Query 011437
Match_columns 485
No_of_seqs 180 out of 1206
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 08:07:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011437.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011437hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kae_A HDH, histidinol dehydro 100.0 5E-165 2E-169 1274.3 41.0 421 51-476 6-430 (434)
2 4gic_A HDH, histidinol dehydro 100.0 7E-161 2E-165 1241.1 35.6 414 44-462 2-423 (423)
3 3my7_A Alcohol dehydrogenase/a 97.6 0.021 7.3E-07 59.3 25.3 284 130-439 69-446 (452)
4 4ghk_A Gamma-glutamyl phosphat 97.4 0.034 1.1E-06 57.8 24.4 329 73-439 47-436 (444)
5 3etf_A Putative succinate-semi 97.2 0.1 3.5E-06 54.2 24.9 320 72-439 49-458 (462)
6 4e4g_A Methylmalonate-semialde 97.1 0.15 5.1E-06 54.2 25.7 324 73-440 85-503 (521)
7 4dng_A Uncharacterized aldehyd 97.0 0.21 7.2E-06 52.3 25.1 323 72-439 64-475 (485)
8 3k9d_A LMO1179 protein, aldehy 97.0 0.46 1.6E-05 49.4 28.2 329 72-442 32-449 (464)
9 3k2w_A Betaine-aldehyde dehydr 96.9 0.3 1E-05 51.4 25.6 326 73-440 71-486 (497)
10 3ros_A NAD-dependent aldehyde 96.9 0.11 3.7E-06 54.7 21.7 323 72-440 46-456 (484)
11 3r31_A BADH, betaine aldehyde 96.9 0.52 1.8E-05 50.0 26.9 317 73-440 73-486 (517)
12 4h7n_A Aldehyde dehydrogenase; 96.8 0.32 1.1E-05 50.8 24.3 281 130-439 88-460 (474)
13 2w8n_A Succinate-semialdehyde 96.8 0.68 2.3E-05 48.6 28.8 322 72-439 68-483 (487)
14 3prl_A NADP-dependent glyceral 96.8 0.72 2.5E-05 48.8 29.0 326 72-439 69-480 (505)
15 1t90_A MMSDH, probable methylm 96.8 0.63 2.1E-05 48.8 26.2 322 72-440 63-478 (486)
16 3v4c_A Aldehyde dehydrogenase 96.7 0.29 9.9E-06 51.9 23.7 265 157-444 161-520 (528)
17 3ju8_A Succinylglutamic semial 96.7 0.57 2E-05 49.1 25.7 321 74-435 64-464 (490)
18 2ve5_A BADH, betaine aldehyde 96.7 0.27 9.1E-06 51.5 22.7 319 74-439 66-480 (490)
19 2j6l_A Aldehyde dehydrogenase 96.7 0.84 2.9E-05 48.1 30.6 319 72-439 79-496 (500)
20 1o04_A Aldehyde dehydrogenase, 96.7 0.66 2.3E-05 49.0 25.7 320 74-440 82-493 (500)
21 3ifg_A Succinate-semialdehyde 96.6 0.87 3E-05 47.8 29.8 326 73-439 71-481 (484)
22 1o20_A Gamma-glutamyl phosphat 96.5 0.48 1.6E-05 48.9 23.2 326 72-440 34-420 (427)
23 1vlu_A Gamma-glutamyl phosphat 96.5 0.38 1.3E-05 50.4 22.6 338 71-440 33-438 (468)
24 4f3x_A Putative aldehyde dehyd 96.5 0.82 2.8E-05 48.2 25.1 321 72-439 82-494 (498)
25 3jz4_A Succinate-semialdehyde 96.5 1.1 3.6E-05 47.0 30.0 320 74-439 69-478 (481)
26 3u4j_A NAD-dependent aldehyde 96.3 1.4 4.9E-05 46.8 29.5 321 73-440 84-496 (528)
27 1bxs_A Aldehyde dehydrogenase; 96.2 0.8 2.7E-05 48.3 23.1 320 74-440 83-494 (501)
28 3lns_A Benzaldehyde dehydrogen 96.2 0.54 1.8E-05 48.9 21.4 325 72-440 48-455 (457)
29 3r64_A NAD dependent benzaldeh 96.2 1.6 5.6E-05 46.0 25.0 321 75-439 73-482 (508)
30 1a4s_A ALDH, betaine aldehyde 96.1 1.7 5.8E-05 45.8 27.2 320 72-440 78-494 (503)
31 2imp_A Lactaldehyde dehydrogen 96.1 1.5 5E-05 45.9 24.0 318 74-440 66-477 (479)
32 2d4e_A 5-carboxymethyl-2-hydro 96.1 0.34 1.2E-05 51.3 19.3 318 74-439 86-502 (515)
33 3sza_A Aldehyde dehydrogenase, 96.0 1.1 3.7E-05 46.9 22.4 325 71-440 37-446 (469)
34 3ed6_A Betaine aldehyde dehydr 95.9 2.2 7.4E-05 45.3 31.0 321 72-439 92-507 (520)
35 3ek1_A Aldehyde dehydrogenase; 95.9 2.1 7.3E-05 45.2 30.0 319 75-439 93-499 (504)
36 3qan_A 1-pyrroline-5-carboxyla 95.8 2.4 8.3E-05 45.1 28.6 328 72-440 94-514 (538)
37 3iwj_A Putative aminoaldehyde 95.8 1 3.5E-05 47.5 21.5 327 72-440 70-487 (503)
38 3haz_A Proline dehydrogenase; 95.8 0.59 2E-05 53.7 21.1 287 127-439 608-984 (1001)
39 2o2p_A Formyltetrahydrofolate 95.7 0.77 2.6E-05 48.7 20.0 321 72-439 96-514 (517)
40 3i44_A Aldehyde dehydrogenase; 95.5 2.4 8.1E-05 44.7 23.0 317 72-438 83-494 (497)
41 3pqa_A Lactaldehyde dehydrogen 95.4 3.3 0.00011 43.5 25.3 327 73-443 55-465 (486)
42 1ez0_A ALDH, aldehyde dehydrog 95.1 0.63 2.1E-05 49.1 17.1 261 159-442 130-483 (510)
43 4f9i_A Proline dehydrogenase/d 94.9 3 0.0001 48.1 23.1 263 154-440 655-1008(1026)
44 1uzb_A 1-pyrroline-5-carboxyla 94.9 4.7 0.00016 42.5 25.2 325 72-439 94-513 (516)
45 2wme_A BADH, betaine aldehyde 94.8 4.2 0.00014 42.9 22.2 319 74-438 66-479 (490)
46 3b4w_A Aldehyde dehydrogenase; 94.7 5.2 0.00018 42.1 28.3 321 72-440 68-480 (495)
47 1uxt_A Glyceraldehyde-3-phosph 94.6 5.5 0.00019 41.9 26.1 325 74-440 77-490 (501)
48 3ty7_A Putative aldehyde dehyd 94.2 6.3 0.00021 41.0 26.3 317 73-439 66-474 (478)
49 1wnd_A Putative betaine aldehy 93.8 7.7 0.00026 40.8 27.4 321 72-439 80-492 (495)
50 3rh9_A Succinate-semialdehyde 93.4 9.1 0.00031 40.4 28.9 326 72-445 69-487 (506)
51 1euh_A NADP dependent non phos 93.4 8.5 0.00029 40.0 27.4 324 73-439 61-471 (475)
52 2h5g_A Delta 1-pyrroline-5-car 80.6 3.3 0.00011 43.3 7.6 329 73-440 50-433 (463)
53 2y53_A Aldehyde dehydrogenase 65.8 8.4 0.00029 40.8 6.3 87 352-441 410-518 (534)
54 4e3x_A Delta-1-pyrroline-5-car 59.1 15 0.00051 39.4 6.8 287 125-440 165-549 (563)
55 3qfu_A 78 kDa glucose-regulate 49.5 25 0.00087 34.3 6.2 73 196-290 153-226 (394)
56 3i33_A Heat shock-related 70 k 38.4 43 0.0015 32.9 5.9 74 196-288 158-232 (404)
57 4gni_A Putative heat shock pro 34.9 49 0.0017 32.8 5.7 73 196-288 150-223 (409)
58 1dkg_D Molecular chaperone DNA 30.1 77 0.0026 30.9 6.1 74 196-291 135-209 (383)
59 1jce_A ROD shape-determining p 25.3 1.3E+02 0.0046 28.7 6.8 72 195-290 94-167 (344)
60 2kho_A Heat shock protein 70; 21.5 1.1E+02 0.0036 32.8 5.7 48 196-244 135-183 (605)
61 3ohs_X Trans-1,2-dihydrobenzen 20.8 3.8E+02 0.013 25.5 9.1 97 251-378 7-122 (334)
62 1vr0_A Probable 2-phosphosulfo 20.0 48 0.0016 32.2 2.4 69 343-420 45-118 (247)
No 1
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=100.00 E-value=4.7e-165 Score=1274.31 Aligned_cols=421 Identities=48% Similarity=0.769 Sum_probs=402.8
Q ss_pred EEEcCCCCHHHHHHHhcCCCC-CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHH
Q 011437 51 SYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVK 127 (485)
Q Consensus 51 ~~~~~~~~~~~~~~~l~R~~~-~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A--~l~~~~~ 127 (485)
+++|...+...+..++.|+.. +..++.+.|++||++||++||+||++||+|||++++++|+||++||++| ++|++++
T Consensus 6 ~~~~~~~~~~~~~~l~~r~~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~~~~~~~ 85 (434)
T 1kae_A 6 IIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELK 85 (434)
T ss_dssp EEEGGGSCHHHHHHHTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCCHHHHHHHHHHSCHHHH
T ss_pred hhccccCCHHHHHHHhcCcccccHHHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccCHHHHHHHHHhCCHHHH
Confidence 456776777777777777655 5578999999999999999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCC
Q 011437 128 EAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQ 207 (485)
Q Consensus 128 ~Ai~~A~~nI~~Fh~~Q~~~~~~~~~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~ 207 (485)
+||+.|++||++||++|+|++|.+++.+|++|||+|+||+|||||||||+|+|||||||++||||||||++|||||||
T Consensus 86 ~ai~~A~~nI~~fH~~Q~~~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp-- 163 (434)
T 1kae_A 86 QAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPP-- 163 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECS--
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCC--
Confidence 999999999999999999999888888899999999999999999999999999999999999999999999999999
Q ss_pred CCCchH-HHHHHHHcCCcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEE
Q 011437 208 DGSICK-VLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLV 286 (485)
Q Consensus 208 ~G~i~p-iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~VgID~~AGPSEvlI 286 (485)
++|| +|+||++|||+|||++|||||||||||||||||||||||||||+|||+|||+|+++.|.|||||+||||||+|
T Consensus 164 --~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~VgIDm~AGPSEilV 241 (434)
T 1kae_A 164 --PIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLV 241 (434)
T ss_dssp --SCCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSCEESCCCCCCEEEE
T ss_pred --CCCHHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCccccCCCCCCceEEE
Confidence 4999 9999999999999999999999999999999999999999999999999998821123599999999999999
Q ss_pred EecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEeCCHHHHHHHh
Q 011437 287 IADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEGISFS 366 (485)
Q Consensus 287 IAD~sAnP~~vAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v~sl~eai~~~ 366 (485)
|||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.|||++|+++||+++.+|+|+|++||++++
T Consensus 242 iAD~tAnp~~vAaDLLsQAEHd~~a~aiLvT~s~~la-~~V~~ev~~ql~~lpr~~ia~~sl~~~~ii~v~~l~ea~~~~ 320 (434)
T 1kae_A 242 IADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMA-RRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEIS 320 (434)
T ss_dssp EECTTSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHHTTCTTHHHHHHHHTTCEEEECSSHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHcCeEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999996 999999999999999999999999855999999999999999
Q ss_pred hhhccccccccccChHhHHhhccccceeccCCCCCccccccccCCCCCCCCCCccccccCCcccccceeeeEEEeCHHHH
Q 011437 367 NLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGL 446 (485)
Q Consensus 367 N~~APEHLel~~~~p~~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~FlK~~s~~~~s~~~l 446 (485)
|+||||||||+++||++|+++|+||||||||+||||++|||++||||||||+|+|||+|||||+||||++|+|+||++++
T Consensus 321 N~~APEHLel~~~dp~~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s~~~l 400 (434)
T 1kae_A 321 NQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEGF 400 (434)
T ss_dssp HHHCCSEEEEESTTHHHHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCSCGGGGEEEEEEEEECHHHH
T ss_pred HHhhhHhhhhhhcCHHHHHhhcCcccchhcCCCCchhhcccccCCCcccCCCCceeccCCCcHHhccceeeEEEECHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHhhCCHHHHHHHHHHHHhh
Q 011437 447 KKLGPYVATMAEIEGLEAHKRAVTFRLQDI 476 (485)
Q Consensus 447 ~~l~~~~~~LA~~EGL~aHa~sv~~R~~~~ 476 (485)
+++++++.+||++|||++|++|+++|+++.
T Consensus 401 ~~l~~~~~~lA~~EGL~aHa~av~~R~~~~ 430 (434)
T 1kae_A 401 SALASTIETLAAAERLTAHKNAVTLRVNAL 430 (434)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 999999999999999999999999999764
No 2
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=100.00 E-value=7.1e-161 Score=1241.07 Aligned_cols=414 Identities=35% Similarity=0.529 Sum_probs=361.4
Q ss_pred ccceeEEEEEcCCCCHH-HHHHHhcCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCC---ceeeCCCCCCC
Q 011437 44 RIQCSMKSYRLSELTHA-EVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE---KVVENVSELPD 119 (485)
Q Consensus 44 ~~~~~m~~~~~~~~~~~-~~~~~l~R~~~~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~---~l~V~~~e~~~ 119 (485)
|..+.|++++..+.+.. ++.+++.|+..+++++.+.|++||++||++||+||++||+|||+++++ .|+||++||++
T Consensus 2 M~~~~ik~L~~~~~~f~~~l~~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~ 81 (423)
T 4gic_A 2 MTEVKIKRLYTGDADFASQLDRLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEA 81 (423)
T ss_dssp CSCCCCEEEETTCTTHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHH
T ss_pred CCcceeEEecCCCCCHHHHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHH
Confidence 67788999988777644 577888898888899999999999999999999999999999999764 59999999999
Q ss_pred C--CCCHHHHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCC
Q 011437 120 P--ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCK 197 (485)
Q Consensus 120 A--~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~~~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~ 197 (485)
| .+|+++++||+.|++||++||++|++++|.+++.+|+++||+|+||+|||||||||+|+|||||||++||||||||+
T Consensus 82 A~~~l~~~~~~ai~~A~~~I~~fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~ 161 (423)
T 4gic_A 82 AWQALPAEQAKALREAAERIRAYAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVP 161 (423)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCS
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCC
Confidence 8 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCCCCchH-HHHHHHHcCCcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccccc
Q 011437 198 TVVLATPPSQDGSICK-VLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISID 276 (485)
Q Consensus 198 ~Ivv~TPP~~~G~i~p-iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~VgID 276 (485)
+||||||| ++|++|| +|+||++|||++||++|||||||||||||||||||||||||||+||++|||+|++ .||||
T Consensus 162 ~Iv~~tPp-~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g---~VgID 237 (423)
T 4gic_A 162 ELIMAVPA-PRGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG---QVGID 237 (423)
T ss_dssp EEEEECCC-GGGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT---TBEEC
T ss_pred eEEEecCC-CCCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC---CcCcc
Confidence 99999999 6899999 9999999999999999999999999999999999999999999999999998876 49999
Q ss_pred CCCCCcEEEEEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhc-CCeEEE
Q 011437 277 MPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVF 355 (485)
Q Consensus 277 ~~AGPSEvlIIAD~sAnP~~vAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~-~g~ii~ 355 (485)
|+||||||+||||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.|||++|+++||+ +|.+|+
T Consensus 238 m~AGPSEilViAD~~a~p~~vAaDLlsQAEHd~~a~~iLvT~s~~la-~~V~~~i~~~l~~l~r~~i~~~sl~~~g~ii~ 316 (423)
T 4gic_A 238 MVAGPSEILVISDGRTDPDWIAMDLFSQAEHDEDAQAILISPDAAHL-EAVQASIERLLPGMERAEVIRTSLERRGGMIL 316 (423)
T ss_dssp CCCCCCEEEEEECSCSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHGGGCTTHHHHHHHHHHHCEEEE
T ss_pred cccccceEEEEeCCCCCHHHHHHHHHHhhccCCCCeEEEEeCcHHHH-HHHHHHHHHHHhhCccHHHHHHHHhcCceEEE
Confidence 99999999999999999999999999999999999999999999996 9999999999999999999999998 699999
Q ss_pred eCCHHHHHHHhhhhccccccccccChHhHHhhccccceeccCCCCCccccccccCCCCCCCCCCccccccCCccccccee
Q 011437 356 ARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKY 435 (485)
Q Consensus 356 v~sl~eai~~~N~~APEHLel~~~~p~~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~FlK~ 435 (485)
|+|++||++++|+||||||||+++||++|+++|+||||||||+||||++|||++||||||||+|+|||+|||||+||||+
T Consensus 317 v~~~~ea~~~~N~~APEHLel~~~~~~~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~ 396 (423)
T 4gic_A 317 VDDLEQAAAVANRIAPEHLELSVESPEVLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKR 396 (423)
T ss_dssp CSSHHHHHHHHHHHCCSEEEEESSCHHHHGGGCCCCSEEEEC----------------CCCCTTGGGTCCCCCGGGGEEE
T ss_pred EeehHHHHHHHHhhChHHhhhhhCCHHHHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEeCHHHHHhhhHHHHHHHHhhCC
Q 011437 436 MTVQSLTEEGLKKLGPYVATMAEIEGL 462 (485)
Q Consensus 436 ~s~~~~s~~~l~~l~~~~~~LA~~EGL 462 (485)
+|+|++|++|++++++++.+||++|||
T Consensus 397 ~s~~~~s~~~l~~l~~~~~~lA~~EgL 423 (423)
T 4gic_A 397 SSLIYCSPDGADQLGRTASLLAWGEGL 423 (423)
T ss_dssp EEEEC----------------------
T ss_pred eeEEEECHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999998
No 3
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=97.59 E-value=0.021 Score=59.33 Aligned_cols=284 Identities=17% Similarity=0.164 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCC
Q 011437 130 FDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQD 208 (485)
Q Consensus 130 i~~A~~nI~~Fh~~Q~~~~~~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~ 208 (485)
+..+.+.++++.+.++.... +...++...-.++.|+.-|++.+|.- || ++++..++||-.+|+. |++-|..
