Your job contains 1 sequence.
>011429
MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSL
PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL
DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL
FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE
VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY
ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH
KCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSH
GAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT
TDVSFS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011429
(486 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033734 - symbol:ABCI7 "AT1G32500" species:370... 1499 1.1e-153 1
UNIPROTKB|Q60A79 - symbol:sufD "FeS assembly protein SufD... 321 5.6e-34 2
UNIPROTKB|Q83BX9 - symbol:sufD "SufD" species:227377 "Cox... 334 3.0e-30 1
TIGR_CMR|CBU_1358 - symbol:CBU_1358 "conserved hypothetic... 334 3.0e-30 1
UNIPROTKB|P77689 - symbol:sufD "SufD component of SufBCD ... 327 1.6e-29 1
TIGR_CMR|SPO_2017 - symbol:SPO_2017 "FeS assembly protein... 232 2.9e-17 2
GENEDB_PFALCIPARUM|PF11_0044 - symbol:PF11_0044 "hypothet... 233 6.8e-16 1
UNIPROTKB|Q8IIW9 - symbol:PF11_0044 "Iron-sulfur assembly... 233 6.8e-16 1
UNIPROTKB|O53153 - symbol:MT1509 "UPF0051 protein Rv1462/... 209 2.9e-14 1
UNIPROTKB|P67125 - symbol:MT1508 "UPF0051 protein Rv1461/... 191 8.9e-11 2
UNIPROTKB|Q81XL8 - symbol:sufD "Uncharacterized protein" ... 170 9.2e-10 1
TIGR_CMR|BA_5216 - symbol:BA_5216 "FeS assembly protein S... 170 9.2e-10 1
TAIR|locus:2138947 - symbol:ABCI8 "AT4G04770" species:370... 169 1.9e-09 1
UNIPROTKB|Q81XM1 - symbol:sufB "FeS assembly protein SufB... 160 1.4e-08 1
TIGR_CMR|BA_5213 - symbol:BA_5213 "FeS assembly protein S... 160 1.4e-08 1
UNIPROTKB|Q71X17 - symbol:sufB "FeS assembly protein SufB... 155 5.0e-08 1
UNIPROTKB|Q71X14 - symbol:sufD "FeS assembly protein SufD... 149 2.0e-07 1
TIGR_CMR|SPO_2023 - symbol:SPO_2023 "FeS assembly protein... 129 4.3e-05 1
TAIR|locus:504954963 - symbol:ABCI9 "ATP-binding cassette... 125 0.00024 2
>TAIR|locus:2033734 [details] [associations]
symbol:ABCI7 "AT1G32500" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA;RCA;IDA] [GO:0006810
"transport" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009536 "plastid" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006569 "tryptophan catabolic
process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
process" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0005215
GO:GO:0009793 GO:GO:0016226 GO:GO:0010027 EMBL:AC007767
EMBL:AY086585 IPI:IPI00547429 PIR:D86450 RefSeq:NP_564404.1
UniGene:At.40131 ProteinModelPortal:Q9LQK7 IntAct:Q9LQK7
STRING:Q9LQK7 PaxDb:Q9LQK7 PRIDE:Q9LQK7 EnsemblPlants:AT1G32500.1
GeneID:840144 KEGG:ath:AT1G32500 TAIR:At1g32500 eggNOG:COG0719
HOGENOM:HOG000069115 InParanoid:Q9LQK7 KO:K09015 OMA:LSTPWPS
PhylomeDB:Q9LQK7 ProtClustDB:CLSN2688204 Genevestigator:Q9LQK7
GermOnline:AT1G32500 TIGRFAMs:TIGR01981 Uniprot:Q9LQK7
Length = 475
Score = 1499 (532.7 bits), Expect = 1.1e-153, P = 1.1e-153
Identities = 296/469 (63%), Positives = 350/469 (74%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDXXXXXXXXXXXXXX 72
N++ PKL RR + V Q A+FSDPFV+QLAESLED
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVRAQ-----ASFSDPFVLQLAESLEDSLSASPSSSLPLQ- 68
Query: 73 XXKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 69 --RIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXX 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPR
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVG 246
Query: 250 XXXNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQE S YELVEVSTGG
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGG 306
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
KL RHNVHVQQLGPDT TEL++FH+ V++QT DLHS+++LDHPRG RQLHKCIVAHS G
Sbjct: 307 KLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSG 366
Query: 370 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 429
QAVFDGNV+VNR+AQQT+AGQLTRSLLL+PRATVN+KPNLQIIADDVKCSHGAAISDLEE
Sbjct: 367 QAVFDGNVRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEE 426
Query: 430 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLM 478
QLFYFQARGIDLETAR+AL+ SFG+EVIE+FP IR+Q +HVK L+
Sbjct: 427 DQLFYFQARGIDLETARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 475
>UNIPROTKB|Q60A79 [details] [associations]
