Query 011435
Match_columns 486
No_of_seqs 308 out of 1748
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 08:05:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011435.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011435hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.9 2.5E-22 8.7E-27 215.0 15.0 150 75-226 310-480 (496)
2 4hw6_A Hypothetical protein, I 99.8 9.1E-20 3.1E-24 191.5 18.4 143 76-220 274-432 (433)
3 3hrp_A Uncharacterized protein 99.8 9.4E-19 3.2E-23 181.8 19.6 139 75-220 266-409 (409)
4 3tc9_A Hypothetical hydrolase; 99.8 2.9E-19 9.8E-24 187.3 15.8 144 75-220 270-429 (430)
5 3kya_A Putative phosphatase; s 99.7 7.9E-17 2.7E-21 172.6 17.4 140 75-229 247-418 (496)
6 4hw6_A Hypothetical protein, I 99.7 1.7E-16 5.9E-21 166.6 17.9 173 74-266 227-423 (433)
7 3tc9_A Hypothetical hydrolase; 99.7 2.4E-16 8.2E-21 165.1 16.3 172 74-266 225-420 (430)
8 3fvz_A Peptidyl-glycine alpha- 99.7 1.1E-14 3.6E-19 144.9 25.4 153 53-222 69-229 (329)
9 3hrp_A Uncharacterized protein 99.7 2.6E-15 8.8E-20 155.8 21.8 175 74-266 218-400 (409)
10 3fvz_A Peptidyl-glycine alpha- 99.6 1.6E-13 5.6E-18 136.3 20.9 125 74-223 23-177 (329)
11 3v64_C Agrin; beta propeller, 99.5 4.6E-13 1.6E-17 136.1 21.6 116 75-222 116-235 (349)
12 1q7f_A NHL, brain tumor CG1071 99.5 5.1E-13 1.7E-17 128.3 20.3 116 75-222 121-239 (286)
13 3p5b_L Low density lipoprotein 99.5 8.9E-13 3E-17 136.6 21.9 115 75-222 159-278 (400)
14 3v65_B Low-density lipoprotein 99.5 9.4E-13 3.2E-17 135.5 21.0 115 75-222 159-278 (386)
15 1ijq_A LDL receptor, low-densi 99.5 9.2E-13 3.2E-17 131.6 19.7 115 75-222 77-196 (316)
16 3m0c_C LDL receptor, low-densi 99.5 9.3E-13 3.2E-17 148.4 21.9 116 74-222 470-590 (791)
17 3v64_C Agrin; beta propeller, 99.5 9.6E-13 3.3E-17 133.7 18.8 114 74-222 158-277 (349)
18 3sov_A LRP-6, low-density lipo 99.5 1.6E-12 5.3E-17 131.0 19.3 115 75-222 79-198 (318)
19 4a0p_A LRP6, LRP-6, low-densit 99.5 2E-12 6.8E-17 142.1 21.8 114 75-222 80-198 (628)
20 1npe_A Nidogen, entactin; glyc 99.5 4.3E-12 1.5E-16 121.9 20.8 115 75-222 79-199 (267)
21 3s94_A LRP-6, low-density lipo 99.4 3.4E-12 1.2E-16 140.0 20.9 115 75-222 392-511 (619)
22 3sov_A LRP-6, low-density lipo 99.4 4.1E-12 1.4E-16 127.9 19.7 114 74-222 121-240 (318)
23 1q7f_A NHL, brain tumor CG1071 99.4 1E-11 3.4E-16 119.2 20.9 115 75-222 77-195 (286)
24 3p5b_L Low density lipoprotein 99.4 5.4E-12 1.9E-16 130.7 19.4 116 74-222 201-322 (400)
25 3v65_B Low-density lipoprotein 99.4 6.4E-12 2.2E-16 129.3 19.7 147 74-266 115-267 (386)
26 1ijq_A LDL receptor, low-densi 99.4 2E-11 6.8E-16 121.9 21.6 149 74-265 29-184 (316)
27 1rwi_B Serine/threonine-protei 99.4 1.7E-11 6E-16 115.7 19.7 114 75-222 67-181 (270)
28 3s94_A LRP-6, low-density lipo 99.4 6.9E-12 2.4E-16 137.5 19.3 115 75-222 84-203 (619)
29 1npe_A Nidogen, entactin; glyc 99.4 1.5E-11 5.1E-16 118.1 19.2 113 76-222 37-156 (267)
30 1rwi_B Serine/threonine-protei 99.4 9.4E-12 3.2E-16 117.6 16.6 146 75-266 108-254 (270)
31 3m0c_C LDL receptor, low-densi 99.4 1.7E-11 5.8E-16 138.1 19.9 119 74-222 423-547 (791)
32 2qc5_A Streptogramin B lactona 99.3 9.1E-11 3.1E-15 111.5 21.5 118 74-224 145-263 (300)
33 4a0p_A LRP6, LRP-6, low-densit 99.3 3.3E-11 1.1E-15 132.4 20.6 145 74-266 388-539 (628)
34 2qc5_A Streptogramin B lactona 99.3 1.8E-10 6.1E-15 109.5 22.5 116 75-223 104-220 (300)
35 2fp8_A Strictosidine synthase; 99.3 3.2E-11 1.1E-15 119.2 17.6 116 75-222 80-217 (322)
36 2z2n_A Virginiamycin B lyase; 99.3 6.9E-10 2.4E-14 105.4 22.7 116 74-222 98-214 (299)
37 1n7d_A LDL receptor, low-densi 99.3 1.2E-11 4.2E-16 137.2 11.9 115 75-222 453-572 (699)
38 2z2n_A Virginiamycin B lyase; 99.2 1.1E-09 3.6E-14 104.1 22.0 115 75-222 57-172 (299)
39 2fp8_A Strictosidine synthase; 99.2 1.3E-10 4.6E-15 114.6 15.7 117 75-222 185-314 (322)
40 3e5z_A Putative gluconolactona 99.2 3.9E-10 1.3E-14 109.0 17.9 128 60-222 16-163 (296)
41 1n7d_A LDL receptor, low-densi 99.2 8E-11 2.7E-15 130.7 14.0 114 74-220 495-613 (699)
42 2p4o_A Hypothetical protein; p 99.2 3E-10 1E-14 111.8 15.6 112 75-221 32-147 (306)
43 3dr2_A Exported gluconolactona 99.2 6.7E-10 2.3E-14 108.8 17.9 126 60-220 33-177 (305)
44 3e5z_A Putative gluconolactona 99.2 2.6E-09 9E-14 103.1 20.9 115 75-220 69-201 (296)
45 3dr2_A Exported gluconolactona 99.1 1.7E-09 5.9E-14 105.8 19.2 115 75-222 86-225 (305)
46 3g4e_A Regucalcin; six bladed 99.1 1.3E-09 4.6E-14 106.4 18.1 115 74-222 97-231 (297)
47 2ism_A Putative oxidoreductase 99.1 5.2E-10 1.8E-14 113.7 15.2 122 75-213 75-225 (352)
48 2p4o_A Hypothetical protein; p 99.1 3.1E-09 1.1E-13 104.5 16.3 106 74-211 168-279 (306)
49 3a9g_A Putative uncharacterize 99.0 8.3E-09 2.8E-13 105.2 18.4 171 59-266 16-218 (354)
50 3dsm_A Uncharacterized protein 99.0 4.2E-09 1.4E-13 104.8 15.4 131 56-222 157-303 (328)
51 3dsm_A Uncharacterized protein 99.0 2.4E-08 8.2E-13 99.3 19.8 132 54-221 67-212 (328)
52 2ism_A Putative oxidoreductase 99.0 8.5E-09 2.9E-13 104.7 16.5 172 63-266 22-223 (352)
53 2qe8_A Uncharacterized protein 99.0 1.3E-08 4.5E-13 101.7 17.4 169 75-265 120-310 (343)
54 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 1.5E-08 5.1E-13 97.4 15.4 121 75-222 18-163 (314)
55 2dg1_A DRP35, lactonase; beta 98.9 7.2E-08 2.4E-12 94.0 19.7 127 60-221 33-171 (333)
56 3g4e_A Regucalcin; six bladed 98.9 7.8E-08 2.7E-12 93.8 19.5 113 76-222 14-140 (297)
57 3a9g_A Putative uncharacterize 98.9 1.1E-08 3.9E-13 104.2 13.8 126 75-218 73-228 (354)
58 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 2.8E-08 9.5E-13 95.5 15.5 118 75-221 172-299 (314)
59 2dg1_A DRP35, lactonase; beta 98.9 3.2E-08 1.1E-12 96.5 15.9 119 75-222 135-264 (333)
60 2p9w_A MAL S 1 allergenic prot 98.9 1.5E-08 5.1E-13 103.4 13.8 132 75-221 63-215 (334)
61 2qe8_A Uncharacterized protein 98.9 4.3E-09 1.5E-13 105.2 9.0 120 76-218 196-318 (343)
62 3sre_A PON1, serum paraoxonase 98.8 9.1E-08 3.1E-12 98.4 17.9 146 75-263 112-284 (355)
63 2ghs_A AGR_C_1268P; regucalcin 98.8 2E-07 6.9E-12 92.5 18.5 113 75-222 134-261 (326)
64 3sre_A PON1, serum paraoxonase 98.8 9.4E-08 3.2E-12 98.3 15.2 110 72-220 162-297 (355)
65 2g8s_A Glucose/sorbosone dehyd 98.7 9.5E-08 3.3E-12 97.1 13.3 139 58-222 4-174 (353)
66 3das_A Putative oxidoreductase 98.7 5E-07 1.7E-11 92.6 18.4 171 62-266 22-222 (347)
67 3no2_A Uncharacterized protein 98.7 9.5E-07 3.2E-11 86.4 19.4 115 77-222 79-197 (276)
68 1cru_A Protein (soluble quinop 98.7 2.5E-07 8.4E-12 97.8 15.8 179 58-266 13-248 (454)
69 3no2_A Uncharacterized protein 98.6 4.1E-07 1.4E-11 89.0 15.3 117 75-222 125-254 (276)
70 2p9w_A MAL S 1 allergenic prot 98.6 2.8E-07 9.5E-12 94.0 14.1 134 75-222 13-169 (334)
71 3vgz_A Uncharacterized protein 98.6 5.9E-06 2E-10 79.9 21.4 137 56-222 74-216 (353)
72 2ghs_A AGR_C_1268P; regucalcin 98.6 1.3E-06 4.3E-11 86.7 16.2 107 76-211 180-293 (326)
73 3vgz_A Uncharacterized protein 98.5 1.5E-05 5.3E-10 77.0 21.6 113 75-221 185-303 (353)
74 2iwa_A Glutamine cyclotransfer 98.5 4.9E-06 1.7E-10 82.3 17.9 131 54-221 47-181 (266)
75 3hfq_A Uncharacterized protein 98.5 1.1E-05 3.7E-10 78.9 20.2 124 75-220 187-316 (347)
76 3hfq_A Uncharacterized protein 98.5 2.4E-06 8.2E-11 83.6 14.7 125 75-220 40-170 (347)
77 3das_A Putative oxidoreductase 98.4 3.9E-06 1.3E-10 86.0 16.5 125 75-218 80-232 (347)
78 2g8s_A Glucose/sorbosone dehyd 98.4 2.8E-06 9.6E-11 86.2 15.1 139 75-221 130-308 (353)
79 2iwa_A Glutamine cyclotransfer 98.4 3.3E-06 1.1E-10 83.5 14.4 145 54-221 89-237 (266)
80 3u4y_A Uncharacterized protein 98.3 1.6E-05 5.6E-10 76.6 16.3 127 55-221 24-160 (331)
81 3scy_A Hypothetical bacterial 98.3 2E-05 6.7E-10 77.7 17.1 118 75-220 211-336 (361)
82 1cru_A Protein (soluble quinop 98.3 6.2E-06 2.1E-10 87.0 13.4 118 76-212 78-249 (454)
83 3u4y_A Uncharacterized protein 98.2 4.3E-05 1.5E-09 73.6 17.9 125 75-222 176-305 (331)
84 3scy_A Hypothetical bacterial 98.2 2.2E-05 7.6E-10 77.3 15.8 121 77-220 157-290 (361)
85 1ri6_A Putative isomerase YBHE 98.2 0.00018 6.1E-09 68.8 20.9 121 75-220 178-307 (343)
86 4a9v_A PHOX; hydrolase, beta-p 98.2 9.9E-06 3.4E-10 87.9 13.2 121 74-208 383-549 (592)
87 3qqz_A Putative uncharacterize 98.2 0.0001 3.4E-09 72.3 19.1 151 61-221 58-253 (255)
88 3mbr_X Glutamine cyclotransfer 98.1 8.5E-05 2.9E-09 72.5 17.6 132 53-221 45-179 (243)
89 3nol_A Glutamine cyclotransfer 98.1 5.6E-05 1.9E-09 74.6 15.9 131 54-221 68-201 (262)
90 3nok_A Glutaminyl cyclase; bet 98.1 3.6E-05 1.2E-09 76.2 13.8 128 56-221 80-210 (268)
91 3c75_H MADH, methylamine dehyd 98.1 2.3E-05 7.9E-10 82.3 13.2 96 54-165 102-209 (426)
92 1l0q_A Surface layer protein; 98.1 0.00038 1.3E-08 68.6 21.2 126 56-222 59-190 (391)
93 3nol_A Glutamine cyclotransfer 98.1 6.6E-05 2.3E-09 74.1 15.3 141 56-220 112-255 (262)
94 2mad_H Methylamine dehydrogena 98.1 8.5E-05 2.9E-09 75.9 16.4 130 54-220 50-195 (373)
95 1jof_A Carboxy-CIS,CIS-muconat 98.0 0.00029 9.9E-09 70.1 19.6 129 75-220 145-290 (365)
96 1l0q_A Surface layer protein; 98.0 0.00044 1.5E-08 68.1 20.4 126 56-222 17-148 (391)
97 3mbr_X Glutamine cyclotransfer 98.0 0.00017 5.9E-09 70.3 17.0 144 54-221 88-235 (243)
98 1pby_B Quinohemoprotein amine 98.0 0.00026 8.9E-09 67.5 17.0 132 56-222 16-164 (337)
99 1ri6_A Putative isomerase YBHE 97.9 0.00076 2.6E-08 64.4 19.7 122 75-220 129-261 (343)
100 1nir_A Nitrite reductase; hemo 97.9 0.00046 1.6E-08 73.8 19.9 137 56-221 164-311 (543)
101 1mda_H Methylamine dehydrogena 97.9 4.4E-05 1.5E-09 78.5 11.2 132 54-221 49-194 (368)
102 1qks_A Cytochrome CD1 nitrite 97.9 0.00051 1.7E-08 74.4 19.2 87 55-165 181-275 (567)
103 3nok_A Glutaminyl cyclase; bet 97.8 0.00025 8.4E-09 70.2 14.8 118 62-221 44-164 (268)
104 1jof_A Carboxy-CIS,CIS-muconat 97.8 0.00049 1.7E-08 68.5 17.1 132 75-222 193-342 (365)
105 3c75_H MADH, methylamine dehyd 97.8 0.00015 5E-09 76.2 12.5 109 84-222 82-210 (426)
106 3qqz_A Putative uncharacterize 97.7 0.00014 4.9E-09 71.2 11.1 79 75-164 173-252 (255)
107 3bws_A Protein LP49; two-domai 97.7 0.00099 3.4E-08 66.5 17.5 109 76-221 304-432 (433)
108 3sjl_D Methylamine dehydrogena 97.7 0.00042 1.4E-08 71.9 14.9 132 54-214 62-212 (386)
109 1jmx_B Amine dehydrogenase; ox 97.7 0.00084 2.9E-08 64.4 16.1 130 56-221 26-175 (349)
110 3sjl_D Methylamine dehydrogena 97.7 0.00017 5.9E-09 74.8 11.6 111 83-222 41-170 (386)
111 2oiz_A Aromatic amine dehydrog 97.7 0.0018 6.2E-08 65.0 18.3 50 56-105 86-140 (361)
112 1jmx_B Amine dehydrogenase; ox 97.6 0.00035 1.2E-08 67.0 11.7 117 77-221 2-134 (349)
113 3bws_A Protein LP49; two-domai 97.6 0.0039 1.3E-07 62.1 19.7 109 76-221 255-390 (433)
114 2oiz_A Aromatic amine dehydrog 97.6 0.00045 1.5E-08 69.5 12.6 93 55-165 35-140 (361)
115 1fwx_A Nitrous oxide reductase 97.5 0.00095 3.3E-08 72.8 14.5 153 54-221 178-361 (595)
116 1nir_A Nitrite reductase; hemo 97.5 0.002 6.8E-08 68.9 16.8 123 75-222 222-356 (543)
117 1mda_H Methylamine dehydrogena 97.5 0.00066 2.3E-08 69.7 12.1 107 86-221 32-158 (368)
118 2wg3_C Hedgehog-interacting pr 97.4 0.0019 6.6E-08 68.3 14.4 141 60-222 2-187 (463)
119 2ece_A 462AA long hypothetical 97.4 0.0023 8E-08 67.7 14.7 159 54-220 231-424 (462)
120 2mad_H Methylamine dehydrogena 97.3 0.0023 7.8E-08 65.2 14.0 108 84-221 30-156 (373)
121 1fwx_A Nitrous oxide reductase 97.3 0.00012 4E-09 80.0 4.0 140 53-222 256-432 (595)
122 3amr_A 3-phytase; beta-propell 97.2 0.0074 2.5E-07 61.9 15.8 117 75-221 128-263 (355)
123 2ece_A 462AA long hypothetical 97.1 0.0091 3.1E-07 63.3 15.9 148 56-220 169-351 (462)
124 1tl2_A L10, protein (tachylect 97.1 0.0056 1.9E-07 59.3 12.9 108 76-218 42-160 (236)
125 1qks_A Cytochrome CD1 nitrite 97.1 0.0033 1.1E-07 68.0 12.6 103 82-221 163-275 (567)
126 1pby_B Quinohemoprotein amine 97.0 0.016 5.4E-07 54.9 15.4 75 136-222 35-125 (337)
127 3zwu_A Alkaline phosphatase PH 97.0 0.0052 1.8E-07 67.1 12.9 122 72-207 381-548 (592)
128 3amr_A 3-phytase; beta-propell 96.9 0.036 1.2E-06 56.8 17.7 128 56-220 55-209 (355)
129 3hxj_A Pyrrolo-quinoline quino 96.9 0.011 3.6E-07 56.6 13.1 68 136-222 216-285 (330)
130 3s25_A Hypothetical 7-bladed b 96.8 0.0062 2.1E-07 60.6 10.7 105 80-226 109-221 (302)
131 4a9v_A PHOX; hydrolase, beta-p 96.7 0.016 5.4E-07 63.0 13.9 89 131-220 380-517 (592)
132 3s25_A Hypothetical 7-bladed b 96.6 0.03 1E-06 55.6 14.6 62 141-222 229-294 (302)
133 2wg3_C Hedgehog-interacting pr 96.6 0.046 1.6E-06 57.7 16.4 119 76-209 70-242 (463)
134 3q6k_A 43.2 kDa salivary prote 96.5 0.31 1.1E-05 50.3 21.3 147 56-221 128-306 (381)
135 3q6k_A 43.2 kDa salivary prote 96.3 0.035 1.2E-06 57.4 13.1 106 76-210 221-343 (381)
136 3hxj_A Pyrrolo-quinoline quino 96.2 0.039 1.3E-06 52.6 12.2 104 78-222 140-245 (330)
137 1tl2_A L10, protein (tachylect 96.0 0.071 2.4E-06 51.5 12.8 105 134-263 40-152 (236)
138 3zwu_A Alkaline phosphatase PH 95.9 0.13 4.4E-06 56.2 15.5 79 131-210 380-495 (592)
139 2ymu_A WD-40 repeat protein; u 95.8 0.51 1.7E-05 48.6 19.4 110 77-222 429-540 (577)
140 1gxr_A ESG1, transducin-like e 95.7 0.81 2.8E-05 42.8 18.8 111 76-222 185-297 (337)
141 3ow8_A WD repeat-containing pr 95.5 0.61 2.1E-05 45.2 17.6 129 56-222 107-238 (321)
142 3ow8_A WD repeat-containing pr 95.4 0.73 2.5E-05 44.6 17.6 113 77-224 167-282 (321)
143 1gxr_A ESG1, transducin-like e 95.4 0.53 1.8E-05 44.1 16.1 107 76-219 226-335 (337)
144 2ymu_A WD-40 repeat protein; u 95.2 0.33 1.1E-05 50.0 15.4 106 77-218 470-577 (577)
145 3v9f_A Two-component system se 95.1 0.8 2.7E-05 50.2 18.9 115 76-222 496-612 (781)
146 1got_B GT-beta; complex (GTP-b 95.0 2.3 7.9E-05 41.0 19.9 112 77-221 187-301 (340)
147 3v9f_A Two-component system se 94.9 0.27 9.3E-06 54.0 14.2 117 76-222 451-569 (781)
148 2ojh_A Uncharacterized protein 94.4 2 6.8E-05 38.9 16.8 72 76-165 43-119 (297)
149 3zwl_B Eukaryotic translation 94.2 1.2 4.1E-05 42.1 15.4 109 77-221 35-151 (369)
150 4gqb_B Methylosome protein 50; 94.1 1.3 4.4E-05 43.7 16.0 113 78-222 131-247 (344)
151 3iz6_a 40S ribosomal protein R 94.0 1.7 5.9E-05 42.7 16.6 121 77-221 252-375 (380)
152 4ery_A WD repeat-containing pr 93.9 4.3 0.00015 38.1 20.7 111 77-222 110-224 (312)
153 2aq5_A Coronin-1A; WD40 repeat 93.8 2.6 9E-05 41.4 17.5 133 56-222 159-300 (402)
154 1erj_A Transcriptional repress 93.6 2 6.8E-05 42.5 16.3 109 78-221 127-238 (393)
155 2hqs_A Protein TOLB; TOLB, PAL 93.6 4.9 0.00017 40.4 19.5 110 77-222 181-301 (415)
156 4ery_A WD repeat-containing pr 93.6 4.9 0.00017 37.7 19.6 111 77-222 68-181 (312)
157 2hqs_A Protein TOLB; TOLB, PAL 93.5 3.4 0.00011 41.6 18.0 110 77-222 225-345 (415)
158 1sq9_A Antiviral protein SKI8; 93.4 1.6 5.5E-05 42.2 14.9 139 76-221 235-395 (397)
159 3zwl_B Eukaryotic translation 93.4 3.3 0.00011 38.9 16.8 109 77-221 221-346 (369)
160 3ei3_B DNA damage-binding prot 93.4 3 0.0001 40.3 16.9 108 77-221 166-282 (383)
161 4a2l_A BT_4663, two-component 93.3 1.4 4.7E-05 48.4 15.8 114 77-222 500-615 (795)
162 2aq5_A Coronin-1A; WD40 repeat 93.3 2.1 7.1E-05 42.1 15.7 112 77-221 84-207 (402)
163 4a2l_A BT_4663, two-component 92.9 2.8 9.5E-05 46.0 17.6 117 77-222 408-527 (795)
164 3mmy_A MRNA export factor; mRN 92.9 1.9 6.4E-05 40.7 14.2 113 77-221 42-160 (368)
165 1vyh_C Platelet-activating fac 92.8 1.1 3.9E-05 44.8 13.2 111 77-222 153-266 (410)
166 2pbi_B Guanine nucleotide-bind 92.8 2.2 7.4E-05 41.7 15.0 108 77-217 243-353 (354)
167 1got_B GT-beta; complex (GTP-b 92.8 2.7 9.4E-05 40.5 15.5 108 77-217 229-339 (340)
168 1k8k_C P40, ARP2/3 complex 41 92.8 0.84 2.9E-05 43.6 11.6 114 77-221 11-127 (372)
169 2ojh_A Uncharacterized protein 92.6 4 0.00014 36.8 15.6 108 77-221 87-206 (297)
170 2ynn_A Coatomer subunit beta'; 92.6 2.7 9.1E-05 39.9 14.9 110 77-221 16-128 (304)
171 4gqb_B Methylosome protein 50; 92.6 5.7 0.0002 38.9 17.8 114 78-222 86-202 (344)
172 1r5m_A SIR4-interacting protei 92.4 1.7 5.9E-05 41.9 13.4 109 77-221 250-361 (425)
173 3ei3_B DNA damage-binding prot 92.4 1.6 5.4E-05 42.4 13.2 112 77-221 121-236 (383)
174 1vyh_C Platelet-activating fac 92.2 0.99 3.4E-05 45.2 11.8 111 77-222 111-224 (410)
175 3iz6_a 40S ribosomal protein R 92.1 9.7 0.00033 37.3 19.3 118 77-221 208-329 (380)
176 3fm0_A Protein CIAO1; WDR39,SG 91.9 5.8 0.0002 38.3 16.7 112 77-221 64-181 (345)
177 3vl1_A 26S proteasome regulato 91.9 5.4 0.00018 38.8 16.5 128 76-222 141-279 (420)
178 2ynn_A Coatomer subunit beta'; 91.9 8.5 0.00029 36.3 19.0 129 56-221 40-172 (304)
179 1sq9_A Antiviral protein SKI8; 91.7 2.5 8.5E-05 40.8 13.7 130 76-222 188-323 (397)
180 3mkq_A Coatomer beta'-subunit; 91.7 8.2 0.00028 41.4 19.0 129 56-221 40-172 (814)
181 3pe7_A Oligogalacturonate lyas 91.5 3.8 0.00013 39.6 14.7 72 77-165 190-273 (388)
182 2pbi_B Guanine nucleotide-bind 91.4 6.6 0.00023 38.2 16.6 111 78-221 200-315 (354)
183 4e54_B DNA damage-binding prot 91.4 2.6 9.1E-05 42.2 14.0 115 78-222 123-241 (435)
184 2pm9_A Protein WEB1, protein t 91.4 3.4 0.00011 40.1 14.3 114 76-222 216-338 (416)
185 1erj_A Transcriptional repress 91.3 4.6 0.00016 39.8 15.4 116 77-221 168-287 (393)
186 3k26_A Polycomb protein EED; W 91.2 4.1 0.00014 38.4 14.4 113 77-221 72-192 (366)
187 3ott_A Two-component system se 91.0 5 0.00017 43.7 16.7 112 77-222 474-587 (758)
188 1r5m_A SIR4-interacting protei 91.0 3.4 0.00012 39.7 13.8 122 77-221 48-180 (425)
189 2xyi_A Probable histone-bindin 90.8 2.3 7.7E-05 42.7 12.8 113 76-221 233-353 (430)
190 4e54_B DNA damage-binding prot 90.7 1.8 6.2E-05 43.4 11.9 112 77-221 167-282 (435)
191 4g56_B MGC81050 protein; prote 90.7 3.6 0.00012 40.2 13.9 114 77-222 142-259 (357)
192 4h5i_A Guanine nucleotide-exch 90.7 2.4 8.3E-05 41.7 12.7 69 137-221 272-343 (365)
193 3odt_A Protein DOA1; ubiquitin 90.6 10 0.00035 34.7 17.4 109 76-222 186-297 (313)
194 2vdu_B TRNA (guanine-N(7)-)-me 90.5 3.1 0.0001 41.8 13.4 113 76-221 151-271 (450)
195 3dw8_B Serine/threonine-protei 90.5 12 0.0004 36.6 17.4 139 77-222 229-374 (447)
196 3lrv_A PRE-mRNA-splicing facto 90.5 12 0.00042 35.7 17.3 115 77-221 173-292 (343)
197 4aez_A CDC20, WD repeat-contai 90.4 13 0.00044 36.5 17.6 111 76-222 261-381 (401)
198 2xyi_A Probable histone-bindin 90.4 3.5 0.00012 41.3 13.7 120 76-221 130-263 (430)
199 3o4h_A Acylamino-acid-releasin 90.2 1.3 4.6E-05 46.2 10.8 116 78-222 153-276 (582)
200 3azo_A Aminopeptidase; POP fam 90.2 3.5 0.00012 43.5 14.1 74 77-165 190-274 (662)
201 4aow_A Guanine nucleotide-bind 90.2 9.9 0.00034 35.4 15.9 116 77-220 218-336 (340)
202 1k8k_C P40, ARP2/3 complex 41 90.0 2.3 7.8E-05 40.5 11.4 123 76-221 144-274 (372)
203 3frx_A Guanine nucleotide-bind 89.8 14 0.00046 35.2 16.8 110 77-222 110-228 (319)
204 4g56_B MGC81050 protein; prote 89.7 5.9 0.0002 38.7 14.5 114 77-221 97-213 (357)
205 3mkq_A Coatomer beta'-subunit; 89.7 11 0.00037 40.4 17.7 111 77-221 143-259 (814)
206 3f3f_A Nucleoporin SEH1; struc 89.6 4.1 0.00014 37.5 12.6 112 77-221 14-143 (351)
207 3fm0_A Protein CIAO1; WDR39,SG 89.4 2.3 7.7E-05 41.3 11.0 113 77-221 19-136 (345)
208 4aez_A CDC20, WD repeat-contai 89.3 16 0.00056 35.7 17.4 70 136-221 219-293 (401)
209 3vl1_A 26S proteasome regulato 89.0 5.3 0.00018 38.9 13.5 107 81-222 104-213 (420)
210 2xzm_R RACK1; ribosome, transl 88.8 17 0.00057 34.8 16.8 111 77-220 121-243 (343)
211 4aow_A Guanine nucleotide-bind 88.5 16 0.00053 34.0 17.9 76 77-165 41-117 (340)
212 3dm0_A Maltose-binding peripla 88.4 8.7 0.0003 41.0 15.7 116 77-224 475-595 (694)
213 3lrv_A PRE-mRNA-splicing facto 87.9 18 0.0006 34.6 16.3 111 77-222 128-245 (343)
214 2vdu_B TRNA (guanine-N(7)-)-me 87.8 9.9 0.00034 38.0 14.9 112 77-222 105-230 (450)
215 2z3z_A Dipeptidyl aminopeptida 87.8 7.9 0.00027 41.1 14.9 116 76-221 259-391 (706)
216 3frx_A Guanine nucleotide-bind 87.7 19 0.00066 34.1 17.8 111 77-221 68-185 (319)
217 3vu4_A KMHSV2; beta-propeller 87.3 15 0.0005 35.7 15.4 125 77-220 198-335 (355)
218 1yfq_A Cell cycle arrest prote 87.2 3.1 0.00011 39.1 10.2 113 77-221 14-131 (342)
219 1nr0_A Actin interacting prote 87.2 7.3 0.00025 41.1 14.1 117 76-221 450-567 (611)
220 3azo_A Aminopeptidase; POP fam 87.0 15 0.00051 38.6 16.3 84 76-170 243-332 (662)
221 3jrp_A Fusion protein of prote 86.8 4.5 0.00015 38.3 11.1 112 77-221 14-134 (379)
222 3k26_A Polycomb protein EED; W 86.6 21 0.00071 33.3 17.6 75 76-165 117-192 (366)
223 3dm0_A Maltose-binding peripla 86.5 23 0.00078 37.7 17.6 115 77-222 433-551 (694)
224 1pgu_A Actin interacting prote 86.4 25 0.00086 35.7 17.3 114 76-221 448-572 (615)
225 4a11_B DNA excision repair pro 86.0 24 0.00082 33.5 16.3 87 77-165 189-276 (408)
226 3pe7_A Oligogalacturonate lyas 85.9 2.9 0.0001 40.3 9.4 125 78-221 241-384 (388)
227 2pm7_B Protein transport prote 85.7 12 0.00042 35.0 13.5 111 78-221 13-132 (297)
228 3sfz_A APAF-1, apoptotic pepti 85.3 9 0.00031 43.6 14.4 77 77-171 618-697 (1249)
229 2pm9_A Protein WEB1, protein t 85.3 8.8 0.0003 37.0 12.6 122 77-221 116-249 (416)
230 2ecf_A Dipeptidyl peptidase IV 84.6 23 0.00078 37.7 16.4 69 77-165 111-181 (741)
231 3v7d_B Cell division control p 84.4 33 0.0011 33.8 19.4 109 77-222 313-422 (464)
232 4gga_A P55CDC, cell division c 84.3 18 0.00063 35.6 14.7 107 77-220 150-260 (420)
233 3dwl_C Actin-related protein 2 84.2 3.2 0.00011 39.9 8.7 112 77-220 58-176 (377)
234 2ecf_A Dipeptidyl peptidase IV 84.2 9.4 0.00032 40.7 13.2 82 76-165 38-138 (741)
235 3sfz_A APAF-1, apoptotic pepti 84.1 20 0.00068 40.8 16.6 109 77-220 660-773 (1249)
236 3i2n_A WD repeat-containing pr 84.0 4 0.00014 38.4 9.1 104 82-221 176-291 (357)
237 2xzm_R RACK1; ribosome, transl 83.9 15 0.00053 35.1 13.5 112 78-222 25-150 (343)
238 1pgu_A Actin interacting prote 83.9 5.5 0.00019 40.8 10.8 110 76-220 490-613 (615)
239 4ggc_A P55CDC, cell division c 83.8 26 0.00089 32.1 15.7 147 36-221 29-181 (318)
240 3v7d_B Cell division control p 83.4 16 0.00056 36.1 13.8 72 81-170 275-349 (464)
241 4h5i_A Guanine nucleotide-exch 83.3 3.6 0.00012 40.5 8.8 69 78-163 273-341 (365)
242 3odt_A Protein DOA1; ubiquitin 83.3 23 0.00078 32.3 13.9 68 77-163 21-88 (313)
243 3c5m_A Oligogalacturonate lyas 83.2 16 0.00054 34.9 13.3 119 77-222 240-385 (396)
244 2z3z_A Dipeptidyl aminopeptida 83.1 28 0.00097 36.7 16.4 69 78-165 313-391 (706)
245 3dwl_C Actin-related protein 2 83.0 2.4 8.2E-05 40.8 7.2 130 77-223 103-238 (377)
246 3i2n_A WD repeat-containing pr 82.7 13 0.00045 34.7 12.2 76 76-164 211-290 (357)
247 3jrp_A Fusion protein of prote 82.7 32 0.0011 32.2 17.9 113 76-221 103-240 (379)
248 1nr0_A Actin interacting prote 82.0 36 0.0012 35.7 16.5 78 77-165 193-270 (611)
249 3dw8_B Serine/threonine-protei 81.9 20 0.0007 34.8 13.7 127 77-221 180-315 (447)
250 1xfd_A DIP, dipeptidyl aminope 81.9 18 0.00062 38.2 14.2 72 76-165 62-143 (723)
251 3c5m_A Oligogalacturonate lyas 81.8 26 0.00087 33.4 14.1 72 77-165 190-273 (396)
252 2hes_X YDR267CP; beta-propelle 80.6 17 0.00059 34.7 12.4 71 77-163 110-182 (330)
253 2hes_X YDR267CP; beta-propelle 80.5 19 0.00066 34.3 12.7 111 77-220 61-183 (330)
254 3o4h_A Acylamino-acid-releasin 80.2 8.9 0.0003 39.8 10.9 34 138-171 153-192 (582)
255 2xdw_A Prolyl endopeptidase; a 79.4 70 0.0024 34.2 18.0 74 77-164 173-267 (710)
256 2j04_A TAU60, YPL007P, hypothe 79.3 70 0.0024 34.6 17.7 75 77-165 132-211 (588)
257 2j04_A TAU60, YPL007P, hypothe 79.2 16 0.00054 39.7 12.6 73 137-222 88-161 (588)
258 3bg1_A Protein SEC13 homolog; 79.1 17 0.00058 34.4 11.8 111 78-221 17-136 (316)
259 2oit_A Nucleoporin 214KDA; NH2 78.6 5.1 0.00018 40.8 8.3 116 77-222 95-224 (434)
260 3ott_A Two-component system se 78.3 45 0.0015 36.0 16.2 120 77-220 326-447 (758)
261 3gre_A Serine/threonine-protei 76.5 46 0.0016 32.4 14.4 68 82-165 178-245 (437)
262 1yfq_A Cell cycle arrest prote 75.6 51 0.0017 30.5 16.3 121 76-222 152-283 (342)
263 3mmy_A MRNA export factor; mRN 75.6 51 0.0017 30.5 19.3 70 77-165 89-160 (368)
264 4a11_B DNA excision repair pro 75.4 56 0.0019 30.9 17.7 125 78-222 145-277 (408)
265 1xfd_A DIP, dipeptidyl aminope 75.4 9.8 0.00034 40.3 9.7 122 76-220 18-152 (723)
266 3jro_A Fusion protein of prote 75.2 11 0.00038 41.0 10.3 73 77-165 12-86 (753)
267 3gre_A Serine/threonine-protei 74.9 37 0.0013 33.2 13.2 146 56-222 197-360 (437)
268 4a5s_A Dipeptidyl peptidase 4 74.3 12 0.0004 40.6 10.1 118 78-222 20-152 (740)
269 2oaj_A Protein SNI1; WD40 repe 73.1 34 0.0012 38.3 13.8 107 77-222 20-130 (902)
270 3jro_A Fusion protein of prote 72.8 24 0.00084 38.3 12.2 112 77-221 102-238 (753)
271 2gop_A Trilobed protease; beta 71.4 31 0.0011 32.4 11.3 31 137-169 173-213 (347)
272 3sbq_A Nitrous-oxide reductase 71.0 7.1 0.00024 42.5 7.1 78 75-165 323-408 (638)
273 3vu4_A KMHSV2; beta-propeller 70.0 64 0.0022 31.0 13.5 70 136-221 197-271 (355)
274 1z68_A Fibroblast activation p 69.1 10 0.00036 40.3 8.1 73 77-165 18-99 (719)
275 1k32_A Tricorn protease; prote 69.1 30 0.001 39.1 12.2 71 76-165 380-461 (1045)
276 1k32_A Tricorn protease; prote 68.4 39 0.0013 38.1 13.0 29 136-165 380-409 (1045)
277 4a5s_A Dipeptidyl peptidase 4 65.8 26 0.00088 37.9 10.5 69 137-222 321-401 (740)
278 2j04_B YDR362CP, TAU91; beta p 65.1 19 0.00065 37.8 9.0 67 138-221 359-428 (524)
279 2oaj_A Protein SNI1; WD40 repe 64.6 19 0.00066 40.4 9.4 79 79-164 440-518 (902)
280 1z68_A Fibroblast activation p 64.4 33 0.0011 36.3 10.9 67 77-165 62-139 (719)
281 3q7m_A Lipoprotein YFGL, BAMB; 62.8 1.1E+02 0.0037 29.3 13.7 59 84-165 238-296 (376)
282 2xdw_A Prolyl endopeptidase; a 61.4 94 0.0032 33.1 13.8 69 78-165 128-217 (710)
283 4h3o_A Lectin; cadmium, plant 60.0 70 0.0024 26.1 9.9 49 50-99 26-74 (105)
284 2oit_A Nucleoporin 214KDA; NH2 58.8 65 0.0022 32.4 11.5 72 76-165 151-223 (434)
285 4gga_A P55CDC, cell division c 58.6 1.4E+02 0.0047 29.1 15.6 71 77-165 108-178 (420)
286 4gq1_A NUP37; propeller, trans 58.5 83 0.0028 30.7 11.9 126 78-221 140-286 (393)
287 3f3f_A Nucleoporin SEH1; struc 58.2 1.1E+02 0.0036 27.7 13.6 126 77-221 113-249 (351)
288 2bkl_A Prolyl endopeptidase; m 55.8 82 0.0028 33.6 12.1 80 78-171 171-269 (695)
289 1p22_A F-BOX/WD-repeat protein 55.4 1.3E+02 0.0045 29.4 12.8 65 81-165 138-202 (435)
290 2pm7_B Protein transport prote 54.2 1.3E+02 0.0046 27.6 13.1 112 77-221 102-238 (297)
291 2w18_A PALB2, fancn, partner a 50.6 2.1E+02 0.0072 28.8 15.3 132 56-219 208-355 (356)
292 2gop_A Trilobed protease; beta 50.5 1.6E+02 0.0054 27.3 16.7 55 77-151 61-121 (347)
293 3elq_A Arylsulfate sulfotransf 49.3 2.8E+02 0.0095 29.9 14.8 32 190-222 355-386 (571)
294 2ovr_B FBW7, F-BOX/WD repeat p 45.4 2.2E+02 0.0076 27.6 15.1 71 137-221 365-442 (445)
295 3sbq_A Nitrous-oxide reductase 45.2 37 0.0013 37.1 7.0 90 135-228 323-415 (638)
296 2bkl_A Prolyl endopeptidase; m 43.4 2.1E+02 0.007 30.4 12.8 46 61-106 103-157 (695)
297 4gq1_A NUP37; propeller, trans 43.2 51 0.0018 32.2 7.5 70 137-222 139-219 (393)
298 2j04_B YDR362CP, TAU91; beta p 41.8 2.8E+02 0.0095 28.8 13.3 112 77-221 269-386 (524)
299 1p22_A F-BOX/WD-repeat protein 41.0 2.6E+02 0.0089 27.1 15.0 63 138-221 260-325 (435)
300 3iuj_A Prolyl endopeptidase; h 40.5 3.6E+02 0.012 28.6 17.2 34 138-171 237-278 (693)
301 1kv9_A Type II quinohemoprotei 38.6 2.1E+02 0.0072 30.7 12.0 14 138-151 384-398 (668)
302 1xip_A Nucleoporin NUP159; bet 38.6 1.8E+02 0.0061 29.4 10.8 68 77-158 90-158 (388)
303 2ovr_B FBW7, F-BOX/WD repeat p 38.3 2.9E+02 0.0098 26.8 17.7 31 138-170 323-356 (445)
304 3iuj_A Prolyl endopeptidase; h 37.9 2.6E+02 0.0088 29.8 12.6 25 141-165 332-359 (693)
305 3s9j_A Member of DUF4221 famil 36.9 2E+02 0.0068 29.0 10.8 71 83-165 35-110 (369)
306 3mez_B Mannose-specific lectin 35.6 1.5E+02 0.005 24.4 8.1 22 138-159 59-80 (113)
307 1kv9_A Type II quinohemoprotei 34.5 4.5E+02 0.015 28.0 14.7 21 195-215 317-337 (668)
308 4h3o_A Lectin; cadmium, plant 32.0 2E+02 0.0069 23.2 13.1 25 136-160 51-75 (105)
309 1kb0_A Quinohemoprotein alcoho 31.2 5.1E+02 0.018 27.7 15.2 15 138-152 396-411 (677)
310 2xbg_A YCF48-like protein; pho 30.8 3.5E+02 0.012 25.6 14.8 107 77-220 124-233 (327)
311 3dzw_A Agglutinin; lectin, man 30.8 2.1E+02 0.0073 23.1 11.9 22 138-159 52-73 (109)
312 1xip_A Nucleoporin NUP159; bet 30.1 1.7E+02 0.0057 29.6 9.0 115 76-214 39-158 (388)
313 3bg1_A Protein SEC13 homolog; 30.0 1.4E+02 0.0049 27.8 8.0 72 77-164 60-135 (316)
314 2xe4_A Oligopeptidase B; hydro 28.2 3.3E+02 0.011 29.5 11.5 73 78-165 224-304 (751)
315 3s9j_A Member of DUF4221 famil 26.8 2.4E+02 0.0081 28.5 9.3 75 142-226 34-115 (369)
316 1k3i_A Galactose oxidase precu 26.4 5.9E+02 0.02 26.8 15.0 116 77-222 188-324 (656)
317 3a0c_A Mannose/sialic acid-bin 25.8 2.6E+02 0.0091 22.6 8.2 23 138-160 53-75 (110)
318 3b7f_A Glycosyl hydrolase, BNR 25.5 4.6E+02 0.016 25.3 11.2 109 78-222 118-263 (394)
319 1xd5_A Gastrodianin-1, antifun 24.4 2.8E+02 0.0096 22.4 12.3 21 138-159 52-72 (112)
320 3r0e_B Lectin; carbohydrate bi 22.8 2.2E+02 0.0074 23.2 6.8 22 138-159 56-77 (110)
321 1kb0_A Quinohemoprotein alcoho 22.4 7.3E+02 0.025 26.4 17.8 24 195-218 330-354 (677)
322 3mez_A Mannose-specific lectin 21.8 1.6E+02 0.0053 24.2 5.7 23 137-159 51-74 (111)
323 3r0e_A Lectin; carbohydrate bi 21.4 2.8E+02 0.0095 22.5 7.2 19 77-95 50-68 (109)
324 4ggc_A P55CDC, cell division c 20.4 4.6E+02 0.016 23.3 16.4 70 78-165 29-98 (318)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=2.5e-22 Score=215.05 Aligned_cols=150 Identities=25% Similarity=0.319 Sum_probs=125.7
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCc--ccccEEEecccCCccccCCCCccccccCCcc-eEEEc-------
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQ--YSRGRLVAGSFQGYTGHVDGKPNEARFNHPK-GVTMD------- 143 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~--~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~-GIavD------- 143 (486)
..|++|+++++|+ |||+|+.+|+|++++.++.. .....+++|. .|..|+.||.+..++|+.|. |+++|
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~-~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~ 388 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGG-YKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGE 388 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEB-TTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSS
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCC-CCCCcccCCcccccccCCCeEEEEEcccccccc
Confidence 4589999999998 99999999999999877532 1123678886 35677788988999999999 89998
Q ss_pred CCCCEEEEeCCCCEEEEEcCCC-ceEEcCCCCC-------CCCcCCC-CccccccCCCceeEEEcCC-CeEEEEeCCCCe
Q 011435 144 DKGNLYVADTLNLAIRKIGDAG-VTTIAGGKSN-------VAGFRDG-PSEDAKFSNDFDVVYVRPT-CSLLVIDRGNAA 213 (486)
Q Consensus 144 ~dG~LYVAD~~n~rIrkid~~G-v~tiaGg~~g-------~~G~~DG-~~~~a~f~~P~gIa~vd~~-G~LYVaD~gn~r 213 (486)
.+|+|||||+.|||||+|+++| +++++|.... .+||.|| ++..++|+.|.+|+ ++++ |+|||+|.+|+|
T Consensus 389 ~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa-vd~~~g~lyVaD~~N~r 467 (496)
T 3kya_A 389 EEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV-YDDVKEMFYVHDQVGHT 467 (496)
T ss_dssp CCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE-EETTTTEEEEEETTTTE
T ss_pred CCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEE-EECCCCEEEEEeCCCCE
Confidence 7899999999999999999999 8999987431 1478888 88999999999998 5664 999999999999
Q ss_pred EEEEECCCCceee
Q 011435 214 LRQISLNQDDCEY 226 (486)
Q Consensus 214 Ir~id~~G~~~~~ 226 (486)
||+|+++++.|.-
T Consensus 468 Irki~~~~~~~~~ 480 (496)
T 3kya_A 468 IRTISMEQEENVA 480 (496)
T ss_dssp EEEEEECCCC---
T ss_pred EEEEECCCCcccc
Confidence 9999999876544
No 2
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.83 E-value=9.1e-20 Score=191.53 Aligned_cols=143 Identities=22% Similarity=0.316 Sum_probs=121.4
Q ss_pred cceeEEEccCCe-EEEEECCCCEEEEEcCCC--CcccccEEEecccCCccccCCCCccccccCCcceEEE---------c
Q 011435 76 VPYKIRVSEDGE-LFAVDEVNSNIVKITPPL--SQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTM---------D 143 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g--~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIav---------D 143 (486)
.+.+|+++++|+ |||+|..+++|++++.++ .......+++|. .+..|+.||....++|+.|.||++ |
T Consensus 274 ~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~-~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 274 SNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQ-HSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp SCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEEC-TTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred CcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEec-CCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 467899999998 999999999999998763 222345678875 255667778778899999999999 9
Q ss_pred CCCCEEEEeCCCCEEEEEcCCC-ceEEcCCCC-CCCCcCCC-CccccccCCCceeEEEc-CCCeEEEEeCCCCeEEEEEC
Q 011435 144 DKGNLYVADTLNLAIRKIGDAG-VTTIAGGKS-NVAGFRDG-PSEDAKFSNDFDVVYVR-PTCSLLVIDRGNAALRQISL 219 (486)
Q Consensus 144 ~dG~LYVAD~~n~rIrkid~~G-v~tiaGg~~-g~~G~~DG-~~~~a~f~~P~gIa~vd-~~G~LYVaD~gn~rIr~id~ 219 (486)
.+|+|||||+.|++|++|+++| +.+++|... ...||.|| .+..++|+.|.+|+ ++ ++|+|||+|.+|+||++|++
T Consensus 353 ~~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 353 DEYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIA-YDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp CCEEEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEE-EECCCCEEEEEeCCCCEEEEEec
Confidence 9999999999999999999999 899998632 13678888 78889999999998 56 89999999999999999997
Q ss_pred C
Q 011435 220 N 220 (486)
Q Consensus 220 ~ 220 (486)
+
T Consensus 432 e 432 (433)
T 4hw6_A 432 E 432 (433)
T ss_dssp C
T ss_pred C
Confidence 6
No 3
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.80 E-value=9.4e-19 Score=181.76 Aligned_cols=139 Identities=28% Similarity=0.419 Sum_probs=119.5
Q ss_pred ccce-eEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEe
Q 011435 75 VVPY-KIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVAD 152 (486)
Q Consensus 75 ~~P~-GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 152 (486)
..|. +|++++ +|.|||+|..+++|++++.++. ..+++|.. +..|+.+|....++|+.|.||++|++|+|||||
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~-~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad 340 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSA-TQKTVQDGLREEALFAQPNGMTVDEDGNFYIVD 340 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECT-TCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEE
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCC-CCCCcCCCcccccEeCCCeEEEEeCCCCEEEEe
Confidence 3477 999999 6899999999999999999853 56777752 245666776678899999999999999999999
Q ss_pred C-CCCEEEEEc-CCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 153 T-LNLAIRKIG-DAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 153 ~-~n~rIrkid-~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
. .+++|++++ .+| +.+++|.. +..|+.||.+..++|+.|.+|+ ++++|+|||+|.+|++|++|+++
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~~g~~-~~~g~~~g~~~~~~~~~P~gia-vd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTVAGQV-DVASQIDGTPLEATFNYPYDIC-YDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEEEECT-TCBSCCCBSTTTCCBSSEEEEE-ECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCCEEEEEECCCCEEEEEeCCC-CCCCcCCCChhceEeCCceEEE-EcCCCCEEEEECCCCeEEEEEeC
Confidence 9 999999999 788 88888753 3467888888889999999998 78889999999999999999864
No 4
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=2.9e-19 Score=187.28 Aligned_cols=144 Identities=27% Similarity=0.438 Sum_probs=120.2
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCC--cccccEEEecccCCccccCCCCccccccCCcc-eEEE--------
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLS--QYSRGRLVAGSFQGYTGHVDGKPNEARFNHPK-GVTM-------- 142 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~--~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~-GIav-------- 142 (486)
..|.+|+++++|+ |||+|..+++|++++.++. ......+++|. .+..|+.+|....++|+.|. |+++
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~-~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQ-QGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEC-TTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEecc-CCCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 4699999999999 9999999999999988753 22235677775 24556667777788999999 8999
Q ss_pred cCCCCEEEEeCCCCEEEEEcCCC-ceEEcCCCC-CCCCcCCC-CccccccCCCceeEEEcC-CCeEEEEeCCCCeEEEEE
Q 011435 143 DDKGNLYVADTLNLAIRKIGDAG-VTTIAGGKS-NVAGFRDG-PSEDAKFSNDFDVVYVRP-TCSLLVIDRGNAALRQIS 218 (486)
Q Consensus 143 D~dG~LYVAD~~n~rIrkid~~G-v~tiaGg~~-g~~G~~DG-~~~~a~f~~P~gIa~vd~-~G~LYVaD~gn~rIr~id 218 (486)
|++|+|||||+.|++|++|+++| +.+++|... +..||.|| .+..++|+.|.+|+ +++ +|.|||+|.+|+||++|+
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIV-YDEERECFFIGDRENRRIRKIG 427 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEEE
T ss_pred CCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEE-EECCCCEEEEEECCCCeEEEEc
Confidence 46799999999999999999999 888888632 34577787 78889999999998 566 799999999999999999
Q ss_pred CC
Q 011435 219 LN 220 (486)
Q Consensus 219 ~~ 220 (486)
++
T Consensus 428 ~e 429 (430)
T 3tc9_A 428 YE 429 (430)
T ss_dssp EC
T ss_pred cC
Confidence 76
No 5
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=7.9e-17 Score=172.57 Aligned_cols=140 Identities=15% Similarity=0.168 Sum_probs=108.1
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCC-------CCcccc---------cEEEecccCCccccCCCCccccccCCc
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPP-------LSQYSR---------GRLVAGSFQGYTGHVDGKPNEARFNHP 137 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~-------g~~~~~---------~~~vaG~~~G~~G~~dG~~~~a~Ln~P 137 (486)
..|.|+++++ +|.|||+|..+++|++++++ +..... ...+.-. ..-..|
T Consensus 247 ~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~--------------~~~~~p 312 (496)
T 3kya_A 247 KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI--------------ADPSWE 312 (496)
T ss_dssp SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC--------------SSSSCC
T ss_pred CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec--------------CCCCCc
Confidence 4699999999 78899999999999999986 322100 0011100 012368
Q ss_pred ceEEEcCCCC-EEEEeCCCCEEEEEcCCC-c------eEEcCCCCCCCCcCCCCccccccCCCceeEEEc-------CCC
Q 011435 138 KGVTMDDKGN-LYVADTLNLAIRKIGDAG-V------TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVR-------PTC 202 (486)
Q Consensus 138 ~GIavD~dG~-LYVAD~~n~rIrkid~~G-v------~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd-------~~G 202 (486)
.+||+|++|+ |||||+.+|+|++++.++ . ++++|. .+..||.||++..++|+.|.++++++ .+|
T Consensus 313 ~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~-~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g 391 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGG-YKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY 391 (496)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEB-TTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE
T ss_pred eEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCC-CCCCcccCCcccccccCCCeEEEEEccccccccCCC
Confidence 9999999999 899999999999998776 2 577774 35678889999999999999444466 789
Q ss_pred eEEEEeCCCCeEEEEECCCCceeeccc
Q 011435 203 SLLVIDRGNAALRQISLNQDDCEYQYN 229 (486)
Q Consensus 203 ~LYVaD~gn~rIr~id~~G~~~~~~~~ 229 (486)
+|||+|.+|+|||+|+++|...++.+.
T Consensus 392 ~lyVaD~~N~rIr~i~~~G~v~TiaG~ 418 (496)
T 3kya_A 392 DFYFVDRLNFCVRKVTPEGIVSTYAGR 418 (496)
T ss_dssp EEEEEEGGGTEEEEECTTCBEEEEEES
T ss_pred eEEEEECCCCEEEEEeCCCCEEEEecc
Confidence 999999999999999999865555443
No 6
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.71 E-value=1.7e-16 Score=166.57 Aligned_cols=173 Identities=12% Similarity=0.089 Sum_probs=124.3
Q ss_pred CccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCccccc-EEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRG-RLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYV 150 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYV 150 (486)
+..|.|+++|+ +|+|||+|..+++|+++++++.. . ..+... +. ...+.+|++|++|+ |||
T Consensus 227 ~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~---~~~~~~~~--~~------------~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 227 ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGT---LTEEEVMM--DT------------KGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCC---EEEEEEEC--SC------------CSSCEEEEECTTSSEEEE
T ss_pred cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCe---EEEEEecc--CC------------CCCcccEEEeCCCCEEEE
Confidence 46799999999 89999999999999999997322 2 222221 00 12467899999998 999
Q ss_pred EeCCCCEEEEEcCCC-------ceEEcCCCCCCCCcCCCCccccccCCCceeEEE--------cCCCeEEEEeCCCCeEE
Q 011435 151 ADTLNLAIRKIGDAG-------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYV--------RPTCSLLVIDRGNAALR 215 (486)
Q Consensus 151 AD~~n~rIrkid~~G-------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~v--------d~~G~LYVaD~gn~rIr 215 (486)
+|..+++|++++.++ +.+++|. .+..||.||.+..++|+.|.+|+++ +.+|+|||+|.+|++|+
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~-~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~ 368 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQ-HSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVR 368 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEEC-TTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEec-CCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEE
Confidence 999999999998653 2577764 2456888888888999999999843 89999999999999999
Q ss_pred EEECCCCceeecccCC--CCc--ce-EEEEeeeeecceEeeecc-CCcceEEeecCC
Q 011435 216 QISLNQDDCEYQYNSI--SPT--DI-LMVVGAVLVGYVTCMLQQ-GFGPFFFSRTQQ 266 (486)
Q Consensus 216 ~id~~G~~~~~~~~~~--~~~--~i-~t~~g~~~~Gy~l~l~~~-~~g~~~~a~~~~ 266 (486)
+|+++|...++.+.+. ..+ +. ....+.+..+.++|+ + ..|.+++++..+
T Consensus 369 ~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giav--d~~~g~lyVaD~~n 423 (433)
T 4hw6_A 369 VLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAY--DMKRKCFYIGDCDN 423 (433)
T ss_dssp EECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEE--ETTTTEEEEEEGGG
T ss_pred EECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEE--ECCCCEEEEEeCCC
Confidence 9999987555554322 000 00 000001122445555 5 677888888764
No 7
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=2.4e-16 Score=165.09 Aligned_cols=172 Identities=12% Similarity=0.082 Sum_probs=123.1
Q ss_pred CccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
+..|.++++|+ +|.|||+|..+++|+++++++.. ...+... + ....|+||++|++|+ |||+
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---~~~~~~~-----~---------~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---TTPLFTI-----Q---------DSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---EEEEEEC-----S---------SSSCCEEEEECTTSSEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---EEEEEEc-----C---------CCCcceeEEEcCCCCEEEEE
Confidence 45799999999 89999999999999999998532 2122221 0 123799999999999 9999
Q ss_pred eCCCCEEEEEcCCC-------ceEEcCCCCCCCCcCCCCccccccCCCc-eeEEE--------cCCCeEEEEeCCCCeEE
Q 011435 152 DTLNLAIRKIGDAG-------VTTIAGGKSNVAGFRDGPSEDAKFSNDF-DVVYV--------RPTCSLLVIDRGNAALR 215 (486)
Q Consensus 152 D~~n~rIrkid~~G-------v~tiaGg~~g~~G~~DG~~~~a~f~~P~-gIa~v--------d~~G~LYVaD~gn~rIr 215 (486)
|..+++|++++.++ +.+++|. .+..||.||....++|+.|. +++ + |++|+|||+|++|++|+
T Consensus 288 d~~~~~I~~~~~d~~~~~~~~~~~~ag~-~g~~g~~dg~~~~a~~~~P~~gv~-v~~~~y~~~D~~g~lyvaD~~n~~I~ 365 (430)
T 3tc9_A 288 VVNQHYILRSDYDWKTKRLTTPYIVCGQ-QGAKDWVDGVGKKARMHAPRQGTF-VKNPAYKGSSDEYDFYFCDRENHCIR 365 (430)
T ss_dssp ETTTTEEEEEEEETTTTEECCCEEEEEC-TTCBCCBCEEGGGCBBSSEEEEEE-EECGGGTTSSCCEEEEEEEGGGTEEE
T ss_pred ECCCCEEEEEeCCcccccccceEEEecc-CCCCCCCCCCCcceEeCCCcceEE-EccccccccCCCCeEEEEECCCcEEE
Confidence 99999999998765 3566664 24567888888889999999 665 5 56799999999999999
Q ss_pred EEECCCCceeecccCC--CCc--ce-EEEEeeeeecceEeeeccC-CcceEEeecCC
Q 011435 216 QISLNQDDCEYQYNSI--SPT--DI-LMVVGAVLVGYVTCMLQQG-FGPFFFSRTQQ 266 (486)
Q Consensus 216 ~id~~G~~~~~~~~~~--~~~--~i-~t~~g~~~~Gy~l~l~~~~-~g~~~~a~~~~ 266 (486)
+|+.+|...++.+.+. ... +- ....+.+..+.++|+ +. .|.+++++..+
T Consensus 366 ~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giav--d~~~g~lyVaD~~n 420 (430)
T 3tc9_A 366 ILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVY--DEERECFFIGDREN 420 (430)
T ss_dssp EECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEE--ETTTTEEEEEEGGG
T ss_pred EECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEE--ECCCCEEEEEECCC
Confidence 9999886554443311 100 00 000011224556666 44 57888887754
No 8
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=1.1e-14 Score=144.86 Aligned_cols=153 Identities=19% Similarity=0.355 Sum_probs=109.7
Q ss_pred CcEEEcc--CCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCcc
Q 011435 53 GNVLQFE--NGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPN 130 (486)
Q Consensus 53 gsvv~~~--~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~ 130 (486)
+.++.+. .|..+.... ...+..|.||++|++|+|||+|..+++|+++++++.. .....+ +. .+..|. .
T Consensus 69 ~~i~~~d~~~g~~~~~~~--~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~-~~-~~~~g~-----~ 138 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSG--KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLIL-GR-SMQPGS-----D 138 (329)
T ss_dssp CCEEEECTTTCCEEEEEC--TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEE-SB-TTBCCC-----S
T ss_pred CcEEEEECCCCeEEeccC--CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEe-cc-cCCCCC-----C
Confidence 4454443 455554433 2335679999999999999999999999999998642 112333 22 122221 1
Q ss_pred ccccCCcceEEEcC-CCCEEEEeC-CCCEEEEEcCCC-c-eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCC-CeEE
Q 011435 131 EARFNHPKGVTMDD-KGNLYVADT-LNLAIRKIGDAG-V-TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT-CSLL 205 (486)
Q Consensus 131 ~a~Ln~P~GIavD~-dG~LYVAD~-~n~rIrkid~~G-v-~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~-G~LY 205 (486)
...|+.|+||++|+ +|+|||||. .+++|++++.+| + .++..... . .......|..|.+|+ ++++ |+||
T Consensus 139 ~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~-----~-~~~~~~~~~~p~gia-~d~~~g~l~ 211 (329)
T 3fvz_A 139 QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESS-----G-SSPRPGQFSVPHSLA-LVPHLDQLC 211 (329)
T ss_dssp TTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECC-----S-SSCCTTEESCEEEEE-EETTTTEEE
T ss_pred ccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCC-----C-CCCCCcccCCCcEEE-EECCCCEEE
Confidence 34688999999999 899999997 799999999999 3 44422110 0 122346789999998 5665 9999
Q ss_pred EEeCCCCeEEEEECC-CC
Q 011435 206 VIDRGNAALRQISLN-QD 222 (486)
Q Consensus 206 VaD~gn~rIr~id~~-G~ 222 (486)
|+|.++++|++++.+ |.
T Consensus 212 v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 212 VADRENGRIQCFKTDTKE 229 (329)
T ss_dssp EEETTTTEEEEEETTTCC
T ss_pred EEECCCCEEEEEECCCCc
Confidence 999999999999998 65
No 9
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=2.6e-15 Score=155.85 Aligned_cols=175 Identities=18% Similarity=0.199 Sum_probs=123.3
Q ss_pred CccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcc-eEEEcC-CCCEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPK-GVTMDD-KGNLYV 150 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~-GIavD~-dG~LYV 150 (486)
+..|.++++++ +|.|||+|. +++|++++.++.. ..++++. +..|. .-..|. +|++|+ +|+|||
T Consensus 218 ~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~---~~~~~~~--~~~g~--------~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQE---VTLIKQL--ELSGS--------LGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp CSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCC---EEEEEEC--CCCSC--------CCCSSCCEEEEETTTTEEEE
T ss_pred cCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCC---EEEEecc--cccCC--------CCCCccccEEEeCCCCEEEE
Confidence 46799999999 899999986 7799999987542 3444432 11110 012377 999999 688999
Q ss_pred EeCCCCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC-CCCeEEEEE-CCCCceeec
Q 011435 151 ADTLNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR-GNAALRQIS-LNQDDCEYQ 227 (486)
Q Consensus 151 AD~~n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~-gn~rIr~id-~~G~~~~~~ 227 (486)
+|..+++|++++.+| +.+++|.. ...|+.||.+..++|..|.+|+ ++++|+|||+|. ++++|++++ .+|...++.
T Consensus 284 ~d~~~~~I~~~~~~g~~~~~~g~~-~~~g~~dg~~~~~~~~~P~gia-~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGECEWFCGSA-TQKTVQDGLREEALFAQPNGMT-VDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EETTTTEEEEECTTCCEEEEEECT-TCCSCBCEEGGGCBCSSEEEEE-ECTTCCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred EeCCCCEEEEEecCCCEEEEEeCC-CCCCcCCCcccccEeCCCeEEE-EeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 999999999999999 77887753 3567888888889999999998 789999999999 999999999 666533333
Q ss_pred ccCCCCc--ceEEEEeeeeecceEeeeccCCcceEEeecCC
Q 011435 228 YNSISPT--DILMVVGAVLVGYVTCMLQQGFGPFFFSRTQQ 266 (486)
Q Consensus 228 ~~~~~~~--~i~t~~g~~~~Gy~l~l~~~~~g~~~~a~~~~ 266 (486)
+..+... +.....+....+.++|+. ..|.+++++..+
T Consensus 362 g~~~~~g~~~g~~~~~~~~~P~giavd--~~g~lyVad~~n 400 (409)
T 3hrp_A 362 GQVDVASQIDGTPLEATFNYPYDICYD--GEGGYWIAEAWG 400 (409)
T ss_dssp ECTTCBSCCCBSTTTCCBSSEEEEEEC--SSSEEEEEESTT
T ss_pred CCCCCCCcCCCChhceEeCCceEEEEc--CCCCEEEEECCC
Confidence 2211100 000000002234566664 448888888754
No 10
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=1.6e-13 Score=136.29 Aligned_cols=125 Identities=21% Similarity=0.283 Sum_probs=95.8
Q ss_pred CccceeEEEccCCeEEEEECCCC------------------------EEEEEcCCCCcccccEEEecccCCccccCCCCc
Q 011435 74 GVVPYKIRVSEDGELFAVDEVNS------------------------NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKP 129 (486)
Q Consensus 74 ~~~P~GlAVd~dG~LYVaD~~n~------------------------rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~ 129 (486)
+..|.|||+|++|+|||+|..++ +|++++.+.. ......+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~------------- 86 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSG------------- 86 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEEC-------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccC-------------
Confidence 45699999999999999999884 5888887532 2222222
Q ss_pred cccccCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcC-CCeE
Q 011435 130 NEARFNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP-TCSL 204 (486)
Q Consensus 130 ~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~-~G~L 204 (486)
...|+.|.||++|++|+|||+|..+++|++++.+| +.++... +..|. ....|..|.+|+ +++ +|+|
T Consensus 87 -~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~--~~~g~-----~~~~~~~P~~ia-~~~~~g~l 157 (329)
T 3fvz_A 87 -KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRS--MQPGS-----DQNHFCQPTDVA-VEPSTGAV 157 (329)
T ss_dssp -TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBT--TBCCC-----STTCCSSEEEEE-ECTTTCCE
T ss_pred -CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEeccc--CCCCC-----CccccCCCcEEE-EeCCCCeE
Confidence 13478999999999999999999999999999987 2344221 11221 234688999998 676 8999
Q ss_pred EEEeC-CCCeEEEEECCCCc
Q 011435 205 LVIDR-GNAALRQISLNQDD 223 (486)
Q Consensus 205 YVaD~-gn~rIr~id~~G~~ 223 (486)
||+|. ++++|++++.+|..
T Consensus 158 yv~d~~~~~~I~~~~~~g~~ 177 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPSGKF 177 (329)
T ss_dssp EEEECSSCCEEEEECTTSCE
T ss_pred EEEeCCCCCeEEEEcCCCCE
Confidence 99997 89999999988863
No 11
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.54 E-value=4.6e-13 Score=136.07 Aligned_cols=116 Identities=14% Similarity=0.153 Sum_probs=93.6
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+|. +|+||++|..+++|.+++.+|.. .+++.. ..+..|+||++|+ +|.||++|
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l~~---------------~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLW---------------QSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------TTCSCEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc---eEEEEe---------------CCCCCcceEEEecCcCeEEEec
Confidence 4799999996 78899999999999999998653 233321 1367899999997 67799999
Q ss_pred CCC-CEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TLN-LAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~n-~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.+ ++|.+++.+| ..+.... ..+..|+||++...++.|||+|..+++|.+++.+|.
T Consensus 178 ~~~~~~I~r~~~dG~~~~~~~~--------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 178 WGNTPRIEASSMDGSGRRIIAD--------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp CSSSCEEEEEETTSCSCEESCC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCCEEEEEeCCCCCcEEEEE--------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 998 9999999998 3333221 136789999954478999999999999999999985
No 12
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.53 E-value=5.1e-13 Score=128.25 Aligned_cols=116 Identities=16% Similarity=0.298 Sum_probs=93.8
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
..|.+|++|++|+|||+|..+++|++++.++.. ....+. ...+..|.+|++|++|+|||+|..
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~----~~~~~~-------------~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV----LHKFGC-------------SKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTSCE----EEEEEC-------------TTTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE----EEEeCC-------------CCccCCcEEEEECCCCCEEEEECC
Confidence 469999999999999999999999999987532 222221 123568999999999999999999
Q ss_pred CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCC-eEEEEECCCC
Q 011435 155 NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNA-ALRQISLNQD 222 (486)
Q Consensus 155 n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~-rIr~id~~G~ 222 (486)
+++|++++.+| +.++... ..+..|.+|+ ++++|+|||++..++ +|.+++.+|.
