111]
Length = 436
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 272/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLSIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|170733604|ref|YP_001765551.1| NADH-quinone oxidoreductase,subunit F [Burkholderia cenocepacia
MC0-3]
gi|169816846|gb|ACA91429.1| NADH-quinone oxidoreductase, F subunit [Burkholderia cenocepacia
MC0-3]
Length = 436
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 272/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLSIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-KRIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|170698114|ref|ZP_02889194.1| NADH-quinone oxidoreductase, F subunit [Burkholderia ambifaria
IOP40-10]
gi|172061204|ref|YP_001808856.1| NADH-quinone oxidoreductase subunit F [Burkholderia ambifaria
MC40-6]
gi|170136972|gb|EDT05220.1| NADH-quinone oxidoreductase, F subunit [Burkholderia ambifaria
IOP40-10]
gi|171993721|gb|ACB64640.1| NADH-quinone oxidoreductase, F subunit [Burkholderia ambifaria
MC40-6]
Length = 440
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 272/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLSIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-RKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|389794713|ref|ZP_10197859.1| NADH-quinone oxidoreductase subunit F [Rhodanobacter fulvus Jip2]
gi|388431927|gb|EIL88967.1| NADH-quinone oxidoreductase subunit F [Rhodanobacter fulvus Jip2]
Length = 436
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/377 (55%), Positives = 265/377 (70%), Gaps = 5/377 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
++ E+KKS LRGRGGAGFP+GLKWSFMPK Y++ N+DESEPGT KDR+I+R++P
Sbjct: 50 LIEEIKKSSLRGRGGAGFPTGLKWSFMPK--GDMQKYILCNSDESEPGTAKDRDILRYNP 107
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNE-RKNLERARQEAYAAGLLGKNACGSGYDFD 217
H ++EG IA + AY Y+RGE+ +E ++ E A EAYAAGLLGKN G+G D D
Sbjct: 108 HAVIEGLAIACYCTGTTVAYNYLRGEFHHEPFEHFEAALAEAYAAGLLGKNVQGTGLDVD 167
Query: 218 VHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTI 277
++ GAGAYICGEETA++ESLEGK+G PR KPPFPAN GLYG PTT+ N ET A P I
Sbjct: 168 IYAALGAGAYICGEETAMMESLEGKKGMPRFKPPFPANFGLYGKPTTINNTETYASVPAI 227
Query: 278 LRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNL 337
+R G DWF + G+ NN G K+F VSGHVN+P E + K+L++ GGVR G L
Sbjct: 228 IRNGADWFLNLGKPNNGGPKIFSVSGHVNRPGNYEIRLGTSFKDLLEM-AGGVRNG-HKL 285
Query: 338 LAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFY 397
AVIPGGSS+ +LP I + MDYD L+ SGLG+ AVIVMD++T +V R+S FY
Sbjct: 286 KAVIPGGSSMKVLPADIMLESTMDYDCLQKAGSGLGSGAVIVMDETTCMVRVCHRISRFY 345
Query: 398 KHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWP 457
K ESCGQCTPCREGTGW+ ++ R+ GN E++ L+ + QIEGHTICA G+AAAWP
Sbjct: 346 KAESCGQCTPCREGTGWMHRVLTRIVEGNGTQEDLHRLKAIAGQIEGHTICAFGEAAAWP 405
Query: 458 VQGLIRHFRPELERRIK 474
VQG + F E E ++
Sbjct: 406 VQGFLNRFWNEFEYFVE 422
>gi|153207266|ref|ZP_01946030.1| NADH dehydrogenase (ubiquinone), F subunit [Coxiella burnetii 'MSU
Goat Q177']
gi|154706359|ref|YP_001423961.1| NADH-quinone oxidoreductase chain F [Coxiella burnetii Dugway
5J108-111]
gi|212212187|ref|YP_002303123.1| NADH-quinone oxidoreductase chain F [Coxiella burnetii CbuG_Q212]
gi|212218217|ref|YP_002305004.1| NADH-quinone oxidoreductase chain F [Coxiella burnetii CbuK_Q154]
gi|120576754|gb|EAX33378.1| NADH dehydrogenase (ubiquinone), F subunit [Coxiella burnetii 'MSU
Goat Q177']
gi|154355645|gb|ABS77107.1| NADH-quinone oxidoreductase chain F [Coxiella burnetii Dugway
5J108-111]
gi|212010597|gb|ACJ17978.1| NADH-quinone oxidoreductase chain F [Coxiella burnetii CbuG_Q212]
gi|212012479|gb|ACJ19859.1| NADH-quinone oxidoreductase chain F [Coxiella burnetii CbuK_Q154]
Length = 422
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 254/375 (67%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+NE+K+S LRGRGGAGFP+GLKWSF+P+ G Y++ N+DESEPGT KDR+I+R +P
Sbjct: 44 IINEIKESSLRGRGGAGFPTGLKWSFIPRDKPGE-KYVICNSDESEPGTFKDRDILRFNP 102