symbol:sufD "FeS assembly protein SufD" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000825
InterPro:IPR011542 Pfam:PF01458 GO:GO:0016226 HOGENOM:HOG000069115
KO:K09015 TIGRFAMs:TIGR01981 EMBL:AE017282
GenomeReviews:AE017282_GR OMA:AQKTNAY RefSeq:YP_113468.1
ProteinModelPortal:Q60A79 GeneID:3102947 KEGG:mca:MCA0990
PATRIC:22605782 Uniprot:Q60A79
Length = 434
Score = 321 (118.1 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 77/208 (37%), Positives = 113/208 (54%)
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI--KWTAVRQETASGYELVEVSTGGKLSR 313
Y V ++ + G + H LQ A H + V ++ G+ L+ S GG L R
Sbjct: 212 YLGAVVNQIEVADNGGLNHYKLQLDGGRAYHFGGSYARVARDGRFGHHLL--SLGGLLVR 269
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 373
+ VH + LG +TE++ L + Q D H R+ D P G R ++ I+ + VF
Sbjct: 270 NEVHAR-LGHAAQTEMNGVFLSENRQHVDNHIRVDHDEPHGSSRVSYRGIL-EDRSRGVF 327
Query: 374 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 433
G + V+ AQ+TDA R+LLL A ++ KP L+I ADDVKC+HG I L+ +F
Sbjct: 328 QGRIVVHADAQKTDAEMNNRNLLLSDDAEIDTKPQLEIHADDVKCAHGVTIGQLDPDSVF 387
Query: 434 YFQARGIDLETARKALVFSFGAEVIERF 461
Y ++RGID TAR+ L F+F AE++ERF
Sbjct: 388 YLESRGIDAATAREMLTFAFAAEIVERF 415
Score = 64 (27.6 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 34/138 (24%), Positives = 55/138 (39%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSA 142
+PS +DE +R+T + I+ T + + ++ A SLV +DG
Sbjct: 40 FPSPRDEEWRYTHVAPIERKLFTAATGSADTDAAEALIESCRIADAWSLVFVDGMFVPGL 99
Query: 143 LNLSNLPDGVYV---GSLLGVS--DGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVI 195
LP GV + SLL +S DG + + D F N D V+
Sbjct: 100 SERHGLPAGVTLESLASLLALSEADGNAAWLESGLERETESDRHGFLDFNTAFFTDGAVL 159
Query: 196 YVPAGCKVENPIYLKYLS 213
+ G +E P+ L ++S
Sbjct: 160 RLEEGVALEKPVQLFFVS 177
>UNIPROTKB|Q83BX9 [details] [associations]
symbol:sufD "SufD" species:227377 "Coxiella burnetii RSA
493" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458
GO:GO:0016226 HOGENOM:HOG000069115 KO:K09015 TIGRFAMs:TIGR01981
EMBL:AE016828 GenomeReviews:AE016828_GR OMA:AQKTNAY
RefSeq:NP_820347.1 HSSP:P77689 ProteinModelPortal:Q83BX9
PRIDE:Q83BX9 GeneID:1209264 KEGG:cbu:CBU_1358 PATRIC:17931459
ProtClustDB:CLSK914727 BioCyc:CBUR227377:GJ7S-1348-MONOMER
Uniprot:Q83BX9
Length = 426
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 110/404 (27%), Positives = 180/404 (44%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS---LVLIDGFI 138
+T L +P RK E +++T+ + I ++ D++ D P LV I+G
Sbjct: 28 KTFLLHGFPHRKVENWKYTNVTPIAEQAFS--FGENTDTDIA-DFILPDAYRLVFINGHF 84
Query: 139 QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
+LS LP V + SL + I ++ ++Q F +N D + VP
Sbjct: 85 APRLSDLSGLPSAVQMTSLKNIQRDIQNELA-IKKDYQTA--FSLMNDALFQDGLFLQVP 141
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXNDCYWA 258
C +E PI+L +LS + L +S R Y+
Sbjct: 142 KDCYLEKPIHLIHLSKP-----TASLTMSQIRHVILLEENAKAVIFEEYQGTN-GVAYFN 195
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
N V ++ + + LQ + A HI T++ Q S ++ G +LSR +++
Sbjct: 196 NVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRHSQVTSGHIAMGSELSRDDLNY 255
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 376
+L F+ L D H+R+ DH +C +Q +K ++A +AVF+G
Sbjct: 256 SLDEAGASCQLLGFYYLNDGCHVDNHTRI--DHRVSHCTSQQNYKGVLADK-SRAVFNGK 312
Query: 377 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 436
+ V A+QT A Q ++L+L A V+ KP L+I DDVKC+HGA + L E +FY Q
Sbjct: 313 IIVQPNAKQTSAHQTNKNLILSSDAEVDTKPELEIYNDDVKCTHGATVGQLNEEAIFYLQ 372
Query: 437 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 480
+RGI+ A L +F EV+E P I +++ V + + T
Sbjct: 373 SRGINRGAAEHLLTCAFANEVVEMLPNKVIADRIQQLVTDRLAT 416
>TIGR_CMR|CBU_1358 [details] [associations]
symbol:CBU_1358 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458 GO:GO:0016226
HOGENOM:HOG000069115 KO:K09015 TIGRFAMs:TIGR01981 EMBL:AE016828
GenomeReviews:AE016828_GR OMA:AQKTNAY RefSeq:NP_820347.1
HSSP:P77689 ProteinModelPortal:Q83BX9 PRIDE:Q83BX9 GeneID:1209264
KEGG:cbu:CBU_1358 PATRIC:17931459 ProtClustDB:CLSK914727
BioCyc:CBUR227377:GJ7S-1348-MONOMER Uniprot:Q83BX9
Length = 426
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 110/404 (27%), Positives = 180/404 (44%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS---LVLIDGFI 138
+T L +P RK E +++T+ + I ++ D++ D P LV I+G
Sbjct: 28 KTFLLHGFPHRKVENWKYTNVTPIAEQAFS--FGENTDTDIA-DFILPDAYRLVFINGHF 84