T Consensus 69 ~~~a~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N---~P~~~~~~k~~~ALaaGN~--VVlKps~-- 140 (452)
T 3my7_A 69 NHFASEFIYNKYKDEQTCGI-LEEDDNLGTMTIAEPVGIICGIVPTT---NPTSTAIFKSLISLKTRNG--IIFSPHP-- 140 (452)
T ss_dssp HHHHHHHHHHHHTTCCCSEE-C-------CEEEEEECCEEEEEECTT---STTHHHHHHHHHHHHTTCE--EEEEECG--
T ss_pred HHHHHHHHHHHhhhcccccc-ccCCCCCceEEEecCceEEEEEcCCC---ChHHHHHHHHHHHHhcCCe--EEEEcCC--
Confidence 45677777666554433211 12223333456789999999999963 45 4666778899999964 4444432
Q ss_pred CCchH--HHHH-------HHHcCCcc-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccc
Q 011437 209 GSICK--VLYC-------AKKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISI 275 (485)
Q Consensus 209 G~i~p--iLaA-------A~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~VgI 275 (485)
..| .+.. +..+|+.+ ++. -| |...-.+|.= -|.||+|.=-|..=+. |..... +.--+
T Consensus 141 --~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~----~p~v~~V~fTGs~~~~--~~a~~~--~kp~~ 210 (452)
T 3my7_A 141 --RAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMK----HDDIALILATGGPGMV--KAAYSS--GKPAI 210 (452)
T ss_dssp --GGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHH----CTTCCEEEECSCHHHH--HHHHTS--SSCEE
T ss_pred --CchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHh----CCCccEEEEECcHHHH--HHHHhc--CCCEE
Confidence 233 2222 33577753 332 24 6666666652 5789999876665443 222211 11112
Q ss_pred cCCCCCcEEEEEecCCCCHHHHHHhhhhccCcCCC----Cc-eEEEecCchhhHHHHHHHHHH----------------H
Q 011437 276 DMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPD----SQ-VVLVIVGDGVDLDAIEQEISK----------------Q 334 (485)
Q Consensus 276 D~~AGPSEvlIIAD~sAnP~~vAaDLLaQAEHdp~----a~-aiLvT~s~~la~~~V~~ei~~----------------q 334 (485)
.-|+.---+|-|++||.+..|.+++.-+=++.. |. .++|-. ++. +++.+++.+ .
T Consensus 211 --~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~--~i~-d~f~~~l~~~~gpli~~~~~~~v~~~ 285 (452)
T 3my7_A 211 --GVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVD--EVY-DEVKERFASHKAHVLSKTDADKVRKV 285 (452)
T ss_dssp --ECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEG--GGH-HHHHHHHHTTTEEECCHHHHHHHHHH
T ss_pred --ecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcH--HHH-HHHHHHHHHhCCCcCCHHHHHHHHHH
Confidence 233334456678889999999998876655542 22 344433 343 555554443 2
Q ss_pred HhcCC----------CHHHHHH------------------------hh--c-CC---eEEEeCCHHHHHHHhhhh-----
Q 011437 335 CQSLP----------RGEFASK------------------------AL--G-HS---FMVFARDMLEGISFSNLY----- 369 (485)
Q Consensus 335 l~~l~----------r~~ia~~------------------------sl--~-~g---~ii~v~sl~eai~~~N~~----- 369 (485)
+.... +..++.. .+ + .| .++.++|+|||++++|..
T Consensus 286 i~~~~~~~a~v~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~E~FgPVl~v~~~~~~~eAi~~an~~~~~~g 365 (452)
T 3my7_A 286 LLIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGG 365 (452)
T ss_dssp HEETTEECGGGTTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGSCCSSSEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred HHhhcccCCeEecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhcCccCcEEEEEEeCCHHHHHHHHHhcccccC
Confidence 22110 0111110 01 1 13 345689999999999997
Q ss_pred ccccccccccChH---h---HHhhccccceeccCCCCCccccccccCCCCCCC------CCCcc--ccccCCccccccee
Q 011437 370 APEHLIVNVKDAE---K---WESIIENAGSVFLGEWTPESVGDYASGTNHVLP------TYGYA--RMYGGVSLDSFLKY 435 (485)
Q Consensus 370 APEHLel~~~~p~---~---~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLP------T~G~A--R~~sgLsV~~FlK~ 435 (485)
.+--..|+++|.. . +..+++ +|.|++.. |.++|-+-...|+.|| ++.+. -.+..+++.++|..
T Consensus 366 ~Glta~i~t~d~~~a~~i~~~a~~l~-~G~V~VN~--~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~ 442 (452)
T 3my7_A 366 IGHTSGLYTNQDVNADRIRYFGDKMK-TARILINI--PTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINK 442 (452)
T ss_dssp SCCEEEEESCTTTCHHHHHHHHHHCC-CSEEEESC--CCC----------------------------CCCCCGGGGEEE
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHhCC-EEEEEECC--CCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeee
Confidence 4566889998843 4 667775 99999997 4555544444454443 33332 33556889999866
Q ss_pred eeEE
Q 011437 436 MTVQ 439 (485)
Q Consensus 436 ~s~~ 439 (485)
.++-
T Consensus 443 ~~v~ 446 (452)
T 3my7_A 443 KTVA 446 (452)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5554
No 4
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=97.44 E-value=0.034 Score=57.79 Aligned_cols=329 Identities=13% Similarity=0.124 Sum_probs=180.9
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 152 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~~ 152 (485)
..+-.+..+++.+.++++.|+=....++.+.+-.... +++...++..+. ..-++.+++.++.|...-.+......
T Consensus 47 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g--~~ea~~~~~~~~---~~~v~~~~~~l~~~a~~~~~~g~~~~ 121 (444)
T 4ghk_A 47 TAAKNAALEAVARAIERDAGALKAANARDVARAKDKG--LDAAFVDRLTLS---DKALKTMVEGLRQVATLPDPIGEMSN 121 (444)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC--------CCSHHHHHCCC---TTHHHHHHHHHHHHHHSCCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhcc--chHHHHHHhhcc---HHHHHHHHHHHHHHHhhccccCccCC
Confidence 3444556677777777777766555566554321000 111110000000 01366777778877654333221121
Q ss_pred ---ecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH----HHHHH-----HH
Q 011437 153 ---NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK----VLYCA-----KK 220 (485)
Q Consensus 153 ---~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p----iLaAA-----~l 220 (485)
..+|...-.++.|+.-|++..|. . |...++-.+||-.||+. ||+-|.. ..| .|+-. ..
T Consensus 122 ~~~~~~~~~~~~~~~P~GVV~~I~p~---n-P~~~~~~~~~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~~~l~~ 191 (444)
T 4ghk_A 122 LKYRPSGIQVGQMRVPLGVIGIIYES---R-PNVTIDAAALCLKSGNA--TILRGGS----EALESNTALAKLIGEGLAE 191 (444)
T ss_dssp EEECTTSCEEEEEEEECSEEEEECCS---C-HHHHHHHHHHHHHTTCE--EEEECCG----GGHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCccceEEEeccEEEEEEeCC---C-cHHHHHHHHHHHHcCCE--EEEECCc----cchHHHHHHHHHHHHHHHH
Confidence 13466677789999999999996 2 56777888999999974 4444542 344 22222 45
Q ss_pred cCCcc-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhc--CCCCcccccCCCCCcEEEEEecCCCCH
Q 011437 221 AGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQ--NSEAMISIDMPAGPSEVLVIADIYASP 294 (485)
Q Consensus 221 ~Gv~e-Iy~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~--~~~g~VgID~~AGPSEvlIIAD~sAnP 294 (485)
+|+.+ ++.+ | |...++++- ..-|+||+|.=-|..=|- |++.. .. .| +=-+-|=|= +|-|++||.
T Consensus 192 aGlP~gvv~vv~g~~~~~~~~~L---~~~p~vd~V~fTGs~~vg--~~v~~~a~~--pv-~lELGGk~p--~IV~~dADl 261 (444)
T 4ghk_A 192 AGLPQDTVQVVETADRAAVGRLI---TMTEYVDVIVPRGGKSLI--ERLINEARV--PM-IKHLDGICH--VYVDDRASV 261 (444)
T ss_dssp TTCCGGGEEECCCCCTHHHHHHT---TCTTTCSEEEECSCHHHH--HHHHHHCCS--CB-CCCCCCCCE--EEECTTCCH
T ss_pred cCCCcccEEEEeCCCHHHHHHHH---hcCCCccEEEEECcHHHH--HHHHHhCCC--CE-EEEcCCcCe--EEECCCCCH
Confidence 67643 4332 3 554444432 134889999888875432 22211 00 01 111234343 344667999
Q ss_pred HHHHHhhhhccCcCC---CCce-EEEecCchhhHHHHHHHHHHHHhcCCC--------HHHHHHh------------hc-
Q 011437 295 VHIAADLLSQAEHGP---DSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR--------GEFASKA------------LG- 349 (485)
Q Consensus 295 ~~vAaDLLaQAEHdp---~a~a-iLvT~s~~la~~~V~~ei~~ql~~l~r--------~~ia~~s------------l~- 349 (485)
+..|..++.-+=... .|.. +||- +++. +++.+.+.+.++.+.- ...++.+ +.
T Consensus 262 ~~Aa~~i~~~~~~n~G~C~a~~rvlV~--~~i~-d~f~~~l~~~~~~~~~~~~g~p~~~~~i~~a~~G~~~~~~~~~~~e 338 (444)
T 4ghk_A 262 TKALTVCDNAKTHRYGTCNTMETLLVA--RGIA-PAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRT 338 (444)
T ss_dssp HHHHHHCC---------CCCCCEEEEE--GGGH-HHHHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCCEECCSGGGTC
T ss_pred HHHHHHHHHHhcCCCcccCcCceEEEe--HHHH-HHHHHHHHHHHHHcCCeecCCHHHHHHHHhcccCcccCCCchhhhc
Confidence 988877764432222 2222 3443 2343 7777777777665532 2344444 21
Q ss_pred --CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhccccceeccCCCCCccccccccCCCCCCCCCCc
Q 011437 350 --HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGY 420 (485)
Q Consensus 350 --~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G~ 420 (485)
.| .|+.++|+|||++++|..--=| ..|.++|.. .+..++ .+|.|++..++.. +.-+|-+|.
T Consensus 339 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l-~aG~V~vN~~~~~---------~~~~pfGg~ 408 (444)
T 4ghk_A 339 EYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREV-DSASVMVNASTRF---------ADGFEFGLG 408 (444)
T ss_dssp C---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHC-CSSEEEEEECGGG---------CSTTTTTCS
T ss_pred cccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhC-CcceEEEcCCCcc---------CCCCCcCCc
Confidence 14 3566899999999999863322 566777764 566666 4999999986541 123565554
Q ss_pred c---------ccccCCcccccceeeeEE
Q 011437 421 A---------RMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 421 A---------R~~sgLsV~~FlK~~s~~ 439 (485)
. |+.|..+++.|+..-++.
T Consensus 409 ~~sG~g~~~~~~~G~~gl~~~t~~K~v~ 436 (444)
T 4ghk_A 409 AEIGISNDKLHARGPVGLEGLTSLKYVV 436 (444)
T ss_dssp CCSEEECCSSSCCEEECGGGGEEEEEEE
T ss_pred ccccccCCcccCCChhHHHhhceEEEEE
Confidence 3 344667888888776653
No 5
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=97.21 E-value=0.1 Score=54.19 Aligned_cols=320 Identities=13% Similarity=0.156 Sum_probs=177.6
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc--CCCc
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK--SAET 149 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~--~~~~ 149 (485)
...+-.+..+++-+.++++.|+=..-.++...+- -.+.+.-+..+++.++.|.+... ....
T Consensus 49 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 111 (462)
T 3etf_A 49 SVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP-----------------IKQARAEVTKSAALCDWYAEHGPAMLNPE 111 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHhHHHhcCCc
Confidence 3444556677777777777776655555555421 01222224444555554433211 1111
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-
Q 011437 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH- 225 (485)
Q Consensus 150 ~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e- 225 (485)
....+|...-.++.|+.-|++..|.- || ...+...+||-.||+.=| +-|.. .-.... +......+|+.+
T Consensus 112 -~~~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~Vv--lKps~-~tp~~~~~l~~~l~~aglP~g 184 (462)
T 3etf_A 112 -PTLVENQQAVIEYRPLGVILAIMPWN---FPLWQVLRGAVPILLAGNSYL--LKHAP-NVTGCAQMIARILAEAGTPAG 184 (462)
T ss_dssp -ECSSGGGCEEEEEEECSEEEEECCSS---STTHHHHHHHHHHHHTTCEEE--EECCT-TCHHHHHHHHHHHHHTTCCBT
T ss_pred -ccCCCCceeEEEeecCcEEEEECCCc---hHHHHHHHHHHHHHhcCCEEE--EECCC-CCcHHHHHHHHHHHHhCCCcC
Confidence 11224555667889999999999963 44 344456889999998533 44432 111122 334455667653
Q ss_pred hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHHHH------HHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 226 ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTA------AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 226 Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~------AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
++. -|+.....+|. +-|+||+|.=-|..=|-. |+.+- .|...+ -|-+= +|-|++||.+..
T Consensus 185 v~~vv~g~~~~~~~l~----~~~~v~~v~fTGS~~~g~~i~~~aa~~~~-----~v~lEl-GGk~p--~iV~~dADl~~A 252 (462)
T 3etf_A 185 VYGWVNANNEGVSQMI----NDPRIAAVTVTGSVRAGAAIGAQAGAALK-----KCVLEL-GGSDP--FIVLNDADLELA 252 (462)
T ss_dssp TEEECCCCHHHHHHHH----TSTTEEEEEEESCHHHHHHHHHHHHHTTC-----CEEEEC-CCCEE--EEECTTSCHHHH
T ss_pred eEEEEECCHHHHHHHh----cCCCCCEEEEeCCchHHHHHHHHHhccCC-----ceEEEc-CCCCc--cEECCCCCHHHH
Confidence 221 35555666665 258899997766654422 22110 122221 15443 444677999987
Q ss_pred HHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC-
Q 011437 298 AADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH- 350 (485)
Q Consensus 298 AaDLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~- 350 (485)
|..++.-+=. .-.|...++.. +++. ++..+.+.+.++.+.- .+.++.+.+.
T Consensus 253 a~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 330 (462)
T 3etf_A 253 VKAAVAGRYQNTGQVCAAAKRFIVE-EGIA-QAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEG 330 (462)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCcccCCcEEEEe-hhHH-HHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCC
Confidence 7776643322 22344444443 3343 6666666666654420 1222222211
Q ss_pred -------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHh
Q 011437 351 -------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWES 386 (485)
Q Consensus 351 -------------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~ 386 (485)
| .++.++|+|||++++|..--=| ..|.++|.. .++.