T Consensus 184 ~~~i~~~~~~g~~~~~~~~~--------------g~~~~p~~i~-~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 184 AHCVKVFNYEGQYLRQIGGE--------------GITNYPIGVG-INSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp GTEEEEEETTCCEEEEESCT--------------TTSCSEEEEE-ECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred CCEEEEEcCCCCEEEEEccC--------------CccCCCcEEE-ECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 99999999988 4555321 1256799997 788999999999986 9999998875
No 13
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.51 E-value=8.9e-13 Score=136.62 Aligned_cols=115 Identities=15% Similarity=0.174 Sum_probs=93.7
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+|. +|+||++|..+++|.+++++|.. .++++. ..+..|.||++|+ +|.||++|
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~---~~~l~~---------------~~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFR---------------ENGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS---EEEEEE---------------CSSCCEEEEEEETTTTEEEEEE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCc---eEEEEe---------------CCCCCcceEEEecccCeEEEEe
Confidence 5799999997 78899999999999999998653 233332 1367899999998 67799999
Q ss_pred CC-CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TL-NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~-n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
++ +++|++++.+| ..++.. ..+..|+||++...+++|||+|..+++|++++.+|.
T Consensus 221 ~~~~~~I~~~~~dG~~~~~~~~---------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 221 WGTPAKIKKGGLNGVDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp CSSSCCEEEEETTSCSCEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCEEEEEeCCCCccEEEEE---------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 87 58999999999 344432 136789999955478899999999999999999985
No 14
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.50 E-value=9.4e-13 Score=135.54 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=93.6
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+|. +|+||++|..+++|.+++.+|.. .++++. ..|..|+||++|+ +|.||++|
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~---~~~l~~---------------~~l~~P~giavdp~~g~ly~td 220 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLW---------------QSLEKPRAIALHPMEGTIYWTD 220 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS---CEEEEC---------------SSCSCEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc---eEEeec---------------CCCCCCcEEEEEcCCCeEEEec
Confidence 4799999996 78899999999999999998643 233332 1367899999997 66799999
Q ss_pred CCC-CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TLN-LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~n-~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.+ ++|++++.+| ...+... .+..|+||++...+++|||+|..+++|++++.+|.
T Consensus 221 ~~~~~~I~r~~~dG~~~~~~~~~---------------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 221 WGNTPRIEASSMDGSGRRIIADT---------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp CSSSCEEEEEETTSCSCEEEECS---------------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred cCCCCEEEEEeCCCCCcEEEEEC---------------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 998 9999999998 3444321 26789999954478999999999999999999974
No 15
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.50 E-value=9.2e-13 Score=131.58 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=92.4
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+|. +|+||++|..+++|.+++++|.. .++++. ..+..|.||++|+ +|.||++|
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~~---------------~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFR---------------ENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEEE---------------CTTCCEEEEEEETTTTEEEEEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc---eEEEEE---------------CCCCCcceEEeCCCCCEEEEEc
Confidence 5799999995 78899999999999999998642 233322 1256899999997 77799999
Q ss_pred CCC-CEEEEEcCCC-c-eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TLN-LAIRKIGDAG-V-TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~n-~rIrkid~~G-v-~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.++ ++|.+++.+| . ..+.. ..+..|++|++...+++||++|..+++|.+++.+|.
T Consensus 139 ~~~~~~I~~~~~dG~~~~~~~~---------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp CSSSCEEEEEETTSCCEEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCCeEEEEcCCCCCeEEEEE---------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 986 8999999998 3 33322 136789999954467899999999999999999975
No 16
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.49 E-value=9.3e-13 Score=148.37 Aligned_cols=116 Identities=15% Similarity=0.151 Sum_probs=94.4
Q ss_pred CccceeEEEccC-CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEE
Q 011435 74 GVVPYKIRVSED-GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVA 151 (486)
Q Consensus 74 ~~~P~GlAVd~d-G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVA 151 (486)
+..|.|||||.. ++||++|..+++|.+++++|.. .++++. ..|..|.|||||+ .|.||++
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~---~~~l~~---------------~~l~~P~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFR---------------ENGSKPRAIVVDPVHGFMYWT 531 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEEE---------------CTTCCEEEEEEETTTTEEEEE
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe---EEEEEe---------------CCCCCcceEEEecCCCCEEEe
Confidence 457999999975 5899999999999999998653 333332 1366899999998 4789999
Q ss_pred eCCC-CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 152 DTLN-LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 152 D~~n-~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
|+++ ++|.+++.+| ..++.. ..|..|+||++...+++|||+|..+++|++++++|.
T Consensus 532 D~g~~~~I~~~~~dG~~~~~lv~---------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 532 DWGTPAKIKKGGLNGVDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp ECSSSCEEEEEETTSCCEEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCCCeEEEEecCCCceEEEEe---------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 9987 8999999999 344432 236789999955478999999999999999999986
No 17
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.48 E-value=9.6e-13 Score=133.68 Aligned_cols=114 Identities=18% Similarity=0.236 Sum_probs=91.0
Q ss_pred CccceeEEEcc-CCeEEEEECCC-CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVN-SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYV 150 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n-~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 150 (486)
+..|.||++|+ +|.||++|..+ ++|.+++.+|.. .++++. ..+..|+|||+|+ ++.|||
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~---------------~~~~~PnGla~d~~~~~lY~ 219 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---RRIIAD---------------THLFWPNGLTIDYAGRRMYW 219 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEESCC---------------SSCSCEEEEEEETTTTEEEE
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC---cEEEEE---------------CCCCCcceEEEeCCCCEEEE
Confidence 46799999997 78899999998 999999998642 222221 1367899999996 667999
Q ss_pred EeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEE-CCCC
Q 011435 151 ADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIS-LNQD 222 (486)
Q Consensus 151 AD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id-~~G~ 222 (486)
+|+.+++|++++.+| ..++... .+..|.+|++ .++.||++|.++++|.+++ .+|.
T Consensus 220 aD~~~~~I~~~~~dG~~~~~~~~~---------------~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 220 VDAKHHVIERANLDGSHRKAVISQ---------------GLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEECS---------------SCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCC
T ss_pred EECCCCEEEEEeCCCCceEEEEeC---------------CCCCceEEEE--ECCEEEEecCCCCeEEEEEccCCC
Confidence 999999999999988 3444322 2568999985 4689999999999999999 4554
No 18
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.47 E-value=1.6e-12 Score=131.01 Aligned_cols=115 Identities=15% Similarity=0.137 Sum_probs=93.3
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+|. +|+||++|..+++|.+++++|.. .+++.. ..+..|+||++|+ +|.||++|
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l~~---------------~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---RKVLFW---------------QELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------SSCSSEEEEEEEGGGTEEEEEE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---EEEEEe---------------CCCCCccEEEEeCCCCEEEEEe
Confidence 4699999995 78899999999999999998643 233331 1367899999997 67899999
Q ss_pred CC-CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TL-NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~-n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
++ +++|.+++.+| ..++.. ..+..|+||++...+++||++|..+++|++++.+|.
T Consensus 141 ~~~~~~I~r~~~dG~~~~~~~~---------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 141 WGEVPKIERAGMDGSSRFIIIN---------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCCEEEEEEcCCCCeEEEEE---------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 86 79999999998 344432 126789999954468999999999999999999975
No 19
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.47 E-value=2e-12 Score=142.07 Aligned_cols=114 Identities=13% Similarity=0.114 Sum_probs=93.9
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+|. .|+||++|..+++|.+++++|+. .++++. ..|..|.|||+|+ +|.||++|
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~---~~~l~~---------------~~l~~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH---RQVLVW---------------KDLDSPRALALDPAEGFMYWTE 141 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT---CEEEEC---------------SSCCCEEEEEEETTTTEEEEEE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc---EEEEEe---------------CCCCCcccEEEccCCCeEEEeC
Confidence 4699999995 67899999999999999998753 233332 1367899999997 78899999
Q ss_pred CC-CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TL-NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~-n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
++ +++|.+++.+| ...++. .+..|+||++...+++||++|..+++|.+++++|.
T Consensus 142 ~g~~~~I~r~~~dG~~~~~l~~----------------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 142 WGGKPKIDRAAMDGSERTTLVP----------------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC----------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCEEEEEeCCCCceEEEEC----------------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 87 78999999999 455542 26789999955557899999999999999999984
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.46 E-value=4.3e-12 Score=121.91 Aligned_cols=115 Identities=20% Similarity=0.210 Sum_probs=90.2
Q ss_pred ccceeEEEccC-CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSED-GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~d-G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.+|++|++ |.|||+|..+++|.+++.++.. ...+.. ..+..|+||++|+ +|.|||+|
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~---~~~~~~---------------~~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ---RRVLFD---------------TGLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------SSCSSEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC---EEEEEE---------------CCCCCccEEEEeeCCCEEEEEE
Confidence 47999999984 7899999999999999998642 223322 1256899999999 57799999
Q ss_pred CC--CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TL--NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~--n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.. +++|.+++.+| ...+.. ..+..|++|++...++.|||+|.++++|.++++++.
T Consensus 141 ~~~~~~~I~~~~~dg~~~~~~~~---------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTNRRILAQ---------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp CCSSSCEEEEEETTSCCCEEEEC---------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred CCCCCcEEEEEecCCCCcEEEEE---------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 87 68999999888 333321 125679999854446799999999999999999864
No 21
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.44 E-value=3.4e-12 Score=139.96 Aligned_cols=115 Identities=12% Similarity=0.135 Sum_probs=94.7
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+|. .|+||++|..+++|.+++.+|.. .++++. ..|+.|.+||+|+ +|.||++|
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~---~~~l~~---------------~~l~~P~~iavdp~~G~ly~tD 453 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM---RKILIS---------------EDLEEPRAIVLDPMVGYMYWTD 453 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------TTCCSEEEEEEETTTTEEEEEE
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe---EEEEEE---------------CCCCCeeeEEEEcCCCcEEEec
Confidence 5799999995 78899999999999999998753 234432 1378999999998 58999999
Q ss_pred CCC-CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TLN-LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~n-~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+++ .+|.+++.+| ...+.. ..|..|+||++...+++|||+|.++++|++++++|.
T Consensus 454 ~g~~~~I~r~~~dG~~~~~l~~---------------~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 454 WGEIPKIERAALDGSDRVVLVN---------------TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT 511 (619)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred CCCCCEEEEEccCCCccEEEEe---------------CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence 875 8999999999 344432 237789999955468999999999999999999985
No 22
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.44 E-value=4.1e-12 Score=127.92 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=91.2
Q ss_pred CccceeEEEcc-CCeEEEEECC-CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEV-NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYV 150 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~-n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 150 (486)
+..|.||++|+ +|.||++|.. +++|++++++|.. .++++. ..+..|+|||+|+ ++.||+
T Consensus 121 ~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~---------------~~l~~Pnglavd~~~~~lY~ 182 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIIN---------------SEIYWPNGLTLDYEEQKLYW 182 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEEC---------------SSCSCEEEEEEETTTTEEEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEE---------------CCCCCccEEEEeccCCEEEE
Confidence 45799999997 6889999975 7899999998643 233332 1267899999997 667999
Q ss_pred EeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEEC-CCC
Q 011435 151 ADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISL-NQD 222 (486)
Q Consensus 151 AD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~-~G~ 222 (486)
+|+.+++|++++.+| ..++.. ..+..|.+|+ ++ .+.||++|.++++|.++++ +|.
T Consensus 183 aD~~~~~I~~~d~dG~~~~~~~~---------------~~~~~P~gla-v~-~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 183 ADAKLNFIHKSNLDGTNRQAVVK---------------GSLPHPFALT-LF-EDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EETTTTEEEEEETTSCSCEEEEC---------------SCCSCEEEEE-EE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred EECCCCEEEEEcCCCCceEEEec---------------CCCCCceEEE-Ee-CCEEEEEecCCCeEEEEECCCCC
Confidence 999999999999998 445542 1267899998 45 5799999999999999998 454
No 23
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.43 E-value=1e-11 Score=119.15 Aligned_cols=115 Identities=17% Similarity=0.302 Sum_probs=91.6
Q ss_pred ccceeEEE-ccCCeEEEEECC-CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEe
Q 011435 75 VVPYKIRV-SEDGELFAVDEV-NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAV-d~dG~LYVaD~~-n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 152 (486)
..|.+|++ +++|+|||++.. +++|++++.++.. ....+. ..+..|.+|++|++|+|||+|
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~----~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~ 138 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQF----VRKFGA--------------TILQHPRGVTVDNKGRIIVVE 138 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCE----EEEECT--------------TTCSCEEEEEECTTSCEEEEE
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcE----EEEecC--------------ccCCCceEEEEeCCCCEEEEE
Confidence 57999999 589999999975 7899999976432 222221 135689999999999999999
Q ss_pred CCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
..+++|++++.+| +.++... ..+..|.+|+ ++++|+|||+|..+++|++++.++.
T Consensus 139 ~~~~~i~~~~~~g~~~~~~~~~--------------~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~ 195 (286)
T 1q7f_A 139 CKVMRVIIFDQNGNVLHKFGCS--------------KHLEFPNGVV-VNDKQEIFISDNRAHCVKVFNYEGQ 195 (286)
T ss_dssp TTTTEEEEECTTSCEEEEEECT--------------TTCSSEEEEE-ECSSSEEEEEEGGGTEEEEEETTCC
T ss_pred CCCCEEEEEcCCCCEEEEeCCC--------------CccCCcEEEE-ECCCCCEEEEECCCCEEEEEcCCCC
Confidence 9999999999988 3444211 2356799997 7889999999999999999999875
No 24
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.42 E-value=5.4e-12 Score=130.70 Aligned_cols=116 Identities=22% Similarity=0.212 Sum_probs=91.2
Q ss_pred CccceeEEEcc-CCeEEEEECC-CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEV-NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYV 150 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~-n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 150 (486)
+..|.||++|+ +|.||++|.+ +++|.+++++|.. .++++. ..|..|+|||+|+ ++.||+
T Consensus 201 ~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~---~~~~~~---------------~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 201 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVT---------------ENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS---CEEEEC---------------SSCSCEEEEEEETTTTEEEE
T ss_pred CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc---cEEEEE---------------CCCCceEEEEEEeCCCEEEE
Confidence 45799999997 6889999986 4899999998753 233332 1367899999996 567999
Q ss_pred EeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEEC-CCC
Q 011435 151 ADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISL-NQD 222 (486)
Q Consensus 151 AD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~-~G~ 222 (486)
+|+.+++|++++.+| ..++... ...+..|.+|++ .++.||++|.++++|+++++ +|.
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~-------------~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 263 VDSKLHSISSIDVNGGNRKTILED-------------EKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EETTTTEEEEEETTSCCCEEEEEC-------------SSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESSSCC
T ss_pred EECCCCEEEEEeCCCCccEEEEeC-------------CCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcCCCC
Confidence 999999999999998 4555422 134778999984 45799999999999999994 453
No 25
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.42 E-value=6.4e-12 Score=129.29 Aligned_cols=147 Identities=12% Similarity=0.096 Sum_probs=107.9
Q ss_pred CccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVA 151 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVA 151 (486)
+..|.||++|+ +|.||++|..+++|++++++++. ...++.. .+..|.|||+|. +|+||++
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~---~~~~~~~---------------~~~~p~glavd~~~g~lY~~ 176 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSN---VEEVVST---------------GLESPGGLAVDWVHDKLYWT 176 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC---EEEEECS---------------SCSCCCCEEEETTTTEEEEE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC---cEEEEeC---------------CCCCccEEEEEeCCCeEEEE
Confidence 35699999995 78899999999999999998643 3333321 256899999996 6789999
Q ss_pred eCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC-CeEEEEECCCCceeecc
Q 011435 152 DTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN-AALRQISLNQDDCEYQY 228 (486)
Q Consensus 152 D~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn-~rIr~id~~G~~~~~~~ 228 (486)
|..+++|.+++.+| ..++.. ..+..|.+|++...+|.||++|.++ ++|.+++++|...
T Consensus 177 d~~~~~I~~~~~dg~~~~~l~~---------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---- 237 (386)
T 3v65_B 177 DSGTSRIEVANLDGAHRKVLLW---------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR---- 237 (386)
T ss_dssp ETTTTEEEECBTTSCSCEEEEC---------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----
T ss_pred cCCCCeEEEEeCCCCceEEeec---------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc----
Confidence 99999999999998 334432 2367899998544688999999998 9999999998522
Q ss_pred cCCCCcceEEEEee-eeecceEeeeccCCcceEEeecCC
Q 011435 229 NSISPTDILMVVGA-VLVGYVTCMLQQGFGPFFFSRTQQ 266 (486)
Q Consensus 229 ~~~~~~~i~t~~g~-~~~Gy~l~l~~~~~g~~~~a~~~~ 266 (486)
.+++.. +..+.++++.. ..+.++.++...
T Consensus 238 --------~~~~~~~~~~PnGlavd~-~~~~lY~aD~~~ 267 (386)
T 3v65_B 238 --------RIIADTHLFWPNGLTIDY-AGRRMYWVDAKH 267 (386)
T ss_dssp --------EEEECSSCSCEEEEEEEG-GGTEEEEEETTT
T ss_pred --------EEEEECCCCCeeeEEEeC-CCCEEEEEECCC
Confidence 222222 22456666642 345677776543
No 26
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.40 E-value=2e-11 Score=121.88 Aligned_cols=149 Identities=15% Similarity=0.089 Sum_probs=103.2
Q ss_pred CccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcc-cccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQY-SRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYV 150 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~-~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 150 (486)
+..|.||++|+ ++.||++|..+++|++++.++... .....+.. ..+..|.|||+|. +|+|||
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~---------------~~~~~p~glavd~~~~~ly~ 93 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---------------RDIQAPDGLAVDWIHSNIYW 93 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC---------------SSCSCCCEEEEETTTTEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe---------------CCCCCcCEEEEeecCCeEEE
Confidence 34699999997 578999999999999999875210 01122221 1366899999996 678999
Q ss_pred EeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC-CeEEEEECCCCceeec
Q 011435 151 ADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN-AALRQISLNQDDCEYQ 227 (486)
Q Consensus 151 AD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn-~rIr~id~~G~~~~~~ 227 (486)
+|..+++|.+++.+| ..++.. ..+..|.+|++...+|.||++|.++ ++|.+++++|.....
T Consensus 94 ~d~~~~~I~~~~~~g~~~~~~~~---------------~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~- 157 (316)
T 1ijq_A 94 TDSVLGTVSVADTKGVKRKTLFR---------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS- 157 (316)
T ss_dssp EETTTTEEEEEETTSSSEEEEEE---------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE-
T ss_pred EECCCCEEEEEeCCCCceEEEEE---------------CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE-
Confidence 999999999999998 344432 1256899998433589999999986 899999999853221
Q ss_pred ccCCCCcceEEEE-eeeeecceEeeeccCCcceEEeecC
Q 011435 228 YNSISPTDILMVV-GAVLVGYVTCMLQQGFGPFFFSRTQ 265 (486)
Q Consensus 228 ~~~~~~~~i~t~~-g~~~~Gy~l~l~~~~~g~~~~a~~~ 265 (486)
++ ..+..+.++++.. ..+.++.++..
T Consensus 158 -----------~~~~~~~~P~gla~d~-~~~~lY~~D~~ 184 (316)
T 1ijq_A 158 -----------LVTENIQWPNGITLDL-LSGRLYWVDSK 184 (316)
T ss_dssp -----------EECSSCSCEEEEEEET-TTTEEEEEETT
T ss_pred -----------EEECCCCCceEEEEec-cCCEEEEEECC
Confidence 11 1223455666642 34566666654
No 27
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=1.7e-11 Score=115.75 Aligned_cols=114 Identities=20% Similarity=0.329 Sum_probs=89.9
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
..|.+|++|++|+|||+|. +++|+++++++.. ...+.. ..+..|.+|++|++|+|||+|..
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~---~~~~~~---------------~~~~~p~~i~~~~~g~l~v~~~~ 127 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN---QTVLPF---------------DGLNYPEGLAVDTQGAVYVADRG 127 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSC---CEECCC---------------CSCSSEEEEEECTTCCEEEEEGG
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCce---Eeeeec---------------CCcCCCcceEECCCCCEEEEECC
Confidence 5799999999999999998 8899999988543 111111 12557999999999999999999
Q ss_pred CCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 155 NLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 155 n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+++|.+++... ....... ..+..|.+|+ ++++|+|||++..+++|.+++.++.
T Consensus 128 ~~~i~~~~~~~~~~~~~~~--------------~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 128 NNRVVKLAAGSKTQTVLPF--------------TGLNDPDGVA-VDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp GTEEEEECTTCCSCEECCC--------------CSCCSCCCEE-ECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred CCEEEEEECCCceeEeecc--------------ccCCCceeEE-EeCCCCEEEEECCCCEEEEEecCCC
Confidence 99999997655 2222111 1256789997 7889999999999999999999875
No 28
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.40 E-value=6.9e-12 Score=137.51 Aligned_cols=115 Identities=15% Similarity=0.135 Sum_probs=94.2
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+|. +|+||++|..+++|.+++.+|.. .++++. ..|+.|.|||+|+ +|.||++|
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~---~~~l~~---------------~~l~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---RKVLFW---------------QELDQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------SSCSCCCCEEEETTTTEEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC---EEEEEe---------------CCCCCCceEEEecCCCeEEEec
Confidence 4699999998 67899999999999999999753 334432 1377899999998 57799999
Q ss_pred CC-CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TL-NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~-n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
++ +.+|.+++.+| ..++... .+..|+||++...+++|||+|..+++|++++.+|.
T Consensus 146 ~g~~~~I~r~~~dG~~~~~l~~~---------------~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 146 WGEVPKIERAGMDGSSRFIIINS---------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp CSSSCEEEEEETTSCSCEEEECS---------------SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred cCCCCEEEEEECCCCceEEEEeC---------------CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 87 67999999999 4444321 36789999965568999999999999999999985
No 29
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.39 E-value=1.5e-11 Score=118.08 Aligned_cols=113 Identities=14% Similarity=0.178 Sum_probs=89.7
Q ss_pred cceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC-CCEEEEeC
Q 011435 76 VPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK-GNLYVADT 153 (486)
Q Consensus 76 ~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d-G~LYVAD~ 153 (486)
.|+|+++|+ ++.||++|..+++|.+++.++.. ...+.. ..+..|.||++|++ |+|||+|.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~~---------------~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE---PTTIIR---------------QDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCC---CEEEEC---------------TTCCCEEEEEEETTTTEEEEEET
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCC---cEEEEE---------------CCCCCccEEEEEecCCeEEEEEC
Confidence 589999998 57899999999999999998643 223322 12568999999984 67999999
Q ss_pred CCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcC-CCeEEEEeCC--CCeEEEEECCCC
Q 011435 154 LNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP-TCSLLVIDRG--NAALRQISLNQD 222 (486)
Q Consensus 154 ~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~-~G~LYVaD~g--n~rIr~id~~G~ 222 (486)
.+++|.+++.+| ...+... .+..|.+|+ +++ +|.|||+|.+ +++|.+++.+|.
T Consensus 99 ~~~~I~~~~~~g~~~~~~~~~---------------~~~~P~~i~-vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 99 QLDRIEVAKMDGTQRRVLFDT---------------GLVNPRGIV-TDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp TTTEEEEEETTSCSCEEEECS---------------SCSSEEEEE-EETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCCEEEEEEcCCCCEEEEEEC---------------CCCCccEEE-EeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 999999999988 3344321 256799998 555 7999999987 789999999875
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.38 E-value=9.4e-12 Score=117.60 Aligned_cols=146 Identities=16% Similarity=0.255 Sum_probs=103.5
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
..|.+|++|++|+|||+|..+++|++++..+.. ..... ...+..|.+|++|++|+|||+|..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~----~~~~~--------------~~~~~~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT----QTVLP--------------FTGLNDPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS----CEECC--------------CCSCCSCCCEEECTTCCEEEEEGG
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCce----eEeec--------------cccCCCceeEEEeCCCCEEEEECC
Confidence 569999999999999999999999999754221 11111 123568999999999999999999
Q ss_pred CCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCCceeecccCCCC
Q 011435 155 NLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQDDCEYQYNSISP 233 (486)
Q Consensus 155 n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~~~~~~~~~~~~ 233 (486)
+++|.+++.++ ....... ..+..|.+|+ ++++|+|||++..+++|.+++.++.......
T Consensus 170 ~~~i~~~~~~~~~~~~~~~--------------~~~~~p~~i~-~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~----- 229 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPF--------------TDITAPWGIA-VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP----- 229 (270)
T ss_dssp GTEEEEECTTTCCEEECCC--------------SSCCSEEEEE-ECTTCCEEEEETTTSCEEEECTTCSCCEECC-----
T ss_pred CCEEEEEecCCCceEeecc--------------cCCCCceEEE-ECCCCCEEEEECCCCcEEEEcCCCCcceeec-----
Confidence 99999999887 2222111 1246789997 7889999999999999999999875322210
Q ss_pred cceEEEEeeeeecceEeeeccCCcceEEeecCC
Q 011435 234 TDILMVVGAVLVGYVTCMLQQGFGPFFFSRTQQ 266 (486)
Q Consensus 234 ~~i~t~~g~~~~Gy~l~l~~~~~g~~~~a~~~~ 266 (486)
........++++ +..|.++++....
T Consensus 230 ------~~~~~~p~~i~~--~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 230 ------FTGLNTPLAVAV--DSDRTVYVADRGN 254 (270)
T ss_dssp ------CCSCSCEEEEEE--CTTCCEEEEEGGG
T ss_pred ------cCCCCCceeEEE--CCCCCEEEEECCC
Confidence 011112344555 4455688777654
No 31
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.36 E-value=1.7e-11 Score=138.11 Aligned_cols=119 Identities=16% Similarity=0.091 Sum_probs=91.3
Q ss_pred CccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcc-cccEEEecccCCccccCCCCccccccCCcceEEEcCCC-CEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQY-SRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG-NLYV 150 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~-~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG-~LYV 150 (486)
+..|.+|++|. ++.||++|..+++|++++.++... +...+++. ..|..|.|||||..| +|||
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~---------------~~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---------------RDIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC---------------SSCSCCCEEEEETTTTEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe---------------cCCCCcceeeeeecCCcEEE
Confidence 35799999997 688999999999999999885321 12233333 136789999999755 7999
Q ss_pred EeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC-CeEEEEECCCC
Q 011435 151 ADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN-AALRQISLNQD 222 (486)
Q Consensus 151 AD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn-~rIr~id~~G~ 222 (486)
+|..+++|++++.+| ..+++. ..|..|.+||+....|.|||+|.++ ++|.+++++|.
T Consensus 488 tD~~~~~I~v~~ldG~~~~~l~~---------------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKRKTLFR---------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp EETTTTEEEEEETTSSSEEEEEE---------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred EecCCCeEEEEeCCCCeEEEEEe---------------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 999999999999999 344432 2367799998544569999999987 89999999986
No 32
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.35 E-value=9.1e-11 Score=111.51 Aligned_cols=118 Identities=16% Similarity=0.229 Sum_probs=93.3
Q ss_pred CccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC
Q 011435 74 GVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT 153 (486)
Q Consensus 74 ~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 153 (486)
...|.+|++|++|+|||++..++.|++++.++. ...+.. ...+..|.+|++|++|+|||++.
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~----~~~~~~--------------~~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITNTGK----LEEYPL--------------PTNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECTTCC----EEEEEC--------------SSTTCCEEEEEECTTSSEEEEET
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECCCCc----EEEeeC--------------CCCCCCcceEEECCCCCEEEEcc
Confidence 357999999999999999999999999998642 222221 11245799999999999999999
Q ss_pred CCCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 011435 154 LNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQDDC 224 (486)
Q Consensus 154 ~n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~~~ 224 (486)
.+++|.+++.+| +..+... ..+..|.+|+ ++++|+|||++.++++|.++++++...
T Consensus 207 ~~~~i~~~~~~g~~~~~~~~--------------~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~ 263 (300)
T 2qc5_A 207 MGNKIGRITTTGEISEYDIP--------------TPNARPHAIT-AGKNSEIWFTEWGANQIGRITNDNTIQ 263 (300)
T ss_dssp TTTEEEEECTTCCEEEEECS--------------STTCCEEEEE-ECSTTCEEEEETTTTEEEEECTTSCEE
T ss_pred CCCEEEEEcCCCcEEEEECC--------------CCCCCceEEE-ECCCCCEEEeccCCCeEEEECCCCcEE
Confidence 999999999977 4444221 1245788997 788999999999999999999976533
No 33
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.34 E-value=3.3e-11 Score=132.36 Aligned_cols=145 Identities=13% Similarity=0.140 Sum_probs=108.5
Q ss_pred CccceeEEEccC-CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEE
Q 011435 74 GVVPYKIRVSED-GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVA 151 (486)
Q Consensus 74 ~~~P~GlAVd~d-G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVA 151 (486)
+..|.|||+|.. ++||++|..+++|.+++.+|.. ..++.. ..++.|.+||+|+ +|.||++
T Consensus 388 ~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~---~~~l~~---------------~~l~~Pr~iavdp~~g~ly~t 449 (628)
T 4a0p_A 388 EIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRS---VGVVLK---------------GEQDRPRAVVVNPEKGYMYFT 449 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCE---EEEEEE---------------CTTCCEEEEEEETTTTEEEEE
T ss_pred cCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCe---EEEEEe---------------CCCCceeeEEEecCCCeEEEe
Confidence 457999999985 6799999999999999998642 223322 1367899999999 8999999
Q ss_pred eCCCC--EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCCceeec
Q 011435 152 DTLNL--AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQDDCEYQ 227 (486)
Q Consensus 152 D~~n~--rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~~~~~~ 227 (486)
|++++ +|.+++.+| ..++... .+..|++|++...+++||++|..+++|.+++++|.....
T Consensus 450 D~g~~~~~I~r~~~dG~~~~~l~~~---------------~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~- 513 (628)
T 4a0p_A 450 NLQERSPKIERAALDGTEREVLFFS---------------GLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIV- 513 (628)
T ss_dssp EEETTEEEEEEEETTSCSCEEEECS---------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-
T ss_pred ecCCCCCeEEEEeCCCCCcEEEEec---------------cCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEE-
Confidence 99877 799999999 4445331 367899999655578999999999999999999853222
Q ss_pred ccCCCCcceEEEE-eeeeecceEeeeccCCcceEEeecCC
Q 011435 228 YNSISPTDILMVV-GAVLVGYVTCMLQQGFGPFFFSRTQQ 266 (486)
Q Consensus 228 ~~~~~~~~i~t~~-g~~~~Gy~l~l~~~~~g~~~~a~~~~ 266 (486)
+. +.+..++++|+. + +.++.++..+
T Consensus 514 -----------~~~~~~~~P~glav~--~-~~ly~tD~~~ 539 (628)
T 4a0p_A 514 -----------LEDSNILQPVGLTVF--E-NWLYWIDKQQ 539 (628)
T ss_dssp -----------EECSSCSCEEEEEEE--T-TEEEEEETTT
T ss_pred -----------EEcCCCCCcEEEEEE--C-CEEEEEECCC
Confidence 22 122234556653 3 6788887654
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.33 E-value=1.8e-10 Score=109.50 Aligned_cols=116 Identities=14% Similarity=0.158 Sum_probs=92.2
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
..|.+|++|++|+|||++..++.|+++++++. ...+... ..+..|.+|++|++|+|||++..
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~----~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~~ 165 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTADGT----IYEYDLP--------------NKGSYPAFITLGSDNALWFTENQ 165 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTTSC----EEEEECS--------------STTCCEEEEEECTTSSEEEEETT
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCCCC----EEEccCC--------------CCCCCceeEEECCCCCEEEEecC
Confidence 56999999999999999998899999998732 2222210 12457999999999999999999
Q ss_pred CCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 011435 155 NLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQDD 223 (486)
Q Consensus 155 n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~~ 223 (486)
+++|.+++.++ +..+... ..+..|.+|+ ++++|+|||++..+++|.+++.++..
T Consensus 166 ~~~i~~~~~~g~~~~~~~~--------------~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~ 220 (300)
T 2qc5_A 166 NNSIGRITNTGKLEEYPLP--------------TNAAAPVGIT-SGNDGALWFVEIMGNKIGRITTTGEI 220 (300)
T ss_dssp TTEEEEECTTCCEEEEECS--------------STTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCE
T ss_pred CCeEEEECCCCcEEEeeCC--------------CCCCCcceEE-ECCCCCEEEEccCCCEEEEEcCCCcE
Confidence 99999999977 4444321 1245788997 78899999999999999999997653
No 35
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.33 E-value=3.2e-11 Score=119.16 Aligned_cols=116 Identities=18% Similarity=0.166 Sum_probs=89.2
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.||++++ +|+|||+|.. +.|+++++++. ..+.++... + ...++.|++|++|+ +|+|||+|
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g---~~~~~~~~~-------~----~~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEGG---HATQLATSV-------D----GVPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTCE---ECEEEESEE-------T----TEECSCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCCC---EEEEecccC-------C----CCcccccceEEEecCCCEEEEEC
Confidence 4699999997 8999999986 46999998743 244454321 1 13477899999999 99999999
Q ss_pred CCC-----------------CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCC
Q 011435 153 TLN-----------------LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNA 212 (486)
Q Consensus 153 ~~n-----------------~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~ 212 (486)
..+ ++|.++|+++ +..+.. .+..|++|+ ++++| .|||+|..++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----------------~~~~p~gia-~~~dg~~lyv~d~~~~ 207 (322)
T 2fp8_A 145 VSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK----------------ELHVPGGAE-VSADSSFVLVAEFLSH 207 (322)
T ss_dssp SCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE----------------EESCCCEEE-ECTTSSEEEEEEGGGT
T ss_pred CcccccccccceehcccCCCceEEEEeCCCCEEEEecc----------------CCccCcceE-ECCCCCEEEEEeCCCC
Confidence 763 6799999864 444432 256799998 67776 5999999999
Q ss_pred eEEEEECCCC
Q 011435 213 ALRQISLNQD 222 (486)
Q Consensus 213 rIr~id~~G~ 222 (486)
+|++|+.++.
T Consensus 208 ~I~~~~~~~~ 217 (322)
T 2fp8_A 208 QIVKYWLEGP 217 (322)
T ss_dssp EEEEEESSST
T ss_pred eEEEEECCCC
Confidence 9999999863
No 36
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.27 E-value=6.9e-10 Score=105.35 Aligned_cols=116 Identities=17% Similarity=0.224 Sum_probs=91.4
Q ss_pred CccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC
Q 011435 74 GVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT 153 (486)
Q Consensus 74 ~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 153 (486)
...|.+|++|++|.|||++..++.|.++++++. ...+... .....|.+|++|++|+|||++.
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~----~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRITDDGK----IREYELP--------------NKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC----EEEEECS--------------STTCCEEEEEECTTSCEEEEET
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEECCCCC----EEEecCC--------------CCCCCCceEEEcCCCCEEEEeC
Confidence 357999999999999999998899999998532 2332211 1234799999999999999999
Q ss_pred CCCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 154 LNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 154 ~n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.++.|.+++.+| +..+... ..+..|.+++ ++++|+|||++..+++|.++++++.
T Consensus 160 ~~~~i~~~~~~g~~~~~~~~--------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~ 214 (299)
T 2z2n_A 160 QNNAIGRITESGDITEFKIP--------------TPASGPVGIT-KGNDDALWFVEIIGNKIGRITTSGE 214 (299)
T ss_dssp TTTEEEEECTTCCEEEEECS--------------STTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCC
T ss_pred CCCEEEEEcCCCcEEEeeCC--------------CCCCcceeEE-ECCCCCEEEEccCCceEEEECCCCc
Confidence 889999999977 5444221 1245688997 7888999999999999999999664
No 37
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.27 E-value=1.2e-11 Score=137.23 Aligned_cols=115 Identities=15% Similarity=0.186 Sum_probs=90.4
Q ss_pred ccceeEEEc-cCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEe
Q 011435 75 VVPYKIRVS-EDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd-~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 152 (486)
..|.|||+| .+|+|||+|..+++|.++++++.. .++++. ..+..|.||++|+ .|.||++|
T Consensus 453 ~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~---~~~l~~---------------~~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFR---------------EQGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp --CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC---EEEECC---------------CSSCCCCCEECCSSSSCCEECC
T ss_pred CCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc---eEEEEe---------------CCCCCcceEEEccCCCcEEEcc
Confidence 469999999 478899999999999999998642 233332 1256899999998 67899999
Q ss_pred CCC-CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TLN-LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~n-~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+++ ++|.+++.+| ..++.. ..|..|+||++...+++|||+|..+++|.+++++|.
T Consensus 515 ~~~~~~I~~~~~dG~~~~~l~~---------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGVDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CSSSCCEEBCCSSSCCCCEESC---------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred cCCCCeEEEEeCCCCCeeEEEe---------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 876 8999999988 334432 236789999843356899999999999999999874
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.24 E-value=1.1e-09 Score=104.08 Aligned_cols=115 Identities=19% Similarity=0.210 Sum_probs=91.1
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
..|.+|++|++|+|||++..+++|+++++++. ...+... .....|.+|++|++|+|||++..
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~----~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~~ 118 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKKGI----IKEYTLP--------------NPDSAPYGITEGPNGDIWFTEMN 118 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSC----EEEEECS--------------STTCCEEEEEECTTSCEEEEETT
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCCCc----EEEEeCC--------------CcCCCceeeEECCCCCEEEEecC
Confidence 56999999999999999998899999998732 3333210 12347999999999999999998
Q ss_pred CCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 155 NLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 155 n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
++.|.++|++| +..+... .....|.+++ .+++|+|||++..++.|.+++.++.
T Consensus 119 ~~~i~~~d~~g~~~~~~~~--------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~ 172 (299)
T 2z2n_A 119 GNRIGRITDDGKIREYELP--------------NKGSYPSFIT-LGSDNALWFTENQNNAIGRITESGD 172 (299)
T ss_dssp TTEEEEECTTCCEEEEECS--------------STTCCEEEEE-ECTTSCEEEEETTTTEEEEECTTCC
T ss_pred CceEEEECCCCCEEEecCC--------------CCCCCCceEE-EcCCCCEEEEeCCCCEEEEEcCCCc
Confidence 99999999977 4444321 1134688997 7889999999999999999999664
No 39
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.23 E-value=1.3e-10 Score=114.64 Aligned_cols=117 Identities=13% Similarity=0.108 Sum_probs=87.4
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT 153 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 153 (486)
..|.||++++||+ |||+|..+++|++++.++...+...+++. +..|.||++|++|+||||+.
T Consensus 185 ~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-----------------~~gP~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 185 HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-----------------IPNPGNIKRNADGHFWVSSS 247 (322)
T ss_dssp SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-----------------CSSEEEEEECTTSCEEEEEE
T ss_pred ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-----------------CCCCCCeEECCCCCEEEEec
Confidence 5799999999987 99999999999999987533222222221 11299999999999999997
Q ss_pred C----------CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 154 L----------NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 154 ~----------n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
. +++|.+||++| +..+... +| ..+..|.+++. .+|+|||++..+++|.+++++.
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~--------~g----~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEFGNILEVIPLP--------PP----FAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTTSCEEEEEECC--------TT----TTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC--
T ss_pred CcccccccCCCccEEEEECCCCCEEEEEECC--------CC----CccccceEEEE--eCCEEEEeecCCCceEEEeccc
Confidence 6 57899999999 3444321 11 12677888863 4789999999999999999875
Q ss_pred C
Q 011435 222 D 222 (486)
Q Consensus 222 ~ 222 (486)
.
T Consensus 314 ~ 314 (322)
T 2fp8_A 314 K 314 (322)
T ss_dssp -
T ss_pred c
Confidence 3
No 40
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.21 E-value=3.9e-10 Score=109.00 Aligned_cols=128 Identities=14% Similarity=0.096 Sum_probs=96.2
Q ss_pred CCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcc
Q 011435 60 NGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPK 138 (486)
Q Consensus 60 ~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~ 138 (486)
.+..++.+..+. ..|+|+++|++|+ ||++|..+++|+++++++. ...+... ...|.
T Consensus 16 ~~~~~~~l~~~~---~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----~~~~~~~----------------~~~~~ 72 (296)
T 3e5z_A 16 AGAEARRLADGF---TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----LSPEMHP----------------SHHQN 72 (296)
T ss_dssp TTCCCEEEECCC---SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----EEEEESS----------------CSSEE
T ss_pred CCCcEEEEecCC---ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----eEEEECC----------------CCCcc
Confidence 444555555543 3589999999998 9999999999999999753 2333321 23689
Q ss_pred eEEEcCCCCEEEEeCCCCEEEEEcC-CC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC-------
Q 011435 139 GVTMDDKGNLYVADTLNLAIRKIGD-AG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR------- 209 (486)
Q Consensus 139 GIavD~dG~LYVAD~~n~rIrkid~-~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~------- 209 (486)
+|++|++|+|||++..+++|.++|. +| +..+.... ....+..|++++ ++++|+|||+|.
T Consensus 73 ~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~-----------~~~~~~~~~~i~-~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 73 GHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSF-----------EGKKLNSPNDVC-LAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEE-----------TTEECCCCCCEE-ECTTSCEEEEECSHHHHCG
T ss_pred eeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeecc-----------CCCCCCCCCCEE-ECCCCCEEEECCccccccc
Confidence 9999999999999998899999998 66 55554321 113456789997 789999999976
Q ss_pred ----------CCCeEEEEECCCC
Q 011435 210 ----------GNAALRQISLNQD 222 (486)
Q Consensus 210 ----------gn~rIr~id~~G~ 222 (486)
..++|.+++.++.
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~g~ 163 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPDGT 163 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTTSC
T ss_pred cccccccccCCCcEEEEECCCCC
Confidence 2468999998764
No 41
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.20 E-value=8e-11 Score=130.67 Aligned_cols=114 Identities=23% Similarity=0.218 Sum_probs=89.3
Q ss_pred CccceeEEEcc-CCeEEEEECCC-CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC-CCEEE
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVN-SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK-GNLYV 150 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n-~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d-G~LYV 150 (486)
+..|.|||+|+ +|.||++|..+ ++|.+++++|.. .++++. ..|..|+|||+|++ +.|||
T Consensus 495 ~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~---~~~l~~---------------~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 495 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVT---------------ENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC---CCEESC---------------SSCSSCCCEEECTTTCCEEE
T ss_pred CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC---eeEEEe---------------CCCCCccEEEEeccCCEEEE
Confidence 45799999998 57899999876 899999988642 122221 13678999999974 67999
Q ss_pred EeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 151 ADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 151 AD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
+|..+++|++++.+| ..+++.. ...+..|.+|+ ++. +.|||+|..+++|+++++.
T Consensus 557 aD~~~~~I~~~d~dG~~~~~~~~~-------------~~~~~~P~gla-vd~-~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNRKTILED-------------EKRLAHPFSLA-VFE-DKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp EETTTTEEEEECSSSSCCEEECCC-------------SSSCSSCCCCE-EET-TEEEEECSTTTCEEEEETT
T ss_pred EecCCCeEEEEccCCCceEEEEec-------------CCcCCCceEeE-EEC-CEEEEEeCCCCeEEEEEcc
Confidence 999999999999988 4555431 13467899998 454 4899999999999999975
No 42
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.18 E-value=3e-10 Score=111.84 Aligned_cols=112 Identities=18% Similarity=0.176 Sum_probs=86.1
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
..|+|+++|++|+|||+|..+++|+++++++. ...++.. . ..|.||+++++|+|||||..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~----~~~~~~~----~------------~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN----QQIHATV----E------------GKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC----EEEEEEC----S------------SEEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc----eEEEEeC----C------------CCceeEEEcCCCcEEEEecc
Confidence 35999999999999999999999999999853 2333321 0 15999999999999999976
Q ss_pred CC--EEEEEc-CCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 155 NL--AIRKIG-DAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 155 n~--rIrkid-~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
++ +|.+++ .+| +..++... ....|++++ +..++.+||+|..+++|++++..+
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~~--------------~~~~~~g~~-~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTLP--------------DAIFLNGIT-PLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECT--------------TCSCEEEEE-ESSSSEEEEEETTTTEEEEEETTT
T ss_pred CCcceEEEEcCCCCeEEEEEeCC--------------CccccCccc-ccCCCcEEEEECCCCeEEEEeCCC
Confidence 54 588887 455 66555321 123467776 567889999999999999999875
No 43
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.18 E-value=6.7e-10 Score=108.75 Aligned_cols=126 Identities=12% Similarity=0.111 Sum_probs=96.9
Q ss_pred CCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcc
Q 011435 60 NGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPK 138 (486)
Q Consensus 60 ~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~ 138 (486)
.+..++.+.++.. .++|++++++|+ ||++|..+++|+++++++. ...+... -+.|+
T Consensus 33 ~~~~~~~l~~~~~---~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~----~~~~~~~----------------~~~~~ 89 (305)
T 3dr2_A 33 GDARLLTLYDQAT---WSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT----VDVLLDA----------------TAFTN 89 (305)
T ss_dssp TTCCCEEEECCCS---SEEEEEEEGGGTEEEEEETTTTEEEEEETTSC----EEEEEES----------------CSCEE
T ss_pred CCCceEEEecCCc---CccCCeEeCCCCEEEEEECCCCEEEEEeCCCC----EEEEeCC----------------CCccc
Confidence 4556677777644 589999999998 9999999999999998642 3333321 12689
Q ss_pred eEEEcCCCCEEEEeCCCCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC--------
Q 011435 139 GVTMDDKGNLYVADTLNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR-------- 209 (486)
Q Consensus 139 GIavD~dG~LYVAD~~n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~-------- 209 (486)
|+++|++|+|||++..+++|.+++.+| ++.++... ....++.|++++ ++++|+|||+|.
T Consensus 90 gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~-----------~~~~~~~~~~i~-~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 90 GNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRY-----------AGKRLNSPNDLI-VARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEE-----------TTEECSCCCCEE-ECTTSCEEEECCSGGGSCGG
T ss_pred eeeECCCCCEEEEECCCCEEEEECCCCCEEEEEecc-----------CCCccCCCCCEE-ECCCCCEEEeCcCCCccccc
Confidence 999999999999999889999999988 66554321 113467899997 799999999985
Q ss_pred ---------CCCeEEEEECC
Q 011435 210 ---------GNAALRQISLN 220 (486)
Q Consensus 210 ---------gn~rIr~id~~ 220 (486)
..+.|.+++++
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSS
T ss_pred cccccccccCCCeEEEEcCC
Confidence 23678999885
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.16 E-value=2.6e-09 Score=103.11 Aligned_cols=115 Identities=20% Similarity=0.284 Sum_probs=89.2
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC-
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT- 153 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~- 153 (486)
..|.+|+++++|+|||++..+++|.++++... ....+.... ....++.|++|++|++|+|||+|.
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g---~~~~~~~~~-----------~~~~~~~~~~i~~d~~G~l~vtd~~ 134 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREPGG---EWESIADSF-----------EGKKLNSPNDVCLAPDGSLWFSDPT 134 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECSTTC---CEEEEECEE-----------TTEECCCCCCEEECTTSCEEEEECS
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCCCC---cEEEEeecc-----------CCCCCCCCCCEEECCCCCEEEECCc
Confidence 45899999999999999998899999998432 334443321 012467899999999999999985
Q ss_pred ----------------CCCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEE
Q 011435 154 ----------------LNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQ 216 (486)
Q Consensus 154 ----------------~n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~ 216 (486)
..++|++++++| +..+... +..|++++ .+++|+++|++..+++|++
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~----------------~~~~~gi~-~s~dg~~lv~~~~~~~i~~ 197 (296)
T 3e5z_A 135 YGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRD----------------RVKPNGLA-FLPSGNLLVSDTGDNATHR 197 (296)
T ss_dssp HHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECC----------------CSSEEEEE-ECTTSCEEEEETTTTEEEE
T ss_pred cccccccccccccccCCCcEEEEECCCCCEEEeecC----------------CCCCccEE-ECCCCCEEEEeCCCCeEEE
Confidence 246899999887 5555432 45688998 6888877799999999999
Q ss_pred EECC
Q 011435 217 ISLN 220 (486)
Q Consensus 217 id~~ 220 (486)
++.+
T Consensus 198 ~~~~ 201 (296)
T 3e5z_A 198 YCLN 201 (296)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9986
No 45
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.15 E-value=1.7e-09 Score=105.80 Aligned_cols=115 Identities=12% Similarity=0.261 Sum_probs=88.4
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC-
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT- 153 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~- 153 (486)
..|.++++|++|+||+++..+++|.+++.++ ..+.++.... ...++.|++|++|++|+|||+|.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g----~~~~~~~~~~-----------~~~~~~~~~i~~d~dG~l~~td~~ 150 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDADG----QAHLLVGRYA-----------GKRLNSPNDLIVARDGAIWFTDPP 150 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTS----CEEEEECEET-----------TEECSCCCCEEECTTSCEEEECCS
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCCC----CEEEEEeccC-----------CCccCCCCCEEECCCCCEEEeCcC
Confidence 4589999999999999999889999999874 3445543211 12478899999999999999984
Q ss_pred ----------------CCCEEEEEcCC-C-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCC---
Q 011435 154 ----------------LNLAIRKIGDA-G-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGN--- 211 (486)
Q Consensus 154 ----------------~n~rIrkid~~-G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn--- 211 (486)
..+.|++++++ | +..+. . +..|++++ .+++| .|||+|..+
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~----------------~~~p~gl~-~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 151 FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D----------------LDHPNGLA-FSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E----------------ESSEEEEE-ECTTSSEEEEEECCC---
T ss_pred CCccccccccccccccCCCeEEEEcCCCCcEEEEe-c----------------CCCCcceE-EcCCCCEEEEEecCCcCC
Confidence 13679999984 4 55543 2 45689998 56666 599999974
Q ss_pred --CeEEEEECCCC
Q 011435 212 --AALRQISLNQD 222 (486)
Q Consensus 212 --~rIr~id~~G~ 222 (486)
++|++++.++.
T Consensus 213 ~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 213 GSVEITAFAWRDG 225 (305)
T ss_dssp CCCEEEEEEEETT
T ss_pred CCCEEEEEEecCC
Confidence 89999998753
No 46
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.15 E-value=1.3e-09 Score=106.40 Aligned_cols=115 Identities=10% Similarity=0.100 Sum_probs=86.4
Q ss_pred CccceeEEEccCCeEEEEEC-----------CCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEE
Q 011435 74 GVVPYKIRVSEDGELFAVDE-----------VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTM 142 (486)
Q Consensus 74 ~~~P~GlAVd~dG~LYVaD~-----------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIav 142 (486)
...|+++++|++|+|||++. ..+.|+++++++. ...+.. .+..|+||++
T Consensus 97 ~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~----------------~~~~pngi~~ 156 (297)
T 3g4e_A 97 NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFD----------------QVDISNGLDW 156 (297)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEE----------------EESBEEEEEE
T ss_pred CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC----EEEEee----------------ccccccceEE
Confidence 45689999999999999984 3458999998742 333332 2457999999
Q ss_pred cCCCC-EEEEeCCCCEEEEEcC---CC-ce---EEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeE
Q 011435 143 DDKGN-LYVADTLNLAIRKIGD---AG-VT---TIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAAL 214 (486)
Q Consensus 143 D~dG~-LYVAD~~n~rIrkid~---~G-v~---tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rI 214 (486)
+++|+ |||+|+.+++|++++. +| +. .++.-. .....|.+++ +|++|+|||++.++++|
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~-------------~~~~~p~g~~-~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE-------------KEEQIPDGMC-IDAEGKLWVACYNGGRV 222 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC-------------GGGCEEEEEE-EBTTSCEEEEEETTTEE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC-------------CCCCCCCeeE-ECCCCCEEEEEcCCCEE
Confidence 99997 9999999999999974 34 21 121100 0123588997 79999999999999999
Q ss_pred EEEECC-CC
Q 011435 215 RQISLN-QD 222 (486)
Q Consensus 215 r~id~~-G~ 222 (486)
.+++++ |.
T Consensus 223 ~~~d~~tG~ 231 (297)
T 3g4e_A 223 IRLDPVTGK 231 (297)
T ss_dssp EEECTTTCC
T ss_pred EEEcCCCce
Confidence 999997 64
No 47
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.13 E-value=5.2e-10 Score=113.74 Aligned_cols=122 Identities=16% Similarity=0.193 Sum_probs=79.0
Q ss_pred ccceeEEEccC----CeEEEEECCC-----CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC
Q 011435 75 VVPYKIRVSED----GELFAVDEVN-----SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK 145 (486)
Q Consensus 75 ~~P~GlAVd~d----G~LYVaD~~n-----~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d 145 (486)
..|.||++++| |.|||++..+ ++|.+++.++......+++....... ....+.|.+|+++++
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~---------~~~~h~~~~l~~~pd 145 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPAR---------PHGLHSGGRIAFGPD 145 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCC---------TTCCCCCCCEEECTT
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCC---------CCCCcCCceEEECCC
Confidence 46999999997 8899999864 79999997643211222332211100 113557899999999
Q ss_pred CCEEEEeCC-------------CCEEEEEcCCC-ceEEcCCCCCCCCcCC--CC---ccccccCCCceeEEEcC-CCeEE
Q 011435 146 GNLYVADTL-------------NLAIRKIGDAG-VTTIAGGKSNVAGFRD--GP---SEDAKFSNDFDVVYVRP-TCSLL 205 (486)
Q Consensus 146 G~LYVAD~~-------------n~rIrkid~~G-v~tiaGg~~g~~G~~D--G~---~~~a~f~~P~gIa~vd~-~G~LY 205 (486)
|.|||++.. .++|.+|+++| +- .++ -|.+ +. .-..-+.+|++++ +++ +|+||
T Consensus 146 G~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p--~~n-----pf~~~~~~~~~i~a~G~rnp~g~a-~d~~~g~l~ 217 (352)
T 2ism_A 146 GMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA--PGN-----PFLGRRGARPEVYSLGHRNPQGLA-WHPKTGELF 217 (352)
T ss_dssp SCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC--TTC-----TTTTCTTSCTTEEEECCSEECCCE-ECTTTCCEE
T ss_pred CCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC--CCC-----cccCCCCCCccEEEEcCCCcccEE-EECCCCCEE
Confidence 999999742 36899999988 21 110 0100 00 0011256799998 566 89999
Q ss_pred EEeCCCCe
Q 011435 206 VIDRGNAA 213 (486)
Q Consensus 206 VaD~gn~r 213 (486)
|+|.+.++
T Consensus 218 v~d~g~~~ 225 (352)
T 2ism_A 218 SSEHGPSG 225 (352)
T ss_dssp EEEECC--
T ss_pred EEEcCCCC
Confidence 99998887
No 48
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.05 E-value=3.1e-09 Score=104.53 Aligned_cols=106 Identities=15% Similarity=0.193 Sum_probs=77.1
Q ss_pred CccceeEEEccCC-eEEEEECCCCEEEEEcCCCC-cccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEE
Q 011435 74 GVVPYKIRVSEDG-ELFAVDEVNSNIVKITPPLS-QYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVA 151 (486)
Q Consensus 74 ~~~P~GlAVd~dG-~LYVaD~~n~rI~kid~~g~-~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA 151 (486)
+..|+|| ++|| .|||+|..+++|++++.++. ..+...+++ .+..|.||++|++|+||||
T Consensus 168 ~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-----------------~~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 168 FPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-----------------EQTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp SCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-----------------ESCCCSSEEEBTTCCEEEE
T ss_pred CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-----------------ccCCCCCeEECCCCCEEEE
Confidence 3578998 5555 69999999999999998631 111111111 2457999999999999999
Q ss_pred eCCCCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEE---cCCCeEEEEeCCC
Q 011435 152 DTLNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYV---RPTCSLLVIDRGN 211 (486)
Q Consensus 152 D~~n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~v---d~~G~LYVaD~gn 211 (486)
|..+++|++|+++| +..+.... ..+..|.++++. +..+.|||++.++
T Consensus 229 ~~~~~~V~~~~~~G~~~~~~~~~-------------~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 229 THIYNSVVRIAPDRSTTIIAQAE-------------QGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CBTTCCEEEECTTCCEEEEECGG-------------GTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred eCCCCeEEEECCCCCEEEEeecc-------------cccCCceEEEEecccCCCCEEEEECCCC
Confidence 99999999999998 54443210 125679999854 2347999999864
No 49
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.02 E-value=8.3e-09 Score=105.22 Aligned_cols=171 Identities=13% Similarity=0.107 Sum_probs=108.7
Q ss_pred cCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcc
Q 011435 59 ENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPK 138 (486)
Q Consensus 59 ~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~ 138 (486)
..++.++.+.++ +..|.+|++++||+|||+|.. ++|++++.++ . ..+.+.. . ....+..|.
T Consensus 16 ~~~~~~~~va~~---l~~P~~ia~~pdG~l~V~e~~-g~I~~~d~~G----~-~~~~~~~--v--------~~~g~~g~~ 76 (354)
T 3a9g_A 16 EWKFKISEVASD---LEVPWSIAPLGGGRYLVTERP-GRLVLISPSG----K-KLVASFD--V--------ANVGEAGLL 76 (354)
T ss_dssp CCCEEEEEEECS---CSCEEEEEEEETTEEEEEETT-TEEEEECSSC----E-EEEEECC--C--------CCSTTCSEE
T ss_pred CCCeEEEEEeCC---CCCCeEEEEcCCCeEEEEeCC-CEEEEEeCCC----c-eEeeccc--e--------eecCCCcee
Confidence 345677777765 457999999999999999987 8999998653 3 3444321 0 011245799
Q ss_pred eEEEcCC----CCEEEEeCC---C----CEEEEEcCCC----c---eEEcCCCCCCCCcCCCCccccccCCCceeEEEcC
Q 011435 139 GVTMDDK----GNLYVADTL---N----LAIRKIGDAG----V---TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP 200 (486)
Q Consensus 139 GIavD~d----G~LYVAD~~---n----~rIrkid~~G----v---~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~ 200 (486)
||+++++ |.|||++.. + ++|.+++.++ + .++..+.. ......|.+|+ +++
T Consensus 77 gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~-----------~~~~h~~~~l~-~~p 144 (354)
T 3a9g_A 77 GLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP-----------GAYIHNGGRIR-FGP 144 (354)
T ss_dssp EEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE-----------CCSSCCCCCEE-ECT
T ss_pred eEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC-----------CCCCcCCceEE-ECC
Confidence 9999996 889999974 3 7899998654 1 12211100 11234578887 789
Q ss_pred CCeEEEEeCC-------------CCeEEEEECCCCceeecccCCCCcceEEEEeee-eecceEeeeccCCcceEEeecCC
Q 011435 201 TCSLLVIDRG-------------NAALRQISLNQDDCEYQYNSISPTDILMVVGAV-LVGYVTCMLQQGFGPFFFSRTQQ 266 (486)
Q Consensus 201 ~G~LYVaD~g-------------n~rIr~id~~G~~~~~~~~~~~~~~i~t~~g~~-~~Gy~l~l~~~~~g~~~~a~~~~ 266 (486)
+|.|||++.. +++|.+|+++|..- ...-+.. ..+...+ -.++.+++.. ..|.+++++...
T Consensus 145 DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p---~~npf~~--~~i~a~G~rnp~Gla~d~-~~g~l~v~d~g~ 218 (354)
T 3a9g_A 145 DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP---ADNPFPN--SPIWSYGHRNPQGIDWHR-ASGVMVATEHGP 218 (354)
T ss_dssp TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC---TTSSSTT--CCEEEECCSCCCEEEECT-TTCCEEEEECCS
T ss_pred CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC---CCCCCCC--CcEEEEccCCcceEEEeC-CCCCEEEEecCC
Confidence 9999999632 36899999987421 1111101 1122222 2456777743 157788887654
No 50
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.01 E-value=4.2e-09 Score=104.82 Aligned_cols=131 Identities=13% Similarity=0.222 Sum_probs=90.6
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCC----------CEEEEEcCCCCcccccEEEecccCCccccC
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVN----------SNIVKITPPLSQYSRGRLVAGSFQGYTGHV 125 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n----------~rI~kid~~g~~~~~~~~vaG~~~G~~G~~ 125 (486)
++...+..+.++..+ ..|.+++++++|++||++..+ +.|++||+.+.. +....... .|
T Consensus 157 iD~~t~~~~~~i~~g----~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~---v~~~~~~~---~g-- 224 (328)
T 3dsm_A 157 IDTETDKVVDELTIG----IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT---VEKQFKFK---LG-- 224 (328)
T ss_dssp EETTTTEEEEEEECS----SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE---EEEEEECC---TT--
T ss_pred EECCCCeEEEEEEcC----CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe---EEEEEecC---CC--
Confidence 555566666555443 359999999999999999875 899999987432 22111110 01
Q ss_pred CCCccccccCCcceEEEcCCCC-EEEEeCCCCEEEEEcCCCceEEcCCCCCCCCcCCCCccccccCCCceeEEEcC-CCe
Q 011435 126 DGKPNEARFNHPKGVTMDDKGN-LYVADTLNLAIRKIGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP-TCS 203 (486)
Q Consensus 126 dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~n~rIrkid~~Gv~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~-~G~ 203 (486)
..|.+|+++++|+ |||++. .|.++|..+-+... . .+.. .....|.+|+ +++ +++
T Consensus 225 ---------~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~-~-----~~~~-----~~~~~p~gi~-vdp~~g~ 280 (328)
T 3dsm_A 225 ---------DWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPV-R-----PFLE-----FRDTKYYGLT-VNPNNGE 280 (328)
T ss_dssp ---------CCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCS-S-----CSBC-----CCSSCEEEEE-ECTTTCC
T ss_pred ---------CCceeEEEecCCCEEEEEcc---EEEEEECCCCceee-e-----eeec-----CCCCceEEEE-EcCCCCe
Confidence 2699999999776 999986 89999976511110 0 0000 0135799998 564 899
Q ss_pred EEEEe----CCCCeEEEEECCCC
Q 011435 204 LLVID----RGNAALRQISLNQD 222 (486)
Q Consensus 204 LYVaD----~gn~rIr~id~~G~ 222 (486)
|||++ ..+++|.+|+++|.
T Consensus 281 lyva~~~~y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 281 VYVADAIDYQQQGIVYRYSPQGK 303 (328)
T ss_dssp EEEEECTTSSSEEEEEEECTTCC
T ss_pred EEEEcccccccCCEEEEECCCCC
Confidence 99999 88999999999975
No 51
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.99 E-value=2.4e-08 Score=99.32 Aligned_cols=132 Identities=15% Similarity=0.132 Sum_probs=96.6
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEAR 133 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~ 133 (486)
.+++...+..+.++.. +..|.+|+++++|.|||++..++.|.++|+.+.... ..+-.|. ....
T Consensus 67 ~viD~~t~~~~~~i~~----~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~-~~i~~g~------------~~~~ 129 (328)
T 3dsm_A 67 FAIDINTFKEVGRITG----FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT-GYIECPD------------MDME 129 (328)
T ss_dssp EEEETTTCCEEEEEEC----CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE-EEEECTT------------CCTT
T ss_pred EEEECcccEEEEEcCC----CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE-EEEEcCC------------cccc
Confidence 3466777777777743 346999999989999999977889999998753210 0111121 0123
Q ss_pred cCCcceEEEcCCCCEEEEeCC-CCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC
Q 011435 134 FNHPKGVTMDDKGNLYVADTL-NLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR 209 (486)
Q Consensus 134 Ln~P~GIavD~dG~LYVAD~~-n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~ 209 (486)
+..|.+|+++ ++.|||++.+ ++.|.+||... +.++..+ ..|.+++ ++++|+|||++.
T Consensus 130 ~~~p~~i~~~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-----------------~~p~~i~-~~~dG~l~v~~~ 190 (328)
T 3dsm_A 130 SGSTEQMVQY-GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-----------------IQPTSLV-MDKYNKMWTITD 190 (328)
T ss_dssp TCBCCCEEEE-TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-----------------SCBCCCE-ECTTSEEEEEBC
T ss_pred CCCcceEEEE-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-----------------CCccceE-EcCCCCEEEEEC
Confidence 5579999994 7789999984 89999999765 3444321 2478897 688999999999
Q ss_pred CC----------CeEEEEECCC
Q 011435 210 GN----------AALRQISLNQ 221 (486)
Q Consensus 210 gn----------~rIr~id~~G 221 (486)
++ ++|.+|+...
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTT
T ss_pred CCccCCccccCCceEEEEECCC
Confidence 86 8999999874
No 52
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.98 E-value=8.5e-09 Score=104.74 Aligned_cols=172 Identities=13% Similarity=0.141 Sum_probs=105.1
Q ss_pred EEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEE
Q 011435 63 LVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTM 142 (486)
Q Consensus 63 ~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIav 142 (486)
.++.++++ +..|.+|++++||+|||+|.. ++|++++ ++ ....+++.. . ....+..|.||++
T Consensus 22 ~~~~va~~---l~~P~~ia~~pdG~l~V~e~~-g~I~~i~-~g----~~~~~~~~~--v--------~~~g~~~p~gia~ 82 (352)
T 2ism_A 22 RVEEVVGG---LEVPWALAFLPDGGMLIAERP-GRIRLFR-EG----RLSTYAELS--V--------YHRGESGLLGLAL 82 (352)
T ss_dssp CEEEEECC---CSCEEEEEECTTSCEEEEETT-TEEEEEE-TT----EEEEEEECC--C--------CCSTTCSEEEEEE
T ss_pred EEEEEECC---CCCceEEEEcCCCeEEEEeCC-CeEEEEE-CC----CccEeecce--E--------eecCCCCceeEEE
Confidence 34455554 446999999999999999986 8999998 53 234444321 0 0112567999999
Q ss_pred cCC----CCEEEEeCCC-----CEEEEEcCCC--c---eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEe
Q 011435 143 DDK----GNLYVADTLN-----LAIRKIGDAG--V---TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVID 208 (486)
Q Consensus 143 D~d----G~LYVAD~~n-----~rIrkid~~G--v---~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD 208 (486)
+++ |.|||+++.+ ++|.+++.++ + ..+..+.. ........|.+|+ ++++|.|||++
T Consensus 83 ~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p---------~~~~~~h~~~~l~-~~pdG~Lyv~~ 152 (352)
T 2ism_A 83 HPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIP---------ARPHGLHSGGRIA-FGPDGMLYVTT 152 (352)
T ss_dssp CTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEEC---------CCTTCCCCCCCEE-ECTTSCEEEEC
T ss_pred CCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCC---------CCCCCCcCCceEE-ECCCCCEEEEE
Confidence 997 7899999865 7999998664 2 22221100 0011244678897 78999999997
Q ss_pred CC-------------CCeEEEEECCCCcee---ecccCCCCcceEEEEeeeeecceEeeeccCCcceEEeecCC
Q 011435 209 RG-------------NAALRQISLNQDDCE---YQYNSISPTDILMVVGAVLVGYVTCMLQQGFGPFFFSRTQQ 266 (486)
Q Consensus 209 ~g-------------n~rIr~id~~G~~~~---~~~~~~~~~~i~t~~g~~~~Gy~l~l~~~~~g~~~~a~~~~ 266 (486)
.. .++|.+|+++|..-. +.+..+....+ ...| +-.++.+|+..+ .|.+++++...
T Consensus 153 G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i-~a~G-~rnp~g~a~d~~-~g~l~v~d~g~ 223 (352)
T 2ism_A 153 GEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEV-YSLG-HRNPQGLAWHPK-TGELFSSEHGP 223 (352)
T ss_dssp CCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTE-EEEC-CSEECCCEECTT-TCCEEEEEECC
T ss_pred CCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccE-EEEc-CCCcccEEEECC-CCCEEEEEcCC
Confidence 32 368999999873110 00000011111 1111 224566776431 47788887643
No 53
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=1.3e-08 Score=101.69 Aligned_cols=169 Identities=12% Similarity=0.137 Sum_probs=99.6
Q ss_pred ccceeEEEcc-CCeEEEEEC---CCCEEEEEcCCCCcccccEEEecccCCc-c--c--cCCCCcc-----cc----ccCC
Q 011435 75 VVPYKIRVSE-DGELFAVDE---VNSNIVKITPPLSQYSRGRLVAGSFQGY-T--G--HVDGKPN-----EA----RFNH 136 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~---~n~rI~kid~~g~~~~~~~~vaG~~~G~-~--G--~~dG~~~-----~a----~Ln~ 136 (486)
..|.+|++|+ +|.+||+|. .++.|++++.++.. ...+....... . + ..+|... .. -...
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~---~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 196 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL---AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLG 196 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC---EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCC
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC---EEEEecCCCcccccccceeECCEEEEeccCCCceeceecc
Confidence 4689999996 578999999 88999999986432 22222110000 0 0 0111100 00 1146
Q ss_pred cceEEEcCCCC-EEEEeCCCCEEEEEcCCCceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEE
Q 011435 137 PKGVTMDDKGN-LYVADTLNLAIRKIGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALR 215 (486)
Q Consensus 137 P~GIavD~dG~-LYVAD~~n~rIrkid~~Gv~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr 215 (486)
|+||+++++|+ ||++|...++|++++.+.+.. +......-+. ..........|.+++ +|++|+|||++..+++|.
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~g~pdgia-~d~~G~l~va~~~~~~V~ 272 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSN--LQLTDAELGS-KIERYSEKPICDGIS-IDKDHNIYVGDLAHSAIG 272 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTC--TTCCHHHHHT-TCEEEEECCSCSCEE-ECTTCCEEEEEGGGTEEE
T ss_pred cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcC--CCCChhhhhc-ceEecccCCCCceEE-ECCCCCEEEEccCCCeEE
Confidence 89999999997 999999999999997421000 0000000000 000000123588997 789999999999999999
Q ss_pred EEEC-CCCceeecccCCCCcceEEEEee--eeecceEeeeccCCcceEEeecC
Q 011435 216 QISL-NQDDCEYQYNSISPTDILMVVGA--VLVGYVTCMLQQGFGPFFFSRTQ 265 (486)
Q Consensus 216 ~id~-~G~~~~~~~~~~~~~~i~t~~g~--~~~Gy~l~l~~~~~g~~~~a~~~ 265 (486)
+++. +|. +.+++.. +..+.++|+.. .|.++++...