Query: 139 QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
+LS LP V + SL + I ++ ++Q F +N D + VP
Sbjct: 85 APRLSDLSGLPSAVQMTSLKNIQRDIQNELA-IKKDYQTA--FSLMNDALFQDGLFLQVP 141
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXNDCYWA 258
C +E PI+L +LS + L +S R Y+
Sbjct: 142 KDCYLEKPIHLIHLSKP-----TASLTMSQIRHVILLEENAKAVIFEEYQGTN-GVAYFN 195
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
N V ++ + + LQ + A HI T++ Q S ++ G +LSR +++
Sbjct: 196 NVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRHSQVTSGHIAMGSELSRDDLNY 255
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 376
+L F+ L D H+R+ DH +C +Q +K ++A +AVF+G
Sbjct: 256 SLDEAGASCQLLGFYYLNDGCHVDNHTRI--DHRVSHCTSQQNYKGVLADK-SRAVFNGK 312
Query: 377 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 436
+ V A+QT A Q ++L+L A V+ KP L+I DDVKC+HGA + L E +FY Q
Sbjct: 313 IIVQPNAKQTSAHQTNKNLILSSDAEVDTKPELEIYNDDVKCTHGATVGQLNEEAIFYLQ 372
Query: 437 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGT 480
+RGI+ A L +F EV+E P I +++ V + + T
Sbjct: 373 SRGINRGAAEHLLTCAFANEVVEMLPNKVIADRIQQLVTDRLAT 416
>UNIPROTKB|P77689 [details] [associations]
symbol:sufD "SufD component of SufBCD Fe-S cluster scaffold
complex" species:83333 "Escherichia coli K-12" [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA;IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000825
InterPro:IPR011542 Pfam:PF01458 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016226
eggNOG:COG0719 KO:K09015 TIGRFAMs:TIGR01981 PDB:2ZU0 PDBsum:2ZU0
PIR:A64926 RefSeq:NP_416196.1 RefSeq:YP_489943.1 PDB:1VH4
PDBsum:1VH4 ProteinModelPortal:P77689 SMR:P77689 DIP:DIP-10940N
IntAct:P77689 PRIDE:P77689 EnsemblBacteria:EBESCT00000000837
EnsemblBacteria:EBESCT00000014727 GeneID:12931286 GeneID:944878
KEGG:ecj:Y75_p1656 KEGG:eco:b1681 PATRIC:32118668 EchoBASE:EB3721
EcoGene:EG13963 HOGENOM:HOG000069113 OMA:AQKTNAY
ProtClustDB:PRK10948 BioCyc:EcoCyc:G6907-MONOMER
BioCyc:ECOL316407:JW1671-MONOMER EvolutionaryTrace:P77689
Genevestigator:P77689 Uniprot:P77689
Length = 423
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 109/403 (27%), Positives = 197/403 (48%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFPSLVLIDGFI 138
Q LL T P+RK E +++T + +SQ I P ++ LV +DG
Sbjct: 34 QQLLRTGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRY 93
Query: 139 QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
+ LS+ +G G + ++D + + D I ++F + A + I V
Sbjct: 94 VPA---LSDATEGS--GYEVSINDD-RQGLPDAIQ----AEVFLHLTESLAQSVTHIAVK 143
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXNDC-YW 257
G + P+ L +++ +G V +++ ++ R ND ++
Sbjct: 144 RGQRPAKPLLLMHIT-QG--VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHF 198
Query: 258 ANSVLEVVIGKGGKVRHSYL--QNQ-SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+ + + ++H L +N S + AH TA + + GG + RH
Sbjct: 199 TGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGAVLRH 255
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AV
Sbjct: 256 NTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAV 312
Query: 373 FDGNVKVNRYAQQTDAGQLTRS-LLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 431
F+G + V ++A +TD GQ+T + LL+ A V+ KP L+I ADDVKCSHGA + +++ Q
Sbjct: 313 FNGLINVAQHAIKTD-GQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQ 371
Query: 432 LFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHV 474
+FY ++RGI+ + A++ ++++F AE+ E ++ QV++ +
Sbjct: 372 IFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARI 414
>TIGR_CMR|SPO_2017 [details] [associations]
symbol:SPO_2017 "FeS assembly protein SufD" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR000825 Pfam:PF01458 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016226 HOGENOM:HOG000069115
KO:K09015 RefSeq:YP_167249.1 ProteinModelPortal:Q5LRV6
GeneID:3193302 KEGG:sil:SPO2017 PATRIC:23377365 OMA:FNKCMEI
ProtClustDB:CLSK933716 Uniprot:Q5LRV6
Length = 426
Score = 232 (86.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 61/219 (27%), Positives = 106/219 (48%)
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
N +E+ I GG + H Q + + R AS Y+ ++ G L+R+ V
Sbjct: 204 NKCMEIDIADGGTLHHVRAQGRDHERRAVTHMFTRLGAASVYKSFTLTVNGVLTRNEQVV 263
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 376
+ G + ++ + D D + + H C RQ+ K ++ + VF G
Sbjct: 264 ELTGDEGVAHVAGACVGDGDFLHD--DTVFVTHDAVNCESRQVFKKVLRNG-ATGVFQGK 320
Query: 377 VKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQ 436