T Consensus 331 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~ 410 (462)
T 3etf_A 331 ARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAA 410 (462)
T ss_dssp CEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHH
T ss_pred CEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 2 2355789999999999864333 567788864 5667
Q ss_pred hccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEE
Q 011437 387 IIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 387 ~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~FlK~~s~~ 439 (485)
+++ +|.|++..+.. .+.-+|-+| ..|..+..+++.|+..-++.
T Consensus 411 ~l~-aG~v~vN~~~~---------~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~ 458 (462)
T 3etf_A 411 RLE-CGGVFINGYSA---------SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458 (462)
T ss_dssp HCC-SSEEEESSCCC---------CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred hCC-cceEEECCCCC---------CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEE
Confidence 775 99999997642 123455544 45666666778887766553
No 6
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=97.14 E-value=0.15 Score=54.20 Aligned_cols=324 Identities=15% Similarity=0.107 Sum_probs=182.1
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--cCCCce
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ--KSAETS 150 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q--~~~~~~ 150 (485)
..+-.+..+++-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|.... +...+.
T Consensus 85 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~ 147 (521)
T 4e4g_A 85 PQRRARVFMKFVQLLNDNMNELAEMLSREHGKT-----------------IDDAKGDIVRGLEVCEFVIGIPHLQKSEFT 147 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC-----------------HHHHHHHHHHHHHHHHHHHTHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 344455566677777777776555555554421 0111223566677776665421 111222
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hh
Q 011437 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-IL 227 (485)
Q Consensus 151 ~~~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy 227 (485)
....+|...-.++.|+.-|++..|.- +|+ ...+.-.+||-.||+. ||+-|.. .-.... +......+|+.+ ++
T Consensus 148 ~~~~~~~~~~~~~~P~GVV~~I~PwN-~P~-~~~~~~~a~ALaaGN~--VVlKpse-~tp~t~~~l~~l~~eaGlP~gvv 222 (521)
T 4e4g_A 148 EGAGPGIDMYSIRQPVGIGAGITPFN-FPG-MIPMWMFAPAIACGNA--FILKPSE-RDPSVPIRLAELMIEAGLPAGIL 222 (521)
T ss_dssp EEEETTEEEEEEEEECCEEEEECCSS-CTT-HHHHHHHHHHHHTTCE--EEEECCT-TSTHHHHHHHHHHHHTTCCTTSE
T ss_pred ccCCCCcceeEEEcCCcEEEEECCCc-chH-HHHHHHHHHHHHcCCE--EEEECCC-cchHHHHHHHHHHHHhCCCcCeE
Confidence 22345777778899999999999963 333 2445577899999975 3444432 111222 334455667652 22
Q ss_pred h--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHH
Q 011437 228 K--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 299 (485)
Q Consensus 228 ~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vAa 299 (485)
. -|+.....+|. .-|.||+|.=-|..=| ++|+.+. .|-- -+-|-|= +|-|++||.+..|.
T Consensus 223 ~vv~g~~~~~~~L~----~~p~vd~I~FTGS~~vG~~i~~~aa~~lk-----pv~l-ELGGk~p--~IV~~dADl~~Aa~ 290 (521)
T 4e4g_A 223 NVVNGDKGAVDAIL----THPDIAAVSFVGSTPIARYVYGTAAMNGK-----RAQC-FGGAKNH--MIIMPDADLDQAAN 290 (521)
T ss_dssp EECCCCHHHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHHTTC-----EEEE-ECCCCEE--EEECTTSCHHHHHH
T ss_pred EEEeCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHhhcCC-----Ceee-cCCCCCe--EEEcCCCCHHHHHH
Confidence 2 25555556665 2588999987776433 2232221 0111 1233333 44466799998777
Q ss_pred hhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC---
Q 011437 300 DLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH--- 350 (485)
Q Consensus 300 DLLaQA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~--- 350 (485)
.++.-+ =.--.|...++....++. ++..+.+.+.++.+.- .+.++.+.+.
T Consensus 291 ~i~~~~f~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~ 369 (521)
T 4e4g_A 291 ALIGAGYGSAGERCMAISVAVPVGEETA-NRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAK 369 (521)
T ss_dssp HHHHHHHGGGGCCTTSEEEEEEBSHHHH-HHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHhCCCCCcccCeEEEEeCchHH-HHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 665322 222344455555444354 7777777777766531 1122222211
Q ss_pred ---------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hH
Q 011437 351 ---------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KW 384 (485)
Q Consensus 351 ---------------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~ 384 (485)
| .|+-++|+|||++++|..--=| ..|.++|.. .+
T Consensus 370 v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~ 449 (521)
T 4e4g_A 370 LVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDF 449 (521)
T ss_dssp EEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHH
T ss_pred EEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHH
Confidence 1 1233689999999999843222 456777764 56
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCC-----CCcc--ccccCCcccccceeeeEEE
Q 011437 385 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYA--RMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 385 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~A--R~~sgLsV~~FlK~~s~~~ 440 (485)
+.++ .+|.|++..++.. .+..+|= +|+. |..|..+++.|+..-++..
T Consensus 450 ~~~l-~aG~V~vN~~~~~--------~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~ 503 (521)
T 4e4g_A 450 ASRI-NIGMVGVNVPIPV--------PLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503 (521)
T ss_dssp HHHC-CCSEEEESCSSCC--------CCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEE
T ss_pred HHhC-CeeeEEECCCCCC--------CCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEE
Confidence 6676 5999999976432 1233554 4455 5566678889988776553
No 7
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=97.02 E-value=0.21 Score=52.27 Aligned_cols=323 Identities=13% Similarity=0.083 Sum_probs=173.8
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~-~~~ 150 (485)
...+-.+..+++.+.++++.|+=..-.++...+- + .+.+.-+..+++.++.|.+...+- ...
T Consensus 64 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 126 (485)
T 4dng_A 64 TTEDRKAVLQKARGYLHENRDDIIMMIARETGGT----------------I-IKSTIELEQTIAILDEAMTYTGELGGVK 126 (485)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHHHGGGCSCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4445566677777778888776655555554420 0 122223666777777666543221 111
Q ss_pred E--EecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH-H-----HHHHHHc
Q 011437 151 V--ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-V-----LYCAKKA 221 (485)
Q Consensus 151 ~--~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-i-----LaAA~l~ 221 (485)
. ...+|...-.++.|+.-|++..|. -|| ...+...+||-.||+.=| +-|.. ..| + ..+...+
T Consensus 127 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~----~tp~~~~~~l~~~l~~a 197 (485)
T 4dng_A 127 EVPSDIEGKTNKIYRLPLGVISSISPF---NFPMNLSMRSIAPAIALGNSVV--HKPDI----QTAISGGTIIAKAFEHA 197 (485)
T ss_dssp CCCCSSTTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHTHHHHHHHHHT
T ss_pred ccccCCCCceEEEEEecceEEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EECCC----cChHHHHHHHHHHHHHh
Confidence 1 113567778889999999999996 355 445567889999997443 44432 344 2 2345566
Q ss_pred CCcc-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCC
Q 011437 222 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIY 291 (485)
Q Consensus 222 Gv~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~s 291 (485)
|+.+ ++. -| |...-.+|.= -|.||+|.=-|..=| .+|+.+-- |-.. +-|-+= +|-|++
T Consensus 198 GlP~gvv~vv~g~~~~~~~~L~~----~p~v~~v~fTGS~~~g~~i~~~aa~~~~~-----v~lE-lGGk~p--~iV~~d 265 (485)
T 4dng_A 198 GLPAGVLNVMLTDVKEIGDGMLT----NPIPRLISFTGSTAVGRHIGEIAGRAFKR-----MALE-LGGNNP--FAVLSD 265 (485)
T ss_dssp TCCTTSEEECCCCHHHHTTHHHH----CSSCSEEEEEECHHHHHHHHHHHHHHTCE-----EEEE-ECCCEE--EEECTT
T ss_pred CcCCCeEEEEeCCChhHHHHHHh----CCCCCEEEEECCcHHHHHHHHHHhhhccc-----hhhh-cCCCCc--eEEcCC
Confidence 6542 222 24 4334344432 478999975555433 22332210 1111 114443 444677
Q ss_pred CCHHHHHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHH
Q 011437 292 ASPVHIAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFAS 345 (485)
Q Consensus 292 AnP~~vAaDLLaQAEHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~ 345 (485)
||.+..|-.++.-+=... .|...++.. +++. +++.+.+.+.++.+. . .+.++
T Consensus 266 ADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~ 343 (485)
T 4dng_A 266 ADVDRAVDAAIFGKFIHQGQICMIINRIIVH-QDVY-DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIE 343 (485)
T ss_dssp SCHHHHHHHHHHHHTTCC----CCEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCccccCCEEEEe-HHHH-HHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHH
Confidence 999987777665442222 233333333 3453 777777776665541 0 12233
Q ss_pred HhhcC-----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---h
Q 011437 346 KALGH-----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---K 383 (485)
Q Consensus 346 ~sl~~-----------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~ 383 (485)
.+.+. | .++.++|+|||++++|..--=| ..|.++|.. .
T Consensus 344 ~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~ 423 (485)
T 4dng_A 344 QAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423 (485)
T ss_dssp HHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHH
T ss_pred HHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 32211 2 3456889999999999964333 557788864 5
Q ss_pred HHhhccccceeccCCCCCcccccc-ccCCCCCCCCCCccccccCCcccccceeeeEE
Q 011437 384 WESIIENAGSVFLGEWTPESVGDY-ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 384 ~l~~I~nAGsIFlG~~tp~a~GDY-~aGpNHvLPT~G~AR~~sgLsV~~FlK~~s~~ 439 (485)
+..++ .+|.|++..++....... +.| ...+|+.|+.+..+++.|++.-++.
T Consensus 424 ~~~~l-~~G~v~vN~~~~~~~~~~pfGG----~~~SG~G~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 424 FALQI-DSGMTHVNDQSVNDSPNIAFGG----NKASGVGRFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHTTS-CSSEEEESCC--------------------------CHHHHHHHEEEEEEE
T ss_pred HHHhc-CcceEEECCCCCCCCCCCCcCC----cCCCCCCccchHHHHHHhhceEEEE
Confidence 66666 589999998653211111 111 1355677887778888888776654
No 8
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=96.97 E-value=0.46 Score=49.45 Aligned_cols=329 Identities=16% Similarity=0.149 Sum_probs=190.4
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~ 151 (485)
..++..+.++.+-+.++++-|+=..--++....- .......-...+++++..+.+..+... .+
T Consensus 32 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~e~~~~~~~~~~~~~~~~~~~~~~~g-~~ 94 (464)
T 3k9d_A 32 SQQQIDTIVKAIADAGYGAREKLAKMAHEETGFG----------------IWQDKVIKNVFASKHVYNYIKDMKTIG-ML 94 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCS----------------CHHHHHHHHHHHHHHHHHHHTTCCCSE-EE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcC----------------HHHHHHHHHHHHHHHHHHhhhcccccc-ee
Confidence 3444555666666666666665444444443321 001111124566677777665443322 22
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HH-------HHHHHc
Q 011437 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VL-------YCAKKA 221 (485)
Q Consensus 152 ~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iL-------aAA~l~ 221 (485)
...+|...-.++.|+.-|++..|. -|| ++++..++||-.||+. |++-|.. ..| .+ .++..+
T Consensus 95 ~~~~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~--VVlKps~----~ap~t~~~l~~ll~~~~~~a 165 (464)
T 3k9d_A 95 KEDNEKKVMEVAVPLGVVAGLIPS---TNPTSTVIYKTLISIKAGNS--IVFSPHP----NALKAILETVRIISEAAEKA 165 (464)
T ss_dssp EEETTTTEEEEEEECCEEEEEECS---SSHHHHHHHHHHHHHHTTCE--EEEEECG----GGHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCceeEEEEecceEEEEECCC---cChHHHHHHHHHHHHHhCCe--EEEECCc----chHHHHHHHHHHHHHHHHHh
Confidence 233565667788999999999997 366 4556788999999964 4444532 334 22 234667
Q ss_pred CCcc-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhc-CCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011437 222 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQ-NSEAMISIDMPAGPSEVLVIADIYASPVH 296 (485)
Q Consensus 222 Gv~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~-~~~g~VgID~~AGPSEvlIIAD~sAnP~~ 296 (485)
|+.+ ++. -| |.+.-.+|.= -|.||+|.=-|..-|. |.... .. .| + -.|+.---+|-|++||.+.
T Consensus 166 G~P~gvv~vv~g~~~~~~~~L~~----~~~vd~I~fTGs~~v~--~~a~~~~k--pv-l--elG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 166 GCPKGAISCMTVPTIQGTDQLMK----HKDTAVILATGGSAMV--KAAYSSGT--PA-I--GVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp TCCTTSEEECSSCCHHHHHHHHH----CTTEEEEEECSCHHHH--HHHTTSSS--CE-E--EBCCCCCEEEECTTSCHHH
T ss_pred CCCCCeEEEEeCCCHHHHHHHHh----CCCCCEEEEeCChHHH--HHHHhcCC--cE-E--eeCCCCCeEEECCCCCHHH
Confidence 7764 332 24 6666666652 4789999877776543 22221 11 13 3 3444455567788999999
Q ss_pred HHHhhhhccCcCCC----C-ceEEEecCchhhHHHHHHHHHHHHhcC---------------C-----------CHHHHH
Q 011437 297 IAADLLSQAEHGPD----S-QVVLVIVGDGVDLDAIEQEISKQCQSL---------------P-----------RGEFAS 345 (485)
Q Consensus 297 vAaDLLaQAEHdp~----a-~aiLvT~s~~la~~~V~~ei~~ql~~l---------------~-----------r~~ia~ 345 (485)
.|-+++.-+=.+.. | +.+||- +++. +++.+++.++...+ + ..+-+.
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~--~~i~-d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~ 311 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVE--RVNK-EAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIA 311 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEE--HHHH-HHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEe--HHHH-HHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHH
Confidence 88888754433332 2 335553 3343 66666665543110 0 011111
Q ss_pred Hhh----cC-----------------------C---eEEEeCCHHHHH----HHhhhhcccc-ccccccChH---hHHhh
Q 011437 346 KAL----GH-----------------------S---FMVFARDMLEGI----SFSNLYAPEH-LIVNVKDAE---KWESI 387 (485)
Q Consensus 346 ~sl----~~-----------------------g---~ii~v~sl~eai----~~~N~~APEH-Lel~~~~p~---~~l~~ 387 (485)
+-+ .. | .++.++|+|||+ +++|..--=| ..|.++|.. .+..+
T Consensus 312 ~~~~~a~~~ga~vl~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~ 391 (464)
T 3k9d_A 312 NLAGLTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALK 391 (464)
T ss_dssp HHTTCCCCTTCCEEEEECCCCSTTCGGGSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHH
T ss_pred HHhhhhhcCCCEEEEcCCCCCCCCCcccccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHh
Confidence 111 11 2 245679999997 7888654334 677888865 46666
Q ss_pred ccccceeccCCCCCc-cccccccCCCCCCCCC----CccccccCCcccccceeeeEEEeC
Q 011437 388 IENAGSVFLGEWTPE-SVGDYASGTNHVLPTY----GYARMYGGVSLDSFLKYMTVQSLT 442 (485)
Q Consensus 388 I~nAGsIFlG~~tp~-a~GDY~aGpNHvLPT~----G~AR~~sgLsV~~FlK~~s~~~~s 442 (485)
++ +|.|++..++.- ..|+ ..+.+..||-+ |..++++.+++.+|+..-++.+-.
T Consensus 392 l~-~G~v~vN~~~~~~~~g~-~~~~~~~~~~G~G~~G~g~~~~~~~~~~~~~~k~v~~~~ 449 (464)
T 3k9d_A 392 KP-VSRLLVNTPGALGGIGA-TTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGV 449 (464)
T ss_dssp SS-EEEEEESSCHHHHHTTS-SSSSCCCSCBBCTGGGTCSCCSBCCGGGSEEEEEEEECC
T ss_pred CC-EeEEEEECCcccccccc-CCCCCccccccCcCCCCCcCCCCCCHHHheEEEEEEecC
Confidence 65 899999976542 3453 23344455554 666778888999999877776543
No 9
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=96.94 E-value=0.3 Score=51.40 Aligned_cols=326 Identities=16% Similarity=0.096 Sum_probs=180.9
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc-eE
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET-SV 151 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~-~~ 151 (485)
..+-.+..+++-+.++++.|+=..-.++...+- -.+.+.-+..+++.++.|.+.-..-.. ..