T Consensus 273 ~~d~~~G~-------------~~~~~~~~~~~~p~~va~~~--~g~l~v~~~~ 310 (343)
T 2qe8_A 273 VITSADRA-------------YKLLVTDEKLSWTDSFNFGS--DGYLYFDCNQ 310 (343)
T ss_dssp EEETTTTE-------------EEEEEECGGGSCEEEEEECT--TSCEEEEECC
T ss_pred EEECCCCC-------------EEEEEECCceecCCeeEECC--CCcEEEEeCc
Confidence 9999 663 2223222 23456666654 3566665543
No 54
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.93 E-value=1.5e-08 Score=97.43 Aligned_cols=121 Identities=13% Similarity=0.193 Sum_probs=87.7
Q ss_pred ccceeEEEccCCeEEEE-------ECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC-C
Q 011435 75 VVPYKIRVSEDGELFAV-------DEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK-G 146 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVa-------D~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d-G 146 (486)
..|.++++|++|+||++ |..+++|.++++.+. ....+... ... .....|.+|++|++ |
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~--~~~---------~~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTG---KKTVICKP--EVN---------GYGGIPAGCQCDRDAN 83 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTC---CEEEEECC--EET---------TEECCEEEEEECSSSS
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCC---cEEEEEec--ccC---------CCCCCCceEEEecCCC
Confidence 46999999999999999 888889999997543 23333210 000 01246999999999 9
Q ss_pred CEEEEeCCCCEEEEEcCCC-ceEE-cCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC-------------
Q 011435 147 NLYVADTLNLAIRKIGDAG-VTTI-AGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN------------- 211 (486)
Q Consensus 147 ~LYVAD~~n~rIrkid~~G-v~ti-aGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn------------- 211 (486)
+|||++..+ .|.++|.+| +..+ .... ....+..|++++ ++++|+|||++..+
T Consensus 84 ~l~v~~~~~-~l~~~d~~g~~~~~~~~~~-----------~~~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~~~~~~ 150 (314)
T 1pjx_A 84 QLFVADMRL-GLLVVQTDGTFEEIAKKDS-----------EGRRMQGCNDCA-FDYEGNLWITAPAGEVAPADYTRSMQE 150 (314)
T ss_dssp EEEEEETTT-EEEEEETTSCEEECCSBCT-----------TSCBCBCCCEEE-ECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred cEEEEECCC-CEEEEeCCCCEEEEEeccC-----------CCccccCCcCEE-ECCCCCEEEEecCcccccccccccccC
Confidence 999999754 899999887 4444 3210 012345789997 78999999999876
Q ss_pred --CeEEEEECCCC
Q 011435 212 --AALRQISLNQD 222 (486)
Q Consensus 212 --~rIr~id~~G~ 222 (486)
++|.+++.++.
T Consensus 151 ~~~~l~~~~~~g~ 163 (314)
T 1pjx_A 151 KFGSIYCFTTDGQ 163 (314)
T ss_dssp SCEEEEEECTTSC
T ss_pred CCCeEEEECCCCC
Confidence 68999998754
No 55
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.91 E-value=7.2e-08 Score=94.02 Aligned_cols=127 Identities=17% Similarity=0.155 Sum_probs=91.7
Q ss_pred CCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcce
Q 011435 60 NGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKG 139 (486)
Q Consensus 60 ~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~G 139 (486)
.+..+..+..+. ..|.+++++++|+||+++..++.|+++++++.. ...+... .-..|.+
T Consensus 33 ~~~~~~~~~~~~---~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~---~~~~~~~---------------~~~~~~~ 91 (333)
T 2dg1_A 33 TAEPWLEISKKG---LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE---IKRPFVS---------------HKANPAA 91 (333)
T ss_dssp ECEEEEEEESSC---CCEEEEEECTTSCEEEEETTTCEEEEECTTTCC---EEEEEEC---------------SSSSEEE
T ss_pred ccceeEEEeccC---ccccCcEECCCCCEEEEECCCCEEEEEeCCCCc---EEEEeeC---------------CCCCcce
Confidence 344455554432 358999999999999999999999999987532 2322210 0136899
Q ss_pred EEEcCCCCEEEEeCCC----CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC---
Q 011435 140 VTMDDKGNLYVADTLN----LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG--- 210 (486)
Q Consensus 140 IavD~dG~LYVAD~~n----~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g--- 210 (486)
|++|++|+|||++..+ +.|+++|.++ +..+.... .....|++++ ++++|+|||++..
T Consensus 92 i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------------~~~~~~~~i~-~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 92 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL-------------STAYCIDDMV-FDSKGGFYFTDFRGYS 157 (333)
T ss_dssp EEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS-------------SSCCCEEEEE-ECTTSCEEEEECCCBT
T ss_pred EEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC-------------ccCCcccceE-ECCCCCEEEEeccccc
Confidence 9999999999999876 7999999877 44332210 0124578887 7889999999975
Q ss_pred ---CCeEEEEECCC
Q 011435 211 ---NAALRQISLNQ 221 (486)
Q Consensus 211 ---n~rIr~id~~G 221 (486)
+++|.+++.++
T Consensus 158 ~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 158 TNPLGGVYYVSPDF 171 (333)
T ss_dssp TBCCEEEEEECTTS
T ss_pred cCCCceEEEEeCCC
Confidence 57899998875
No 56
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.90 E-value=7.8e-08 Score=93.80 Aligned_cols=113 Identities=13% Similarity=0.018 Sum_probs=84.3
Q ss_pred cceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 76 VPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 76 ~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
.++|+++++ +|.||++|..+++|+++++++.. ... ... -..|.+|+++++|+|||+.
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---~~~-~~~----------------~~~~~~i~~~~dG~l~v~~-- 71 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---VQR-VTM----------------DAPVSSVALRQSGGYVATI-- 71 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---EEE-EEC----------------SSCEEEEEEBTTSSEEEEE--
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCc---EEE-EeC----------------CCceEEEEECCCCCEEEEE--
Confidence 489999998 57899999999999999987542 222 211 1258899999999999998
Q ss_pred CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC-----------CCCeEEEEECCC
Q 011435 155 NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR-----------GNAALRQISLNQ 221 (486)
Q Consensus 155 n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~-----------gn~rIr~id~~G 221 (486)
++.|.++|.++ ++.++... ....++.|++++ ++++|+|||++. ..++|.+++.++
T Consensus 72 ~~~l~~~d~~~g~~~~~~~~~-----------~~~~~~~~~di~-~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 72 GTKFCALNWKEQSAVVLATVD-----------NDKKNNRFNDGK-VDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TTEEEEEETTTTEEEEEEECC-----------TTCSSEEEEEEE-ECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCeEEEEECCCCcEEEEEecC-----------CCCCCCCCCCEE-ECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 57999999764 55554321 012356789997 799999999984 345788888876
Q ss_pred C
Q 011435 222 D 222 (486)
Q Consensus 222 ~ 222 (486)
.
T Consensus 140 ~ 140 (297)
T 3g4e_A 140 H 140 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 57
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.90 E-value=1.1e-08 Score=104.20 Aligned_cols=126 Identities=10% Similarity=0.127 Sum_probs=81.1
Q ss_pred ccceeEEEccC----CeEEEEECC---C----CEEEEEcCCCC--cccccEEEecccCCccccCCCCccccccCCcceEE
Q 011435 75 VVPYKIRVSED----GELFAVDEV---N----SNIVKITPPLS--QYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVT 141 (486)
Q Consensus 75 ~~P~GlAVd~d----G~LYVaD~~---n----~rI~kid~~g~--~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIa 141 (486)
..|.||+++++ |.|||++.. + ++|.+++.++. .....+++..... ....+.|.+|+
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~-----------~~~~h~~~~l~ 141 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP-----------GAYIHNGGRIR 141 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE-----------CCSSCCCCCEE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC-----------CCCCcCCceEE
Confidence 45999999986 899999974 3 68999987653 1111222222111 11245789999
Q ss_pred EcCCCCEEEEeCC-------------CCEEEEEcCCCceEEcCCCCCCCCcCCCCccccccCCCceeEEEcC-CCeEEEE
Q 011435 142 MDDKGNLYVADTL-------------NLAIRKIGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP-TCSLLVI 207 (486)
Q Consensus 142 vD~dG~LYVAD~~-------------n~rIrkid~~Gv~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~-~G~LYVa 207 (486)
++++|.|||++.. +++|++|+++|- +.... -|.....-..-+.+|++++ +++ +|+|||+
T Consensus 142 ~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~--~p~~n----pf~~~~i~a~G~rnp~Gla-~d~~~g~l~v~ 214 (354)
T 3a9g_A 142 FGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR--PPADN----PFPNSPIWSYGHRNPQGID-WHRASGVMVAT 214 (354)
T ss_dssp ECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC--CCTTS----SSTTCCEEEECCSCCCEEE-ECTTTCCEEEE
T ss_pred ECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC--CCCCC----CCCCCcEEEEccCCcceEE-EeCCCCCEEEE
Confidence 9999999999642 368999999882 00000 0000000011267899998 566 8999999
Q ss_pred eCCCCe---EEEEE
Q 011435 208 DRGNAA---LRQIS 218 (486)
Q Consensus 208 D~gn~r---Ir~id 218 (486)
|.+.++ |.++.
T Consensus 215 d~g~~~~dei~~i~ 228 (354)
T 3a9g_A 215 EHGPVGHDEVNIIL 228 (354)
T ss_dssp ECCSSSCCEEEEEC
T ss_pred ecCCCCCcEEEEec
Confidence 998865 55554
No 58
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.89 E-value=2.8e-08 Score=95.54 Aligned_cols=118 Identities=17% Similarity=0.247 Sum_probs=85.8
Q ss_pred ccceeEEEc----cCC-eEEEEECCCCEEEEEcCCC-CcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCE
Q 011435 75 VVPYKIRVS----EDG-ELFAVDEVNSNIVKITPPL-SQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNL 148 (486)
Q Consensus 75 ~~P~GlAVd----~dG-~LYVaD~~n~rI~kid~~g-~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~L 148 (486)
..|.+++++ ++| .|||+|..+++|++++.+. ........+... . + ..+..|.+|++|++|+|
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~---~--------~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI-P---G--------THEGGADGMDFDEDNNL 239 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC-C---C--------CSSCEEEEEEEBTTCCE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC-C---C--------CCCCCCCceEECCCCCE
Confidence 358999999 999 4999999999999998641 110111122211 0 0 01146999999999999
Q ss_pred EEEeCCCCEEEEEcCC-C--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCe-EEEEeCCCCeEEEEECCC
Q 011435 149 YVADTLNLAIRKIGDA-G--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCS-LLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 149 YVAD~~n~rIrkid~~-G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gn~rIr~id~~G 221 (486)
||++..+++|.++|++ | +..+... ...|.+++ .+++|+ |||++..++.|.+++++.
T Consensus 240 ~v~~~~~~~i~~~d~~~g~~~~~~~~~----------------~~~~~~i~-~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPDGGQPKMRIRCP----------------FEKPSNLH-FKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEETTTEEEEECTTCBSCSEEEECS----------------SSCEEEEE-ECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCEEEEEcCCCCcEeEEEeCC----------------CCCceeEE-ECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999888999999988 6 3444221 14578888 478887 999999999999999874
No 59
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.88 E-value=3.2e-08 Score=96.48 Aligned_cols=119 Identities=10% Similarity=0.114 Sum_probs=86.0
Q ss_pred ccceeEEEccCCeEEEEECC------CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-
Q 011435 75 VVPYKIRVSEDGELFAVDEV------NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN- 147 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~------n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~- 147 (486)
..|.++++|++|+|||++.. .+.|++++.++.. ...+.. .+..|++|+++++|+
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~----------------~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT---VTPIIQ----------------NISVANGIALSTDEKV 195 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC---EEEEEE----------------EESSEEEEEECTTSSE
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE---EEEeec----------------CCCcccceEECCCCCE
Confidence 46899999999999999975 4689999987432 222222 134689999999997
Q ss_pred EEEEeCCCCEEEEEcC--CC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 148 LYVADTLNLAIRKIGD--AG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 148 LYVAD~~n~rIrkid~--~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
|||++..+++|++++. +| +..+.... .... .....|.+++ ++++|+|||++..+++|.++++++.
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~-----~~~~----~~~~~~~~i~-~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATI-----PYYF----TGHEGPDSCC-IDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEE-----EEEC----CSSSEEEEEE-EBTTCCEEEEEETTTEEEEECTTSC
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceE-----EEec----CCCCCCCceE-ECCCCCEEEEEcCCCEEEEECCCCC
Confidence 9999998899999987 44 22221000 0000 0013578887 7899999999999999999999765
No 60
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.88 E-value=1.5e-08 Score=103.37 Aligned_cols=132 Identities=20% Similarity=0.191 Sum_probs=86.4
Q ss_pred ccceeEEE---ccCCeEEE-EEC------------CCCEEEEEcCCCCcccccEEEecccCCccccCCC--CccccccCC
Q 011435 75 VVPYKIRV---SEDGELFA-VDE------------VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDG--KPNEARFNH 136 (486)
Q Consensus 75 ~~P~GlAV---d~dG~LYV-aD~------------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG--~~~~a~Ln~ 136 (486)
..|.||.+ |++|.||| +|. +.+.|+++|++++..++....+.-. +..++ ......+..
T Consensus 63 ~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~----~~~~~~~~~~g~~~~~ 138 (334)
T 2p9w_A 63 QQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFE----KVQDEFEKKAGKRPFG 138 (334)
T ss_dssp EEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESH----HHHHHHHHHHSSCCEE
T ss_pred ceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCc----cccccccccccccccC
Confidence 35799999 79999998 562 3578999998732212233333210 00000 000002345
Q ss_pred cceEEEcCCCCEEEEeCCC-CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCe
Q 011435 137 PKGVTMDDKGNLYVADTLN-LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAA 213 (486)
Q Consensus 137 P~GIavD~dG~LYVAD~~n-~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~r 213 (486)
|++|++|++||+||+|+.. +.|+|++++| +..+.-.. ........++||++.+....|+|++. .++
T Consensus 139 ~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~----------~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~ 207 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES----------GNGGQRPGYSGITFDPHSNKLIAFGG-PRA 207 (334)
T ss_dssp EEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC----------CCSSSCCSCSEEEEETTTTEEEEESS-SSS
T ss_pred CceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC----------CCcccccCcceEEEeCCCCEEEEEcC-CCe
Confidence 8999999999999999999 9999999999 33332110 01122456899996555557888887 999
Q ss_pred EEEEECCC
Q 011435 214 LRQISLNQ 221 (486)
Q Consensus 214 Ir~id~~G 221 (486)
|.+|++..
T Consensus 208 L~~fD~~~ 215 (334)
T 2p9w_A 208 LTAFDVSK 215 (334)
T ss_dssp EEEEECSS
T ss_pred EEEEcCCC
Confidence 99999873
No 61
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=4.3e-09 Score=105.23 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=83.3
Q ss_pred cceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 76 VPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
.|.||++++||+ ||+++...++|++++.+....+... .+....... .......|.||++|++|+|||||..
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~------~~g~~g~pdgia~d~~G~l~va~~~ 267 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLT--DAELGSKIE------RYSEKPICDGISIDKDHNIYVGDLA 267 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCC--HHHHHTTCE------EEEECCSCSCEEECTTCCEEEEEGG
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCC--hhhhhcceE------ecccCCCCceEEECCCCCEEEEccC
Confidence 489999999995 9999999999999974210000000 000000000 0001226999999999999999999
Q ss_pred CCEEEEEcC-CC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEE
Q 011435 155 NLAIRKIGD-AG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIS 218 (486)
Q Consensus 155 n~rIrkid~-~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id 218 (486)
+++|.++|+ +| +.+++.. ..+..|.+++ ++++|.|||++...+++..|.
T Consensus 268 ~~~V~~~d~~~G~~~~~~~~--------------~~~~~p~~va-~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 268 HSAIGVITSADRAYKLLVTD--------------EKLSWTDSFN-FGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp GTEEEEEETTTTEEEEEEEC--------------GGGSCEEEEE-ECTTSCEEEEECCGGGSGGGB
T ss_pred CCeEEEEECCCCCEEEEEEC--------------CceecCCeeE-ECCCCcEEEEeCccccccccc
Confidence 999999999 78 6665532 1367899998 678899999998777665444
No 62
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.83 E-value=9.1e-08 Score=98.41 Aligned_cols=146 Identities=13% Similarity=0.129 Sum_probs=99.0
Q ss_pred ccceeEEEcc--CC--eEEEEECC--CCE--EEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCC
Q 011435 75 VVPYKIRVSE--DG--ELFAVDEV--NSN--IVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG 146 (486)
Q Consensus 75 ~~P~GlAVd~--dG--~LYVaD~~--n~r--I~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG 146 (486)
..|.||.+.. +| .|||+|.. +++ |++++.++. ..+.+.+.. ...|+.|+++++|++|
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~----~~~~~~~~~-----------g~~~~~pND~~v~~~G 176 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK----SLLHLKTIR-----------HKLLPSVNDIVAVGPE 176 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT----EEEEEEEEC-----------CTTCSSEEEEEEEETT
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC----EEEEEeccc-----------cCCCCCCceEEEeCCC
Confidence 4899999965 46 49999987 344 666776643 334443321 1358899999999999
Q ss_pred CEEEEeC-----------------CCCEEEEEcCCCceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEe
Q 011435 147 NLYVADT-----------------LNLAIRKIGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVID 208 (486)
Q Consensus 147 ~LYVAD~-----------------~n~rIrkid~~Gv~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD 208 (486)
.+||++. ..++|++++++.++.++.+ +..|+||++ ++++ .|||+|
T Consensus 177 ~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~----------------l~~pNGia~-spDg~~lYvad 239 (355)
T 3sre_A 177 HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEG----------------FDFANGINI-SPDGKYVYIAE 239 (355)
T ss_dssp EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEE----------------ESSEEEEEE-CTTSSEEEEEE
T ss_pred CEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecC----------------CcccCcceE-CCCCCEEEEEe
Confidence 9999875 2468999988656655543 678999985 5555 899999
Q ss_pred CCCCeEEEEECCCCceeecccCCCCcceEEEEeeeeecceEeeeccC-CcceEEee
Q 011435 209 RGNAALRQISLNQDDCEYQYNSISPTDILMVVGAVLVGYVTCMLQQG-FGPFFFSR 263 (486)
Q Consensus 209 ~gn~rIr~id~~G~~~~~~~~~~~~~~i~t~~g~~~~Gy~l~l~~~~-~g~~~~a~ 263 (486)
+..++|++++.++. +.... ..+.. +.|+...+..+. .|.++++-
T Consensus 240 t~~~~I~~~~~~~~--------g~l~~-~~~~~--~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 240 LLAHKIHVYEKHAN--------WTLTP-LRVLS--FDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp GGGTEEEEEEECTT--------SCEEE-EEEEE--CSSEEEEEEECTTTCCEEEEE
T ss_pred CCCCeEEEEEECCC--------CcEec-CEEEe--CCCCCceEEEeCCCCcEEEEe
Confidence 99999999998742 00001 11111 135555555576 48888854
No 63
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.79 E-value=2e-07 Score=92.50 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=82.7
Q ss_pred ccceeEEEccCCeEEEEECC------CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-
Q 011435 75 VVPYKIRVSEDGELFAVDEV------NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN- 147 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~------n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~- 147 (486)
..+.++++|++|+|||++.. .+.|++++ ++ ....+.. .+..|++|+++++|+
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g----~~~~~~~----------------~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KG----KVTKLFA----------------DISIPNSICFSPDGTT 192 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TT----EEEEEEE----------------EESSEEEEEECTTSCE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CC----cEEEeeC----------------CCcccCCeEEcCCCCE
Confidence 45889999999999999863 46899998 53 2333322 133689999999997
Q ss_pred EEEEeCCCCEEEEEcCC---C-c----eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEEC
Q 011435 148 LYVADTLNLAIRKIGDA---G-V----TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISL 219 (486)
Q Consensus 148 LYVAD~~n~rIrkid~~---G-v----~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~ 219 (486)
|||+|..+++|++++.+ | . ..+... + .....|.+++ +|++|+|||++.++++|.++++
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~--------~-----~~~~~p~gi~-~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS--------T-----GIKGGMDGSV-CDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC--------T-----TSSSEEEEEE-ECTTSCEEEEEETTTEEEEECT
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEEC--------C-----CCCCCCCeeE-ECCCCCEEEEEeCCCEEEEECC
Confidence 99999999999999854 3 1 111110 0 0113477886 7999999999998899999999
Q ss_pred CCC
Q 011435 220 NQD 222 (486)
Q Consensus 220 ~G~ 222 (486)
+|.
T Consensus 259 ~g~ 261 (326)
T 2ghs_A 259 DGN 261 (326)
T ss_dssp TCC
T ss_pred CCC
Confidence 775
No 64
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.76 E-value=9.4e-08 Score=98.29 Aligned_cols=110 Identities=18% Similarity=0.198 Sum_probs=80.8
Q ss_pred ccCccceeEEEccCCeEEEEEC-----------------CCCEEEEEcCCCCcccccEEEecccCCccccCCCCcccccc
Q 011435 72 EIGVVPYKIRVSEDGELFAVDE-----------------VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARF 134 (486)
Q Consensus 72 ~~~~~P~GlAVd~dG~LYVaD~-----------------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~L 134 (486)
..++.|++++++++|.+||++. ..++|+++++. ..++++.. |
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-----~~~~~~~~----------------l 220 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-----DVRVVAEG----------------F 220 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-----CCEEEEEE----------------E
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-----eEEEeecC----------------C
Confidence 3467999999999999999874 34689999873 34555432 6
Q ss_pred CCcceEEEcCCCC-EEEEeCCCCEEEEEcCC--C-ce---EEcCCCCCCCCcCCCCccccccCCCceeEEEcC-CCeEEE
Q 011435 135 NHPKGVTMDDKGN-LYVADTLNLAIRKIGDA--G-VT---TIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP-TCSLLV 206 (486)
Q Consensus 135 n~P~GIavD~dG~-LYVAD~~n~rIrkid~~--G-v~---tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~-~G~LYV 206 (486)
..||||++++||+ |||||+..++|++++.+ | +. .+ .. -..|.+++ +|. +|+|||
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~----------------~g~PDGi~-vD~e~G~lwv 282 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SF----------------DTLVDNIS-VDPVTGDLWV 282 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EC----------------SSEEEEEE-ECTTTCCEEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eC----------------CCCCceEE-EeCCCCcEEE
Confidence 6899999999996 99999999999999753 4 21 22 10 12488887 788 599999
Q ss_pred Ee-CCCCeEEEEECC
Q 011435 207 ID-RGNAALRQISLN 220 (486)
Q Consensus 207 aD-~gn~rIr~id~~ 220 (486)
+. .+..+|.+++++
T Consensus 283 a~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 283 GCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEESCHHHHHSCCTT
T ss_pred EecCCceEEEEECCC
Confidence 76 454555555554
No 65
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.71 E-value=9.5e-08 Score=97.12 Aligned_cols=139 Identities=9% Similarity=-0.012 Sum_probs=90.6
Q ss_pred ccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCC
Q 011435 58 FENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNH 136 (486)
Q Consensus 58 ~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~ 136 (486)
.+.|+.+++++++ +..|.+|++++||+ |||++. .++|++++.++.. ...+++... ........
T Consensus 4 ~p~g~~~~~va~~---l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~---~~~~~~~~~---------v~~~g~~g 67 (353)
T 2g8s_A 4 APATVNVEVLQDK---LDHPWALAFLPDNHGMLITLR-GGELRHWQAGKGL---SAPLSGVPD---------VWAHGQGG 67 (353)
T ss_dssp --CCSEEEEEEEE---ESSEEEEEECSTTCCEEEEET-TTEEEEEETTTEE---CCCCBSCCC---------CCCSTTCS
T ss_pred CCCCcEEEEEECC---CCCcEEEEEcCCCCEEEEEeC-CceEEEEeCCCce---eeEecCCcc---------cccCCCCC
Confidence 4567888888874 45799999999999 999997 4799999876431 111222100 00111336
Q ss_pred cceEEEcC----CCCEEEEeCC-------CCEEEEEcCCC----c---eEEcCCCCCCCCcCCCCccccccCCCceeEEE
Q 011435 137 PKGVTMDD----KGNLYVADTL-------NLAIRKIGDAG----V---TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYV 198 (486)
Q Consensus 137 P~GIavD~----dG~LYVAD~~-------n~rIrkid~~G----v---~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~v 198 (486)
|.||++++ +|.|||+++. .++|.+++.++ + .++..... ........+.+|+ +
T Consensus 68 ~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p---------~~~~~~h~~~~l~-~ 137 (353)
T 2g8s_A 68 LLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMP---------KLSTGNHFGGRLV-F 137 (353)
T ss_dssp EEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSS---------CCBSSSCCCCCEE-E
T ss_pred ceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECC---------CCCCCcccCccEE-E
Confidence 89999998 5889999875 46888886432 1 22221100 0011233577887 7
Q ss_pred cCCCeEEEEeCC-------------CCeEEEEECCCC
Q 011435 199 RPTCSLLVIDRG-------------NAALRQISLNQD 222 (486)
Q Consensus 199 d~~G~LYVaD~g-------------n~rIr~id~~G~ 222 (486)
+++|.|||+... .++|.+|+++|.
T Consensus 138 ~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 138 DGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 899999999633 368999999874
No 66
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.70 E-value=5e-07 Score=92.63 Aligned_cols=171 Identities=13% Similarity=0.067 Sum_probs=105.8
Q ss_pred cEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEE
Q 011435 62 YLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVT 141 (486)
Q Consensus 62 ~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIa 141 (486)
..++++.+| +..|.+|++++||.|||++...++|++++.++. ....+.+.. .. .......|.|||
T Consensus 22 ~~~~~va~g---L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g---~~~~v~~~~-~v--------~~~g~~GllGia 86 (347)
T 3das_A 22 KVLRTVATG---LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG---RKTELGEVP-GV--------SPSGEGGLLGIA 86 (347)
T ss_dssp EEEEEEECC---CSSEEEEEECTTSCEEEEETTTCEEEEECTTTC---CEEEEEECT-TC--------CCBTTBSEEEEE
T ss_pred ceeEEeecC---CCCceEEEEcCCCcEEEEEecCCEEEEEECCCC---cEeeecccC-ce--------eecCCCCceeeE
Confidence 456677766 447999999999999999987899999987532 233333211 00 011245789999
Q ss_pred EcC----CCCEEEEeC--CCCEEEEEcCCC----------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEE
Q 011435 142 MDD----KGNLYVADT--LNLAIRKIGDAG----------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLL 205 (486)
Q Consensus 142 vD~----dG~LYVAD~--~n~rIrkid~~G----------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LY 205 (486)
+++ +|.|||+.+ ..++|.++..++ ..+|..... . ...-....|+ .+++|.||
T Consensus 87 ~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p---------~--~~~H~g~~l~-fgpDG~Ly 154 (347)
T 3das_A 87 LSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIP---------K--GVIHNGGRIA-FGPDKMLY 154 (347)
T ss_dssp ECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEEC---------C--CSSCCCCCEE-ECTTSCEE
T ss_pred eccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCC---------C--CCCccCcccc-CCCCCCEE
Confidence 998 488999864 457899886433 122221100 0 1112345687 78999999
Q ss_pred EEe-------------CCCCeEEEEECCCCceeecccCCCCcceEEEEeeee-ecceEeeeccCCcceEEeecCC
Q 011435 206 VID-------------RGNAALRQISLNQDDCEYQYNSISPTDILMVVGAVL-VGYVTCMLQQGFGPFFFSRTQQ 266 (486)
Q Consensus 206 VaD-------------~gn~rIr~id~~G~~~~~~~~~~~~~~i~t~~g~~~-~Gy~l~l~~~~~g~~~~a~~~~ 266 (486)
|+- ...++|.||+++|..- ...-+.. ..+.+.++ ..+.+++.. .|.+++++...
T Consensus 155 vt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip---~~nPf~~--~~i~a~G~RNp~Gla~dp--~G~L~~~d~g~ 222 (347)
T 3das_A 155 AGTGESGDTGLSQDRKSLGGKILRMTPDGEPA---PGNPFPG--SPVYSYGHRNVQGLAWDD--KQRLFASEFGQ 222 (347)
T ss_dssp EECBCTTCGGGTTCTTCSTTCEEEECTTSSBC---TTCSSTT--CCEEEBCCSBCCEEEECT--TCCEEEEECCS
T ss_pred EEECCCCCCccccCCCCCCCEEEEEeCCCCcc---CCCCCCC--CeEEeeCCCCcceEEECC--CCCEEEEecCC
Confidence 994 2358999999998521 1111111 12333333 356777754 58888888643
No 67
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.69 E-value=9.5e-07 Score=86.40 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=87.5
Q ss_pred ceeEEEccCCeEEEEECC-CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEV-NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~-n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
..++.+.+||+++|++.. +++|+.++++|...... -.+. + ....+..|.+++++++|+++|++..+
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~--~~~~--~---------~~~~~~~~~~v~~~~~G~~lv~~~~~ 145 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKT--EFET--G---------IERPHAQFRQINKNKKGNYLVPLFAT 145 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEE--EECC--S---------CSSGGGSCSCCEECTTSCEEEEETTT
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEE--eccC--C---------CCcccccccCceECCCCCEEEEecCC
Confidence 467788899999999998 88999999986532111 1110 0 01234568899999999999999999
Q ss_pred CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC-CC
Q 011435 156 LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN-QD 222 (486)
Q Consensus 156 ~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~-G~ 222 (486)
++|..+|++| +-++... ..|.+++ ...+|+++|++..+++|..++++ |+
T Consensus 146 ~~v~~~d~~G~~~w~~~~~-----------------~~~~~~~-~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 146 SEVREIAPNGQLLNSVKLS-----------------GTPFSSA-FLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp TEEEEECTTSCEEEEEECS-----------------SCCCEEE-ECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred CEEEEECCCCCEEEEEECC-----------------CCcccee-EcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 9999999999 4444321 2466776 67889999999999999999999 65
No 68
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.68 E-value=2.5e-07 Score=97.76 Aligned_cols=179 Identities=12% Similarity=0.112 Sum_probs=107.5
Q ss_pred ccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCc
Q 011435 58 FENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHP 137 (486)
Q Consensus 58 ~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P 137 (486)
...++.+++++++ +..|.+|++++||+|||++...++|++++.+. +....++........ ......+
T Consensus 13 ~~~gf~~~~~a~~---l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~---g~~~~~~~~~~~~~~-------~~g~~Gl 79 (454)
T 1cru_A 13 KSENFDKKVILSN---LNKPHALLWGPDNQIWLTERATGKILRVNPES---GSVKTVFQVPEIVND-------ADGQNGL 79 (454)
T ss_dssp CCTTSCEEEEECC---CSSEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCCC-------TTSSCSE
T ss_pred CCCCeEEEEEECC---CCCceEEEEcCCCcEEEEEcCCCEEEEEECCC---CcEeEEecCCccccc-------cCCCCce
Confidence 3457778888865 45799999999999999999878999998642 223444432110000 0012357
Q ss_pred ceEEEcC----CCCEEEEeCC------------CCEEEEEcCCC----c---eEEcCCCCCCCCcCCCCccccccCCCce
Q 011435 138 KGVTMDD----KGNLYVADTL------------NLAIRKIGDAG----V---TTIAGGKSNVAGFRDGPSEDAKFSNDFD 194 (486)
Q Consensus 138 ~GIavD~----dG~LYVAD~~------------n~rIrkid~~G----v---~tiaGg~~g~~G~~DG~~~~a~f~~P~g 194 (486)
.|||+++ +|.|||+++. .++|.+++.++ + .++..... . ...-.+.+
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p---------~--~~~H~~~~ 148 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLP---------S--SKDHQSGR 148 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEEC---------C--CSSCCEEE
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCC---------C--CCCCCCCe
Confidence 7999999 6789999964 46898886432 1 22221100 0 11234678
Q ss_pred eEEEcCCCeEEEEeC--C------------------------------CCeEEEEECCCCceeecccCCCCcc-eEEEEe
Q 011435 195 VVYVRPTCSLLVIDR--G------------------------------NAALRQISLNQDDCEYQYNSISPTD-ILMVVG 241 (486)
Q Consensus 195 Ia~vd~~G~LYVaD~--g------------------------------n~rIr~id~~G~~~~~~~~~~~~~~-i~t~~g 241 (486)
|+ ++++|.|||+-- + .++|.||+++|..- ...-+..+ ...+.+
T Consensus 149 l~-f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip---~~Npf~~~~~~ei~a 224 (454)
T 1cru_A 149 LV-IGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP---KDNPSFNGVVSHIYT 224 (454)
T ss_dssp EE-ECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC---TTCCEETTEECSEEE
T ss_pred Ee-ECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCC---CCCCCCCCCcceEEE
Confidence 87 789999999842 1 36899999987411 00000000 011222
Q ss_pred eee-ecceEeeeccCCcceEEeecCC
Q 011435 242 AVL-VGYVTCMLQQGFGPFFFSRTQQ 266 (486)
Q Consensus 242 ~~~-~Gy~l~l~~~~~g~~~~a~~~~ 266 (486)
.++ ..+.+|+.. .|.+++++...
T Consensus 225 ~G~RNp~gla~dp--~G~L~~~d~g~ 248 (454)
T 1cru_A 225 LGHRNPQGLAFTP--NGKLLQSEQGP 248 (454)
T ss_dssp BCCSEEEEEEECT--TSCEEEEEECS
T ss_pred ECCCCcceEEECC--CCCEEEEecCC
Confidence 222 346666654 58888887643
No 69
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.65 E-value=4.1e-07 Score=89.03 Aligned_cols=117 Identities=13% Similarity=0.080 Sum_probs=89.5
Q ss_pred ccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 75 VVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
..|.+++++++|+++|++..+++|+.++++|.. ... .+. -..|.+++++++|+++|++..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~---~w~-~~~----------------~~~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPNGQL---LNS-VKL----------------SGTPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTTSCE---EEE-EEC----------------SSCCCEEEECTTSCEEEECBT
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCCCCE---EEE-EEC----------------CCCccceeEcCCCCEEEEeCC
Confidence 357889999999999999999999999998542 111 121 025889999999999999999
Q ss_pred CCEEEEEcCC-C--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC----------CCeEEEEECCC
Q 011435 155 NLAIRKIGDA-G--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG----------NAALRQISLNQ 221 (486)
Q Consensus 155 n~rIrkid~~-G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g----------n~rIr~id~~G 221 (486)
+++|..+|++ | +-.+.... . ...+|..|.+++ +.++|+|||++.. +.++..|+.+|
T Consensus 185 ~~~v~~~d~~tG~~~w~~~~~~--~--------~~~~l~~~~~~~-~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 185 AHCFVQLNLESNRIVRRVNAND--I--------EGVQLFFVAQLF-PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp TSEEEEECTTTCCEEEEEEGGG--S--------BSCCCSEEEEEE-ECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred CCeEEEEeCcCCcEEEEecCCC--C--------CCccccccccce-EcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 9999999998 7 45554210 0 112477788887 7889999999962 45799999988
Q ss_pred C
Q 011435 222 D 222 (486)
Q Consensus 222 ~ 222 (486)
+
T Consensus 254 ~ 254 (276)
T 3no2_A 254 K 254 (276)
T ss_dssp B
T ss_pred C
Confidence 6
No 70
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.64 E-value=2.8e-07 Score=94.00 Aligned_cols=134 Identities=10% Similarity=0.068 Sum_probs=88.5
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEE---cCCCCEEE
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTM---DDKGNLYV 150 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIav---D~dG~LYV 150 (486)
.+|+++++|. +|.+||+|..+++|.++++++.. ...+ ...+... +| ....+|.||.+ |++|.|||
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~---~~~~--~~~~~s~--~g----~~~~~~sGl~~~~~D~~grL~v 81 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS---HFNV--VIDGASS--NG----DGEQQMSGLSLLTHDNSKRLFA 81 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCC---EEEE--CCTTTCC--SS----CCSEEEEEEEESSSSSCCEEEE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe---EEEE--ecCCccc--cC----CCcceeeEEEEeccCCCCcEEE
Confidence 3699999986 78899999999999999997432 1222 2222110 01 12336789999 78988888
Q ss_pred -EeC------------CCCEEEEEcCC----C-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC-
Q 011435 151 -ADT------------LNLAIRKIGDA----G-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN- 211 (486)
Q Consensus 151 -AD~------------~n~rIrkid~~----G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn- 211 (486)
+|. +.+.|.++|.+ + ....+.-.....++. ......+..+++++ +|.+|++||+|+..
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~--~~~g~~~~~~nDva-vD~~GnaYVt~s~~~ 158 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE--KKAGKRPFGVVQSA-QDRDGNSYVAFALGM 158 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH--HHHSSCCEEEEEEE-ECTTSCEEEEEEESS
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccc--ccccccccCCceeE-ECCCCCEEEeCCCCC
Confidence 663 35789999977 5 332222100000000 00001234588998 89999999999999
Q ss_pred CeEEEEECCCC
Q 011435 212 AALRQISLNQD 222 (486)
Q Consensus 212 ~rIr~id~~G~ 222 (486)
+.|.+|+++|.
T Consensus 159 ~~I~rV~pdG~ 169 (334)
T 2p9w_A 159 PAIARVSADGK 169 (334)
T ss_dssp CEEEEECTTSC
T ss_pred CeEEEEeCCCC
Confidence 99999999997
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.59 E-value=5.9e-06 Score=79.94 Aligned_cols=137 Identities=15% Similarity=0.170 Sum_probs=88.7
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCcccccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARF 134 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~L 134 (486)
++...+..+.++..+. .|.+++++++|+ ||+++..++.|.+++..+.. ....+... .+ ........
T Consensus 74 ~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~----~~---~~~~~~~~ 140 (353)
T 3vgz_A 74 LDPVTLEVTQAIHNDL----KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE--VKGRLVLD----DR---KRTEEVRP 140 (353)
T ss_dssp ECTTTCCEEEEEEESS----CCCSEEEETTTTEEEEEETTTTEEEEEETTTCC--EEEEEESC----CC---CCCSSCCC
T ss_pred EcCCCCeEEEEEecCC----CcceEEECCCCCEEEEEecCCCEEEEEeCCCCe--eEEEEecC----CC---ccccccCC
Confidence 3444555555554433 489999999998 99999998999999987532 11122110 00 00001122
Q ss_pred CCcceEEEcCCCC-EEEEeC-CCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC
Q 011435 135 NHPKGVTMDDKGN-LYVADT-LNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR 209 (486)
Q Consensus 135 n~P~GIavD~dG~-LYVAD~-~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~ 209 (486)
.+|.+++++++|+ |||++. .+++|+++|... +..+... -..|.++++......||+++.
T Consensus 141 ~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 141 LQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT----------------GKMSTGLALDSEGKRLYTTNA 204 (353)
T ss_dssp CEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC----------------CTTCCCCEEETTTTEEEEECT
T ss_pred CCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC----------------CCccceEEECCCCCEEEEEcC
Confidence 3588999999988 999994 478899999865 3333211 123678875444456888876
Q ss_pred CCCeEEEEECCCC
Q 011435 210 GNAALRQISLNQD 222 (486)
Q Consensus 210 gn~rIr~id~~G~ 222 (486)
++.|..++....
T Consensus 205 -~~~i~~~d~~~~ 216 (353)
T 3vgz_A 205 -DGELITIDTADN 216 (353)
T ss_dssp -TSEEEEEETTTT
T ss_pred -CCeEEEEECCCC
Confidence 678999998753
No 72
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.56 E-value=1.3e-06 Score=86.73 Aligned_cols=107 Identities=17% Similarity=0.216 Sum_probs=74.9
Q ss_pred cceeEEEccCCe-EEEEECCCCEEEEEcCC--CC-cccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEE
Q 011435 76 VPYKIRVSEDGE-LFAVDEVNSNIVKITPP--LS-QYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVA 151 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~~n~rI~kid~~--g~-~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA 151 (486)
.|.++++++||+ ||++|..+++|++++.+ +. ......++... .. ....|.||++|++|+|||+
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~-~~------------~~~~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS-TG------------IKGGMDGSVCDAEGHIWNA 246 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC-TT------------SSSEEEEEEECTTSCEEEE
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEEC-CC------------CCCCCCeeEECCCCCEEEE
Confidence 589999999996 99999999999999864 22 11111222211 00 1125899999999999999
Q ss_pred eCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEE-cCCCeEEEEeCCC
Q 011435 152 DTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYV-RPTCSLLVIDRGN 211 (486)
Q Consensus 152 D~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~v-d~~G~LYVaD~gn 211 (486)
+..+++|.+++++| +..+... ...|.++++. +..+.|||+....
T Consensus 247 ~~~~~~v~~~d~~g~~~~~i~~~----------------~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 247 RWGEGAVDRYDTDGNHIARYEVP----------------GKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EETTTEEEEECTTCCEEEEEECS----------------CSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EeCCCEEEEECCCCCEEEEEECC----------------CCCcEEEEEecCCCCEEEEEecCC
Confidence 98889999999988 3444321 1246788765 3446899998665
No 73
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.49 E-value=1.5e-05 Score=77.00 Aligned_cols=113 Identities=11% Similarity=0.234 Sum_probs=79.9
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEe
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 152 (486)
..|.++++++||+ ||+++. ++.|.++|..... ....... +..+ .-..|.+|+++++|+ ||+++
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~---~~~~~~~--~~~~---------~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNA-DGELITIDTADNK---ILSRKKL--LDDG---------KEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TTCCCCEEETTTTEEEEECT-TSEEEEEETTTTE---EEEEEEC--CCSS---------SCCCEEEEEEETTTTEEEEEE
T ss_pred CccceEEECCCCCEEEEEcC-CCeEEEEECCCCe---EEEEEEc--CCCC---------CCcccceEEECCCCCEEEEEe
Confidence 4589999999987 888876 6799999986432 1111110 0001 123578999999998 99999
Q ss_pred CCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEEEEECCC
Q 011435 153 TLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 153 ~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr~id~~G 221 (486)
..++.|.++|... +..+.. ..|.++++ +++| .|||++..++.|..++...
T Consensus 250 ~~~~~v~~~d~~~~~~~~~~~~------------------~~~~~~~~-s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAKVAA------------------PESLAVLF-NPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp SSSSEEEEEETTTCCEEEEEEC------------------SSCCCEEE-ETTTTEEEEEETTTTEEEEEETTT
T ss_pred CCCCEEEEEECCCCcEEEEEEc------------------CCCceEEE-CCCCCEEEEEECCCCeEEEEECCC
Confidence 9889999999755 333321 12456775 4555 5999999999999999874
No 74
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.48 E-value=4.9e-06 Score=82.26 Aligned_cols=131 Identities=10% Similarity=0.056 Sum_probs=90.5
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccC-CccccCCCCcccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQ-GYTGHVDGKPNEA 132 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~-G~~G~~dG~~~~a 132 (486)
.+++...|.++.++.-+.. .++.|++++ ++.||+++..+++|.++|.++. +++. ++. + .+
T Consensus 47 ~~iD~~tg~v~~~i~l~~~--~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~-----~v~~-~i~~g-~~--------- 107 (266)
T 2iwa_A 47 RQVALQTGKVENIHKMDDS--YFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTL-----SNIK-NFTHQ-MK--------- 107 (266)
T ss_dssp EEEETTTCCEEEEEECCTT--CCEEEEEEE-TTEEEEEETTCSEEEEEETTTT-----EEEE-EEECC-SS---------
T ss_pred EEEECCCCCEEEEEecCCC--cceEEEEEe-CCEEEEEEecCCEEEEEECCCC-----cEEE-EEECC-CC---------
Confidence 4478888888887764432 346788887 4589999999999999998742 2221 110 1 01
Q ss_pred ccCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC
Q 011435 133 RFNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR 209 (486)
Q Consensus 133 ~Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~ 209 (486)
.+.||+.| .+.|||+| +.++|.+||+.. +.++.-+.. ...+..|+++.++ +|.||++..
T Consensus 108 ---~g~glt~D-g~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~-----------~~p~~~~nele~~--dg~lyvn~~ 169 (266)
T 2iwa_A 108 ---DGWGLATD-GKILYGSD-GTSILYEIDPHTFKLIKKHNVKYN-----------GHRVIRLNELEYI--NGEVWANIW 169 (266)
T ss_dssp ---SCCEEEEC-SSSEEEEC-SSSEEEEECTTTCCEEEEEECEET-----------TEECCCEEEEEEE--TTEEEEEET
T ss_pred ---CeEEEEEC-CCEEEEEC-CCCeEEEEECCCCcEEEEEEECCC-----------CcccccceeEEEE--CCEEEEecC
Confidence 23455554 23599999 688999999987 344433210 0234568898866 689999999
Q ss_pred CCCeEEEEECCC
Q 011435 210 GNAALRQISLNQ 221 (486)
Q Consensus 210 gn~rIr~id~~G 221 (486)
..+.|.+||+..
T Consensus 170 ~~~~V~vID~~t 181 (266)
T 2iwa_A 170 QTDCIARISAKD 181 (266)
T ss_dssp TSSEEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 999999999974
No 75
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.48 E-value=1.1e-05 Score=78.95 Aligned_cols=124 Identities=16% Similarity=0.182 Sum_probs=80.6
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEe
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 152 (486)
..|.++++++||+ ||+++..++.|..++.+... +....+... ..... + ......|.+|+++++|+ |||++
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~-~~~~~---~---~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT-GAFTQLGIV-KTIPA---D---YTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT-TEEEEEEEE-ESSCT---T---CCSCCEEEEEEECTTSCEEEEEE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC-CceEEeeee-eecCC---C---CCCCCcceeEEECCCCCEEEEEe
Confidence 3688999999998 99999988998887765211 122111110 00000 0 01124689999999998 89999
Q ss_pred CCCCEEEEEcCC--C-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEEEEECC
Q 011435 153 TLNLAIRKIGDA--G-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALRQISLN 220 (486)
Q Consensus 153 ~~n~rIrkid~~--G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr~id~~ 220 (486)
..++.|.+++.+ | +..+.... ..-..|.+++ ++++| .|||++..++.|..++.+
T Consensus 259 ~~~~~v~v~~~~~~g~~~~~~~~~-------------~~~~~~~~~~-~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 259 RGYNTLAVFAVTADGHLTLIQQIS-------------TEGDFPRDFD-LDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp ETTTEEEEEEECGGGCEEEEEEEE-------------CSSSCCCEEE-ECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEECCCCcEEEeEEEe-------------cCCCCcCeEE-ECCCCCEEEEEEcCCCcEEEEEEe
Confidence 988998888754 3 22221100 0012478898 56666 599999999999888655
No 76
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.45 E-value=2.4e-06 Score=83.64 Aligned_cols=125 Identities=19% Similarity=0.198 Sum_probs=83.0
Q ss_pred ccceeEEEccCCeEEEEECC--CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 75 VVPYKIRVSEDGELFAVDEV--NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~--n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
..|.+|++++||+||+++.. ++.|+.++.++.. .+.+... ......|.+|+++++|+ ||++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~---~~~~~~~-------------~~~~~~p~~~a~spdg~~l~~~ 103 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQT---AHKLNTV-------------VAPGTPPAYVAVDEARQLVYSA 103 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTE---EEEEEEE-------------EEESCCCSEEEEETTTTEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCc---EEEeeee-------------ecCCCCCEEEEECCCCCEEEEE
Confidence 46999999999999999864 5788888875322 2222110 00123799999999998 9999
Q ss_pred eCCCCEEEEEcC--CC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 152 DTLNLAIRKIGD--AG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 152 D~~n~rIrkid~--~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
+..++.|..++. +| +..+..... .+ .++........|.+++ ++++|+||+++.++++|+.++.+
T Consensus 104 ~~~~~~v~v~~~~~~g~~~~~~~~~~--~~--~~p~~~~~~~~~~~~~-~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 104 NYHKGTAEVMKIAADGALTLTDTVQH--SG--HGPRPEQDGSHIHYTD-LTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEEC--CC--CCSSTTCSSCCEEEEE-ECTTSCEEEEETTTTEEEEEEEC
T ss_pred eCCCCEEEEEEeCCCCCeeecceeec--CC--CCCCccccCCCceEEE-ECCCCcEEEEeCCCCEEEEEEEC
Confidence 988888888774 34 322211000 00 0111111234577787 67888899999999999999987
No 77
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.44 E-value=3.9e-06 Score=85.99 Aligned_cols=125 Identities=17% Similarity=0.152 Sum_probs=78.9
Q ss_pred ccceeEEEcc----CCeEEEEEC--CCCEEEEEcCCCC-----cccccEEEecccCCccccCCCCccccccCCcceEEEc
Q 011435 75 VVPYKIRVSE----DGELFAVDE--VNSNIVKITPPLS-----QYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMD 143 (486)
Q Consensus 75 ~~P~GlAVd~----dG~LYVaD~--~n~rI~kid~~g~-----~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD 143 (486)
..|.|||+++ +|.|||+.+ ..++|.|+..++. ......++.-.... ........|+++
T Consensus 80 ~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~-----------~~~H~g~~l~fg 148 (347)
T 3das_A 80 GGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK-----------GVIHNGGRIAFG 148 (347)
T ss_dssp BSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC-----------CSSCCCCCEEEC
T ss_pred CCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC-----------CCCccCccccCC
Confidence 3589999998 488999764 5679999987641 11223333321111 112356789999
Q ss_pred CCCCEEEEeC-------------CCCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC
Q 011435 144 DKGNLYVADT-------------LNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR 209 (486)
Q Consensus 144 ~dG~LYVAD~-------------~n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~ 209 (486)
++|.|||+-. ..++|+||+++| +. .++ -|.+...-..-+.+|.+++ .+++|.||++|.
T Consensus 149 pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip--~~n-----Pf~~~~i~a~G~RNp~Gla-~dp~G~L~~~d~ 220 (347)
T 3das_A 149 PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA--PGN-----PFPGSPVYSYGHRNVQGLA-WDDKQRLFASEF 220 (347)
T ss_dssp TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC--TTC-----SSTTCCEEEBCCSBCCEEE-ECTTCCEEEEEC
T ss_pred CCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc--CCC-----CCCCCeEEeeCCCCcceEE-ECCCCCEEEEec
Confidence 9999999942 357899999987 21 000 0100000111267899998 677999999998
Q ss_pred CCC---eEEEEE
Q 011435 210 GNA---ALRQIS 218 (486)
Q Consensus 210 gn~---rIr~id 218 (486)
+.. .|.++.
T Consensus 221 g~~~~deln~i~ 232 (347)
T 3das_A 221 GQDTWDELNAIK 232 (347)
T ss_dssp CSSSCEEEEEEC
T ss_pred CCCCCceeeEEc
Confidence 764 455554
No 78
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.43 E-value=2.8e-06 Score=86.23 Aligned_cols=139 Identities=13% Similarity=0.089 Sum_probs=83.0
Q ss_pred ccceeEEEccCCeEEEEECC-------------CCEEEEEcCCCCcccccEEEecccCCcccc--CCCCccccccCCcce
Q 011435 75 VVPYKIRVSEDGELFAVDEV-------------NSNIVKITPPLSQYSRGRLVAGSFQGYTGH--VDGKPNEARFNHPKG 139 (486)
Q Consensus 75 ~~P~GlAVd~dG~LYVaD~~-------------n~rI~kid~~g~~~~~~~~vaG~~~G~~G~--~dG~~~~a~Ln~P~G 139 (486)
.+|.+|++++||.|||+... .++|+||+++|+. ..++. ..+. .........+.+|.|
T Consensus 130 h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~------p~~np--f~~~~~~~~~i~a~G~rnp~g 201 (353)
T 2g8s_A 130 HFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI------PDDNP--FIKESGVRAEIWSYGIRNPQG 201 (353)
T ss_dssp CCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC------CTTCT--TTTSTTSCTTEEEECCSEEEE
T ss_pred ccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC------CCCCC--CcCCCCCCccEEEEcCcCccc
Confidence 45889999999999999643 3589999998642 11110 0000 000112234788999
Q ss_pred EEEcC-CCCEEEEeCCCC---EEEEEcCCCce---EEcCCCC--C----------CCCcCCCCccccccCCCceeEEEcC
Q 011435 140 VTMDD-KGNLYVADTLNL---AIRKIGDAGVT---TIAGGKS--N----------VAGFRDGPSEDAKFSNDFDVVYVRP 200 (486)
Q Consensus 140 IavD~-dG~LYVAD~~n~---rIrkid~~Gv~---tiaGg~~--g----------~~G~~DG~~~~a~f~~P~gIa~vd~ 200 (486)
|++|+ +|.||++|.+.+ .|.++...+-. .+.++.. + ..++..-...-.....|.|+++...
T Consensus 202 l~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g 281 (353)
T 2g8s_A 202 MAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNS 281 (353)
T ss_dssp EEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECC
T ss_pred eEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECC
Confidence 99999 899999998753 56555543310 0011000 0 0000000000001236888886432
Q ss_pred ------CCeEEEEeCCCCeEEEEECCC
Q 011435 201 ------TCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 201 ------~G~LYVaD~gn~rIr~id~~G 221 (486)
+|.|||+|..+++|+++++++
T Consensus 282 ~~fp~~~g~l~v~~~~~~~v~~~~~~~ 308 (353)
T 2g8s_A 282 DKFPQWQQKLFIGALKDKDVIVMSVNG 308 (353)
T ss_dssp SSSGGGTTEEEEEETTTTEEEEEEEET
T ss_pred ccCcccCCcEEEEEccCCEEEEEEeCC
Confidence 589999999999999999875
No 79
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.40 E-value=3.3e-06 Score=83.49 Aligned_cols=145 Identities=12% Similarity=0.058 Sum_probs=95.0
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCcccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEA 132 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a 132 (486)
.+++...+.++.++..| .|.|+.+.+||. ||++| +.++|.+||+.+... ..++.+|. .| .
T Consensus 89 ~viD~~t~~v~~~i~~g-----~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v-~~~I~Vg~----~~--------~ 149 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQ-----MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKL-IKKHNVKY----NG--------H 149 (266)
T ss_dssp EEEETTTTEEEEEEECC-----SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCE-EEEEECEE----TT--------E
T ss_pred EEEECCCCcEEEEEECC-----CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcE-EEEEEECC----CC--------c
Confidence 44666667777776554 255666666665 99999 678999999976431 11222331 01 1
Q ss_pred ccCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC
Q 011435 133 RFNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR 209 (486)
Q Consensus 133 ~Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~ 209 (486)
.+..|+++.+. +|.||++....+.|.+||+.. +.+|.-++........ .......|+||++....+.|||+..
T Consensus 150 p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~---~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 150 RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDE---GFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHT---TCTTCCCEEEEEEETTTTEEEEEET
T ss_pred ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccc---cccccCceEEEEEcCCCCEEEEECC
Confidence 35578999988 789999999999999999865 3444321000000000 0112356899997666679999999
Q ss_pred CCCeEEEEECCC
Q 011435 210 GNAALRQISLNQ 221 (486)
Q Consensus 210 gn~rIr~id~~G 221 (486)
...+|.+|++..
T Consensus 226 ~~~~v~~i~l~~ 237 (266)
T 2iwa_A 226 LWPKLFEIKLHL 237 (266)
T ss_dssp TCSEEEEEEEEE
T ss_pred CCCeEEEEEEec
Confidence 999999999864
No 80
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.30 E-value=1.6e-05 Score=76.61 Aligned_cols=127 Identities=13% Similarity=0.210 Sum_probs=87.2
Q ss_pred EEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccc
Q 011435 55 VLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEAR 133 (486)
Q Consensus 55 vv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~ 133 (486)
+++...+.....+..+ ...| ++++++||+ ||+++...+.|++++..+... ....+..
T Consensus 24 ~~d~~~~~~~~~~~~~---~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~----------------- 81 (331)
T 3u4y_A 24 FFSTDTLEILNQITLG---YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQE----------------- 81 (331)
T ss_dssp EEETTTCCEEEEEECC---CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEE-----------------
T ss_pred EEeCcccceeeeEEcc---CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEeccc-----------------
Confidence 3566677776666543 2246 999999997 999999889999999875431 0111111
Q ss_pred cCCcce-EEEcCCCC-EEEEeCCCC--EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEE
Q 011435 134 FNHPKG-VTMDDKGN-LYVADTLNL--AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLL 205 (486)
Q Consensus 134 Ln~P~G-IavD~dG~-LYVAD~~n~--rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LY 205 (486)
-..|.. ++++++|+ ||+++..++ .|+++|.+. +.++..+ ..|.+++ ++++| .||
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-----------------~~~~~~~-~spdg~~l~ 143 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-----------------YDAVGIA-ISPNGNGLI 143 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-----------------TTEEEEE-ECTTSSCEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-----------------CCccceE-ECCCCCEEE
Confidence 125777 99999998 665544435 999999765 3333221 2367887 56777 599
Q ss_pred EEeCCCCe-EEEEECCC
Q 011435 206 VIDRGNAA-LRQISLNQ 221 (486)
Q Consensus 206 VaD~gn~r-Ir~id~~G 221 (486)
+++..++. |..++.+.
T Consensus 144 ~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 144 LIDRSSANTVRRFKIDA 160 (331)
T ss_dssp EEEETTTTEEEEEEECT
T ss_pred EEecCCCceEEEEEECC
Confidence 99998777 88887764
No 81
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.30 E-value=2e-05 Score=77.69 Aligned_cols=118 Identities=13% Similarity=0.216 Sum_probs=79.5
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEe
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVAD 152 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 152 (486)
..|.++++++||+ ||+++..++.|.+++.++. ....+... .. ....+..|.+|+++++|+ |||++
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g---~~~~~~~~-~~---------~~~~~~~~~~i~~spdg~~l~v~~ 277 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG---MLDEIQTV-AA---------DTVNAQGSGDIHLSPDGKYLYASN 277 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETT---EEEEEEEE-ES---------CSSCCCCEEEEEECTTSSEEEEEE
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC---ceEEeEEE-ec---------CCCCCCCcccEEECCCCCEEEEEC
Confidence 4689999999997 9999988889999987532 22211110 00 011245688999999998 89999
Q ss_pred CC-CCEEEEEcCC---C-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEEEEECC
Q 011435 153 TL-NLAIRKIGDA---G-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALRQISLN 220 (486)
Q Consensus 153 ~~-n~rIrkid~~---G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr~id~~ 220 (486)
.. .+.|..++.+ | +..+.... . -..|.+++ ++++| .||+++..++.|..+..+
T Consensus 278 ~~~~~~i~v~~~~~~~g~~~~~~~~~-------------~-g~~~~~~~-~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 278 RLKADGVAIFKVDETNGTLTKVGYQL-------------T-GIHPRNFI-ITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CSSSCEEEEEEECTTTCCEEEEEEEE-------------C-SSCCCEEE-ECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEEEcCCCCcEEEeeEec-------------C-CCCCceEE-ECCCCCEEEEEECCCCCEEEEEEE
Confidence 88 7888876543 4 32221110 0 02578888 56666 599999888888886554
No 82
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.26 E-value=6.2e-06 Score=86.99 Aligned_cols=118 Identities=9% Similarity=0.079 Sum_probs=74.1
Q ss_pred cceeEEEcc----CCeEEEEECC------------CCEEEEEcCCCC--cccccEEEecccCCccccCCCCccccccCCc
Q 011435 76 VPYKIRVSE----DGELFAVDEV------------NSNIVKITPPLS--QYSRGRLVAGSFQGYTGHVDGKPNEARFNHP 137 (486)
Q Consensus 76 ~P~GlAVd~----dG~LYVaD~~------------n~rI~kid~~g~--~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P 137 (486)
.+.|||+++ +|.|||+++. .++|++++.+.. .....+++...... .....+
T Consensus 78 Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-----------~~~H~~ 146 (454)
T 1cru_A 78 GLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-----------SKDHQS 146 (454)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-----------CSSCCE
T ss_pred ceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-----------CCCCCC
Confidence 356999998 7889999964 468999976432 11122333321111 123468
Q ss_pred ceEEEcCCCCEEEEeCC--------------------------------CCEEEEEcCCC-c---eEEcCCCCCCCCcCC
Q 011435 138 KGVTMDDKGNLYVADTL--------------------------------NLAIRKIGDAG-V---TTIAGGKSNVAGFRD 181 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~--------------------------------n~rIrkid~~G-v---~tiaGg~~g~~G~~D 181 (486)
.+|++++||+|||+-.. .++|.||+++| + ..+.++. ...-|.
T Consensus 147 ~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~-~~ei~a- 224 (454)
T 1cru_A 147 GRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGV-VSHIYT- 224 (454)
T ss_dssp EEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTE-ECSEEE-
T ss_pred CeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCC-cceEEE-
Confidence 99999999999999432 36899999988 2 1111100 000111
Q ss_pred CCccccccCCCceeEEEcCCCeEEEEeCCCC
Q 011435 182 GPSEDAKFSNDFDVVYVRPTCSLLVIDRGNA 212 (486)
Q Consensus 182 G~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~ 212 (486)
.-+.+|.+++ .+++|.||++|.+..
T Consensus 225 -----~G~RNp~gla-~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 225 -----LGHRNPQGLA-FTPNGKLLQSEQGPN 249 (454)
T ss_dssp -----BCCSEEEEEE-ECTTSCEEEEEECSS
T ss_pred -----ECCCCcceEE-ECCCCCEEEEecCCC
Confidence 1256899998 577899999997754
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.24 E-value=4.3e-05 Score=73.63 Aligned_cols=125 Identities=12% Similarity=0.207 Sum_probs=83.8
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcc-cccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQY-SRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~-~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
..|.++++++||+ ||+++..++.|.+++...... .....+.. -..|.+|+++++|+ |||+
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-----------------~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-----------------NNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-----------------SSCCCCEEECTTSSEEEEE
T ss_pred CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-----------------CCCCceEEECCCCCEEEEE
Confidence 4599999999997 999999999999999864321 00111211 13689999999999 9999
Q ss_pred eCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 152 DTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 152 D~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+...+.|.++|... +..+........ .+. ......+++++..+...|||+...++.|..++..+.
T Consensus 239 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 239 TESTVDVFNFNQLSGTLSFVKSFGHGLL--IDP----RPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECCCC--CCC----GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EcCCCEEEEEECCCCceeeecccccccc--cCC----CCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 98888999999764 322211000000 000 111122557754444469999999999999999875
No 84
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.23 E-value=2.2e-05 Score=77.29 Aligned_cols=121 Identities=17% Similarity=0.210 Sum_probs=78.5
Q ss_pred ceeEEEccCCe-EEEEECCCCEEEEEcCCCCccc----c-cEEE--ecccCCccccCCCCccccccCCcceEEEcCCCC-
Q 011435 77 PYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYS----R-GRLV--AGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN- 147 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~----~-~~~v--aG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~- 147 (486)
|+++++++||+ ||+++...+.|..++.+... + . .... ..... ...-..|.+++++++|+
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~-~~~~~~~l~~~~~~~~~~-----------~~~~~~~~~~~~spdg~~ 224 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNA-NADNKEKFLTKGTPEAFK-----------VAPGSGPRHLIFNSDGKF 224 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTC-CTTTCCCCEEEEEEEEEE-----------CCTTCCEEEEEECTTSSE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC-Ccccccceeeccccccee-----------cCCCCCCeEEEEcCCCCE
Confidence 47799999997 99999988888877654221 1 1 1110 00000 00123688999999998
Q ss_pred EEEEeCCCCEEEEEcCC-C-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCC-CCeEEEEECC
Q 011435 148 LYVADTLNLAIRKIGDA-G-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRG-NAALRQISLN 220 (486)
Q Consensus 148 LYVAD~~n~rIrkid~~-G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~g-n~rIr~id~~ 220 (486)
|||++..++.|.+++.+ | +..+..... ....+..|.+++ ++++| .||+++.+ +++|..++.+
T Consensus 225 l~v~~~~~~~v~v~~~~~g~~~~~~~~~~----------~~~~~~~~~~i~-~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 225 AYLINEIGGTVIAFRYADGMLDEIQTVAA----------DTVNAQGSGDIH-LSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEETTTCEEEEEEEETTEEEEEEEEES----------CSSCCCCEEEEE-ECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEEEcCCCCeEEEEEecCCceEEeEEEec----------CCCCCCCcccEE-ECCCCCEEEEECCCCCCEEEEEEEc
Confidence 99999888999988854 3 322211000 011234577887 56666 59999999 8899998875
No 85
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.19 E-value=0.00018 Score=68.79 Aligned_cols=121 Identities=11% Similarity=0.096 Sum_probs=78.8
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEE--EecccCCccccCCCCccccccCCcceEEEcCCCC-EEE
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRL--VAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYV 150 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~--vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYV 150 (486)
..|.+++++++|+ ||+++..++.|..++.+... +.... ...... .+ ......|.+|+++++|+ |||
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~--~~-------~~~~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH-GNIECVQTLDMMP--EN-------FSDTRWAADIHITPDGRHLYA 247 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT-SCCEEEEEEECSC--TT-------CCSCCCEEEEEECTTSSEEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC-CcEEEEeeccccC--cc-------ccccCCccceEECCCCCEEEE
Confidence 4688999999998 89999888999999875311 11211 111100 00 11234678999999997 899
Q ss_pred EeCCCCEEEEEcCC--C--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEEEEECC
Q 011435 151 ADTLNLAIRKIGDA--G--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALRQISLN 220 (486)
Q Consensus 151 AD~~n~rIrkid~~--G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr~id~~ 220 (486)
++..++.|.+++.+ + ...+.... .-..|.+++ .+++| .||+++..++.|..++.+
T Consensus 248 ~~~~~~~i~v~d~~~~~~~~~~~~~~~--------------~~~~~~~~~-~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 248 CDRTASLITVFSVSEDGSVLSKEGFQP--------------TETQPRGFN-VDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EETTTTEEEEEEECTTSCCEEEEEEEE--------------CSSSCCCEE-ECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EecCCCEEEEEEEcCCCCceEEeeeec--------------CCCccceEE-ECCCCCEEEEecCCCCeEEEEEEc
Confidence 99888999998865 2 22221100 001277887 45666 599999888888888554
No 86
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.19 E-value=9.9e-06 Score=87.91 Aligned_cols=121 Identities=21% Similarity=0.207 Sum_probs=80.1
Q ss_pred CccceeEEEcc-CCeEEEEECCC---------------------CEEEEEcCCCCc------ccccEEEecccCCcc---
Q 011435 74 GVVPYKIRVSE-DGELFAVDEVN---------------------SNIVKITPPLSQ------YSRGRLVAGSFQGYT--- 122 (486)
Q Consensus 74 ~~~P~GlAVd~-dG~LYVaD~~n---------------------~rI~kid~~g~~------~~~~~~vaG~~~G~~--- 122 (486)
+..|+++++++ +|+|||+-+.| +.|+++..++.. ...+.+++|......
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 36899999997 78999986542 679999764321 012224445421110
Q ss_pred -ccCCCCccccccCCcceEEEcCCCCEEE-EeCC-----------CCEEEEEcCC-C-ceEEcCCCCCCCCcCCCCcccc
Q 011435 123 -GHVDGKPNEARFNHPKGVTMDDKGNLYV-ADTL-----------NLAIRKIGDA-G-VTTIAGGKSNVAGFRDGPSEDA 187 (486)
Q Consensus 123 -G~~dG~~~~a~Ln~P~GIavD~dG~LYV-AD~~-----------n~rIrkid~~-G-v~tiaGg~~g~~G~~DG~~~~a 187 (486)
+...+......|+.|++|++|++|+||| +|.. ++.|++++++ | +..++.+.
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P-------------- 528 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-------------- 528 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC--------------
T ss_pred ccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC--------------
Confidence 0001111245799999999999999999 7863 5689999985 5 77766421
Q ss_pred ccCCCceeEEEcCCCeEEEEe
Q 011435 188 KFSNDFDVVYVRPTCSLLVID 208 (486)
Q Consensus 188 ~f~~P~gIa~vd~~G~LYVaD 208 (486)
.+..|+|+++.++...|||+-
T Consensus 529 ~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 529 IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TTCEEEEEEECTTSSEEEEEE
T ss_pred CCccccCCEECCCCCEEEEEE
Confidence 134689999766666888875
No 87
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.18 E-value=0.0001 Score=72.35 Aligned_cols=151 Identities=15% Similarity=0.135 Sum_probs=90.4
Q ss_pred CcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcc-cccEEEe---cccCCcccc------------
Q 011435 61 GYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQY-SRGRLVA---GSFQGYTGH------------ 124 (486)
Q Consensus 61 G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~-~~~~~va---G~~~G~~G~------------ 124 (486)
|.+..++.-+. ...++||+++++|.+||++-.+++|++++.+.... .....+. +......|+
T Consensus 58 g~v~~~i~l~g--~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L 135 (255)
T 3qqz_A 58 GDLIRTIPLDF--VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTF 135 (255)
T ss_dssp CCEEEEEECSS--CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEE
T ss_pred CCEEEEEecCC--CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEE
Confidence 66666664221 24699999999999999998889988876432110 0001110 100000000
Q ss_pred -------------CCCC-----c---------cccccCCcceEEEcC-CCCEEEEeCCCCEEEEEcCCC-ceEEcCCCCC
Q 011435 125 -------------VDGK-----P---------NEARFNHPKGVTMDD-KGNLYVADTLNLAIRKIGDAG-VTTIAGGKSN 175 (486)
Q Consensus 125 -------------~dG~-----~---------~~a~Ln~P~GIavD~-dG~LYVAD~~n~rIrkid~~G-v~tiaGg~~g 175 (486)
.+|. . ....+..+.+|++|+ .|.|||....+++|..+|.+| +.....-..