+ V AQ+TD Q+++SLLL+ + KP L+I ADDV CSHG+ ++++ LFY +
Sbjct: 321 ILVQPGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVACSHGSTSGAIDDTALFYLR 380
Query: 437 ARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 475
+RG+ + A L +F AE +E ++ +VS ++
Sbjct: 381 SRGVPEKAATDLLTLAFLAEAVEEIEDEALVADIVSRLE 419
Score = 43 (20.2 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA-QFPSLVLID 135
R+++ L P R+DE +++T + S + + + DA +V +D
Sbjct: 30 REAALARLREMGVPGRRDEYWKYTRPDSLISPEAPRAATFHTDEPMMFDAIDRLKIVFVD 89
Query: 136 GFIQNSALNLSNLPDGVYV 154
G A + L DGV +
Sbjct: 90 GVFDAEASDALEL-DGVRI 107
>GENEDB_PFALCIPARUM|PF11_0044 [details] [associations]
symbol:PF11_0044 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000825 Pfam:PF01458 GO:GO:0016226 EMBL:AE014186
RefSeq:XP_001347720.1 ProteinModelPortal:Q8IIW9
EnsemblProtists:PF11_0044:mRNA GeneID:810597 KEGG:pfa:PF11_0044
EuPathDB:PlasmoDB:PF3D7_1103400 HOGENOM:HOG000282191
ProtClustDB:CLSZ2433004 Uniprot:Q8IIW9
Length = 1462
Score = 233 (87.1 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 66/252 (26%), Positives = 111/252 (44%)
Query: 225 PISNPRXXXXXXXXXXXXXXXXXXXXXXNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
PI+NPR ++ N + + + V+H+ Q N
Sbjct: 1202 PITNPRLVVYVKGNSKINIYESHISLNKSNSGLVNGFSRICLEEKSNVKHTLSQELGNNV 1261
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ-QLGPDTETELSSFHLLVSDQTQDL 343
H +V+ + Y+ V+V G SR N+ ++ + G + E LL Q
Sbjct: 1262 WHFHNVSVKNGLNANYKFVDVLLGSLSSRINLQIEGEKG--CKQESYGLSLLEDKQNISQ 1319
Query: 344 HSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 403
+ +HP QL KC+V+ AV+ ++ R A + L +S+LL A+
Sbjct: 1320 YEMFHHEHPSMETNQLFKCLVSDK-AHAVWRSRGRIERNAIKAKLNTLCKSILLNFGASA 1378
Query: 404 NVKPNLQIIADDVKCS-HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 462
P L+II D++C+ HGA ISDLE+ +F RGI AR+ ++ SF E+++
Sbjct: 1379 VCIPTLEIIPSDIECANHGATISDLEKEPIFSLMTRGISERNAREIMMNSFVKEILDHIS 1438
Query: 463 YPSIRNQVVSHV 474
+++N+V V
Sbjct: 1439 DENLKNRVYQKV 1450
>UNIPROTKB|Q8IIW9 [details] [associations]
symbol:PF11_0044 "Iron-sulfur assembly protein, sufD,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000825 Pfam:PF01458 GO:GO:0016226 EMBL:AE014186
RefSeq:XP_001347720.1 ProteinModelPortal:Q8IIW9
EnsemblProtists:PF11_0044:mRNA GeneID:810597 KEGG:pfa:PF11_0044
EuPathDB:PlasmoDB:PF3D7_1103400 HOGENOM:HOG000282191
ProtClustDB:CLSZ2433004 Uniprot:Q8IIW9
Length = 1462
Score = 233 (87.1 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 66/252 (26%), Positives = 111/252 (44%)
Query: 225 PISNPRXXXXXXXXXXXXXXXXXXXXXXNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
PI+NPR ++ N + + + V+H+ Q N
Sbjct: 1202 PITNPRLVVYVKGNSKINIYESHISLNKSNSGLVNGFSRICLEEKSNVKHTLSQELGNNV 1261
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ-QLGPDTETELSSFHLLVSDQTQDL 343
H +V+ + Y+ V+V G SR N+ ++ + G + E LL Q
Sbjct: 1262 WHFHNVSVKNGLNANYKFVDVLLGSLSSRINLQIEGEKG--CKQESYGLSLLEDKQNISQ 1319
Query: 344 HSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATV 403
+ +HP QL KC+V+ AV+ ++ R A + L +S+LL A+
Sbjct: 1320 YEMFHHEHPSMETNQLFKCLVSDK-AHAVWRSRGRIERNAIKAKLNTLCKSILLNFGASA 1378
Query: 404 NVKPNLQIIADDVKCS-HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFP 462
P L+II D++C+ HGA ISDLE+ +F RGI AR+ ++ SF E+++
Sbjct: 1379 VCIPTLEIIPSDIECANHGATISDLEKEPIFSLMTRGISERNAREIMMNSFVKEILDHIS 1438
Query: 463 YPSIRNQVVSHV 474
+++N+V V
Sbjct: 1439 DENLKNRVYQKV 1450
>UNIPROTKB|O53153 [details] [associations]
symbol:MT1509 "UPF0051 protein Rv1462/MT1509" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0040007 "growth" evidence=IMP] [GO:0052572
"response to host immune response" evidence=IEP] InterPro:IPR000825
InterPro:IPR011542 Pfam:PF01458 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842576
GO:GO:0052572 GO:GO:0016226 eggNOG:COG0719 KO:K09015
TIGRFAMs:TIGR01981 HOGENOM:HOG000244977 PIR:A70872
RefSeq:NP_215978.1 RefSeq:NP_335959.1 RefSeq:YP_006514845.1
ProteinModelPortal:O53153 PRIDE:O53153
EnsemblBacteria:EBMYCT00000003295 EnsemblBacteria:EBMYCT00000072745
GeneID:13320054 GeneID:886567 GeneID:924462 KEGG:mtc:MT1509
KEGG:mtu:Rv1462 KEGG:mtv:RVBD_1462 PATRIC:18125084
TubercuList:Rv1462 OMA:AHAVWIG ProtClustDB:CLSK871933
Uniprot:O53153
Length = 397
Score = 209 (78.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 65/235 (27%), Positives = 115/235 (48%)