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H++LEG IA + A+ Y ++RGE+ E+A +A AGL+GKN SG D ++
Sbjct: 103 HQVLEGIAIACYTLGATVGYNFLRGEFWEPFNRCEQALAQAREAGLIGKNVLNSGVDIEI 162
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+ AGAYICGEETAL+ SLEGK+G PR KPPFPAN GLY P+ + N ET A P IL
Sbjct: 163 FNHFSAGAYICGEETALMNSLEGKRGWPRFKPPFPANFGLYERPSNINNTETYASVPVIL 222
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WFA G N GTK+F VSGHV KP E + IP +L+ GG+R G L
Sbjct: 223 EKGGKWFADLGPPKNGGTKIFSVSGHVAKPGNYEVPLGIPFADLLAL-AGGMREG-SELK 280
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + +M +D L S LG+ V+VMD+ST +V + R+S FY
Sbjct: 281 AVIPGGSSMPVLPAEVMMKAIMSFDGLVEAGSMLGSGGVMVMDQSTCMVKVLERISKFYM 340
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCGQCTPCREGTGWL+ ++ R++ G +I+ L V K IEG TICA G+AAAWPV
Sbjct: 341 HESCGQCTPCREGTGWLYRLVHRIEKGEGTKRDIEQLSRVAKGIEGRTICAFGEAAAWPV 400
Query: 459 QGLIRHFRPELERRI 473
G+++HF E E +
Sbjct: 401 SGMLKHFYDEFEYHV 415
>gi|284034164|ref|YP_003384095.1| NADH-quinone oxidoreductase subunit F [Kribbella flavida DSM 17836]
gi|283813457|gb|ADB35296.1| NADH-quinone oxidoreductase, F subunit [Kribbella flavida DSM
17836]
Length = 433
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/379 (53%), Positives = 269/379 (70%), Gaps = 7/379 (1%)
Query: 91 LVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKD 150
L ++ AD +V VK SGLRGRGGAGFP+G+KWSF+P+ + +P YLVVNADESEPGTCKD
Sbjct: 34 LRMQPAD-VVTAVKDSGLRGRGGAGFPTGMKWSFIPQ-DNPKPKYLVVNADESEPGTCKD 91
Query: 151 REIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNAC 210
+M PH L+EG +IA +RAS A+IY+RGE ++ + L++A +EA AAGL+G +
Sbjct: 92 IPLMLASPHTLVEGVIIASYAIRASTAFIYVRGEVLHVIRRLQQAVEEAKAAGLIGTDIL 151
Query: 211 GSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVET 270
GSGYD DV +H GAGAYICGEETALL+SLEG++G+PRL+PPFPA AGLYGCPT + NVE+
Sbjct: 152 GSGYDLDVIVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVES 211
Query: 271 VAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGV 330
+A P I++ G DWF S G + + G L+ +SGHV +P E + I L++L+D GGV
Sbjct: 212 IASVPAIIKNGADWFGSMGTEKSKGMTLYSLSGHVTRPGQYEAPLGITLRQLLDL-AGGV 270
Query: 331 RGGWDNLLAVIPGGSSVPLL-PKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDA 389
R G L PGGSS PLL +H+ DV +DY+ + +V S LGT A+ + D +T VV A
Sbjct: 271 REG-HELKFWTPGGSSTPLLTAEHL--DVPLDYEGVGSVGSMLGTKALQIFDDTTCVVRA 327
Query: 390 IARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICA 449
+ R + FYKHESCG+CTPCREGT WL I+ERL+ G ++++ L ++ I G + CA
Sbjct: 328 VLRWTEFYKHESCGKCTPCREGTWWLVQILERLEAGKGTEQDLETLLDLCDNILGRSFCA 387
Query: 450 LGDAAAWPVQGLIRHFRPE 468
LGD A P+ I++F+ E
Sbjct: 388 LGDGATSPITSSIQYFKDE 406
>gi|190893218|ref|YP_001979760.1| NADH-ubiquinone oxidoreductase subunit F [Rhizobium etli CIAT 652]
gi|190698497|gb|ACE92582.1| NADH-ubiquinone oxidoreductase protein, chain F [Rhizobium etli
CIAT 652]
Length = 421
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/380 (52%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D +++ VK+S LRGRGGAGFP+G+KW F+PK + G+P+YL NADE EPGT KDR IM
Sbjct: 40 DEVIDLVKRSNLRGRGGAGFPTGMKWGFVPKRT-GKPTYLCCNADEGEPGTFKDRIIMER 98
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
DPH+L+EG ++ + A AY+YIRGEYV + LE+A EA+A G LGK GS ++F
Sbjct: 99 DPHQLIEGLAVSAYAIGAETAYVYIRGEYVTAIRRLEQAIAEAHARGYLGKRILGSDFNF 158
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
VHIH GAGAYICGEETA+LESLEGK+ +PRLKPPFPA AGLY PT + NVET+A P
Sbjct: 159 AVHIHCGAGAYICGEETAMLESLEGKRAQPRLKPPFPAVAGLYASPTVINNVETLACVPH 218
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ RG DWF G + G KL+C+SG V KP E M I L+EL++ H GGV G
Sbjct: 219 IVMRGADWFRGIGPDKSPGPKLYCLSGQVRKPGLYELPMGIALRELVENHAGGVLPG-RR 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
+ AVIPGG S P++P+H +V MD+D+L A S LG+A VIV+D ST +V R+ F
Sbjct: 278 IKAVIPGGVSAPVIPEHGL-EVGMDFDSLAAAGSMLGSAGVIVIDDSTCMVKVATRIIEF 336
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
+ HESCG+CTPCREG W+ ++ R++ G+ +++ L + K I G+T CALGD AA
Sbjct: 337 FHHESCGKCTPCREGLNWVVKVLRRIEAGDGAPGDLEQLDMLCKGIFGNTFCALGDGAAM 396