T Consensus 136 ~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~- 214 (255)
T 3qqz_A 136 WFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTK- 214 (255)
T ss_dssp EEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECST-
T ss_pred EEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCC-
Confidence 0010 0 011244678999998 566888888888999999888 322211100
Q ss_pred CCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 176 VAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 176 ~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
|+ ......+..|.||+ +|++|+|||+...| .+++|...+
T Consensus 215 --g~---~~l~~~~~qpEGia-~d~~G~lyIvsE~n-~~y~f~~~~ 253 (255)
T 3qqz_A 215 --GS---RGLSHNIKQAEGVA-MDASGNIYIVSEPN-RFYRFTPQS 253 (255)
T ss_dssp --TG---GGCSSCCCSEEEEE-ECTTCCEEEEETTT-EEEEEEC--
T ss_pred --cc---CCcccccCCCCeeE-ECCCCCEEEEcCCc-eEEEEEecC
Confidence 11 01123477899998 79999999998885 999998764
No 88
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.14 E-value=8.5e-05 Score=72.52 Aligned_cols=132 Identities=18% Similarity=0.171 Sum_probs=89.6
Q ss_pred CcEEEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCcccc
Q 011435 53 GNVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEA 132 (486)
Q Consensus 53 gsvv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a 132 (486)
-.+++...|.+..++.-... .+..|++++ ++.||++++.+++|+++|.++. ..+ +++. ..+
T Consensus 45 v~~vD~~tgkv~~~~~l~~~--~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl-----~~~-~ti~-~~~--------- 105 (243)
T 3mbr_X 45 VRKVDLETGRILQRAEVPPP--YFGAGIVAW-RDRLIQLTWRNHEGFVYDLATL-----TPR-ARFR-YPG--------- 105 (243)
T ss_dssp EEEEETTTCCEEEEEECCTT--CCEEEEEEE-TTEEEEEESSSSEEEEEETTTT-----EEE-EEEE-CSS---------
T ss_pred EEEEECCCCCEEEEEeCCCC--cceeEEEEe-CCEEEEEEeeCCEEEEEECCcC-----cEE-EEEe-CCC---------
Confidence 34578888888887754333 235777876 4689999999999999998642 221 1110 001
Q ss_pred ccCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC
Q 011435 133 RFNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR 209 (486)
Q Consensus 133 ~Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~ 209 (486)
.+-||+.| .+.||++|. .++|+.+|+.. +.++.-+. ++ ..+...+.+.++ +|.||+...
T Consensus 106 ---~Gwglt~d-g~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~-------~g----~~~~~lNeLe~~--~G~lyanvw 167 (243)
T 3mbr_X 106 ---EGWALTSD-DSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTA-------GG----RPLDNLNELEWV--NGELLANVW 167 (243)
T ss_dssp ---CCCEEEEC-SSCEEEECS-SSEEEEECTTTCCEEEEEECEE-------TT----EECCCEEEEEEE--TTEEEEEET
T ss_pred ---CceEEeeC-CCEEEEECC-CCeEEEEeCCCCeEEEEEEEcc-------CC----cccccceeeEEe--CCEEEEEEC
Confidence 34677766 357999995 88999999987 34443221 01 124455677654 789999999
Q ss_pred CCCeEEEEECCC
Q 011435 210 GNAALRQISLNQ 221 (486)
Q Consensus 210 gn~rIr~id~~G 221 (486)
..+.|.+||+..
T Consensus 168 ~s~~I~vIDp~t 179 (243)
T 3mbr_X 168 LTSRIARIDPAS 179 (243)
T ss_dssp TTTEEEEECTTT
T ss_pred CCCeEEEEECCC
Confidence 999999999874
No 89
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.12 E-value=5.6e-05 Score=74.64 Aligned_cols=131 Identities=14% Similarity=0.108 Sum_probs=87.5
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEAR 133 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~ 133 (486)
.+++...|.++.++.-+.. .+..||+++. +.||+++..++++.++|+++.. ....+.- .+
T Consensus 68 ~~vD~~Tgkv~~~~~l~~~--~FgeGit~~g-~~ly~ltw~~~~v~v~D~~t~~--~~~ti~~-----~~---------- 127 (262)
T 3nol_A 68 RKVDIESGKTLQQIELGKR--YFGEGISDWK-DKIVGLTWKNGLGFVWNIRNLR--QVRSFNY-----DG---------- 127 (262)
T ss_dssp EEECTTTCCEEEEEECCTT--CCEEEEEEET-TEEEEEESSSSEEEEEETTTCC--EEEEEEC-----SS----------
T ss_pred EEEECCCCcEEEEEecCCc--cceeEEEEeC-CEEEEEEeeCCEEEEEECccCc--EEEEEEC-----CC----------
Confidence 3366667777766654332 2357788864 5899999999999999987432 1111110 00
Q ss_pred cCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC
Q 011435 134 FNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG 210 (486)
Q Consensus 134 Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g 210 (486)
.+.|++.| .+.||++|. .++|+++|+.. +.+|.-+. +| ..+..++.+.++ +|.||+....
T Consensus 128 --eG~glt~d-g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~-------~g----~~~~~lNELe~~--~G~lyan~w~ 190 (262)
T 3nol_A 128 --EGWGLTHN-DQYLIMSDG-TPVLRFLDPESLTPVRTITVTA-------HG----EELPELNELEWV--DGEIFANVWQ 190 (262)
T ss_dssp --CCCCEEEC-SSCEEECCS-SSEEEEECTTTCSEEEEEECEE-------TT----EECCCEEEEEEE--TTEEEEEETT
T ss_pred --CceEEecC-CCEEEEECC-CCeEEEEcCCCCeEEEEEEecc-------CC----ccccccceeEEE--CCEEEEEEcc
Confidence 34577776 356999995 78999999987 34443221 00 224556777765 6899999999
Q ss_pred CCeEEEEECCC
Q 011435 211 NAALRQISLNQ 221 (486)
Q Consensus 211 n~rIr~id~~G 221 (486)
.+.|.+||+..
T Consensus 191 ~~~I~vIDp~t 201 (262)
T 3nol_A 191 TNKIVRIDPET 201 (262)
T ss_dssp SSEEEEECTTT
T ss_pred CCeEEEEECCC
Confidence 99999999874
No 90
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.09 E-value=3.6e-05 Score=76.19 Aligned_cols=128 Identities=11% Similarity=0.045 Sum_probs=84.6
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccC
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFN 135 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln 135 (486)
++...|.++..+. ... .+..||+++. +.||++++.+++|.++|.++. .++ +++. ..+
T Consensus 80 iD~~Tgkv~~~~l-~~~--~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl-----~~~-~ti~-~~~------------ 136 (268)
T 3nok_A 80 LSLESAQPVWMER-LGN--IFAEGLASDG-ERLYQLTWTEGLLFTWSGMPP-----QRE-RTTR-YSG------------ 136 (268)
T ss_dssp CCSSCSSCSEEEE-CTT--CCEEEEEECS-SCEEEEESSSCEEEEEETTTT-----EEE-EEEE-CSS------------
T ss_pred EECCCCcEEeEEC-CCC--cceeEEEEeC-CEEEEEEccCCEEEEEECCcC-----cEE-EEEe-CCC------------
Confidence 4555665555552 221 2357788864 479999999999999998642 222 1110 001
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCC
Q 011435 136 HPKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNA 212 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~ 212 (486)
.+.||+.|. +.||++| +.++|+++|+.. +.+|.-+. ++ ..+..++.+.++ +|.||+.....+
T Consensus 137 eGwGLt~Dg-~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~-------~g----~~v~~lNeLe~~--dG~lyanvw~s~ 201 (268)
T 3nok_A 137 EGWGLCYWN-GKLVRSD-GGTMLTFHEPDGFALVGAVQVKL-------RG----QPVELINELECA--NGVIYANIWHSS 201 (268)
T ss_dssp CCCCEEEET-TEEEEEC-SSSEEEEECTTTCCEEEEEECEE-------TT----EECCCEEEEEEE--TTEEEEEETTCS
T ss_pred ceeEEecCC-CEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC-------CC----cccccccccEEe--CCEEEEEECCCC
Confidence 346788763 4699999 589999999887 34443221 01 224556778765 789999999999
Q ss_pred eEEEEECCC
Q 011435 213 ALRQISLNQ 221 (486)
Q Consensus 213 rIr~id~~G 221 (486)
.|.+||+..
T Consensus 202 ~I~vIDp~T 210 (268)
T 3nok_A 202 DVLEIDPAT 210 (268)
T ss_dssp EEEEECTTT
T ss_pred eEEEEeCCC
Confidence 999999874
No 91
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.09 E-value=2.3e-05 Score=82.28 Aligned_cols=96 Identities=11% Similarity=0.000 Sum_probs=67.5
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEEC---------CCCEEEEEcCCCCcccccEEEecccCCccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDE---------VNSNIVKITPPLSQYSRGRLVAGSFQGYTG 123 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~---------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G 123 (486)
++++...+.++.++..|. .| ||++++||+ |||++. ..+.|.+||..+... ..++.++.. +.
T Consensus 102 sVID~~t~~vv~~I~vG~----~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v-v~~I~v~g~-~r-- 172 (426)
T 3c75_H 102 FVIDGSTGRILGMTDGGF----LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP-IADIELPDA-PR-- 172 (426)
T ss_dssp EEEETTTTEEEEEEEECS----SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-EEEEEETTC-CC--
T ss_pred EEEECCCCEEEEEEECCC----CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE-EEEEECCCc-cc--
Confidence 446677777777777664 49 999999998 999986 356799999875431 111222200 00
Q ss_pred cCCCCccccccCCcceEEEcCCCC-EEEEeCC-CCEEEEEcCCC
Q 011435 124 HVDGKPNEARFNHPKGVTMDDKGN-LYVADTL-NLAIRKIGDAG 165 (486)
Q Consensus 124 ~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~-n~rIrkid~~G 165 (486)
......|.++++++||+ |||++.. .+.|.+||...
T Consensus 173 -------~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 173 -------FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp -------CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred -------cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 00124799999999997 9999975 78999999876
No 92
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.08 E-value=0.00038 Score=68.56 Aligned_cols=126 Identities=17% Similarity=0.302 Sum_probs=88.7
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCcccccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARF 134 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~L 134 (486)
++...+..+..+..+. .+.+++++++|+ ||++....+.|..++..+.. ....... -
T Consensus 59 ~d~~~~~~~~~~~~~~----~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~---~~~~~~~----------------~ 115 (391)
T 1l0q_A 59 IDTATNNVIATVPAGS----SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT---VAGTVKT----------------G 115 (391)
T ss_dssp EETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEEC----------------S
T ss_pred EECCCCeEEEEEECCC----CccceEECCCCCEEEEEECCCCEEEEEECCCCe---EEEEEeC----------------C
Confidence 4445555555544333 589999999988 88999888999999987432 1111110 0
Q ss_pred CCcceEEEcCCCC-EEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeC
Q 011435 135 NHPKGVTMDDKGN-LYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDR 209 (486)
Q Consensus 135 n~P~GIavD~dG~-LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~ 209 (486)
..+.+++++++|+ ||++...++.|+.+|... +..+..+ ..|.++++ .++| .||++..
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-----------------~~~~~~~~-~~dg~~l~~~~~ 177 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-----------------RSPKGIAV-TPDGTKVYVANF 177 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-----------------SSEEEEEE-CTTSSEEEEEET
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-----------------CCcceEEE-CCCCCEEEEEeC
Confidence 1478999999998 889999899999999755 3333322 13567774 5555 6889999
Q ss_pred CCCeEEEEECCCC
Q 011435 210 GNAALRQISLNQD 222 (486)
Q Consensus 210 gn~rIr~id~~G~ 222 (486)
.++.|+.+++...
T Consensus 178 ~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 178 DSMSISVIDTVTN 190 (391)
T ss_dssp TTTEEEEEETTTT
T ss_pred CCCEEEEEECCCC
Confidence 9999999998764
No 93
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.07 E-value=6.6e-05 Score=74.09 Aligned_cols=141 Identities=11% Similarity=0.066 Sum_probs=88.0
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccC
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFN 135 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln 135 (486)
++..+...+.++..+. .+.|++.|. +.||++|. .++|.++|+.+... ..++-++. +| ..+.
T Consensus 112 ~D~~t~~~~~ti~~~~----eG~glt~dg-~~L~~SdG-s~~i~~iDp~T~~v-~~~I~V~~--------~g----~~~~ 172 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDG----EGWGLTHND-QYLIMSDG-TPVLRFLDPESLTP-VRTITVTA--------HG----EELP 172 (262)
T ss_dssp EETTTCCEEEEEECSS----CCCCEEECS-SCEEECCS-SSEEEEECTTTCSE-EEEEECEE--------TT----EECC
T ss_pred EECccCcEEEEEECCC----CceEEecCC-CEEEEECC-CCeEEEEcCCCCeE-EEEEEecc--------CC----cccc
Confidence 4555566666655432 245666542 45999995 78999999975431 11122221 01 1345
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCCC--c-eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCC
Q 011435 136 HPKGVTMDDKGNLYVADTLNLAIRKIGDAG--V-TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNA 212 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~rIrkid~~G--v-~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~ 212 (486)
.++.+.+. +|.||++.+..+.|.+||+.. | .+|.-.. .+.+..........|+|||+....++|||+...=-
T Consensus 173 ~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~----L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 173 ELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNG----ILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTT----GGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS
T ss_pred ccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCc----CccccccccCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 67778877 789999999999999999865 3 3442210 00000001122457899998777889999998777
Q ss_pred eEEEEECC
Q 011435 213 ALRQISLN 220 (486)
Q Consensus 213 rIr~id~~ 220 (486)
++.+|.+.
T Consensus 248 ~~~ev~~~ 255 (262)
T 3nol_A 248 KVFEITLT 255 (262)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 78777754
No 94
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.06 E-value=8.5e-05 Score=75.85 Aligned_cols=130 Identities=10% Similarity=-0.028 Sum_probs=82.7
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEEC---------CCCEEEEEcCCCCcccccEEEecccCCccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDE---------VNSNIVKITPPLSQYSRGRLVAGSFQGYTG 123 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~---------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G 123 (486)
.+++...+.++.++..|. .| +|++++||+ |||++. ..+.|.+||..+... ..++-++. .+
T Consensus 50 ~v~D~~t~~~~~~i~~g~----~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~-~~~i~~~~----~~ 119 (373)
T 2mad_H 50 WVLDAGSGSILGHVNGGF----LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP-IADIELPD----AP 119 (373)
T ss_pred EEEECCCCeEEEEecCCC----CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE-EEEEECCC----cc
Confidence 456777777777766653 48 999999997 999985 246789999863210 01111110 00
Q ss_pred cCCCCccccccCCcceEEEcCCCC-EEEEeCC-CCEEEEEcCCC---ceE-EcCCCCCCCCcCCCCccccccCCCceeEE
Q 011435 124 HVDGKPNEARFNHPKGVTMDDKGN-LYVADTL-NLAIRKIGDAG---VTT-IAGGKSNVAGFRDGPSEDAKFSNDFDVVY 197 (486)
Q Consensus 124 ~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~-n~rIrkid~~G---v~t-iaGg~~g~~G~~DG~~~~a~f~~P~gIa~ 197 (486)
. ......|.++++++||+ |||++.. .+.|.+|| .. +.+ +. .|.++.+
T Consensus 120 ~------~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~--------------------~~~~~~~ 172 (373)
T 2mad_H 120 R------FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS--------------------SPTCYHI 172 (373)
T ss_pred c------cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC--------------------CCceEEE
Confidence 0 00014699999999998 9999865 68999999 66 233 21 1222333
Q ss_pred EcCCCeEEEEeCCCCeEEEEECC
Q 011435 198 VRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 198 vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
.....++|++...++++..|+..
T Consensus 173 ~~~~~~~~~~~~~dg~~~~vd~~ 195 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDHA 195 (373)
T ss_pred EeCCCceEEEEcCCCCEEEEECC
Confidence 34445677777777777777773
No 95
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.04 E-value=0.00029 Score=70.13 Aligned_cols=129 Identities=16% Similarity=0.103 Sum_probs=78.3
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCC-CCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPP-LSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~-g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
..|.++++++||+ ||++|.+.++|..++.+ .. +...+ +...... .-..|.+|+++++|+ |||+
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g---~~~~~-~~~~~~~----------~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASG---EVELV-GSVDAPD----------PGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS---CEEEE-EEEECSS----------TTCCEEEEEECTTSSEEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC---CEEEe-eeEecCC----------CCCCCCEeEECCCCCEEEEE
Confidence 4689999999997 89999888899999875 22 22211 1100000 012599999999997 8999
Q ss_pred eCCCCEEEEEc--C-CC-ce----EEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCC-----eEEEE
Q 011435 152 DTLNLAIRKIG--D-AG-VT----TIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNA-----ALRQI 217 (486)
Q Consensus 152 D~~n~rIrkid--~-~G-v~----tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~-----rIr~i 217 (486)
+..++.|..++ . +| +. ++.....+..+.. +.. .....|.++++++++| .||+++.+.+ +|..+
T Consensus 211 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~ 287 (365)
T 1jof_A 211 MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD-PET--GKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGF 287 (365)
T ss_dssp ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC-TTT--SSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEE
T ss_pred ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc-ccc--ccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEE
Confidence 98888887764 3 34 32 1211100000000 000 0112477887245666 6999998765 88888
Q ss_pred ECC
Q 011435 218 SLN 220 (486)
Q Consensus 218 d~~ 220 (486)
+.+
T Consensus 288 ~~~ 290 (365)
T 1jof_A 288 KLR 290 (365)
T ss_dssp EEC
T ss_pred EEC
Confidence 874
No 96
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.02 E-value=0.00044 Score=68.10 Aligned_cols=126 Identities=17% Similarity=0.332 Sum_probs=89.2
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCcccccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARF 134 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~L 134 (486)
++...+..+..+..+. .+.+++++++|. ||++...++.|..++..... ....... -
T Consensus 17 ~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~---~~~~~~~----------------~ 73 (391)
T 1l0q_A 17 IDVTSNKVTATIPVGS----NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN---VIATVPA----------------G 73 (391)
T ss_dssp EETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE---EEEEEEC----------------S
T ss_pred EECCCCeEEEEeecCC----CcceEEECCCCCEEEEECCCCCeEEEEECCCCe---EEEEEEC----------------C
Confidence 5556666666555432 389999999997 78998888999999986432 2111110 0
Q ss_pred CCcceEEEcCCCC-EEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeC
Q 011435 135 NHPKGVTMDDKGN-LYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDR 209 (486)
Q Consensus 135 n~P~GIavD~dG~-LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~ 209 (486)
..+.+++++++|+ ||++...++.|+++|... +..+... ..+.+++ ..++| .||++..
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-----------------~~~~~~~-~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-----------------KSPLGLA-LSPDGKKLYVTNN 135 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-----------------SSEEEEE-ECTTSSEEEEEET
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-----------------CCcceEE-ECCCCCEEEEEeC
Confidence 1588999999998 889998889999999775 3333221 1356777 45555 5889999
Q ss_pred CCCeEEEEECCCC
Q 011435 210 GNAALRQISLNQD 222 (486)
Q Consensus 210 gn~rIr~id~~G~ 222 (486)
.++.|+.++....
T Consensus 136 ~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 136 GDKTVSVINTVTK 148 (391)
T ss_dssp TTTEEEEEETTTT
T ss_pred CCCEEEEEECCCC
Confidence 8999999998753
No 97
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.02 E-value=0.00017 Score=70.33 Aligned_cols=144 Identities=17% Similarity=0.141 Sum_probs=92.7
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEAR 133 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~ 133 (486)
.+++..+...+.++..+. .+.||+.| .+.||++|. .++|..+|+.+... ..++-++. .| ..
T Consensus 88 ~v~D~~tl~~~~ti~~~~----~Gwglt~d-g~~L~vSdg-s~~l~~iDp~t~~~-~~~I~V~~----~g--------~~ 148 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPG----EGWALTSD-DSHLYMSDG-TAVIRKLDPDTLQQ-VGSIKVTA----GG--------RP 148 (243)
T ss_dssp EEEETTTTEEEEEEECSS----CCCEEEEC-SSCEEEECS-SSEEEEECTTTCCE-EEEEECEE----TT--------EE
T ss_pred EEEECCcCcEEEEEeCCC----CceEEeeC-CCEEEEECC-CCeEEEEeCCCCeE-EEEEEEcc----CC--------cc
Confidence 346666777777776543 25666654 346999995 78999999975431 11122221 11 12
Q ss_pred cCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC--c-eEEcCCCCCCCCcCCCCc-cccccCCCceeEEEcCCCeEEEEeC
Q 011435 134 FNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG--V-TTIAGGKSNVAGFRDGPS-EDAKFSNDFDVVYVRPTCSLLVIDR 209 (486)
Q Consensus 134 Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G--v-~tiaGg~~g~~G~~DG~~-~~a~f~~P~gIa~vd~~G~LYVaD~ 209 (486)
+...+.|... +|.||++.+..+.|.+||+.. | .+|.-. + .+.+... .......|+|||+....++|||+.-
T Consensus 149 ~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~--~--l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 149 LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQ--A--LVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECG--G--GSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECC--c--CccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4466778876 789999999999999999865 3 333221 0 0000000 0123457899998777889999998
Q ss_pred CCCeEEEEECCC
Q 011435 210 GNAALRQISLNQ 221 (486)
Q Consensus 210 gn~rIr~id~~G 221 (486)
.=.++.+|.+..
T Consensus 224 ~wp~~~~v~~~~ 235 (243)
T 3mbr_X 224 RWPMLYEIRLTP 235 (243)
T ss_dssp TCSEEEEEEECC
T ss_pred CCCcEEEEEEec
Confidence 878888888754
No 98
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.97 E-value=0.00026 Score=67.47 Aligned_cols=132 Identities=12% Similarity=0.073 Sum_probs=84.2
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCcccccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARF 134 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~L 134 (486)
++...+..+.++..+... ..|.++++++||+ ||+++...+.|.+++..+.. ....+... ..+ ..-
T Consensus 16 ~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~---~~~--------~~~ 81 (337)
T 1pby_B 16 IDTEKMAVDKVITIADAG-PTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--TLGRIDLS---TPE--------ERV 81 (337)
T ss_dssp EETTTTEEEEEEECTTCT-TCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--EEEEEECC---BTT--------EEE
T ss_pred EECCCCcEEEEEEcCCCC-CCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--eEeeEEcC---Ccc--------ccc
Confidence 566666666665533210 0389999999995 89999988999999986432 11112110 000 001
Q ss_pred CCcceEEEcCCCC-EEEEeC-----------CCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEc
Q 011435 135 NHPKGVTMDDKGN-LYVADT-----------LNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVR 199 (486)
Q Consensus 135 n~P~GIavD~dG~-LYVAD~-----------~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd 199 (486)
..|.+++++++|+ ||+++. .++.|+++|..+ +..+..+ ..|.+++ ++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-----------------~~~~~~~-~s 143 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-----------------RQITMLA-WA 143 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-----------------SSCCCEE-EC
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-----------------CCcceeE-EC
Confidence 2588999999996 999962 358999999766 2333221 1366777 45
Q ss_pred CCCe-EEEEeCCCCeEEEEECCCC
Q 011435 200 PTCS-LLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 200 ~~G~-LYVaD~gn~rIr~id~~G~ 222 (486)
++|+ ||++ ++.|..+++...
T Consensus 144 ~dg~~l~~~---~~~i~~~d~~~~ 164 (337)
T 1pby_B 144 RDGSKLYGL---GRDLHVMDPEAG 164 (337)
T ss_dssp TTSSCEEEE---SSSEEEEETTTT
T ss_pred CCCCEEEEe---CCeEEEEECCCC
Confidence 5554 8888 467888887653
No 99
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.93 E-value=0.00076 Score=64.36 Aligned_cols=122 Identities=15% Similarity=0.129 Sum_probs=80.2
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEe-cccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVA-GSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~va-G~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
..|.+++++++|+ ||+++..++.|..++.+.. +....+. ....... -..|.+++++++|+ ||++
T Consensus 129 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~~~pdg~~l~~~ 195 (343)
T 1ri6_A 129 DGCHSANISPDNRTLWVPALKQDRICLFTVSDD--GHLVAQDPAEVTTVE-----------GAGPRHMVFHPNEQYAYCV 195 (343)
T ss_dssp TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT--SCEEEEEEEEEECST-----------TCCEEEEEECTTSSEEEEE
T ss_pred CCceEEEECCCCCEEEEecCCCCEEEEEEecCC--CceeeecccccccCC-----------CCCcceEEECCCCCEEEEE
Confidence 3589999999996 9999977889999887531 1122111 0000000 12588999999998 9999
Q ss_pred eCCCCEEEEEcCC---C-ce---EEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEEEEECC
Q 011435 152 DTLNLAIRKIGDA---G-VT---TIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALRQISLN 220 (486)
Q Consensus 152 D~~n~rIrkid~~---G-v~---tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr~id~~ 220 (486)
+..++.|..++.+ | +. .+.... .++ .....|.+++ .+++| .||+++..++.|.+++.+
T Consensus 196 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~~---~~~-------~~~~~~~~i~-~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 196 NELNSSVDVWELKDPHGNIECVQTLDMMP---ENF-------SDTRWAADIH-ITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ETTTTEEEEEESSCTTSCCEEEEEEECSC---TTC-------CSCCCEEEEE-ECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eCCCCEEEEEEecCCCCcEEEEeeccccC---ccc-------cccCCccceE-ECCCCCEEEEEecCCCEEEEEEEc
Confidence 9888999999864 3 22 121110 010 1123466787 45666 799999999999999987
No 100
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.93 E-value=0.00046 Score=73.80 Aligned_cols=137 Identities=9% Similarity=0.049 Sum_probs=90.0
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcC--CCCcccccEEEecccCCccccCCCCcccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITP--PLSQYSRGRLVAGSFQGYTGHVDGKPNEA 132 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~--~g~~~~~~~~vaG~~~G~~G~~dG~~~~a 132 (486)
++...+..+.++..|.. |+++++++||+ ||+++.. +.|.++|. .... ....+.. |
T Consensus 164 ~D~~t~~~~~~i~~g~~----~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~--~~~~i~~------g--------- 221 (543)
T 1nir_A 164 VDGDSKKIVKVIDTGYA----VHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPT--KVAEIKI------G--------- 221 (543)
T ss_dssp EETTTCCEEEEEECSTT----EEEEEECTTSCEEEEEETT-SEEEEEETTSSSCE--EEEEEEC------C---------
T ss_pred EECCCceEEEEEecCcc----cceEEECCCCCEEEEECCC-CeEEEEECcCCCCc--EEEEEec------C---------
Confidence 45555666666554433 89999999997 8999876 89999998 3211 1111111 1
Q ss_pred ccCCcceEEEcC----CCC-EEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeE
Q 011435 133 RFNHPKGVTMDD----KGN-LYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSL 204 (486)
Q Consensus 133 ~Ln~P~GIavD~----dG~-LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~L 204 (486)
..|.+|++++ +|+ |||++...+.|..+|... +.++...... .++.. -..-..+..|++...++.+
T Consensus 222 --~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~----~~~~~-~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 222 --IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT----VDTQT-YHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC----SSSCC-EESCCCEEEEEECSSSSEE
T ss_pred --CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc----cCccc-cccCCceEEEEECCCCCEE
Confidence 1589999999 998 999998789999998665 4444332100 00000 0001245677755556789
Q ss_pred EEEeCCCCeEEEEECCC
Q 011435 205 LVIDRGNAALRQISLNQ 221 (486)
Q Consensus 205 YVaD~gn~rIr~id~~G 221 (486)
||+...+++|+.++...
T Consensus 295 ~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKD 311 (543)
T ss_dssp EEEETTTTEEEEEECTT
T ss_pred EEEECCCCeEEEEEecC
Confidence 99999999999999874
No 101
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.91 E-value=4.4e-05 Score=78.51 Aligned_cols=132 Identities=8% Similarity=-0.089 Sum_probs=87.9
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEEC---------CCCEEEEEcCCCCcccccEEEecccCCccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDE---------VNSNIVKITPPLSQYSRGRLVAGSFQGYTG 123 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~---------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G 123 (486)
++++...+.++.++..|.. | ++++++||. |||+++ ..+.|.+||+.+... ..++.+|. ..
T Consensus 49 svID~~t~~v~~~i~vG~~----P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v-v~~I~v~~---~~- 118 (368)
T 1mda_H 49 WVSCAGCGVTLGHSLGAFL----S-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP-IADIELPD---AP- 118 (368)
T ss_dssp EEEETTTTEEEEEEEECTT----C-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE-EEEEEETT---SC-
T ss_pred EEEECCCCeEEEEEeCCCC----C-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE-EEEEECCC---cc-
Confidence 4788889999999887754 9 999999987 999984 357899999975431 11222321 00
Q ss_pred cCCCCccccccCCcceEEEcCCCC-EEEEeCC-CCEEEE--EcCCCceEEcCCCCCCCCcCCCCccccccCCCceeEEEc
Q 011435 124 HVDGKPNEARFNHPKGVTMDDKGN-LYVADTL-NLAIRK--IGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVR 199 (486)
Q Consensus 124 ~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~-n~rIrk--id~~Gv~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd 199 (486)
.......|.+|++++||+ |||++.. .+.|.+ ||...+.++.-+ + ...+ ..
T Consensus 119 ------~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~-----~-------------~~~~--~p 172 (368)
T 1mda_H 119 ------RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA-----S-------------CFHI--HP 172 (368)
T ss_dssp ------SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECS-----S-------------CCCC--EE
T ss_pred ------ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECC-----C-------------ceEE--cc
Confidence 001124799999999997 9999975 678888 887654444221 0 0111 23
Q ss_pred CCCeEEEEeCCCCeEEEEECCC
Q 011435 200 PTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 200 ~~G~LYVaD~gn~rIr~id~~G 221 (486)
....+|++...++++..++.+.
T Consensus 173 ~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 173 GAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp EETTEEECCCCTTSCEEEECCS
T ss_pred CCCeEEEEEcCCCCEEEEECcc
Confidence 3345777777777777777764
No 102
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.87 E-value=0.00051 Score=74.38 Aligned_cols=87 Identities=10% Similarity=0.083 Sum_probs=63.7
Q ss_pred EEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCC--CCcccccEEEecccCCccccCCCCccc
Q 011435 55 VLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPP--LSQYSRGRLVAGSFQGYTGHVDGKPNE 131 (486)
Q Consensus 55 vv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~--g~~~~~~~~vaG~~~G~~G~~dG~~~~ 131 (486)
+++...+.++.++..|. .|+++++++||+ |||++. .+.|.+||.. ... -..++..|.
T Consensus 181 viD~~t~~v~~~i~~g~----~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~-~v~~i~~G~-------------- 240 (567)
T 1qks_A 181 LIDGSTYEIKTVLDTGY----AVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPT-TVAEIKIGS-------------- 240 (567)
T ss_dssp EEETTTCCEEEEEECSS----CEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCC-EEEEEECCS--------------
T ss_pred EEECCCCeEEEEEeCCC----CccceEECCCCCEEEEEcC-CCeEEEEECCCCCCc-EeEEEecCC--------------
Confidence 36666677777776554 489999999998 899874 5699999984 211 011122221
Q ss_pred cccCCcceEEEc----CCCC-EEEEeCCCCEEEEEcCCC
Q 011435 132 ARFNHPKGVTMD----DKGN-LYVADTLNLAIRKIGDAG 165 (486)
Q Consensus 132 a~Ln~P~GIavD----~dG~-LYVAD~~n~rIrkid~~G 165 (486)
.|.+|+++ +||+ |||++...+.|.+||...
T Consensus 241 ----~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 241 ----EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp ----EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred ----CCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 59999999 5997 999999999999999765
No 103
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.85 E-value=0.00025 Score=70.21 Aligned_cols=118 Identities=11% Similarity=0.088 Sum_probs=81.2
Q ss_pred cEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEE
Q 011435 62 YLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVT 141 (486)
Q Consensus 62 ~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIa 141 (486)
.++.++.-... .+-.||.++ ++.||++....++|.++|+.+...-. .+ .+. .. ...||+
T Consensus 44 ~Vv~~~phd~~--~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~-~~-l~~--~~--------------FgeGit 102 (268)
T 3nok_A 44 HIIREYPHATN--AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVW-ME-RLG--NI--------------FAEGLA 102 (268)
T ss_dssp EEEEEEECCTT--CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSE-EE-ECT--TC--------------CEEEEE
T ss_pred EEEEEEcCCCc--cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEe-EE-CCC--Cc--------------ceeEEE
Confidence 45555543332 234799997 57999999999999999998654211 11 221 11 125788
Q ss_pred EcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEE
Q 011435 142 MDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIS 218 (486)
Q Consensus 142 vD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id 218 (486)
++. +.||++++.++++.++|.+. +.+|.-. ..+.+++. +.+.||++| ++++|+.+|
T Consensus 103 ~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-----------------~eGwGLt~--Dg~~L~vSd-Gs~~l~~iD 161 (268)
T 3nok_A 103 SDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYS-----------------GEGWGLCY--WNGKLVRSD-GGTMLTFHE 161 (268)
T ss_dssp ECS-SCEEEEESSSCEEEEEETTTTEEEEEEECS-----------------SCCCCEEE--ETTEEEEEC-SSSEEEEEC
T ss_pred EeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCC-----------------CceeEEec--CCCEEEEEC-CCCEEEEEc
Confidence 874 47999999999999999877 4455322 12456763 357899999 689999999
Q ss_pred CCC
Q 011435 219 LNQ 221 (486)
Q Consensus 219 ~~G 221 (486)
+..
T Consensus 162 p~T 164 (268)
T 3nok_A 162 PDG 164 (268)
T ss_dssp TTT
T ss_pred CCC
Confidence 875
No 104
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.84 E-value=0.00049 Score=68.46 Aligned_cols=132 Identities=12% Similarity=0.058 Sum_probs=77.8
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccE----EEecccCCccccCCCCccccccCCcceEE-EcCCCC-
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGR----LVAGSFQGYTGHVDGKPNEARFNHPKGVT-MDDKGN- 147 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~----~vaG~~~G~~G~~dG~~~~a~Ln~P~GIa-vD~dG~- 147 (486)
..|.++++++||+ ||+++..++.|..++.+... +... .+.....+..|. .+... ....|.+|+ +++||+
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT-HMPVYTHHSFPLIPPGIPDR-DPETG--KGLYRADVCALTFSGKY 268 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT-CCEEEEEEEEESSCTTCCCB-CTTTS--SBSEEEEEEEECTTSSE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC-CcEEEccceEEcCCCCcCCc-ccccc--cccccccEEEECCCCCE
Confidence 4599999999996 89999877887776543110 1111 111110011110 00000 122588999 999997
Q ss_pred EEEEeCCCC-----EEEEEcC--CC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEc---CCCeEEEEeCCCCeEEE
Q 011435 148 LYVADTLNL-----AIRKIGD--AG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVR---PTCSLLVIDRGNAALRQ 216 (486)
Q Consensus 148 LYVAD~~n~-----rIrkid~--~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd---~~G~LYVaD~gn~rIr~ 216 (486)
||+++...+ +|..++. +| +..+..... ..-..|.++++.. +...||+++..++.|..
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~------------~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v 336 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP------------TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEI 336 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE------------CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred EEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeee------------cCCCCcccceecCCCcCCCEEEEEEcCCCeEEE
Confidence 899987655 7777753 45 433211000 0012366777544 35689999988899999
Q ss_pred EECCCC
Q 011435 217 ISLNQD 222 (486)
Q Consensus 217 id~~G~ 222 (486)
++.++.
T Consensus 337 ~~~~~~ 342 (365)
T 1jof_A 337 YRWKDE 342 (365)
T ss_dssp EEEETT
T ss_pred EEEchh
Confidence 988753
No 105
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.77 E-value=0.00015 Score=76.21 Aligned_cols=109 Identities=13% Similarity=0.107 Sum_probs=73.1
Q ss_pred cCC-eEEEEECCC----CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeC----
Q 011435 84 EDG-ELFAVDEVN----SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADT---- 153 (486)
Q Consensus 84 ~dG-~LYVaD~~n----~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~---- 153 (486)
+++ .|||++... +.|.+||...... ..++-.|. .| ||++++||+ |||++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~v-v~~I~vG~------------------~P-gia~SpDgk~lyVan~~~~~ 141 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRI-LGMTDGGF------------------LP-HPVAAEDGSFFAQASTVFER 141 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEE-EEEEEECS------------------SC-EEEECTTSSCEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEE-EEEEECCC------------------CC-ceEECCCCCEEEEEeccccc
Confidence 344 499999865 7999999875321 11122221 59 999999998 999996
Q ss_pred -----CCCEEEEEcCCC---ceEEc-CCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC-CCeEEEEECCCC
Q 011435 154 -----LNLAIRKIGDAG---VTTIA-GGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG-NAALRQISLNQD 222 (486)
Q Consensus 154 -----~n~rIrkid~~G---v~tia-Gg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-n~rIr~id~~G~ 222 (486)
..+.|.+||... +.+|. ++.. .......|.++++..+.+.|||++.. ++.|.+||....
T Consensus 142 ~~~G~~~~~VsviD~~t~~vv~~I~v~g~~----------r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 142 IARGKRTDYVEVFDPVTFLPIADIELPDAP----------RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp TTEEEEEEEEEEECTTTCCEEEEEEETTCC----------CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred cccCCCCCEEEEEECCCCcEEEEEECCCcc----------ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 356899999876 34442 2100 00012468899854444489999975 789999998853
No 106
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.74 E-value=0.00014 Score=71.24 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=58.3
Q ss_pred ccceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC
Q 011435 75 VVPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT 153 (486)
Q Consensus 75 ~~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 153 (486)
..+.+|++|+ .|+|||....+++|+.+|.+|.. .-..--..|..| ....+.+|.|||+|++|+|||+..
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~----~~~~~L~~g~~~------l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEV----IGEMSLTKGSRG------LSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTTCCE----EEEEECSTTGGG------CSSCCCSEEEEEECTTCCEEEEET
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCE----EEEEEcCCccCC------cccccCCCCeeEECCCCCEEEEcC
Confidence 4789999997 68899999999999999998643 211111012222 133478999999999999999976
Q ss_pred CCCEEEEEcCC
Q 011435 154 LNLAIRKIGDA 164 (486)
Q Consensus 154 ~n~rIrkid~~ 164 (486)
. |.+++|.+.
T Consensus 243 ~-n~~y~f~~~ 252 (255)
T 3qqz_A 243 P-NRFYRFTPQ 252 (255)
T ss_dssp T-TEEEEEEC-
T ss_pred C-ceEEEEEec
Confidence 5 599999764
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.74 E-value=0.00099 Score=66.53 Aligned_cols=109 Identities=15% Similarity=0.140 Sum_probs=78.5
Q ss_pred cceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeC
Q 011435 76 VPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADT 153 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 153 (486)
.|.+++++++|+ ||++...++.|..++.++.. ....... ...|.+++++++|. ||+++.
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~---~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK---VQKSIPV----------------FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTTTE---EEEEEEC----------------SSSEEEEEECTTSSEEEEEEC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCCCc---EEEEecC----------------CCCCCeEEEcCCCCEEEEEec
Confidence 578999999995 99999999999999987432 1111111 12578999999998 899887
Q ss_pred CC--------------CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEE
Q 011435 154 LN--------------LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALR 215 (486)
Q Consensus 154 ~n--------------~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr 215 (486)
.+ +.|+.+|... +..+.+. ..|.++++ .++| .|+++...++.|+
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-----------------~~~~~~~~-s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-----------------NQPTGLDV-SPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-----------------SSEEEEEE-CTTSCEEEEEETTTTEEE
T ss_pred CCCccccccccccccceEEEEEECCCCcEEEEecCC-----------------CCCceEEE-cCCCCEEEEEECCCCeEE
Confidence 64 4899999755 3344321 23678875 5555 6788888889999
Q ss_pred EEECCC
Q 011435 216 QISLNQ 221 (486)
Q Consensus 216 ~id~~G 221 (486)
.++.++
T Consensus 427 v~~~~~ 432 (433)
T 3bws_A 427 VYRRDG 432 (433)
T ss_dssp EEEETT
T ss_pred EEEecC
Confidence 998764
No 108
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.73 E-value=0.00042 Score=71.91 Aligned_cols=132 Identities=13% Similarity=0.028 Sum_probs=84.7
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEEC---------CCCEEEEEcCCCCcccccEEEecccCCccc
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDE---------VNSNIVKITPPLSQYSRGRLVAGSFQGYTG 123 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~---------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G 123 (486)
.+++...+.++.++..|.. |. |++++||. |||++. ..+.|.+||..+... ..++.++. |..
T Consensus 62 ~ViD~~t~~v~~~I~vG~~----P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v-~~~I~v~~--g~r- 132 (386)
T 3sjl_D 62 FVIDGEAGRVIGMIDGGFL----PN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP-TADIELPD--APR- 132 (386)
T ss_dssp EEEETTTTEEEEEEEECSS----CE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-EEEEEETT--CCC-
T ss_pred EEEECCCCeEEEEEECCCC----Cc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE-EEEEECCC--ccc-
Confidence 4577778888888876654 85 99999998 999984 245799999875431 11122221 000
Q ss_pred cCCCCccccccCCcceEEEcCCCC-EEEEeCC-CCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCce---e
Q 011435 124 HVDGKPNEARFNHPKGVTMDDKGN-LYVADTL-NLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFD---V 195 (486)
Q Consensus 124 ~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~-n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~g---I 195 (486)
...-..|.++++++||. |||++.. .+.|.+||... +.+|.-. |+ ....|.+ +
T Consensus 133 -------~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-----g~--------~~~~P~g~~~~ 192 (386)
T 3sjl_D 133 -------FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-----DC--------YHIFPTAPDTF 192 (386)
T ss_dssp -------CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-----SE--------EEEEEEETTEE
T ss_pred -------cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-----Cc--------ceeecCCCcee
Confidence 00123799999999998 9999974 78999999876 4555321 11 0112333 2
Q ss_pred EEEcCCCeEEEEeCCC-CeE
Q 011435 196 VYVRPTCSLLVIDRGN-AAL 214 (486)
Q Consensus 196 a~vd~~G~LYVaD~gn-~rI 214 (486)
+.+..+|.+++.+... +++
T Consensus 193 ~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEETTSCEEEEECCSSSCC
T ss_pred EEECCCCCEEEEECCCCCeE
Confidence 2356677777777764 565
No 109
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.72 E-value=0.00084 Score=64.37 Aligned_cols=130 Identities=9% Similarity=0.098 Sum_probs=82.1
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEe-cccCCccccCCCCccccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVA-GSFQGYTGHVDGKPNEAR 133 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~va-G~~~G~~G~~dG~~~~a~ 133 (486)
++...+..+.++..+.. ..|.++++++||+ +|+++..++.|.+++..+.. ....+. +. .. ...
T Consensus 26 ~d~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~--~~~~~~~~~---~~--------~~~ 90 (349)
T 1jmx_B 26 VDVASDTVYKSCVMPDK--FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK--NTFHANLSS---VP--------GEV 90 (349)
T ss_dssp EETTTTEEEEEEECSSC--CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEESCC---ST--------TEE
T ss_pred EECCCCcEEEEEecCCC--CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--EEEEEEccc---cc--------ccc
Confidence 55566666665543321 1489999999997 89999889999999986432 111111 11 00 001
Q ss_pred cCCcceEEEcCCCC-EEEEeCC-----------CCEEEEEcCCC---c---eEEcCCCCCCCCcCCCCccccccCCCcee
Q 011435 134 FNHPKGVTMDDKGN-LYVADTL-----------NLAIRKIGDAG---V---TTIAGGKSNVAGFRDGPSEDAKFSNDFDV 195 (486)
Q Consensus 134 Ln~P~GIavD~dG~-LYVAD~~-----------n~rIrkid~~G---v---~tiaGg~~g~~G~~DG~~~~a~f~~P~gI 195 (486)
-..|.+++++++|+ ||+++.. ++.|.++|... . ..+... ..+.++
T Consensus 91 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----------------~~~~~~ 153 (349)
T 1jmx_B 91 GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-----------------RQVYLM 153 (349)
T ss_dssp EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-----------------SSCCCE
T ss_pred cccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-----------------Ccccce
Confidence 23589999999997 8888854 57899998654 1 111110 135567
Q ss_pred EEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 196 VYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 196 a~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
+ .+++|.||+++ +.|.+++...
T Consensus 154 ~-~s~dg~l~~~~---~~i~~~d~~~ 175 (349)
T 1jmx_B 154 R-AADDGSLYVAG---PDIYKMDVKT 175 (349)
T ss_dssp E-ECTTSCEEEES---SSEEEECTTT
T ss_pred e-ECCCCcEEEcc---CcEEEEeCCC
Confidence 6 56777788853 3488888764
No 110
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.71 E-value=0.00017 Score=74.81 Aligned_cols=111 Identities=14% Similarity=0.106 Sum_probs=73.0
Q ss_pred ccCCe-EEEEECC----CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCC--
Q 011435 83 SEDGE-LFAVDEV----NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTL-- 154 (486)
Q Consensus 83 d~dG~-LYVaD~~----n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~-- 154 (486)
.++|+ |||+|.. .++|.+||...... ..++-.|. .| +|++++||. |||+++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v-~~~I~vG~------------------~P-~va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRV-IGMIDGGF------------------LP-NPVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEE-EEEEEECS------------------SC-EEEECTTSSCEEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeE-EEEEECCC------------------CC-cEEECCCCCEEEEEccccc
Confidence 36665 9999986 67999999874321 11111221 47 499999998 9999852
Q ss_pred -------CCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC-CCeEEEEECCCC
Q 011435 155 -------NLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG-NAALRQISLNQD 222 (486)
Q Consensus 155 -------n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-n~rIr~id~~G~ 222 (486)
.+.|.+||... +.+|.-+. +. ....-..|.++++..+...|||++.. .+.|.+||....
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~-g~--------r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPD-AP--------RFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETT-CC--------CCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCC-cc--------ccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 46799999877 34442110 00 00012368999854444479999975 789999998853
No 111
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.67 E-value=0.0018 Score=65.04 Aligned_cols=50 Identities=8% Similarity=-0.036 Sum_probs=34.6
Q ss_pred EEccCCcEEEEEecCcc---cCccceeEEEccCCe-EEEEECC-CCEEEEEcCCC
Q 011435 56 LQFENGYLVETVIEGNE---IGVVPYKIRVSEDGE-LFAVDEV-NSNIVKITPPL 105 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~---~~~~P~GlAVd~dG~-LYVaD~~-n~rI~kid~~g 105 (486)
++...+..+.++..+.. .+..|.+|++++||+ ||+++.. .+.|.+||.+.
T Consensus 86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 45555556655543221 135699999999997 9999875 67898888764
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.62 E-value=0.00035 Score=67.03 Aligned_cols=117 Identities=10% Similarity=-0.014 Sum_probs=78.5
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~n 155 (486)
+.|+++.+++.+|++...++.|.++|..+.. ....+... ....|.+++++++|+ +||++..+
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~---------------~~~~~~~~~~s~dg~~~~v~~~~~ 64 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVASDT--VYKSCVMP---------------DKFGPGTAMMAPDNRTAYVLNNHY 64 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTTTE--EEEEEECS---------------SCCSSCEEEECTTSSEEEEEETTT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCCCc--EEEEEecC---------------CCCCCceeEECCCCCEEEEEeCCC
Confidence 4688888899999999999999999986432 11111110 011488999999997 89999889
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCC-----------CCeEEEEECC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRG-----------NAALRQISLN 220 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~g-----------n~rIr~id~~ 220 (486)
+.|+++|..+ +.++..... ....-..|.++++ +++| .||+++.. ++.|..+++.
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~----------~~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSV----------PGEVGRSMYSFAI-SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCS----------TTEEEECSSCEEE-CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred CcEEEEeCCCCcEEEEEEcccc----------cccccccccceEE-CCCCCEEEEEcccccccccccccCCCeEEEEECC
Confidence 9999999765 233321100 0001134778874 5555 78888855 5799999986
Q ss_pred C
Q 011435 221 Q 221 (486)
Q Consensus 221 G 221 (486)
.
T Consensus 134 ~ 134 (349)
T 1jmx_B 134 D 134 (349)
T ss_dssp G
T ss_pred C
Confidence 4
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.61 E-value=0.0039 Score=62.14 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=75.7
Q ss_pred cceeEEEccCCe-EEEEEC-------CCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC
Q 011435 76 VPYKIRVSEDGE-LFAVDE-------VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN 147 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~-------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~ 147 (486)
.|.+++++++|+ ||++.. .++.|+.++..+.. .....+. -..|.+++++++|+
T Consensus 255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---~~~~~~~----------------~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK---LIDTIGP----------------PGNKRHIVSGNTEN 315 (433)
T ss_dssp EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---EEEEEEE----------------EECEEEEEECSSTT
T ss_pred CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc---EEeeccC----------------CCCcceEEECCCCC
Confidence 489999999986 777764 35688899876431 1111111 11578999999996
Q ss_pred -EEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCC-----------
Q 011435 148 -LYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGN----------- 211 (486)
Q Consensus 148 -LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn----------- 211 (486)
||++...+++|+.+|.++ +..+... ..|.+++ ..++| .||++...+
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-----------------~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIPVF-----------------DKPNTIA-LSPDGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-----------------SSEEEEE-ECTTSSEEEEEECCCCCTTTCTTSCC
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEecCC-----------------CCCCeEE-EcCCCCEEEEEecCCCcccccccccc
Confidence 999999999999999875 3333211 2366787 45556 588888764
Q ss_pred ---CeEEEEECCC
Q 011435 212 ---AALRQISLNQ 221 (486)
Q Consensus 212 ---~rIr~id~~G 221 (486)
+.|+.++...
T Consensus 378 ~~dg~v~~~d~~~ 390 (433)
T 3bws_A 378 LVLGKVYVIDTTT 390 (433)
T ss_dssp SSCCEEEEEETTT
T ss_pred ccceEEEEEECCC
Confidence 4899999864
No 114
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.60 E-value=0.00045 Score=69.48 Aligned_cols=93 Identities=13% Similarity=0.144 Sum_probs=63.7
Q ss_pred EEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEEC---------CCCEEEEEcCCCCcccccEEE-ecccCCccc
Q 011435 55 VLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDE---------VNSNIVKITPPLSQYSRGRLV-AGSFQGYTG 123 (486)
Q Consensus 55 vv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~---------~n~rI~kid~~g~~~~~~~~v-aG~~~G~~G 123 (486)
+++...+..+.++..|. .| +|++++||+ ||+++. ..+.|.+||..... ....+ .+. +.
T Consensus 35 v~D~~t~~~~~~i~~g~----~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--~~~~i~~~~--~~-- 103 (361)
T 2oiz_A 35 VYDYTNGKFLGMVPTAF----NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--FEKEISLPP--KR-- 103 (361)
T ss_dssp EEETTTCCEEEEEECCE----EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--EEEEEEECT--TB--
T ss_pred EEECCCCeEEEEecCCC----CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--EEEEEEcCc--cc--
Confidence 45666777777766553 48 999999997 999974 23569999976422 11111 221 00
Q ss_pred cCCCCccccccCCcceEEEcCCCC-EEEEeCC-CCEEEEEcCCC
Q 011435 124 HVDGKPNEARFNHPKGVTMDDKGN-LYVADTL-NLAIRKIGDAG 165 (486)
Q Consensus 124 ~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~-n~rIrkid~~G 165 (486)
...-..|.+|+++++|+ |||++.. .+.|.+||.+.
T Consensus 104 -------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 104 -------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp -------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred -------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 00124799999999998 9999875 68999999776
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.52 E-value=0.00095 Score=72.83 Aligned_cols=153 Identities=11% Similarity=0.063 Sum_probs=93.2
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEECCC--------------CEEEEEcCC--------CCc--c
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVN--------------SNIVKITPP--------LSQ--Y 108 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n--------------~rI~kid~~--------g~~--~ 108 (486)
++++.+...++.++.-|. +|.++++++||. +|++.... ..|.+++.. |.. .
T Consensus 178 tvID~~t~~v~~qI~Vgg----~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG----NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEETTTTEEEEEEEESS----CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred EEEECCCCeEEEEEEeCC----CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 456777777777776543 499999999988 88888765 335555431 110 0
Q ss_pred cccEEEecccCCccccCCCCc---cccccCCcceEEEcCCCC-EEEEeCCCCEEEEEcCCCce-EEcCCCCCCCCcCCCC
Q 011435 109 SRGRLVAGSFQGYTGHVDGKP---NEARFNHPKGVTMDDKGN-LYVADTLNLAIRKIGDAGVT-TIAGGKSNVAGFRDGP 183 (486)
Q Consensus 109 ~~~~~vaG~~~G~~G~~dG~~---~~a~Ln~P~GIavD~dG~-LYVAD~~n~rIrkid~~Gv~-tiaGg~~g~~G~~DG~ 183 (486)
+.+.++-+. .. .+.. .-..=..|.||.+++||. +||++...++|.+||.+... .+.|... ..+-.
T Consensus 254 ~~V~VID~~----~~--~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~----~~~~v 323 (595)
T 1fwx_A 254 NGVKVVDGR----KE--ASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD----PRSAV 323 (595)
T ss_dssp TTEEEEECS----GG--GCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC----GGGGE
T ss_pred CcEEEEeCc----cc--CCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC----cccce
Confidence 111111111 00 0111 000115899999999998 99999999999999977521 1111100 00000
Q ss_pred -ccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 184 -SEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 184 -~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
..-..=..|.+++ .+++|++|++..-++.|.+++.+.
T Consensus 324 ~~~v~vG~gP~h~a-F~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 324 VAEPELGLGPLHTA-FDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECCBCCSCEEEEE-ECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEEcCCCCCcceEE-ECCCCeEEEEEecCCcEEEEEhhH
Confidence 0000003589998 578889999999999999999875
No 116
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.51 E-value=0.002 Score=68.87 Aligned_cols=123 Identities=9% Similarity=0.032 Sum_probs=82.5
Q ss_pred ccceeEEEcc----CCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-E
Q 011435 75 VVPYKIRVSE----DGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-L 148 (486)
Q Consensus 75 ~~P~GlAVd~----dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-L 148 (486)
..|.+|++++ ||+ ||+++...+.|..+|..+.. ...++... +... ++... -.-..+.+|+++++|. +
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~--~~~~i~~~--g~~~--~~~~~-~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE--PKQIVSTR--GMTV--DTQTY-HPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC--EEEEEECC--EECS--SSCCE-ESCCCEEEEEECSSSSEE
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc--cceeeccc--Cccc--Ccccc-ccCCceEEEEECCCCCEE
Confidence 4599999999 987 89998878899999876432 12222221 0000 10000 0012577999999765 8
Q ss_pred EEEeCCCCEEEEEcCCC---c--eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCe-EEEEeCCCCeEEEEECCCC
Q 011435 149 YVADTLNLAIRKIGDAG---V--TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCS-LLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 149 YVAD~~n~rIrkid~~G---v--~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gn~rIr~id~~G~ 222 (486)
||+....+.|+.+|... + .++..+ ..|.+++ .+++|+ ||++....+.|.++|....
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l~~~~i~~~-----------------~~~~~~~-~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNLTVTSIGAA-----------------PFLHDGG-WDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSCEEEEEECC-----------------SSCCCEE-ECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred EEEECCCCeEEEEEecCCCcceeEEeccC-----------------cCccCce-ECCCCCEEEEEecCCCeEEEEECCCC
Confidence 99999999999998654 2 233211 2477887 567775 8999998999999998754
No 117
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.48 E-value=0.00066 Score=69.71 Aligned_cols=107 Identities=10% Similarity=-0.047 Sum_probs=71.6
Q ss_pred CeEEEEECCCC----EEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeC-------
Q 011435 86 GELFAVDEVNS----NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADT------- 153 (486)
Q Consensus 86 G~LYVaD~~n~----rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~------- 153 (486)
..+||++...+ +|.+||.++... ..++-.|. .| ||++++||. |||++.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v-~~~i~vG~------------------~P-~i~~spDg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVT-LGHSLGAF------------------LS-LAVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEE-EEEEEECT------------------TC-EEEECTTSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCccceEEEEECCCCeE-EEEEeCCC------------------CC-ceEECCCCCEEEEEccccccccc
Confidence 57999999887 899999875321 11122221 58 999999997 999984
Q ss_pred --CCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC-CCeEEE--EECCC
Q 011435 154 --LNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG-NAALRQ--ISLNQ 221 (486)
Q Consensus 154 --~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-n~rIr~--id~~G 221 (486)
..+.|.+||... +.+|..+... .+ .....|.++++..+...|||++.. ++.|.+ ||+..
T Consensus 92 G~~~~~VsviD~~T~~vv~~I~v~~~~--~~-------~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADIELPDAP--RF-------SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEEETTSC--SC-------CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCcc--cc-------ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 368899999876 4555321000 00 012468999854444489999976 677888 77753
No 118
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.37 E-value=0.0019 Score=68.32 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=83.2
Q ss_pred CCcEEEEEecCcccCccceeEEEccCCe--EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCc
Q 011435 60 NGYLVETVIEGNEIGVVPYKIRVSEDGE--LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHP 137 (486)
Q Consensus 60 ~G~~vetv~~G~~~~~~P~GlAVd~dG~--LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P 137 (486)
.|+.++++++| +..|.+|++++||. |||++. .++|++++.++... ...+++...- ...|. .......+
T Consensus 2 ~gf~v~~va~g---L~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~--~~~~~~~~~~---~~~g~-~~~~e~Gl 71 (463)
T 2wg3_C 2 NCFCIQEVVSG---LRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIF--KEPYLDIHKL---VQSGI-KGGDERGL 71 (463)
T ss_dssp CCEEEEEEEEE---ESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBC--SSCSEECTTT---BCCCC-SSSCCCSE
T ss_pred CceEEEEeccC---CCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCee--eeeecCCcce---eccCc-cccCCCcc
Confidence 46778888876 45799999999996 999997 57999998765321 1111221000 00000 00112356
Q ss_pred ceEEEcCC----CCEEEEeCCC------------CEEEEEcCCC----------ceEEcCCCCCCCCcCCCCccccccCC
Q 011435 138 KGVTMDDK----GNLYVADTLN------------LAIRKIGDAG----------VTTIAGGKSNVAGFRDGPSEDAKFSN 191 (486)
Q Consensus 138 ~GIavD~d----G~LYVAD~~n------------~rIrkid~~G----------v~tiaGg~~g~~G~~DG~~~~a~f~~ 191 (486)
.|||++++ |.|||+-+.. ++|.++.... ...|...... ..--.
T Consensus 72 lgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~-----------~~~H~ 140 (463)
T 2wg3_C 72 LSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL-----------HRKHL 140 (463)
T ss_dssp EEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES-----------SSSSC
T ss_pred eeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC-----------CCccc
Confidence 79999985 7899986421 4777775321 1222211000 00011
Q ss_pred CceeEEEcCCCeEEEEe--CC---------------CCeEEEEECCCC
Q 011435 192 DFDVVYVRPTCSLLVID--RG---------------NAALRQISLNQD 222 (486)
Q Consensus 192 P~gIa~vd~~G~LYVaD--~g---------------n~rIr~id~~G~ 222 (486)
-..|+ .+++|.|||+- .+ .+.|.||+++|.
T Consensus 141 g~~l~-fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~ 187 (463)
T 2wg3_C 141 GGQLL-FGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD 187 (463)
T ss_dssp EEEEE-ECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC
T ss_pred CCcEe-ECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC
Confidence 23466 68999999983 33 357999999984
No 119
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.35 E-value=0.0023 Score=67.74 Aligned_cols=159 Identities=11% Similarity=0.017 Sum_probs=89.8
Q ss_pred cEEEccCCcEEEEEecCcccCccceeEEE--ccCCe-EEEEEC-----CCCEEEEEcCCCCcccccEEEecccCCccccC
Q 011435 54 NVLQFENGYLVETVIEGNEIGVVPYKIRV--SEDGE-LFAVDE-----VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHV 125 (486)
Q Consensus 54 svv~~~~G~~vetv~~G~~~~~~P~GlAV--d~dG~-LYVaD~-----~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~ 125 (486)
.++++..+.++.++.-|.. +..|..|.+ +++|. +||+.. ..+.|.++..+.+.+....+ +..... ..
T Consensus 231 ~v~D~~~~k~~~tI~vg~~-g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v-Idi~~~---~v 305 (462)
T 2ece_A 231 HFWDLRKRKRIHSLTLGEE-NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV-IEIPAE---PL 305 (462)
T ss_dssp EEEETTTTEEEEEEESCTT-EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE-EEECCE---EC
T ss_pred EEEECCCCcEeeEEecCCC-CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE-EeCCCc---cc
Confidence 3467777777777665522 345888877 89987 899887 77788776654322111111 111000 00
Q ss_pred CCCcc------ccccCCcceEEEcCCCC-EEEEeCCCCEEEEEcCC--C----ceEEcCCCCC-CCCcCCCCccccccCC
Q 011435 126 DGKPN------EARFNHPKGVTMDDKGN-LYVADTLNLAIRKIGDA--G----VTTIAGGKSN-VAGFRDGPSEDAKFSN 191 (486)
Q Consensus 126 dG~~~------~a~Ln~P~GIavD~dG~-LYVAD~~n~rIrkid~~--G----v~tiaGg~~g-~~G~~DG~~~~a~f~~ 191 (486)
.+... .+.-+.|.+|.+++||+ |||++++.+.|.+||.. + +..+.-++.. ..-+.+|. .--..
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~---~~~gg 382 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGH---KLTGA 382 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSC---CCCSC
T ss_pred cccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccc---cCCCC
Confidence 01000 00024699999999998 99999999999999853 2 2222211000 00000000 01235
Q ss_pred CceeEEEcCCCeEEEEeC-------------CCCeEEEEECC
Q 011435 192 DFDVVYVRPTCSLLVIDR-------------GNAALRQISLN 220 (486)
Q Consensus 192 P~gIa~vd~~G~LYVaD~-------------gn~rIr~id~~ 220 (486)
|.++++..+...|||+++ .+..+.+++.+
T Consensus 383 Pr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd 424 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNAN 424 (462)
T ss_dssp CCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEEC
T ss_pred CCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEec
Confidence 999985444448999992 45667766555
No 120
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.33 E-value=0.0023 Score=65.16 Aligned_cols=108 Identities=12% Similarity=0.088 Sum_probs=68.6
Q ss_pred cCCe-EEEEEC-CCC---EEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCC---
Q 011435 84 EDGE-LFAVDE-VNS---NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTL--- 154 (486)
Q Consensus 84 ~dG~-LYVaD~-~n~---rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~--- 154 (486)
++|. +||+|. ..+ .|.+||.+... ++ +... .| ..| +|++++||+ |||++..
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~-----~~-~~i~--~g-----------~~p-~i~~spDg~~lyv~n~~~~~ 89 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGS-----IL-GHVN--GG-----------FLP-NPVAAHSGSEFALASTSFSR 89 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCe-----EE-EEec--CC-----------CCC-CeEECCCCCEEEEEeccccc
Confidence 4555 999997 444 88999986422 21 2211 11 158 999999998 9999852
Q ss_pred ------CCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC-CCeEEEEECCC
Q 011435 155 ------NLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG-NAALRQISLNQ 221 (486)
Q Consensus 155 ------n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-n~rIr~id~~G 221 (486)
.+.|.+||... +.++.-+... ....-..|.++++..+...|||++.. ++.|.+|| ..
T Consensus 90 ~~rg~~~~~v~viD~~t~~~~~~i~~~~~~---------~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 90 IAKGKRTDYVEVFDPVTFLPIADIELPDAP---------RFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred cccCCCCCeEEEEECCCCcEEEEEECCCcc---------ccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence 46789999865 2333211000 00001358889854445579999975 68999999 64
No 121
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.30 E-value=0.00012 Score=79.98 Aligned_cols=140 Identities=15% Similarity=0.177 Sum_probs=90.1
Q ss_pred CcEEEccC--CcE-EEEEecCcccCccceeEEEccCCe-EEEEECCCCEEEEEcCCCCcc-------cccEEEecccCCc
Q 011435 53 GNVLQFEN--GYL-VETVIEGNEIGVVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQY-------SRGRLVAGSFQGY 121 (486)
Q Consensus 53 gsvv~~~~--G~~-vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~-------~~~~~vaG~~~G~ 121 (486)
.+|++... +.. +.++..|. +|+|+.+++||. +||++...+.|.+|+.+.... -...+++ .. .
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~----~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~-~v--~ 328 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIAN----NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA-EP--E 328 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEES----SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE-CC--B
T ss_pred EEEEeCcccCCceeEEEEecCC----CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE-Ec--C
Confidence 34566655 444 44554443 599999999998 999999999999999762100 0000111 11 0
Q ss_pred cccCCCCccccccCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC-------------ceEEcCCCCCCCCcCCCCccccc
Q 011435 122 TGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG-------------VTTIAGGKSNVAGFRDGPSEDAK 188 (486)
Q Consensus 122 ~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G-------------v~tiaGg~~g~~G~~DG~~~~a~ 188 (486)
-| ..|.++++|++|++|++....+.|.++|.+. +.++..+ |.. ..
T Consensus 329 vG-----------~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~------yqp-----Gh 386 (595)
T 1fwx_A 329 LG-----------LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH------YQP-----GH 386 (595)
T ss_dssp CC-----------SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS------SCE-----EE
T ss_pred CC-----------CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc------ccc-----cc
Confidence 11 2699999999999999999999999998543 2222221 111 11
Q ss_pred cCCCceeEEEcCCC-eEEEEeCCC-CeE-----------EEEECCCC
Q 011435 189 FSNDFDVVYVRPTC-SLLVIDRGN-AAL-----------RQISLNQD 222 (486)
Q Consensus 189 f~~P~gIa~vd~~G-~LYVaD~gn-~rI-----------r~id~~G~ 222 (486)
.....+++ ..++| .||+++... .|+ +.|+..|+
T Consensus 387 ~~~~~g~t-~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 387 LKTVMGET-LDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp EEETTTTS-TTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred ceeccceE-eCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 22334555 34555 899999987 777 77887653
No 122
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.19 E-value=0.0074 Score=61.90 Aligned_cols=117 Identities=20% Similarity=0.278 Sum_probs=72.9
Q ss_pred ccceeEEE--cc-CCe--EEEEECCCCEEEEEcC--CCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CC
Q 011435 75 VVPYKIRV--SE-DGE--LFAVDEVNSNIVKITP--PLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KG 146 (486)
Q Consensus 75 ~~P~GlAV--d~-dG~--LYVaD~~n~rI~kid~--~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG 146 (486)
..|+||++ ++ .|. +||++.. +++..+.. .+... ....++.++. .| ..|.|+++|+ .|
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~-~~~~lVR~f~------lg-------sq~EgcvvDd~~g 192 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGY-ISGKKVRAFK------MN-------SQTEGMAADDEYG 192 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSC-EEEEEEEEEE------CS-------SCEEEEEEETTTT
T ss_pred CCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCc-ccceEEEEec------CC-------CCcceEEEcCCCC
Confidence 67999999 76 454 7777765 67766443 11100 0111222110 00 1699999997 67
Q ss_pred CEEEEeCCCCEEEEEcCC--C---ceEE--cCCCCCCCCcCCCCccccccC-CCceeEEE-cCC--CeEEEEeCCCCeEE
Q 011435 147 NLYVADTLNLAIRKIGDA--G---VTTI--AGGKSNVAGFRDGPSEDAKFS-NDFDVVYV-RPT--CSLLVIDRGNAALR 215 (486)
Q Consensus 147 ~LYVAD~~n~rIrkid~~--G---v~ti--aGg~~g~~G~~DG~~~~a~f~-~P~gIa~v-d~~--G~LYVaD~gn~rIr 215 (486)
.|||++... .|++|+.+ + -+.+ .+. ..|. .+.||++. ..+ |.|++++.+++...
T Consensus 193 ~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~--------------g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 193 RLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADG--------------RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp EEEEEETTT-EEEEEECSTTSCSCCEEEEEBSS--------------SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred eEEEecccc-eEEEEeCCcCCCCCceEEEEecC--------------CccccCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence 799999974 59999944 3 1122 221 1122 47788864 332 57999999999999
Q ss_pred EEECCC
Q 011435 216 QISLNQ 221 (486)
Q Consensus 216 ~id~~G 221 (486)
+|+..+
T Consensus 258 Vydr~~ 263 (355)
T 3amr_A 258 IYDRQG 263 (355)
T ss_dssp EEESST
T ss_pred EEECCC
Confidence 999874
No 123
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.11 E-value=0.0091 Score=63.25 Aligned_cols=148 Identities=13% Similarity=-0.051 Sum_probs=84.5
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCe-EEEEEC------------------CCCEEEEEcCCCCcccccEEEec
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGE-LFAVDE------------------VNSNIVKITPPLSQYSRGRLVAG 116 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~-LYVaD~------------------~n~rI~kid~~g~~~~~~~~vaG 116 (486)
++...+.++.++..+......++++.+.++++ +|++++ ..++|..++.+.... ..++-+|
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~-~~tI~vg 247 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR-IHSLTLG 247 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE-EEEEESC
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE-eeEEecC
Confidence 33344566665553322223467788899988 566653 378999999874310 0111122
Q ss_pred ccCCccccCCCCccccccCCcceEEE--cCCCC-EEEEeC-----CCCEEEEEcCC-C----ceEEcCCCCC-CCCcCC-
Q 011435 117 SFQGYTGHVDGKPNEARFNHPKGVTM--DDKGN-LYVADT-----LNLAIRKIGDA-G----VTTIAGGKSN-VAGFRD- 181 (486)
Q Consensus 117 ~~~G~~G~~dG~~~~a~Ln~P~GIav--D~dG~-LYVAD~-----~n~rIrkid~~-G----v~tiaGg~~g-~~G~~D- 181 (486)
. .| ..|.+|.+ +++|. +||+.. .++.|.++..+ | +.+|- .... ..+-..
T Consensus 248 ~----~g-----------~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId-i~~~~v~~~lp~ 311 (462)
T 2ece_A 248 E----EN-----------RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE-IPAEPLEGNLPE 311 (462)
T ss_dssp T----TE-----------EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE-ECCEECCSSCCG
T ss_pred C----CC-----------CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe-CCCccccccccc
Confidence 1 11 15888877 99998 899987 77788765432 3 12211 0000 000000
Q ss_pred CCc-cccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 182 GPS-EDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 182 G~~-~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
.+. ..+.-..|.+|.+..++..|||++++.+.|.+|+..