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+A++V E V+ ++ ++ + + N H+ R + V V GG + R +
Sbjct: 158 YADNV-EFVVDDAARLTAVWIADWADNTVHLSAHHARIGKDAVLRHVTVMLGGDVVRMSA 216
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ--LHKCIV----AHSLGQ 370
V+ G + EL + +D Q L SRLL+DH C+ L+K + A SL
Sbjct: 217 GVRFCGAGGDAELLGLYF--ADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPD 274
Query: 371 A--VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADD-VKCSHGAAISDL 427
A V+ G+V + A TD ++ R+L+L A + PNL+I + V H +A
Sbjct: 275 AHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRF 334
Query: 428 EESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVKNLMGTTD 482
++ QLFY ++RGI AR+ +V F E+I + P +R ++ + +++ + T+
Sbjct: 335 DDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELEITE 389
>UNIPROTKB|P67125 [details] [associations]
symbol:MT1508 "UPF0051 protein Rv1461/MT1508" species:1773
"Mycobacterium tuberculosis" [GO:0004519 "endonuclease activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] InterPro:IPR000825 InterPro:IPR004042
InterPro:IPR006141 InterPro:IPR006142 InterPro:IPR007868
InterPro:IPR010231 Pfam:PF01458 Pfam:PF05203 PRINTS:PR00379
PROSITE:PS50817 PROSITE:PS50818 PROSITE:PS50819 GO:GO:0005829
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0016226
TIGRFAMs:TIGR01980 GO:GO:0004519 GO:GO:0006314 InterPro:IPR003586
InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
TIGRFAMs:TIGR01443 eggNOG:COG1372 KO:K09014 PIR:H70871
RefSeq:NP_215977.1 RefSeq:NP_335958.1 RefSeq:YP_006514844.1
ProteinModelPortal:P67125 REBASE:4231 PRIDE:P67125
EnsemblBacteria:EBMYCT00000000183 EnsemblBacteria:EBMYCT00000072074
GeneID:13320053 GeneID:886609 GeneID:924461 KEGG:mtc:MT1508
KEGG:mtu:Rv1461 KEGG:mtv:RVBD_1461 PATRIC:18125082
TubercuList:Rv1461 HOGENOM:HOG000220422 ProtClustDB:CLSK791176
Uniprot:P67125
Length = 846
Score = 191 (72.3 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 53/204 (25%), Positives = 98/204 (48%)
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
++V+E+++ +VR++ +QN S N ++ R E + E ++ + G K++ V
Sbjct: 624 SAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAV 683
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 378
G + E+ S DQ QD +++L P + K VA G+ + G V+
Sbjct: 684 WMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKS-VARGGGRTSYRGLVQ 742
Query: 379 VNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQAR 438
VN+ A + + +LL++ + + P + I DDV H A +S + E+QLFY +R
Sbjct: 743 VNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSR 802
Query: 439 GIDLETARKALVFSFGAEVIERFP 462
G+ + A +V F + + P
Sbjct: 803 GLTEDEAMAMVVRGFVEPIAKELP 826
Score = 38 (18.4 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNV 219
IYVP G V+ P+ Y + N+
Sbjct: 208 IYVPPGVHVDIPLQA-YFRINTENM 231
>UNIPROTKB|Q81XL8 [details] [associations]
symbol:sufD "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016226
KO:K09015 TIGRFAMs:TIGR01981 HOGENOM:HOG000069114 OMA:QMYYLMS
RefSeq:NP_847398.1 RefSeq:YP_021871.1 RefSeq:YP_031093.1
ProteinModelPortal:Q81XL8 DNASU:1084642
EnsemblBacteria:EBBACT00000012978 EnsemblBacteria:EBBACT00000013859
EnsemblBacteria:EBBACT00000021658 GeneID:1084642 GeneID:2814805
GeneID:2848996 KEGG:ban:BA_5216 KEGG:bar:GBAA_5216 KEGG:bat:BAS4850
ProtClustDB:CLSK2485181 BioCyc:BANT260799:GJAJ-4928-MONOMER
BioCyc:BANT261594:GJ7F-5091-MONOMER Uniprot:Q81XL8
Length = 430
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 67/296 (22%), Positives = 131/296 (44%)
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXX 243
ING GA +YVP +E P+ +L VD ++ + N
Sbjct: 149 ING-GA----FVYVPKNVVLETPLQAVFL------VDGEEANVYN--HVLFVADANSTAT 195
Query: 244 XXXXXXXXXNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA-HI-KWTAVRQETASGYE 301
N AN V EV++ +G +V+ + + + ++ + V ++ +
Sbjct: 196 YVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGRDGRIDWA 255
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL--DHPRGYCRQL 359
L ++ G +S NV +G + + + + +QTQ+ ++++ H G+ +
Sbjct: 256 LGLMNDGNTISE-NV-TNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILK- 312
Query: 360 HKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCS 419
H V ++F+G K+ A +++A Q +R L+L+ +A + P L I DDV
Sbjct: 313 HG--VQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPILLIDEDDVMAG 370
Query: 420 HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 475