T Consensus 71 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~ 133 (497)
T 3k2w_A 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKL-----------------LSVAEMEVDVTATFIDYGCDNALTIEGDIL 133 (497)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHTTTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 344455566666667777665444444444321 112223366677777766543222111 11
Q ss_pred Ee-cCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc--
Q 011437 152 EN-MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-- 225 (485)
Q Consensus 152 ~~-~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-- 225 (485)
.. .+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+.=| +-|.. .-.... +......+|+..
T Consensus 134 ~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~ll~~aGlP~gv 207 (497)
T 3k2w_A 134 PSDNQDEKIYIHKVPRGVVVGITAW---NFPLALAGRKIGPALITGNTMV--LKPTQ-ETPLATTELGRIAKEAGLPDGV 207 (497)
T ss_dssp ECSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCS-SSCHHHHHHHHHHHHTTCCTTS
T ss_pred ccCCCCcceeEEEcCCceEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EECCC-CChHHHHHHHHHHHHhCcCcCe
Confidence 11 3566777889999999999997 477 555677889999997544 44432 212222 334456676542
Q ss_pred --hhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHH-HHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHhhh
Q 011437 226 --ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 302 (485)
Q Consensus 226 --Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AK-r~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vAaDLL 302 (485)
+..-.|...-.+|. .-|.||+|.=-|..=|-.+= +..+..--.|-.- +-|-|= +|-|++||.+..|..++
T Consensus 208 v~vv~g~~~~~g~~L~----~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lE-lGGk~p--~iV~~dADl~~Aa~~i~ 280 (497)
T 3k2w_A 208 LNVINGTGSVVGQTLC----ESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLE-LGGKAP--MVVMDDADLDKAAEDAL 280 (497)
T ss_dssp EEECCSCTTTHHHHHH----HCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEE-CCCCEE--EEECTTCCHHHHHHHHH
T ss_pred EEEEeCCchHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEE-cCCCCc--eEEcCCCCHHHHHHHHH
Confidence 22222544445554 25789999877764332210 0010000001111 124333 44466799998777765
Q ss_pred hccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh---------
Q 011437 303 SQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--------- 347 (485)
Q Consensus 303 aQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s--------- 347 (485)
.-+=. --.|...|+.... .. +++.+.+.+.++.+.- ...++.+
T Consensus 281 ~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~ 358 (497)
T 3k2w_A 281 WGRFANCGQVCTCVERLYVHAS-VY-DEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVAT 358 (497)
T ss_dssp HHHHGGGGCSTTSEEEEEEETT-TH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEE
T ss_pred HHHHhCCCCCCcCCcEEEEeHH-HH-HHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 32222 2234444444332 43 6777767666655521 0111111
Q ss_pred ------------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhh
Q 011437 348 ------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESI 387 (485)
Q Consensus 348 ------------------------------l~---~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~ 387 (485)
+. .| .|+.++|+|||++++|..--=| ..|.++|.. .++.+
T Consensus 359 gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 438 (497)
T 3k2w_A 359 GGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISD 438 (497)
T ss_dssp CCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHH
T ss_pred cCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHh
Confidence 11 13 3456899999999999864433 567777764 56677
Q ss_pred ccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEEE
Q 011437 388 IENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 388 I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
+ .+|.|++..++.. +.-+|-+ |..|..|..+++.|+..-++..
T Consensus 439 l-~aG~v~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~ 486 (497)
T 3k2w_A 439 L-EVGEVYINRGMGE---------QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYI 486 (497)
T ss_dssp C-CSSEEEESCCSCC---------CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEE
T ss_pred C-CeeEEEEcCCCCC---------CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEE
Confidence 6 4999999976432 1345544 4567777778888987766543
No 10
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=96.89 E-value=0.11 Score=54.71 Aligned_cols=323 Identities=16% Similarity=0.137 Sum_probs=180.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~ 151 (485)
...+-.+..+++-+.++++.|+=..-.++..-+-. .-+..|+ ....+.++..+++++++...+.+.
T Consensus 46 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~ea~~ev------~~~~~~~~~~a~~~~~~~~~~~~~---- 111 (484)
T 3ros_A 46 EPASRAEILHDIANALKEHEDELAKMMTLEMGKLL----SESKEEV------ELCVSICNYYADHGPEMLKPTKLN---- 111 (484)
T ss_dssp CTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH----HHHHHHH------HHHHHHHHHHHHHHHHHTSCEEEC----
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHHHHH------HHHHHHHHHHHHHHHHhcCCeecc----
Confidence 34455566777777778887776666666554310 0000010 122334444455554443322221
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hh
Q 011437 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-IL 227 (485)
Q Consensus 152 ~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy 227 (485)
.+|...-.++.|+.-|++..|.- || ...+.-.+||-.||+.=|+ -|.. .-.... +......+|+.+ ++
T Consensus 112 --~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~~aGlP~gvv 183 (484)
T 3ros_A 112 --SDLGNAYYLKQSTGVIMACEPWN---FPLYQVIRVFAPNFIVGNPILL--KHAH-NVPGSAALTAKIIKRAGAPEGSL 183 (484)
T ss_dssp --CTTSEEEEEEECCCEEEEECCSS---STTHHHHHHHHHHHHHTCCEEE--ECCT-TCHHHHHHHHHHHHHHTCCTTSE
T ss_pred --CCCceeEEEecCCceEEEECCCc---hHHHHHHHHHHHHHHcCCEEEE--ECCC-CChHHHHHHHHHHHHhCcCcCeE
Confidence 24556778899999999999963 44 4445677899999976544 3432 111122 334455666643 22
Q ss_pred h--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHH
Q 011437 228 K--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 299 (485)
Q Consensus 228 ~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vAa 299 (485)
. .|+...+++|. .-|+||+|.=-|..=| ++|+.+- .|-.. +-|-|= +|-|++||.+..|.
T Consensus 184 ~vv~g~~~~~~~L~----~~p~vd~I~fTGS~~~G~~i~~~aa~~lk-----~v~lE-LGGk~p--~iV~~dADl~~Aa~ 251 (484)
T 3ros_A 184 INLYPSYDQLADII----ADPRIQGVALTGSERGGSAVAEAAGKNLK-----KSTME-LGGNDA--FIVLDDADPQVLRN 251 (484)
T ss_dssp EEECCCHHHHHHHH----TSTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCCE--EEECTTCCHHHHHH
T ss_pred EEEeCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHhccCC-----ceEee-cCCCCc--ceeCCCCCHHHHHH
Confidence 2 24344445454 2488999986665432 2332221 02111 124443 34466799998887
Q ss_pred hhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC---
Q 011437 300 DLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH--- 350 (485)
Q Consensus 300 DLLaQAEHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~--- 350 (485)
.++.-+=... .|...++... ++. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 252 ~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~ 329 (484)
T 3ros_A 252 VLNDARTYNDGQVCTSSKRIIVEK-SRY-DEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAK 329 (484)
T ss_dssp HHTTTTTGGGGCCTTSCCEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhcCCCCCccCCceEEEcH-HHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCe
Confidence 7765332222 2333333333 343 7777777776665420 1122222111
Q ss_pred -----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhc
Q 011437 351 -----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESII 388 (485)
Q Consensus 351 -----------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I 388 (485)
| .|+.++|+|||++++|..--=| ..|.++|.. .++.++
T Consensus 330 v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l 409 (484)
T 3ros_A 330 VFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQI 409 (484)
T ss_dssp EEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHS
T ss_pred EEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhC
Confidence 2 2455789999999999854322 567788864 566777
Q ss_pred cccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEEE
Q 011437 389 ENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 389 ~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
.+|.|++..++.. +.-+|-+ |..|..|..+++.|+..-++..
T Consensus 410 -~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 456 (484)
T 3ros_A 410 -ETGMTVINGRWIT---------SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456 (484)
T ss_dssp -CSSCCEETSCCCC---------CTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEE
T ss_pred -ccceEEECCCCCC---------CCCCCcCCcCcccCCcCchHHHHHHhheeEEEEE
Confidence 5899999974321 2335544 4567777788999998877654
No 11
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=96.87 E-value=0.52 Score=50.00 Aligned_cols=317 Identities=15% Similarity=0.095 Sum_probs=177.8
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc-----CC
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK-----SA 147 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~-----~~ 147 (485)
..+-.+..+++-+.++++.|+=..-.++...+-..+. | +..+++.++.|...-. ..
T Consensus 73 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---------------e----v~~~~~~~~~~a~~~~~~~~~~~ 133 (517)
T 3r31_A 73 PMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---------------I----VADPTSGADAFEFFGGIAPSALN 133 (517)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---------------H----HHSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---------------H----HHHHHHHHHHHHHHhhhcccccc
Confidence 3344556667777777777765555555554311000 1 2333444443332211 11
Q ss_pred CceEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCc
Q 011437 148 ETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVT 224 (485)
Q Consensus 148 ~~~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~ 224 (485)
.......+|. .-.++.|+.-|++..|. -|| ...+.-++||-.||+.=| +=|.. .-.... +......+|+.
T Consensus 134 g~~~~~~~~~-~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VV--lKps~-~tp~t~~~l~~ll~eaGlP 206 (517)
T 3r31_A 134 GDYIPLGGDF-AYTKRVPLGVCVGIGAW---NYPQQIACWKAAPALVAGNAMV--FKPSE-NTPLGALKIAEILIEAGLP 206 (517)
T ss_dssp CCEEECSSSE-EEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT-TSCSHHHHHHHHHHHTTCC
T ss_pred CcccccCCCc-ceEEEcCccEEEEECCC---cchHHHHHHHHHHHHHcCCEEE--EEcCc-ccHHHHHHHHHHHHHhCcC
Confidence 2222334566 77889999999999996 355 444566789999996544 44432 112223 44455677764
Q ss_pred c-hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH
Q 011437 225 H-ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 295 (485)
Q Consensus 225 e-Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~ 295 (485)
. ++. -||...-.+|. .-|.||+|.=-|..=| ++|+.+. .|-. =+-|-+= +|-|++||.+
T Consensus 207 ~gvv~vv~g~~~~g~~L~----~~p~vd~I~FTGS~~~G~~i~~~aa~~lk-----~v~l-ElGGk~p--~IV~~dADl~ 274 (517)
T 3r31_A 207 KGLFNVIQGDRDTGPLLV----NHPDVAKVSLTGSVPTGRKVAAAAAGHLK-----HVTM-ELGGKSP--MIVFDDADIE 274 (517)
T ss_dssp TTSEEECCCCTTHHHHHH----TCTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEE-ECCCCEE--EEECTTSCHH
T ss_pred cccEEEEECCHHHHHHHH----hCCCcCEEeccCCHHHHHHHHHHhhcCCC-----cEEE-EcCCcCe--EEEecCCCHH
Confidence 2 322 25666656665 2588999987775433 2222211 0111 1124333 4446679999
Q ss_pred HHHHhhhhccCcCC----CCce-EEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh-
Q 011437 296 HIAADLLSQAEHGP----DSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA- 347 (485)
Q Consensus 296 ~vAaDLLaQAEHdp----~a~a-iLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s- 347 (485)
..|..++.-+=... .|.. +||-.+ .. ++..+.+.+.++.+.- .+.++.+
T Consensus 275 ~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 351 (517)
T 3r31_A 275 SAVGGAMLGNFYSSGQVCSNGTRVFVQKK--AK-ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGK 351 (517)
T ss_dssp HHHHHHHHHHTSCCHHHHTTCEEEEEEGG--GH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceeccCceEEEeHH--HH-HHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHH
Confidence 88877765443332 2333 444332 43 6666666555544320 0111111
Q ss_pred -------------------------------------h-c--CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH-
Q 011437 348 -------------------------------------L-G--HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE- 382 (485)
Q Consensus 348 -------------------------------------l-~--~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~- 382 (485)
+ + .| .|+.++|+|||++++|..--=| ..|.++|..
T Consensus 352 ~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 431 (517)
T 3r31_A 352 AEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLAR 431 (517)
T ss_dssp HHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHH
T ss_pred hCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHH
Confidence 1 1 12 3456899999999999853222 567788864
Q ss_pred --hHHhhccccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEEE
Q 011437 383 --KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 383 --~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
.+++++ .+|.|++..++.. +.-+| -+|..|+.|..+++.|+..-++..
T Consensus 432 a~~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 486 (517)
T 3r31_A 432 AHRVVDGL-EAGTLWINTYNLC---------PVEIPFGGSKQSGFGRENSAAALEHYSELKTVYV 486 (517)
T ss_dssp HHHHHHHS-CCSEEEESSCCCC---------CTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEE
T ss_pred HHHHHHHC-CcceEEECCCCCC---------CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 577777 5999999985421 22344 455678888899999998877653
No 12
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=96.80 E-value=0.32 Score=50.78 Aligned_cols=281 Identities=15% Similarity=0.142 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHh--ccCCC-ceEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCC
Q 011437 130 FDVAYNNIYAFHLA--QKSAE-TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPP 205 (485)
Q Consensus 130 i~~A~~nI~~Fh~~--Q~~~~-~~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP 205 (485)
++.+++.++.|... ++-+. ......++.....++.|+.-||+..|. -|| ...+.-.+||-.||+.=|+=-+|-
T Consensus 88 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---NfP~~~~~~~~~~ALaaGN~VVlKps~~ 164 (474)
T 4h7n_A 88 IDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPW---NFPLTLSMIDTIPALLAGCAVVVKPSEI 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECS---SSHHHHHHTTHHHHHHHTCEEEEEECTT
T ss_pred HHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCC---CcHHHHHhcccCcchhcCCceeeccccc
Confidence 55566666655431 11122 222334677788889999999999996 367 455556789999998654443332
Q ss_pred CCCCCchH-HHHHHHHcCCc-chh--hcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccc
Q 011437 206 SQDGSICK-VLYCAKKAGVT-HIL--KAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISI 275 (485)
Q Consensus 206 ~~~G~i~p-iLaAA~l~Gv~-eIy--~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgI 275 (485)
.+ ...- ++.++..+|.- .++ .-||.....+|. +.||+|.=-|..-| .+|+++.- |..
T Consensus 165 tp--~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~------~~v~~v~FTGS~~~G~~i~~~aa~~~~~-----v~l 231 (474)
T 4h7n_A 165 AP--RFVAPLLMALNTVPELRDVLIFVEGGGETGANLI------NYVDFVCFTGSVATGREVAETAARRFIP-----AYL 231 (474)
T ss_dssp SC--TTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHH------TTCSEEEEESCHHHHHHHHHHHHHHTCC-----EEE
T ss_pred Cc--hHHHHHHhhhhhhcccccceeeccccchhhhhhh------hccceEEeccccchhhhhhhhhhccccc-----ccc
Confidence 11 1122 44444445442 232 246666666664 45888876665333 33444220 111
Q ss_pred cCCCCCcEEEEEecCCCCHHHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC-----------
Q 011437 276 DMPAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------- 340 (485)
Q Consensus 276 D~~AGPSEvlIIAD~sAnP~~vAaDLLaQAEHd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------- 340 (485)
- +-|=+ -+|-+++||.+..|..++.-+=.. -.+...++.... .. ++..+.+.+.++.+.-
T Consensus 232 E-lGGk~--p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~g 306 (474)
T 4h7n_A 232 E-LGGKD--PAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAES-KF-EEFYHQLIAKAHRLQLAYPLVEDGAIG 306 (474)
T ss_dssp E-CCCCE--EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGG-GH-HHHHHHHHHHHHHCCBCCSSGGGCSBC
T ss_pred c-CCCcC--ccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHH-HH-HHHHHHHHHHhhccccCCCcccccccC
Confidence 1 12322 244567799998887775432211 123333333322 32 4444444443333210
Q ss_pred -------H----HHHHHhhcC---------------------------------------C---eEEEeCCHHHHHHHhh
Q 011437 341 -------G----EFASKALGH---------------------------------------S---FMVFARDMLEGISFSN 367 (485)
Q Consensus 341 -------~----~ia~~sl~~---------------------------------------g---~ii~v~sl~eai~~~N 367 (485)
. +.+..+.+. | .|+.++|+|||++++|
T Consensus 307 pli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 386 (474)
T 4h7n_A 307 PIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLAN 386 (474)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHH
Confidence 0 111222111 2 3566899999999999
Q ss_pred hhc-cccccccccChH---hHHhhccccceeccCCCCCccccccccCCCCCCC-----CCCcc-ccccCCcccccceeee
Q 011437 368 LYA-PEHLIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYA-RMYGGVSLDSFLKYMT 437 (485)
Q Consensus 368 ~~A-PEHLel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~A-R~~sgLsV~~FlK~~s 437 (485)
.-- +=-..|.++|.. .+..+++ +|.|++..++.. +..|-+| .+|.. |..|.-+++.|++.-+
T Consensus 387 ~~~~GL~a~v~t~d~~~a~~~a~~l~-aG~v~iN~~~~~-------~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~ 458 (474)
T 4h7n_A 387 DTIYGLSAAVFAGSEDEALKVARQLN-AGAISINDAALT-------AMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQA 458 (474)
T ss_dssp CSSCCSEEEEECSSHHHHHHHHTTSC-CSEEEESSSCGG-------GTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEE
T ss_pred cCCCCCeEEEEeCCHHHHHHHHHhCC-eeEEEECCCCcc-------CCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEE
Confidence 742 223567788865 4556664 899999975432 2234444 44443 6666678899998877
Q ss_pred EE
Q 011437 438 VQ 439 (485)
Q Consensus 438 ~~ 439 (485)
+.