Query: 457 PVQGLIRHFRPELERRIKEH 476
++ + HFR E I++H
Sbjct: 397 GLRAALAHFRAEFVAHIEDH 416
>gi|171316308|ref|ZP_02905529.1| NADH-quinone oxidoreductase, F subunit [Burkholderia ambifaria
MEX-5]
gi|171098534|gb|EDT43335.1| NADH-quinone oxidoreductase, F subunit [Burkholderia ambifaria
MEX-5]
Length = 436
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 272/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLSIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-RKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|255019912|ref|ZP_05291987.1| NADH-ubiquinone oxidoreductase chain F [Acidithiobacillus caldus
ATCC 51756]
gi|254970692|gb|EET28179.1| NADH-ubiquinone oxidoreductase chain F [Acidithiobacillus caldus
ATCC 51756]
Length = 428
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/378 (52%), Positives = 258/378 (68%), Gaps = 3/378 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
+ ++ E+K S LRGRGGAGFP+GLKWSFMPK G YL+ NADE EPGTCKDR+IMR+
Sbjct: 42 EQVIAEMKTSALRGRGGAGFPTGLKWSFMPKGVSG-TKYLLCNADEGEPGTCKDRDIMRY 100
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
+PH+L+EG +I M A A YI+IRGE++ + +E A +EAYAAG LG+ G + F
Sbjct: 101 EPHRLIEGMIIGAYAMGARAGYIFIRGEFIEPIRRVEAALEEAYAAGFLGERILGQEFSF 160
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
D+++H GAGAYICGEETAL+E+LEGK+G+PR KPPFPA+ GLYG PTT+ NVET A P
Sbjct: 161 DLYVHRGAGAYICGEETALMEALEGKKGQPRFKPPFPASYGLYGRPTTINNVETFASVPD 220
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ RG WF G+ NN GTK+F V+G V +P E M P EL+D GG+ G +
Sbjct: 221 IIVRGGQWFLDLGKANNGGTKIFSVTGQVQRPGNYEVPMGTPFPELLD-MAGGLHPG-RS 278
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
L AVIPGG+S +L + MDYD++ S LG +VIV+D S +V + R++ F
Sbjct: 279 LKAVIPGGTSTAMLAGATMMECTMDYDSIAKAGSALGAGSVIVIDDSVCIVRVVERIARF 338
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
Y HESCGQCTPCREG GWLW +M R++ G + ++ID+L V +IEG TICAL D
Sbjct: 339 YMHESCGQCTPCREGMGWLWRVMHRIENGQGRAQDIDLLLNVGARIEGRTICALADGGVA 398
Query: 457 PVQGLIRHFRPELERRIK 474
PV I+ FR E E I+
Sbjct: 399 PVVSSIKLFRDEYEHHIR 416
>gi|29654734|ref|NP_820426.1| NADH dehydrogenase subunit F [Coxiella burnetii RSA 493]
gi|161830422|ref|YP_001597288.1| NADH dehydrogenase (ubiquinone) subunit F [Coxiella burnetii RSA
331]
gi|29542002|gb|AAO90940.1| NADH-quinone oxidoreductase chain F [Coxiella burnetii RSA 493]
gi|161762289|gb|ABX77931.1| NADH dehydrogenase (ubiquinone), F subunit [Coxiella burnetii RSA
331]
Length = 422
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 254/375 (67%), Gaps = 3/375 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
I+NE+K+S LRGRGGAGFP+GLKWSF+P+ G Y++ N+DESEPGT KDR+I+R +P
Sbjct: 44 IINEIKESSLRGRGGAGFPTGLKWSFIPRDKPGE-KYVICNSDESEPGTFKDRDILRFNP 102
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H++LEG IA + A+ Y ++RGE+ E+A +A AGL+GKN SG D ++
Sbjct: 103 HQVLEGIAIACYTLGATVGYNFLRGEFWEPFDRCEQALAQAREAGLIGKNVLNSGVDIEI 162
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H+ AGAYICGEETAL+ SLEGK+G PR KPPFPAN GLY P+ + N ET A P IL
Sbjct: 163 FNHFSAGAYICGEETALMNSLEGKRGWPRFKPPFPANFGLYERPSNINNTETYASVPVIL 222
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
+G WFA G N GTK+F VSGHV KP E + IP +L+ GG+R G L
Sbjct: 223 EKGGKWFADLGPPKNGGTKIFSVSGHVAKPGNYEVPLGIPFADLLAL-AGGMREG-SELK 280
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS+P+LP + +M +D L S LG+ V+VMD+ST +V + R+S FY
Sbjct: 281 AVIPGGSSMPVLPAEVMMKAIMSFDGLVEAGSMLGSGGVMVMDQSTCMVKVLERISKFYM 340
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCGQCTPCREGTGWL+ ++ R++ G +I+ L V K IEG TICA G+AAAWPV
Sbjct: 341 HESCGQCTPCREGTGWLYRLVHRIEKGEGTKRDIEQLSRVAKGIEGRTICAFGEAAAWPV 400
Query: 459 QGLIRHFRPELERRI 473
G+++HF E E +
Sbjct: 401 SGMLKHFYDEFEYHV 415
>gi|402565960|ref|YP_006615305.1| NADH-quinone oxidoreductase subunit F [Burkholderia cepacia GG4]
gi|402247157|gb|AFQ47611.1| NADH-quinone oxidoreductase, F subunit [Burkholderia cepacia GG4]
Length = 436