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 000 000024689998655555899999999999999985
No 124
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.09 E-value=0.0056 Score=59.27 Aligned_cols=108 Identities=23% Similarity=0.351 Sum_probs=69.1
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCc---ccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEe
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQ---YSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVAD 152 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~---~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 152 (486)
.-..||++|||.||.+ .++.++++++.... +....+.+|+ .|. ..| ..|.+|++|+||++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~----~Gw-------~~F---~a~~fD~~G~LYav- 104 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN----GGW-------NQF---QFLFFDPNGYLYAV- 104 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC----SCG-------GGC---SEEEECTTSCEEEE-
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecc----ccc-------ccc---eEEEECCCCCEEEe-
Confidence 4579999999999999 56789999985321 0011233442 121 112 38999999999999
Q ss_pred CCCCEEEEEcC--CC----c--eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEE
Q 011435 153 TLNLAIRKIGD--AG----V--TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIS 218 (486)
Q Consensus 153 ~~n~rIrkid~--~G----v--~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id 218 (486)
.++.|+|+++ ++ + .+..|. .||.+ | ..| +.+++|.||.++ ++++.+-.
T Consensus 105 -~dG~iyr~~pP~~~~~~Wl~~a~~vg~----~gw~~-------~---~~l-ff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 105 -SKDKLYKASPPQSDTDNWIARATEVGS----GGWSG-------F---KFL-FFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp -ETTEEEEESCCCSTTCCHHHHSEEEEC----SSGGG-------E---EEE-EECTTSCEEEEE--TTEEEEEC
T ss_pred -CCCEEEEeCCCcCCCCceeccccEecc----CCCCc-------e---EEE-EECCCceEEEEe--CCcEEecC
Confidence 3499999987 44 1 122221 12222 1 234 589999999999 55565543
No 125
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.07 E-value=0.0033 Score=68.02 Aligned_cols=103 Identities=12% Similarity=-0.018 Sum_probs=73.4
Q ss_pred EccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCCCCEEEE
Q 011435 82 VSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTLNLAIRK 160 (486)
Q Consensus 82 Vd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~n~rIrk 160 (486)
.|+++.+||+....+.|.+||.++.. +...+.. | ..|.++++++||+ |||++. .+.|.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~---v~~~i~~-----g-----------~~p~~v~~SpDGr~lyv~~~-dg~V~v 222 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYE---IKTVLDT-----G-----------YAVHISRLSASGRYLFVIGR-DGKVNM 222 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCC---EEEEEEC-----S-----------SCEEEEEECTTSCEEEEEET-TSEEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCe---EEEEEeC-----C-----------CCccceEECCCCCEEEEEcC-CCeEEE
Confidence 44556799999999999999987532 1111110 1 1588999999998 899985 579999
Q ss_pred EcCC--C---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEc---CCC-eEEEEeCCCCeEEEEECCC
Q 011435 161 IGDA--G---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVR---PTC-SLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 161 id~~--G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd---~~G-~LYVaD~gn~rIr~id~~G 221 (486)
||.. . +.++..+ ..|.++++.. ++| .|||++...+.|..||...
T Consensus 223 iD~~~~t~~~v~~i~~G-----------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKIG-----------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EETTSSSCCEEEEEECC-----------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred EECCCCCCcEeEEEecC-----------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 9984 2 3444322 1378898542 345 8999999999999998654
No 126
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.01 E-value=0.016 Score=54.93 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=52.1
Q ss_pred CcceEEEcCCCC-EEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeC-
Q 011435 136 HPKGVTMDDKGN-LYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDR- 209 (486)
Q Consensus 136 ~P~GIavD~dG~-LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~- 209 (486)
.|.+++++++|+ |||++..++.|+++|... +.++.....+ ..-..|.+++ ++++| .||+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-~s~dg~~l~~~~~~ 102 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE-----------ERVKSLFGAA-LSPDGKTLAIYESP 102 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT-----------EEEECTTCEE-ECTTSSEEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc-----------cccccccceE-ECCCCCEEEEEecc
Confidence 488999999996 899999889999999755 3334321000 0012477887 46666 7999863
Q ss_pred ----------CCCeEEEEECCCC
Q 011435 210 ----------GNAALRQISLNQD 222 (486)
Q Consensus 210 ----------gn~rIr~id~~G~ 222 (486)
.++.|++++....
T Consensus 103 ~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 103 VRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp EEECSSCEEECCCEEEEEETTTT
T ss_pred cccccccccccCceEEEEECCCC
Confidence 3588999998753
No 127
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.97 E-value=0.0052 Score=67.08 Aligned_cols=122 Identities=20% Similarity=0.209 Sum_probs=74.8
Q ss_pred ccCccceeEEEcc-CCeEEEEECCC---------------------CEEEEEcCCCCcc------cccEEEecccCCccc
Q 011435 72 EIGVVPYKIRVSE-DGELFAVDEVN---------------------SNIVKITPPLSQY------SRGRLVAGSFQGYTG 123 (486)
Q Consensus 72 ~~~~~P~GlAVd~-dG~LYVaD~~n---------------------~rI~kid~~g~~~------~~~~~vaG~~~G~~G 123 (486)
..+..|+|+++++ +|.|||+-+.+ +.|+++.+++... ....+++|......+
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 3347899999996 89999997643 5799997653211 112234443211110
Q ss_pred ----cCCCCccccccCCcceEEEcCCCCEEEEeCC------------CCEEEEEcCC-C-ceEEcCCCCCCCCcCCCCcc
Q 011435 124 ----HVDGKPNEARFNHPKGVTMDDKGNLYVADTL------------NLAIRKIGDA-G-VTTIAGGKSNVAGFRDGPSE 185 (486)
Q Consensus 124 ----~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~------------n~rIrkid~~-G-v~tiaGg~~g~~G~~DG~~~ 185 (486)
..........|+.|.+|++|+.|+|||+.-+ |+.++.+++. | +..|+-+..+
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---------- 530 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---------- 530 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT----------
T ss_pred cccccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC----------
Confidence 0011113456999999999999999998643 5678888765 3 7777653211
Q ss_pred ccccCCCceeEEEcCCCeEEEE
Q 011435 186 DAKFSNDFDVVYVRPTCSLLVI 207 (486)
Q Consensus 186 ~a~f~~P~gIa~vd~~G~LYVa 207 (486)
....|+++.++...|||.
T Consensus 531 ----aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 ----CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp ----CEEEEEEECTTSSEEEEE
T ss_pred ----ccCcCeeECCCCCEEEEE
Confidence 123577765544567765
No 128
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.89 E-value=0.036 Score=56.84 Aligned_cols=128 Identities=15% Similarity=0.150 Sum_probs=78.2
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccC----C----eEEEEECC--CCEEEEE--cCCCCcccccEEEecccCCccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSED----G----ELFAVDEV--NSNIVKI--TPPLSQYSRGRLVAGSFQGYTG 123 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~d----G----~LYVaD~~--n~rI~ki--d~~g~~~~~~~~vaG~~~G~~G 123 (486)
+++ +|..+..+..| .+++|.+-++ | -+|++|.. +++|..| +++.. .... ++...
T Consensus 55 ydl-~G~~l~~~~~g-----~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~---~l~~-i~~~~---- 120 (355)
T 3amr_A 55 YSL-DGKMLHSYNTG-----KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG---TLQS-MTDPD---- 120 (355)
T ss_dssp EET-TSCEEEEECCS-----CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC---CEEE-CSCTT----
T ss_pred EcC-CCcEEEEccCC-----CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC---ceee-ccccc----
Confidence 444 67777766543 2566666542 2 25899988 8988777 54422 1222 22100
Q ss_pred cCCCCccccccCCcceEEE--cCC-CC--EEEEeCCCCEEEEEc----CCC------ceEEcCCCCCCCCcCCCCccccc
Q 011435 124 HVDGKPNEARFNHPKGVTM--DDK-GN--LYVADTLNLAIRKIG----DAG------VTTIAGGKSNVAGFRDGPSEDAK 188 (486)
Q Consensus 124 ~~dG~~~~a~Ln~P~GIav--D~d-G~--LYVAD~~n~rIrkid----~~G------v~tiaGg~~g~~G~~DG~~~~a~ 188 (486)
......+..|.|||+ ++. |. +||.+.. +++..+. .+| +.++..+
T Consensus 121 ----~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lg---------------- 179 (355)
T 3amr_A 121 ----HPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMN---------------- 179 (355)
T ss_dssp ----SCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECS----------------
T ss_pred ----cCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCC----------------
Confidence 000123578999999 874 54 7888875 7776643 233 2333221
Q ss_pred cCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 189 FSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 189 f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
..|.++++.+..|.|||++...+ ||+|+.+
T Consensus 180 -sq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~ 209 (355)
T 3amr_A 180 -SQTEGMAADDEYGRLYIAEEDEA-IWKFSAE 209 (355)
T ss_dssp -SCEEEEEEETTTTEEEEEETTTE-EEEEECS
T ss_pred -CCcceEEEcCCCCeEEEecccce-EEEEeCC
Confidence 24678887778899999999855 9999966
No 129
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.89 E-value=0.011 Score=56.64 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=46.7
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCe
Q 011435 136 HPKGVTMDDKGNLYVADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAA 213 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~r 213 (486)
....+++|++|+|||+.. ++.|.+++.+| +..+.... ..+..++ ++.+|+|||+.. ++.
T Consensus 216 ~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~----------------~~~~~~~-~~~~g~l~v~t~-~gg 276 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTGK----------------RIESSPV-IGNTDTIYFGSY-DGH 276 (330)
T ss_dssp CCSCCEECTTSCEEEEET-TTEEEEECTTSCEEEEEECSS----------------CCCSCCE-ECTTSCEEEECT-TCE
T ss_pred ceeceEECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCCC----------------Cccccce-EcCCCeEEEecC-CCC
Confidence 467889999999999975 56888998877 33332110 0122344 677899999875 457
Q ss_pred EEEEECCCC
Q 011435 214 LRQISLNQD 222 (486)
Q Consensus 214 Ir~id~~G~ 222 (486)
|.+++.+|.
T Consensus 277 l~~~d~~g~ 285 (330)
T 3hxj_A 277 LYAINPDGT 285 (330)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCc
Confidence 888987664
No 130
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.78 E-value=0.0062 Score=60.63 Aligned_cols=105 Identities=11% Similarity=0.156 Sum_probs=65.6
Q ss_pred EEEccCC-eEEEEE---CCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCC-CEEEEeCC
Q 011435 80 IRVSEDG-ELFAVD---EVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG-NLYVADTL 154 (486)
Q Consensus 80 lAVd~dG-~LYVaD---~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG-~LYVAD~~ 154 (486)
.++..+| .||++| ..+..|++++.+|+. .+.+.... . ++++.+| .||++|.+
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~---~~~lt~~~---------------~-----~~~~~~g~~iy~t~~g 165 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE---KKKIKNHY---------------L-----FTCNTSDRYFYYNNPK 165 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC---CEEEESSC---------------C-----CCSEEETTEEEEECTT
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC---eEEEeCCC---------------c-----eEeeEECCEEEEEeCC
Confidence 3455544 599999 678899999999753 33343310 0 2234444 49999888
Q ss_pred CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC-CeEEEEECCCCceee
Q 011435 155 NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN-AALRQISLNQDDCEY 226 (486)
Q Consensus 155 n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn-~rIr~id~~G~~~~~ 226 (486)
..+|.+++.+| ..++..+ +..+++++..+.||.++..+ .+|.+++++|.....
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~~-------------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~ 221 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYDC-------------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV 221 (302)
T ss_dssp TCCEEEEETTTTEEEEEECS-------------------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE
T ss_pred CceEEEEECCCCCEEEEeCC-------------------CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE
Confidence 88999999887 3444321 11122234567788888653 578888888754433
No 131
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.70 E-value=0.016 Score=63.04 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=59.3
Q ss_pred ccccCCcceEEEcC-CCCEEEEeCCC---------------------CEEEEEcCCC-----------ceEEcCCCCCCC
Q 011435 131 EARFNHPKGVTMDD-KGNLYVADTLN---------------------LAIRKIGDAG-----------VTTIAGGKSNVA 177 (486)
Q Consensus 131 ~a~Ln~P~GIavD~-dG~LYVAD~~n---------------------~rIrkid~~G-----------v~tiaGg~~g~~ 177 (486)
...|.+|.+|++++ +|.||||=++| ++|+++..++ +..++|......
T Consensus 380 AT~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~ 459 (592)
T 4a9v_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred CccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccc
Confidence 45688999999998 88999997653 6788886432 122333211111
Q ss_pred -C-cC--CCCccccccCCCceeEEEcCCCeEEE-EeCC-----------CCeEEEEECC
Q 011435 178 -G-FR--DGPSEDAKFSNDFDVVYVRPTCSLLV-IDRG-----------NAALRQISLN 220 (486)
Q Consensus 178 -G-~~--DG~~~~a~f~~P~gIa~vd~~G~LYV-aD~g-----------n~rIr~id~~ 220 (486)
+ |. .+......|+.|++|+ ++++|+||| +|.. ++.|.+++++
T Consensus 460 ~~~~~g~~~~~~~~~fnsPDnL~-fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~ 517 (592)
T 4a9v_A 460 GTPKGGSSNITPQNMFNSPDGLG-FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA 517 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEE-ECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT
T ss_pred cccccCccCccccCccCCCCceE-ECCCCCEEEEeCCCcCccccccccCCceEEEEeCC
Confidence 0 11 1122345799999998 799999999 7863 5578888874
No 132
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.64 E-value=0.03 Score=55.63 Aligned_cols=62 Identities=13% Similarity=0.102 Sum_probs=42.4
Q ss_pred EEcCCCC-EEEE-eCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEE
Q 011435 141 TMDDKGN-LYVA-DTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQ 216 (486)
Q Consensus 141 avD~dG~-LYVA-D~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~ 216 (486)
.++++|. ||.+ |...+.|.+++.+| ..++..+ ....+.+ .++.||++|..++.|.+
T Consensus 229 ~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~------------------~~~~i~i--~~d~Iy~td~~~~~i~~ 288 (302)
T 3s25_A 229 HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG------------------EFCNINV--TSQYVYFTDFVSNKEYC 288 (302)
T ss_dssp EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES------------------CEEEEEE--CSSEEEEEETTTCCEEE
T ss_pred eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC------------------ccceEEE--eCCEEEEEECCCCeEEE
Confidence 3566555 7776 55567888888888 3444321 0124542 56789999998888999
Q ss_pred EECCCC
Q 011435 217 ISLNQD 222 (486)
Q Consensus 217 id~~G~ 222 (486)
+.++|.
T Consensus 289 ~~~dGs 294 (302)
T 3s25_A 289 TSTQNP 294 (302)
T ss_dssp EESSSC
T ss_pred EECCCC
Confidence 999885
No 133
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.60 E-value=0.046 Score=57.73 Aligned_cols=119 Identities=13% Similarity=0.125 Sum_probs=67.3
Q ss_pred cceeEEEccC----CeEEEEECCC------------CEEEEEcCCCC---c--ccccEEEecccCCccccCCCCcccccc
Q 011435 76 VPYKIRVSED----GELFAVDEVN------------SNIVKITPPLS---Q--YSRGRLVAGSFQGYTGHVDGKPNEARF 134 (486)
Q Consensus 76 ~P~GlAVd~d----G~LYVaD~~n------------~rI~kid~~g~---~--~~~~~~vaG~~~G~~G~~dG~~~~a~L 134 (486)
.+.|||++++ |.|||+-+.. ++|.|+..+.. . ....+++....... .-
T Consensus 70 Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~-----------~~ 138 (463)
T 2wg3_C 70 GLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH-----------RK 138 (463)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS-----------SS
T ss_pred cceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC-----------Cc
Confidence 3678999985 8899985421 47888876421 1 11233443321111 11
Q ss_pred CCcceEEEcCCCCEEEE--eCC---------------CCEEEEEcCCCce-----EEcCCCCCCCCcCCCC-----cccc
Q 011435 135 NHPKGVTMDDKGNLYVA--DTL---------------NLAIRKIGDAGVT-----TIAGGKSNVAGFRDGP-----SEDA 187 (486)
Q Consensus 135 n~P~GIavD~dG~LYVA--D~~---------------n~rIrkid~~Gv~-----tiaGg~~g~~G~~DG~-----~~~a 187 (486)
..-..|++++||.|||+ |.. .+.|.||+++|-. .|..... |.+.. .-..
T Consensus 139 H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNP----f~~~~~~~~eI~a~ 214 (463)
T 2wg3_C 139 HLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNP----HFNSTNQPPEVFAH 214 (463)
T ss_dssp SCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTST----TTTCSSSCTTEEEE
T ss_pred ccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCC----CcCCCCCcccEEEE
Confidence 23468999999999999 332 3579999988721 2211100 11110 0111
Q ss_pred ccCCCceeEEEcCC----C--eEEEEeC
Q 011435 188 KFSNDFDVVYVRPT----C--SLLVIDR 209 (486)
Q Consensus 188 ~f~~P~gIa~vd~~----G--~LYVaD~ 209 (486)
-+.+|.++++...+ | .||++|.
T Consensus 215 G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 215 GLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp CCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred CCCCcceEEECCCCCCcccceEEEeccc
Confidence 36689999954433 4 6788886
No 134
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.47 E-value=0.31 Score=50.30 Aligned_cols=147 Identities=9% Similarity=0.105 Sum_probs=89.3
Q ss_pred EEccCC--cEEEEEecCccc---CccceeEEEc-c-------CCeEEEEECCCCEEEEEcCCCCcccccEEEecc-cCC-
Q 011435 56 LQFENG--YLVETVIEGNEI---GVVPYKIRVS-E-------DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGS-FQG- 120 (486)
Q Consensus 56 v~~~~G--~~vetv~~G~~~---~~~P~GlAVd-~-------dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~-~~G- 120 (486)
+++..+ .++.++.=.... ...-.+|+|| . ++.+||+|.....|+++|..... ...+... ..-
T Consensus 128 ~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~---swRv~~~~~~pd 204 (381)
T 3q6k_A 128 YDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQD---SWNVTHPTFKAE 204 (381)
T ss_dssp EESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTE---EEEEECGGGSCC
T ss_pred EECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCc---EEEEccCCCccc
Confidence 677777 777666432111 2345789999 2 45699999999999999987543 2222221 100
Q ss_pred ccc--cCCCCccccccCCcceEEEcCC----CC-EEEEeCCCCEEEEEcCC----C-----ceEEcCCCCCCCCcCCCCc
Q 011435 121 YTG--HVDGKPNEARFNHPKGVTMDDK----GN-LYVADTLNLAIRKIGDA----G-----VTTIAGGKSNVAGFRDGPS 184 (486)
Q Consensus 121 ~~G--~~dG~~~~a~Ln~P~GIavD~d----G~-LYVAD~~n~rIrkid~~----G-----v~tiaGg~~g~~G~~DG~~ 184 (486)
..+ ..+|..- .....-.|||++++ +. ||+.-....++.++... . +..+ |.. | +
T Consensus 205 ~~~~~~i~G~~~-~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~k----g----~- 273 (381)
T 3q6k_A 205 RPTKFDYGGKEY-EFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNR----G----K- 273 (381)
T ss_dssp SCEEEEETTEEE-EECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EEC----C----T-
T ss_pred cCcceEECCEEe-EeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eec----C----C-
Confidence 000 0011100 01135679999986 44 99999988899998621 1 3332 210 0 0
Q ss_pred cccccCCCceeEEEc-CCCeEEEEeCCCCeEEEEECCC
Q 011435 185 EDAKFSNDFDVVYVR-PTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 185 ~~a~f~~P~gIa~vd-~~G~LYVaD~gn~rIr~id~~G 221 (486)
.+...+++ .| .+|+||+++..++.|.+++.++
T Consensus 274 ----~s~~~~~~-~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 274 ----YNDAIALA-YDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp ----TCCEEEEE-ECTTTCEEEEEESSSSEEEEEETTS
T ss_pred ----CCCcceEE-EeCCCCeEEEEeccCCeEEEEeCCC
Confidence 01112344 54 8999999999999999999986
No 135
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.32 E-value=0.035 Score=57.45 Aligned_cols=106 Identities=10% Similarity=0.211 Sum_probs=72.9
Q ss_pred cceeEEEccC----C-eEEEEECCCCEEEEEcCC----CCcccccEEEecccCCccccCCCCccccccCCcceEEEc-CC
Q 011435 76 VPYKIRVSED----G-ELFAVDEVNSNIVKITPP----LSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMD-DK 145 (486)
Q Consensus 76 ~P~GlAVd~d----G-~LYVaD~~n~rI~kid~~----g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD-~d 145 (486)
.-.|||++++ + .||+.-....++++|... ......++ ..|. .| ......++++| .+
T Consensus 221 Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~-~~G~----kg---------~~s~~~~~~~D~~~ 286 (381)
T 3q6k_A 221 GIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPE-LLGN----RG---------KYNDAIALAYDPKT 286 (381)
T ss_dssp CEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCE-EEEE----CC---------TTCCEEEEEECTTT
T ss_pred CceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceE-Eeee----cC---------CCCCcceEEEeCCC
Confidence 3578999876 4 499998888899999632 11111122 2222 01 01133478897 79
Q ss_pred CCEEEEeCCCCEEEEEcCCC-------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC
Q 011435 146 GNLYVADTLNLAIRKIGDAG-------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG 210 (486)
Q Consensus 146 G~LYVAD~~n~rIrkid~~G-------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g 210 (486)
|+||+++...++|.+.++++ +.+++- +.+|..|.++. ++.+|.|||....
T Consensus 287 G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~--------------d~~l~~pd~~~-i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 287 KVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT--------------SSRFVFGTDIS-VDSKGGLWFMSNG 343 (381)
T ss_dssp CEEEEEESSSSEEEEEETTSCSBCGGGEEEEEE--------------CTTCCSEEEEE-ECTTSCEEEEECS
T ss_pred CeEEEEeccCCeEEEEeCCCCccccCceEEEEE--------------CCCccccCeEE-ECCCCeEEEEECc
Confidence 99999999999999999875 244443 23688999997 7889999998844
No 136
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.23 E-value=0.039 Score=52.60 Aligned_cols=104 Identities=14% Similarity=0.198 Sum_probs=64.7
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCE
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLA 157 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~r 157 (486)
..++++++|.|||+.. ++.|++++.++.. ....... -.....+++|.+|+|||+. +.
T Consensus 140 ~~~~~~~~g~l~vgt~-~~~l~~~d~~g~~---~~~~~~~----------------~~~~~~~~~d~~g~l~v~t---~~ 196 (330)
T 3hxj_A 140 ATPIVSEDGTIYVGSN-DNYLYAINPDGTE---KWRFKTN----------------DAITSAASIGKDGTIYFGS---DK 196 (330)
T ss_dssp SCCEECTTSCEEEECT-TSEEEEECTTSCE---EEEEECS----------------SCCCSCCEECTTCCEEEES---SS
T ss_pred eeeEEcCCCEEEEEcC-CCEEEEECCCCCE---eEEEecC----------------CCceeeeEEcCCCEEEEEe---CE
Confidence 4567777788888653 4678888876321 1111100 1134567899999999998 78
Q ss_pred EEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 158 IRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 158 Irkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
|.++|.+| +..+... -.....++ .+.+|.|||+.. ++.|.+++.+|.
T Consensus 197 l~~~d~~g~~~~~~~~~----------------~~~~~~~~-~~~~g~l~v~t~-~~gl~~~~~~g~ 245 (330)
T 3hxj_A 197 VYAINPDGTEKWNFYAG----------------YWTVTRPA-ISEDGTIYVTSL-DGHLYAINPDGT 245 (330)
T ss_dssp EEEECTTSCEEEEECCS----------------SCCCSCCE-ECTTSCEEEEET-TTEEEEECTTSC
T ss_pred EEEECCCCcEEEEEccC----------------CcceeceE-ECCCCeEEEEcC-CCeEEEECCCCC
Confidence 99999777 2222111 01234555 678889999875 456778877665
No 137
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.04 E-value=0.071 Score=51.54 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=67.6
Q ss_pred cCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC--------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEE
Q 011435 134 FNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG--------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLL 205 (486)
Q Consensus 134 Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G--------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LY 205 (486)
+.+-..|+++++|.||++ .++.++++++.. ..+..|. .|+. . ++-+++|++|.||
T Consensus 40 w~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~----~Gw~----------~-F~a~~fD~~G~LY 102 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN----GGWN----------Q-FQFLFFDPNGYLY 102 (236)
T ss_dssp CTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC----SCGG----------G-CSEEEECTTSCEE
T ss_pred cccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecc----cccc----------c-ceEEEECCCCCEE
Confidence 456679999999999999 567899999732 2222222 1221 1 3445789999999
Q ss_pred EEeCCCCeEEEEECCCCceeecccCCCCcceEEEEeeeeecceEeeeccCCcceEEee
Q 011435 206 VIDRGNAALRQISLNQDDCEYQYNSISPTDILMVVGAVLVGYVTCMLQQGFGPFFFSR 263 (486)
Q Consensus 206 VaD~gn~rIr~id~~G~~~~~~~~~~~~~~i~t~~g~~~~Gy~l~l~~~~~g~~~~a~ 263 (486)
++ .+++|.|++..... +.+.+.-.+.+|..-...--++..+..|.++...
T Consensus 103 av--~dG~iyr~~pP~~~------~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 103 AV--SKDKLYKASPPQSD------TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp EE--ETTEEEEESCCCST------TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred Ee--CCCEEEEeCCCcCC------CCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 99 44899999874321 1122222445555333444666677888888777
No 138
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.89 E-value=0.13 Score=56.16 Aligned_cols=79 Identities=19% Similarity=0.269 Sum_probs=51.8
Q ss_pred ccccCCcceEEEcC-CCCEEEEeCCC---------------------CEEEEEcCCC-----------ceEEcCCCCCCC
Q 011435 131 EARFNHPKGVTMDD-KGNLYVADTLN---------------------LAIRKIGDAG-----------VTTIAGGKSNVA 177 (486)
Q Consensus 131 ~a~Ln~P~GIavD~-dG~LYVAD~~n---------------------~rIrkid~~G-----------v~tiaGg~~g~~ 177 (486)
...|.+|.||++++ +|.||||-+.+ ++|+++++++ +..++|......
T Consensus 380 AT~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~ 459 (592)
T 3zwu_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred eEEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccc
Confidence 45699999999997 88999998753 4688886532 112222211100
Q ss_pred C-cC---CCCccccccCCCceeEEEcCCCeEEEEeCC
Q 011435 178 G-FR---DGPSEDAKFSNDFDVVYVRPTCSLLVIDRG 210 (486)
Q Consensus 178 G-~~---DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g 210 (486)
+ .. ........|+.|-+|+ +++.|+|||++-+
T Consensus 460 ~~~~~~~~~~~~~~~f~~PDNL~-fd~~G~LwI~eDg 495 (592)
T 3zwu_A 460 GTPKGGSSNITPQNMFNSPDGLG-FDKAGRLWILTDG 495 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEE-ECTTCCEEEEECC
T ss_pred ccccccccccCCCCCccCCcceE-ECCCCCEEEEecC
Confidence 0 00 1123345699999998 7899999999764
No 139
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.84 E-value=0.51 Score=48.60 Aligned_cols=110 Identities=13% Similarity=0.173 Sum_probs=75.1
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-.++++.+|+.++++-..++.|..++.++.. ...+.+. -.....|+++++|.++++=..++
T Consensus 429 v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~---~~~~~~~----------------~~~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 429 VWGVAFSPDDQTIASASDDKTVKLWNRNGQL---LQTLTGH----------------SSSVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTSCE---EEEEECC----------------SSCEEEEEECTTSCEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCE---EEEEcCC----------------CCCEEEEEEcCCCCEEEEEeCCC
Confidence 4678999999877776777888888876432 2233331 11356899999999777666678
Q ss_pred EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.|+.+|.+| +.++.+.. .....++ ..++|.++++-..++.|+.++.+|.
T Consensus 490 ~i~iw~~~~~~~~~~~~h~----------------~~v~~l~-~s~dg~~l~s~~~dg~v~lwd~~~~ 540 (577)
T 2ymu_A 490 TVKLWNRNGQLLQTLTGHS----------------SSVRGVA-FSPDGQTIASASDDKTVKLWNRNGQ 540 (577)
T ss_dssp EEEEEETTSCEEEEEECCS----------------SCEEEEE-ECTTSSCEEEEETTSEEEEECTTSC
T ss_pred EEEEEcCCCCEEEEEeCCC----------------CCEEEEE-EcCCCCEEEEEECcCEEEEEeCCCC
Confidence 999999888 55554421 1234566 4667776666667788888887764
No 140
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.73 E-value=0.81 Score=42.76 Aligned_cols=111 Identities=7% Similarity=-0.073 Sum_probs=72.4
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
....++++++|+++++-..++.|..++..... ....... -.....++++++|+++++-..+
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDNTVRSWDLREGR---QLQQHDF----------------TSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEEC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEECCCCc---eEeeecC----------------CCceEEEEECCCCCEEEEEcCC
Confidence 35788999999876666677889999876321 1111110 1135789999999966665567
Q ss_pred CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|+.++... ...+.+. -.....++ ..+++.++++-..++.|+.++....
T Consensus 246 ~~i~~~~~~~~~~~~~~~~----------------~~~v~~~~-~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQLHLH----------------ESCVLSLK-FAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp SCEEEEETTSSCEEEECCC----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CcEEEEECCCCCeEEEcCC----------------ccceeEEE-ECCCCCEEEEecCCCcEEEEECCCC
Confidence 8899998766 3333221 11234565 5667777777777888888887754
No 141
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.53 E-value=0.61 Score=45.16 Aligned_cols=129 Identities=12% Similarity=0.169 Sum_probs=81.9
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccC
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFN 135 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln 135 (486)
.+...+..+..+..+.. ....++++++|+.+++-...+.|..++..... ....+.+. -.
T Consensus 107 Wd~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~--~~~~~~~~----------------~~ 165 (321)
T 3ow8_A 107 WDLENGKQIKSIDAGPV---DAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTR----------------GK 165 (321)
T ss_dssp EETTTTEEEEEEECCTT---CCCCEEECTTSSEEEEECTTSEEEEEETTTCS--EEEEEECS----------------SS
T ss_pred EECCCCCEEEEEeCCCc---cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc--eeEEecCC----------------Cc
Confidence 34445555554443322 34678999999988888888889888876432 11112111 11
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCC
Q 011435 136 HPKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNA 212 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~ 212 (486)
....++++++|+++++=..++.|+.+|... +.++.+.. .....++ ..+++.++++-..++
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~----------------~~v~~l~-~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA----------------MPIRSLT-FSPDSQLLVTASDDG 228 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS----------------SCCCEEE-ECTTSCEEEEECTTS
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC----------------CceeEEE-EcCCCCEEEEEcCCC
Confidence 346899999999766666678899998654 34443321 1124565 567787777777788
Q ss_pred eEEEEECCCC
Q 011435 213 ALRQISLNQD 222 (486)
Q Consensus 213 rIr~id~~G~ 222 (486)
.|+.++....
T Consensus 229 ~i~iwd~~~~ 238 (321)
T 3ow8_A 229 YIKIYDVQHA 238 (321)
T ss_dssp CEEEEETTTC
T ss_pred eEEEEECCCc
Confidence 8888887653
No 142
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.39 E-value=0.73 Score=44.63 Aligned_cols=113 Identities=16% Similarity=0.181 Sum_probs=75.4
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..++++++|+++++-..++.|..+|..... ....+.+. -..-..|+++++|.++++=..++
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~--~~~~~~~h----------------~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGK--LLHTLEGH----------------AMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCCCEEEECTTSCEEEEECTTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccc----------------CCceeEEEEcCCCCEEEEEcCCC
Confidence 4688999999987777778889999876421 11122221 11346899999999777767778
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQDDC 224 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~~~ 224 (486)
.|+.+|... +.++.+.. .....++ ..+++.++++-..++.|+.++.....|
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~----------------~~v~~~~-~sp~~~~l~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHA----------------SWVLNVA-FCPDDTHFVSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp CEEEEETTTCCEEEEECCCS----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred eEEEEECCCcceeEEEcCCC----------------CceEEEE-ECCCCCEEEEEeCCCcEEEEeCCCCEE
Confidence 899998654 34443321 1134565 566777777777788899998875433
No 143
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.38 E-value=0.53 Score=44.07 Aligned_cols=107 Identities=10% Similarity=0.056 Sum_probs=68.2
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
....++++++|.++++-..++.|..++..... ...+.+. -.....++++++|+++++-..+
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~---~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD---KYQLHLH----------------ESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSC---EEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCC---eEEEcCC----------------ccceeEEEECCCCCEEEEecCC
Confidence 35788888888866666667788888876432 1222111 1246789999999976666668
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEEC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISL 219 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~ 219 (486)
+.|+.++... +...... .....++ ..+++.++++-..++.|+.+++
T Consensus 287 g~i~~~~~~~~~~~~~~~~~-----------------~~v~~~~-~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 287 NLLNAWRTPYGASIFQSKES-----------------SSVLSCD-ISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTTCCEEEEEECS-----------------SCEEEEE-ECTTSCEEEEEETTSCEEEEEE
T ss_pred CcEEEEECCCCeEEEEecCC-----------------CcEEEEE-ECCCCCEEEEecCCCeEEEEEE
Confidence 8999998655 2221111 1234565 5666766666666777777663
No 144
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.24 E-value=0.33 Score=50.03 Aligned_cols=106 Identities=13% Similarity=0.199 Sum_probs=70.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
...+++++||.++++-..++.|..++.++.. ...+.+. -...+.|+++++|.+.++=..++
T Consensus 470 v~~~~~spd~~~las~~~d~~i~iw~~~~~~---~~~~~~h----------------~~~v~~l~~s~dg~~l~s~~~dg 530 (577)
T 2ymu_A 470 VRGVAFSPDGQTIASASDDKTVKLWNRNGQL---LQTLTGH----------------SSSVRGVAFSPDGQTIASASDDK 530 (577)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSCE---EEEEECC----------------SSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEcCCCCE---EEEEeCC----------------CCCEEEEEEcCCCCEEEEEECcC
Confidence 4789999999988877778889888876432 2333332 11357899999998555544578
Q ss_pred EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEE
Q 011435 157 AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIS 218 (486)
Q Consensus 157 rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id 218 (486)
.|+.+|.+| +.++.|-. ....+++ ..++|+.+++-..++.|+..|
T Consensus 531 ~v~lwd~~~~~~~~~~~h~----------------~~v~~~~-fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 531 TVKLWNRNGQLLQTLTGHS----------------SSVWGVA-FSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECTTSCEEEEEECCS----------------SCEEEEE-ECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEeCCCCEEEEEcCCC----------------CCEEEEE-EcCCCCEEEEEeCCCEEEEeC
Confidence 899999887 55554421 1134666 466777667666667776653
No 145
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.14 E-value=0.8 Score=50.25 Aligned_cols=115 Identities=10% Similarity=0.077 Sum_probs=74.1
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
...+|+.|++|+|||+-..+ .|+++++++.. ...+... .|. .-+....|+.|++|+|||+-. +
T Consensus 496 ~i~~i~~d~~g~lWigt~~~-Gl~~~~~~~~~---~~~~~~~----~~l--------~~~~i~~i~~d~~g~lWi~T~-~ 558 (781)
T 3v9f_A 496 FVRSIAQDSEGRFWIGTFGG-GVGIYTPDMQL---VRKFNQY----EGF--------CSNTINQIYRSSKGQMWLATG-E 558 (781)
T ss_dssp CEEEEEECTTCCEEEEESSS-CEEEECTTCCE---EEEECTT----TTC--------SCSCEEEEEECTTSCEEEEET-T
T ss_pred eeEEEEEcCCCCEEEEEcCC-CEEEEeCCCCe---EEEccCC----CCC--------CCCeeEEEEECCCCCEEEEEC-C
Confidence 45789999999999987644 48889986432 2222211 110 112457899999999999976 4
Q ss_pred CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+-|.++|+.+ +..+... +|... +...+++ .|.+|+||++- ++.|.++++...
T Consensus 559 Glv~~~d~~~~~~~~~~~~--------~gl~~----~~i~~i~-~d~~g~lW~~t--~~Gl~~~~~~~~ 612 (781)
T 3v9f_A 559 GLVCFPSARNFDYQVFQRK--------EGLPN----THIRAIS-EDKNGNIWAST--NTGISCYITSKK 612 (781)
T ss_dssp EEEEESCTTTCCCEEECGG--------GTCSC----CCCCEEE-ECSSSCEEEEC--SSCEEEEETTTT
T ss_pred CceEEECCCCCcEEEcccc--------CCCCC----ceEEEEE-ECCCCCEEEEc--CCceEEEECCCC
Confidence 4338898765 4444211 22211 1134675 78999999995 445999998854
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.00 E-value=2.3 Score=41.04 Aligned_cols=112 Identities=10% Similarity=0.063 Sum_probs=73.9
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..+++.++|.++++-..++.|..+|..... ....+.+. -...+.|+++++|+++++=..++
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~--~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGM--CRQTFTGH----------------ESDINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCS--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCe--eEEEEcCC----------------cCCEEEEEEcCCCCEEEEEcCCC
Confidence 4678888999888887778888888875321 11222221 11357899999999777777788
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+.+|... +.++.... .......++ ..++|.++++-..++.|+.++...
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~--------------~~~~v~~~~-~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDN--------------IICGITSVS-FSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp CEEEEETTTTEEEEEECCTT--------------CCSCEEEEE-ECTTSSEEEEEETTSEEEEEETTT
T ss_pred cEEEEECCCCcEEEEEccCC--------------cccceEEEE-ECCCCCEEEEECCCCeEEEEEccc
Confidence 999998754 33332110 011123455 577888888888888899998764
No 147
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.90 E-value=0.27 Score=54.03 Aligned_cols=117 Identities=6% Similarity=-0.031 Sum_probs=73.8
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
....|+.|++|.|||+-. +.|.++++.+.. ...+.... +. ...-+....|+.|++|+|||+-.+
T Consensus 451 ~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~---~~~~~~~~-------~~---~~~~~~i~~i~~d~~g~lWigt~~- 514 (781)
T 3v9f_A 451 DVRVFYEDKNKKIWIGTH--AGVFVIDLASKK---VIHHYDTS-------NS---QLLENFVRSIAQDSEGRFWIGTFG- 514 (781)
T ss_dssp CEEEEEECTTSEEEEEET--TEEEEEESSSSS---CCEEECTT-------TS---SCSCSCEEEEEECTTCCEEEEESS-
T ss_pred eEEEEEECCCCCEEEEEC--CceEEEeCCCCe---EEecccCc-------cc---ccccceeEEEEEcCCCCEEEEEcC-
Confidence 346788888999999875 579999876432 22222110 00 001245779999999999999764
Q ss_pred CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|.++++++ +..+... ++.. -+....|+ .|.+|+|||+-. ++-|.+++....
T Consensus 515 ~Gl~~~~~~~~~~~~~~~~--------~~l~----~~~i~~i~-~d~~g~lWi~T~-~Glv~~~d~~~~ 569 (781)
T 3v9f_A 515 GGVGIYTPDMQLVRKFNQY--------EGFC----SNTINQIY-RSSKGQMWLATG-EGLVCFPSARNF 569 (781)
T ss_dssp SCEEEECTTCCEEEEECTT--------TTCS----CSCEEEEE-ECTTSCEEEEET-TEEEEESCTTTC
T ss_pred CCEEEEeCCCCeEEEccCC--------CCCC----CCeeEEEE-ECCCCCEEEEEC-CCceEEECCCCC
Confidence 3488899876 4444321 1111 11234564 789999999976 444488887654
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.41 E-value=2 Score=38.89 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=45.9
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCC-CcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPL-SQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADT 153 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g-~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 153 (486)
...++++++||+.+++.. .+.|++++.++ .. ...+... . .-.....++++++|. |+++..
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~---~~~~~~~---~-----------~~~~~~~~~~spdg~~l~~~~~ 104 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS---PEKVDTG---F-----------ATICNNDHGISPDGALYAISDK 104 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS---CEECCCT---T-----------CCCBCSCCEECTTSSEEEEEEC
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC---ceEeccc---c-----------ccccccceEECCCCCEEEEEEe
Confidence 368999999999555543 56899999874 32 2221110 0 012356889999998 555442
Q ss_pred ---CCCEEEEEcCCC
Q 011435 154 ---LNLAIRKIGDAG 165 (486)
Q Consensus 154 ---~n~rIrkid~~G 165 (486)
...+|+.++.++
T Consensus 105 ~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 105 VEFGKSAIYLLPSTG 119 (297)
T ss_dssp TTTSSCEEEEEETTC
T ss_pred CCCCcceEEEEECCC
Confidence 257888888655
No 149
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.21 E-value=1.2 Score=42.06 Aligned_cols=109 Identities=12% Similarity=0.092 Sum_probs=68.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..|+++++|+++++-..++.|..++..... ....+.+. -..-..|+++++|+++++-..++
T Consensus 35 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--RLGTLDGH----------------TGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EEEEEECTTSCEEEEEESSSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--hhhhhhhc----------------CCcEEEEEEcCCCCEEEEEeCCC
Confidence 4789999999977766667788888865322 12222221 11346899999998666655678
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC-----CeEEEEECCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN-----AALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn-----~rIr~id~~G 221 (486)
.|+.+|... +.++... .....++ ..+++..+++-..+ +.|+.++...
T Consensus 97 ~i~iwd~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~~~~~~~~~~~g~i~~~d~~~ 151 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSP-----------------VPVKRVE-FSPCGNYFLAILDNVMKNPGSINIYEIER 151 (369)
T ss_dssp EEEEEETTTCCEEEEEECS-----------------SCEEEEE-ECTTSSEEEEEECCBTTBCCEEEEEEEEE
T ss_pred eEEEEECCCCcEEEEeecC-----------------CCeEEEE-EccCCCEEEEecCCccCCCCEEEEEEecC
Confidence 999998654 3333211 1234565 45666666655555 7788877654
No 150
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.15 E-value=1.3 Score=43.68 Aligned_cols=113 Identities=7% Similarity=-0.011 Sum_probs=70.1
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCCCC
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTLNL 156 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~n~ 156 (486)
..|++.+||+++++-...+.|...+..... ....+.|. -..-..+++.++|. ++++-..++
T Consensus 131 ~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--~~~~~~~h----------------~~~V~~~~~~~~~~~~l~s~s~D~ 192 (344)
T 4gqb_B 131 STVSVLSSGTQAVSGSKDICIKVWDLAQQV--VLSSYRAH----------------AAQVTCVAASPHKDSVFLSCSEDN 192 (344)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCc----------------CCceEEEEecCCCCCceeeecccc
Confidence 678899999988877777889888876421 11222221 11346788988875 777666678
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.|+..|... +.++..... -.....+++...++.++++-..++.|+.+|....
T Consensus 193 ~v~iwd~~~~~~~~~~~~~~~--------------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 193 RILLWDTRCPKPASQIGCSAP--------------GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST 247 (344)
T ss_dssp CEEEEETTSSSCEEECC------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-
T ss_pred ccccccccccceeeeeeccee--------------eccceeeeecCCCCcceEEeccCCcEEEEECCCC
Confidence 899888654 333321100 0123456644456677777777788888887643
No 151
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.99 E-value=1.7 Score=42.74 Aligned_cols=121 Identities=11% Similarity=0.029 Sum_probs=76.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..|++.++|..+++-...+.|..+|..... ...++... ... .......-..++++++|.+.++-..++
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--~~~~~~~~----~~~-----~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--QLQVYNRE----PDR-----NDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTE--EEEEECCC----CSS-----SCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCc--EEEEeccc----ccc-----cccccCceEEEEECCCCCEEEEEECCC
Confidence 4578888888888887778888888875321 11122211 000 011122346899999999888877889
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+.+|... +..+..... + .-..-..++ ..++|.++++-..++.|+..+..+
T Consensus 321 ~i~vwd~~~~~~~~~~~~~~~---~---------h~~~v~~l~-~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 321 DCYVWDTLLAEMVLNLGTLQN---S---------HEGRISCLG-LSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CEEEEETTTCCEEEEECCSCS---S---------CCCCCCEEE-ECSSSSEEEEECTTSCEEEEECCS
T ss_pred CEEEEECCCCceEEEEecccC---C---------CCCceEEEE-ECCCCCEEEEeeCCCCEEEEecCC
Confidence 999998644 333321100 1 111235676 678888888888889999998875
No 152
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.86 E-value=4.3 Score=38.06 Aligned_cols=111 Identities=10% Similarity=0.117 Sum_probs=68.4
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..++++++|+++++-..++.|..++..... ....+.+. -..-..++++++|+++++=..++
T Consensus 110 v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAH----------------SDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCE--EEEEecCC----------------CCcEEEEEEcCCCCEEEEEeCCC
Confidence 3677888888877777777888888875321 11111111 11246789999998666666678
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCC-ceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSND-FDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P-~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.|+.+|... +..+.... ..+ ..++ ..+++..+++-..++.|+.++....
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDD----------------NPPVSFVK-FSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp CEEEEETTTCCEEEEECCSS----------------CCCEEEEE-ECTTSSEEEEEETTTEEEEEETTTT
T ss_pred cEEEEECCCCceeeEEeccC----------------CCceEEEE-ECCCCCEEEEEcCCCeEEEEECCCC
Confidence 899998654 33332210 011 2344 5666766666666777888887654
No 153
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.84 E-value=2.6 Score=41.37 Aligned_cols=133 Identities=13% Similarity=0.136 Sum_probs=79.1
Q ss_pred EEccCCcEEEEEe-cCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEE-ecccCCccccCCCCccccc
Q 011435 56 LQFENGYLVETVI-EGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLV-AGSFQGYTGHVDGKPNEAR 133 (486)
Q Consensus 56 v~~~~G~~vetv~-~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~v-aG~~~G~~G~~dG~~~~a~ 133 (486)
.+...+..+.++. .+.. .....++++++|+++++-..++.|..++..... ....+ .+. .+
T Consensus 159 wd~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~----~~---------- 220 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHP--DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT--VVAEKDRPH----EG---------- 220 (402)
T ss_dssp EETTTTEEEEEECTTTCC--SCEEEEEECTTSSCEEEEETTSEEEEEETTTTE--EEEEEECSS----CS----------
T ss_pred EECCCCCccEEEecCCCC--CceEEEEECCCCCEEEEEecCCcEEEEeCCCCc--eeeeeccCC----CC----------
Confidence 4444555444442 1111 235789999999876666677899999976421 11111 111 11
Q ss_pred cCCcceEEEcCCCCEEEEe---CCCCEEEEEcCCC----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEE
Q 011435 134 FNHPKGVTMDDKGNLYVAD---TLNLAIRKIGDAG----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLV 206 (486)
Q Consensus 134 Ln~P~GIavD~dG~LYVAD---~~n~rIrkid~~G----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYV 206 (486)
..+..++++++|.++++- ..++.|+.+|... +....... -.....+++......|++
T Consensus 221 -~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 221 -TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT---------------SSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp -SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC---------------CSSCEEEEEETTTTEEEE
T ss_pred -CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC---------------CCceeEEEEcCCCCEEEE
Confidence 136789999999877765 5678899998765 22221110 012345665444446777
Q ss_pred EeCCCCeEEEEECCCC
Q 011435 207 IDRGNAALRQISLNQD 222 (486)
Q Consensus 207 aD~gn~rIr~id~~G~ 222 (486)
+...++.|+.++....
T Consensus 285 ~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 285 CGKGDSSIRYFEITSE 300 (402)
T ss_dssp EETTCSCEEEEEECSS
T ss_pred EEcCCCeEEEEEecCC
Confidence 8877888999988753
No 154
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.64 E-value=2 Score=42.53 Aligned_cols=109 Identities=12% Similarity=0.021 Sum_probs=70.3
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCE
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLA 157 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~r 157 (486)
..+++++||+++++-..++.|..++..... ....+.|. -..-..|++.++|+.+++-..++.
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--~~~~~~~h----------------~~~v~~~~~~p~~~~l~s~s~d~~ 188 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMILQGH----------------EQDIYSLDYFPSGDKLVSGSGDRT 188 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccC----------------CCCEEEEEEcCCCCEEEEecCCCc
Confidence 578999999988877778889999876431 11222221 113468999999997777667789
Q ss_pred EEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 158 IRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 158 Irkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
|+.+|... +.++... .....+++...++.++++-..++.|+.++...
T Consensus 189 v~iwd~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~ 238 (393)
T 1erj_A 189 VRIWDLRTGQCSLTLSIE-----------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 238 (393)
T ss_dssp EEEEETTTTEEEEEEECS-----------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTT
T ss_pred EEEEECCCCeeEEEEEcC-----------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 99998654 2333211 01234553333677777777777888888764
No 155
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.63 E-value=4.9 Score=40.37 Aligned_cols=110 Identities=22% Similarity=0.211 Sum_probs=65.3
Q ss_pred ceeEEEccCCe-EEEEECC--CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEe
Q 011435 77 PYKIRVSEDGE-LFAVDEV--NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVAD 152 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~--n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 152 (486)
...+++++||+ |+++... +..|+.++..+.. ...+.+. . .....++++++|+ |+++-
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~---~~~l~~~----~------------~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA---VRQVASF----P------------RHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---EEEEECC----S------------SCEEEEEECTTSSEEEEEE
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc---EEEeecC----C------------CcccCEEEcCCCCEEEEEE
Confidence 57889999998 5544433 3589999987532 3333331 0 1356899999998 66454
Q ss_pred C--CCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCe-EEEEeC--CCCeEEEEECCCC
Q 011435 153 T--LNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCS-LLVIDR--GNAALRQISLNQD 222 (486)
Q Consensus 153 ~--~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~-LYVaD~--gn~rIr~id~~G~ 222 (486)
. ++..|+.+|..+ +..+.+.. .....++ ..++|. |+++.. +..+|+.++..+.
T Consensus 242 ~~~g~~~i~~~d~~~~~~~~l~~~~----------------~~~~~~~-~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQIRQVTDGR----------------SNNTEPT-WFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp CTTSSCEEEEEETTTCCEEECCCCS----------------SCEEEEE-ECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred ecCCCceEEEEECCCCCEEeCcCCC----------------CcccceE-ECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 3 245799998765 44433210 0123455 355554 555543 3347888887764
No 156
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.56 E-value=4.9 Score=37.68 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=71.5
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..++++++|+++++-..++.|..++..... ....+.+. -..-..++++++|+++++=..++
T Consensus 68 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~s~~~d~ 129 (312)
T 4ery_A 68 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGH----------------SNYVFCCNFNPQSNLIVSGSFDE 129 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECSSSSEEEEEETTS
T ss_pred eEEEEEcCCCCEEEEECCCCEEEEEECCCCc--EEEEEcCC----------------CCCEEEEEEcCCCCEEEEEeCCC
Confidence 4789999999988877778899999876432 12222221 11245788999998777666678
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.|+.+|... +.++.+.. ..-..++ ..+++.++++-..++.|+.++....
T Consensus 130 ~i~iwd~~~~~~~~~~~~~~----------------~~v~~~~-~~~~~~~l~~~~~d~~i~~wd~~~~ 181 (312)
T 4ery_A 130 SVRIWDVKTGKCLKTLPAHS----------------DPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASG 181 (312)
T ss_dssp CEEEEETTTCCEEEEECCCS----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cEEEEECCCCEEEEEecCCC----------------CcEEEEE-EcCCCCEEEEEeCCCcEEEEECCCC
Confidence 899998654 34443210 0123454 4667776666667778888887643
No 157
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.50 E-value=3.4 Score=41.63 Aligned_cols=110 Identities=15% Similarity=0.069 Sum_probs=62.8
Q ss_pred ceeEEEccCCe-EEEEECC--CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEe
Q 011435 77 PYKIRVSEDGE-LFAVDEV--NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVAD 152 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~--n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 152 (486)
...+++++||+ |+++... +..|+.++..+.. ...+.+. -.....++++++|+ |+++-
T Consensus 225 ~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~---~~~l~~~----------------~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ---IRQVTDG----------------RSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---EEECCCC----------------SSCEEEEEECTTSSEEEEEE
T ss_pred ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC---EEeCcCC----------------CCcccceEECCCCCEEEEEE
Confidence 56889999998 6545432 4569999886432 2222221 01346789999998 55554
Q ss_pred C--CCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCC--CCeEEEEECCCC
Q 011435 153 T--LNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRG--NAALRQISLNQD 222 (486)
Q Consensus 153 ~--~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~g--n~rIr~id~~G~ 222 (486)
. +..+|+.+|.++ +..+.... .....++ ..++| .|+++... ...|+.+++++.
T Consensus 286 ~~~g~~~i~~~d~~~~~~~~l~~~~----------------~~~~~~~-~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGAPQRITWEG----------------SQNQDAD-VSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp CTTSSCEEEEEETTSSCCEECCCSS----------------SEEEEEE-ECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred CCCCCcEEEEEECCCCCEEEEecCC----------------CcccCeE-ECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 3 234888888766 33332210 0122344 34555 35555433 357778887654
No 158
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.43 E-value=1.6 Score=42.20 Aligned_cols=139 Identities=14% Similarity=0.084 Sum_probs=74.6
Q ss_pred cceeEEEccCCeEEEEECCC---CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEe
Q 011435 76 VPYKIRVSEDGELFAVDEVN---SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVAD 152 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n---~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 152 (486)
....++++++|.++++-..+ +.|..++..... ....+.+......-. -+ ..+.-.....|+++++|+++++-
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~-~~--~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQAS-LG--EFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC---------C--CBSBSSCEEEEEECSSSSEEEEE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCc--ccceeccCccccccc-cc--ccccCCcEEEEEECCCCCEEEEE
Confidence 35789999999977766666 789999876322 122222200000000 00 00011245789999999977766
Q ss_pred CCCCEEEEEcCCC---ceEEcCCCCCCCCc-CC---CCc--cccccCCCceeEEEcCCC----------eEEEEeCCCCe
Q 011435 153 TLNLAIRKIGDAG---VTTIAGGKSNVAGF-RD---GPS--EDAKFSNDFDVVYVRPTC----------SLLVIDRGNAA 213 (486)
Q Consensus 153 ~~n~rIrkid~~G---v~tiaGg~~g~~G~-~D---G~~--~~a~f~~P~gIa~vd~~G----------~LYVaD~gn~r 213 (486)
..++.|+.+|... +.++...... .+. .| |.. ....-.....++ ..++| .++++-..++.
T Consensus 310 ~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~v~~~~-~~~~g~~~~~~~~~~~~l~s~~~dg~ 387 (397)
T 1sq9_A 310 GWDGKLRFWDVKTKERITTLNMHCDD-IEIEEDILAVDEHGDSLAEPGVFDVK-FLKKGWRSGMGADLNESLCCVCLDRS 387 (397)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCGGG-CSSGGGCCCBCTTSCBCSSCCEEEEE-EECTTTSBSTTCTTSCEEEEEETTTE
T ss_pred eCCCeEEEEEcCCCceeEEEecccCc-ccchhhhhccccccccccCCceeEEE-eccccccccccccccceEEEecCCCc
Confidence 6788999999754 4455411000 000 00 000 000012245676 45665 67777777888
Q ss_pred EEEEECCC
Q 011435 214 LRQISLNQ 221 (486)
Q Consensus 214 Ir~id~~G 221 (486)
|+.++..+
T Consensus 388 i~iw~~~~ 395 (397)
T 1sq9_A 388 IRWFREAG 395 (397)
T ss_dssp EEEEEEEC
T ss_pred EEEEEcCC
Confidence 88888753
No 159
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.42 E-value=3.3 Score=38.93 Aligned_cols=109 Identities=10% Similarity=0.041 Sum_probs=67.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCE-EEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNL-YVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~L-YVAD~~n 155 (486)
..+++++++|.++++-..++.|..++..... ....+.. -.....++++++|.. +++...+
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ--VLKKYET-----------------DCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEEC-----------------SSCEEEEEECSSSSEEEEEECCC
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCc--eeeeecC-----------------CCCceeEEecCCCceEEEeecCC
Confidence 5789999999977776677899999876432 1111111 113568899998884 4444332
Q ss_pred C-------------EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEEC
Q 011435 156 L-------------AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISL 219 (486)
Q Consensus 156 ~-------------rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~ 219 (486)
. .|+.+|... +..+.+. -.....++ ..+++.++++-..++.|+.++.
T Consensus 282 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~----------------~~~v~~~~-~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 282 AKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH----------------FGPLNTVA-ISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp -------------CEEEEEETTTCCEEEEEECC----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEEEE
T ss_pred CceEEEEecCCCcceeEEEecCCCcchhheecc----------------cCcEEEEE-ECCCCCEEEEEcCCCeEEEEEC
Confidence 2 566666543 3333221 11234566 5678887777777888998887
Q ss_pred CC
Q 011435 220 NQ 221 (486)
Q Consensus 220 ~G 221 (486)
+.
T Consensus 345 ~~ 346 (369)
T 3zwl_B 345 EK 346 (369)
T ss_dssp CH
T ss_pred cc
Confidence 74
No 160
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.40 E-value=3 Score=40.32 Aligned_cols=108 Identities=7% Similarity=0.023 Sum_probs=70.6
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~n 155 (486)
...+++.++|.++++-..++.|..++.++. ....+.+. -.....|+++++|. ++++-..+
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGLDGH---EIFKEKLH----------------KAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTSC---EEEEEECS----------------SSCEEEEEECSSCTTEEEEEETT
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEECCCC---EEEEeccC----------------CCcEEEEEECCCCCCEEEEEeCC
Confidence 467888888887777667788888887532 12222221 12457899999998 77776677
Q ss_pred CEEEEEcCCC-------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcC-CCeEEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG-------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP-TCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G-------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~-~G~LYVaD~gn~rIr~id~~G 221 (486)
+.|+.+|... +.++ +. -.....++ ..+ ++.++++-..++.|+.++...
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~-~~----------------~~~v~~~~-~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 227 ATVKLWDLRNIKDKNSYIAEM-PH----------------EKPVNAAY-FNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp SEEEEEEGGGCCSTTCEEEEE-EC----------------SSCEEEEE-ECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CEEEEEeCCCCCcccceEEEe-cC----------------CCceEEEE-EcCCCCCEEEEEcCCCcEEEEECCC
Confidence 8899888542 2222 21 01234566 455 777777777778899998764
No 161
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.28 E-value=1.4 Score=48.45 Aligned_cols=114 Identities=7% Similarity=0.031 Sum_probs=72.2
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
...|..|++|.|||+.. +.|.++++++.. . .+... ....+ -.-+....|+.|++|+|||+-..
T Consensus 500 i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~---~-~~~~~-~~~~~--------l~~~~i~~i~~d~~g~lWigT~~-- 562 (795)
T 4a2l_A 500 ITTLFRDSHKRLWIGGE--EGLSVFKQEGLD---I-QKASI-LPVSN--------VTKLFTNCIYEASNGIIWVGTRE-- 562 (795)
T ss_dssp EEEEEECTTCCEEEEES--SCEEEEEEETTE---E-EECCC-SCSCG--------GGGSCEEEEEECTTSCEEEEESS--
T ss_pred EEEEEECCCCCEEEEeC--CceEEEeCCCCe---E-EEecC-CCCCC--------CCCCeeEEEEECCCCCEEEEeCC--
Confidence 46788999999999886 468888875422 1 11110 00001 01134568999999999999763
Q ss_pred EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.|.++|+.. +..+... +|... +...+|+ .|.+|+||++- ++.|.++++...
T Consensus 563 Gl~~~d~~~~~~~~~~~~--------~gl~~----~~i~~i~-~d~~g~lWi~t--~~Gl~~~~~~~~ 615 (795)
T 4a2l_A 563 GFYCFNEKDKQIKRYNTT--------NGLPN----NVVYGIL-EDSFGRLWLST--NRGISCFNPETE 615 (795)
T ss_dssp CEEEEETTTTEEEEECGG--------GTCSC----SCEEEEE-ECTTSCEEEEE--TTEEEEEETTTT
T ss_pred CceeECCCCCcEEEeCCC--------CCCch----hheEEEE-ECCCCCEEEEc--CCceEEEcCCCC
Confidence 788998765 4444211 12211 1124564 78999999997 467999998764
No 162
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.25 E-value=2.1 Score=42.10 Aligned_cols=112 Identities=12% Similarity=0.057 Sum_probs=67.0
Q ss_pred ceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcc-----cccEEEecccCCccccCCCCccccccCCcceEEEcCCC-CEE
Q 011435 77 PYKIRVSE-DGELFAVDEVNSNIVKITPPLSQY-----SRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG-NLY 149 (486)
Q Consensus 77 P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~-----~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG-~LY 149 (486)
-.++++++ +++++++-..++.|..++...... .....+.+. -.....|+++++| +++
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~p~~~~~l 147 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH----------------TKRVGIVAWHPTAQNVL 147 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC----------------SSCEEEEEECSSBTTEE
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC----------------CCeEEEEEECcCCCCEE
Confidence 47899999 888888777788999988764311 012222221 1245789999998 566
Q ss_pred EEeCCCCEEEEEcCCC---ceEE--cCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 150 VADTLNLAIRKIGDAG---VTTI--AGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 150 VAD~~n~rIrkid~~G---v~ti--aGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
++-..++.|+.+|... +.++ .+.. .....++ ..+++.++++-..++.|+.+++..
T Consensus 148 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 148 LSAGCDNVILVWDVGTGAAVLTLGPDVHP----------------DTIYSVD-WSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECTTTCC----------------SCEEEEE-ECTTSSCEEEEETTSEEEEEETTT
T ss_pred EEEcCCCEEEEEECCCCCccEEEecCCCC----------------CceEEEE-ECCCCCEEEEEecCCcEEEEeCCC
Confidence 6655678888888654 3444 2110 1123444 344555555544556666666654
No 163
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.94 E-value=2.8 Score=46.01 Aligned_cols=117 Identities=12% Similarity=0.059 Sum_probs=72.9
Q ss_pred ceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
-.+|+.|.+|+ |||+-.. +.|.++++.+.. ...+... +.. -.-+....|+.|++|+|||+-.
T Consensus 408 v~~i~~d~~g~~lWigt~~-~Gl~~~d~~~~~---~~~~~~~--------~~~---l~~~~v~~i~~d~~g~lwigt~-- 470 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHA-GGLSILHRNSGQ---VENFNQR--------NSQ---LVNENVYAILPDGEGNLWLGTL-- 470 (795)
T ss_dssp EEEEEEETTTTEEEEEETT-TEEEEEETTTCC---EEEECTT--------TSC---CSCSCEEEEEECSSSCEEEEES--
T ss_pred EEEEEEcCCCCEEEEEeCc-CceeEEeCCCCc---EEEeecC--------CCC---cCCCeeEEEEECCCCCEEEEec--
Confidence 45788899999 9998643 469999986432 2333211 000 0112467899999999999975
Q ss_pred CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|.++++.. +..+.... .. .+. .-.....++ .|++|+|||+-. +.|.+++....
T Consensus 471 ~Gl~~~~~~~~~~~~~~~~~-~~----~~~----~~~~i~~i~-~d~~g~lWigt~--~Gl~~~~~~~~ 527 (795)
T 4a2l_A 471 SALVRFNPEQRSFTTIEKEK-DG----TPV----VSKQITTLF-RDSHKRLWIGGE--EGLSVFKQEGL 527 (795)
T ss_dssp SCEEEEETTTTEEEECCBCT-TC----CBC----CCCCEEEEE-ECTTCCEEEEES--SCEEEEEEETT
T ss_pred CceeEEeCCCCeEEEccccc-cc----ccc----CCceEEEEE-ECCCCCEEEEeC--CceEEEeCCCC
Confidence 5688998765 33332110 00 000 012234564 799999999987 46888887654
No 164
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.92 E-value=1.9 Score=40.69 Aligned_cols=113 Identities=10% Similarity=0.028 Sum_probs=69.1
Q ss_pred ceeEEEccC---CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC
Q 011435 77 PYKIRVSED---GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT 153 (486)
Q Consensus 77 P~GlAVd~d---G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 153 (486)
-..|+++++ |+++++-..++.|..++...........+.+. -..-..|+++++|+++++=.
T Consensus 42 v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH----------------TGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC----------------SSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc----------------cCCEEEEEECcCCCEEEEEc
Confidence 478899988 68777766778888888763110111222221 11356899999998655555
Q ss_pred CCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEE-cCCCeEEEEeCCCCeEEEEECCC
Q 011435 154 LNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYV-RPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 154 ~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~v-d~~G~LYVaD~gn~rIr~id~~G 221 (486)
.++.|+.+|... ...+.+.. .....+++. .+++.++++-..++.|+.++...
T Consensus 106 ~dg~v~iwd~~~~~~~~~~~~~----------------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQIAQHD----------------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp TTSEEEEEETTTTEEEEEEECS----------------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred CCCcEEEEEcCCCCceeecccc----------------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 678999998766 32232210 112345421 56677666666677788888764
No 165
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.84 E-value=1.1 Score=44.77 Aligned_cols=111 Identities=16% Similarity=0.110 Sum_probs=72.4
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-.+|+++++|+++++-..++.|..++..+.. ....+.| + -..-..++++++|+.+++=..++
T Consensus 153 V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~--~~~~~~~-------h---------~~~V~~v~~~p~~~~l~s~s~D~ 214 (410)
T 1vyh_C 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRTMHG-------H---------DHNVSSVSIMPNGDHIVSASRDK 214 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCCCEEETTSSC--EEECCCC-------C---------SSCEEEEEECSSSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEcC-------C---------CCCEEEEEEeCCCCEEEEEeCCC
Confidence 4678888888887777777788888775321 0111111 1 11346899999999777666778
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.|+.+|... +.++.+.. ..-..++ ..++|.++++-..++.|+.++....
T Consensus 215 ~i~~wd~~~~~~~~~~~~h~----------------~~v~~~~-~~~~g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 215 TIKMWEVQTGYCVKTFTGHR----------------EWVRMVR-PNQDGTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp EEEEEETTTCCEEEEEECCS----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTC
T ss_pred eEEEEECCCCcEEEEEeCCC----------------ccEEEEE-ECCCCCEEEEEcCCCeEEEEECCCC
Confidence 999998654 45554321 0112344 5677888888878888998887654
No 166
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.84 E-value=2.2 Score=41.73 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=68.0
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-.++++.++|+++++-...+.|..+|..... ....+... ........++++++|.+.++-..++
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~~--------------~~~~~~~~~~~s~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRADR--EVAIYSKE--------------SIIFGASSVDFSLSGRLLFAGYNDY 306 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCT--------------TCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCC--------------CcccceeEEEEeCCCCEEEEEECCC
Confidence 4678888998887777777888888875321 11111110 0112356889999999777766678
Q ss_pred EEEEEcCC-C--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEE
Q 011435 157 AIRKIGDA-G--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQI 217 (486)
Q Consensus 157 rIrkid~~-G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~i 217 (486)
.|+.+|.. + +.++.+.. .....++ ..++|..+++-..++.|+.+
T Consensus 307 ~i~vwd~~~~~~~~~l~~h~----------------~~v~~l~-~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 307 TINVWDVLKGSRVSILFGHE----------------NRVSTLR-VSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp CEEEEETTTCSEEEEECCCS----------------SCEEEEE-ECTTSSCEEEEETTSEEEEE
T ss_pred cEEEEECCCCceEEEEECCC----------------CcEEEEE-ECCCCCEEEEEcCCCCEEec
Confidence 89999863 3 44444321 1234566 56777777777677777765
No 167
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=92.79 E-value=2.7 Score=40.51 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=67.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
..+|++.++|+++++-..++.|..+|..... ....... ......-..++++++|.++++=..++
T Consensus 229 v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~-------------~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 229 INAICFFPNGNAFATGSDDATCRLFDLRADQ---ELMTYSH-------------DNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECC-------------TTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEECCCCc---EEEEEcc-------------CCcccceEEEEECCCCCEEEEECCCC
Confidence 5788999999988887778889988875321 1111110 00111346789999999777777788
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEE
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQI 217 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~i 217 (486)
.|+.+|... +.++.+.. ..-..++ ..++|.++++-..++.|+..
T Consensus 293 ~i~vwd~~~~~~~~~~~~h~----------------~~v~~~~-~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 293 NCNVWDALKADRAGVLAGHD----------------NRVSCLG-VTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EEEEEETTTCCEEEEEECCS----------------SCEEEEE-ECTTSSCEEEEETTSCEEEE
T ss_pred eEEEEEcccCcEeeEeecCC----------------CcEEEEE-EcCCCCEEEEEcCCccEEec
Confidence 999998644 44454321 1123455 46667666666666666654
No 168
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.79 E-value=0.84 Score=43.58 Aligned_cols=114 Identities=11% Similarity=-0.019 Sum_probs=67.3
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..++++++|+++++-..++.|..++.++........+.+. -.....|+++++|+++++=..++
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~~~~~dg 74 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH----------------NGQVTGVDWAPDSNRIVTCGTDR 74 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECC----------------SSCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC----------------CCcccEEEEeCCCCEEEEEcCCC
Confidence 47889999999777777788999888764311112222221 11357899999998666555567
Q ss_pred EEEEEcCCC--c-eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG--V-TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G--v-~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+.+|... . ..+.-.. .-.....++ ..+++.++++-..++.|+.++.+.