T Consensus 459 v~ 460 (474)
T 4h7n_A 459 FL 460 (474)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 13
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=96.78 E-value=0.68 Score=48.59 Aligned_cols=322 Identities=16% Similarity=0.121 Sum_probs=178.4
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCce
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETS 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~-~~~~ 150 (485)
...+-.+..+++-+.++++.|+=..-.++..-+- + .+.+.-+..+++.++.|...-.. ....
T Consensus 68 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~~~~~a~~~~~~~g~~ 130 (487)
T 2w8n_A 68 SAKERSSLLRKWYNLMIQNKDDLARIITAESGKP----------------L-KEAHGEILYSAFFLEWFSEEARRVYGDI 130 (487)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHHHGGGCCCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 4445566677777777777776555555544321 0 11112266777777766543221 1111
Q ss_pred EEe-cCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-h
Q 011437 151 VEN-MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-I 226 (485)
Q Consensus 151 ~~~-~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-I 226 (485)
+.. .+|...-.++.|+.-|++..|.- +|+ ...+...+||-.||+.= |+=|.. .-.... +......+|... +
T Consensus 131 ~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~~~ALaaGN~V--VlKps~-~tp~t~~~l~~l~~~aGlP~gv 205 (487)
T 2w8n_A 131 IHTPAKDRRALVLKQPIGVAAVITPWN-FPS-AMITRKVGAALAAGCTV--VVKPAE-DTPFSALALAELASQAGIPSGV 205 (487)
T ss_dssp ECCSCTTCEEEEEEEECCEEEEECCSS-STT-HHHHHHHHHHHHHTCEE--EEECCT-TCCHHHHHHHHHHHHHTCCTTS
T ss_pred cccCCCCceeEEEEecceEEEEECCCc-chH-HHHHHHHHHHHHcCCEE--EEECCC-cchHHHHHHHHHHHHhCCCCCe
Confidence 111 24656667889999999999963 333 34456788999999843 333432 222333 445556677653 2
Q ss_pred hh-c----c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCH
Q 011437 227 LK-A----G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 294 (485)
Q Consensus 227 y~-v----G-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP 294 (485)
+. + | |.+.-.+|. .-|.||+|.=-|..=| ++|+.+. .|-.. +-|-| -+|-|++||.
T Consensus 206 v~vv~~~~g~~~~~~~~L~----~~~~v~~V~fTGS~~~g~~i~~~aa~~~~-----pv~lE-lGGk~--p~iV~~dADl 273 (487)
T 2w8n_A 206 YNVIPCSRKNAKEVGEAIC----TDPLVSKISFTGSTTTGKILLHHAANSVK-----RVSME-LGGLA--PFIVFDSANV 273 (487)
T ss_dssp EEECCCCHHHHHHHHHHHT----TCTTEEEEEEEECHHHHHHHHHHHHTTTC-----EEEEE-ECEEE--EEEECTTSCH
T ss_pred EEEEecCCCCcHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHHhccCC-----cEEEe-cCCCC--eEEECCCCCH
Confidence 22 1 5 555545554 2588999984444322 2222111 02221 12333 4555677999
Q ss_pred HHHHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhc-CC---------------CH-------HHHHHh
Q 011437 295 VHIAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQS-LP---------------RG-------EFASKA 347 (485)
Q Consensus 295 ~~vAaDLLaQAEHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~-l~---------------r~-------~ia~~s 347 (485)
+..|-.++.-+=... .|...++... +.. ++..+.+.+.++. +. .. ..++.+
T Consensus 274 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a 351 (487)
T 2w8n_A 274 DQAVAGAMASKFRNTGQTCVCSNQFLVQR-GIH-DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDA 351 (487)
T ss_dssp HHHHHHHHHHHTCCCSCCCSEEEEEEEEH-HHH-HHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCccccCCEEEEcc-cHH-HHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHH
Confidence 988877765433222 2223333322 232 5555555555544 31 00 111111
Q ss_pred hc--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccccccccChH---
Q 011437 348 LG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE--- 382 (485)
Q Consensus 348 l~--------------------------------------~g---~ii~v~sl~eai~~~N~~A-PEHLel~~~~p~--- 382 (485)
.+ .| .++.++|+|||++++|..- +--..|.++|..
T Consensus 352 ~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~ 431 (487)
T 2w8n_A 352 VSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIW 431 (487)
T ss_dssp HTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHH
T ss_pred HHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHH
Confidence 10 01 2344789999999999852 223567788875
Q ss_pred hHHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011437 383 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 383 ~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~ 439 (485)
.++.++ .+|.|++..++.. +..+|-+ |..|+.|..+++.|+..-++.
T Consensus 432 ~~~~~l-~aG~v~vN~~~~~---------~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~ 483 (487)
T 2w8n_A 432 RVAEQL-EVGMVGVNEGLIS---------SVECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483 (487)
T ss_dssp HHHHHS-CSSEEEESCSCCC---------CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEE
T ss_pred HHHHhC-CeeeEEEcCCCCC---------CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEE
Confidence 466677 5999999975532 1125544 456777888899998877764
No 14
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=96.78 E-value=0.72 Score=48.76 Aligned_cols=326 Identities=17% Similarity=0.136 Sum_probs=180.8
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCce
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETS 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~-~~~~ 150 (485)
...+-.+..+++-+.++++.|+=..-.++...+-. .+.+.-+..+++.++.|...-.. ....
T Consensus 69 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~~~~~a~~~~~~~g~~ 131 (505)
T 3prl_A 69 PIHERVDLLYAWADLLEERKEIIGELIMHEVAKPK-----------------KSAIGEVSRTADIIRHTADEALRLNGET 131 (505)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCH-----------------HHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 44455566777778888888766655565554311 01122244555555544432111 0111
Q ss_pred EEec--C----ceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcC
Q 011437 151 VENM--K----GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAG 222 (485)
Q Consensus 151 ~~~~--~----Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~G 222 (485)
.... + |...-.++.|+.-|++..|.- +|+ ...+.-.+||-.||+.=|+ =|.. .-.... +..+...+|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-~P~-~~~~~~~a~ALaaGN~VVl--Kpse-~tp~ta~~l~~ll~eaG 206 (505)
T 3prl_A 132 LKGDQFKGGSSKKIALVEREPLGVVLAISPFN-YPV-NLAAAKIAPALVTGNTVVF--KPAT-QGSLSGIKMVEALADAG 206 (505)
T ss_dssp EEGGGSTTTCSSEEEEEEEEECSEEEEEECSS-STT-HHHHHHHHHHHHTTCEEEE--EECS-TTHHHHHHHHHHHHHTT
T ss_pred ccccccccccCCceeEEEEcCCcEEEEECCCc-cHH-HHHHHHHHHHHHcCCEEEE--ECCC-CChHHHHHHHHHHHHhC
Confidence 1111 2 455567789999999999973 333 3344567899999975443 3432 111122 223445567
Q ss_pred Ccc-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 223 VTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 223 v~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~-g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
+.. ++. -| |...-.+|. .-|+||+|.=-|..=|- |++..... -.|-.- +-|-+= +|-|++||.+..
T Consensus 207 lP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G--~~i~~~aal~~v~lE-LGGk~p--~iV~~dADl~~A 277 (505)
T 3prl_A 207 APEGIIQVVTGRGSVIGDHLV----EHPGIDMITFTGGTTTG--ERISEKAKMIPVVLE-LGGKDP--AIVLDDADLKLT 277 (505)
T ss_dssp CCTTSEEECCCCHHHHHHHHH----TCTTCCEEEEESCHHHH--HHHHHHCCSSCEEEE-CCCCEE--EEECTTCCHHHH
T ss_pred cCcCeEEEEeCCCHHHHHHHH----hCCCCCEEEEeCCHHHH--HHHHHHccCCcEEEE-CCCCCC--CccCCCCCHHHH
Confidence 642 222 24 666556665 25889999766664332 22111000 001111 123333 444667999887
Q ss_pred HHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------------HHHHHHhhcC--
Q 011437 298 AADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEFASKALGH-- 350 (485)
Q Consensus 298 AaDLLaQA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r---------------------~~ia~~sl~~-- 350 (485)
|..++.-+ =..-.|...++.. ++.. ++..+.+.+.++.+.- .+.++.+.+.
T Consensus 278 a~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga 355 (505)
T 3prl_A 278 ASQIVSGAFSYSGQRCTAIKRVFVQ-DSVA-DQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGA 355 (505)
T ss_dssp HHHHHHHHHGGGGCCSSSEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCccccCceEEEe-HHHH-HHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCC
Confidence 76665422 2223344444443 3453 7777777766665420 1223333221
Q ss_pred ---------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccCh---HhHHhhccc
Q 011437 351 ---------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDA---EKWESIIEN 390 (485)
Q Consensus 351 ---------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p---~~~l~~I~n 390 (485)
| .|+.++|+|||++++|..--=| ..|.++|. +.++.++ .
T Consensus 356 ~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~ 434 (505)
T 3prl_A 356 TLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHL-E 434 (505)
T ss_dssp EEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTS-C
T ss_pred EEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHC-C
Confidence 2 2455789999999999853332 56778886 4567777 5
Q ss_pred cceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011437 391 AGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 391 AGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~ 439 (485)
+|.|++..++. +.+.-+|- +|..|+.|..+++.|+..-++.
T Consensus 435 aG~V~iN~~~~--------~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~ 480 (505)
T 3prl_A 435 VGTVHINAKTE--------RGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480 (505)
T ss_dssp SSEEEESSCCC--------SCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred eeEEEEcCCCC--------CCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEE
Confidence 99999997653 12344564 5567777778889998877754
No 15
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=96.76 E-value=0.63 Score=48.81 Aligned_cols=322 Identities=13% Similarity=0.122 Sum_probs=175.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCc
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAET 149 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~--Q~~~~~ 149 (485)
...+-.+..+++-+.++++.|+=..-.++...+- + .+.+.-+..+++.++.|... .+...+
T Consensus 63 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~-------------~~a~~ev~~~~~~~~~~a~~~~~~~g~~ 125 (486)
T 1t90_A 63 AVPRRARILFNFQQLLSQHKEELAHLITIENGKN----T-------------KEALGEVGRGIENVEFAAGAPSLMMGDS 125 (486)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCC----H-------------HHHHHHHHHHHHHHHHHTTHHHHHCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H-------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 4445566677777777777776555555555321 0 01111245555666554321 111111
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-
Q 011437 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH- 225 (485)
Q Consensus 150 ~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e- 225 (485)
.....+|...-.++.|+.-|++..|. -|| ...+...+||-.||+.=| +=|.. .-.... +......+|...
T Consensus 126 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~~aGlP~g 199 (486)
T 1t90_A 126 LASIATDVEAANYRYPIGVVGGIAPF---NFPMMVPCWMFPMAIALGNTFI--LKPSE-RTPLLTEKLVELFEKAGLPKG 199 (486)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCS---SCTTHHHHHHHHHHHHTTCEEE--EECCS-SSCHHHHHHHHHHHHTTCCTT
T ss_pred cccCCCCceeEEEecccCEEEEECCC---chhHHHHHHHHHHHHHcCCEEE--EECCC-CChHHHHHHHHHHHHhCCCCC
Confidence 11123566667788999999999997 355 344567889999998544 33432 112233 444555676642
Q ss_pred hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 226 ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 226 Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
++. -||...-.+|.= -|.||+|.=-|..=| ++|+.+. .|-.. +-|-|= +|-|++||.+..
T Consensus 200 vv~vv~g~~~~~~~L~~----~~~v~~I~fTGS~~~g~~i~~~aa~~~~-----pv~lE-lGGk~p--~iV~~dADl~~A 267 (486)
T 1t90_A 200 VFNVVYGAHDVVNGILE----HPEIKAISFVGSKPVGEYVYKKGSENLK-----RVQSL-TGAKNH--TIVLNDANLEDT 267 (486)
T ss_dssp SEEECCCSHHHHHHHHH----CTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCEE--EEECTTSCHHHH
T ss_pred EEEEEECCHHHHHHHHh----CCCCCEEEEeCCHHHHHHHHHHHhccCC-----cEEec-cCCCCc--EEECCCCCHHHH
Confidence 222 255554455542 478999985555322 1222211 12211 234443 334566898887
Q ss_pred HHhhhhccC----cCCCCceE-EEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh---
Q 011437 298 AADLLSQAE----HGPDSQVV-LVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--- 347 (485)
Q Consensus 298 AaDLLaQAE----Hdp~a~ai-LvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s--- 347 (485)
|-.++.-+= +--.|... ++.... . ++..+.+.+.++.+.- .+.++.+
T Consensus 268 a~~i~~~~~~n~GQ~C~a~~rvv~v~~~--~-d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 344 (486)
T 1t90_A 268 VTNIVGAAFGSAGERCMACAVVTVEEGI--A-DEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEE 344 (486)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEHHH--H-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcccCCeeEEecCC--H-HHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhC
Confidence 776654321 22334444 343332 3 5666666655554431 0111111
Q ss_pred ---------------------------------hc---CC---eEEEeCCHHHHHHHhhhhc-cccccccccChH---hH
Q 011437 348 ---------------------------------LG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KW 384 (485)
Q Consensus 348 ---------------------------------l~---~g---~ii~v~sl~eai~~~N~~A-PEHLel~~~~p~---~~ 384 (485)
+. .| .++.++|+|||++++|..- +--..|.++|.. .+
T Consensus 345 Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~ 424 (486)
T 1t90_A 345 GARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYF 424 (486)
T ss_dssp TCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHH
T ss_pred CCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHH
Confidence 11 12 3456889999999999842 223567787864 56
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCCCC-----cc--ccccCCcccccceeeeEEE
Q 011437 385 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YA--RMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 385 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~A--R~~sgLsV~~FlK~~s~~~ 440 (485)
+.++ .+|.|++..++. .++.-+|-+| .. |..|.-+++.|+..-++..
T Consensus 425 ~~~l-~aG~v~vN~~~~--------~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~ 478 (486)
T 1t90_A 425 RENI-DAGMLGINLGVP--------APMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478 (486)
T ss_dssp HHHC-CCSEEEESCSCC--------CCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEE
T ss_pred HHhC-CcCeEEECCCCC--------CCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 6677 699999996432 1223467655 33 5555566888887777643
No 16
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=96.74 E-value=0.29 Score=51.88 Aligned_cols=265 Identities=16% Similarity=0.197 Sum_probs=142.9
Q ss_pred eEEEEEEEeceeeeEeecCCCCCcchHhh---hccccceecCCCeEEEEcCCCCCCCchH----HHH-----HHHHcCCc
Q 011437 157 VRCKRVARSIGSVGLYVPGGTAVLPSTAL---MLSVPAQIAGCKTVVLATPPSQDGSICK----VLY-----CAKKAGVT 224 (485)
Q Consensus 157 v~lgqr~~PiervG~YVPGG~a~ypStvL---M~aIPAkVAGV~~Ivv~TPP~~~G~i~p----iLa-----AA~l~Gv~ 224 (485)
...-.++.|+.-|++..|.- ||-... .-++||-.||+.= |+-|.. ..| .|+ +...+|+.