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 272/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLTIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-RKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|332285012|ref|YP_004416923.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Pusillimonas
sp. T7-7]
gi|330428965|gb|AEC20299.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Pusillimonas
sp. T7-7]
Length = 455
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/404 (50%), Positives = 261/404 (64%), Gaps = 5/404 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + ++ G D ++ EVK S LRGRGGAGFP+GLKWSFMP+ G+
Sbjct: 48 LEDYVKRGGYEALRKILTTGMTPDDVIAEVKASSLRGRGGAGFPTGLKWSFMPRTLPGQ- 106
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R +PH ++EG IA M + Y YI GE + E
Sbjct: 107 KYLVCNSDEGEPGTFKDRDILRFNPHIVIEGMAIAAYAMGITVGYNYIHGEIFEIYERFE 166
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A ++A AAG LG GS + F +H +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 167 EALEQARAAGFLGDKILGSEFSFQLHAFHGYGAYICGEETALLESLEGKKGQPRFKPPFP 226
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P I R + G N GTKLF +SG V P E
Sbjct: 227 ASFGLYGKPTTINNTETFAAVPWIFRHSAQEYLDIGVANAGGTKLFSISGDVELPGNYEI 286
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P +L++ GG+RGG L AVIPGGSS P+LP I MDYD++ S LG
Sbjct: 287 PLGTPFSKLLEL-AGGMRGG-RKLKAVIPGGSSAPVLPAEIMMQTNMDYDSIAKAGSMLG 344
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCREGTGWL+ ++ R++ G + E++D
Sbjct: 345 SGAVIVMDETRCMVKSLLRLSYFYFEESCGQCTPCREGTGWLYRMLARIENGQGRPEDLD 404
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 477
+L V I G TICALGDAAA PV+ I+HFR E I+ +
Sbjct: 405 VLDSVAHNIMGRTICALGDAAAMPVRSFIKHFRDEFAHHIEHKS 448
>gi|312200062|ref|YP_004020123.1| NADH-quinone oxidoreductase subunit F [Frankia sp. EuI1c]
gi|311231398|gb|ADP84253.1| NADH-quinone oxidoreductase, F subunit [Frankia sp. EuI1c]
Length = 436
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 263/400 (65%), Gaps = 6/400 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSY 135
L+ + G + + G D ++ VK SGLRGRGGAGFP+G+KWSF+P+ DG+P Y
Sbjct: 19 LETYAEHGGYSSVQAAFNLGPDAVIKMVKDSGLRGRGGAGFPTGMKWSFIPQ-GDGKPHY 77
Query: 136 LVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERA 195
LVVNADE EPGTCKD +M DPH L+EG ++A +RA+ AY+Y+RGE ++ + L A
Sbjct: 78 LVVNADEGEPGTCKDAPLMMTDPHSLIEGIIVASFAVRANRAYVYVRGELIHAARRLRNA 137
Query: 196 RQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPAN 255
EAY AG LG N GSG+D D+ IH GAGAYICGEETALL+SLEG++G+PRL+PPFPA
Sbjct: 138 VAEAYRAGYLGTNILGSGFDLDLVIHSGAGAYICGEETALLDSLEGRRGQPRLRPPFPAT 197
Query: 256 AGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEM 315
GLY PT + NVET+A P I+ G +WF S G + + G K++ +SGHV +P E M
Sbjct: 198 HGLYNSPTVINNVETIASVPFIVNNGVEWFRSMGTEKSPGPKIYSLSGHVTRPGQYEAPM 257
Query: 316 SIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLL-PKHICDDVLMDYDALKAVQSGLGT 374
L+EL++ GGVRGG L A PGGSS P+L +H+ DV +D+D + A S LGT
Sbjct: 258 GTTLRELLEL-AGGVRGG-RALKAWTPGGSSTPMLTAEHL--DVPLDFDGVAAAGSLLGT 313
Query: 375 AAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDM 434
AA+++MD + D+V + RL+ FY HESCG+CTPCREGT WL I+ R++ G +ID
Sbjct: 314 AALMIMDDTVDMVPVVRRLTQFYAHESCGKCTPCREGTPWLVQILSRMERGQGDPRDIDT 373
Query: 435 LQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
L + I G CAL D A P+ I+HF E K
Sbjct: 374 LTDACDNIFGRAFCALADGAVSPIVSGIKHFPEEFAAAAK 413
>gi|206560698|ref|YP_002231463.1| NADH dehydrogenase I chain F [Burkholderia cenocepacia J2315]
gi|444359658|ref|ZP_21160955.1| NADH oxidoreductase (quinone), F subunit [Burkholderia cenocepacia
BC7]
gi|198036740|emb|CAR52640.1| NADH dehydrogenase I chain F [Burkholderia cenocepacia J2315]
gi|443601615|gb|ELT69752.1| NADH oxidoreductase (quinone), F subunit [Burkholderia cenocepacia
BC7]
Length = 436
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/425 (48%), Positives = 272/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N GS + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGSEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLSIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFAVLMEL-AGGMRGG-KKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|167562182|ref|ZP_02355098.1| NADH-quinone oxidoreductase, F subunit [Burkholderia oklahomensis