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~--------------~~~~v~~~~-~~~~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILR--------------INRAARCVR-WAPNEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp CEEEEEEETTEEEEEEECCC--------------CSSCEEEEE-ECTTSSEEEEEETTSSEEEEEEET
T ss_pred eEEEEECCCCeeeeeEEeec--------------CCCceeEEE-ECCCCCEEEEEeCCCEEEEEEecC
Confidence 788887543 1 1221110 001234565 455665555555667777766654
No 169
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.65 E-value=4 Score=36.85 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=60.0
Q ss_pred ceeEEEccCCe-EEEEEC---CCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 77 PYKIRVSEDGE-LFAVDE---VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~---~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
..++++++||. |+++.. ...+|+.++.++.. ...+... .....++++++|+ |+++
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~-----------------~~~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTKN-----------------LPSYWHGWSPDGKSFTYC 146 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCSS-----------------SSEEEEEECTTSSEEEEE
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeecC-----------------CCccceEECCCCCEEEEE
Confidence 46789999998 444442 25688888876432 2222211 1256789999998 5544
Q ss_pred eCCCC--EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCe-EEEEe--CCCCeEEEEECCC
Q 011435 152 DTLNL--AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCS-LLVID--RGNAALRQISLNQ 221 (486)
Q Consensus 152 D~~n~--rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~-LYVaD--~gn~rIr~id~~G 221 (486)
...++ +|+.++.++ +..+... -.....++ ..++|. |+++. .+..+|+.++..+
T Consensus 147 ~~~~~~~~l~~~~~~~~~~~~~~~~----------------~~~~~~~~-~s~dg~~l~~~~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 147 GIRDQVFDIYSMDIDSGVETRLTHG----------------EGRNDGPD-YSPDGRWIYFNSSRTGQMQIWRVRVDG 206 (297)
T ss_dssp EEETTEEEEEEEETTTCCEEECCCS----------------SSCEEEEE-ECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred ECCCCceEEEEEECCCCcceEcccC----------------CCccccce-ECCCCCEEEEEecCCCCccEEEECCCC
Confidence 43344 566666654 3333221 01234565 455554 56554 3456677777554
No 170
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=92.64 E-value=2.7 Score=39.90 Aligned_cols=110 Identities=8% Similarity=0.020 Sum_probs=73.3
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-.+|+++++|.++++-...+.|...+..... ....+.+. -..-..+++.++|+++++=..++
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQV--EVRSIQVT----------------ETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECC----------------SSCEEEEEEEGGGTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCc--eeEEeecc----------------CCcEEEEEEeCCCCEEEEECCCC
Confidence 4789999999987777778899999876432 12222221 00235788888999777666778
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+.+|... +.++.+.. ..-..++ ..+++.++++-..++.|+.++...
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~----------------~~v~~~~-~~~~~~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHP----------------DYIRSIA-VHPTKPYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp EEEEEETTTCCEEEEEECCS----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEEGGG
T ss_pred EEEEEECCCCcEEEEEeCCC----------------CcEEEEE-EcCCCCEEEEECCCCeEEEEECCC
Confidence 999998654 44443321 1124565 567777777777888888888764
No 171
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.61 E-value=5.7 Score=38.92 Aligned_cols=114 Identities=7% Similarity=-0.048 Sum_probs=68.3
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCE
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLA 157 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~r 157 (486)
.++++.+|+.|.++. .++.|...+.+............ .|+ -..-+.|+++++|+++++=..++.
T Consensus 86 ~~~~~s~d~~l~~~s-~dg~v~lWd~~~~~~~~~~~~~~-----~~H---------~~~V~~v~~spdg~~l~sgs~d~~ 150 (344)
T 4gqb_B 86 ADLTWVGERGILVAS-DSGAVELWELDENETLIVSKFCK-----YEH---------DDIVSTVSVLSSGTQAVSGSKDIC 150 (344)
T ss_dssp EEEEEETTTEEEEEE-TTSEEEEEEECTTSSCEEEEEEE-----ECC---------SSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEeCCCeEEEEE-CCCEEEEEeccCCCceeEeeccc-----cCC---------CCCEEEEEECCCCCEEEEEeCCCe
Confidence 568888888776654 56788888875432111111111 111 112468999999997776666788
Q ss_pred EEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 158 IRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 158 Irkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
|+..|... +.++.+.. ..-..+++...+..++++-..++.|+.+|....
T Consensus 151 i~iwd~~~~~~~~~~~~h~----------------~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSYRAHA----------------AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp EEEEETTTTEEEEEECCCS----------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTSS
T ss_pred EEEEECCCCcEEEEEcCcC----------------CceEEEEecCCCCCceeeecccccccccccccc
Confidence 99998654 45554321 112345543333467777777788888887643
No 172
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.40 E-value=1.7 Score=41.89 Aligned_cols=109 Identities=5% Similarity=-0.041 Sum_probs=68.2
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..++++++|.++++-..++.|..++..... ....+.+. -.....++++++| ++++-..++
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~-~l~~~~~d~ 310 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGN--SQNCFYGH----------------SQSIVSASWVGDD-KVISCSMDG 310 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBS--CSEEECCC----------------SSCEEEEEEETTT-EEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCc--cceEecCC----------------CccEEEEEECCCC-EEEEEeCCC
Confidence 3567787887766666666778777765321 11222211 1135689999998 666666778
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+.+|... +..+.+.. .....++ ..+++.++++-..++.|+.++...
T Consensus 311 ~i~i~d~~~~~~~~~~~~~~----------------~~i~~~~-~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSIVDG----------------VPIFAGR-ISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEEEEETTTTEEEEEEECTT----------------CCEEEEE-ECTTSSEEEEEETTSCEEEEECHH
T ss_pred cEEEEECCCCcEeEecccCC----------------ccEEEEE-EcCCCCEEEEEECCCeEEEEECCC
Confidence 999999754 33443210 1234565 566777777777778888888764
No 173
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.37 E-value=1.6 Score=42.39 Aligned_cols=112 Identities=11% Similarity=0.057 Sum_probs=74.3
Q ss_pred ceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
-.++++.+ +++++++-..++.|..++..+. ....+.+. .+ .-.....++++++|+++++-..+
T Consensus 121 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~----~~---------~~~~v~~~~~~~~~~~l~~~~~d 184 (383)
T 3ei3_B 121 ITGMKFNQFNTNQLFVSSIRGATTLRDFSGS---VIQVFAKT----DS---------WDYWYCCVDVSVSRQMLATGDST 184 (383)
T ss_dssp EEEEEEETTEEEEEEEEETTTEEEEEETTSC---EEEEEECC----CC---------SSCCEEEEEEETTTTEEEEEETT
T ss_pred eeEEEeCCCCCCEEEEEeCCCEEEEEECCCC---ceEEEecc----CC---------CCCCeEEEEECCCCCEEEEECCC
Confidence 57889988 6777777667788999988742 23333331 01 01235789999999966666667
Q ss_pred CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCe-EEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCS-LLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gn~rIr~id~~G 221 (486)
+.|+.+|..+ +.++.+.. .....++ ..+++. ++++-..++.|+.++...
T Consensus 185 ~~i~i~d~~~~~~~~~~~h~----------------~~v~~~~-~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 185 GRLLLLGLDGHEIFKEKLHK----------------AKVTHAE-FNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp SEEEEEETTSCEEEEEECSS----------------SCEEEEE-ECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEECCCCEEEEeccCC----------------CcEEEEE-ECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 8999999877 45554321 1234566 456665 777777788888888764
No 174
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.23 E-value=0.99 Score=45.20 Aligned_cols=111 Identities=13% Similarity=0.181 Sum_probs=73.0
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..+++.++|.++++-..++.|..++..... ...++.|. -..-..|+++++|+++++=..++
T Consensus 111 V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--~~~~l~~h----------------~~~V~~v~~~~~~~~l~sgs~D~ 172 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGH----------------TDSVQDISFDHSGKLLASCSADM 172 (410)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTCC--CCEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEEecc----------------CCcEEEEEEcCCCCEEEEEeCCC
Confidence 4678999999988888888899999876432 12233321 11346899999999777766778
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.|+.+|..+ +.++.+.. ..-..++ ..+++..+++-..++.|+.++....
T Consensus 173 ~i~iwd~~~~~~~~~~~~h~----------------~~V~~v~-~~p~~~~l~s~s~D~~i~~wd~~~~ 224 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGHD----------------HNVSSVS-IMPNGDHIVSASRDKTIKMWEVQTG 224 (410)
T ss_dssp CCCEEETTSSCEEECCCCCS----------------SCEEEEE-ECSSSSEEEEEETTSEEEEEETTTC
T ss_pred eEEEEeCCCCceeEEEcCCC----------------CCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCC
Confidence 888888766 23332210 1123455 4566766677777788888887643
No 175
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.05 E-value=9.7 Score=37.26 Aligned_cols=118 Identities=9% Similarity=0.048 Sum_probs=75.9
Q ss_pred ceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
-..+++.+ +++++++-..++.|..+|..... .....+.|. -..-+.|+++++|+++++=..+
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~D 270 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGH----------------EGDINSVKFFPDGQRFGTGSDD 270 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCC----------------SSCCCEEEECTTSSEEEEECSS
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCc----------------CCCeEEEEEecCCCeEEEEcCC
Confidence 35677765 78888888888889988875211 112233331 1135689999999988887888
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
+.|+.+|... +.++..... . ..........++ ..++|.++++-..++.|+.++...
T Consensus 271 ~~i~lwd~~~~~~~~~~~~~~~----~-----~~~~~~~v~~~~-~s~~g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 271 GTCRLFDMRTGHQLQVYNREPD----R-----NDNELPIVTSVA-FSISGRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp SCEEEEETTTTEEEEEECCCCS----S-----SCCSSCSCSEEE-ECSSSSEEEEECTTSCEEEEETTT
T ss_pred CeEEEEECCCCcEEEEeccccc----c-----cccccCceEEEE-ECCCCCEEEEEECCCCEEEEECCC
Confidence 9999998754 334332110 0 001112235666 577888888888889999999764
No 176
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.94 E-value=5.8 Score=38.29 Aligned_cols=112 Identities=15% Similarity=0.132 Sum_probs=66.3
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..|+++++|+++++-..++.|...+.+.........+.|. -..-..|+++++|+++++=..++
T Consensus 64 v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h----------------~~~v~~v~~sp~~~~l~s~s~D~ 127 (345)
T 3fm0_A 64 VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGH----------------ENEVKSVAWAPSGNLLATCSRDK 127 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCC----------------CCCceEEEEeCCCCEEEEEECCC
Confidence 47899999999777766677777776543211011122221 11346899999999777666667
Q ss_pred EEEEEcCCC------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+..|... +..+.+.. ..-..++ ..+++.++++-..++.|+.++...
T Consensus 128 ~v~iwd~~~~~~~~~~~~~~~h~----------------~~v~~~~-~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 128 SVWVWEVDEEDEYECVSVLNSHT----------------QDVKHVV-WHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CEEEEEECTTSCEEEEEEECCCC----------------SCEEEEE-ECSSSSCEEEEETTSCEEEEEEET
T ss_pred eEEEEECCCCCCeEEEEEecCcC----------------CCeEEEE-ECCCCCEEEEEeCCCcEEEEEecC
Confidence 788777532 12222110 1123455 456676666666677788777654
No 177
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.93 E-value=5.4 Score=38.83 Aligned_cols=128 Identities=10% Similarity=0.082 Sum_probs=71.9
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
.-..++++++|+++++-..++.|..++..... ....+.+. -.....|+++++|+++++-..+
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKDGS--NPRTLIGH----------------RATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--CCEEEECC----------------SSCEEEEEEETTTTEEEEEETT
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--CceEEcCC----------------CCcEEEEEEcCCCCEEEEEcCC
Confidence 35788999999877777777889988876332 12233221 1135689999999866665567
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCC-----cC-CCC--ccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAG-----FR-DGP--SEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G-----~~-DG~--~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|+.+|... +.++.+....... +. ++. .....-.....++ ..++|.++++-..++.|+.++....
T Consensus 203 ~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 203 GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE-FGTYGKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC-SSCTTEEEEEEETTSCEEEEETTTC
T ss_pred CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceE-EcCCCCEEEEEcCCCeEEEEECCCC
Confidence 8888888654 4444331100000 00 000 0000011223343 4567766666667777888887643
No 178
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.91 E-value=8.5 Score=36.30 Aligned_cols=129 Identities=9% Similarity=0.023 Sum_probs=78.6
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccC
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFN 135 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln 135 (486)
.+...+..+..+..... .-..+++.++|+++++-...+.|..++..... ....+.+. -.
T Consensus 40 Wd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~--~~~~~~~h----------------~~ 98 (304)
T 2ynn_A 40 WNYETQVEVRSIQVTET---PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAH----------------PD 98 (304)
T ss_dssp EETTTTEEEEEEECCSS---CEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SS
T ss_pred EECCCCceeEEeeccCC---cEEEEEEeCCCCEEEEECCCCEEEEEECCCCc--EEEEEeCC----------------CC
Confidence 45555555554432211 13577888999988877788899999976432 12222221 11
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCCC---c-eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC
Q 011435 136 HPKGVTMDDKGNLYVADTLNLAIRKIGDAG---V-TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN 211 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v-~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn 211 (486)
.-..|+++++|.++++=..++.|+..|... + .++.+.. ..-..+++...++.++++-..+
T Consensus 99 ~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~----------------~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE----------------HFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC----------------SCEEEEEECTTCTTEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC----------------CcEEEEEECCCCCCEEEEEeCC
Confidence 346899999999777766778888888543 2 2332210 1123555433356777777777
Q ss_pred CeEEEEECCC
Q 011435 212 AALRQISLNQ 221 (486)
Q Consensus 212 ~rIr~id~~G 221 (486)
+.|+.++...
T Consensus 163 ~~v~iwd~~~ 172 (304)
T 2ynn_A 163 RTVKVWSLGQ 172 (304)
T ss_dssp SEEEEEETTC
T ss_pred CeEEEEECCC
Confidence 8888888754
No 179
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.70 E-value=2.5 Score=40.79 Aligned_cols=130 Identities=12% Similarity=0.033 Sum_probs=72.5
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
....++++++| ++++-..++.|..++..... ....+.+. .++. ..-.....|+++++|+++++-..+
T Consensus 188 ~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~--~~~~~~~~----~~h~------~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNNGTVQISELSTLR--PLYNFESQ----HSMI------NNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp CCCEEEECTTS-EEEEECTTSEEEEEETTTTE--EEEEEECC----C---------CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred CceEEEECCCc-eEEEEeCCCcEEEEECCCCc--eeEEEecc----cccc------ccCCccceEEECCCCCEEEEEecC
Confidence 36789999999 88888888899999976321 11122210 0000 001145789999999966665555
Q ss_pred ---CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 ---LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ---~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|+.+|... +..+.+............ +.-.....++ ..+++.++++-..++.|+.++....
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEF---AHSSWVMSLS-FNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC--------CCB---SBSSCEEEEE-ECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCCceEEEEECCCCcccceeccCccccccccccc---ccCCcEEEEE-ECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 7899998654 444443100000000000 0011234555 4566766666667778888887643
No 180
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.65 E-value=8.2 Score=41.37 Aligned_cols=129 Identities=9% Similarity=0.013 Sum_probs=74.4
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccC
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFN 135 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln 135 (486)
.+...+..+.++..... .-.+++++++|.++++-..++.|..++..... ....+.+. -.
T Consensus 40 wd~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~----------------~~ 98 (814)
T 3mkq_A 40 WNYETQVEVRSIQVTET---PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAH----------------PD 98 (814)
T ss_dssp EETTTTEEEEEEECCSS---CEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SS
T ss_pred EECCCCceEEEEecCCC---cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEecC----------------CC
Confidence 45556666665542211 25789999999966666668899999876432 12222221 11
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCCC----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCC
Q 011435 136 HPKGVTMDDKGNLYVADTLNLAIRKIGDAG----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGN 211 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~rIrkid~~G----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn 211 (486)
....++++++|...++=..++.|+.++... ...+.+.. .....+++...++.++++-..+
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~----------------~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE----------------HFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS----------------SCEEEEEEETTEEEEEEEEETT
T ss_pred CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC----------------CcEEEEEEEcCCCCEEEEEeCC
Confidence 457899999998544444567888887543 23333211 0123444332255555555566
Q ss_pred CeEEEEECCC
Q 011435 212 AALRQISLNQ 221 (486)
Q Consensus 212 ~rIr~id~~G 221 (486)
+.|+.++...
T Consensus 163 g~v~vwd~~~ 172 (814)
T 3mkq_A 163 RTVKVWSLGQ 172 (814)
T ss_dssp SEEEEEETTC
T ss_pred CeEEEEECCC
Confidence 6676666543
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.50 E-value=3.8 Score=39.55 Aligned_cols=72 Identities=15% Similarity=0.057 Sum_probs=42.3
Q ss_pred ceeEEEcc-CCe-E-EEEECC----CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-E
Q 011435 77 PYKIRVSE-DGE-L-FAVDEV----NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-L 148 (486)
Q Consensus 77 P~GlAVd~-dG~-L-YVaD~~----n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-L 148 (486)
...+++++ ||. | |+.+.. ..+|+.++.++.. ...+... . .+ .....+++++||+ |
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~---~----~~-------~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN---MRKVKTH---A----EG-------ESCTHEFWVPDGSAL 252 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC---CEESCCC---C----TT-------EEEEEEEECTTSSCE
T ss_pred ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc---eEEeeeC---C----CC-------cccccceECCCCCEE
Confidence 46788999 987 4 444422 4478888876532 2222221 0 00 0123568999998 5
Q ss_pred -EEEeCCCC---EEEEEcCCC
Q 011435 149 -YVADTLNL---AIRKIGDAG 165 (486)
Q Consensus 149 -YVAD~~n~---rIrkid~~G 165 (486)
|+++.... .|+++|.++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTT
T ss_pred EEEecCCCCCcceEEEEecCC
Confidence 66664332 399999765
No 182
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=91.44 E-value=6.6 Score=38.21 Aligned_cols=111 Identities=9% Similarity=0.039 Sum_probs=68.5
Q ss_pred eeEEEcc--CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 78 YKIRVSE--DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 78 ~GlAVd~--dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
..+++.+ +|+++++-..++.|..+|..... ....+.+. -..-+.|+++++|+++++=..+
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~--~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~D 261 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ--CVQAFETH----------------ESDVNSVRYYPSGDAFASGSDD 261 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCC----------------CCCeEEEEEeCCCCEEEEEeCC
Confidence 4566654 56777776677888888875322 11222221 1134689999999977776677
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
+.|+.+|... +..+.... .......++ ..++|.++++-..++.|+.++...
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~~--------------~~~~~~~~~-~s~~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKES--------------IIFGASSVD-FSLSGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp SCEEEEETTTTEEEEEECCTT--------------CCSCEEEEE-ECTTSSEEEEEETTSCEEEEETTT
T ss_pred CeEEEEECCCCcEEEEEcCCC--------------cccceeEEE-EeCCCCEEEEEECCCcEEEEECCC
Confidence 8899998654 23332110 011223455 567787777777788899998753
No 183
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.43 E-value=2.6 Score=42.17 Aligned_cols=115 Identities=11% Similarity=0.131 Sum_probs=72.3
Q ss_pred eeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEeCCC
Q 011435 78 YKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVADTLN 155 (486)
Q Consensus 78 ~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD~~n 155 (486)
..|++.| +++++++-..++.|...+.+... ....+.. .|+ -..-++|++++ +|+++++=..+
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~--~~~~~~~-----~gH---------~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD--KPTFIKG-----IGA---------GGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCS--CCEEECC-----CSS---------SCCCCEEEECSSCTTEEEEECSS
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCC--ceeEEEc-----cCC---------CCCEEEEEEeCCCCCEEEEEeCC
Confidence 6789987 56777776777889988876432 1112111 111 01246899997 68877776777
Q ss_pred CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|+..|..+ +..+..... .-..-..++ ..+++.++++-..++.|+.++.++.
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~-------------~~~~~~~~~-~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDT-------------INIWFCSLD-VSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSS-------------CSCCCCCEE-EETTTTEEEEECSSSBEEEEESSSC
T ss_pred CEEEEeeccCCceeEEeccCC-------------CCccEEEEE-ECCCCCEEEEEeCCCcEeeeccCcc
Confidence 8899999876 444433210 001123455 4667777777778888999998764
No 184
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=91.40 E-value=3.4 Score=40.05 Aligned_cols=114 Identities=7% Similarity=0.008 Sum_probs=71.4
Q ss_pred cceeEEEccCC-eEEEEECCCC---EEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEE
Q 011435 76 VPYKIRVSEDG-ELFAVDEVNS---NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYV 150 (486)
Q Consensus 76 ~P~GlAVd~dG-~LYVaD~~n~---rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 150 (486)
....++++++| .++++-..++ .|..++..... .....+. .+ .-.....|++++ +|++++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~------~~---------~~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLN------QG---------HQKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCC------SC---------CSSCEEEEEECSSCSSCEE
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEee------cC---------ccCceeEEEeCCCCCCeEE
Confidence 35788888887 4666655555 78888765321 0000110 01 112457899998 888666
Q ss_pred EeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEEEEECCCC
Q 011435 151 ADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 151 AD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr~id~~G~ 222 (486)
+-..++.|+.+|... +.++.+.. .....++ ..+++ .++++-..++.|+.+++...
T Consensus 280 s~~~dg~v~~wd~~~~~~~~~~~~~~----------------~~v~~~~-~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAEQLSQFPARG----------------NWCFKTK-FAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEESSSEEEEECSSSCCEEEEEECSS----------------SCCCCEE-ECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred EEeCCCCEEEeeCCCCccceeecCCC----------------CceEEEE-ECCCCCCEEEEEecCCcEEEEEccCC
Confidence 666678999998654 44443321 1234676 45666 78888888899999998753
No 185
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=91.27 E-value=4.6 Score=39.85 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=70.2
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD~~n 155 (486)
-..+++.++|+.+++-...+.|..++..... ....... -.....+++.+ +|+++++-..+
T Consensus 168 v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~----------------~~~v~~~~~~~~~~~~l~~~s~d 228 (393)
T 1erj_A 168 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ---CSLTLSI----------------EDGVTTVAVSPGDGKYIAAGSLD 228 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEEC----------------SSCEEEEEECSTTCCEEEEEETT
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEECCCCe---eEEEEEc----------------CCCcEEEEEECCCCCEEEEEcCC
Confidence 4678899999877777778889888876422 1111110 01356788888 88877776677
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
+.|+.+|... +..+........+. -.....++ ..++|.++++-..++.|+.+++..
T Consensus 229 ~~v~iwd~~~~~~~~~~~~~~~~~~~h---------~~~v~~v~-~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 229 RAVRVWDSETGFLVERLDSENESGTGH---------KDSVYSVV-FTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp SCEEEEETTTCCEEEEEC------CCC---------SSCEEEEE-ECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEECCCCcEEEeecccccCCCCC---------CCCEEEEE-ECCCCCEEEEEeCCCEEEEEECCC
Confidence 8899998654 33332110000010 11234565 567777777777788888888764
No 186
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.24 E-value=4.1 Score=38.35 Aligned_cols=113 Identities=18% Similarity=0.100 Sum_probs=72.3
Q ss_pred ceeEEEccC----CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEE
Q 011435 77 PYKIRVSED----GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVA 151 (486)
Q Consensus 77 P~GlAVd~d----G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVA 151 (486)
-..+++.++ |.++++-..++.|..++..... ....+.+. -.....|++++ +++++++
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--CIKHYVGH----------------GNAINELKFHPRDPNLLLS 133 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--EEEEEESC----------------CSCEEEEEECSSCTTEEEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--EeeeecCC----------------CCcEEEEEECCCCCCEEEE
Confidence 477888887 6777777778899999976432 12222221 11457899999 8886666
Q ss_pred eCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 152 DTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 152 D~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
=..++.|+.+|... +..+... . + .-.....++ ..+++.++++-..++.|+.++...
T Consensus 134 ~~~dg~i~iwd~~~~~~~~~~~~~-~---~---------~~~~v~~~~-~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 134 VSKDHALRLWNIQTDTLVAIFGGV-E---G---------HRDEVLSAD-YDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EETTSCEEEEETTTTEEEEEECST-T---S---------CSSCEEEEE-ECTTSSEEEEEETTSCEEEEESCS
T ss_pred EeCCCeEEEEEeecCeEEEEeccc-c---c---------ccCceeEEE-ECCCCCEEEEecCCCCEEEEECCC
Confidence 55678899998654 3343210 0 0 011245666 466777777777778899999875
No 187
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.02 E-value=5 Score=43.69 Aligned_cols=112 Identities=18% Similarity=0.139 Sum_probs=68.7
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
...|..|.+|+|||+...++.|.++++... ....+... +.. .-+.+..|+.|.+|+|||+-. +
T Consensus 474 i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~---~~~~~~~~--~~~----------~~~~~~~i~~d~~g~lWigt~--~ 536 (758)
T 3ott_A 474 INQIIPDNEGNVWVLLYNNKGIDKINPRTR---EVTKLFAD--ELT----------GEKSPNYLLCDEDGLLWVGFH--G 536 (758)
T ss_dssp EEEEEECTTSCEEEEETTCSSEEEEETTTT---EEEEECTT--TSC----------GGGCEEEEEECTTSCEEEEET--T
T ss_pred eeeEEEcCCCCEEEEccCCCCcEEEeCCCC---ceEEecCC--CcC----------CCcccceEEECCCCCEEEEec--C
Confidence 467889999999994333456999998643 22322210 000 013577999999999999963 5
Q ss_pred EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
-|.++++.. +..+.- ++.. -+...+|+ . ++|+|||+- ++-|.++++...
T Consensus 537 Gl~~~~~~~~~~~~~~~---------~gl~----~~~i~~i~-~-~~g~lWi~t--~~Gl~~~~~~~~ 587 (758)
T 3ott_A 537 GVMRINPKDESQQSISF---------GSFS----NNEILSMT-C-VKNSIWVST--TNGLWIIDRKTM 587 (758)
T ss_dssp EEEEECC--CCCCBCCC---------CC-------CCEEEEE-E-ETTEEEEEE--SSCEEEEETTTC
T ss_pred ceEEEecCCCceEEecc---------cCCC----ccceEEEE-E-CCCCEEEEC--CCCeEEEcCCCc
Confidence 699999765 332210 1111 12234554 3 489999987 345899998754
No 188
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=90.97 E-value=3.4 Score=39.74 Aligned_cols=122 Identities=11% Similarity=-0.033 Sum_probs=65.6
Q ss_pred ceeEEEccCCe-EEEEECCCCEEEEEcC----CCCcc-c---ccEEEecccCCccccCCCCccccccCCcceEEEcCCCC
Q 011435 77 PYKIRVSEDGE-LFAVDEVNSNIVKITP----PLSQY-S---RGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN 147 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~n~rI~kid~----~g~~~-~---~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~ 147 (486)
-.+++++++|. ++++-..++.|..++. ..... . ....+.....+... ....-..-..|+++++|+
T Consensus 48 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSAS------SGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp CSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------------CBCEEEEEECTTSS
T ss_pred eEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccc------ccCCCCceEEEEEcCCCC
Confidence 57899999998 7777667788888876 43210 0 01112211100000 000112457899999998
Q ss_pred EEEEeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 148 LYVADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 148 LYVAD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
++++=..++.|+.++.++ +..+.+.. .....++ ..+++..+++-..++.|+.++...
T Consensus 122 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~----------------~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKTGALLNVLNFHR----------------APIVSVK-WNKDGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCC----------------SCEEEEE-ECTTSSEEEEEETTCCEEEEETTT
T ss_pred EEEEEeCCCeEEEEeCCCCeeeeccCCC----------------ccEEEEE-ECCCCCEEEEEecCCeEEEEECCC
Confidence 655555678899998777 44443321 1123454 344554444444456666666653
No 189
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.83 E-value=2.3 Score=42.68 Aligned_cols=113 Identities=10% Similarity=0.119 Sum_probs=74.7
Q ss_pred cceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcc-cccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEe
Q 011435 76 VPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQY-SRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVAD 152 (486)
Q Consensus 76 ~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~-~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 152 (486)
...++++.+ ++.++++...++.|..++...... .....+.+. -..++.|+++++|. ++++-
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----------------~~~v~~i~~~p~~~~~l~tg 296 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH----------------TAEVNCLSFNPYSEFILATG 296 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC----------------SSCEEEEEECSSCTTEEEEE
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC----------------CCCeEEEEeCCCCCCEEEEE
Confidence 357889988 677888888889999999764310 011122111 12467999999886 77776
Q ss_pred CCCCEEEEEcCCC----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEEEEECCC
Q 011435 153 TLNLAIRKIGDAG----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 153 ~~n~rIrkid~~G----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr~id~~G 221 (486)
..++.|+.+|... +.++.+.. .....+++ .+++ .++++-..+++|+.+++..
T Consensus 297 ~~dg~v~vwd~~~~~~~~~~~~~h~----------------~~v~~i~~-sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 297 SADKTVALWDLRNLKLKLHSFESHK----------------DEIFQVQW-SPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ETTSEEEEEETTCTTSCSEEEECCS----------------SCEEEEEE-CSSCTTEEEEEETTSCCEEEEGGG
T ss_pred eCCCeEEEEeCCCCCCCeEEeecCC----------------CCEEEEEE-CCCCCCEEEEEeCCCcEEEEeCCC
Confidence 6788999998653 44443321 12345664 4555 6888888888999998864
No 190
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.75 E-value=1.8 Score=43.40 Aligned_cols=112 Identities=11% Similarity=0.020 Sum_probs=70.5
Q ss_pred ceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
=.+|++.+ +|+++++-...+.|...|..+.. ...+.... . .-..-..++++++|+++++=..+
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~~----~---------~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI---LRVFASSD----T---------INIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTSCE---EEEEECCS----S---------CSCCCCCEEEETTTTEEEEECSS
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc---eeEEeccC----C---------CCccEEEEEECCCCCEEEEEeCC
Confidence 36899986 78888887778889999876432 23333210 0 01123578999999977776677
Q ss_pred CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~rIr~id~~G 221 (486)
+.|+.+|.++ +.++.+. -..-..+++ .+++ .++++-..++.|+.+++..
T Consensus 231 g~i~~wd~~~~~~~~~~~h----------------~~~v~~v~~-~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 231 GNVILLNMDGKELWNLRMH----------------KKKVTHVAL-NPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp SBEEEEESSSCBCCCSBCC----------------SSCEEEEEE-CTTCSSEEEEEETTSBCCEEETTT
T ss_pred CcEeeeccCcceeEEEecc----------------cceEEeeee-cCCCceEEEEecCcceeeEEeccc
Confidence 8999999776 3332221 011245654 4444 4666666777888888764
No 191
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.73 E-value=3.6 Score=40.24 Aligned_cols=114 Identities=7% Similarity=-0.049 Sum_probs=68.5
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~n 155 (486)
-..|++.++|+++++-..++.|..++..... ....+-+. -...+.|++.+++. ++++-..+
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--~~~~~~~h----------------~~~v~~v~~s~~~~~~~~s~~~d 203 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--VLKSYNAH----------------SSEVNCVAACPGKDTIFLSCGED 203 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEECTTCSSCEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCC----------------CCCEEEEEEccCCCceeeeeccC
Confidence 3678899999977777777888888876321 11111111 11356888988775 66666667
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|+.+|... +..+.... .-..+..+++.+.++.++++-..++.|+.++....
T Consensus 204 g~v~~wd~~~~~~~~~~~~~~--------------~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~ 259 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFCA--------------SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP 259 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCTT--------------CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG
T ss_pred CceEEEECCCCceeeeeeecc--------------ccccccchhhhhcccceEEEeecccceeEEECCCC
Confidence 8888888643 21111100 01123456654445667766666778888887653
No 192
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.72 E-value=2.4 Score=41.75 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=50.4
Q ss_pred cceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCe
Q 011435 137 PKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAA 213 (486)
Q Consensus 137 P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~r 213 (486)
-+.|+++++|+++++=..++.|+.+|... +.++..+. -..-+.|+ ..++|.++++-+..+.
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH---------------~~~V~~v~-fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH---------------SFAITEVT-ISPDSTYVASVSAANT 335 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS---------------SSCEEEEE-ECTTSCEEEEEETTSE
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc---------------cCCEEEEE-ECCCCCEEEEEeCCCe
Confidence 46789999999776655678899999755 44443221 11235677 5789999999999999
Q ss_pred EEEEECCC
Q 011435 214 LRQISLNQ 221 (486)
Q Consensus 214 Ir~id~~G 221 (486)
|+++++..
T Consensus 336 vrvw~ip~ 343 (365)
T 4h5i_A 336 IHIIKLPL 343 (365)
T ss_dssp EEEEECCT
T ss_pred EEEEEcCC
Confidence 99999864
No 193
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=90.58 E-value=10 Score=34.74 Aligned_cols=109 Identities=13% Similarity=0.116 Sum_probs=67.6
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
....+++.++|.|+ +-..++.|..++..... ....+.+. -.....|+++++|.|+.+. .+
T Consensus 186 ~i~~~~~~~~~~~~-~~~~dg~i~i~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~~l~~~~-~d 245 (313)
T 3odt_A 186 VVRHLAVVDDGHFI-SCSNDGLIKLVDMHTGD--VLRTYEGH----------------ESFVYCIKLLPNGDIVSCG-ED 245 (313)
T ss_dssp CEEEEEEEETTEEE-EEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECTTSCEEEEE-TT
T ss_pred cEEEEEEcCCCeEE-EccCCCeEEEEECCchh--hhhhhhcC----------------CceEEEEEEecCCCEEEEe-cC
Confidence 35778888888844 44456789988876321 11222221 1245789999999776665 46
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|+.+|... +.++.+.. .....++ ..+++.+++ -..++.|+.++....
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~----------------~~i~~~~-~~~~~~~~~-~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPA----------------ISIWSVD-CMSNGDIIV-GSSDNLVRIFSQEKS 297 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSS----------------SCEEEEE-ECTTSCEEE-EETTSCEEEEESCGG
T ss_pred CEEEEEECCCCceeEEEeccC----------------ceEEEEE-EccCCCEEE-EeCCCcEEEEeCCCC
Confidence 8899998654 34443321 1134565 567777554 445678888888753
No 194
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=90.51 E-value=3.1 Score=41.83 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=65.6
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccc--cEEEecccCCccccCCCCccccccCCcceEEEcCC---CCEEE
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSR--GRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK---GNLYV 150 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~--~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d---G~LYV 150 (486)
.+.+|+++++|..+++-...+.|+.++........ ...+. + .......|+++++ |.+++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-------~---------h~~~v~~~~~sp~~~~~~~l~ 214 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL-------G---------HVSMLTDVHLIKDSDGHQFII 214 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSE-------E---------CSSCEEEEEEEECTTSCEEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeee-------c---------ccCceEEEEEcCCCCCCcEEE
Confidence 46899999999855544457789888864321000 00001 1 1224678999998 86544
Q ss_pred EeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 151 ADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 151 AD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
+=..++.|+.+|... +.++..+. -.....+++ . ++.++++-..++.|+.++...
T Consensus 215 s~~~d~~i~vwd~~~~~~~~~~~~~h---------------~~~v~~~~~-s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQCFIVDKWLFGH---------------KHFVSSICC-G-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp EEETTSCEEEEEESCTTCEEEECCCC---------------SSCEEEEEE-C-STTEEEEEESSSEEEEEETTT
T ss_pred EEcCCCcEEEEECCCCceeeeeecCC---------------CCceEEEEE-C-CCCEEEEEeCCCeEEEEECCC
Confidence 444567888887543 33332110 012345654 4 666666666777888888764
No 195
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=90.50 E-value=12 Score=36.63 Aligned_cols=139 Identities=11% Similarity=0.057 Sum_probs=70.5
Q ss_pred ceeEEEccCC-eEEEEECCCCEEEEEcCCCCccc--ccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC
Q 011435 77 PYKIRVSEDG-ELFAVDEVNSNIVKITPPLSQYS--RGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT 153 (486)
Q Consensus 77 P~GlAVd~dG-~LYVaD~~n~rI~kid~~g~~~~--~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 153 (486)
...++++++| +++++-..++.|..++....... ....+.+.. +.............-..|+++++|.++++-.
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPE----DPSNRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCC----CccccccccccCceEEEEEECCCCCEEEEee
Confidence 5789999998 77777777888999987643210 023333210 0000000000111456899999999666555
Q ss_pred CCCEEEEEcCC--C--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 154 LNLAIRKIGDA--G--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 154 ~n~rIrkid~~--G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
. +.|+.+|.. + +.++.+.........+ ......+.....++ ..++|..+++-..++.|+.++....
T Consensus 305 ~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~i~~~~~~~-~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 305 Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCS-LYENDCIFDKFECC-WNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp S-SEEEEEETTCCSSCSCCEESCGGGTTTHHH-HHHTSGGGCCCCEE-ECTTSSEEEEECSTTEEEEEETTTC
T ss_pred C-CeEEEEeCCCCccccceeeccccccccccc-cccccccccceEEE-ECCCCCEEEEeccCCEEEEEEcCCC
Confidence 5 899999864 3 4444432100000000 00000011112344 4556665566666677777776643
No 196
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=90.46 E-value=12 Score=35.69 Aligned_cols=115 Identities=9% Similarity=0.010 Sum_probs=67.0
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCccccc-EEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRG-RLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
...++++++|.++++-..++.|..+|..... .. ..+.+ ++ -..-..|+++++|.+.++=..
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~--~~~~~~~~------~h---------~~~v~~l~fs~~g~~l~s~~~- 234 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPD--QASSRFPV------DE---------EAKIKEVKFADNGYWMVVECD- 234 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTT--SCCEECCC------CT---------TSCEEEEEECTTSSEEEEEES-
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCC--CCccEEec------cC---------CCCEEEEEEeCCCCEEEEEeC-
Confidence 5788999999988887778899999876432 11 11111 01 124578999999985444333
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC-CCeEEEEECCC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG-NAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-n~rIr~id~~G 221 (486)
+.|+.+|... +.++.. +.+. ...+.. ..++ .+++|..+++-.+ ++.|+.++.+.
T Consensus 235 ~~v~iwd~~~~~~~~~~~~-------~~~~---~~~~~~-~~~~-~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 235 QTVVCFDLRKDVGTLAYPT-------YTIP---EFKTGT-VTYD-IDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp SBEEEEETTSSTTCBSSCC-------CBC--------CC-EEEE-ECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CeEEEEEcCCCCcceeecc-------cccc---cccccc-eEEE-ECCCCCEEEEecCCCCcEEEEEEcc
Confidence 3899998654 222211 0000 000111 2365 5777776666444 77788887654
No 197
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.37 E-value=13 Score=36.45 Aligned_cols=111 Identities=9% Similarity=0.030 Sum_probs=69.8
Q ss_pred cceeEEEccCCe-EEEEEC--CCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEE-
Q 011435 76 VPYKIRVSEDGE-LFAVDE--VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVA- 151 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~--~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA- 151 (486)
....+++.++|. ++++.. .++.|..++..... ....+.. -.....++++++|..+++
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~--~~~~~~~-----------------~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA--RVNTVDA-----------------GSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC--EEEEEEC-----------------SSCEEEEEECSSSSEEEEE
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC--EEEEEeC-----------------CCcEEEEEECCCCCeEEEE
Confidence 357889988764 777644 57889989876432 1111111 013678999999986655
Q ss_pred -eCCCCEEEEEcCCC--ceE---EcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 152 -DTLNLAIRKIGDAG--VTT---IAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 152 -D~~n~rIrkid~~G--v~t---iaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
-..++.|+.++... ... +.+. -.....++ ..++|.++++-..++.|+.++....
T Consensus 322 ~g~~dg~i~v~~~~~~~~~~~~~~~~h----------------~~~v~~~~-~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 322 HGFPDNNLSIWSYSSSGLTKQVDIPAH----------------DTRVLYSA-LSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp ECTTTCEEEEEEEETTEEEEEEEEECC----------------SSCCCEEE-ECTTSSEEEEECTTSEEEEEECCC-
T ss_pred eecCCCcEEEEecCCccceeEEEecCC----------------CCCEEEEE-ECCCCCEEEEEeCCCcEEEEECCCC
Confidence 33578888887544 221 2121 11245666 5778888888888889999988753
No 198
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.36 E-value=3.5 Score=41.27 Aligned_cols=120 Identities=12% Similarity=0.018 Sum_probs=73.0
Q ss_pred cceeEEEccC-CeEEEEECCCCEEEEEcCCCCc--------ccccEEEecccCCccccCCCCccccccCCcceEEEcCCC
Q 011435 76 VPYKIRVSED-GELFAVDEVNSNIVKITPPLSQ--------YSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG 146 (486)
Q Consensus 76 ~P~GlAVd~d-G~LYVaD~~n~rI~kid~~g~~--------~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG 146 (486)
.+..|++.++ ++++++-..++.|..++..... ......+.+. -....+|++++++
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH----------------QKEGYGLSWNPNL 193 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----------------SSCCCCEEECTTS
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC----------------CCCeEEEEeCCCC
Confidence 4788999997 6788777778888888865210 0111122221 1246789999988
Q ss_pred C-EEEEeCCCCEEEEEcCCC---c-eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 147 N-LYVADTLNLAIRKIGDAG---V-TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 147 ~-LYVAD~~n~rIrkid~~G---v-~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
. ++++-..++.|+.++... . ..+.... .+ ...-....++++...++.++++...++.|+.++...
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----~~------~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKN----IF------TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSE----EE------CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceeccce----ee------cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 7 777767778888888654 1 1110000 00 000112456765444778888888889999999874
No 199
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=90.24 E-value=1.3 Score=46.15 Aligned_cols=116 Identities=10% Similarity=-0.036 Sum_probs=66.5
Q ss_pred eeEEEccCCeEEE-E-E-CCC-CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEe
Q 011435 78 YKIRVSEDGELFA-V-D-EVN-SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVAD 152 (486)
Q Consensus 78 ~GlAVd~dG~LYV-a-D-~~n-~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 152 (486)
..+++++||+.++ + + ..+ ..|++++.+++ ..+.+.+. .+ ....+++++||. |+.++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g---~~~~l~~~----~~------------~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG---GLRVFDSG----EG------------SFSSASISPGMKVTAGLE 213 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC---CCEEECCS----SC------------EEEEEEECTTSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC---CceEeecC----CC------------ccccceECCCCCEEEEcc
Confidence 6788999998444 2 2 222 56899997653 24444432 11 236899999998 66555
Q ss_pred CCC-CEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 153 TLN-LAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~n-~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
..+ .+|+++|.++ .. +..+.. +...... -..+...+ .+++|.||++-..+++++.++. |.
T Consensus 214 ~~~~~~i~~~d~~~~~~~-~~~~~~---~~~~~~~----~~~~~~~~-~spdg~~~~~~~~~g~~~l~~~-g~ 276 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVE-DLELPS---KDFSSYR----PTAITWLG-YLPDGRLAVVARREGRSAVFID-GE 276 (582)
T ss_dssp CSSCEEEEEECTTTCCEE-ECCCSC---SHHHHHC----CSEEEEEE-ECTTSCEEEEEEETTEEEEEET-TE
T ss_pred CCCeeEEEEEcCCCCcEE-EccCCC---cChhhhh----hcccccee-EcCCCcEEEEEEcCCcEEEEEE-CC
Confidence 433 3899999876 33 322110 0000000 00011222 4677788888877788888887 54
No 200
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=90.19 E-value=3.5 Score=43.52 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=45.2
Q ss_pred ceeEEEccCCe-EEEEECC-------CCEEEEEcCCC-CcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC
Q 011435 77 PYKIRVSEDGE-LFAVDEV-------NSNIVKITPPL-SQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN 147 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~-------n~rI~kid~~g-~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~ 147 (486)
..++++++||+ |+++... ...|+.++.++ +.......+.... -.....+++++||.
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~---------------~~~~~~~~~spdg~ 254 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP---------------EEAIAQAEWAPDGS 254 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET---------------TBCEEEEEECTTSC
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC---------------CceEcceEECCCCe
Confidence 35678999997 6555432 24788888762 2111233333210 11456889999999
Q ss_pred EEEEeCCCC--EEEEEcCCC
Q 011435 148 LYVADTLNL--AIRKIGDAG 165 (486)
Q Consensus 148 LYVAD~~n~--rIrkid~~G 165 (486)
||++-..++ +|++++.++
T Consensus 255 l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp EEEEECTTSSCEEEEECTTT
T ss_pred EEEEECCCCCeEEEEEECCC
Confidence 766654444 899998744
No 201
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.17 E-value=9.9 Score=35.38 Aligned_cols=116 Identities=13% Similarity=0.063 Sum_probs=68.5
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..|+++++|+++++-..++.|..++..... ....+.+. .....+++.+++.+.++- .++
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~-~d~ 277 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGG-----------------DIINALCFSPNRYWLCAA-TGP 277 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTE--EEEEEECS-----------------SCEEEEEECSSSSEEEEE-ETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCc--eeeeecCC-----------------ceEEeeecCCCCceeecc-CCC
Confidence 4688999999988877778899998876421 11111111 124577888887766554 357
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
.|+.+|..+ +..+..... .. .....-..-..++ ..++|+++++-..++.|+.+++.
T Consensus 278 ~i~iwd~~~~~~~~~~~~~~~---~~----~~~~h~~~v~~l~-~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 278 SIKIWDLEGKIIVDELKQEVI---ST----SSKAEPPQCTSLA-WSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EEEEEETTTTEEEEEECCC--------------CCCCCEEEEE-ECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCCeEEEeccccce---ee----eccCCCCCEEEEE-ECCCCCEEEEEeCCCEEEEEeCC
Confidence 888888766 233322100 00 0000111224565 57788877777777888888765
No 202
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=89.99 E-value=2.3 Score=40.48 Aligned_cols=123 Identities=11% Similarity=0.056 Sum_probs=67.8
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccc--cCCCCc---cccccCCcceEEEcCCCCEEE
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTG--HVDGKP---NEARFNHPKGVTMDDKGNLYV 150 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G--~~dG~~---~~a~Ln~P~GIavD~dG~LYV 150 (486)
....+++.++|+++++-..++.|..++.......... . ....+ ...+.. ....-.....|+++++|++++
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 218 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP---A--PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA 218 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCC---C--CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE
T ss_pred CeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccc---c--ccccccccchhhheEecCCCCCeEEEEEECCCCCEEE
Confidence 3578899999987777667778888885311000000 0 00000 000000 001112457899999998666
Q ss_pred EeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 151 ADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 151 AD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
+=..++.|+.+|... +.++.+.. .....++ ..+++.++++- .++.|+.++...
T Consensus 219 ~~~~d~~i~i~d~~~~~~~~~~~~~~----------------~~v~~~~-~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 219 WVSHDSTVCLADADKKMAVATLASET----------------LPLLAVT-FITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEETTTEEEEEEGGGTTEEEEEECSS----------------CCEEEEE-EEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEeCCCEEEEEECCCCceeEEEccCC----------------CCeEEEE-EecCCCEEEEE-eCCeEEEEEccC
Confidence 655678999998653 44443321 1134565 45567666665 667777777654
No 203
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=89.76 E-value=14 Score=35.19 Aligned_cols=110 Identities=9% Similarity=0.057 Sum_probs=66.1
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC------CCCEEE
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD------KGNLYV 150 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~------dG~LYV 150 (486)
-..++++++|.++++-...+.|..++..+.. ...+.+. . ..-..+++.+ ++.+++
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~---~~~~~~h----~------------~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIKGQC---LATLLGH----N------------DWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTSCE---EEEECCC----S------------SCEEEEEECCC------CCEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---EEEEecc----C------------CcEEEEEEccCCCCCCCccEEE
Confidence 4678898999888887778888888876421 2222221 0 0123445544 344555
Q ss_pred EeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 151 ADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 151 AD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+-..++.|+..|... ...+.+.. ..-..++ ..++|.++++-..++.|+.++....
T Consensus 171 s~~~d~~i~~wd~~~~~~~~~~~~h~----------------~~v~~~~-~sp~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQFQIEADFIGHN----------------SNINTLT-ASPDGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCC----------------SCEEEEE-ECTTSSEEEEEETTCEEEEEETTTT
T ss_pred EEeCCCEEEEEECCcchhheeecCCC----------------CcEEEEE-EcCCCCEEEEEeCCCeEEEEECCCC
Confidence 555677888888665 23333210 1123455 5677777777777788888887754
No 204
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=89.71 E-value=5.9 Score=38.67 Aligned_cols=114 Identities=6% Similarity=-0.029 Sum_probs=64.2
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..|++.++|.++++.. .+.|...+.............. .++ -..-..|++.++|+++++=..++
T Consensus 97 V~~~~~s~d~~~l~~s~-dg~v~lWd~~~~~~~~~~~~~~-----~~h---------~~~V~~v~~spdg~~l~sgs~dg 161 (357)
T 4g56_B 97 VTDVAWVSEKGILVASD-SGAVELWEILEKESLLVNKFAK-----YEH---------DDIVKTLSVFSDGTQAVSGGKDF 161 (357)
T ss_dssp EEEEEEETTTEEEEEET-TSCEEEC--------CCCCEEE-----CCC---------SSCEEEEEECSSSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEC-CCEEEEeeccccceeEEEeecc-----CCC---------CCCEEEEEECCCCCEEEEEeCCC
Confidence 35788999998887754 5677777754221000000000 011 11346899999999766655678
Q ss_pred EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+.+|... +..+.+.. .....+++...+..++++-..++.|+.++...
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~----------------~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHS----------------SEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp CEEEEETTTTEEEEEECCCS----------------SCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred eEEEEECCCCcEEEEEcCCC----------------CCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 899998765 34443210 11345654333345777777778888888764
No 205
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.67 E-value=11 Score=40.40 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=65.5
Q ss_pred ceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC--CCCEEEEeC
Q 011435 77 PYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD--KGNLYVADT 153 (486)
Q Consensus 77 P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYVAD~ 153 (486)
...+++++ +|+++++-..++.|..++..... ....+.+. .-.....+++.+ +|.++++-.
T Consensus 143 v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~---------------~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQST--PNFTLTTG---------------QERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTCSS--CSEEEECC---------------CTTCCCEEEECCSTTCCEEEEEC
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--ceeEEecC---------------CCCCEEEEEEEECCCCCEEEEEe
Confidence 47788888 78777777777888888875332 11222211 012356788888 888777767
Q ss_pred CCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 154 LNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 154 ~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.++.|+.+|... +.++.+.. .....++ ..++|.++++-..++.|+.++...
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~~~----------------~~v~~~~-~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEGHM----------------SNVSFAV-FHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCS----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEECCCCcEEEEEcCCC----------------CCEEEEE-EcCCCCEEEEEeCCCeEEEEECCC
Confidence 788999998654 44443321 1122343 345555555555555666666553
No 206
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=89.58 E-value=4.1 Score=37.54 Aligned_cols=112 Identities=9% Similarity=0.022 Sum_probs=65.1
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcc--cccEEEecccCCccccCCCCccccccCCcceEEEcC--CCCEEEEe
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQY--SRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD--KGNLYVAD 152 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~--~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYVAD 152 (486)
-..|+++++|+++++-..++.|..++...... .....+.+. -.....|++.+ +|+++++=
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH----------------DSSIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC----------------SSCEEEEEECCGGGCSEEEEE
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC----------------CCcEEEEEEcCCCCCCEEEEE
Confidence 47889999999777767778888887653210 001111121 11356888887 57766655
Q ss_pred CCCCEEEEEcCCC------------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCC--CeEEEEeCCCCeEEEEE
Q 011435 153 TLNLAIRKIGDAG------------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT--CSLLVIDRGNAALRQIS 218 (486)
Q Consensus 153 ~~n~rIrkid~~G------------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~--G~LYVaD~gn~rIr~id 218 (486)
..++.|+.+|... +..+.+. -.....++ ..++ +.++++-..++.|+.++
T Consensus 78 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~----------------~~~v~~~~-~~~~~~~~~l~~~~~dg~v~iwd 140 (351)
T 3f3f_A 78 SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS----------------KGSLYSVK-FAPAHLGLKLACLGNDGILRLYD 140 (351)
T ss_dssp ETTSCEEEEEECTTSCTTSSCSEEEEEEECCC----------------SSCEEEEE-ECCGGGCSEEEEEETTCEEEEEE
T ss_pred cCCCeEEEEecCCCcccccccCcceeeeeccc----------------CCceeEEE-EcCCCCCcEEEEecCCCcEEEec
Confidence 5567777777543 1122111 01134555 4555 66666666677888888
Q ss_pred CCC
Q 011435 219 LNQ 221 (486)
Q Consensus 219 ~~G 221 (486)
...
T Consensus 141 ~~~ 143 (351)
T 3f3f_A 141 ALE 143 (351)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 207
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=89.40 E-value=2.3 Score=41.30 Aligned_cols=113 Identities=16% Similarity=0.151 Sum_probs=67.3
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..|+++++|.++++-..++.|...+..+... ....... .|+ -..-..|+++++|+++++=..++
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-~~~~~~~-----~~h---------~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-ICKSVLS-----EGH---------QRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEE-EEEEEEC-----SSC---------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-eeeeeec-----ccc---------CCcEEEEEECCCCCEEEEEECCC
Confidence 36789999999888777778888887653210 0011111 111 11346899999999666555556
Q ss_pred EEEEEcCCC-----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG-----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G-----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+..+.+. +.++.+.. ..-..++ ..++|+++++-..++.|+.++...
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~----------------~~v~~v~-~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHE----------------NEVKSVA-WAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCS----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEEECT
T ss_pred cEEEEEccCCCeEEEEEccCCC----------------CCceEEE-EeCCCCEEEEEECCCeEEEEECCC
Confidence 666665332 23333210 1124565 466777777777777888887754
No 208
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.31 E-value=16 Score=35.67 Aligned_cols=70 Identities=9% Similarity=0.004 Sum_probs=41.2
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC--C
Q 011435 136 HPKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR--G 210 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~--g 210 (486)
...+++++++|+++++-..++.|+.+|... +.++.+.. .....+++...+..|+++-. .
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~----------------~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN----------------AAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS----------------SCCCEEEECTTSTTEEEEECCTT
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc----------------ceEEEEEECCCCCCEEEEecCCC
Confidence 457899999998666655678899998765 33443221 11234553333345555543 4
Q ss_pred CCeEEEEECCC
Q 011435 211 NAALRQISLNQ 221 (486)
Q Consensus 211 n~rIr~id~~G 221 (486)
++.|+.++...
T Consensus 283 d~~i~i~d~~~ 293 (401)
T 4aez_A 283 DKQIHFWNAAT 293 (401)
T ss_dssp TCEEEEEETTT
T ss_pred CCEEEEEECCC
Confidence 56666666654
No 209
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=89.04 E-value=5.3 Score=38.88 Aligned_cols=107 Identities=7% Similarity=0.114 Sum_probs=66.4
Q ss_pred EEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCEEEE
Q 011435 81 RVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAIRK 160 (486)
Q Consensus 81 AVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrk 160 (486)
++.++|+++++-..++.|..++..... ...... + .-.....|+++++|+++++=..++.|+.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~------~---------h~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNL---QREIDQ------A---------HVSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCE---EEEETT------S---------SSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcc---eeeecc------c---------ccCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 556788877776677788888876321 111110 1 1124578999999986666566788999
Q ss_pred EcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 161 IGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 161 id~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+|... +.++.+.. .....++ ..+++.++++-..++.|+.++....
T Consensus 166 wd~~~~~~~~~~~~h~----------------~~v~~~~-~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGHR----------------ATVTDIA-IIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp EETTTCCCCEEEECCS----------------SCEEEEE-EETTTTEEEEEETTSCEEEEETTTT
T ss_pred EeCCCCcCceEEcCCC----------------CcEEEEE-EcCCCCEEEEEcCCCcEEEeECCCC
Confidence 98654 45553321 1134565 3556666666666777888887643
No 210
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=88.76 E-value=17 Score=34.79 Aligned_cols=111 Identities=10% Similarity=0.027 Sum_probs=65.3
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCC----------
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG---------- 146 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG---------- 146 (486)
-..++++++|+.+++-...+.|..++..+. ....... ..++ -..-..+++++++
T Consensus 121 v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~---~~~~---------~~~v~~~~~~~~~~~~~~~~~~~ 184 (343)
T 2xzm_R 121 VYSVAFSPDNRQILSAGAEREIKLWNILGE----CKFSSAE---KENH---------SDWVSCVRYSPIMKSANKVQPFA 184 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSCEEEEESSSC----EEEECCT---TTSC---------SSCEEEEEECCCCCSCSCCCSSC
T ss_pred EEEEEECCCCCEEEEEcCCCEEEEEeccCC----ceeeeec---ccCC---------CceeeeeeeccccccccccCCCC
Confidence 467889999887776666778888886521 1111110 0010 0112355555554
Q ss_pred CEEEEeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 147 NLYVADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 147 ~LYVAD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
.++++=..++.|+.+|..+ ..++.+.. .....++ ..++|.++++-..++.|+.++..
T Consensus 185 ~~l~s~~~d~~i~iwd~~~~~~~~~~~h~----------------~~v~~~~-~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 185 PYFASVGWDGRLKVWNTNFQIRYTFKAHE----------------SNVNHLS-ISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CEEEEEETTSEEEEEETTTEEEEEEECCS----------------SCEEEEE-ECTTSSEEEEEETTCEEEEEESS
T ss_pred CEEEEEcCCCEEEEEcCCCceeEEEcCcc----------------ccceEEE-ECCCCCEEEEEcCCCeEEEEECC
Confidence 5555555678888888665 33333210 1134565 57788877777788889999874
No 211
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=88.48 E-value=16 Score=33.98 Aligned_cols=76 Identities=9% Similarity=0.135 Sum_probs=46.9
Q ss_pred ceeEEEccC-CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSED-GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~d-G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
=.+|+++|+ |+++++-...+.|...+....... ........ .|+ -.....++++++|++.++=..+
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~-~~~~~~~l---~~h---------~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETN-YGIPQRAL---RGH---------SHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC-SEEEEEEE---CCC---------SSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc-cceeeEEE---eCC---------CCCEEEEEECCCCCEEEEEccc
Confidence 478999986 678887777777877775432110 11111110 011 1245689999999966665567
Q ss_pred CEEEEEcCCC
Q 011435 156 LAIRKIGDAG 165 (486)
Q Consensus 156 ~rIrkid~~G 165 (486)
+.|+..+...
T Consensus 108 ~~i~~~~~~~ 117 (340)
T 4aow_A 108 GTLRLWDLTT 117 (340)
T ss_dssp SEEEEEETTT
T ss_pred ccceEEeecc
Confidence 8888887665
No 212
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=88.37 E-value=8.7 Score=41.03 Aligned_cols=116 Identities=15% Similarity=0.096 Sum_probs=69.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCC--CEEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG--NLYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG--~LYVAD~~ 154 (486)
-.+++++++|+.+++-...+.|...+..+.. ...+.. ...++ -..-..+++++++ .++++-..
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~---~~~~~~---~~~~h---------~~~v~~~~~~~~~~~~~l~s~s~ 539 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGEC---KYTISE---GGEGH---------RDWVSCVRFSPNTLQPTIVSASW 539 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCE---EEEECS---STTSC---------SSCEEEEEECSCSSSCEEEEEET
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCc---ceeecc---CCCCC---------CCcEEEEEEeCCCCcceEEEEeC
Confidence 3577888888876766667778887764321 111111 01111 1124578888876 45565556
Q ss_pred CCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCCce
Q 011435 155 NLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQDDC 224 (486)
Q Consensus 155 n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~~~ 224 (486)
++.|+.+|... +.++.+.. .....++ ..++|+++++-..++.|+.++.....+
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~----------------~~v~~v~-~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHT----------------GYVSTVA-VSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCS----------------SCEEEEE-ECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred CCeEEEEECCCCcEEEEEcCCC----------------CCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 77888888655 34443320 1124565 577888888888888899998875433
No 213
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=87.93 E-value=18 Score=34.58 Aligned_cols=111 Identities=8% Similarity=-0.026 Sum_probs=70.2
Q ss_pred ceeEEEcc--CCeEEEEECCCCEEEEEcCCCCcccccEEEe-cccCCccccCCCCccccccCCcceEEEcCCCCEEEEeC
Q 011435 77 PYKIRVSE--DGELFAVDEVNSNIVKITPPLSQYSRGRLVA-GSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADT 153 (486)
Q Consensus 77 P~GlAVd~--dG~LYVaD~~n~rI~kid~~g~~~~~~~~va-G~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 153 (486)
-..+++++ +|+++++-..++.|..+|..... ...+. +. .-.....++++++|.++++=.
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~---~~~~~~~~---------------~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS---QYIVHSAK---------------SDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSC---EEEEECCC---------------SSCCCCEEEECTTSCEEEEEC
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc---EEEEEecC---------------CCCceEEEEECCCCCEEEEEc
Confidence 47788889 89988877778889999876432 21111 11 011356899999999888766
Q ss_pred CCCEEEEEcCCC---c-eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 154 LNLAIRKIGDAG---V-TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 154 ~n~rIrkid~~G---v-~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.++.|+.+|... + .++.++. -.....++ ..++|..+++-..+ .|+.+++...
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h---------------~~~v~~l~-fs~~g~~l~s~~~~-~v~iwd~~~~ 245 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDE---------------EAKIKEVK-FADNGYWMVVECDQ-TVVCFDLRKD 245 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCT---------------TSCEEEEE-ECTTSSEEEEEESS-BEEEEETTSS
T ss_pred CCCEEEEEECCCCCCCccEEeccC---------------CCCEEEEE-EeCCCCEEEEEeCC-eEEEEEcCCC
Confidence 778999998654 2 3443210 01234666 45666555554444 8999998764
No 214
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=87.84 E-value=9.9 Score=38.00 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=68.4
Q ss_pred ceeEEEccCCeE-EEEECCCCEEEEEcCC--CCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEe
Q 011435 77 PYKIRVSEDGEL-FAVDEVNSNIVKITPP--LSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVAD 152 (486)
Q Consensus 77 P~GlAVd~dG~L-YVaD~~n~rI~kid~~--g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 152 (486)
..+++++++|.. +++-..++.|..++.. +.. ....+.+. + .-..+..|+++++|+ |++++
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--~~~~~~~~-----~---------~~~~v~~~~~sp~~~~l~~~~ 168 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--VLKLRKRF-----C---------FSKRPNAISIAEDDTTVIIAD 168 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--CEEEEEEE-----E---------CSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--eeeeeecc-----c---------CCCCceEEEEcCCCCEEEEEe
Confidence 578999999985 5776667888888765 321 12222211 0 012468999999998 56665
Q ss_pred CCCCEEEEEcCCC---ce----EEcCCCCCCCCcCCCCccccccCCCceeEEEcCC---CeEEEEeCCCCeEEEEECCCC
Q 011435 153 TLNLAIRKIGDAG---VT----TIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT---CSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 153 ~~n~rIrkid~~G---v~----tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~---G~LYVaD~gn~rIr~id~~G~ 222 (486)
. .+.|+.++... .. ++.+ .-.....+++ .++ +.++++-..++.|+.++....
T Consensus 169 ~-~g~v~~~~~~~~~~~~~~~~~~~~----------------h~~~v~~~~~-sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 169 K-FGDVYSIDINSIPEEKFTQEPILG----------------HVSMLTDVHL-IKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp T-TSEEEEEETTSCCCSSCCCCCSEE----------------CSSCEEEEEE-EECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred C-CCcEEEEecCCcccccccceeeec----------------ccCceEEEEE-cCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 4 67888887543 11 1111 1122456664 455 666666666788888887643
No 215
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.81 E-value=7.9 Score=41.09 Aligned_cols=116 Identities=9% Similarity=0.044 Sum_probs=63.9
Q ss_pred cceeEEEccCCe-EEEEECCC----CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC--CCC-
Q 011435 76 VPYKIRVSEDGE-LFAVDEVN----SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD--KGN- 147 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~~n----~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~- 147 (486)
.+..+++++||+ |+++.... ..|+.++..+.. ....+... ...+ ..+....+++++ +|.
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~--~~~~---------~~~~~~~~~~sp~~dg~~ 325 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVE--TDKH---------YVEPLHPLTFLPGSNNQF 325 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEE--ECSS---------CCCCCSCCEECTTCSSEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEc--cCCC---------eECccCCceeecCCCCEE
Confidence 357899999998 66644322 378889887531 22333221 0000 111235789998 888
Q ss_pred EEEEeCC-CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCce-eEEEcCCC-eEEEEeCCCC----eEEEEE
Q 011435 148 LYVADTL-NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFD-VVYVRPTC-SLLVIDRGNA----ALRQIS 218 (486)
Q Consensus 148 LYVAD~~-n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~g-Ia~vd~~G-~LYVaD~gn~----rIr~id 218 (486)
||+++.. ..+|+.++.++ +..+.++.. .-.. ++ .+++| .||++...++ +|++++
T Consensus 326 l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~----------------~v~~~~~-~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 326 IWQSRRDGWNHLYLYDTTGRLIRQVTKGEW----------------EVTNFAG-FDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp EEEECTTSSCEEEEEETTSCEEEECCCSSS----------------CEEEEEE-ECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred EEEEccCCccEEEEEECCCCEEEecCCCCe----------------EEEeeeE-EcCCCCEEEEEecCCCCceEEEEEEE
Confidence 4555443 35788888655 445433210 0112 33 44554 5777665544 777777
Q ss_pred CCC
Q 011435 219 LNQ 221 (486)
Q Consensus 219 ~~G 221 (486)
.++
T Consensus 389 ~~~ 391 (706)
T 2z3z_A 389 IKG 391 (706)
T ss_dssp TTC
T ss_pred cCC
Confidence 654
No 216
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=87.70 E-value=19 Score=34.11 Aligned_cols=111 Identities=14% Similarity=0.149 Sum_probs=68.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..+++.++|.++++-...+.|...|..... ....+.|. -..-..|+++++|.++++=..++
T Consensus 68 v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~--~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~s~D~ 129 (319)
T 3frx_A 68 VQDCTLTADGAYALSASWDKTLRLWDVATGE--TYQRFVGH----------------KSDVMSVDIDKKASMIISGSRDK 129 (319)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECC----------------SSCEEEEEECTTSCEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCC--eeEEEccC----------------CCcEEEEEEcCCCCEEEEEeCCC
Confidence 3678899999988877778899999976432 12233332 11346889999999777766778
Q ss_pred EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEE-----cCCCeEEEEeCCCCeEEEEECCC
Q 011435 157 AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYV-----RPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 157 rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~v-----d~~G~LYVaD~gn~rIr~id~~G 221 (486)
.|+..|..+ +.++.+... .-..+.+. +.++.++++-..++.|+.+++..
T Consensus 130 ~i~vwd~~~~~~~~~~~h~~----------------~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 185 (319)
T 3frx_A 130 TIKVWTIKGQCLATLLGHND----------------WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ 185 (319)
T ss_dssp CEEEEETTSCEEEEECCCSS----------------CEEEEEECCC------CCEEEEEETTSCEEEEETTT
T ss_pred eEEEEECCCCeEEEEeccCC----------------cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc
Confidence 899998877 455543210 01122211 12344556666667777777764
No 217
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=87.26 E-value=15 Score=35.68 Aligned_cols=125 Identities=10% Similarity=-0.010 Sum_probs=71.6
Q ss_pred ceeEEEccCCeEEEEECCCCE-EEEEcCCCCcccccEEEe-cccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSN-IVKITPPLSQYSRGRLVA-GSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~r-I~kid~~g~~~~~~~~va-G~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
-..|++++||.++++-...+. |..+|..... ....+. |. + -..-..|+++++|+++++=..
T Consensus 198 v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~--~~~~~~~g~------h---------~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV--LVREFRRGL------D---------RADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp EEEEEECTTSSEEEEEETTCSEEEEEETTTCC--EEEEEECTT------C---------CSCEEEEEECTTSCEEEEEET
T ss_pred eEEEEECCCCCEEEEEeCCCCEEEEEECCCCc--EEEEEEcCC------C---------CCcEEEEEECCCCCEEEEEEC
Confidence 478999999998888777887 8888876322 122222 20 0 113568999999997777667
Q ss_pred CCEEEEEcCCC-----ceEEcCCCCCCCCcCCCCc--cccccC----CCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 155 NLAIRKIGDAG-----VTTIAGGKSNVAGFRDGPS--EDAKFS----NDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 155 n~rIrkid~~G-----v~tiaGg~~g~~G~~DG~~--~~a~f~----~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
++.|+.+|... ...+.+- ....+.+... ....+. .+..++...++|+.+++-..++++++++..
T Consensus 261 d~~v~iw~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 261 KWTLHVFEIFNDQDNKRHALKGW--INMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp TCEEEEEESSCCSCCCSEETTTT--EECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEEccCCCCcccccccce--eeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 78898888543 1111110 0000100000 000011 111333467888777777778888887754
No 218
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.24 E-value=3.1 Score=39.06 Aligned_cols=113 Identities=7% Similarity=-0.026 Sum_probs=67.5
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCccc-ccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYS-RGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~-~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~ 154 (486)
-.+++++++|.++++-..++.|..++.+..... ......+. -.....++++++|+ ++++=..
T Consensus 14 v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~l~~~~~ 77 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY----------------KHPLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC----------------SSCEEEEEEEESSSEEEEEEET
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeec----------------CCceEEEEECCCCCcEEEEEcC
Confidence 477889899886666666778888776532100 01222221 11457899999999 5555445
Q ss_pred CCEEEEEcC-CC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 155 NLAIRKIGD-AG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 155 n~rIrkid~-~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
++.|+.++. .+ ...+.+.. . -.....+++.. +.++++-..++.|+.++...
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~-----~---------~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNE-----A---------NLGICRICKYG--DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCC-----C---------CSCEEEEEEET--TTEEEEEETTSEEEEECHHH
T ss_pred CCeEEEEEeccCCceEeccccC-----C---------CCceEEEEeCC--CCEEEEEcCCCeEEEEcccc
Confidence 788999987 65 33332200 0 01234566444 66666666778888888653
No 219
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=87.21 E-value=7.3 Score=41.11 Aligned_cols=117 Identities=13% Similarity=0.030 Sum_probs=73.9
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
....+++++||.++++-..++.|..++..+........ .+. -...+.|+++++|.+.++-..+
T Consensus 450 ~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h----------------~~~v~~v~fspdg~~las~s~d 512 (611)
T 1nr0_A 450 NSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVH----------------PAEITSVAFSNNGAFLVATDQS 512 (611)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EEC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred CceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCC----------------CCceEEEEECCCCCEEEEEcCC
Confidence 46789999999988887788888888865321000111 111 1135789999999976666667
Q ss_pred CEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
+.|+.++... ...+... ..+ ..-..-..++ ..++|.++++-...+.|+..+.+.