H A++ ++ QL+Y +RGI A + ++ F A V+ P ++ Q+V ++
Sbjct: 371 HAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIE 426
>TIGR_CMR|BA_5216 [details] [associations]
symbol:BA_5216 "FeS assembly protein SufD" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016226
KO:K09015 TIGRFAMs:TIGR01981 HOGENOM:HOG000069114 OMA:QMYYLMS
RefSeq:NP_847398.1 RefSeq:YP_021871.1 RefSeq:YP_031093.1
ProteinModelPortal:Q81XL8 DNASU:1084642
EnsemblBacteria:EBBACT00000012978 EnsemblBacteria:EBBACT00000013859
EnsemblBacteria:EBBACT00000021658 GeneID:1084642 GeneID:2814805
GeneID:2848996 KEGG:ban:BA_5216 KEGG:bar:GBAA_5216 KEGG:bat:BAS4850
ProtClustDB:CLSK2485181 BioCyc:BANT260799:GJAJ-4928-MONOMER
BioCyc:BANT261594:GJ7F-5091-MONOMER Uniprot:Q81XL8
Length = 430
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 67/296 (22%), Positives = 131/296 (44%)
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXX 243
ING GA +YVP +E P+ +L VD ++ + N
Sbjct: 149 ING-GA----FVYVPKNVVLETPLQAVFL------VDGEEANVYN--HVLFVADANSTAT 195
Query: 244 XXXXXXXXXNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA-HI-KWTAVRQETASGYE 301
N AN V EV++ +G +V+ + + + ++ + V ++ +
Sbjct: 196 YVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVNRRGVVGRDGRIDWA 255
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL--DHPRGYCRQL 359
L ++ G +S NV +G + + + + +QTQ+ ++++ H G+ +
Sbjct: 256 LGLMNDGNTISE-NV-TNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILK- 312
Query: 360 HKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCS 419
H V ++F+G K+ A +++A Q +R L+L+ +A + P L I DDV
Sbjct: 313 HG--VQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPILLIDEDDVMAG 370
Query: 420 HGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQVVSHVK 475
H A++ ++ QL+Y +RGI A + ++ F A V+ P ++ Q+V ++
Sbjct: 371 HAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQLVEVIE 426
>TAIR|locus:2138947 [details] [associations]
symbol:ABCI8 "AT4G04770" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA;IGI] [GO:0042626
"ATPase activity, coupled to transmembrane movement of substances"
evidence=ISS;IDA] [GO:2000030 "regulation of response to red or far
red light" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006879 "cellular iron ion homeostasis"
evidence=IDA;TAS] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000302 "response to reactive oxygen species" evidence=RCA]
[GO:0010039 "response to iron ion" evidence=RCA] [GO:0055072 "iron
ion homeostasis" evidence=RCA] InterPro:IPR000825
InterPro:IPR010231 Pfam:PF01458 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0042626 GO:GO:0006879 GO:GO:0016226
eggNOG:COG0719 EMBL:AF118223 EMBL:AL161501 EMBL:AY052195
EMBL:AY056410 EMBL:AY142069 EMBL:BK001497 IPI:IPI00526234
PIR:A85060 RefSeq:NP_192386.1 UniGene:At.4040 UniGene:At.67960
ProteinModelPortal:Q9ZS97 IntAct:Q9ZS97 STRING:Q9ZS97 PaxDb:Q9ZS97
PRIDE:Q9ZS97 EnsemblPlants:AT4G04770.1 GeneID:825814
KEGG:ath:AT4G04770 GeneFarm:2674 TAIR:At4g04770
HOGENOM:HOG000069112 InParanoid:Q9ZS97 KO:K07033 OMA:YYSAPKQ
PhylomeDB:Q9ZS97 ProtClustDB:CLSN2685558 Genevestigator:Q9ZS97
GermOnline:AT4G04770 GO:GO:2000030 TIGRFAMs:TIGR01980
Uniprot:Q9ZS97
Length = 557
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 62/224 (27%), Positives = 99/224 (44%)
Query: 260 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY--------ELVEVSTGGKL 311
+V+E+ GKG ++++S +QN K T G +V TG +
Sbjct: 328 AVVELYCGKGAEIKYSTVQNWYAGDEQGKGGIYNFVTKRGLCAGDRSKISWTQVETGSAI 387
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQ 370
+ V G D+ E S L + Q D ++++ R + K I A HS +
Sbjct: 388 TWKYPSVVLEGDDSVGEFYSVALTNNYQQADTGTKMIHKGKNTKSRIISKGISAGHS--R 445
Query: 371 AVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 430
+ G V+V A+ S+L+ +A N P +Q+ K H A+ S + E
Sbjct: 446 NCYRGLVQVQSKAEGAKNTSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEASTSKIGED 505
Query: 431 QLFYFQARGIDLETARKALVFSFGAEVIERFP--YPSIRNQVVS 472
QLFYFQ RGID E A A++ F +V + P + + NQ++S
Sbjct: 506 QLFYFQQRGIDHERALAAMISGFCRDVFNKLPDEFGAEVNQLMS 549
>UNIPROTKB|Q81XM1 [details] [associations]
symbol:sufB "FeS assembly protein SufB" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000825 InterPro:IPR010231 Pfam:PF01458 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016226
HOGENOM:HOG000069112 OMA:YYSAPKQ TIGRFAMs:TIGR01980 KO:K09014
RefSeq:NP_847395.1 RefSeq:YP_021868.1 RefSeq:YP_031090.1