EO147]
Length = 436
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/425 (48%), Positives = 273/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLTGENWH-LEDYVARGGYAQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A +EA AG LG + GSG+ F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALEEARRAGFLGDDIMGSGFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLAVGPQNYLEMG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|451936590|ref|YP_007460444.1| NADH dehydrogenase I subunit F [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777513|gb|AGF48488.1| NADH dehydrogenase I subunit F [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 455
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/379 (51%), Positives = 255/379 (67%), Gaps = 3/379 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++E+K SGLRGRGGAGFP+GLKWSFM S+ YLV N+DE EPGT KDR+I+R +P
Sbjct: 73 VISEIKSSGLRGRGGAGFPTGLKWSFMTP-SNHDQKYLVCNSDEGEPGTFKDRDILRFNP 131
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H ++EG +IA M+ S Y YI GE + K E A EA AG LG+N + F +
Sbjct: 132 HIVIEGMIIAAYAMKISVGYNYIHGEIFDVYKRFEIAINEAREAGFLGENILNQDFSFQL 191
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
+ +G GAYICGEETALLESLEGK+G+PR KPPFPAN GLYG PTT+ N ET A P I+
Sbjct: 192 YAAHGYGAYICGEETALLESLEGKKGQPRFKPPFPANNGLYGKPTTINNTETFAAVPWII 251
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
G D + G+ NN+GTK+F +SG V P E + P ++++ GGVR G + L
Sbjct: 252 LNGSDKYLEIGKPNNNGTKIFSISGDVKFPGNYEVPLGTPFLKILEL-AGGVRNG-NRLK 309
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSS P+LP I ++ MDYD+L S LG+ A+IV+D + +V ++ RLSYFY
Sbjct: 310 AVIPGGSSSPVLPADIIMNLDMDYDSLSKAGSMLGSGAIIVLDDTRCMVKSLLRLSYFYY 369
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCGQCTPCREGTGWL+ ++ R++ LE+I++L + I G TICALGDAAA PV
Sbjct: 370 EESCGQCTPCREGTGWLYRVLNRIENSKGNLEDIELLDSIANNIMGRTICALGDAAAMPV 429
Query: 459 QGLIRHFRPELERRIKEHA 477
++HF PE + I+ +
Sbjct: 430 ISFLKHFNPEFKHHIEHKS 448
>gi|339627152|ref|YP_004718795.1| NADH-quinone oxidoreductase subunit F [Sulfobacillus acidophilus
TPY]
gi|339284941|gb|AEJ39052.1| NADH-quinone oxidoreductase, F subunit [Sulfobacillus acidophilus
TPY]
Length = 424
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/378 (51%), Positives = 264/378 (69%), Gaps = 4/378 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+V+ VK+SGLRGRGGAGFP+G+KW F+PK DGRP YLVVN+DE+EPGT KDRE++ H+P
Sbjct: 37 LVDLVKRSGLRGRGGAGFPTGVKWGFLPK--DGRPRYLVVNSDEAEPGTFKDRELIEHNP 94
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG +IA + A AY+Y+RGE++ + L RA +EAYA G LG+ GS + D+
Sbjct: 95 HQLIEGMIIASYAIGAREAYVYVRGEFLRGAEQLRRAVREAYAHGFLGERILGSDFSLDI 154
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H++ GAGAYICGEE+ALLESLEGK+G PRLKPPFPA AGLYG PT V NVET+ P I+
Sbjct: 155 HVYRGAGAYICGEESALLESLEGKRGNPRLKPPFPAVAGLYGLPTIVNNVETICNVPPIV 214
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
G +W+ S G + + G K+ VSG V +P E ++ PL+ L++ + GG+ G+ +
Sbjct: 215 MYGAEWYTSMGTEKSPGIKIMSVSGKVRRPGNYEVPLATPLRTLLEEYAGGMLPGY-QIK 273
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVPLL D L DY+++ A + LG+ IV+D T +V A ARL FY+
Sbjct: 274 AVIPGGSSVPLLTADQLDTPL-DYESMMAAGTMLGSGGCIVLDDQTCIVKAAARLVKFYR 332
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCG+CTPCREGT W+ ++ER++ G + +++ +L ++ I G + C LGDAA +
Sbjct: 333 EESCGKCTPCREGTYWMTDVLERIEAGLGEADDLTVLLDIADNISGKSFCPLGDAALGFM 392
Query: 459 QGLIRHFRPELERRIKEH 476
++HFR E E I+EH
Sbjct: 393 VSAVKHFREEFEAHIREH 410
>gi|379008465|ref|YP_005257916.1| NADH dehydrogenase subunit F [Sulfobacillus acidophilus DSM 10332]
gi|361054727|gb|AEW06244.1| NADH dehydrogenase subunit F [Sulfobacillus acidophilus DSM 10332]
Length = 431
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/378 (51%), Positives = 264/378 (69%), Gaps = 4/378 (1%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+V+ VK+SGLRGRGGAGFP+G+KW F+PK DGRP YLVVN+DE+EPGT KDRE++ H+P