T Consensus 161 ~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~a~ALaaGN~V--VlKps~----~tp~t~~~l~~l~~~~l~~aGlP 231 (528)
T 3v4c_A 161 QEIRLVQRPVGPVAVFGASN---FPLAFSTAGGDTAAALAAGCPV--VVKGHS----AHPGTGEIVAEAVDAAIRKTGVH 231 (528)
T ss_dssp CCEEEEEEECSCEEEECCSS---STTTTSTTSHHHHHHHHHTCCE--EEECCT----TCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcceeEeeCCcEEEEECCCc---chHHHhhhhhhhHHHHhcCCEE--EEECCC----CCcHHHHHHHHHHHHHHHhcCCC
Confidence 33457899999999999963 554432 4789999999754 344432 233 222 22346765
Q ss_pred c-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCC--
Q 011437 225 H-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYA-- 292 (485)
Q Consensus 225 e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sA-- 292 (485)
+ ++. .| |...-.+|.= -|.||+|.=-|..=| ++|+++--. .| +=-+-|-+=++| |++|
T Consensus 232 ~gvv~vv~g~~~~~g~~L~~----~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~---pv-~lElGGk~p~iV--~~dAd~ 301 (528)
T 3v4c_A 232 PGVFSLIQGGSRDVGHALVQ----HPHIKAVGFTGSLAGGRALFDLCAARPEPI---PF-FGELGSVNPMFL--LPEALK 301 (528)
T ss_dssp GGGEEEECCCCHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHHSSSCC---CE-EEECCCCCCEEE--CHHHHH
T ss_pred cCeEEEEeCCCHHHHHHHHh----CCCCCEEEEECChHHHHHHHHHHhhccCCC---ce-EEecCCCCeEEE--CCCCCh
Confidence 3 332 23 5555555552 488999986665322 222222000 01 111234444444 4446
Q ss_pred -CHHHHHHhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC------------HHHH-----------
Q 011437 293 -SPVHIAADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------------GEFA----------- 344 (485)
Q Consensus 293 -nP~~vAaDLLaQ----AEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r------------~~ia----------- 344 (485)
|.+..|..++.- +=.--.|...++....... +++.+.+.+.++.+.- .+.+
T Consensus 302 ~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~~~~~~gp~~~~~~~~~v~~~~~~~Ga~v 380 (528)
T 3v4c_A 302 ARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA-DRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKP 380 (528)
T ss_dssp HHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH-HHHHHHHHHHHHTCCCEECSCHHHHHHHHHHHHHHHTCTTCEE
T ss_pred hhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH-HHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCCEE
Confidence 444444444322 2222233344444332232 5555555555543310 0000
Q ss_pred --------------------H-----Hhhc---CC---eEEEeCCHHHHHHHhhhhcccc-cccccc--Ch---HhHHhh
Q 011437 345 --------------------S-----KALG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVK--DA---EKWESI 387 (485)
Q Consensus 345 --------------------~-----~sl~---~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~--~p---~~~l~~ 387 (485)
. ..+. .| .|+.++|+|||++++|..--=| ..|.++ |. ..+..+
T Consensus 381 ~~gG~~~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~ 460 (528)
T 3v4c_A 381 LLATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPV 460 (528)
T ss_dssp EECCCCCTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHH
T ss_pred EeCCCcCCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHH
Confidence 0 1122 13 3456789999999999853222 556677 43 457777
Q ss_pred cc-ccceeccCCCCCcc-cccc--ccCCCCCCCCCCccccc--cCCcccccceeeeEEEeCHH
Q 011437 388 IE-NAGSVFLGEWTPES-VGDY--ASGTNHVLPTYGYARMY--GGVSLDSFLKYMTVQSLTEE 444 (485)
Q Consensus 388 I~-nAGsIFlG~~tp~a-~GDY--~aGpNHvLPT~G~AR~~--sgLsV~~FlK~~s~~~~s~~ 444 (485)
++ .+|.|++..++... .++. +.|| .+-+|..|.. |..+++.|++..++|.+.+.
T Consensus 461 l~~~aG~V~vN~~~~~~~~~~~~pfGG~---~~~Sg~gr~~~~G~~gl~~~~~~k~~q~~p~~ 520 (528)
T 3v4c_A 461 LERKAGRVLVNGFPTGVEVVDSMVHGGP---YPASTNFGATSVGTMSIRRFLRPVAYQNMPED 520 (528)
T ss_dssp HHHHEEEEEESSCTTCCCCSTTCCCCCT---TTTBSCTTCCSSSGGGGGGGEEEEEEESCCGG
T ss_pred HhhcCcEEEEcCCCCCCccCCCCCCCCC---CCCCCCCCCCCCcHHHHHHhchhHHhhcCCcc
Confidence 77 79999999865522 1111 1111 2344557764 77899999999999988764
No 17
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=96.73 E-value=0.57 Score=49.15 Aligned_cols=321 Identities=15% Similarity=0.104 Sum_probs=170.4
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--cCCCceE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ--KSAETSV 151 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q--~~~~~~~ 151 (485)
.+-.+..+++-+.++++.|+=..-.++..-+-. .+.+.-+..+++.++.|.+.. .......
T Consensus 64 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~ 126 (490)
T 3ju8_A 64 EQRIELLERFAATLKSRADELARVIGEETGKPL-----------------WESATEVTSMVNKVAISVQAFRERTGEKSG 126 (490)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 344455666666677777665555555443210 011122444455554443221 1222221
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hhh
Q 011437 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-ILK 228 (485)
Q Consensus 152 ~~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy~ 228 (485)
... +-....++.|+.-|++..|. .+|+ ++.+.-.+||-.||+. |++-|.. .-.... +......+|+.+ ++.
T Consensus 127 ~~~-~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~~aGlP~gvv~ 200 (490)
T 3ju8_A 127 PLA-DATAVLRHKPHGVVAVFGPY-NFPG-HLPNGHIVPALLAGNC--VVFKPSE-LTPKVAELTLKAWIQAGLPAGVLN 200 (490)
T ss_dssp EET-TEEEEEEEEECSEEEEECCS-SSTT-HHHHHHHHHHHHHTCE--EEEECCT-TCHHHHHHHHHHHHHTTCCTTTEE
T ss_pred cCC-CCeeeEEECCCCEEEEECCC-cchH-HHHHHHHHHHHHcCCe--EEEECCC-CCcHHHHHHHHHHHHhCcCcCeEE
Confidence 222 33344568999999999996 3443 5667778899999964 3444432 111112 333455677653 222
Q ss_pred --cchHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcc-cccCCCCCcEEEEEecCCCCHHHHHHhhhhc
Q 011437 229 --AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMI-SIDMPAGPSEVLVIADIYASPVHIAADLLSQ 304 (485)
Q Consensus 229 --vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~A-Kr~v~~~~g~V-gID~~AGPSEvlIIAD~sAnP~~vAaDLLaQ 304 (485)
-||...-.+|.- -|+||+|.=-|..=|-.+ .+..+...-.| ... +-|-+= +|-|++||.+..|..++.-
T Consensus 201 vv~g~~~~~~~L~~----~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lE-lGGk~p--~iV~~dADl~~Aa~~i~~~ 273 (490)
T 3ju8_A 201 LVQGGRETGVALAA----HRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALE-MGGNNP--LVVEEVADLDAAVYTIIQS 273 (490)
T ss_dssp ECCCSHHHHHHHHT----CTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEE-CCCCEE--EEECCCSCHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHh----CCCcCEEEEECcHHHHHHHHHHhhccCCCcEEee-cCCCCe--EEECCCCCHHHHHHHHHHH
Confidence 356665566652 588999987777644322 11111100011 111 225443 4456679999888777643
Q ss_pred cCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC-----C------------------HHHHHHhhcCC------
Q 011437 305 AEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-----R------------------GEFASKALGHS------ 351 (485)
Q Consensus 305 AEHd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l~-----r------------------~~ia~~sl~~g------ 351 (485)
+=.. -.+...++....... ++..+.+.+.++.+. . .+.++.+.+.|
T Consensus 274 ~~~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~g 352 (490)
T 3ju8_A 274 AFISAGQRCTCARRLLVPQGAWG-DALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLA 352 (490)
T ss_dssp HHGGGGCSTTSEEEEEEESSHHH-HHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHhcCCCCCcCCCEEEEECCccH-HHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 3222 233333333333222 556666665555441 0 12233332211
Q ss_pred ----------------------------------eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhccccce
Q 011437 352 ----------------------------------FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGS 393 (485)
Q Consensus 352 ----------------------------------~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I~nAGs 393 (485)
.++-++|+|||++++|..--=| ..|.++|.. .+..++ .+|.
T Consensus 353 g~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~ 431 (490)
T 3ju8_A 353 MTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVES-RAGI 431 (490)
T ss_dssp CCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHC-CSSE
T ss_pred CCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhc-Ccce
Confidence 2345789999999999853322 567788864 455565 5899
Q ss_pred eccCCCCCccccccccCCCCCCCCCCccccccCCccccccee
Q 011437 394 VFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKY 435 (485)
Q Consensus 394 IFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~FlK~ 435 (485)
|++..++. +.+.-+|-+|. +.++--+++.|+..
T Consensus 432 v~vN~~~~--------~~~~~~PfGG~-~~SG~~~~~~~~~~ 464 (490)
T 3ju8_A 432 VNWNKQLT--------GAASSAPFGGI-GASGNHRPSAYYAA 464 (490)
T ss_dssp EEESSCSS--------CCCTTSEECCC-GGGBSSCCEETTHH
T ss_pred EEECCCcC--------CCCCCCCcCCc-cccchhHHHhhhee
Confidence 99997654 23355787774 44444455555543
No 18
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=96.68 E-value=0.27 Score=51.54 Aligned_cols=319 Identities=17% Similarity=0.128 Sum_probs=177.3
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHhccC-CCceE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVK-EAFDVAYNNIYAFHLAQKS-AETSV 151 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~-~Ai~~A~~nI~~Fh~~Q~~-~~~~~ 151 (485)
.+-.+..+++-+.++++.|+=..-.++...+- + .+.+ .-+..+.+.++.|...-.. .....
T Consensus 66 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~-------------~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~ 128 (490)
T 2ve5_A 66 MQRSRILRRAVDILRERNDELAALETLDTGKP----L-------------AETRSVDIVTGADVLEYYAGLVPAIEGEQI 128 (490)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H-------------HHHTTTHHHHHHHHHHHHHHHGGGCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H-------------HHHhHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 34455566666777777766544445544421 0 0111 0244556666655543221 11112
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCcchH-hhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hh
Q 011437 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-IL 227 (485)
Q Consensus 152 ~~~~Gv~lgqr~~PiervG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy 227 (485)
...+|...-.++.|+.-|++..|. -||-. ++.-.+||-.||+.=|+=.+|- -.... +......+|+.+ ++
T Consensus 129 ~~~~~~~~~~~~~P~GVv~~I~pw---N~P~~~~~~~~~~ALaaGN~vVlKps~~---tp~t~~~l~~l~~~aGlP~gvv 202 (490)
T 2ve5_A 129 PLRETSFVYTRREPLGVVAGIGAW---NYPVQIALWKSAPALAAGNAMIFKPSEV---TPLTALKLAEIYTEAGVPDGVF 202 (490)
T ss_dssp EEETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEEECCTT---SCHHHHHHHHHHHHHTCCTTSE
T ss_pred cCCCCceeeEeeccccEEEEECCC---cchHHHHHHHHHHHHHcCCEEEEECCCc---chHHHHHHHHHHHHhCcCcCeE
Confidence 224566677889999999999996 35643 3466789999997655433321 11222 334455666542 22
Q ss_pred h--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------H-HHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 228 K--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------A-AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 228 ~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~-AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
. -| |...-.+|. .-|.||+|.=-|..-|- + |+.+-- |-.. +-|-+= +|-|++||.+..
T Consensus 203 ~vv~g~~~~~~~~L~----~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~-----v~lE-lGGk~p--~iV~~dADl~~A 270 (490)
T 2ve5_A 203 NVLTGSGREVGQWLT----EHPLIEKISFTGGTSTGKKVMASASSSSLKE-----VTME-LGGKSP--LIIFPDADLDRA 270 (490)
T ss_dssp EECCSCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHHCCE-----EEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEeCCChHHHHHHH----hCCCcCEEEEeCCcHHHHHHHHhchhccccc-----eEEE-cCCCce--eEECCCCCHHHH
Confidence 1 23 555555554 25889999877765442 2 222110 1111 124433 445677899887
Q ss_pred HHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC-
Q 011437 298 AADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH- 350 (485)
Q Consensus 298 AaDLLaQAE----Hdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~- 350 (485)
|..++.-+= .--.|...++... +.. ++..+.+.+.++.+.- .+.++.+.+.
T Consensus 271 a~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~G 348 (490)
T 2ve5_A 271 ADIAVMANFFSSGQVCTNGTRVFIHR-SQQ-ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQK 348 (490)
T ss_dssp HHHHHHHHHGGGGCCTTCCCEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCccCCCeEEEcH-HHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCC
Confidence 776654221 1223333333333 343 7777777777665520 1223332211
Q ss_pred -----------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---
Q 011437 351 -----------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE--- 382 (485)
Q Consensus 351 -----------------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~--- 382 (485)
| .++.++|+|||++++|..--=| ..|.++|..
T Consensus 349 a~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 428 (490)
T 2ve5_A 349 ARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 428 (490)
T ss_dssp CEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred CEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 2 2455799999999999964322 567787765
Q ss_pred hHHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEE
Q 011437 383 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 383 ~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~FlK~~s~~ 439 (485)
.+..++ .+|.|++..+... ++-+|-+| ..|..|-.+++.|++.-++.
T Consensus 429 ~~~~~l-~aG~v~vN~~~~~---------~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~ 480 (490)
T 2ve5_A 429 RAIHRL-EAGICWINTWGES---------PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ 480 (490)
T ss_dssp HHHHHS-CCSEEEESCCSCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHhC-CcceEEECCCCCC---------CCCCCcCCCCCCCCCCcchHHHHHHhheeEEEE
Confidence 466676 4999999985421 24456554 56666667888898877654
No 19
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=96.67 E-value=0.84 Score=48.06 Aligned_cols=319 Identities=14% Similarity=0.050 Sum_probs=177.1
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC---C
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA---E 148 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~---~ 148 (485)
...+-.+..+++-+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++.|.. +..+ .
T Consensus 79 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---~-------------~ea~~ev~~~~~~~~~~a~-~~~~~~g~ 140 (500)
T 2j6l_A 79 PAPKRGEIVRQIGDALREKIQVLGSLVSLEMGK-I---L-------------VEGVGEVQEYVDICDYAVG-LSRMIGGP 140 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCC-C---H-------------HHHHHHHHHHHHHHHHHHH-HTTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-C---H-------------HHHHHHHHHHHHHHHHHHH-HHHHhcCc
Confidence 344555666777777777776544433443321 0 0 0111223444444443332 2221 2
Q ss_pred ceEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHH-------
Q 011437 149 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCA------- 218 (485)
Q Consensus 149 ~~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA------- 218 (485)
+.....+|...-.++.|+.-|++..|. -|| ...++..+||-.||+. ||+-|.. ..| .+..+
T Consensus 141 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~~al 211 (500)
T 2j6l_A 141 ILPSERSGHALIEQWNPVGLVGIITAF---NFPVAVYGWNNAIAMICGNV--CLWKGAP----TTSLISVAVTKIIAKVL 211 (500)
T ss_dssp EECCSSTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEEECCG----GGHHHHHHHHHHHHHHH
T ss_pred cccccCCCceeEEEEecccEEEEECCC---cchhhHHHHHHHHHHHhCCE--EEEECCC----ccHHHHHHHHHHHHHHH
Confidence 211122454455678999999999996 366 4667888999999875 4444542 344 22222
Q ss_pred HHcCCc-chhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEec
Q 011437 219 KKAGVT-HILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIAD 289 (485)
Q Consensus 219 ~l~Gv~-eIy~v--GGAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~g~VgID~~AGPSEvlIIAD 289 (485)
..+|+. .++.+ ||...-.+|. .-|+||+|.=-|..=|- +|+++- .|...+ -|-| -+|-|
T Consensus 212 ~~aGlP~gvv~vv~g~~~~g~~L~----~~~~vd~I~FTGS~~~g~~i~~~aa~~l~-----~v~lEL-GGk~--p~iV~ 279 (500)
T 2j6l_A 212 EDNKLPGAICSLTCGGADIGTAMA----KDERVNLLSFTGSTQVGKQVGLMVQERFG-----RSLLEL-GGNN--AIIAF 279 (500)
T ss_dssp HHTTCCGGGEEEECCSHHHHHHHH----HCTTCSEEEEESCHHHHHHHHHHHHHTTC-----EEEEEC-CCCE--EEEEC
T ss_pred HhhcCCcCeEEEEeCCHHHHHHHh----cCCCcCEEEEECCHHHHHHHHHHhccCCC-----ceEEEc-CCCC--ceEEC
Confidence 235664 33332 6765545554 24889999655554332 222211 244443 3555 34456
Q ss_pred CCCCHHHHHHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------H-------HH
Q 011437 290 IYASPVHIAADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------G-------EF 343 (485)
Q Consensus 290 ~sAnP~~vAaDLLaQAE----Hdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r---------------~-------~i 343 (485)
++||.+..|..++.-+= ..-.|...++.... .. ++..+.+.+.++.+.- . ..