ProteinModelPortal:Q81XM1 IntAct:Q81XM1 DNASU:1084635
EnsemblBacteria:EBBACT00000009506 EnsemblBacteria:EBBACT00000016263
EnsemblBacteria:EBBACT00000022432 GeneID:1084635 GeneID:2814847
GeneID:2848938 KEGG:ban:BA_5213 KEGG:bar:GBAA_5213 KEGG:bat:BAS4847
ProtClustDB:CLSK2758179 BioCyc:BANT260799:GJAJ-4925-MONOMER
BioCyc:BANT261594:GJ7F-5088-MONOMER Uniprot:Q81XM1
Length = 465
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 61/260 (23%), Positives = 110/260 (42%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXND 254
IYVP G KV+ P+ Y + N+ + + N
Sbjct: 186 IYVPKGVKVDTPLQA-YFRINSENMGQFERTL----IIVDEGAHVHYVEGCTAPVYTTNS 240
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH-IKWTAVRQETASGYELVEVSTGGKLSR 313
+ ++V+E++I K R++ +QN + N + + AV +E A+ E ++ + G KL+
Sbjct: 241 LH--SAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENAT-MEWIDGNLGSKLTM 297
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 373
V G S + Q QD ++++ P + K I H G+ +
Sbjct: 298 KYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHG-GKVTY 356
Query: 374 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 433
G V A+ + + +L+++ ++T + P +I D V H A +S + E QLF
Sbjct: 357 RGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLF 416
Query: 434 YFQARGIDLETARKALVFSF 453
Y +RGI + A + +V F
Sbjct: 417 YLMSRGISEQEATEMIVMGF 436
>TIGR_CMR|BA_5213 [details] [associations]
symbol:BA_5213 "FeS assembly protein SufB" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR000825 InterPro:IPR010231 Pfam:PF01458
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016226
HOGENOM:HOG000069112 OMA:YYSAPKQ TIGRFAMs:TIGR01980 KO:K09014
RefSeq:NP_847395.1 RefSeq:YP_021868.1 RefSeq:YP_031090.1
ProteinModelPortal:Q81XM1 IntAct:Q81XM1 DNASU:1084635
EnsemblBacteria:EBBACT00000009506 EnsemblBacteria:EBBACT00000016263
EnsemblBacteria:EBBACT00000022432 GeneID:1084635 GeneID:2814847
GeneID:2848938 KEGG:ban:BA_5213 KEGG:bar:GBAA_5213 KEGG:bat:BAS4847
ProtClustDB:CLSK2758179 BioCyc:BANT260799:GJAJ-4925-MONOMER
BioCyc:BANT261594:GJ7F-5088-MONOMER Uniprot:Q81XM1
Length = 465
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 61/260 (23%), Positives = 110/260 (42%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXND 254
IYVP G KV+ P+ Y + N+ + + N
Sbjct: 186 IYVPKGVKVDTPLQA-YFRINSENMGQFERTL----IIVDEGAHVHYVEGCTAPVYTTNS 240
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH-IKWTAVRQETASGYELVEVSTGGKLSR 313
+ ++V+E++I K R++ +QN + N + + AV +E A+ E ++ + G KL+
Sbjct: 241 LH--SAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENAT-MEWIDGNLGSKLTM 297
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 373
V G S + Q QD ++++ P + K I H G+ +
Sbjct: 298 KYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHG-GKVTY 356
Query: 374 DGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLF 433
G V A+ + + +L+++ ++T + P +I D V H A +S + E QLF
Sbjct: 357 RGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLF 416
Query: 434 YFQARGIDLETARKALVFSF 453
Y +RGI + A + +V F
Sbjct: 417 YLMSRGISEQEATEMIVMGF 436
>UNIPROTKB|Q71X17 [details] [associations]
symbol:sufB "FeS assembly protein SufB" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000825
InterPro:IPR010231 Pfam:PF01458 GO:GO:0016226 eggNOG:COG0719
HOGENOM:HOG000069112 OMA:YYSAPKQ TIGRFAMs:TIGR01980 EMBL:AE017262
GenomeReviews:AE017262_GR KO:K09014 RefSeq:YP_014971.1
ProteinModelPortal:Q71X17 STRING:Q71X17 GeneID:2798709
KEGG:lmf:LMOf2365_2382 PATRIC:20326131 ProtClustDB:CLSK2753258
Uniprot:Q71X17
Length = 464
Score = 155 (59.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 64/306 (20%), Positives = 119/306 (38%)
Query: 154 VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV------IYVPAGCKVENPI 207
+G + +D +K D E+ + S N A + V IYVP G KV+ P+
Sbjct: 138 LGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPL 197
Query: 208 YLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXNDCYWANSVLEVVIG 267
Y + N+ + + N + ++V+E+++
Sbjct: 198 QA-YFRINSENMGQFERTL----IIVDENASVNYVEGCTAPVYTTNSLH--SAVVEIIVK 250
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
G R++ +QN + N ++ E + E ++ + G KL+ V G
Sbjct: 251 PGAYCRYTTIQNWANNVYNLVTKRTFCEENATMEWIDGNIGSKLTMKYPAVHLRGEGARG 310
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTD 387
S + Q QD ++++ P + K I G + G V R A
Sbjct: 311 TTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSKSISKQG-GNVTYRGIVHFGRNADGAR 369