Sbjct: 44 LVDLVKRSGLRGRGGAGFPTGVKWGFLPK--DGRPRYLVVNSDEAEPGTFKDRELIEHNP 101
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG +IA + A AY+Y+RGE++ + L RA +EAYA G LG+ GS + D+
Sbjct: 102 HQLIEGMIIASYAIGAREAYVYVRGEFLRGAEQLRRAVREAYAHGFLGERILGSDFSLDI 161
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
H++ GAGAYICGEE+ALLESLEGK+G PRLKPPFPA AGLYG PT V NVET+ P I+
Sbjct: 162 HVYRGAGAYICGEESALLESLEGKRGNPRLKPPFPAVAGLYGLPTIVNNVETICNVPPIV 221
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
G +W+ S G + + G K+ VSG V +P E ++ PL+ L++ + GG+ G+ +
Sbjct: 222 MYGAEWYTSMGTEKSPGIKIMSVSGKVRRPGNYEVPLATPLRTLLEEYAGGMLPGY-QIK 280
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGGSSVPLL D L DY+++ A + LG+ IV+D T +V A ARL FY+
Sbjct: 281 AVIPGGSSVPLLTADQLDTPL-DYESMMAAGTMLGSGGCIVLDDQTCIVKAAARLVKFYR 339
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
ESCG+CTPCREGT W+ ++ER++ G + +++ +L ++ I G + C LGDAA +
Sbjct: 340 EESCGKCTPCREGTYWMTDVLERIEAGLGEADDLTVLLDIADNISGKSFCPLGDAALGFM 399
Query: 459 QGLIRHFRPELERRIKEH 476
++HFR E E I+EH
Sbjct: 400 VSAVKHFREEFEAHIREH 417
>gi|218515777|ref|ZP_03512617.1| NADH-ubiquinone oxidoreductase protein, chain F [Rhizobium etli
8C-3]
Length = 446
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/434 (47%), Positives = 280/434 (64%), Gaps = 6/434 (1%)
Query: 45 PPPPPPEKTHFGGLKDEDRIFTNLYGMHDPFLKGAMKRGDWHRTKDLVLK--GADWIVNE 102
P P P++ + E + N+ + D L + G ++ VL+ D +++
Sbjct: 12 PAPISPQQHRENSVMFEPILLKNV-DVRDGHLLSTFEAGGGYQALAKVLRENTPDEVIDL 70
Query: 103 VKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLL 162
VK+S LRGRGGAGFP+G+KW F+PK + G+P+YL NADE EPGT KDR IM DPH+L+
Sbjct: 71 VKRSNLRGRGGAGFPTGMKWGFVPKRT-GKPTYLCCNADEGEPGTFKDRIIMERDPHQLI 129
Query: 163 EGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHY 222
EG ++ + A AY+YIRGEYV + LE+A EA+A G LGK GS ++F V IH
Sbjct: 130 EGLAVSAYAIGAETAYVYIRGEYVTAIRRLEQAIAEAHAKGYLGKRILGSDFNFAVRIHC 189
Query: 223 GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGP 282
GAGAYICGEETA+LESLEGK+ +PRLKPPFPA AGLY PT + NVET+A P I+ RG
Sbjct: 190 GAGAYICGEETAMLESLEGKRAQPRLKPPFPAVAGLYASPTVINNVETLACVPHIVMRGA 249
Query: 283 DWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIP 342
DWF G + + G KL+C+SG V KP E M I L+EL++ H GGV G + AVIP
Sbjct: 250 DWFRGIGPEKSPGPKLYCLSGQVRKPGLYELPMGIALRELVENHAGGVLPG-RRIKAVIP 308
Query: 343 GGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESC 402
GG S P++P+H +V MD+D+L A S LG+A VIV+D ST +V R+ F+ HESC
Sbjct: 309 GGVSAPVIPEHGL-EVGMDFDSLAAAGSMLGSAGVIVIDDSTCMVKVATRIVEFFHHESC 367
Query: 403 GQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI 462
G+CTPCREG W+ ++ R++ G+ +++ L + K I G+T CALGD AA ++ +
Sbjct: 368 GKCTPCREGLNWVVKVLRRIEAGDGAPGDLEQLDMLCKGIFGNTFCALGDGAAMGLRAAL 427
Query: 463 RHFRPELERRIKEH 476
HFR E I +H
Sbjct: 428 AHFRAEFVAHIDDH 441
>gi|417104239|ref|ZP_11961420.1| NADH-ubiquinone oxidoreductase protein, chain F [Rhizobium etli
CNPAF512]
gi|327191026|gb|EGE58080.1| NADH-ubiquinone oxidoreductase protein, chain F [Rhizobium etli
CNPAF512]
Length = 421
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/380 (52%), Positives = 261/380 (68%), Gaps = 3/380 (0%)
Query: 97 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRH 156
D +++ VK+S LRGRGGAGFP+G+KW F+PK + G+P+YL NADE EPGT KDR IM
Sbjct: 40 DEVIDLVKRSNLRGRGGAGFPTGMKWGFVPKRT-GKPTYLCCNADEGEPGTFKDRIIMER 98
Query: 157 DPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDF 216
DPH+L+EG ++ + A AY+YIRGEYV + LE+A EA+A G LGK GS ++F
Sbjct: 99 DPHQLIEGLAVSAYAIGAETAYVYIRGEYVTAIRRLEQAIAEAHARGYLGKRILGSDFNF 158
Query: 217 DVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPT 276
VHIH GAGAYICGEETA+LESLEGK+ +PRLKPPFPA AGLY PT + NVET+A P
Sbjct: 159 AVHIHCGAGAYICGEETAMLESLEGKRAQPRLKPPFPAVAGLYASPTVINNVETLACVPH 218
Query: 277 ILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDN 336
I+ RG DWF G + G KL+C+SG V KP E M I L++L++ H GGV G
Sbjct: 219 IVMRGADWFRGIGPDKSPGPKLYCLSGQVRKPGLYELPMGIALRDLVENHAGGVLPG-RR 277