T Consensus 513 ~~v~~w~~~~~~~~~~~~---~~~--------~H~~~V~~v~-fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 513 RKVIPYSVANNFELAHTN---SWT--------FHTAKVACVS-WSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp SCEEEEEGGGTTEESCCC---CCC--------CCSSCEEEEE-ECTTSSEEEEEETTSCEEEEETTC
T ss_pred CCEEEEEcCCCCceeeee---eee--------ecccceeEEE-ECCCCCEEEEEECCCcEEEEECCC
Confidence 8888887543 1111100 000 0011234676 578888888888888999999875
No 220
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.98 E-value=15 Score=38.60 Aligned_cols=84 Identities=10% Similarity=0.080 Sum_probs=48.4
Q ss_pred cceeEEEccCCeEEEEECCCC--EEEEEcCCCCcccccEEEecccCCccccCCCCccccccC-CcceEEEcCCCCEEEEe
Q 011435 76 VPYKIRVSEDGELFAVDEVNS--NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFN-HPKGVTMDDKGNLYVAD 152 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~--rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln-~P~GIavD~dG~LYVAD 152 (486)
....+++++||+||++...++ +|++++.+++ ....+... ... .....+. ....+++.++|.++++-
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~---~~~~l~~~---~~~-----~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATG---AATQLCRR---EEE-----FAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTTC---CEEESSCC---SSB-----SSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCCC---ceeecccc---ccc-----ccCccccccCceEeEeCCCEEEEEE
Confidence 367889999999777665555 8999987543 22222221 000 0000010 13468888888866554
Q ss_pred C-CCCEEEEEcCCC--ceEEc
Q 011435 153 T-LNLAIRKIGDAG--VTTIA 170 (486)
Q Consensus 153 ~-~n~rIrkid~~G--v~tia 170 (486)
. +..+|+.+|.++ +.++.
T Consensus 312 ~~~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 312 GKGAAVLGILDPESGELVDAA 332 (662)
T ss_dssp BSSSCEEEEEETTTTEEEECC
T ss_pred EcCccEEEEEECCCCcEEEec
Confidence 3 455778888764 55543
No 221
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=86.80 E-value=4.5 Score=38.29 Aligned_cols=112 Identities=10% Similarity=0.028 Sum_probs=60.0
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC--CCEEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK--GNLYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d--G~LYVAD~~ 154 (486)
-..++++++|.++++-..++.|..++.+.........+.+. -..-..|++.++ |+++++=..
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH----------------EGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC----------------SSCEEEEEECCGGGCSEEEEEET
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCC----------------CCcEEEEEeCCCCCCCEEEEecc
Confidence 47788999998777666677788877642110111112221 112357788755 775554445
Q ss_pred CCEEEEEcCCC-----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCC--CeEEEEeCCCCeEEEEECCC
Q 011435 155 NLAIRKIGDAG-----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT--CSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 155 n~rIrkid~~G-----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~--G~LYVaD~gn~rIr~id~~G 221 (486)
++.|+.+|... +..+.+. -.....++ ..++ +.++++-..++.|+.++...
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~-~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVH----------------SASVNSVQ-WAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCC----------------SSCEEEEE-ECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred CCEEEEEEcCCCceeEeeeecCC----------------CcceEEEE-eCCCCCCCEEEEecCCCcEEEEecCC
Confidence 67777776543 1222111 01123454 3444 55555555666777777654
No 222
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=86.57 E-value=21 Score=33.34 Aligned_cols=75 Identities=8% Similarity=0.033 Sum_probs=50.0
Q ss_pred cceeEEEcc-CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 76 VPYKIRVSE-DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 76 ~P~GlAVd~-dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
.-.++++.+ +|+++++-..++.|..++.... ......... .+ .-.....|+++++|+++++=..
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~---~~---------~~~~v~~~~~~~~~~~l~~~~~ 181 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTD---TLVAIFGGV---EG---------HRDEVLSADYDLLGEKIMSCGM 181 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTT---EEEEEECST---TS---------CSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecC---eEEEEeccc---cc---------ccCceeEEEECCCCCEEEEecC
Confidence 357899998 8887777777788999987632 122222110 01 1124678999999986666556
Q ss_pred CCEEEEEcCCC
Q 011435 155 NLAIRKIGDAG 165 (486)
Q Consensus 155 n~rIrkid~~G 165 (486)
++.|+.+|...
T Consensus 182 dg~i~i~d~~~ 192 (366)
T 3k26_A 182 DHSLKLWRINS 192 (366)
T ss_dssp TSCEEEEESCS
T ss_pred CCCEEEEECCC
Confidence 78899998764
No 223
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.48 E-value=23 Score=37.74 Aligned_cols=115 Identities=16% Similarity=0.134 Sum_probs=69.3
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-.+++++++|+++++-...+.|+.++..... ....+.|. -..-..|+++++|+.+++=..++
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~s~D~ 494 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAGV--STRRFVGH----------------TKDVLSVAFSLDNRQIVSASRDR 494 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECC----------------SSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCc--ceeEEeCC----------------CCCEEEEEEeCCCCEEEEEeCCC
Confidence 4678999999988887788899999976432 12223332 11346889999998666666678
Q ss_pred EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC--eEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC--SLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G--~LYVaD~gn~rIr~id~~G~ 222 (486)
.|+..|..+ ..++..... ++. ..-..++ ..+++ .++++-..++.|+.+++...
T Consensus 495 ~i~iwd~~~~~~~~~~~~~~---~h~---------~~v~~~~-~~~~~~~~~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 495 TIKLWNTLGECKYTISEGGE---GHR---------DWVSCVR-FSPNTLQPTIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp CEEEECTTSCEEEEECSSTT---SCS---------SCEEEEE-ECSCSSSCEEEEEETTSCEEEEETTTC
T ss_pred EEEEEECCCCcceeeccCCC---CCC---------CcEEEEE-EeCCCCcceEEEEeCCCeEEEEECCCC
Confidence 899998766 233322111 110 1122344 23333 45555556677777777643
No 224
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.44 E-value=25 Score=35.71 Aligned_cols=114 Identities=11% Similarity=-0.005 Sum_probs=66.5
Q ss_pred cceeEEEccCCeEEEEECC-CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 76 VPYKIRVSEDGELFAVDEV-NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~-n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
.+..+++. |.++++-.. ++.|..++.... ........ + .-.....|+++++|.++++=..
T Consensus 448 ~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~-----~~~~~~~~---~---------~~~~v~~~~~s~~g~~l~~~~~ 508 (615)
T 1pgu_A 448 PGSAVSLS--QNYVAVGLEEGNTIQVFKLSDL-----EVSFDLKT---P---------LRAKPSYISISPSETYIAAGDV 508 (615)
T ss_dssp CEEEEEEC--SSEEEEEETTTSCEEEEETTEE-----EEEEECSS---C---------CSSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEc--CCEEEEeecCCCeEEEEECCCc-----cccccccC---C---------ccCceEEEEECCCCCEEEEcCC
Confidence 46778887 554444444 677888887531 11111110 1 1224678999999996666656
Q ss_pred CCEEEEEcCCCceEEcCCCCCCCCcCCCCccccccCCCceeEEEcC----------CCeEEEEeCCCCeEEEEECCC
Q 011435 155 NLAIRKIGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP----------TCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 155 n~rIrkid~~Gv~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~----------~G~LYVaD~gn~rIr~id~~G 221 (486)
++.|+.++...-..+..-. +. .-.....++ ..+ ++.++++-..++.|+.++...
T Consensus 509 dg~i~iw~~~~~~~~~~~~----~~--------h~~~v~~~~-~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 572 (615)
T 1pgu_A 509 MGKILLYDLQSREVKTSRW----AF--------RTSKINAIS-WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR 572 (615)
T ss_dssp TSCEEEEETTTTEEEECCS----CC--------CSSCEEEEE-ECCCC------CCSCCEEEEEETTSCEEEEESSC
T ss_pred CCeEEEeeCCCCcceeEee----cC--------CCCceeEEE-EcCccccccccccCCCEEEEEcCCCcEEEEECCC
Confidence 7889999875522221100 00 011234565 455 777777777778899998875
No 225
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=86.00 E-value=24 Score=33.50 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=48.5
Q ss_pred ceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
-.++++.++|. ++++-..++.|..++..... .....+... .+......-......-.....|+++++|+.+++-..+
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRAS-GCLITLDQH-NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSS-CCSEECCTT-TTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCC-ccccccccc-ccccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 46788999887 67666677788888875322 011111110 0000000000001122345789999999866655567
Q ss_pred CEEEEEcCCC
Q 011435 156 LAIRKIGDAG 165 (486)
Q Consensus 156 ~rIrkid~~G 165 (486)
+.|+.+|...
T Consensus 267 g~i~vwd~~~ 276 (408)
T 4a11_B 267 NRMRLWNSSN 276 (408)
T ss_dssp SCEEEEETTT
T ss_pred CeEEEEECCC
Confidence 8899888654
No 226
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.91 E-value=2.9 Score=40.33 Aligned_cols=125 Identities=15% Similarity=0.105 Sum_probs=61.1
Q ss_pred eeEEEccCCe-E-EEEECCCC---EEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 78 YKIRVSEDGE-L-FAVDEVNS---NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 78 ~GlAVd~dG~-L-YVaD~~n~---rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
..+++++||+ | |+++.... .|++++.+++. .+.+... .+.. .....+.++++.++|. |+++
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~---~~~l~~~-~~~~---------~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE---NRQLTSM-PACS---------HLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC---EEEEEEE-CCEE---------EEEECTTSSEEEEEECCC---
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCc---eEEEEcC-CCce---------eeeecCCCCeEccCCCcceeE
Confidence 3567889998 5 55554332 39999987543 2222211 1100 0112356667888887 4443
Q ss_pred e--------CCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeC--CCCeEEEEE
Q 011435 152 D--------TLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDR--GNAALRQIS 218 (486)
Q Consensus 152 D--------~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~--gn~rIr~id 218 (486)
- ..+..|+++|.++ +..+..... ......+ .+......++ ..++| .|+++.. +...|++++
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~----~~~~~~~~~~-~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 308 VQDDSGYKIENDPFLYVFNMKNGTQHRVARHDT-SWKVFEG----DRQVTHPHPS-FTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEEEEEECCC-CCCCBTT----BSSTTCCCCE-ECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eeeccccccCCCCEEEEEeccCCceEEeccccC-ccccccc----ccccCCCCcc-CCCCCCEEEEEecCCCceeEEEEE
Confidence 1 4567899998776 444543211 0000000 0001133455 35555 5665543 345677777
Q ss_pred CCC
Q 011435 219 LNQ 221 (486)
Q Consensus 219 ~~G 221 (486)
+..
T Consensus 382 l~~ 384 (388)
T 3pe7_A 382 LPE 384 (388)
T ss_dssp CCG
T ss_pred CCh
Confidence 653
No 227
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=85.70 E-value=12 Score=35.03 Aligned_cols=111 Identities=10% Similarity=0.083 Sum_probs=64.4
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC--CCCEEEEeCCC
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD--KGNLYVADTLN 155 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYVAD~~n 155 (486)
..++++++|+++++-..++.|..++.++.......++.|. .+ .-..|++.+ +|+++++=..+
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH----~~------------~V~~v~~s~~~~g~~l~s~s~D 76 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH----EG------------PVWRVDWAHPKFGTILASCSYD 76 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC----SS------------CEEEEEECCGGGCSEEEEEETT
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc----cC------------CeEEEEecCCCcCCEEEEEcCC
Confidence 6789999999888877788888888653211112233331 01 234677754 47776665667
Q ss_pred CEEEEEcCCC-----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCC--CeEEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG-----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT--CSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G-----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~--G~LYVaD~gn~rIr~id~~G 221 (486)
+.|+..|... +.++.+.. ..-..+++ .++ |.++++-..++.|+.++...
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~----------------~~v~~v~~-~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHS----------------ASVNSVQW-APHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCS----------------SCEEEEEE-CCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred CEEEEEEcCCCceEEEEEeecCC----------------CceeEEEe-CcCCCCcEEEEEECCCcEEEEEecC
Confidence 8888887543 22222210 01234553 333 55666666677788887764
No 228
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=85.34 E-value=9 Score=43.65 Aligned_cols=77 Identities=10% Similarity=0.080 Sum_probs=51.9
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-.++++++||.++++-..++.|..++..... ....+.+. -..-..|+++++|++.++=..++
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~--~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~~~d~ 679 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAETGE--KLLDIKAH----------------EDEVLCCAFSSDDSYIATCSADK 679 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCC--EEEEeccC----------------CCCEEEEEEecCCCEEEEEeCCC
Confidence 4788999999977776777889999876432 12222221 11356899999998666655678
Q ss_pred EEEEEcCCC---ceEEcC
Q 011435 157 AIRKIGDAG---VTTIAG 171 (486)
Q Consensus 157 rIrkid~~G---v~tiaG 171 (486)
.|+.+|... +.++.+
T Consensus 680 ~v~vwd~~~~~~~~~~~~ 697 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDE 697 (1249)
T ss_dssp EEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCceEEEEcC
Confidence 899998654 445443
No 229
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=85.31 E-value=8.8 Score=37.01 Aligned_cols=122 Identities=10% Similarity=0.049 Sum_probs=69.4
Q ss_pred ceeEEEccC-CeEEEEECCCCEEEEEcCCCCcccc---cEEEecccCCccccCCCCccccccCCcceEEEcCC-CCEEEE
Q 011435 77 PYKIRVSED-GELFAVDEVNSNIVKITPPLSQYSR---GRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK-GNLYVA 151 (486)
Q Consensus 77 P~GlAVd~d-G~LYVaD~~n~rI~kid~~g~~~~~---~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d-G~LYVA 151 (486)
-..++++++ ++++++-..++.|..++........ .....+.. ...-.....|+++++ +.++++
T Consensus 116 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~------------~~~~~~v~~~~~~~~~~~~l~~ 183 (416)
T 2pm9_A 116 VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS------------MSSVDEVISLAWNQSLAHVFAS 183 (416)
T ss_dssp CCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS------------CCSSCCCCEEEECSSCTTEEEE
T ss_pred eEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc------------cCCCCCeeEEEeCCCCCcEEEE
Confidence 467888887 6777776677788888775321000 00000000 011224578999998 677777
Q ss_pred eCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeCCCC---eEEEEECCC
Q 011435 152 DTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDRGNA---ALRQISLNQ 221 (486)
Q Consensus 152 D~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gn~---rIr~id~~G 221 (486)
-..++.|+.+|... +.++..... ..+ .-.....++ ..+++ .++++-..++ .|+.++...
T Consensus 184 ~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~---------~~~~v~~~~-~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 184 AGSSNFASIWDLKAKKEVIHLSYTSP-NSG---------IKQQLSVVE-WHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp ESSSSCEEEEETTTTEEEEEECCCCC-SSC---------CCCCEEEEE-ECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EcCCCCEEEEECCCCCcceEEecccc-ccc---------cCCceEEEE-ECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 77788899998765 334432100 000 011245666 45554 5666666655 888888875
No 230
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.55 E-value=23 Score=37.67 Aligned_cols=69 Identities=12% Similarity=0.023 Sum_probs=43.7
Q ss_pred ceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCC
Q 011435 77 PYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~ 154 (486)
...+++++||+ |+++.. +.|+.++.++........+.+. -.....+++++||+ |+++.
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~----------------~~~~~~~~~SPDG~~la~~~-- 170 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG----------------EGFATDAKLSPKGGFVSFIR-- 170 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS----------------SSCEEEEEECTTSSEEEEEE--
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC----------------CcccccccCCCCCCEEEEEe--
Confidence 46889999998 555553 7899998875300011111110 11467899999998 55554
Q ss_pred CCEEEEEcCCC
Q 011435 155 NLAIRKIGDAG 165 (486)
Q Consensus 155 n~rIrkid~~G 165 (486)
++.|+.+|.++
T Consensus 171 ~~~i~~~d~~~ 181 (741)
T 2ecf_A 171 GRNLWVIDLAS 181 (741)
T ss_dssp TTEEEEEETTT
T ss_pred CCcEEEEecCC
Confidence 35888888765
No 231
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=84.42 E-value=33 Score=33.79 Aligned_cols=109 Identities=9% Similarity=0.029 Sum_probs=61.6
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..++++++|+.+++-..++.|..++..... ....+.+. -.....++++ ++.+++=..++
T Consensus 313 v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h----------------~~~v~~~~~~--~~~l~s~s~dg 372 (464)
T 3v7d_B 313 IYSTIYDHERKRCISASMDTTIRIWDLENGE--LMYTLQGH----------------TALVGLLRLS--DKFLVSAAADG 372 (464)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEEC--SSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EEEEEeCC----------------CCcEEEEEEc--CCEEEEEeCCC
Confidence 5688899999877777777889999875321 11122221 1123567776 45555545568
Q ss_pred EEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 157 AIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 157 rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.|+.+|... ...+.... ..+..++...+++.++++-. ++.|+.++....
T Consensus 373 ~v~vwd~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 373 SIRGWDANDYSRKFSYHH----------------TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp EEEEEETTTCCEEEEEEC----------------TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred cEEEEECCCCceeeeecC----------------CCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 888888765 22211110 01112223455565555554 578888887654
No 232
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=84.33 E-value=18 Score=35.60 Aligned_cols=107 Identities=10% Similarity=0.062 Sum_probs=60.4
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
=..|++.+||+++++-..++.|..++..... ....+.+. . -.-.+++.++.+.++-...+
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~--~~~~~~~h----~--------------~~v~~~s~~~~~l~sgs~d~ 209 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSH----S--------------ARVGSLSWNSYILSSGSRSG 209 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----S--------------SCEEEEEEETTEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCc--EEEEEeCC----C--------------CceEEEeeCCCEEEEEeCCC
Confidence 3789999999988777778889888876432 12222221 0 11223344566666666677
Q ss_pred EEEEEcCCC----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 157 AIRKIGDAG----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 157 rIrkid~~G----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
.|+..+... +.++.+.. .....+. ..++|..+++-..++.|+.++..
T Consensus 210 ~i~~~d~~~~~~~~~~~~~h~----------------~~~~~~~-~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 210 HIHHHDVRVAEHHVATLSGHS----------------QEVCGLR-WAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEEEEETTSSSCEEEEEECCS----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEESS
T ss_pred ceeEeeecccceeeEEecccc----------------cceeeee-ecCCCCeeeeeeccccceEEeec
Confidence 787777544 34443321 1122333 45556655555556666666654
No 233
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=84.22 E-value=3.2 Score=39.90 Aligned_cols=112 Identities=7% Similarity=-0.068 Sum_probs=63.7
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCc-ccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQ-YSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~-~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
-..+++.++|+++++-..++.|..++..... ......+.+. -.....++++++|+++++=..+
T Consensus 58 v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 58 VTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL----------------NRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp EEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC----------------SSCEEEEECCTTSSCCEEEESS
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc----------------CCceEEEEECCCCCEEEEEecC
Confidence 4789999999977766667788888875321 0011111111 1135688999988854444456
Q ss_pred CEEEEEcCCC------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 156 LAIRKIGDAG------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 156 ~rIrkid~~G------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
+.|+.+|.+. +..+.+.. -.....++ ..+++.++++-..++.|+.++..
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~h---------------~~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 122 RVISVCYFEQENDWWVSKHLKRPL---------------RSTILSLD-WHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SCEEECCC-----CCCCEEECSSC---------------CSCEEEEE-ECTTSSEEEEEESSSCEEEEEEC
T ss_pred CeEEEEEECCcccceeeeEeeccc---------------CCCeEEEE-EcCCCCEEEEEeCCCEEEEEEEE
Confidence 7788877554 23332210 11234566 56677777777777888888875
No 234
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.18 E-value=9.4 Score=40.68 Aligned_cols=82 Identities=13% Similarity=0.012 Sum_probs=46.0
Q ss_pred cceeEEEccCCe-EEEEECCCC-----EEEEEcCCCCcccccEEEecccCCccccCCCCc-------c--cccc---CCc
Q 011435 76 VPYKIRVSEDGE-LFAVDEVNS-----NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKP-------N--EARF---NHP 137 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~~n~-----rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~-------~--~a~L---n~P 137 (486)
.+..+++++||+ |+++....+ .|+.++.++.. ...+.... + ...+|.. . ..++ ...
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~---~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ---TRLLVDSK-V--VLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC---EEEEECGG-G--TC--------------------CCEES
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc---eeEccchh-h--cccccccccchhhhhhhhhhhccccCc
Confidence 478899999998 666554234 79999887542 22222210 0 0000000 0 0000 124
Q ss_pred ceEEEcCCCC-EEEEeCCCCEEEEEcCCC
Q 011435 138 KGVTMDDKGN-LYVADTLNLAIRKIGDAG 165 (486)
Q Consensus 138 ~GIavD~dG~-LYVAD~~n~rIrkid~~G 165 (486)
..+++++||+ |+++.. +.|+.+|.++
T Consensus 112 ~~~~~SpDg~~l~~~~~--~~i~~~d~~~ 138 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG--GELYLYDLKQ 138 (741)
T ss_dssp CCCEECTTSSEEEEEET--TEEEEEESSS
T ss_pred ceeEECCCCCEEEEEeC--CcEEEEECCC
Confidence 6889999998 666654 7888888654
No 235
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=84.14 E-value=20 Score=40.78 Aligned_cols=109 Identities=10% Similarity=0.041 Sum_probs=65.3
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC--CCCEEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD--KGNLYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYVAD~~ 154 (486)
-.+++++++|+++++-..++.|..++..... ....+.+. -..-..+++.+ ++.++++-..
T Consensus 660 v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~~~l~sg~~ 721 (1249)
T 3sfz_A 660 VLCCAFSSDDSYIATCSADKKVKIWDSATGK--LVHTYDEH----------------SEQVNCCHFTNKSNHLLLATGSN 721 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECSSSSCCEEEEEET
T ss_pred EEEEEEecCCCEEEEEeCCCeEEEEECCCCc--eEEEEcCC----------------CCcEEEEEEecCCCceEEEEEeC
Confidence 5789999999977777778899999876432 12222221 11345778877 4446666666
Q ss_pred CCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 155 NLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 155 n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
++.|+.+|... +.++.+.. .....++ ..+++.++++-..++.|+.++..
T Consensus 722 d~~v~vwd~~~~~~~~~~~~h~----------------~~v~~~~-~sp~~~~l~s~s~dg~v~vwd~~ 773 (1249)
T 3sfz_A 722 DFFLKLWDLNQKECRNTMFGHT----------------NSVNHCR-FSPDDELLASCSADGTLRLWDVR 773 (1249)
T ss_dssp TSCEEEEETTSSSEEEEECCCS----------------SCEEEEE-ECSSTTEEEEEESSSEEEEEEGG
T ss_pred CCeEEEEECCCcchhheecCCC----------------CCEEEEE-EecCCCEEEEEECCCeEEEEeCC
Confidence 77888888654 34443321 1123444 45556555555566666666654
No 236
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=84.02 E-value=4 Score=38.39 Aligned_cols=104 Identities=15% Similarity=0.070 Sum_probs=63.6
Q ss_pred EccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC---CCCEEEEeCCCCEE
Q 011435 82 VSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD---KGNLYVADTLNLAI 158 (486)
Q Consensus 82 Vd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~---dG~LYVAD~~n~rI 158 (486)
++++|+++++-..++.|..++..... .....+. -.....+++++ +|+++++-..++.|
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~----------------~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMA---LRWETNI----------------KNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTE---EEEEEEC----------------SSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCc---eeeecCC----------------CCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 56788877777777899999986432 1111111 11457899998 78866655667889
Q ss_pred EEEcCCC---ceEEc-----CCCCCCCCcCCCCccccccCCCceeEEEcCCCe-EEEEeCCCCeEEEEECCC
Q 011435 159 RKIGDAG---VTTIA-----GGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCS-LLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 159 rkid~~G---v~tia-----Gg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gn~rIr~id~~G 221 (486)
+.+|... +..+. +. -.....++ ..+++. ++++-..++.|+.++...
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~~----------------~~~v~~~~-~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKAH----------------KSTVWQVR-HLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEECC----------------SSCEEEEE-EETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEEeCcCCCcccceeeeccCCC----------------cCCEEEEE-ECCCCCcEEEEEeCCCcEEEeecCC
Confidence 8888543 22221 11 01234565 455665 677777777888887653
No 237
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=83.95 E-value=15 Score=35.07 Aligned_cols=112 Identities=7% Similarity=0.148 Sum_probs=69.3
Q ss_pred eeEEE-----cc-CCeEEEEECCCCEEEEEcCCCCc----cccc-EEEecccCCccccCCCCccccccCCcceEEEcCCC
Q 011435 78 YKIRV-----SE-DGELFAVDEVNSNIVKITPPLSQ----YSRG-RLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG 146 (486)
Q Consensus 78 ~GlAV-----d~-dG~LYVaD~~n~rI~kid~~g~~----~~~~-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG 146 (486)
..|++ .+ ||.++++-...+.|...+..... .+.. ..+.|. -..-..|+++++|
T Consensus 25 ~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h----------------~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 25 TSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGH----------------NHFVSDLALSQEN 88 (343)
T ss_dssp EEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCC----------------SSCEEEEEECSST
T ss_pred hheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccC----------------CCceEEEEECCCC
Confidence 56777 55 88888887777788877754211 0000 111111 1124688999999
Q ss_pred CEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 147 NLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 147 ~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.+.++-..++.|+..|... +.++.+.. ..-..++ ..++++.+++-...+.|+.++..+.
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~----------------~~v~~v~-~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGTTYKRFVGHQ----------------SEVYSVA-FSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSCEEEEEECCC----------------SCEEEEE-ECSSTTEEEEEETTSCEEEEESSSC
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEcCCC----------------CcEEEEE-ECCCCCEEEEEcCCCEEEEEeccCC
Confidence 9777777788999998654 44554321 1124565 4667766666667788888887653
No 238
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=83.89 E-value=5.5 Score=40.76 Aligned_cols=110 Identities=12% Similarity=0.150 Sum_probs=68.2
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC----------C
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD----------K 145 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~----------d 145 (486)
....++++++|.++++-..++.|..++.... ..+.- ..+ ..-...+.|++++ +
T Consensus 490 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~-----~~~~~-~~~-----------~h~~~v~~~~~sp~~~~~~~~~~~ 552 (615)
T 1pgu_A 490 KPSYISISPSETYIAAGDVMGKILLYDLQSR-----EVKTS-RWA-----------FRTSKINAISWKPAEKGANEEEIE 552 (615)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTT-----EEEEC-CSC-----------CCSSCEEEEEECCCC------CCS
T ss_pred ceEEEEECCCCCEEEEcCCCCeEEEeeCCCC-----cceeE-eec-----------CCCCceeEEEEcCccccccccccC
Confidence 4578999999997777777788998887532 22221 111 0112467899999 8
Q ss_pred CCEEEEeCCCCEEEEEcCCC----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 146 GNLYVADTLNLAIRKIGDAG----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 146 G~LYVAD~~n~rIrkid~~G----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
|.++++=..++.|+.++... +.++.+. -.....+++ .+++. +++-..++.|+.++++
T Consensus 553 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h----------------~~~v~~l~~-s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 553 EDLVATGSLDTNIFIYSVKRPMKIIKALNAH----------------KDGVNNLLW-ETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CCEEEEEETTSCEEEEESSCTTCCEEETTSS----------------TTCEEEEEE-EETTE-EEEEETTSCEEEEEEC
T ss_pred CCEEEEEcCCCcEEEEECCCCceechhhhcC----------------ccceEEEEE-cCCCC-eEEecCCceEEEEeee
Confidence 98666655677888888654 2222211 112356764 55666 5666666777777765
No 239
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=83.79 E-value=26 Score=32.06 Aligned_cols=147 Identities=12% Similarity=0.129 Sum_probs=80.1
Q ss_pred ccceecccCCCCCCCCCCcE--EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEE
Q 011435 36 SLLKWTTRSSSKAPQADGNV--LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRL 113 (486)
Q Consensus 36 ~~~~w~~~s~t~t~~~~gsv--v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~ 113 (486)
..+.|.... .-+...++.| .+...|..+.++.. ......=..|++.++|+++++-..++.|...+..... ....
T Consensus 29 ~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~-~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~--~~~~ 104 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQM-EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRN 104 (318)
T ss_dssp BCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEEC-CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEE
T ss_pred eEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEe-cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce--eEEE
Confidence 346675421 1122234555 45566766665532 1111123689999999988887888899999876432 1222
Q ss_pred EecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC----ceEEcCCCCCCCCcCCCCcccccc
Q 011435 114 VAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG----VTTIAGGKSNVAGFRDGPSEDAKF 189 (486)
Q Consensus 114 vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G----v~tiaGg~~g~~G~~DG~~~~a~f 189 (486)
+.+. ...-.++..++.+.++-...+.++..+... +.++.+..
T Consensus 105 ~~~h------------------~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 150 (318)
T 4ggc_A 105 MTSH------------------SARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS---------------- 150 (318)
T ss_dssp EECC------------------SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS----------------
T ss_pred ecCc------------------cceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCcc----------------
Confidence 2221 112234444566666555566666665443 23333321
Q ss_pred CCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 190 SNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 190 ~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.....++ ...++.++++-..++.|+.++...
T Consensus 151 ~~~~~~~-~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 151 QEVCGLR-WAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp SCEEEEE-ECTTSSEEEEEETTSCEEEEESSC
T ss_pred CceEEEE-EcCCCCEEEEEecCcceeEEECCC
Confidence 1122343 566777777777777888888764
No 240
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=83.39 E-value=16 Score=36.09 Aligned_cols=72 Identities=11% Similarity=0.165 Sum_probs=44.3
Q ss_pred EEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCEEEE
Q 011435 81 RVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAIRK 160 (486)
Q Consensus 81 AVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrk 160 (486)
+++++|+++++-..++.|..++..... ....+.+. -.....++++++|+.+++-..++.|+.
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMK--CLYILSGH----------------TDRIYSTIYDHERKRCISASMDTTIRI 336 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCC----------------CCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 345566766666667788888875321 11122111 123568999999997666667788999
Q ss_pred EcCCC---ceEEc
Q 011435 161 IGDAG---VTTIA 170 (486)
Q Consensus 161 id~~G---v~tia 170 (486)
+|... +.++.
T Consensus 337 wd~~~~~~~~~~~ 349 (464)
T 3v7d_B 337 WDLENGELMYTLQ 349 (464)
T ss_dssp EETTTTEEEEEEC
T ss_pred EECCCCcEEEEEe
Confidence 99653 44543
No 241
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=83.32 E-value=3.6 Score=40.47 Aligned_cols=69 Identities=14% Similarity=0.103 Sum_probs=48.9
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCE
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLA 157 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~r 157 (486)
..|++++||.++++-...+.|..+|..... ....+. .|+ -..-+.|++++||.++++=...+.
T Consensus 273 ~~~~~Spdg~~lasgs~D~~V~iwd~~~~~--~~~~~~------~gH---------~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 273 TSMDVDMKGELAVLASNDNSIALVKLKDLS--MSKIFK------QAH---------SFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTTTE--EEEEET------TSS---------SSCEEEEEECTTSCEEEEEETTSE
T ss_pred EeEEECCCCCceEEEcCCCEEEEEECCCCc--EEEEec------Ccc---------cCCEEEEEECCCCCEEEEEeCCCe
Confidence 578899999988877777889999876321 111111 111 124579999999998888778889
Q ss_pred EEEEcC
Q 011435 158 IRKIGD 163 (486)
Q Consensus 158 Irkid~ 163 (486)
|++++.
T Consensus 336 vrvw~i 341 (365)
T 4h5i_A 336 IHIIKL 341 (365)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 998884
No 242
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=83.25 E-value=23 Score=32.28 Aligned_cols=68 Identities=12% Similarity=0.018 Sum_probs=43.6
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..|++ ++|+++++-..++.|..++..... ....+.+. -.....|+++++|+++++-..++
T Consensus 21 v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 21 VRDVVA-VDDSKVASVSRDGTVRLWSKDDQW--LGTVVYTG----------------QGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp EEEEEE-EETTEEEEEETTSEEEEEEESSSE--EEEEEEEC----------------SSCEEEEEEETTTTEEEEEETTS
T ss_pred cEEEEe-cCCCEEEEEEcCCcEEEEECCCCE--EEEEeecC----------------CccEEEEEECCCCCEEEEecCCC
Confidence 467888 777766666677888888875321 11122211 11356899999999666655677
Q ss_pred EEEEEcC
Q 011435 157 AIRKIGD 163 (486)
Q Consensus 157 rIrkid~ 163 (486)
.|+.++.
T Consensus 82 ~i~~~~~ 88 (313)
T 3odt_A 82 MINGVPL 88 (313)
T ss_dssp CEEEEET
T ss_pred eEEEEEe
Confidence 7877764
No 243
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.24 E-value=16 Score=34.89 Aligned_cols=119 Identities=15% Similarity=0.139 Sum_probs=60.9
Q ss_pred ceeEEEccCCe-EEEEEC--CCCE--EEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEE
Q 011435 77 PYKIRVSEDGE-LFAVDE--VNSN--IVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYV 150 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~--~n~r--I~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 150 (486)
+..+++++||+ |+++.. .... |++++..+.. ...+... .+ . .+++++ +|.+++
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~---~~~l~~~----~~----------~----~~~~s~~dg~~l~ 298 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE---NEEVMVM----PP----------C----SHLMSNFDGSLMV 298 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC---EEEEEEC----CS----------E----EEEEECSSSSEEE
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCC---eEEeeeC----CC----------C----CCCccCCCCceEE
Confidence 45678999998 555432 2334 9999876432 2222211 00 1 167888 898766
Q ss_pred EeC----------------CCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC-eEEEEeC--
Q 011435 151 ADT----------------LNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC-SLLVIDR-- 209 (486)
Q Consensus 151 AD~----------------~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G-~LYVaD~-- 209 (486)
+.. ++..|+++|.++ +..+...... .+..++ ........+++ .++| .|+++..
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~-~~~~~~----~~~~~~~~~~~-s~dg~~l~~~s~~~ 372 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTS-WDVLDG----DRQITHPHPSF-TPNDDGVLFTSDFE 372 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCC-CCCBTT----BSSTTCCCCEE-CTTSSEEEEEECTT
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCc-cccccc----cccCCCCCceE-ccCCCeEEEEecCC
Confidence 532 347899998765 4444332100 000000 00011233443 4455 5666553
Q ss_pred CCCeEEEEECCCC
Q 011435 210 GNAALRQISLNQD 222 (486)
Q Consensus 210 gn~rIr~id~~G~ 222 (486)
+...|..+++++.
T Consensus 373 ~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 373 GVPAIYIADVPES 385 (396)
T ss_dssp SSCEEEEEECCTT
T ss_pred CCceEEEEEEccc
Confidence 3346888887764
No 244
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=83.08 E-value=28 Score=36.72 Aligned_cols=69 Identities=14% Similarity=0.049 Sum_probs=41.6
Q ss_pred eeEEEcc--CCeEEE-EEC-CCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcce-EEEcCCCC-EEEE
Q 011435 78 YKIRVSE--DGELFA-VDE-VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKG-VTMDDKGN-LYVA 151 (486)
Q Consensus 78 ~GlAVd~--dG~LYV-aD~-~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~G-IavD~dG~-LYVA 151 (486)
.++++.+ ||.+++ ++. +..+|+.++.++.. ...+.+. . ..-.. ++++++|+ ||++
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~---~~~l~~~---~-------------~~v~~~~~~spdg~~l~~~ 373 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL---IRQVTKG---E-------------WEVTNFAGFDPKGTRLYFE 373 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCE---EEECCCS---S-------------SCEEEEEEECTTSSEEEEE
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCE---EEecCCC---C-------------eEEEeeeEEcCCCCEEEEE
Confidence 5678999 998544 433 23478888765421 2222221 0 01123 78999997 7777
Q ss_pred eCCCC----EEEEEcCCC
Q 011435 152 DTLNL----AIRKIGDAG 165 (486)
Q Consensus 152 D~~n~----rIrkid~~G 165 (486)
-..++ +|++++.++
T Consensus 374 ~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 374 STEASPLERHFYCIDIKG 391 (706)
T ss_dssp ESSSCTTCBEEEEEETTC
T ss_pred ecCCCCceEEEEEEEcCC
Confidence 66554 899998755
No 245
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=83.01 E-value=2.4 Score=40.80 Aligned_cols=130 Identities=10% Similarity=-0.049 Sum_probs=64.5
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcc-cccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQY-SRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~-~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
...+++.++|+++++-..++.|..++.+.... .....+.+. .-.....|+++++|+++++=..+
T Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------------h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP---------------LRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS---------------CCSCEEEEEECTTSSEEEEEESS
T ss_pred eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc---------------cCCCeEEEEEcCCCCEEEEEeCC
Confidence 46777878887555555566777777653210 001222210 11245789999999866665566
Q ss_pred CEEEEEcCCC--ceEE-cCCCCCCCCcCCCC--ccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCCc
Q 011435 156 LAIRKIGDAG--VTTI-AGGKSNVAGFRDGP--SEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQDD 223 (486)
Q Consensus 156 ~rIrkid~~G--v~ti-aGg~~g~~G~~DG~--~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~~ 223 (486)
+.|+.+|... +..- .....+.. ...+. ..-..-.....++ ..++|.++++-..++.|+.++.....
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~-~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSR-LPFNTVCAEYPSGGWVHAVG-FSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSC-CCEEEEEECCCCSSSEEEEE-ECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred CEEEEEEEEecccCCCccccccccc-cchhhhhhcccCCceEEEEE-ECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 7788887531 1000 00000000 00000 0000011234565 56777777776777888888887543
No 246
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=82.70 E-value=13 Score=34.67 Aligned_cols=76 Identities=4% Similarity=-0.072 Sum_probs=44.9
Q ss_pred cceeEEEcc---CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 76 VPYKIRVSE---DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 76 ~P~GlAVd~---dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
....+++++ +|+++++-..++.|..++........ ....-.. .+ .-.....++++++|. ++++
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~---~~---------~~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK-GFASVSE---KA---------HKSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT-EEEEEEE---EC---------CSSCEEEEEEETTEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc-ceeeecc---CC---------CcCCEEEEEECCCCCcEEEE
Confidence 357888988 78866666677888888764221000 0000000 01 112456899999988 6666
Q ss_pred eCCCCEEEEEcCC
Q 011435 152 DTLNLAIRKIGDA 164 (486)
Q Consensus 152 D~~n~rIrkid~~ 164 (486)
-..++.|+.+|..
T Consensus 278 ~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 278 AGGAGGLHLWKYE 290 (357)
T ss_dssp EETTSEEEEEEEE
T ss_pred EeCCCcEEEeecC
Confidence 5567788877743
No 247
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=82.69 E-value=32 Score=32.23 Aligned_cols=113 Identities=11% Similarity=0.059 Sum_probs=67.1
Q ss_pred cceeEEEccC--CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC---------
Q 011435 76 VPYKIRVSED--GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD--------- 144 (486)
Q Consensus 76 ~P~GlAVd~d--G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--------- 144 (486)
....+++.++ |.++++-..++.|..++...........+.+. -..-..+++++
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC----------------TTCEEEEEECCCC-------
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC----------------CCceEEEEEcCccccccccc
Confidence 3578888887 77777666777888888764321111112111 11245777777
Q ss_pred ----CCCEEEEeCCCCEEEEEcCCC---c----eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCC---CeEEEEeCC
Q 011435 145 ----KGNLYVADTLNLAIRKIGDAG---V----TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT---CSLLVIDRG 210 (486)
Q Consensus 145 ----dG~LYVAD~~n~rIrkid~~G---v----~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~---G~LYVaD~g 210 (486)
+++++++-..++.|+.+|... . .++.+. -.....++ ..++ +.++++-..
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h----------------~~~v~~~~-~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH----------------SDWVRDVA-WSPTVLLRSYLASVSQ 229 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC----------------SSCEEEEE-ECCCCSSSEEEEEEET
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc----------------cCcEeEEE-ECCCCCCCCeEEEEeC
Confidence 577666666677888887432 1 122211 01234566 4566 777777777
Q ss_pred CCeEEEEECCC
Q 011435 211 NAALRQISLNQ 221 (486)
Q Consensus 211 n~rIr~id~~G 221 (486)
++.|+.++...
T Consensus 230 dg~i~iwd~~~ 240 (379)
T 3jrp_A 230 DRTCIIWTQDN 240 (379)
T ss_dssp TSCEEEEEESS
T ss_pred CCEEEEEeCCC
Confidence 78888888775
No 248
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=82.05 E-value=36 Score=35.73 Aligned_cols=78 Identities=17% Similarity=0.138 Sum_probs=48.5
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..+++.+||.++++-..++.|..++..... ....+........+ .-....+|+++++|.++++=..++
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~--~~~~~~~~~~~~~~---------h~~~V~~v~~spdg~~l~s~s~D~ 261 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGT--KTGVFEDDSLKNVA---------HSGSVFGLTWSPDGTKIASASADK 261 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEECBCTTSSSCS---------SSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCc--Eeeeeccccccccc---------cCCCEEEEEECCCCCEEEEEeCCC
Confidence 4678888888888877777788888754221 01111000000001 122467899999999777766778
Q ss_pred EEEEEcCCC
Q 011435 157 AIRKIGDAG 165 (486)
Q Consensus 157 rIrkid~~G 165 (486)
.|+..|...
T Consensus 262 ~v~lWd~~~ 270 (611)
T 1nr0_A 262 TIKIWNVAT 270 (611)
T ss_dssp EEEEEETTT
T ss_pred eEEEEeCCC
Confidence 899888653
No 249
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=81.94 E-value=20 Score=34.83 Aligned_cols=127 Identities=11% Similarity=0.031 Sum_probs=70.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEec-ccCCccccCCCCccccccCCcceEEEcCCC-CEEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAG-SFQGYTGHVDGKPNEARFNHPKGVTMDDKG-NLYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG-~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG-~LYVAD~~ 154 (486)
-..+++.++|+++++- ..+.|..++..... ....+.. ......+ .-.....++++++| +++++=..
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~---------~~~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEE---------LTEVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGG---------CCCCEEEEEECSSCTTEEEEEET
T ss_pred eEEEEEcCCCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccc---------cCcceEEEEECCCCCcEEEEEeC
Confidence 5789999999987776 68899999876211 1111110 0000011 11245789999998 77776666
Q ss_pred CCEEEEEcCCC--c-----eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 155 NLAIRKIGDAG--V-----TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 155 n~rIrkid~~G--v-----~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
++.|+.+|... . .++.+.... ............-..++ ..++|.++++-.. +.|+.++...
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDP----SNRSFFSEIISSISDVK-FSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC---------CCHHHHHTTCEEEEE-ECTTSSEEEEEES-SEEEEEETTC
T ss_pred CCeEEEEECcCCccccceeeEeccCCCc----cccccccccCceEEEEE-ECCCCCEEEEeeC-CeEEEEeCCC
Confidence 78899998654 2 333221000 00000000001234566 5667776666656 8999999864
No 250
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=81.92 E-value=18 Score=38.25 Aligned_cols=72 Identities=15% Similarity=0.049 Sum_probs=41.0
Q ss_pred cceeEEEccCCe-EEEEECC--------CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCC
Q 011435 76 VPYKIRVSEDGE-LFAVDEV--------NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG 146 (486)
Q Consensus 76 ~P~GlAVd~dG~-LYVaD~~--------n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG 146 (486)
....+++++||+ |.++... .+.|+.++.++.. ...+... .+ .-.....+++++||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~l~~~----~~---------~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD---PQSLDPP----EV---------SNAKLQYAGWGPKG 125 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC---CEECCCT----TC---------CSCCCSBCCBCSST
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc---eEeccCC----cc---------ccccccccEECCCC
Confidence 368899999999 4444221 2578888876432 2222211 00 00124567888888
Q ss_pred C-EEEEeCCCCEEEEEcCCC
Q 011435 147 N-LYVADTLNLAIRKIGDAG 165 (486)
Q Consensus 147 ~-LYVAD~~n~rIrkid~~G 165 (486)
+ |.++.. +.|++++.++
T Consensus 126 ~~la~~~~--~~i~~~~~~~ 143 (723)
T 1xfd_A 126 QQLIFIFE--NNIYYCAHVG 143 (723)
T ss_dssp TCEEEEET--TEEEEESSSS
T ss_pred CEEEEEEC--CeEEEEECCC
Confidence 6 444432 5788887665
No 251
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.82 E-value=26 Score=33.39 Aligned_cols=72 Identities=8% Similarity=-0.148 Sum_probs=40.4
Q ss_pred ceeEEEcc-CCe-EEE-EECCC----CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-E
Q 011435 77 PYKIRVSE-DGE-LFA-VDEVN----SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-L 148 (486)
Q Consensus 77 P~GlAVd~-dG~-LYV-aD~~n----~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-L 148 (486)
...+++++ ||. |++ ++... .+|+.++.++.. ...+... . .-..+..++++++|+ |
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~---~-----------~~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---VRKIKEH---A-----------EGESCTHEFWIPDGSAM 252 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---CEESSCC---C-----------TTEEEEEEEECTTSSCE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---eeEeecc---C-----------CCccccceEECCCCCEE
Confidence 46778888 676 544 43222 478888876432 2222110 0 001245689999998 5
Q ss_pred EEE-eC-CCCE--EEEEcCCC
Q 011435 149 YVA-DT-LNLA--IRKIGDAG 165 (486)
Q Consensus 149 YVA-D~-~n~r--Irkid~~G 165 (486)
+++ +. +... |+++|..+
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTT
T ss_pred EEEecCCCCccceEEEEECCC
Confidence 554 32 3334 99998754
No 252
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=80.57 E-value=17 Score=34.66 Aligned_cols=71 Identities=14% Similarity=0.059 Sum_probs=46.1
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCC-cccc-cEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLS-QYSR-GRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~-~~~~-~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
-.+++++++|+++++-...+.|..++.+.. .... ...+.+. -..-..|+++++|+++++=..
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH----------------SQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC----------------SSCEEEEEECSSSSEEEEEET
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC----------------CCceEEEEECCCCCEEEEEcC
Confidence 467899999998887777788888887321 1001 1112221 113468999999997777666
Q ss_pred CCEEEEEcC
Q 011435 155 NLAIRKIGD 163 (486)
Q Consensus 155 n~rIrkid~ 163 (486)
++.|+..+.
T Consensus 174 D~~i~iW~~ 182 (330)
T 2hes_X 174 DDTVRIWKD 182 (330)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEEEC
Confidence 778887764
No 253
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=80.52 E-value=19 Score=34.30 Aligned_cols=111 Identities=15% Similarity=0.155 Sum_probs=66.5
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcc----cc-cEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEE
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQY----SR-GRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVA 151 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~----~~-~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA 151 (486)
-..|++.++|+++++-...+.|...+...... .. ..++.| + -..-..|+++++|+++++
T Consensus 61 v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-------h---------~~~V~~v~~sp~g~~las 124 (330)
T 2hes_X 61 IRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-------H---------ENEVKGVAWSNDGYYLAT 124 (330)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--------------------CEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-------C---------CCcEEEEEECCCCCEEEE
Confidence 46899999999888777778888887642110 00 111111 1 113468999999997766
Q ss_pred eCCCCEEEEEcCC--C-----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 152 DTLNLAIRKIGDA--G-----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 152 D~~n~rIrkid~~--G-----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
=..++.|+..|.. + +.++.+.. .....++ ..+++.++++-..++.|+.++..
T Consensus 125 ~s~D~~v~iwd~~~~~~~~~~~~~~~~h~----------------~~v~~v~-~~p~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 125 CSRDKSVWIWETDESGEEYECISVLQEHS----------------QDVKHVI-WHPSEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp EETTSCEEEEECCTTCCCCEEEEEECCCS----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEEEE
T ss_pred EeCCCEEEEEeccCCCCCeEEEEEeccCC----------------CceEEEE-ECCCCCEEEEEcCCCeEEEEECC
Confidence 6667888888862 1 12222210 1123555 46677777777777888887754
No 254
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=80.18 E-value=8.9 Score=39.83 Aligned_cols=34 Identities=12% Similarity=0.085 Sum_probs=22.0
Q ss_pred ceEEEcCCCCEEE-E-e-CCC-CEEEEEcCCC--ceEEcC
Q 011435 138 KGVTMDDKGNLYV-A-D-TLN-LAIRKIGDAG--VTTIAG 171 (486)
Q Consensus 138 ~GIavD~dG~LYV-A-D-~~n-~rIrkid~~G--v~tiaG 171 (486)
..+++++||...+ + + ..+ ..|+++|.++ +.++.+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec
Confidence 6889999999433 2 2 222 5688998654 566644
No 255
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=79.44 E-value=70 Score=34.17 Aligned_cols=74 Identities=14% Similarity=0.015 Sum_probs=41.0
Q ss_pred ceeEEEccCCe-EEEEECC---------------CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceE
Q 011435 77 PYKIRVSEDGE-LFAVDEV---------------NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGV 140 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~---------------n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GI 140 (486)
..++++.+||+ ||++-.. ..+|++++..+.. ....++.... .. -....++
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~-~~~~~v~~~~-~~------------~~~~~~~ 238 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ-SEDILCAEFP-DE------------PKWMGGA 238 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG-GGCEEEECCT-TC------------TTCEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc-ccceEEeccC-CC------------CeEEEEE
Confidence 46789999997 6665432 2358888775432 1112222210 00 0023588
Q ss_pred EEcCCCC-EEEE-eCC---CCEEEEEcCC
Q 011435 141 TMDDKGN-LYVA-DTL---NLAIRKIGDA 164 (486)
Q Consensus 141 avD~dG~-LYVA-D~~---n~rIrkid~~ 164 (486)
++++||. |+++ ... +..|+.+|.+
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 9999998 4443 322 5688888754
No 256
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=79.31 E-value=70 Score=34.65 Aligned_cols=75 Identities=9% Similarity=-0.058 Sum_probs=49.0
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCccc-----ccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEE
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYS-----RGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVA 151 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~-----~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA 151 (486)
-..+++++||.++++-...+.|..++..+.... ...++-+. ..|+ .+.-..|++.++| | ++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~---~~gh---------~~~V~sVawSPdg-L-aa 197 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS---DAGS---------KDWVTHIVWYEDV-L-VA 197 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS---CTTC---------CCCEEEEEEETTE-E-EE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc---cccc---------cccEEEEEEcCCc-E-EE
Confidence 467999999996666667889999998754210 11222221 1111 2345789999999 4 55
Q ss_pred eCCCCEEEEEcCCC
Q 011435 152 DTLNLAIRKIGDAG 165 (486)
Q Consensus 152 D~~n~rIrkid~~G 165 (486)
-..++.|+..+.++
T Consensus 198 ss~D~tVrlWd~~~ 211 (588)
T 2j04_A 198 ALSNNSVFSMTVSA 211 (588)
T ss_dssp EETTCCEEEECCCS
T ss_pred EeCCCeEEEEECCC
Confidence 55578899888776
No 257
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=79.15 E-value=16 Score=39.74 Aligned_cols=73 Identities=15% Similarity=0.180 Sum_probs=45.7
Q ss_pred cceEEEcCCCCEEEEeCCCCEEEEEcCCC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEE
Q 011435 137 PKGVTMDDKGNLYVADTLNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALR 215 (486)
Q Consensus 137 P~GIavD~dG~LYVAD~~n~rIrkid~~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr 215 (486)
-..++++++|.+..+=..++.|+.++.++ +.++. ....... ..-..++ ..++|.+..+-..++.|+
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~-----------~sv~sva-fSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSS-----------RTYHCFE-WNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTT-----------TCEEEEE-ECSSSSCEEEEETTSEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCcccc-----------ccEEEEE-EcCCCCEEEEEcCCCEEE
Confidence 46899999999555555677888888766 33333 1100000 0123566 466776666666778888
Q ss_pred EEECCCC
Q 011435 216 QISLNQD 222 (486)
Q Consensus 216 ~id~~G~ 222 (486)
.++..+.
T Consensus 155 IWd~~~~ 161 (588)
T 2j04_A 155 FFSIRKN 161 (588)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8888764
No 258
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=79.15 E-value=17 Score=34.44 Aligned_cols=111 Identities=12% Similarity=0.072 Sum_probs=64.4
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC--CCCEEEEeCCC
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD--KGNLYVADTLN 155 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYVAD~~n 155 (486)
..++++++|+++++-...+.|..++...........+.|. . ..-..|++.+ +|+++++=..+
T Consensus 17 ~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH----~------------~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 17 HDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH----E------------GPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp EEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECC----S------------SCEEEEEECCGGGSSCEEEEETT
T ss_pred EEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCC----C------------ccEEEEEeCCCCCCCEEEEEECC
Confidence 6788999999888877788888888643210001122221 1 1235677754 46755555556
Q ss_pred CEEEEEcCCC-----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCC--CeEEEEeCCCCeEEEEECCC
Q 011435 156 LAIRKIGDAG-----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT--CSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 156 ~rIrkid~~G-----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~--G~LYVaD~gn~rIr~id~~G 221 (486)
+.|+..|... +.++.+.. .....+++ .++ |.++++-..++.|+.++...
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~----------------~~V~~v~~-~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHD----------------SSVNSVCW-APHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCS----------------SCCCEEEE-CCTTTCSCEEEECSSSCEEEEEECS
T ss_pred CEEEEEECCCCcceEEEEccCCC----------------CceEEEEE-CCCCCCcEEEEEcCCCCEEEEecCC
Confidence 7888887643 12222210 12345654 343 66777777777888887764
No 259
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=78.63 E-value=5.1 Score=40.82 Aligned_cols=116 Identities=11% Similarity=-0.032 Sum_probs=66.0
Q ss_pred ceeEEEccCCeEEE----EECCCCEEEEEcCCCCc-----ccc-cEEEecccCCccccCCCCccccccCCcceEEEcCC-
Q 011435 77 PYKIRVSEDGELFA----VDEVNSNIVKITPPLSQ-----YSR-GRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK- 145 (486)
Q Consensus 77 P~GlAVd~dG~LYV----aD~~n~rI~kid~~g~~-----~~~-~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d- 145 (486)
...++++++|++++ +-...+.|..++..... ..+ ...+. . ..|+ -....+|+++++
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~---~~~h---------~~~V~~v~~~p~~ 161 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-L---LKDA---------GGMVIDMKWNPTV 161 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-C---CCSG---------GGSEEEEEECSSC
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-c---cCCC---------CCceEEEEECCCC
Confidence 67899999998555 44556678888753210 000 00000 0 0010 124678999997
Q ss_pred CCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 146 GNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 146 G~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
++++++=..++.|+.+|... +....+. -.....++ ..++|..+++-..++.|+.++.++.
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~~~~~~~~~----------------~~~v~~v~-wspdg~~lasgs~dg~v~iwd~~~~ 224 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETVKVCATLPS----------------TVAVTSVC-WSPKGKQLAVGKQNGTVVQYLPTLQ 224 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSEEEEEEECG----------------GGCEEEEE-ECTTSSCEEEEETTSCEEEECTTCC
T ss_pred CCEEEEEECCCeEEEEEcCCCcceeeccCC----------------CCceeEEE-EcCCCCEEEEEcCCCcEEEEccCCc
Confidence 77777666678888888654 1111110 01245566 4556665555556778888888743
No 260
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=78.31 E-value=45 Score=36.05 Aligned_cols=120 Identities=10% Similarity=0.062 Sum_probs=67.7
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-..|..|.+|+|||... +.|.+++...........+.-. .. ...+ .-+....|+.|.+|+|||+- . +
T Consensus 326 v~~i~~D~~g~lWiGt~--~Gl~~~~~~~~~~~~~~~~~~~-~~-----~~~l---~~~~v~~i~~d~~g~lWigt-~-~ 392 (758)
T 3ott_A 326 FYSLFRDSKGFYWFGGA--NGLIRFTDPAGERHDAIWYRMG-DK-----TYPL---SHNRIRHIYEDKEQQLWIAT-D-G 392 (758)
T ss_dssp EEEEEECTTCCEEEEET--TEEEEESCTTSSCCCCEEECTT-CS-----SSCC---SCSCEEEEEECTTSCEEEEE-T-T
T ss_pred EEEEEEcCCCCEEEeeC--CcceeecccccccceeEEeccC-Cc-----CCCC---CCCceEEEEECCCCCEEEEe-C-C
Confidence 35688899999999863 4688888653211112222110 00 0000 11345789999999999997 3 5
Q ss_pred EEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 157 AIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 157 rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
-|.++++.+ +..+.-... .+. ..-+.-..|+ .|.+|+|||+-.++ -|.+++..
T Consensus 393 GL~~~~~~~~~~~~~~~~~~------~~~---~~~~~v~~i~-~d~~g~lWigT~~~-Gl~~~~~~ 447 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDN------TGT---YNTNWTYYIF-EDTAGQLWISTCLG-GIFVVDKH 447 (758)
T ss_dssp EEEEEETTTTEEEEEEEECC------C-----CBSSSEEEEE-ECTTSEEEEEESSS-CEEEEEHH
T ss_pred cHhhcCcCCCcEEEeecCCC------cCC---CCCceEEEEE-EcCCCCEEEEECCC-ceEEEccc
Confidence 799999765 443321000 000 0001223454 78899999987543 46777654
No 261
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=76.45 E-value=46 Score=32.42 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=44.5
Q ss_pred EccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCEEEEE
Q 011435 82 VSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAIRKI 161 (486)
Q Consensus 82 Vd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrki 161 (486)
..++|.++++-..++.|..+|..... ....+.+. ..-.....|+++++|+++++=..++.|+.+
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~--------------~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw 241 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLE--RLQIIENS--------------PRHGAVSSICIDEECCVLILGTTRGIIDIW 241 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCC--EEEEEECC--------------GGGCCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCe--eeEEEccC--------------CCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 44678877777778899999876432 12222221 001246789999999966665667889999
Q ss_pred cCCC
Q 011435 162 GDAG 165 (486)
Q Consensus 162 d~~G 165 (486)
|...
T Consensus 242 d~~~ 245 (437)
T 3gre_A 242 DIRF 245 (437)
T ss_dssp ETTT
T ss_pred EcCC
Confidence 8654
No 262
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=75.62 E-value=51 Score=30.49 Aligned_cols=121 Identities=11% Similarity=0.076 Sum_probs=67.1
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCC-CcccccEEEecccCCccccCCCCccccccCCcceEEEcC-CCCEEEEeC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPL-SQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD-KGNLYVADT 153 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g-~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD~ 153 (486)
...++++++++ |+++. .++.|..++... ... ........ .-.....|++++ +|+++++-.
T Consensus 152 ~v~~~~~~~~~-l~~~~-~d~~i~i~d~~~~~~~-~~~~~~~~---------------~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 152 KIFTMDTNSSR-LIVGM-NNSQVQWFRLPLCEDD-NGTIEESG---------------LKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp CEEEEEECSSE-EEEEE-STTEEEEEESSCCTTC-CCEEEECS---------------CSSCEEEEEECSGGGCEEEEEE
T ss_pred ceEEEEecCCc-EEEEe-CCCeEEEEECCccccc-cceeeecC---------------CCCceeEEEECCCCCCEEEEEe
Confidence 45778888776 55554 456888888764 210 11111110 011467899999 898666666
Q ss_pred CCCEEEEEc--CC------C-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 154 LNLAIRKIG--DA------G-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 154 ~n~rIrkid--~~------G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.++.|+.++ .. . +.++.+..... .+ .........++ ..+++.++++-..++.|+.++....
T Consensus 214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL----KD---TNLAYPVNSIE-FSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTTCEEEECCCCCT----TC---CSSCCCEEEEE-ECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cCCcEEEEEEcCCCcccccccceeeecccccc----cc---cccceeEEEEE-EcCCCCEEEEecCCceEEEEcCccH
Confidence 678877744 43 2 33443321000 00 00111234565 4666766666667788888888743
No 263
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=75.55 E-value=51 Score=30.51 Aligned_cols=70 Identities=9% Similarity=0.007 Sum_probs=48.1
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEE--cCCCCEEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTM--DDKGNLYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIav--D~dG~LYVAD~~ 154 (486)
-..+++.++|+++++-..++.|..++..... .....+. -.....|++ +++|+++++-..
T Consensus 89 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~----------------~~~v~~~~~~~~~~~~~l~~~~~ 149 (368)
T 3mmy_A 89 VLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ---AIQIAQH----------------DAPVKTIHWIKAPNYSCVMTGSW 149 (368)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEEC----------------SSCEEEEEEEECSSCEEEEEEET
T ss_pred EEEEEECcCCCEEEEEcCCCcEEEEEcCCCC---ceeeccc----------------cCceEEEEEEeCCCCCEEEEccC
Confidence 5789999999877766677899999886432 2222221 113468888 888886666556
Q ss_pred CCEEEEEcCCC
Q 011435 155 NLAIRKIGDAG 165 (486)
Q Consensus 155 n~rIrkid~~G 165 (486)
++.|+.+|...
T Consensus 150 dg~i~vwd~~~ 160 (368)
T 3mmy_A 150 DKTLKFWDTRS 160 (368)
T ss_dssp TSEEEEECSSC
T ss_pred CCcEEEEECCC
Confidence 78899998644
No 264
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=75.42 E-value=56 Score=30.86 Aligned_cols=125 Identities=9% Similarity=0.039 Sum_probs=64.8
Q ss_pred eeEEEcc---CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeC
Q 011435 78 YKIRVSE---DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADT 153 (486)
Q Consensus 78 ~GlAVd~---dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 153 (486)
..+++.+ ++.++++-..++.|..++..... ....+.+. -.....|+++++|. ++++-.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~ll~~~~ 206 (408)
T 4a11_B 145 YSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS--CSHILQGH----------------RQEILAVSWSPRYDYILATAS 206 (408)
T ss_dssp EEEEECSSCSSCCEEEEEESSSSEEEEESSSSC--CCEEECCC----------------CSCEEEEEECSSCTTEEEEEE
T ss_pred eeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc--eeeeecCC----------------CCcEEEEEECCCCCcEEEEEc
Confidence 4555554 34455555556677777765321 11122111 11346899999887 565555
Q ss_pred CCCEEEEEcCCC----ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 154 LNLAIRKIGDAG----VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 154 ~n~rIrkid~~G----v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.++.|+.+|... +..+.... +......-......-.....++ ..+++..+++-..++.|+.++....
T Consensus 207 ~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 207 ADSRVKLWDVRRASGCLITLDQHN-GKKSQAVESANTAHNGKVNGLC-FTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp TTSCEEEEETTCSSCCSEECCTTT-TCSCCCTTTSSCSCSSCEEEEE-ECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCcEEEEECCCCCcccccccccc-cccceeeccccccccCceeEEE-EcCCCCEEEEecCCCeEEEEECCCC
Confidence 678888888643 23321110 0000000000001112234566 5667776666667788999988753
No 265
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=75.38 E-value=9.8 Score=40.32 Aligned_cols=122 Identities=3% Similarity=-0.108 Sum_probs=65.3
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTL 154 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~ 154 (486)
.+..+++.+||+++++ ...+.|+.++..+.. ...+.... .. .-.....+++++||+ |.++...
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~---~~~~~~~~---~~---------~~~~v~~~~~SpDg~~l~~~~~~ 81 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT---STVLIEGK---KI---------ESLRAIRYEISPDREYALFSYNV 81 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC---CEEEECTT---TT---------TTTTCSEEEECTTSSEEEEEESC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc---EEEEeccc---cc---------cccccceEEECCCCCEEEEEecC
Confidence 4788899999995555 355688888876432 23333210 00 001367899999999 4444221
Q ss_pred --------CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCce--eEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 155 --------NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFD--VVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 155 --------n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~g--Ia~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
...|+.+|.++ ...+.... +.. ....... -+|.| |++. .+++||+.|..++..+++...
T Consensus 82 ~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~~~----~~~~~~~-~SPdG~~la~~-~~~~i~~~~~~~g~~~~~~~~ 152 (723)
T 1xfd_A 82 EPIYQHSYTGYYVLSKIPHGDPQSLDPPE-VSN----AKLQYAG-WGPKGQQLIFI-FENNIYYCAHVGKQAIRVVST 152 (723)
T ss_dssp CCCSSSCCCSEEEEEESSSCCCEECCCTT-CCS----CCCSBCC-BCSSTTCEEEE-ETTEEEEESSSSSCCEEEECC
T ss_pred ccceeecceeeEEEEECCCCceEeccCCc-ccc----ccccccE-ECCCCCEEEEE-ECCeEEEEECCCCceEEEecC
Confidence 26788888665 33332211 000 0000011 12333 5543 346788888766665555544
No 266
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=75.22 E-value=11 Score=41.04 Aligned_cols=73 Identities=8% Similarity=-0.051 Sum_probs=42.0
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC--CCEEEEeCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK--GNLYVADTL 154 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d--G~LYVAD~~ 154 (486)
-..++++++|+++++-..++.|..++..+........+.+. -..-..|++.++ |+++++=..
T Consensus 12 V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h----------------~~~V~~l~~s~~~~~~~l~s~s~ 75 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH----------------EGPVWRVDWAHPKFGTILASCSY 75 (753)
T ss_dssp EEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCC----------------SSCEEEEEECCTTSCSEEEEEET
T ss_pred eEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCC----------------cCceEEEEecCCCCCCEEEEEeC
Confidence 36778888888666666678888887642210111112121 112357777766 775555555
Q ss_pred CCEEEEEcCCC
Q 011435 155 NLAIRKIGDAG 165 (486)
Q Consensus 155 n~rIrkid~~G 165 (486)
++.|+.+|..+
T Consensus 76 Dg~I~vwd~~~ 86 (753)
T 3jro_A 76 DGKVLIWKEEN 86 (753)
T ss_dssp TSCEEEEEEET
T ss_pred CCeEEEEECCC
Confidence 67777776443
No 267
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=74.92 E-value=37 Score=33.16 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=78.3
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEe-cccCCccccCCCCcccccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVA-GSFQGYTGHVDGKPNEARF 134 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~va-G~~~G~~G~~dG~~~~a~L 134 (486)
.+...+..+.++... ........++++++|.++++-..++.|..+|..... ....+. +. .
T Consensus 197 wd~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~----~------------ 257 (437)
T 3gre_A 197 FDIRTLERLQIIENS-PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV--LIRSWSFGD----H------------ 257 (437)
T ss_dssp EETTTCCEEEEEECC-GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE--EEEEEBCTT----C------------
T ss_pred EeCCCCeeeEEEccC-CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc--EEEEEecCC----C------------
Confidence 344455544444321 011235889999999977777777889999876321 111111 10 0
Q ss_pred CCcceEEEc----CCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCC--CcC-CC-Ccccccc------CCCceeEE
Q 011435 135 NHPKGVTMD----DKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVA--GFR-DG-PSEDAKF------SNDFDVVY 197 (486)
Q Consensus 135 n~P~GIavD----~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~--G~~-DG-~~~~a~f------~~P~gIa~ 197 (486)
..-..|++. ++|.++++-..++.|+.+|... +.++.+...... .|. ++ ...+..+ ..-..+++
T Consensus 258 ~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~ 337 (437)
T 3gre_A 258 APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISV 337 (437)
T ss_dssp EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEE
T ss_pred CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEE
Confidence 012355333 4566666666677888888653 445544311111 111 11 0001111 12345664
Q ss_pred EcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 198 VRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 198 vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+ ++.++++-..++.|+.++....
T Consensus 338 -~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 338 -S-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp -E-TTEEEEEEGGGTEEEEEETTCG
T ss_pred -C-CceEEEecCCCCeEEEEECCCc
Confidence 4 6678888888899999998754
No 268
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=74.35 E-value=12 Score=40.61 Aligned_cols=118 Identities=13% Similarity=0.119 Sum_probs=65.9
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEe-cccCCccccCCCCccccccC-CcceEEEcCCCC-EEEEeCC
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVA-GSFQGYTGHVDGKPNEARFN-HPKGVTMDDKGN-LYVADTL 154 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~va-G~~~G~~G~~dG~~~~a~Ln-~P~GIavD~dG~-LYVAD~~ 154 (486)
..+++.+||.+++++ .+.|..++..++. ...+. +.. . ..++ ...++++++||+ |+++-..
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~---~~~~~~~~~----~--------~~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGN---SSVFLENST----F--------DEFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCC---EEEEECTTT----T--------TTCCSCCCEEEECTTSSEEEEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCc---eEEEEechh----h--------hhhcccccceEECCCCCEEEEEECC
Confidence 578888999987777 6789999987543 23332 210 0 0011 234688999998 3333211
Q ss_pred --------CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCc--eeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 155 --------NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDF--DVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 155 --------n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~--gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
...++.+|..+ +..+.+.. +. .....| +|. -||++ .+++||+.|..++.+++++.+|.
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~~l~~~~----~~----~~~~~~-SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~ 152 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLITEERIP----NN----TQWVTW-SPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGK 152 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCCC----TT----EEEEEE-CSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCB
T ss_pred eeeEEEccceEEEEEECCCCcEEEcccCC----Cc----ceeeEE-CCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCC
Confidence 14566777655 33332210 00 000111 232 26655 56789999887777777776653
No 269
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=73.05 E-value=34 Score=38.34 Aligned_cols=107 Identities=13% Similarity=0.122 Sum_probs=63.4
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~n 155 (486)
...|+++++|.++++-..++.|+.++..+.. .....+. . ..-..|++.+ |. |+.+. .+
T Consensus 20 V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~---~~~~~~~--------~--------~~V~~l~fsp-g~~L~S~s-~D 78 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVTGEVHIYGQQQVE---VVIKLED--------R--------SAIKEMRFVK-GIYLVVIN-AK 78 (902)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEECSTTCE---EEEECSS--------C--------CCEEEEEEET-TTEEEEEE-TT
T ss_pred cEEEEECCCCCEEEEEeCCCEEEEEeCCCcE---EEEEcCC--------C--------CCEEEEEEcC-CCEEEEEE-Cc
Confidence 5889999999988888888899999875321 1111110 0 0236889998 77 55444 56
Q ss_pred CEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 156 LAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 156 ~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.|+..|... +.++... + ....++ .+++++.+++-..++.|+.++....