T Consensus 280 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 357 (500)
T 2j6l_A 280 EDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES-IH-DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGA 357 (500)
T ss_dssp TTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETT-TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHH-HH-HHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHH
Confidence 67899887777654332 22334444444332 43 6677777766665520 0 11
Q ss_pred HHHhhc--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccccccccCh
Q 011437 344 ASKALG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDA 381 (485)
Q Consensus 344 a~~sl~--------------------------------------~g---~ii~v~sl~eai~~~N~~A-PEHLel~~~~p 381 (485)
++.+.+ .| .++.++|+|||++++|..- +--..|.++|.
T Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 437 (500)
T 2j6l_A 358 VEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDL 437 (500)
T ss_dssp HHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCH
T ss_pred HHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 222211 02 2344789999999999953 22366778888
Q ss_pred HhHHhhc----cccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEE
Q 011437 382 EKWESII----ENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 382 ~~~l~~I----~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~FlK~~s~~ 439 (485)
.....-. -.+|.|++..++.. .+.-+| .+|..|+.+..+++.|+..-++.
T Consensus 438 ~~a~~~~~~~~~~~G~V~vN~~~~~--------~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~ 496 (500)
T 2j6l_A 438 GRIFRWLGPKGSDCGIVNVNIPTSG--------AEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496 (500)
T ss_dssp HHHHHHHSTTSCCSSEEEESSCTTC--------CCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEE
T ss_pred HHHHHHHhhccCCeeEEEECCCCcc--------CCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEE
Confidence 6654433 36799999975421 111234 35777888888899999888764
No 20
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=96.67 E-value=0.66 Score=48.98 Aligned_cols=320 Identities=16% Similarity=0.102 Sum_probs=177.4
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC--ceE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE--TSV 151 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~--~~~ 151 (485)
.+-.+..+++-+.++++.|+=..-.++..-+- +.+....-+..+++.++.|.+. ..+. -.+
T Consensus 82 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~ev~~~~~~~~~~a~~-~~~~~g~~~ 144 (500)
T 1o04_A 82 SHRGRLLNRLADLIERDRTYLAALETLDNGKP----------------YVISYLVDLDMVLKCLRYYAGW-ADKYHGKTI 144 (500)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHH-TTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----------------HHHHHHHHHHHHHHHHHHHHHH-HHHhhCcce
Confidence 34455667777777777776555555544321 1111121255666666666542 2211 011
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hh
Q 011437 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-IL 227 (485)
Q Consensus 152 ~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy 227 (485)
...+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+=|.. .-.... +......+|+.+ ++
T Consensus 145 ~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~~aGlP~gvv 218 (500)
T 1o04_A 145 PIDGDFFSYTRHEPVGVCGQIIPW---NFPLLMQAWKLGPALATGNV--VVMKVAE-QTPLTALYVANLIKEAGFPPGVV 218 (500)
T ss_dssp CCSSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHHTCCTTSE
T ss_pred ecCCCceEEEEEecCCcEEEECCC---CchHHHHHHHHHHHHHcCCE--EEEECCc-cChHHHHHHHHHHHHhCCCcCeE
Confidence 123465666788999999999997 477 4555678899999985 4444542 212233 444555666642 32
Q ss_pred h--cc-hHHHHHHHhhcCCCCCCceEEecCCcH------HHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 228 K--AG-GAQAISAMAWGTESCPKVEKIFGPGNQ------YVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 228 ~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~------yVt~A-Kr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
. -| |...-.+|. .-|.||+|.=-|.. ..++| +.+. .|... +-|-|= +|-|++||.+..
T Consensus 219 ~vv~g~~~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~-----pv~lE-LGGk~p--~iV~~dADl~~A 286 (500)
T 1o04_A 219 NIVPGFGPTAGAAIA----SHEDVDKVAFTGSTEIGRVIQVAAGSSNLK-----RVTLE-LGGKSP--NIIMSDADMDWA 286 (500)
T ss_dssp EECCBCTTTHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHHTTCC-----EEEEE-CCCCEE--EEECTTSCHHHH
T ss_pred EEEecCcHHHHHHHH----hCCCcCEEEEECCHHHHHHHHHhhhhhcCc-----eEEEE-cCCcCe--EEECCCCCHHHH
Confidence 2 24 655555554 25889999744443 22333 1111 02111 225443 444566899887
Q ss_pred HHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhc--
Q 011437 298 AADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG-- 349 (485)
Q Consensus 298 AaDLLaQA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~-- 349 (485)
|-.++.-+ =.--.|...++... +.. +++.+.+.+.++.+. . ...++.+.+
T Consensus 287 a~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 364 (500)
T 1o04_A 287 VEQAHFALFFNQGQCSCAGSRTFVQE-DIY-DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEG 364 (500)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEH-HHH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCCCCCCCCCEEEEeh-hHH-HHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCC
Confidence 77765422 12223444444433 243 666666665554441 0 011111110
Q ss_pred ------------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccccccccChH---hHHh
Q 011437 350 ------------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWES 386 (485)
Q Consensus 350 ------------------------------------~g---~ii~v~sl~eai~~~N~~AP-EHLel~~~~p~---~~l~ 386 (485)
.| .++.++|+|||++++|..-- --..|.++|.. .++.
T Consensus 365 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 444 (500)
T 1o04_A 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQ 444 (500)
T ss_dssp CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHH
Confidence 12 34557899999999998522 22567777864 5667
Q ss_pred hccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011437 387 IIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 387 ~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
++ .+|.|++..++.. + .-+|- +|..|+.+..+++.|+..-++..
T Consensus 445 ~l-~aG~V~iN~~~~~-------~--~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~ 493 (500)
T 1o04_A 445 AL-QAGTVWVNCYDVF-------G--AQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493 (500)
T ss_dssp HC-CSSEEEESCSSCC-------C--TTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEE
T ss_pred hC-CeeEEEECCCCCC-------C--CCCCCCCcCCCCCCccchHHHHHHhcceEEEEE
Confidence 76 4899999976431 1 12454 45667777788999988877643
No 21
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=96.64 E-value=0.87 Score=47.82 Aligned_cols=326 Identities=17% Similarity=0.100 Sum_probs=182.5
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ceE
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TSV 151 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~-~~~ 151 (485)
..+-.+..+++-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|...-.+.. ...
T Consensus 71 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~ 133 (484)
T 3ifg_A 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKP-----------------LAEAKGEIAYAASFIEWFAEEGKRVAGDTL 133 (484)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 344455566777777777776554444444321 11223346777888876655322211 111
Q ss_pred E-ecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCc-chh
Q 011437 152 E-NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVT-HIL 227 (485)
Q Consensus 152 ~-~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~-eIy 227 (485)
. ..+|...-.++.|+.-|++..|.- +|+ ...+.-..||-.||+.=|+=-+|- -.... +......+|+. .++
T Consensus 134 ~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~a~ALaaGN~VVlKps~~---tp~t~~~l~~l~~~aGlP~gv~ 208 (484)
T 3ifg_A 134 PTPDANKRIVVVKEPIGVCAAITPWN-FPA-AMIARKVGPALAAGCPIVVKPAES---TPFSALAMAFLAERAGVPKGVL 208 (484)
T ss_dssp CCSSTTEEEEEEEEECSSEEEECCSS-STT-HHHHHHHHHHHHHTCCEEEECCTT---SCHHHHHHHHHHHHHTCCTTSE
T ss_pred cccCCCceeEEEecCCcEEEEECCCc-ChH-HHHHHHHHHHHHcCCEEEEECCCC---CcHHHHHHHHHHHHhCCCcccE
Confidence 1 124667778899999999999973 332 344456789999998755443331 12233 33445667763 222
Q ss_pred h--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHH-HHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHhhhh
Q 011437 228 K--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 303 (485)
Q Consensus 228 ~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AK-r~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vAaDLLa 303 (485)
. .| |...-.+|.- -|.||+|.=-|..=|-.+= +.....--.|... +-|-|=+ |-|++||.+..|..++.
T Consensus 209 ~vv~g~~~~~g~~L~~----~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lE-lGGk~p~--iV~~dADl~~Aa~~i~~ 281 (484)
T 3ifg_A 209 SVVIGDPKAIGTEITS----NPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLE-LGGNAPF--IVFDDADLDAAVEGAIA 281 (484)
T ss_dssp EECCBCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEE-CCCCCEE--EECTTSCHHHHHHHHHH
T ss_pred EEEeCCCHHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHhhccCCceEEe-cCCCCeE--EECCCCCHHHHHHHHHH
Confidence 2 24 5555566653 5889999877765432210 0111000001111 1244443 33556899887776654
Q ss_pred ccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC-------
Q 011437 304 QAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH------- 350 (485)
Q Consensus 304 QAE----Hdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~------- 350 (485)
-+= .--.|...++.. ++.. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 282 ~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~g 359 (484)
T 3ifg_A 282 SKYRNNGQTCVCTNRFFVH-ERVY-DAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTG 359 (484)
T ss_dssp HHHGGGGCSTTCCCEEEEE-GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHhcCCCcccCCCeEEEc-HHHH-HHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 221 122333333333 3353 7777777777766530 1223333211
Q ss_pred -------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhccccc
Q 011437 351 -------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAG 392 (485)
Q Consensus 351 -------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I~nAG 392 (485)
| .|+-++|+|||++++|..--=| ..|.++|.. .+..+++ +|
T Consensus 360 G~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~-aG 438 (484)
T 3ifg_A 360 GKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALE-YG 438 (484)
T ss_dssp CSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCC-CS
T ss_pred CCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-cc
Confidence 1 2445789999999999843222 456777764 5677776 89
Q ss_pred eeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011437 393 SVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 393 sIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~ 439 (485)
.|++..+.. .++-+|- +|..|..+..+++.|+..-++.
T Consensus 439 ~v~iN~~~~---------~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~ 481 (484)
T 3ifg_A 439 MVGINTGLI---------SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLC 481 (484)
T ss_dssp EEEESCSCC---------CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEE
T ss_pred eEEEcCCCC---------CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEE
Confidence 999996421 1234554 4567888888999998776653
No 22
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=96.54 E-value=0.48 Score=48.86 Aligned_cols=326 Identities=11% Similarity=0.099 Sum_probs=176.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHH-------HHHHHHHHHHHHHHHHhc
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAV-------KEAFDVAYNNIYAFHLAQ 144 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~-------~~Ai~~A~~nI~~Fh~~Q 144 (485)
...+-.+..+.+-+.++++-|+=..-.++...+-.. ..+.+.. ..-++.++++++.|....
T Consensus 34 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~------------~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~ 101 (427)
T 1o20_A 34 TTREKNKAIKKIAEKLDERRKEILEANRIDVEKARE------------RGVKESLVDRLALNDKRIDEMIKACETVIGLK 101 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccc------------ccccHHHHHHHhcCHHHHHHHHHHHHHHHhcc
Confidence 444555666777777777776644444444432100 0011111 124677888888887633
Q ss_pred cCCCceEE--e-cCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHH
Q 011437 145 KSAETSVE--N-MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAK 219 (485)
Q Consensus 145 ~~~~~~~~--~-~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~ 219 (485)
.+...... . .+|...-.++.|+.-|++..| +| |...+...+||-.||+.=|+= |.. ..| .+.-++
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p---~p-~~~~~~~~~~ALaaGNtVVlK--ps~----~tp~t~~~l~~ 171 (427)
T 1o20_A 102 DPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE---SR-PNVTVETTILALKSGNTILLR--GGS----DALNSNKAIVS 171 (427)
T ss_dssp CCTTCEEEEEECTTSCEEEEEEEECCCEEEECC---SC-THHHHHHHHHHHHTTCCEEEE--CCG----GGHHHHHHHHH
T ss_pred cccCccccccccCCCceeEEEeecceeEEEEec---CC-hHHHHHHHHHHHHcCCEEEEE--CCH----hHHHHHHHHHH
Confidence 22221111 1 236556678899999999998 35 677788889999999865543 432 334 222223
Q ss_pred H-------cCCc-chhh--cc-hHHHHH-HHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEE
Q 011437 220 K-------AGVT-HILK--AG-GAQAIS-AMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 287 (485)
Q Consensus 220 l-------~Gv~-eIy~--vG-GAQAIA-AlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~VgID~~AGPSEvlII 287 (485)
+ +|+. .++. .| |...++ +|. .-|+||+|.=-|..-| .|++.....-.|.. -+-|-|= +|
T Consensus 172 l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~----~~~~v~~I~fTGS~~~--G~~i~~~a~~~v~l-ELGGk~p--~i 242 (427)
T 1o20_A 172 AIREALKETEIPESSVEFIENTDRSLVLEMIR----LREYLSLVIPRGGYGL--ISFVRDNATVPVLE-TGVGNCH--IF 242 (427)
T ss_dssp HHHHHHTTSSSCGGGEEECCCCCTHHHHHHTT----CTTTCSEEEECSCHHH--HHHHHHHCSSCBCC-CCCCCEE--EE
T ss_pred HHHHHHHHcCCCcccEEEecCCChHHHHHHHh----CCCCccEEEeCCChHH--HHHHHHhcCCCEEE-ecCCCce--EE
Confidence 2 4654 3333 24 333333 332 3478999996666433 23222110001221 1335554 44
Q ss_pred ecCCCCHHHHHHhhhhccCc---CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----HH----H----H---HHhhc
Q 011437 288 ADIYASPVHIAADLLSQAEH---GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----GE----F----A---SKALG 349 (485)
Q Consensus 288 AD~sAnP~~vAaDLLaQAEH---dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----~~----i----a---~~sl~ 349 (485)
-|++||.+..|..++.-+=. .-.|...++.. ++.. ++..+.+.+.++.+.- .+ + . ...+.
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~~~~gg~~~~~~~Ptl~~~~~~i~~ 320 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPGTCNAAEKLLVH-EKIA-KEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWP 320 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTTSTTSEEEEEEE-HHHH-HHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTT
T ss_pred EeCCCCHHHHHHHHHHHhccCCCCCCCccEEEEe-hhhH-HHHHHHHHHHHHHcCCeeecChhhhhhCCcccCCCcchhh
Confidence 45668988866555432211 22333333332 2343 6666666655555431 00 0 0 01121
Q ss_pred ---CC---eEEEeCCHHHHHHHhhhhc-cccccccccChHh---HHhhccccceeccCCCCCccccccccCCCCCCCCCC
Q 011437 350 ---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG 419 (485)
Q Consensus 350 ---~g---~ii~v~sl~eai~~~N~~A-PEHLel~~~~p~~---~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G 419 (485)
.| .++-++|+|||++++|..- +--..+.++|... ++.++ .+|.|++..++.. ++-+|-+|
T Consensus 321 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~V~iN~~~~~---------~~~~pfGg 390 (427)
T 1o20_A 321 TEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEI-DAAAVYVNASTRF---------TDGGQFGF 390 (427)
T ss_dssp CCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCGGG---------CSTTTTTC
T ss_pred cccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhC-CccEEEECCCCcc---------CCCCCCCC
Confidence 24 4567899999999999852 2235677888754 55665 6899999975431 23355543
Q ss_pred cc---------ccccCCcccccceeeeEEE
Q 011437 420 YA---------RMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 420 ~A---------R~~sgLsV~~FlK~~s~~~ 440 (485)
.. |..+..+++.|+..-++..
T Consensus 391 ~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~ 420 (427)
T 1o20_A 391 GAEIGISTQRFHARGPVGLRELTTYKFVVL 420 (427)
T ss_dssp SCCSCEECSSSSCCEECCTGGGEEEEEEEE
T ss_pred cccccccCCcccCCChHHHHHHhceEEEEE
Confidence 32 2345567888888777654
No 23
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=96.53 E-value=0.38 Score=50.38 Aligned_cols=338 Identities=12% Similarity=0.102 Sum_probs=171.0
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc
Q 011437 71 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVEN-VSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET 149 (485)
Q Consensus 71 ~~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~-~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~ 149 (485)
....+-.+..+.+-+.++++.|+=..-.++...+-.-..+.-+ ..|+.. -..+.++.++++++++.+...+...