Query: 337 LLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYF 396
+ AVIPGG S P++P+H +V MD+D+L A S LG+A VIV+D ST +V R+ F
Sbjct: 278 IKAVIPGGVSAPVIPEHGL-EVRMDFDSLAAAGSMLGSAGVIVIDDSTCMVKVATRIIEF 336
Query: 397 YKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAW 456
+ HESCG+CTPCREG W+ ++ R++ G+ +++ L + K I G+T CALGD AA
Sbjct: 337 FHHESCGKCTPCREGLNWVVKVLRRIEAGDGAPGDLEQLDMLCKGIFGNTFCALGDGAAM 396
Query: 457 PVQGLIRHFRPELERRIKEH 476
++ + HFR E I++H
Sbjct: 397 GLRAALAHFRAEFVAHIQDH 416
>gi|424896831|ref|ZP_18320405.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393181058|gb|EJC81097.1| NADH-quinone oxidoreductase, F subunit [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 421
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 258/377 (68%), Gaps = 3/377 (0%)
Query: 99 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDP 158
+++ VK+S LRGRGGAGFP+G+KWSF+PK D +P YL NADE EPGT KDR IM DP
Sbjct: 42 VIDLVKQSNLRGRGGAGFPTGMKWSFVPKQVD-KPKYLCCNADEGEPGTFKDRIIMERDP 100
Query: 159 HKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDV 218
H+L+EG ++ + A AY+YIRGEYV + LE+A EA+ G LG GS +DF V
Sbjct: 101 HQLIEGLAVSAYAIGAKTAYVYIRGEYVTAIRRLEQAIAEAHEKGYLGTGILGSNFDFAV 160
Query: 219 HIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIL 278
HIH GAGAYICGEETA+LESLEGK+ +PRLKPPFPA AGLY PT + NVET+A P I+
Sbjct: 161 HIHCGAGAYICGEETAMLESLEGKRAQPRLKPPFPAVAGLYASPTVINNVETLACVPHIV 220
Query: 279 RRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLL 338
RG DWF G + G KL+C+SG V KP E M IPL+EL++ H GG G +
Sbjct: 221 ARGADWFRGIGPDKSPGPKLYCLSGQVRKPGLYELPMGIPLRELVEEHAGGALPG-RKIK 279
Query: 339 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYK 398
AVIPGG S P++P+H DV+MD+D+L A S LG+A VIV+D ST +V R+ F+
Sbjct: 280 AVIPGGVSAPVIPEHGL-DVMMDFDSLAAAGSMLGSAGVIVIDDSTCMVKVATRIIEFFH 338
Query: 399 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 458
HESCG+CTPCREG W+ ++ R++ G+ +++ L+ + K I G+T CALGD AA +
Sbjct: 339 HESCGKCTPCREGLNWVVKVLRRVEGGDGAPGDLEQLEMLCKGIFGNTFCALGDGAAMGL 398
Query: 459 QGLIRHFRPELERRIKE 475
+ + HFR E ++E
Sbjct: 399 RAALAHFRDEFVAHVEE 415
>gi|107023183|ref|YP_621510.1| NADH-quinone oxidoreductase subunit F [Burkholderia cenocepacia AU
1054]
gi|116690265|ref|YP_835888.1| NADH-quinone oxidoreductase subunit F [Burkholderia cenocepacia
HI2424]
gi|105893372|gb|ABF76537.1| NADH dehydrogenase subunit F [Burkholderia cenocepacia AU 1054]
gi|116648354|gb|ABK08995.1| NADH dehydrogenase subunit F [Burkholderia cenocepacia HI2424]
Length = 436
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/425 (48%), Positives = 272/425 (64%), Gaps = 19/425 (4%)
Query: 65 FTNLYGMH-DPFLKGAMKRGDWHRTKDLVLKGA--------------DWIVNEVKKSGLR 109
T+L+ H P + + +WH +D V +G + ++ +VK SGLR
Sbjct: 1 MTSLHDRHIKPLILAGLNGENWH-LEDYVARGGYKQLRRILEEKIPPEQVIADVKASGLR 59
Query: 110 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 169
GRGGAGFP+GLKWSFMP+ G+ YLV N+DE EPGT KDR+I+R +PH L+EG I
Sbjct: 60 GRGGAGFPTGLKWSFMPRQFPGQ-KYLVCNSDEGEPGTFKDRDILRWNPHALIEGMAIGA 118
Query: 170 VGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYIC 229
M + Y YI GE + E A EA AAG LG N G+ + F +H H+G GAYIC
Sbjct: 119 YAMGITVGYNYIHGEIFEVYRRFEAALDEARAAGFLGDNIMGTEFSFQLHAHHGYGAYIC 178
Query: 230 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 289
GEETALLESLEGK+G+PR KPPFPA+ G+YG PTT+ N ET A P +L GP + G
Sbjct: 179 GEETALLESLEGKKGQPRFKPPFPASFGVYGKPTTINNTETFAAVPFLLSIGPQNYLEIG 238
Query: 290 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPL 349
+ NN GTK+F VSG V +P E + P L++ GG+RGG + AVIPGGSS P+
Sbjct: 239 KPNNGGTKIFSVSGDVERPGNYEVPLGTPFATLMEL-AGGMRGG-KKIKAVIPGGSSAPV 296
Query: 350 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 409
+P I +DYD++ S LG+ AVIVMD++ +V ++ RLSYFY ESCGQCTPCR
Sbjct: 297 IPGDIMMQTDLDYDSIAKAGSMLGSGAVIVMDETRCMVRSLLRLSYFYYEESCGQCTPCR 356
Query: 410 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 469
EGTGWL+ ++ R++ G + E++D+L V + I G TICALGDAAA PV+G+++H+ E
Sbjct: 357 EGTGWLYRVVNRIEHGEGRQEDLDLLNSVAENIMGRTICALGDAAAMPVRGMLKHYWDEF 416