T Consensus 79 ~~v~lWd~~~~~~~~~~~~~---------~--------~V~~v~-~sp~g~~l~sgs~dg~V~lwd~~~~ 130 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFVP---------G--------KITSID-TDASLDWMLIGLQNGSMIVYDIDRD 130 (902)
T ss_dssp CEEEEEETTTCSEEEEEECS---------S--------CEEEEE-CCTTCSEEEEEETTSCEEEEETTTT
T ss_pred CeEEEEECCCCcEEEEEcCC---------C--------CEEEEE-ECCCCCEEEEEcCCCcEEEEECCCC
Confidence 8888888654 3444211 0 123344 3455544444445566666666544
No 270
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=72.79 E-value=24 Score=38.31 Aligned_cols=112 Identities=11% Similarity=0.057 Sum_probs=65.7
Q ss_pred ceeEEEccC--CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC----------
Q 011435 77 PYKIRVSED--GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD---------- 144 (486)
Q Consensus 77 P~GlAVd~d--G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~---------- 144 (486)
-..+++.++ |+++++-..++.|..++...........+.+. -..-..|++++
T Consensus 102 V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~----------------~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 102 VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp EEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC----------------SSCEEEEEECCCC--------
T ss_pred eEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC----------------CCceEEEEecCcccccccccc
Confidence 467888887 77777666777888888754311111222221 11235667766
Q ss_pred ---CCCEEEEeCCCCEEEEEcCCC-------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCC---CeEEEEeCCC
Q 011435 145 ---KGNLYVADTLNLAIRKIGDAG-------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT---CSLLVIDRGN 211 (486)
Q Consensus 145 ---dG~LYVAD~~n~rIrkid~~G-------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~---G~LYVaD~gn 211 (486)
+|+++++-..++.|+.+|... +.++.+. -.....++ ..++ +.++++-..+
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h----------------~~~V~~l~-~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH----------------SDWVRDVA-WSPTVLLRSYLASVSQD 228 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC----------------SSCEEEEE-ECCCCSSSEEEEEEESS
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC----------------CCcEEEEE-eccCCCCCCEEEEEecC
Confidence 467555555577788887432 1222211 01234566 4556 7777877778
Q ss_pred CeEEEEECCC
Q 011435 212 AALRQISLNQ 221 (486)
Q Consensus 212 ~rIr~id~~G 221 (486)
+.|+.++...
T Consensus 229 g~I~iwd~~~ 238 (753)
T 3jro_A 229 RTCIIWTQDN 238 (753)
T ss_dssp SCEEEEEESS
T ss_pred CEEEEecCCC
Confidence 8899988775
No 271
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=71.40 E-value=31 Score=32.40 Aligned_cols=31 Identities=10% Similarity=-0.070 Sum_probs=19.1
Q ss_pred cceEEEcCCCCEEEE-eCC--------CCEEEEEcCCC-ceEE
Q 011435 137 PKGVTMDDKGNLYVA-DTL--------NLAIRKIGDAG-VTTI 169 (486)
Q Consensus 137 P~GIavD~dG~LYVA-D~~--------n~rIrkid~~G-v~ti 169 (486)
...++++++| |+++ ... ...|+.++ .| +..+
T Consensus 173 ~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l 213 (347)
T 2gop_A 173 FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKM 213 (347)
T ss_dssp TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEE
T ss_pred cccccCCCCe-EEEEEecccccccccccccEEEeC-CCceEEe
Confidence 4577888888 5544 322 34788888 55 4444
No 272
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=70.99 E-value=7.1 Score=42.53 Aligned_cols=78 Identities=19% Similarity=0.226 Sum_probs=54.6
Q ss_pred ccceeEEEccCCe-EEEEECCCCEEEEEcCCCC-------cccccEEEecccCCccccCCCCccccccCCcceEEEcCCC
Q 011435 75 VVPYKIRVSEDGE-LFAVDEVNSNIVKITPPLS-------QYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKG 146 (486)
Q Consensus 75 ~~P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~-------~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG 146 (486)
.+|+|+-++|||. +++++-...+|.+|+...- ...-..++++... -| ..|.-.++|++|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~G-----------lGPlHt~Fd~~G 389 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LG-----------LGPLHTTFDGRG 389 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CC-----------SCEEEEEECSSS
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CC-----------CcccEEEECCCC
Confidence 5799999999998 8888888888888886410 0000011122211 11 159999999999
Q ss_pred CEEEEeCCCCEEEEEcCCC
Q 011435 147 NLYVADTLNLAIRKIGDAG 165 (486)
Q Consensus 147 ~LYVAD~~n~rIrkid~~G 165 (486)
+.|.+=.-...|.+.+.+.
T Consensus 390 ~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 390 NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEEEETTTTEEEEEEHHH
T ss_pred ceEeeeeecceEEEEeccH
Confidence 9999998889999987543
No 273
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=70.01 E-value=64 Score=31.03 Aligned_cols=70 Identities=16% Similarity=0.133 Sum_probs=48.8
Q ss_pred CcceEEEcCCCCEEEEeCCCCE-EEEEcCCC---ceEEc-CCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC
Q 011435 136 HPKGVTMDDKGNLYVADTLNLA-IRKIGDAG---VTTIA-GGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG 210 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~r-Irkid~~G---v~tia-Gg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g 210 (486)
.-..|+++++|++.++=..++. |+..|... +.++. |... ..-..++ ..++|.++++-..
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~---------------~~v~~~~-~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR---------------ADVVDMK-WSTDGSKLAVVSD 260 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC---------------SCEEEEE-ECTTSCEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC---------------CcEEEEE-ECCCCCEEEEEEC
Confidence 3468999999997777666776 99888754 45554 2110 1234566 5778888888888
Q ss_pred CCeEEEEECCC
Q 011435 211 NAALRQISLNQ 221 (486)
Q Consensus 211 n~rIr~id~~G 221 (486)
++.|+.++...
T Consensus 261 d~~v~iw~~~~ 271 (355)
T 3vu4_A 261 KWTLHVFEIFN 271 (355)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEccC
Confidence 88999999864
No 274
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=69.06 E-value=10 Score=40.32 Aligned_cols=73 Identities=8% Similarity=0.035 Sum_probs=44.3
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeC--
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADT-- 153 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~-- 153 (486)
+.++++.+||.+++++ .++.|+.++.+++. ...+.... . ... .....+++++||+ |+++..
T Consensus 18 ~~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~---~~~~~~~~----~-------~~~-~~~~~~~~SpDg~~la~~~~~~ 81 (719)
T 1z68_A 18 TFFPNWISGQEYLHQS-ADNNIVLYNIETGQ---SYTILSNR----T-------MKS-VNASNYGLSPDRQFVYLESDYS 81 (719)
T ss_dssp CCCCEESSSSEEEEEC-TTSCEEEEESSSCC---EEEEECHH----H-------HHT-TTCSEEEECTTSSEEEEEEEEE
T ss_pred CCccEECCCCeEEEEc-CCCCEEEEEcCCCc---EEEEEccc----c-------ccc-cceeeEEECCCCCeEEEEecCc
Confidence 4477888999766555 46689989887542 33333210 0 000 0246899999998 444432
Q ss_pred ------CCCEEEEEcCCC
Q 011435 154 ------LNLAIRKIGDAG 165 (486)
Q Consensus 154 ------~n~rIrkid~~G 165 (486)
....|+.+|.++
T Consensus 82 ~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 82 KLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp ECSSSCEEEEEEEEETTT
T ss_pred eeEEeecceEEEEEECCC
Confidence 136788888765
No 275
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=69.05 E-value=30 Score=39.11 Aligned_cols=71 Identities=13% Similarity=0.150 Sum_probs=45.1
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEe-cccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVA-GSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADT 153 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~va-G~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 153 (486)
....+++++||..+++-...+.|+.++..+.. ...+. +. -.....+++++||. |.++..
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~---~~~~~~~~----------------~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGK---PTVIERSR----------------EAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECS----------------SSCCCCEEECTTSCEEEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCc---eEEeccCC----------------CCCccceEECCCCCeEEEEec
Confidence 46789999999854444455689999986532 33333 21 01236889999998 444432
Q ss_pred ---------CCCEEEEEcCCC
Q 011435 154 ---------LNLAIRKIGDAG 165 (486)
Q Consensus 154 ---------~n~rIrkid~~G 165 (486)
....|+.+|.++
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTT
T ss_pred CccccccCCCCCeEEEEECCC
Confidence 125788888765
No 276
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=68.43 E-value=39 Score=38.14 Aligned_cols=29 Identities=17% Similarity=0.184 Sum_probs=21.9
Q ss_pred CcceEEEcCCCC-EEEEeCCCCEEEEEcCCC
Q 011435 136 HPKGVTMDDKGN-LYVADTLNLAIRKIGDAG 165 (486)
Q Consensus 136 ~P~GIavD~dG~-LYVAD~~n~rIrkid~~G 165 (486)
....++++++|. |+++. ..+.|+.+|..+
T Consensus 380 ~~~~~~~SpDG~~la~~~-~~~~v~~~d~~t 409 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVAN-DRFEIMTVDLET 409 (1045)
T ss_dssp SEEEEEECTTSSEEEEEE-TTSEEEEEETTT
T ss_pred ceeeeEECCCCCEEEEEC-CCCeEEEEECCC
Confidence 457899999998 55554 457899999765
No 277
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=65.77 E-value=26 Score=37.86 Aligned_cols=69 Identities=17% Similarity=0.116 Sum_probs=38.8
Q ss_pred cceEEEcCCCC-E--EEEeC-CCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCC
Q 011435 137 PKGVTMDDKGN-L--YVADT-LNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRG 210 (486)
Q Consensus 137 P~GIavD~dG~-L--YVAD~-~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~g 210 (486)
+..+++.+||. | ++++. +...|+.++.+| ...+..+.. ....+...| ++.||+....
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~----------------~v~~~~~~d-~~~i~f~~~~ 383 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTW----------------EVIGIEALT-SDYLYYISNE 383 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSS----------------CEEEEEEEC-SSEEEEEESC
T ss_pred CCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCE----------------EEEEEEEEe-CCEEEEEEec
Confidence 45678999998 2 34443 346788998876 333332210 001222234 5667776544
Q ss_pred ------CCeEEEEECCCC
Q 011435 211 ------NAALRQISLNQD 222 (486)
Q Consensus 211 ------n~rIr~id~~G~ 222 (486)
...|.+++++|.
T Consensus 384 ~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 384 YKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp GGGCTTCBEEEEEETTEE
T ss_pred CCCCCceeEEEEEECCCC
Confidence 346777777653
No 278
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=65.13 E-value=19 Score=37.85 Aligned_cols=67 Identities=9% Similarity=0.072 Sum_probs=46.4
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeE
Q 011435 138 KGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAAL 214 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rI 214 (486)
..|+++++|..+++=...+.|+.+|... +.++.+.. ...+.|+ ..++|.++++-...+.|
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~----------------~~V~sva-~Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE----------------TTITAIG-VSRLHPMVLAGSADGSL 421 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS----------------SCEEEEE-CCSSCCBCEEEETTTEE
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC----------------CceEEEE-eCCCCCeEEEEECCCEE
Confidence 5799999998888766677898888544 35554421 1234566 46677777777777888
Q ss_pred EEEECCC
Q 011435 215 RQISLNQ 221 (486)
Q Consensus 215 r~id~~G 221 (486)
+.+++.+
T Consensus 422 ~lwd~~~ 428 (524)
T 2j04_B 422 IITNAAR 428 (524)
T ss_dssp ECCBSCS
T ss_pred EEEechH
Confidence 8887654
No 279
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=64.64 E-value=19 Score=40.38 Aligned_cols=79 Identities=6% Similarity=-0.039 Sum_probs=45.6
Q ss_pred eEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCEE
Q 011435 79 KIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAI 158 (486)
Q Consensus 79 GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rI 158 (486)
.+++.+||+++++-..++.|...|..+........+.-......+ ...-.....|+++++|.+.++=..++.|
T Consensus 440 sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~-------~~h~~~V~svafspdg~~LAsgs~DgtV 512 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLN-------KAKELAVDKISFAAETLELAVSIETGDV 512 (902)
T ss_dssp CCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTT-------CSSSCCEEEEEEETTTTEEEEEETTSCE
T ss_pred cccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcC-------CCCCCceeEEEecCCCCeEEEEecCcEE
Confidence 456678899999888889999999764321110000000000000 0011246799999999965555556777
Q ss_pred EEEcCC
Q 011435 159 RKIGDA 164 (486)
Q Consensus 159 rkid~~ 164 (486)
+.++.+
T Consensus 513 ~lwd~~ 518 (902)
T 2oaj_A 513 VLFKYE 518 (902)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 777643
No 280
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=64.37 E-value=33 Score=36.34 Aligned_cols=67 Identities=12% Similarity=0.105 Sum_probs=40.8
Q ss_pred ceeEEEccCCe-EEEEEC--------CCCEEEEEcCCCCcccccEEEecccCCccccCCCCcccccc-CCcceEEEcCCC
Q 011435 77 PYKIRVSEDGE-LFAVDE--------VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARF-NHPKGVTMDDKG 146 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~--------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~L-n~P~GIavD~dG 146 (486)
...+++++||+ |.++.. ..+.|+.++.+++. .+.-. .+ .....+++++||
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~-----~~~~~---------------~l~~~~~~~~~SPDG 121 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGE-----FVRGN---------------ELPRPIQYLCWSPVG 121 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-----ECCSS---------------CCCSSBCCEEECSST
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCc-----cccce---------------ecCcccccceECCCC
Confidence 47889999998 444332 13678888876432 10000 00 134578999999
Q ss_pred C-EEEEeCCCCEEEEEcCCC
Q 011435 147 N-LYVADTLNLAIRKIGDAG 165 (486)
Q Consensus 147 ~-LYVAD~~n~rIrkid~~G 165 (486)
+ |.++. ++.|+.++.++
T Consensus 122 ~~la~~~--~~~i~~~~~~~ 139 (719)
T 1z68_A 122 SKLAYVY--QNNIYLKQRPG 139 (719)
T ss_dssp TCEEEEE--TTEEEEESSTT
T ss_pred CEEEEEE--CCeEEEEeCCC
Confidence 7 55443 46888888754
No 281
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=62.77 E-value=1.1e+02 Score=29.28 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=36.5
Q ss_pred cCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCEEEEEcC
Q 011435 84 EDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAIRKIGD 163 (486)
Q Consensus 84 ~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrkid~ 163 (486)
.+|.||++.. ++.|+.++..... .+... .+..+.+++++ ++.||+++. ++.|..+|.
T Consensus 238 ~~~~v~~~~~-~g~l~~~d~~tG~-----~~w~~---------------~~~~~~~~~~~-~~~l~~~~~-~g~l~~~d~ 294 (376)
T 3q7m_A 238 VNGVVFALAY-NGNLTALDLRSGQ-----IMWKR---------------ELGSVNDFIVD-GNRIYLVDQ-NDRVMALTI 294 (376)
T ss_dssp ETTEEEEECT-TSCEEEEETTTCC-----EEEEE---------------CCCCEEEEEEE-TTEEEEEET-TCCEEEEET
T ss_pred ECCEEEEEec-CcEEEEEECCCCc-----EEeec---------------cCCCCCCceEE-CCEEEEEcC-CCeEEEEEC
Confidence 3678888764 5678888875321 11110 01234567776 678999985 567899986
Q ss_pred CC
Q 011435 164 AG 165 (486)
Q Consensus 164 ~G 165 (486)
..
T Consensus 295 ~t 296 (376)
T 3q7m_A 295 DG 296 (376)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 282
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=61.42 E-value=94 Score=33.15 Aligned_cols=69 Identities=13% Similarity=0.049 Sum_probs=41.2
Q ss_pred eeEEEccCCe-E-EEEECCCC---EEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 78 YKIRVSEDGE-L-FAVDEVNS---NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 78 ~GlAVd~dG~-L-YVaD~~n~---rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
.++++++||+ | |.++.... .|+.++.+++.. ....... . ...++++.+||+ ||++
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~--~~~~~~~--------------~---~~~~~~wspDg~~l~~~ 188 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE--LPDVLER--------------V---KFSCMAWTHDGKGMFYN 188 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE--EEEEEEE--------------E---CSCCEEECTTSSEEEEE
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--CcccccC--------------c---ccceEEEEeCCCEEEEE
Confidence 5788999998 3 44554333 799999875431 1111110 0 134789999987 6655
Q ss_pred eCC---------------CCEEEEEcCCC
Q 011435 152 DTL---------------NLAIRKIGDAG 165 (486)
Q Consensus 152 D~~---------------n~rIrkid~~G 165 (486)
-.. ..+|++.+.++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~t 217 (710)
T 2xdw_A 189 AYPQQDGKSDGTETSTNLHQKLYYHVLGT 217 (710)
T ss_dssp ECCCCSSCCSSSCCCCCCCCEEEEEETTS
T ss_pred EECCccccccccccccCCCCEEEEEECCC
Confidence 432 23588777654
No 283
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=59.99 E-value=70 Score=26.12 Aligned_cols=49 Identities=14% Similarity=0.172 Sum_probs=27.0
Q ss_pred CCCCcEEEccCCcEEEEEecCcccCccceeEEEccCCeEEEEECCCCEEE
Q 011435 50 QADGNVLQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDEVNSNIV 99 (486)
Q Consensus 50 ~~~gsvv~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~~n~rI~ 99 (486)
+.++.++....+..+-.. .....+..+.-+.+..||+|.+.|..+..|.
T Consensus 26 q~DgNLvly~~~~~vW~a-nt~~~~~~~~~L~l~~dGnLvL~d~~~~~vW 74 (105)
T 4h3o_A 26 QDDCNLVLYDHSTSTWAS-NTEIGGKSGCSAVLQSDGNFVVYDSSGRSLW 74 (105)
T ss_dssp CTTSCEEEEETTEEEEEC-CCCCTTCCSCEEEECTTSCEEEECTTCCEEE
T ss_pred CCCCeEEEEECCEEEEEe-cCCCCCCccEEEEEeCCccEEEECCCcEEEE
Confidence 355566555554433221 1111233456688888899888886654443
No 284
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=58.76 E-value=65 Score=32.45 Aligned_cols=72 Identities=11% Similarity=0.023 Sum_probs=48.4
Q ss_pred cceeEEEccC-CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCC
Q 011435 76 VPYKIRVSED-GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTL 154 (486)
Q Consensus 76 ~P~GlAVd~d-G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 154 (486)
...+|++.++ ++++++-..++.|..+|.... ..+... .++ -.....++++++|+.+++=..
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-----~~~~~~----~~~---------~~~v~~v~wspdg~~lasgs~ 212 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-----VKVCAT----LPS---------TVAVTSVCWSPKGKQLAVGKQ 212 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESSS-----EEEEEE----ECG---------GGCEEEEEECTTSSCEEEEET
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-----cceeec----cCC---------CCceeEEEEcCCCCEEEEEcC
Confidence 4678999987 778887777888998887532 111111 000 124679999999984444346
Q ss_pred CCEEEEEcCCC
Q 011435 155 NLAIRKIGDAG 165 (486)
Q Consensus 155 n~rIrkid~~G 165 (486)
++.|+.+|..+
T Consensus 213 dg~v~iwd~~~ 223 (434)
T 2oit_A 213 NGTVVQYLPTL 223 (434)
T ss_dssp TSCEEEECTTC
T ss_pred CCcEEEEccCC
Confidence 78899999886
No 285
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=58.62 E-value=1.4e+02 Score=29.11 Aligned_cols=71 Identities=10% Similarity=-0.037 Sum_probs=40.8
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
-+-|++.+++-|-|+- .+.|+..+..++. ...++-.. ++ -..-+.|+++++|+++++=..++
T Consensus 108 ~~~l~wS~~n~lAvgl--d~tV~lWd~~tg~--~~~~~~~~-----~~---------~~~V~sv~fspdg~~lasgs~Dg 169 (420)
T 4gga_A 108 LNLVDWSSGNVLAVAL--DNSVYLWSASSGD--ILQLLQME-----QP---------GEYISSVAWIKEGNYLAVGTSSA 169 (420)
T ss_dssp CBCEEECTTSEEEEEE--TTEEEEEETTTCC--EEEEEECC-----ST---------TCCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEEECCCCEEEEEe--CCEEEEEECCCCC--EEEEEEec-----CC---------CCcEEEEEECCCCCEEEEEECCC
Confidence 3456676554344432 4678888765432 11122211 00 01236899999999666656678
Q ss_pred EEEEEcCCC
Q 011435 157 AIRKIGDAG 165 (486)
Q Consensus 157 rIrkid~~G 165 (486)
.|+..|...
T Consensus 170 ~v~iWd~~~ 178 (420)
T 4gga_A 170 EVQLWDVQQ 178 (420)
T ss_dssp CEEEEETTT
T ss_pred eEEEEEcCC
Confidence 899888655
No 286
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=58.51 E-value=83 Score=30.68 Aligned_cols=126 Identities=9% Similarity=-0.099 Sum_probs=67.2
Q ss_pred eeEEEcc--------CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-E
Q 011435 78 YKIRVSE--------DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-L 148 (486)
Q Consensus 78 ~GlAVd~--------dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-L 148 (486)
..|++.+ ||+++++-...+.|+..|..... ......+. -.....+++.++|. +
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~--~~~~~~~~----------------~~~v~~v~~~p~~~~~ 201 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG--PILAGYPL----------------SSPGISVQFRPSNPNQ 201 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--EEEEEEEC----------------SSCEEEEEEETTEEEE
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--eeeeecCC----------------CCCcEEEEECCCCCce
Confidence 5677765 78899988888888888864221 11222221 01346889998764 4
Q ss_pred EEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcC-------CC--CccccccCCCceeEEEcCCCeEEEEeCCCCeEEE
Q 011435 149 YVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFR-------DG--PSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQ 216 (486)
Q Consensus 149 YVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~-------DG--~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~ 216 (486)
.++=..++.|+.+|... .............+. .. .........-..+.+..++|...++-..++.|+.
T Consensus 202 l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~v 281 (393)
T 4gq1_A 202 LIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLR 281 (393)
T ss_dssp EEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEE
T ss_pred EEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEE
Confidence 55444578899888644 111111100000000 00 0001111223456656678888888888888888
Q ss_pred EECCC
Q 011435 217 ISLNQ 221 (486)
Q Consensus 217 id~~G 221 (486)
.++..
T Consensus 282 wd~~~ 286 (393)
T 4gq1_A 282 WNLFA 286 (393)
T ss_dssp EEC--
T ss_pred EECcc
Confidence 88764
No 287
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=58.24 E-value=1.1e+02 Score=27.69 Aligned_cols=126 Identities=12% Similarity=0.082 Sum_probs=64.9
Q ss_pred ceeEEEccC--CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC---CCEEEE
Q 011435 77 PYKIRVSED--GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK---GNLYVA 151 (486)
Q Consensus 77 P~GlAVd~d--G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d---G~LYVA 151 (486)
..++++.++ |+++++-..++.|..++......-............ .............++++++ ++++++
T Consensus 113 v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL-----SIPPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC-----SCCCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc-----ccccCCcccceeEEEeccCCCCCcEEEE
Confidence 578999998 887777667789999986533211110110000000 0001122345678888886 675555
Q ss_pred eCCCCEEEEEcC-CC-ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCC----eEEEEeCCCCeEEEEECCC
Q 011435 152 DTLNLAIRKIGD-AG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTC----SLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 152 D~~n~rIrkid~-~G-v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G----~LYVaD~gn~rIr~id~~G 221 (486)
-..++.|...+. .+ ...+.-- . +. -.....++ ..+++ .++++-..++.|+.++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~-~---~h---------~~~i~~~~-~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 188 SALEQAIIYQRGKDGKLHVAAKL-P---GH---------KSLIRSIS-WAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EETTEEEEEEECTTSCEEEEEEC-C---CC---------CSCEEEEE-ECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred ecCCCcEEEEccCCCceeeeeec-C---CC---------CcceeEEE-ECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 444555544433 33 2111110 0 00 01124565 45665 6777777777888888764
No 288
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=55.77 E-value=82 Score=33.57 Aligned_cols=80 Identities=10% Similarity=-0.020 Sum_probs=44.0
Q ss_pred eeEEEccCCe-EEEEECC------------CCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC
Q 011435 78 YKIRVSEDGE-LFAVDEV------------NSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD 144 (486)
Q Consensus 78 ~GlAVd~dG~-LYVaD~~------------n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~ 144 (486)
.++++.+||. |+++... ..+|++++..+... ...++.... + . -..-.++++++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~-~~~lv~~~~----~---~------~~~~~~~~~Sp 236 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS-KDTVVHERT----G---D------PTTFLQSDLSR 236 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG-GCEEEECCC----C---C------TTCEEEEEECT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch-hceEEEecC----C---C------CEEEEEEEECC
Confidence 6789999997 5555432 34588888764321 122333210 0 0 00124788999
Q ss_pred CCC-EEEEe--C-CCCEEEEEcCCC--ceEEcC
Q 011435 145 KGN-LYVAD--T-LNLAIRKIGDAG--VTTIAG 171 (486)
Q Consensus 145 dG~-LYVAD--~-~n~rIrkid~~G--v~tiaG 171 (486)
||. |+++- . .+..|+.++..+ +..+..
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceEEeec
Confidence 998 44432 2 245788887643 555543
No 289
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=55.42 E-value=1.3e+02 Score=29.39 Aligned_cols=65 Identities=11% Similarity=0.097 Sum_probs=35.9
Q ss_pred EEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCEEEE
Q 011435 81 RVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAIRK 160 (486)
Q Consensus 81 AVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrk 160 (486)
++..+|+.+++-..++.|..++..... ....+.|. .+ .-..|++ +|+++++=..++.|+.
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h----~~------------~v~~l~~--~~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLE--CKRILTGH----TG------------SVLCLQY--DERVIITGSSDSTVRV 197 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCC--EEEEECCC----SS------------CEEEEEC--CSSEEEEEETTSCEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCe--EEEEEcCC----CC------------cEEEEEE--CCCEEEEEcCCCeEEE
Confidence 344577777666677788888875322 11222221 00 1234455 5565555555677888
Q ss_pred EcCCC
Q 011435 161 IGDAG 165 (486)
Q Consensus 161 id~~G 165 (486)
+|...
T Consensus 198 wd~~~ 202 (435)
T 1p22_A 198 WDVNT 202 (435)
T ss_dssp EESSS
T ss_pred EECCC
Confidence 87554
No 290
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=54.23 E-value=1.3e+02 Score=27.63 Aligned_cols=112 Identities=9% Similarity=0.065 Sum_probs=58.6
Q ss_pred ceeEEEccC--CeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC---------
Q 011435 77 PYKIRVSED--GELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK--------- 145 (486)
Q Consensus 77 P~GlAVd~d--G~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d--------- 145 (486)
-..+++.++ |.++++-...+.|..++...........+.+. -..-+.++++++
T Consensus 102 v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h----------------~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 102 VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC----------------SSCEEEEEECCCC--------
T ss_pred eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc----------------cCccceEeecCCcccccccCC
Confidence 356777775 77666666677888777653210111222221 011234555553
Q ss_pred ----CCEEEEeCCCCEEEEEcCCC-------ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCC---CeEEEEeCCC
Q 011435 146 ----GNLYVADTLNLAIRKIGDAG-------VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT---CSLLVIDRGN 211 (486)
Q Consensus 146 ----G~LYVAD~~n~rIrkid~~G-------v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~---G~LYVaD~gn 211 (486)
+.++++=..++.|+.+|... +.++.+- -..-..+++ .++ +.++++-...
T Consensus 166 ~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H----------------~~~V~~v~~-sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH----------------SDWVRDVAW-SPTVLLRSYMASVSQD 228 (297)
T ss_dssp ----CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC----------------SSCEEEEEE-CCCCSSSEEEEEEETT
T ss_pred CCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC----------------CCceEEEEE-CCCCCCceEEEEEECC
Confidence 45555555567777776432 1222221 011245653 454 4677777777
Q ss_pred CeEEEEECCC
Q 011435 212 AALRQISLNQ 221 (486)
Q Consensus 212 ~rIr~id~~G 221 (486)
+.|+.++.+.
T Consensus 229 ~~v~iWd~~~ 238 (297)
T 2pm7_B 229 RTCIIWTQDN 238 (297)
T ss_dssp SCEEEEEESS
T ss_pred CcEEEEEeCC
Confidence 8888888764
No 291
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=50.56 E-value=2.1e+02 Score=28.84 Aligned_cols=132 Identities=15% Similarity=0.044 Sum_probs=65.1
Q ss_pred EEccCCcEEEEEecCcccCccceeEEEccCCeEEEEEC------------CCCEEEEEcCCCCcccccEEEecccCCccc
Q 011435 56 LQFENGYLVETVIEGNEIGVVPYKIRVSEDGELFAVDE------------VNSNIVKITPPLSQYSRGRLVAGSFQGYTG 123 (486)
Q Consensus 56 v~~~~G~~vetv~~G~~~~~~P~GlAVd~dG~LYVaD~------------~n~rI~kid~~g~~~~~~~~vaG~~~G~~G 123 (486)
.+...|..+.++..+......-..+++.+||.++++-. ..+.|..+++.++.. ..++.-.. ..|
T Consensus 208 WDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~--l~v~~~~~--p~G 283 (356)
T 2w18_A 208 WNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS--VGVMLYCL--PPG 283 (356)
T ss_dssp EETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEE--EEEEEECC--CTT
T ss_pred EECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE--EEEEEeec--cCC
Confidence 45666766666653322112234568889998765422 234455555543210 11111000 001
Q ss_pred cCCCCccccccCCcceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCc-eeEEEc
Q 011435 124 HVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDF-DVVYVR 199 (486)
Q Consensus 124 ~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~-gIa~vd 199 (486)
+ .+ . -+..+.+|.+.++=..++.|+..|... +.++.|.. ..+. .++ ..
T Consensus 284 h-~~--------~--~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~----------------~~vvs~va-fS 335 (356)
T 2w18_A 284 Q-AG--------R--FLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVS----------------DQHWSFVK-WS 335 (356)
T ss_dssp C-CC--------C--EEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC------------------CCCCEEE-EC
T ss_pred C-cc--------e--eEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCC----------------CCeEEEEE-EC
Confidence 1 00 0 112222355556544456777777554 45554321 0122 244 67
Q ss_pred CCCeEEEEeCCCCeEEEEEC
Q 011435 200 PTCSLLVIDRGNAALRQISL 219 (486)
Q Consensus 200 ~~G~LYVaD~gn~rIr~id~ 219 (486)
++|.++++-..++.|+..+.
T Consensus 336 PDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 336 GTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSSSEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEECCCcEEEecC
Confidence 78888888888888887763
No 292
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=50.45 E-value=1.6e+02 Score=27.33 Aligned_cols=55 Identities=13% Similarity=0.178 Sum_probs=33.4
Q ss_pred ceeEEEccCCe-EEEE-EC---CCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEE
Q 011435 77 PYKIRVSEDGE-LFAV-DE---VNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYV 150 (486)
Q Consensus 77 P~GlAVd~dG~-LYVa-D~---~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYV 150 (486)
...++++|||+ |+++ +. ....|+.++.++.. ...+... . ...+++++++|+ |++
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~---~~~l~~~-------------~----~~~~~~wspdg~~l~~ 120 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS---SKKILEA-------------K----NIRSLEWNEDSRKLLI 120 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE---EEEEEEE-------------S----EEEEEEECTTSSEEEE
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc---eEEEEcC-------------C----CccceeECCCCCEEEE
Confidence 57789999997 5444 32 23458888876532 2322221 0 045788888887 655
Q ss_pred E
Q 011435 151 A 151 (486)
Q Consensus 151 A 151 (486)
+
T Consensus 121 ~ 121 (347)
T 2gop_A 121 V 121 (347)
T ss_dssp E
T ss_pred E
Confidence 5
No 293
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=49.29 E-value=2.8e+02 Score=29.87 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=23.6
Q ss_pred CCCceeEEEcCCCeEEEEeCCCCeEEEEECCCC
Q 011435 190 SNDFDVVYVRPTCSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 190 ~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G~ 222 (486)
.+-+.|.+...+++++|+-+.. .|.+|+.+|.
T Consensus 355 ~HiNsv~~d~~dd~~liSsR~~-~I~~Id~tG~ 386 (571)
T 3elq_A 355 AHVNSIAYDAKDDSIILSSRHQ-GVVKIGRDKQ 386 (571)
T ss_dssp CCEEEEEEETTTTEEEEEETTT-EEEEEETTSC
T ss_pred cEecceeEcCCCCEEEEECCcc-EEEEEcCCCc
Confidence 3446676555567899998888 9999997653
No 294
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=45.41 E-value=2.2e+02 Score=27.63 Aligned_cols=71 Identities=8% Similarity=0.088 Sum_probs=37.2
Q ss_pred cceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCe
Q 011435 137 PKGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAA 213 (486)
Q Consensus 137 P~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~r 213 (486)
...++++ ++++++=..++.|+.+|... +..+..... + ..-.....++ ..+++.++++-..++.
T Consensus 365 v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~--------~~~~~v~~~~-~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 365 VTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLES---G--------GSGGVVWRIR-ASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTT---G--------GGTCEEEEEE-ECSSEEEEEEECSSSS
T ss_pred EEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeecccc---C--------CCCceEEEEE-ecCCEEEEEEcccCCC
Confidence 3456665 45555555668888888543 344421100 0 0001134565 4566766666555554
Q ss_pred ----EEEEECCC
Q 011435 214 ----LRQISLNQ 221 (486)
Q Consensus 214 ----Ir~id~~G 221 (486)
|..++.+.
T Consensus 431 ~~~~l~v~df~~ 442 (445)
T 2ovr_B 431 EETKLLVLDFDV 442 (445)
T ss_dssp SCCEEEEEECCC
T ss_pred CccEEEEEECCC
Confidence 77777664
No 295
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=45.22 E-value=37 Score=37.06 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=58.2
Q ss_pred CCcceEEEcCCCC-EEEEeCCCCEEEEEcCCCc-eEEcCCCCCCCCcCCCCccccc-cCCCceeEEEcCCCeEEEEeCCC
Q 011435 135 NHPKGVTMDDKGN-LYVADTLNLAIRKIGDAGV-TTIAGGKSNVAGFRDGPSEDAK-FSNDFDVVYVRPTCSLLVIDRGN 211 (486)
Q Consensus 135 n~P~GIavD~dG~-LYVAD~~n~rIrkid~~Gv-~tiaGg~~g~~G~~DG~~~~a~-f~~P~gIa~vd~~G~LYVaD~gn 211 (486)
++|.|+-++|||. ++|+.....+|-+|+-.-+ ..|++.. ..+.+-...+.. =..|...+ .|.+|+.|.+-.-.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~---~~~~~~~~ae~e~GlGPlHt~-Fd~~G~aYTtlfid 398 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL---ADPRDVIVGEPELGLGPLHTT-FDGRGNAYTTLFID 398 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC---SCGGGGEEECCBCCSCEEEEE-ECSSSEEEEEETTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc---cCcccceEeeccCCCcccEEE-ECCCCceEeeeeec
Confidence 7899999999998 8888888899998885541 1111110 000000000000 02478887 57889999999999
Q ss_pred CeEEEEECCCCceeecc
Q 011435 212 AALRQISLNQDDCEYQY 228 (486)
Q Consensus 212 ~rIr~id~~G~~~~~~~ 228 (486)
.+|.+++++.....|.+
T Consensus 399 SqvvkWni~~a~~~~~g 415 (638)
T 3sbq_A 399 SQVVKWNMEEAVRAYKG 415 (638)
T ss_dssp TEEEEEEHHHHHHHHTT
T ss_pred ceEEEEeccHHHHHhcC
Confidence 99999988754444433
No 296
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=43.42 E-value=2.1e+02 Score=30.39 Aligned_cols=46 Identities=20% Similarity=0.082 Sum_probs=27.8
Q ss_pred CcEEEEEecCcccC----ccceeEEEccCCe--EEEEECCC---CEEEEEcCCCC
Q 011435 61 GYLVETVIEGNEIG----VVPYKIRVSEDGE--LFAVDEVN---SNIVKITPPLS 106 (486)
Q Consensus 61 G~~vetv~~G~~~~----~~P~GlAVd~dG~--LYVaD~~n---~rI~kid~~g~ 106 (486)
+...+.+.+.+... ..-.++++++||+ +|..|... ..|+.++.+++
T Consensus 103 ~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg 157 (695)
T 2bkl_A 103 SGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG 157 (695)
T ss_dssp TSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC
T ss_pred CCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC
Confidence 34455565544321 1235788999998 35555433 57999998754
No 297
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=43.16 E-value=51 Score=32.24 Aligned_cols=70 Identities=9% Similarity=0.053 Sum_probs=44.4
Q ss_pred cceEEEcC--------CCCEEEEeCCCCEEEEEcCC-C--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEE
Q 011435 137 PKGVTMDD--------KGNLYVADTLNLAIRKIGDA-G--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLL 205 (486)
Q Consensus 137 P~GIavD~--------dG~LYVAD~~n~rIrkid~~-G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LY 205 (486)
=+.|++.+ +|.++++=...+.|+..|.. + +..+.+.. .....+++...+.+++
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~----------------~~v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS----------------SPGISVQFRPSNPNQL 202 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS----------------SCEEEEEEETTEEEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC----------------CCcEEEEECCCCCceE
Confidence 45788875 77888887777888888853 2 33333321 1124566544444567
Q ss_pred EEeCCCCeEEEEECCCC
Q 011435 206 VIDRGNAALRQISLNQD 222 (486)
Q Consensus 206 VaD~gn~rIr~id~~G~ 222 (486)
++-..++.|+.+|....
T Consensus 203 ~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 203 IVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEETTSEEEEEETTCC
T ss_pred EecCCCCEEEEEECCCC
Confidence 77777888999987753
No 298
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=41.80 E-value=2.8e+02 Score=28.80 Aligned_cols=112 Identities=13% Similarity=0.051 Sum_probs=66.1
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceE--EEcCCC-CEEEEeC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGV--TMDDKG-NLYVADT 153 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GI--avD~dG-~LYVAD~ 153 (486)
-.++++.+++ .+++-..++.|..+|...... ....+.+. . ..-..| ++.++| +++++=.
T Consensus 269 v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~-~~~~~~~H--------~--------~~V~sv~~~~s~~g~~~laS~S 330 (524)
T 2j04_B 269 ITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEV-PSFYDQVH--------D--------SYILSVSTAYSDFEDTVVSTVA 330 (524)
T ss_dssp EEEEEESSSS-EEEEEETTSEEEEEETTBCSS-CSEEEECS--------S--------SCEEEEEEECCTTSCCEEEEEE
T ss_pred EEEEEecCCC-eEEEEeCCCEEEEEECCCCCC-ceEEeecc--------c--------ccEEEEEEEcCCCCCeEEEEec
Confidence 3567777665 455556778999998763210 11122221 0 112456 456677 7877777
Q ss_pred CCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECCC
Q 011435 154 LNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQ 221 (486)
Q Consensus 154 ~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~G 221 (486)
.++.|+..|... +.++.+... + .....+++ .+++..+++-...+.|+.++...
T Consensus 331 ~D~tvklWD~~~~~~~~~~~~~~~-------~-------~~v~~v~f-sp~~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 331 VDGYFYIFNPKDIATTKTTVSRFR-------G-------SNLVPVVY-CPQIYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp TTSEEEEECGGGHHHHCEEEEECS-------C-------CSCCCEEE-ETTTTEEEEECSSSEEEEEETTC
T ss_pred cCCeEEEEECCCCCcccccccccc-------c-------CcccceEe-CCCcCeEEEeCCCCcEEEEECcc
Confidence 788999998654 344433210 0 01235664 56677777777778899988764
No 299
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=40.96 E-value=2.6e+02 Score=27.14 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=32.8
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeE
Q 011435 138 KGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAAL 214 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rI 214 (486)
..+++ +|+++++=..++.|+.+|... +.++.+... ....++ .++.++++-..++.|
T Consensus 260 ~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----------------~v~~~~---~~~~~l~~g~~dg~i 318 (435)
T 1p22_A 260 NVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR----------------GIACLQ---YRDRLVVSGSSDNTI 318 (435)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSS----------------CEEEEE---EETTEEEEEETTSCE
T ss_pred EEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCC----------------cEEEEE---eCCCEEEEEeCCCeE
Confidence 35555 455444444568888888654 444433210 012232 234455555556677
Q ss_pred EEEECCC
Q 011435 215 RQISLNQ 221 (486)
Q Consensus 215 r~id~~G 221 (486)
+.++...
T Consensus 319 ~iwd~~~ 325 (435)
T 1p22_A 319 RLWDIEC 325 (435)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 7777664
No 300
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=40.51 E-value=3.6e+02 Score=28.62 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=20.8
Q ss_pred ceEEEcCCCC-EEEEeC---CCCEEEEEcCCC----ceEEcC
Q 011435 138 KGVTMDDKGN-LYVADT---LNLAIRKIGDAG----VTTIAG 171 (486)
Q Consensus 138 ~GIavD~dG~-LYVAD~---~n~rIrkid~~G----v~tiaG 171 (486)
.++++++||. |+++-. ..+.|+.++.++ +..+..
T Consensus 237 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp EEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred EEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 3678899998 444322 235888888533 455543
No 301
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=38.62 E-value=2.1e+02 Score=30.67 Aligned_cols=14 Identities=7% Similarity=0.439 Sum_probs=9.4
Q ss_pred ceEEEcCCCC-EEEE
Q 011435 138 KGVTMDDKGN-LYVA 151 (486)
Q Consensus 138 ~GIavD~dG~-LYVA 151 (486)
.++++|++.. +||.
T Consensus 384 ~~~a~dp~~g~~yv~ 398 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIP 398 (668)
T ss_dssp SCCEEETTTTEEEEE
T ss_pred CcceECCCCCEEEEe
Confidence 4589998644 6763
No 302
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=38.60 E-value=1.8e+02 Score=29.43 Aligned_cols=68 Identities=9% Similarity=0.033 Sum_probs=37.6
Q ss_pred ceeEEEccCCe-EEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCC
Q 011435 77 PYKIRVSEDGE-LFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLN 155 (486)
Q Consensus 77 P~GlAVd~dG~-LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n 155 (486)
++.|++ ||+ |+|+ .++.|..++...-. ........ ......-++..|+-++++.+|.|++.|..+
T Consensus 90 V~~l~f--d~~~L~v~--~~~~l~v~dv~sl~--~~~~~~~~--------~~~v~~i~~~~p~~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS--TRNALYSLDLEELS--EFRTVTSF--------EKPVFQLKNVNNTLVILNSVNDLSALDLRT 155 (388)
T ss_dssp EEEEEE--ETTEEEEE--ESSEEEEEESSSTT--CEEEEEEC--------SSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred eeEEEE--CCCEEEEE--cCCcEEEEEchhhh--ccCcccee--------ecceeeEEecCCCEEEEECCCCEEEEEccC
Confidence 788899 555 7777 45789999875322 11111110 000111234456555556788888888765
Q ss_pred CEE
Q 011435 156 LAI 158 (486)
Q Consensus 156 ~rI 158 (486)
+..
T Consensus 156 ~~~ 158 (388)
T 1xip_A 156 KST 158 (388)
T ss_dssp CCE
T ss_pred Ccc
Confidence 544
No 303
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=38.26 E-value=2.9e+02 Score=26.82 Aligned_cols=31 Identities=13% Similarity=0.286 Sum_probs=18.5
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEcCCC---ceEEc
Q 011435 138 KGVTMDDKGNLYVADTLNLAIRKIGDAG---VTTIA 170 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~n~rIrkid~~G---v~tia 170 (486)
..++++ |+++++-..++.|+.+|... +.++.
T Consensus 323 ~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 323 SGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 345554 55555555677888888643 44554
No 304
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=37.90 E-value=2.6e+02 Score=29.81 Aligned_cols=25 Identities=12% Similarity=0.303 Sum_probs=14.7
Q ss_pred EEcCCCC-EEEEeCCC--CEEEEEcCCC
Q 011435 141 TMDDKGN-LYVADTLN--LAIRKIGDAG 165 (486)
Q Consensus 141 avD~dG~-LYVAD~~n--~rIrkid~~G 165 (486)
.++++|+ |+++-..+ .+|++++.+|
T Consensus 332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 4444455 55554333 3788888777
No 305
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=36.87 E-value=2e+02 Score=29.03 Aligned_cols=71 Identities=21% Similarity=0.231 Sum_probs=47.5
Q ss_pred ccCCe--EEEEECCCC--EEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcc-eEEEcCCCCEEEEeCCCCE
Q 011435 83 SEDGE--LFAVDEVNS--NIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPK-GVTMDDKGNLYVADTLNLA 157 (486)
Q Consensus 83 d~dG~--LYVaD~~n~--rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~-GIavD~dG~LYVAD~~n~r 157 (486)
+.+|. ||+-+...+ .|..+|.+.....+ ++..-. .|-.| +..+. ++-+..+..|||.+....+
T Consensus 35 ~~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k-~i~~ek-EGPNg----------i~~~~~~~~i~~~DsI~i~~~~~~~ 102 (369)
T 3s9j_A 35 EENGKEYLHFENTQKSLYDIVIFDIENQQIAK-RIPLHK-TGPNG----------LPAVFGSRPSPDSQYILVAQNNISR 102 (369)
T ss_dssp EETTEEEEEEEECSTTCCEEEEEETTTTEEEE-EEECBS-SSTTB----------CTTCCCEEESSSTTSEEEEEGGGTE
T ss_pred ecCCcEEEEEeCCCCCcCcEEEEECCCCceee-eecccc-CCCCC----------cccceeeEEecCCCEEEEEeCCcce
Confidence 35665 788888888 99999997432111 111111 12222 33563 5777778889999988889
Q ss_pred EEEEcCCC
Q 011435 158 IRKIGDAG 165 (486)
Q Consensus 158 Irkid~~G 165 (486)
|..||..|
T Consensus 103 i~l~n~~G 110 (369)
T 3s9j_A 103 LSSINSQG 110 (369)
T ss_dssp EEEECTTC
T ss_pred EEEECCCc
Confidence 99999999
No 306
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=35.56 E-value=1.5e+02 Score=24.36 Aligned_cols=22 Identities=14% Similarity=0.096 Sum_probs=16.3
Q ss_pred ceEEEcCCCCEEEEeCCCCEEE
Q 011435 138 KGVTMDDKGNLYVADTLNLAIR 159 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~n~rIr 159 (486)
.-+.+..+|+|++.|..+..|+
T Consensus 59 ~~l~l~~dGNLVl~d~~~~~iW 80 (113)
T 3mez_B 59 CFMRLGHSGELDITDDRLNTVF 80 (113)
T ss_dssp CEEEECTTSCEEEECTTSCEEE
T ss_pred EEEEEeCCCcEEEECCCCCEEE
Confidence 4578888999999987554444
No 307
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=34.48 E-value=4.5e+02 Score=28.01 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=16.2
Q ss_pred eEEEcCCCeEEEEeCCCCeEE
Q 011435 195 VVYVRPTCSLLVIDRGNAALR 215 (486)
Q Consensus 195 Ia~vd~~G~LYVaD~gn~rIr 215 (486)
+++.+.+|.||+.|+.++.+.
T Consensus 317 v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 317 LMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEECCTTSEEEEEETTTCCEE
T ss_pred EEEECCCCEEEEEECCCCCEe
Confidence 444567889999999888765
No 308
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=32.00 E-value=2e+02 Score=23.22 Aligned_cols=25 Identities=16% Similarity=0.233 Sum_probs=19.7
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEE
Q 011435 136 HPKGVTMDDKGNLYVADTLNLAIRK 160 (486)
Q Consensus 136 ~P~GIavD~dG~LYVAD~~n~rIrk 160 (486)
.+.-+.+..||+|.+.|..+..|+.
T Consensus 51 ~~~~L~l~~dGnLvL~d~~~~~vWs 75 (105)
T 4h3o_A 51 SGCSAVLQSDGNFVVYDSSGRSLWA 75 (105)
T ss_dssp CSCEEEECTTSCEEEECTTCCEEEE
T ss_pred ccEEEEEeCCccEEEECCCcEEEEE
Confidence 3557889999999999987766664
No 309
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=31.19 E-value=5.1e+02 Score=27.65 Aligned_cols=15 Identities=7% Similarity=0.388 Sum_probs=10.7
Q ss_pred ceEEEcCCCC-EEEEe
Q 011435 138 KGVTMDDKGN-LYVAD 152 (486)
Q Consensus 138 ~GIavD~dG~-LYVAD 152 (486)
.++++|+++. +||..
T Consensus 396 ~~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPA 411 (677)
T ss_dssp SCCEEETTTTEEEEEE
T ss_pred CCceEcCCCCEEEEeC
Confidence 4789998655 77753
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=30.80 E-value=3.5e+02 Score=25.64 Aligned_cols=107 Identities=7% Similarity=0.046 Sum_probs=55.0
Q ss_pred ceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCC
Q 011435 77 PYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNL 156 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~ 156 (486)
+.+|++..++.+|++.. .+.|++-+ |+.. ....+... .. ..-.+|+++++|.+|++.. ++
T Consensus 124 ~~~i~~~~~~~~~~~~~-~g~v~~S~-DgG~--tW~~~~~~---~~------------~~~~~~~~~~~~~~~~~g~-~G 183 (327)
T 2xbg_A 124 PRLIKALGNGSAEMITN-VGAIYRTK-DSGK--NWQALVQE---AI------------GVMRNLNRSPSGEYVAVSS-RG 183 (327)
T ss_dssp EEEEEEEETTEEEEEET-TCCEEEES-STTS--SEEEEECS---CC------------CCEEEEEECTTSCEEEEET-TS
T ss_pred eEEEEEECCCCEEEEeC-CccEEEEc-CCCC--CCEEeecC---CC------------cceEEEEEcCCCcEEEEEC-CC
Confidence 45677767778887764 34566543 3222 11222110 00 1235788888888887764 34
Q ss_pred EEEEEcCC-C--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeEEEEECC
Q 011435 157 AIRKIGDA-G--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLN 220 (486)
Q Consensus 157 rIrkid~~-G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rIr~id~~ 220 (486)
.|++-+.. | .+.+.... . .....++ .++++.+|++-. ++.|++-+.+
T Consensus 184 ~~~~S~d~gG~tW~~~~~~~------------~---~~~~~~~-~~~~g~~~~~~~-~G~~~~s~~D 233 (327)
T 2xbg_A 184 SFYSTWEPGQTAWEPHNRTT------------S---RRLHNMG-FTPDGRLWMIVN-GGKIAFSDPD 233 (327)
T ss_dssp SEEEEECTTCSSCEEEECCS------------S---SCEEEEE-ECTTSCEEEEET-TTEEEEEETT
T ss_pred cEEEEeCCCCCceeECCCCC------------C---CccceeE-ECCCCCEEEEeC-CceEEEecCC
Confidence 56665443 4 23332110 0 1123555 567778887764 3455554334
No 311
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=30.79 E-value=2.1e+02 Score=23.09 Aligned_cols=22 Identities=32% Similarity=0.330 Sum_probs=16.8
Q ss_pred ceEEEcCCCCEEEEeCCCCEEE
Q 011435 138 KGVTMDDKGNLYVADTLNLAIR 159 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~n~rIr 159 (486)
.-+.+..+|+|++-|..+..|+
T Consensus 52 ~~l~l~~dGNLvl~~~~~~~~W 73 (109)
T 3dzw_A 52 CHLSMQSDGNLVVYSPRNNPIW 73 (109)
T ss_dssp CEEEECTTSCEEEECTTSCEEE
T ss_pred EEEEEeCCCCEEEECCCCCEEE
Confidence 4678888999999987555555
No 312
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=30.14 E-value=1.7e+02 Score=29.65 Aligned_cols=115 Identities=16% Similarity=0.105 Sum_probs=60.6
Q ss_pred cceeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEE-EecccCCccccCCCCccccccCCcceEEEcCCCC-EEEEeC
Q 011435 76 VPYKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRL-VAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVADT 153 (486)
Q Consensus 76 ~P~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~-vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 153 (486)
.-+-|++.+.+.++++-..+ .++.++.+. ... +... .+.. .......+..+..|++ +|+ |+|+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~-----l~~~~~~~-~~~~----~~~~~~~lp~V~~l~f--d~~~L~v~-- 103 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQL-----LRDHITSD-STPL----TFKWEKEIPDVIFVCF--HGDQVLVS-- 103 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHH-----HHHHHHSS-SCCC----CCSEEEECTTEEEEEE--ETTEEEEE--
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhH-----hhhhhccc-cccc----cceEEeeCCCeeEEEE--CCCEEEEE--
Confidence 35778999888877766544 555565321 000 0000 0000 0001112334789999 555 8888
Q ss_pred CCCEEEEEcCCCc---eEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeE
Q 011435 154 LNLAIRKIGDAGV---TTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAAL 214 (486)
Q Consensus 154 ~n~rIrkid~~Gv---~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rI 214 (486)
.++.|+.+|...+ ..+.. +.-. ...-++..|+ ++++..+|.|++.|-.++..
T Consensus 104 ~~~~l~v~dv~sl~~~~~~~~-------~~~~-v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~ 158 (388)
T 1xip_A 104 TRNALYSLDLEELSEFRTVTS-------FEKP-VFQLKNVNNT-LVILNSVNDLSALDLRTKST 158 (388)
T ss_dssp ESSEEEEEESSSTTCEEEEEE-------CSSC-EEEEEECSSE-EEEEETTSEEEEEETTTCCE
T ss_pred cCCcEEEEEchhhhccCccce-------eecc-eeeEEecCCC-EEEEECCCCEEEEEccCCcc
Confidence 4578999986551 11111 0000 0112333443 77788899999999875543
No 313
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=30.02 E-value=1.4e+02 Score=27.76 Aligned_cols=72 Identities=11% Similarity=0.142 Sum_probs=43.1
Q ss_pred ceeEEEcc--CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCC--CCEEEEe
Q 011435 77 PYKIRVSE--DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDK--GNLYVAD 152 (486)
Q Consensus 77 P~GlAVd~--dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d--G~LYVAD 152 (486)
-..|++.+ +|+++++-...+.|...+...........+.+. -..-+.|+++++ |.++++=
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h----------------~~~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH----------------DSSVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCC----------------SSCCCEEEECCTTTCSCEEEE
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCC----------------CCceEEEEECCCCCCcEEEEE
Confidence 36788864 478777777778888888763211111122221 113468888886 6666665
Q ss_pred CCCCEEEEEcCC
Q 011435 153 TLNLAIRKIGDA 164 (486)
Q Consensus 153 ~~n~rIrkid~~ 164 (486)
..++.|+.++..
T Consensus 124 s~D~~i~lwd~~ 135 (316)
T 3bg1_A 124 SSDGAISLLTYT 135 (316)
T ss_dssp CSSSCEEEEEEC
T ss_pred cCCCCEEEEecC
Confidence 566777776643
No 314
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=28.18 E-value=3.3e+02 Score=29.47 Aligned_cols=73 Identities=12% Similarity=0.045 Sum_probs=39.0
Q ss_pred eeEEEccCCe-EEEEECC-C---CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCC-EEEE
Q 011435 78 YKIRVSEDGE-LFAVDEV-N---SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGN-LYVA 151 (486)
Q Consensus 78 ~GlAVd~dG~-LYVaD~~-n---~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 151 (486)
.++++.+||+ ||++... . .+|++++..+... ....+.... + ..+ -.++.+++||. |+++
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~-~~~lv~~~~-------~-----~~~--~~~~~~SpDg~~l~~~ 288 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS-EDVCLYEEH-------N-----PLF--SAFMYKAADTNTLCIG 288 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG-GCEEEEECC-------C-----TTC--EEEEEECTTSSEEEEE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch-hcEEEEecC-------C-----Cce--EEEEEECCCCCEEEEE
Confidence 4678888885 5554332 1 3688887754321 112222210 0 011 14678899998 4443
Q ss_pred e-C-CCCEEEEEcCCC
Q 011435 152 D-T-LNLAIRKIGDAG 165 (486)
Q Consensus 152 D-~-~n~rIrkid~~G 165 (486)
- . .+..|+.+|.++
T Consensus 289 ~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 289 SQSPETAEVHLLDLRK 304 (751)
T ss_dssp EECSSCEEEEEEESSS
T ss_pred ecCCCCceEEEEECCC
Confidence 3 2 356788887654
No 315
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=26.84 E-value=2.4e+02 Score=28.47 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=48.7
Q ss_pred EcCCCC--EEEEeCCCC--EEEEEcCCC---ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeCCCCeE
Q 011435 142 MDDKGN--LYVADTLNL--AIRKIGDAG---VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAAL 214 (486)
Q Consensus 142 vD~dG~--LYVAD~~n~--rIrkid~~G---v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~gn~rI 214 (486)
++.+|. ||.-+...+ .|.++|.+. +..+.-...|-.| +..+.+...+-..+.|||.+....+|
T Consensus 34 ~~~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNg----------i~~~~~~~~i~~~DsI~i~~~~~~~i 103 (369)
T 3s9j_A 34 FEENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNG----------LPAVFGSRPSPDSQYILVAQNNISRL 103 (369)
T ss_dssp EEETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTB----------CTTCCCEEESSSTTSEEEEEGGGTEE
T ss_pred EecCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCC----------cccceeeEEecCCCEEEEEeCCcceE
Confidence 335664 888888888 999999877 3344322211111 22353333466788899999888899
Q ss_pred EEEECCCCceee
Q 011435 215 RQISLNQDDCEY 226 (486)
Q Consensus 215 r~id~~G~~~~~ 226 (486)
..|+..|+...-
T Consensus 104 ~l~n~~G~~~~k 115 (369)
T 3s9j_A 104 SSINSQGEIIRN 115 (369)
T ss_dssp EEECTTCCEEEE
T ss_pred EEECCCceEEEE
Confidence 999998864433
No 316
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=26.36 E-value=5.9e+02 Score=26.75 Aligned_cols=116 Identities=10% Similarity=0.040 Sum_probs=63.3
Q ss_pred ceeEEEcc-CCeEEEEECCC-----------CEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcC
Q 011435 77 PYKIRVSE-DGELFAVDEVN-----------SNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDD 144 (486)
Q Consensus 77 P~GlAVd~-dG~LYVaD~~n-----------~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~ 144 (486)
+...++.+ +|.|||.-..+ ..+.++|+....+......-. .+-..-.++++..
T Consensus 188 ~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~---------------~~~~~~~~~~~~~ 252 (656)
T 1k3i_A 188 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT---------------KHDMFCPGISMDG 252 (656)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC---------------SCCCSSCEEEECT
T ss_pred ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC---------------CCCCccccccCCC
Confidence 55777776 88999874211 257888876544322211110 0111234678878
Q ss_pred CCCEEEEeCC-CCEEEEEcCCC--ceEEcCCCCCCCCcCCCCccccccCCCceeEEEcCCCeEEEEeC-C-----CCeEE
Q 011435 145 KGNLYVADTL-NLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPTCSLLVIDR-G-----NAALR 215 (486)
Q Consensus 145 dG~LYVAD~~-n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f~~P~gIa~vd~~G~LYVaD~-g-----n~rIr 215 (486)
+|.|||.=.. ...++++|+.. -+.+..- . ..+ .. ..++ +-++|.|||.-- . ...+.
T Consensus 253 ~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~-~-----------~~R-~~-~s~~-~~~dg~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 253 NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDM-Q-----------VAR-GY-QSSA-TMSDGRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp TSCEEEECSSSTTCEEEEEGGGTEEEECCCC-S-----------SCC-SS-CEEE-ECTTSCEEEECCCCCSSSCCCCEE
T ss_pred CCCEEEeCCCCCCceEEecCcCCceeECCCC-C-----------ccc-cc-cceE-EecCCeEEEEeCcccCCcccccce
Confidence 8999998542 34788998765 2222110 0 011 11 1233 345788888754 1 25688
Q ss_pred EEECCCC
Q 011435 216 QISLNQD 222 (486)
Q Consensus 216 ~id~~G~ 222 (486)
++|+...
T Consensus 318 ~yd~~t~ 324 (656)
T 1k3i_A 318 VYSPSSK 324 (656)
T ss_dssp EEETTTT
T ss_pred EeCCCCC
Confidence 8887654
No 317
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=25.82 E-value=2.6e+02 Score=22.57 Aligned_cols=23 Identities=30% Similarity=0.423 Sum_probs=16.7
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEE
Q 011435 138 KGVTMDDKGNLYVADTLNLAIRK 160 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~n~rIrk 160 (486)
.-+.+..+|+|.+-|..+..|+.
T Consensus 53 ~~l~l~~dGNLVl~~~~~~~~W~ 75 (110)
T 3a0c_A 53 CRLTLHNNGNLVIYDQSNRVIWQ 75 (110)
T ss_dssp CEEEECTTSCEEEECTTCCEEEE
T ss_pred EEEEEeCCCCEEEECCCCcEEEe
Confidence 45778889999998875555553
No 318
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=25.48 E-value=4.6e+02 Score=25.29 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=0.0
Q ss_pred eeEEEcc---CCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcc----------------
Q 011435 78 YKIRVSE---DGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPK---------------- 138 (486)
Q Consensus 78 ~GlAVd~---dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~---------------- 138 (486)
..|++++ ++.||+.-. .+.|++.+-.|..+........ .|.
T Consensus 118 ~~l~~~~~~~~~~l~~g~~-~ggl~~S~DgG~tW~~~~~~~~-------------------~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 118 FWLTPGHASEPGTWYAGTS-PQGLFRSTDHGASWEPVAGFND-------------------HPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp EEEEECCTTSTTCEEEEEE-TTEEEEESSTTSBCEECHHHHT-------------------CTTHHHHHCCC----CCCC
T ss_pred eEEEeCCCCCCCEEEEEec-CCcEEEEcCCCCCeEECcCccC-------------------CccccccccccccCCCCCC
Q ss_pred ---eEEEcC--CCCEEEEeCCCCEEEEEcCCC--ceEEcCCCCCCCCcCCCCcccccc---------CCCceeEEEcCC-
Q 011435 139 ---GVTMDD--KGNLYVADTLNLAIRKIGDAG--VTTIAGGKSNVAGFRDGPSEDAKF---------SNDFDVVYVRPT- 201 (486)
Q Consensus 139 ---GIavD~--dG~LYVAD~~n~rIrkid~~G--v~tiaGg~~g~~G~~DG~~~~a~f---------~~P~gIa~vd~~- 201 (486)
.|++|+ .+.|||+....+ |.+.+..| .+.+..+ ....+ .....|+ +++.
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~gg-l~~s~DgG~tW~~~~~~------------~~~~~~p~~~~~~g~~~~~i~-~~~~~ 243 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGG-VFESTDAGTDWKPLNRG------------CAANFLPDPNVEFGHDPHCVV-QHPAA 243 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBE-EEEESSTTSSCEECCTT------------CCCTTSSSSSSSSCBCEEEEE-ECSSS
T ss_pred ceeEEEECCCCCCEEEEEECCCC-EEEECCCCCCceECCCC------------ccccccCCCccccCcceeEEE-ECCCC
Q ss_pred -CeEEEEeCCCCeEEEEECCCC
Q 011435 202 -CSLLVIDRGNAALRQISLNQD 222 (486)
Q Consensus 202 -G~LYVaD~gn~rIr~id~~G~ 222 (486)
+.||+.. .+.|.+.+-.|.
T Consensus 244 ~~~l~vg~--~~gl~~s~D~G~ 263 (394)
T 3b7f_A 244 PDILYQQN--HCGIYRMDRREG 263 (394)
T ss_dssp TTEEEEEE--TTEEEEEETTTT
T ss_pred CCEEEEEc--CCeEEEeCCCCC
No 319
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=24.39 E-value=2.8e+02 Score=22.36 Aligned_cols=21 Identities=29% Similarity=0.279 Sum_probs=15.1
Q ss_pred ceEEEcCCCCEEEEeCCCCEEE
Q 011435 138 KGVTMDDKGNLYVADTLNLAIR 159 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~n~rIr 159 (486)
.-+.+..+|+|.+-| .+..|+
T Consensus 52 ~~l~l~~~GNLvl~d-~~~~~W 72 (112)
T 1xd5_A 52 CVLKMQNDGNLVIYS-GSRAIW 72 (112)
T ss_dssp EEEEECTTSCEEEEE-TTEEEE
T ss_pred EEEEEeCCCCEEEEc-CCEEEE
Confidence 457788899999998 443444
No 320
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=22.80 E-value=2.2e+02 Score=23.20 Aligned_cols=22 Identities=23% Similarity=0.217 Sum_probs=16.6
Q ss_pred ceEEEcCCCCEEEEeCCCCEEE
Q 011435 138 KGVTMDDKGNLYVADTLNLAIR 159 (486)
Q Consensus 138 ~GIavD~dG~LYVAD~~n~rIr 159 (486)
.-+.+..+|+|++.|..+..|+
T Consensus 56 ~~l~l~~dGNLvl~d~~~~~iW 77 (110)
T 3r0e_B 56 CFLRLNHKGELIIKDDDFKTIW 77 (110)
T ss_dssp CEEEECTTSCEEEECTTCCEEE
T ss_pred EEEEEeCCCcEEEEeCCCCEEE
Confidence 4678888999999987555544
No 321
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=22.38 E-value=7.3e+02 Score=26.44 Aligned_cols=24 Identities=17% Similarity=0.277 Sum_probs=16.2
Q ss_pred eEEEcCCCeEEEEeCCCCeE-EEEE
Q 011435 195 VVYVRPTCSLLVIDRGNAAL-RQIS 218 (486)
Q Consensus 195 Ia~vd~~G~LYVaD~gn~rI-r~id 218 (486)
+++.+.+|.||+.|..++.+ +.+.
T Consensus 330 l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 330 ILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCEEEEEECCCCCEecccc
Confidence 44456788899999877754 4443
No 322
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.83 E-value=1.6e+02 Score=24.16 Aligned_cols=23 Identities=9% Similarity=0.232 Sum_probs=16.7
Q ss_pred cceEEEcCCCCEEEEeCCCCE-EE
Q 011435 137 PKGVTMDDKGNLYVADTLNLA-IR 159 (486)
Q Consensus 137 P~GIavD~dG~LYVAD~~n~r-Ir 159 (486)
+.-+.+..+|+|++-|..+.. |+
T Consensus 51 ~~~l~l~~dGNLVl~~~~~~~~vW 74 (111)
T 3mez_A 51 DCTLRLNNRGQLEIHSANSNTPVW 74 (111)
T ss_dssp SCEEEECTTSCEEEECSSCSSCSE
T ss_pred CEEEEEcCCCcEEEEeCCCCEEEE
Confidence 356788889999998865443 55
No 323
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=21.36 E-value=2.8e+02 Score=22.49 Aligned_cols=19 Identities=21% Similarity=0.326 Sum_probs=12.8
Q ss_pred ceeEEEccCCeEEEEECCC
Q 011435 77 PYKIRVSEDGELFAVDEVN 95 (486)
Q Consensus 77 P~GlAVd~dG~LYVaD~~n 95 (486)
+.-+.++.||+|++.|..+
T Consensus 50 ~~~l~l~~dGnLvl~d~~~ 68 (109)
T 3r0e_A 50 DCKLTLTDYGELVIKNGDG 68 (109)
T ss_dssp SCEEEECTTSCEEEECTTS
T ss_pred cEEEEEcCCCeEEEEeCCC
Confidence 3456677788888777544
No 324
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=20.38 E-value=4.6e+02 Score=23.33 Aligned_cols=70 Identities=10% Similarity=0.001 Sum_probs=41.7
Q ss_pred eeEEEccCCeEEEEECCCCEEEEEcCCCCcccccEEEecccCCccccCCCCccccccCCcceEEEcCCCCEEEEeCCCCE
Q 011435 78 YKIRVSEDGELFAVDEVNSNIVKITPPLSQYSRGRLVAGSFQGYTGHVDGKPNEARFNHPKGVTMDDKGNLYVADTLNLA 157 (486)
Q Consensus 78 ~GlAVd~dG~LYVaD~~n~rI~kid~~g~~~~~~~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~n~r 157 (486)
+.|++++++-|-++ ..+.|+..|...+. ...++.+. ++ -..-..|+++++|++.++=..++.
T Consensus 29 ~~l~WS~~~~lAvg--~D~tV~iWd~~tg~--~~~~~~~~-----~~---------~~~V~~v~~~~~~~~l~sgs~Dg~ 90 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA--LDNSVYLWSASSGD--ILQLLQME-----QP---------GEYISSVAWIKEGNYLAVGTSSAE 90 (318)
T ss_dssp BCEEECTTSEEEEE--ETTEEEEEETTTCC--EEEEEECC-----ST---------TCCEEEEEECTTSSEEEEEETTSE
T ss_pred eEEEECCCCEEEEE--eCCEEEEEECCCCC--EEEEEEec-----CC---------CCeEEEEEECCCCCEEEEEECCCc
Confidence 45777776533333 25678888876432 11222221 00 012358999999997777667788
Q ss_pred EEEEcCCC
Q 011435 158 IRKIGDAG 165 (486)
Q Consensus 158 Irkid~~G 165 (486)
|+..+...
T Consensus 91 v~iw~~~~ 98 (318)
T 4ggc_A 91 VQLWDVQQ 98 (318)
T ss_dssp EEEEETTT
T ss_pred EEEeecCC
Confidence 99888665
Done!