Query: 388 AGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARK 447
+ +L+++ +T + P +I+ ++ H A +S + E QLFY +RG+ E A +
Sbjct: 370 SNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATE 429
Query: 448 ALVFSF 453
+V F
Sbjct: 430 MIVMGF 435
>UNIPROTKB|Q71X14 [details] [associations]
symbol:sufD "FeS assembly protein SufD" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000825
InterPro:IPR011542 Pfam:PF01458 GO:GO:0016226 eggNOG:COG0719
KO:K09015 TIGRFAMs:TIGR01981 EMBL:AE017262
GenomeReviews:AE017262_GR RefSeq:YP_014974.1
ProteinModelPortal:Q71X14 STRING:Q71X14 DNASU:2798744
GeneID:2798744 KEGG:lmf:LMOf2365_2385 PATRIC:20326137
HOGENOM:HOG000069114 OMA:QMYYLMS ProtClustDB:CLSK2461577
Uniprot:Q71X14
Length = 429
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 42/161 (26%), Positives = 80/161 (49%)
Query: 315 NVHVQQL-GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL----G 369
N +V L G + ++ + + QTQ++ +R+ H Y + + I++H +
Sbjct: 265 NENVTNLMGDGSSADVKTVTVGRGKQTQNVTTRVT--H---YGKASNGTILSHGVMKERA 319
Query: 370 QAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEE 429
+F+G + A ++DA Q +R L+L P A + P L I +DV H A++ ++
Sbjct: 320 TTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDP 379
Query: 430 SQLFYFQARGIDLETARKALVFSFGAEVIERFPYPSIRNQV 470
QLFY +RGI + A + ++ F V+ + P S++ +
Sbjct: 380 LQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIESVKTML 420
>TIGR_CMR|SPO_2023 [details] [associations]
symbol:SPO_2023 "FeS assembly protein SufB" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR000825 InterPro:IPR010231 Pfam:PF01458
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016226
HOGENOM:HOG000069112 TIGRFAMs:TIGR01980 KO:K09014
ProtClustDB:PRK11814 RefSeq:YP_167255.1 ProteinModelPortal:Q5LRV0
GeneID:3193051 KEGG:sil:SPO2023 PATRIC:23377377 OMA:DTIRYIS
Uniprot:Q5LRV0
Length = 506
Score = 129 (50.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 48/211 (22%), Positives = 95/211 (45%)
Query: 260 SVLEVVIGKGGKVRHSYLQN-----QSLNAAHIKWTAVRQETASGYELV---EVSTGGKL 311
+V+E++I + +V++S +QN ++ + R + V +V TG +
Sbjct: 277 AVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRSKVMWTQVETGSAV 336
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 371
+ G D++ E S + + Q D ++++ R + K I A Q
Sbjct: 337 TWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMIHLGKNTKSRIVSKGISA-GRAQN 395
Query: 372 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 431
+ G V ++ A+ + SLL+ + + P +++ + +C H A S ++E Q
Sbjct: 396 TYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDEDQ 455
Query: 432 LFYFQARGIDLETARKALVFSFGAEVIERFP 462
LFY ++RG+D E A +V F +V++ P
Sbjct: 456 LFYCRSRGMDEEEAVALVVNGFCKDVLQALP 486
>TAIR|locus:504954963 [details] [associations]
symbol:ABCI9 "ATP-binding cassette I9" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
InterPro:IPR000825 Pfam:PF01458 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016226 eggNOG:COG0719
HOGENOM:HOG000069112 EMBL:AB011475 IPI:IPI00520056
RefSeq:NP_680390.1 UniGene:At.55351 ProteinModelPortal:Q3E8H7
STRING:Q3E8H7 PaxDb:Q3E8H7 PRIDE:Q3E8H7 EnsemblPlants:AT5G44316.1
GeneID:834456 KEGG:ath:AT5G44316 GeneFarm:2679 TAIR:At5g44316
InParanoid:Q3E8H7 OMA:CTAISHD PhylomeDB:Q3E8H7
ProtClustDB:CLSN2917853 Genevestigator:Q3E8H7 Uniprot:Q3E8H7
Length = 470
Score = 125 (49.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 372 VFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQ 431
V +G+ V A+ S+L+ A N P +Q+ + H A+ S + E Q
Sbjct: 361 VLEGDDSVGE-AENARNTSTCDSMLIGDNAAANTYPYIQVKNPSARIEHEASTSKIGEDQ 419
Query: 432 LFYFQARGIDLETARKALVFSFGAEVIERFP--YPSIRNQVVS 472
+FYFQ RGID E A A++ F +V + P + + NQ++S
Sbjct: 420 IFYFQQRGIDHERALAAMISGFCRDVFNKLPNEFGAEVNQLLS 462
Score = 39 (18.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/50 (22%), Positives = 25/50 (50%)
Query: 260 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
+V+E+ +G ++++S + + + I WT V + A ++ V G
Sbjct: 315 AVVELYCAEGAEIKYSTRGLCAGDRSKISWTQVEKGFAITWKYPSVVLEG 364
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 486 448 0.00091 118 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 611 (65 KB)
Total size of DFA: 255 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.52u 0.08s 33.60t Elapsed: 00:00:13
Total cpu time: 33.52u 0.09s 33.61t Elapsed: 00:00:13
Start: Fri May 10 11:01:11 2013 End: Fri May 10 11:01:24 2013