Query: 470 ERRIK 474
++
Sbjct: 417 AYHVE 421
>gi|424776532|ref|ZP_18203513.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Alcaligenes
sp. HPC1271]
gi|422888352|gb|EKU30741.1| respiratory-chain NADH dehydrogenase, 51 kDa subunit [Alcaligenes
sp. HPC1271]
Length = 455
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 263/401 (65%), Gaps = 5/401 (1%)
Query: 76 LKGAMKRGDWHRTKDLVLKGA--DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRP 133
L+ +KRG + + ++ G + ++ EVK S LRGRGGAGFPSGLKWSFMP+ G+
Sbjct: 48 LEEYVKRGGYEALRKVLTTGMKPEDVIAEVKTSALRGRGGAGFPSGLKWSFMPRSLPGQ- 106
Query: 134 SYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLE 193
YLV N+DE EPGT KDR+I+R +PH ++EG IA M + Y YI GE + E
Sbjct: 107 KYLVCNSDEGEPGTFKDRDILRFNPHIVIEGMAIAAYAMGITVGYNYIHGEVFEIYQRFE 166
Query: 194 RARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFP 253
A ++A AAG LG GS + F +H +G GAYICGEETALLESLEGK+G+PR KPPFP
Sbjct: 167 EALEQARAAGFLGDKILGSDFSFQLHAFHGYGAYICGEETALLESLEGKKGQPRFKPPFP 226
Query: 254 ANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEE 313
A+ GLYG PTT+ N ET A P ILR + G N GTK+F ++G V +P E
Sbjct: 227 ASFGLYGKPTTINNTETFAAVPWILRNSGQEYLEVGIPNAGGTKIFSITGDVERPGNYEV 286
Query: 314 EMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLG 373
+ P L++ GG+R G L AVIPGGSS P+LP I +DYD++ S LG
Sbjct: 287 PLGTPFATLLEL-AGGMRDG-RKLKAVIPGGSSSPVLPADIIMATNLDYDSIAKAGSMLG 344
Query: 374 TAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEID 433
+ AVIVMD++ +V ++ RLSYFY HESCGQCTPCREGTGWLW ++ R++ G + E++D
Sbjct: 345 SGAVIVMDETRCMVKSLLRLSYFYYHESCGQCTPCREGTGWLWRMVHRIENGQGRPEDLD 404
Query: 434 MLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
ML ++ + I G TICALGDAAA PV+ ++HFR E I+
Sbjct: 405 MLDDIAQNIMGRTICALGDAAAMPVRSFVKHFRDEFAHHIE 445
>gi|66219967|gb|AAY43000.1| Nqo1 [Rhodothermus marinus]
Length = 443
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/393 (51%), Positives = 270/393 (68%), Gaps = 6/393 (1%)
Query: 86 HRTKDLVLKGADW----IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNAD 141
++T VL W ++ EVKKS LRGRGGAGFP+GLKWSFMP V D RP +L N D
Sbjct: 39 YQTLREVLTSDRWDPKSVIEEVKKSKLRGRGGAGFPTGLKWSFMPPVDD-RPRFLCCNGD 97
Query: 142 ESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYA 201
ESEPGT KDR++M +PH++ EG LIA M Y+Y+RGE+ +++ER ++ YA
Sbjct: 98 ESEPGTFKDRQLMEFNPHQIFEGILIACYAMSVRTCYLYVRGEFARWIEHMERELEKLYA 157
Query: 202 AGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGC 261
G +GKN G+ + D+ IH GAGAYICGEE++L+ES+EGK+ PR+KPPFPA GL+G
Sbjct: 158 KGYVGKNIMGTDFSADIVIHKGAGAYICGEESSLMESVEGKRAYPRIKPPFPAQRGLWGY 217
Query: 262 PTTVTNVETVAVSPTILRRGPDWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKE 321
PTT+ NVET+A P ILR G +WFAS G N+ G L+ +SGHVN+P E + + +
Sbjct: 218 PTTINNVETLANVPLILRNGGEWFASIGAPNHPGPVLYGISGHVNRPGVYEYPTGMLITD 277
Query: 322 LIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMD 381
LI GG+RGG L AVIPGGSS P L + D V MD ++L+ S +GTA ++V+D
Sbjct: 278 LIYEVAGGIRGG-KKLKAVIPGGSSTPPLRADMIDGVTMDAESLREAGSMMGTAGLLVLD 336
Query: 382 KSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQ 441
+ TD+V + R+++FY HESCGQCTPCREGTGWL I+ R++ G +L ++D+L ++ Q
Sbjct: 337 EDTDMVSWLRRVAHFYAHESCGQCTPCREGTGWLENILTRIEEGEGRLRDLDLLLDLCDQ 396
Query: 442 IEGHTICALGDAAAWPVQGLIRHFRPELERRIK 474
+EG T+CAL DAAAWPV+ I FR E E R K
Sbjct: 397 MEGRTVCALADAAAWPVRYTILRFREEFEARCK 429
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,590,605,819
Number of Sequences: 23463169
Number of extensions: 407262677
Number of successful extensions: 2207616
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3763
Number of HSP's successfully gapped in prelim test: 1690
Number of HSP's that attempted gapping in prelim test: 2193490
Number of HSP's gapped (non-prelim): 5928
length of query: 486
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 339
effective length of database: 8,910,109,524
effective search space: 3020527128636
effective search space used: 3020527128636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)