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~-----~~~~~~~~~a~~~~~~~~~~~~~g~ 107 (468)
T 1vlu_A 33 ISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDL-----FKGDKFEVMLQGIKDVAELEDPVGK 107 (468)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCT-----TSTTHHHHHHHHHHHHHHSCCSSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhh-----hhHHHHHHHHHHHHHHhhcCCCCCe
Confidence 3444555666677777777776654444444422100000000 011111 0223467788888888765443221
Q ss_pred eEE---ecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH----HHHHHH---
Q 011437 150 SVE---NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK----VLYCAK--- 219 (485)
Q Consensus 150 ~~~---~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p----iLaAA~--- 219 (485)
... ..+|...-.++.|+.-|++..|.- |...++-.+||-.||+. ||+-|.. ..| .|+-+-
T Consensus 108 ~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN----P~~~~~~~~~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~~a 177 (468)
T 1vlu_A 108 VKMARELDDGLTLYQVTAPVGVLLVIFESR----PEVIANITALSIKSGNA--AILKGGK----ESVNTFREMAKIVNDT 177 (468)
T ss_dssp EEEEEEEETTEEEEEEEEECCEEEEEESSC----THHHHHHHHHHHHHTCE--EEEECCG----GGHHHHHHHHHHHHHH
T ss_pred ecccccCCCCceeEEEecCcceEEEEeccC----hHHHHHHHHHHHHcCCE--EEEEcCC----ccHHHHHHHHHHHHHH
Confidence 111 124666678899999999999963 57778889999999975 4444542 233 222222
Q ss_pred --H----cCCc----chhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEec
Q 011437 220 --K----AGVT----HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIAD 289 (485)
Q Consensus 220 --l----~Gv~----eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~VgID~~AGPSEvlIIAD 289 (485)
. +|+. .+.. +|...-.+|. .-|.||+|.=-|..=| .|++.....-.| +=-+-|-+ -+|-|
T Consensus 178 L~e~~~~aGlP~gvv~vv~-~~~~~g~~L~----~~p~vd~I~fTGS~~~--g~~i~~~a~kpv-~lElGGk~--p~iV~ 247 (468)
T 1vlu_A 178 IAQFQSETGVPVGSVQLIE-TRQDVSDLLD----QDEYIDLVVPRGSNAL--VRKIKDTTKIPV-LGHADGIC--SIYLD 247 (468)
T ss_dssp HHHHHHHHCCCTTSEEECC-CC--CGGGGG----CTTTCCEEEEESCHHH--HHHHHHTCCSCB-TTBCSCCE--EEEEC
T ss_pred HHhhchhcCCCCCcEEEEC-CHHHHHHHHh----hCCCcCEEEEECCHHH--HHHHHHhcCCCE-EeecCCcc--ceEEC
Confidence 4 6654 3334 6543222232 3488999965555322 233221100001 11123433 35556
Q ss_pred CCCCHHHHHHhhhhccCcCCC---Cc-eEEEecC-chhhHHHHHHHHHHHHh---cCCC-HHH-HHHh------------
Q 011437 290 IYASPVHIAADLLSQAEHGPD---SQ-VVLVIVG-DGVDLDAIEQEISKQCQ---SLPR-GEF-ASKA------------ 347 (485)
Q Consensus 290 ~sAnP~~vAaDLLaQAEHdp~---a~-aiLvT~s-~~la~~~V~~ei~~ql~---~l~r-~~i-a~~s------------ 347 (485)
++||.+..|-.++.-+=.... |. -+||-.+ +++. +++.+++.+.-- .-|. ... ++.+
T Consensus 248 ~dADl~~Aa~~i~~~~~~n~G~C~a~~rvlV~~~id~f~-~~l~~~~~~~~v~~~Gdp~~~~~~i~~a~~~~~gG~g~~P 326 (468)
T 1vlu_A 248 EDADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWW-EVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQC 326 (468)
T ss_dssp TTCCHHHHHHHHHHTTCC----CCCCEEEEECTTSTTHH-HHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHT
T ss_pred CCCCHHHHHHHHHHHhcCCCCcCCcCcEEEEECCHHHHH-HHHHHHHHhcCCeecCCHHHhcccccccceeeccCCCCCC
Confidence 679999888776655444332 22 2444333 3442 555555543321 1111 122 2222
Q ss_pred ----------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhccccceeccCCCCCcccccc
Q 011437 348 ----------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDY 407 (485)
Q Consensus 348 ----------l~---~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY 407 (485)
+. .| .++.++|+|||++++|..--=| ..|.++|.. .+..++ .+|.|++..++....+=-
T Consensus 327 tvlv~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~V~vN~~~~~~~~~p 405 (468)
T 1vlu_A 327 KTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGV-DSSGVYWNASTRFADGFR 405 (468)
T ss_dssp TBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHC-CCSEEEESSCGGGCC---
T ss_pred ceeeCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhC-CeeEEEEcCCCCCCCCCC
Confidence 11 13 5677999999999999963322 456777865 456666 479999997553210000
Q ss_pred cc-----CCCCCCCCCCccccccCCcccccceeeeEEE
Q 011437 408 AS-----GTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 408 ~a-----GpNHvLPT~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
+. |. -++|..|. |..+++.|+..-++..
T Consensus 406 fG~Gg~~G~----~~SG~g~~-G~~gl~~f~~~K~v~~ 438 (468)
T 1vlu_A 406 YGFGAEVGI----STSKIHAR-GPVGLDGLVSYQYQIR 438 (468)
T ss_dssp ------------------------CCSGGGEEEEEEEE
T ss_pred CCCCCCcce----ecCCCCCC-cchHHHHhcceEEEEE
Confidence 11 22 23556677 8889999998888764
No 24
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=96.50 E-value=0.82 Score=48.23 Aligned_cols=321 Identities=15% Similarity=0.146 Sum_probs=174.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--Cc
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA--ET 149 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~--~~ 149 (485)
...+-.+..+++-+.++++.|+=..-.++..-+- +.+..+.-+..+++.++.|...-..- ..
T Consensus 82 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~ 145 (498)
T 4f3x_A 82 TPAERSNALLKIADAIEKEADEFAALEALNCGKP----------------INAVKNDELPAIIDCWRFFAGAVRNLHAPA 145 (498)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HHHHhHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3344455566677777777766544444444321 01111223556667776665432211 11
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchHHHHHHHH---c---C
Q 011437 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKVLYCAKK---A---G 222 (485)
Q Consensus 150 ~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~piLaAA~l---~---G 222 (485)
.....+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+.= |+-|.. .-... .+.-+++ + |
T Consensus 146 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGNtV--VlKPs~-~tp~t-~~~l~~l~~ealP~g 218 (498)
T 4f3x_A 146 AGEYLPGHTSMIRRDPIGIVGSIAPW---NYPLMMMAWKLAPAIGGGNTV--VFKPSE-QTPLT-ALKLARLIADILPEG 218 (498)
T ss_dssp BEEEETTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEE--EEECCT-TCCHH-HHHHHHHHHTTSCTT
T ss_pred ccCCcccccceEEEcCcceEEEECCC---chHHHHHHHHHHHHHHcCCeE--EEECCc-ccHHH-HHHHHHHHHHhCCcC
Confidence 11123566777889999999999996 355 44556778999999754 444432 11122 2222222 1 3
Q ss_pred CcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011437 223 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 296 (485)
Q Consensus 223 v~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~ 296 (485)
+=.+..-.|...-.+|.- -|+||+|.=-|..=| ++|+.+. .|-.. +-|-+= +|-|++||.+.
T Consensus 219 v~nvv~g~~~~~g~~L~~----~p~v~~V~FTGS~~~G~~i~~~aa~~~k-----~v~lE-lGGk~p--~IV~~dADl~~ 286 (498)
T 4f3x_A 219 VVNVITGRGETVGNALIN----HPKVGMVSITGDIATGKKVLAAAAKTVK-----RTHLE-LGGKAP--VIVYGDADLEA 286 (498)
T ss_dssp SEEECCCCTTTHHHHHHT----CTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCEE--EEECTTSCHHH
T ss_pred eEEEEeCCchHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHHHhhCC-----ceeec-CCCCCc--EEECCCCCHHH
Confidence 333333235555556652 588999987775433 2222110 01111 124333 34466789998
Q ss_pred HHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC
Q 011437 297 IAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 350 (485)
Q Consensus 297 vAaDLLaQAEHd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~ 350 (485)
.|..++.-+=.. -.|...++.... .. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 287 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T 4f3x_A 287 VVNGIRTFGYYNAGQDCTAACRIYAEAG-IY-EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364 (498)
T ss_dssp HHHHHHHHTTGGGGCSTTCEEEEEEETT-TH-HHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCCccCCceEEecHH-HH-HHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence 777766533222 233333444332 43 7777777776665420 1122222211
Q ss_pred ---------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hH
Q 011437 351 ---------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KW 384 (485)
Q Consensus 351 ---------------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~ 384 (485)
| .|+-++|+|||++++|..--=+ ..|.++|.. .+
T Consensus 365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 444 (498)
T 4f3x_A 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA 444 (498)
T ss_dssp TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 1 2344789999999999843322 456777764 56
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEE
Q 011437 385 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 385 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~FlK~~s~~ 439 (485)
..++ .+|.|++..++... .-+|-+| ..|..|..+++.|+..-++.
T Consensus 445 a~~l-~aG~V~vN~~~~~~---------~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 445 ASRL-QYGCTWINTHFMLT---------NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp HHHC-CSSEEEESCCSCCC---------TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEE
T ss_pred HHhC-CcceEEEcCCCCCC---------CCCCcCCcCcCCcCccchHHHHHHhhceEEEE
Confidence 6777 59999999765422 3355554 45666667788888766653
No 25
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=96.48 E-value=1.1 Score=46.95 Aligned_cols=320 Identities=19% Similarity=0.141 Sum_probs=179.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE 152 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~-~~~~~ 152 (485)
.+-.+..+++.+.++++.|+=..-.++...+- ..+.+.-+..+++.++.|...-... .....
T Consensus 69 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~ 131 (481)
T 3jz4_A 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKP-----------------LAEAKGEISYAASFIEWFAEEGKRIYGDTIP 131 (481)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHGGGCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 34445566666677777666544444444321 1122334667777776665432211 11111
Q ss_pred -ecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hhh
Q 011437 153 -NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-ILK 228 (485)
Q Consensus 153 -~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy~ 228 (485)
..+|...-.++.|+.-|++..|.- +|+ ...+.-.+||-.||+.=| +-|.... .... +......+|+.+ ++.
T Consensus 132 ~~~~~~~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~~~ALaaGN~VV--lKps~~t-p~~~~~l~~l~~~aGlP~gvv~ 206 (481)
T 3jz4_A 132 GHQADKRLIVIKQPIGVTAAITPWN-FPA-AMITRKAGPALAAGCTMV--LKPASQT-PFSALALAELAIRAGVPAGVFN 206 (481)
T ss_dssp CSSTTEEEEEEEEECCEEEEECCSS-STT-HHHHHHHHHHHHHTCEEE--EECCTTS-CHHHHHHHHHHHHHTCCTTTEE
T ss_pred ccCCCceEEEEEcCccEEEEECCCc-chH-HHHHHHHHHHHHcCCEEE--EECCCCC-cHHHHHHHHHHHHhCcCCCeEE
Confidence 134666778899999999999963 332 345567789999996443 4443211 1222 334456677643 332
Q ss_pred c--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHH
Q 011437 229 A--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 299 (485)
Q Consensus 229 v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vAa 299 (485)
+ | |...-.+|.- -|+||+|.=-|..=|- +|+.+. .|-. -+-|-+= +|-|++||.+..|-
T Consensus 207 vv~g~~~~~g~~L~~----~p~v~~I~fTGS~~~g~~i~~~aa~~~~-----~v~l-ElGGk~p--~iV~~dADl~~Aa~ 274 (481)
T 3jz4_A 207 VVTGSAGAVGNELTS----NPLVRKLSFTGSTEIGRQLMEQCAKDIK-----KVSL-ELGGNAP--FIVFDDADLDKAVE 274 (481)
T ss_dssp ECCBCTHHHHHHHHH----CTTEEEEEEESCHHHHHHHHHHHTTTTC-----EEEE-ECCCCEE--EEECTTSCHHHHHH
T ss_pred EEeCCChHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHHhhcCC-----ceEE-ecCCCCe--EEEcCCCCHHHHHH
Confidence 2 3 5555555652 5889999877765432 221110 0111 1224433 44466799988777
Q ss_pred hhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhcC---
Q 011437 300 DLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH--- 350 (485)
Q Consensus 300 DLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~~--- 350 (485)
.++.-+=. --.|...++... +.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 275 ~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 352 (481)
T 3jz4_A 275 GALASKFRNAGQTCVCANRLYVQD-GVY-DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGAR 352 (481)
T ss_dssp HHHHHHHGGGGCSTTSEEEEEEEG-GGH-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCcccCCcEEEEeH-HHH-HHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCE
Confidence 66543222 223334444433 353 777777777777652 0 1122222111
Q ss_pred -----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhc
Q 011437 351 -----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESII 388 (485)
Q Consensus 351 -----------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I 388 (485)
| .++.++|+|||++++|..--=| ..|.++|.. .+.+++
T Consensus 353 v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 432 (481)
T 3jz4_A 353 VVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEAL 432 (481)
T ss_dssp EEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHC
T ss_pred EEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC
Confidence 2 2345789999999999854333 456777765 466666
Q ss_pred cccceeccCCCCCccccccccCCCCCCCCCCc-----cccccCCcccccceeeeEE
Q 011437 389 ENAGSVFLGEWTPESVGDYASGTNHVLPTYGY-----ARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 389 ~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G~-----AR~~sgLsV~~FlK~~s~~ 439 (485)
+ +|.|++..++. .++-+|-+|. .|..+..+++.|.+.-++.
T Consensus 433 ~-~G~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~ 478 (481)
T 3jz4_A 433 E-YGIVGINTGII---------SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMC 478 (481)
T ss_dssp C-CSEEEESCSCC---------CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred C-eeeEEECCCCC---------CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEE
Confidence 4 99999997543 1344676654 5556666778887766553
No 26
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=96.33 E-value=1.4 Score=46.81 Aligned_cols=321 Identities=17% Similarity=0.165 Sum_probs=180.3
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceE
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSV 151 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~-~~~~ 151 (485)
..+-.+..+++-+.++++.|+=..-.++...+- + .+.+.-+..+.+.++.|.+.-..- ....
T Consensus 84 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~l~~~a~~~~~~~~~~~ 146 (528)
T 3u4j_A 84 GAERSRLMFKVADLILARQEELALIESLEVGKP----------------I-AQARGEIGFCADLWSYAAGQARALEGQTH 146 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 344455667777777777776555555554421 1 111223556666666555432211 1111
Q ss_pred Eec-CceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-h
Q 011437 152 ENM-KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-I 226 (485)
Q Consensus 152 ~~~-~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-I 226 (485)
... +|...-.++.|+.-|++..|.- || ...+.-.+||-.||+.=| +-|.. .-.... +......+|+.. +
T Consensus 147 ~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~eaGlP~gv 220 (528)
T 3u4j_A 147 NNIGDDRLGLVLREPVGVVGIITPWN---FPFIIASERVPWAIGSGCTVV--LKPSE-FTSGTSIRLAELAREAGIPDGV 220 (528)
T ss_dssp CCSCTTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEE--EECCT-TCCHHHHHHHHHHHHHTCCTTS
T ss_pred ccCCCCceeEEEeccceEEEEECCCc---cHHHHHHHHHHHHHHcCCeEE--EEcCC-ccHHHHHHHHHHHHHhCCCCCe
Confidence 111 5677778899999999999974 55 344567789999997544 44432 112222 334456667642 3
Q ss_pred hh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 227 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 227 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
+. -| |...-.+|.- -|.||+|.=-|..=| ++|+.+- .|..-+ -|-+= +|-|++||.+..
T Consensus 221 v~vv~g~~~~~g~~L~~----~p~vd~I~FTGS~~~G~~i~~~aa~~lk-----~v~lEL-GGk~p--~iV~~dADl~~A 288 (528)
T 3u4j_A 221 FNVVTGYGDPAGQVLAE----DPNVDMVAFTGSVRVGTKLGEIAARTVK-----RVGLEL-GGKGP--QIVFADADLDAA 288 (528)
T ss_dssp EEECCCSSTTHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEEC-CCCEE--EEECTTSCHHHH
T ss_pred EEEEeCCcHHHHHHHHh----CCCcCEEEEeCCHHHHHHHHHHHHhcCC-----ceEEec-CCCCe--eEECCCCCHHHH
Confidence 22 23 5555555552 488999976665333 2222111 122222 25444 344667899988
Q ss_pred HHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC-
Q 011437 298 AADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH- 350 (485)
Q Consensus 298 AaDLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~- 350 (485)
|..++.-+=. --.|...|+... ++. ++..+.+.+.++.+.- .+.++.+.+.
T Consensus 289 a~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 366 (528)
T 3u4j_A 289 ADGIAYGVYHNAGQCCISGSRLLVQE-GIR-DALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSG 366 (528)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEG-GGH-HHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCCCCcCCCEEEEec-hHH-HHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCC
Confidence 7776643222 223333444433 343 6666666666554420 1122222111
Q ss_pred --------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHH
Q 011437 351 --------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWE 385 (485)
Q Consensus 351 --------------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l 385 (485)
| .|+.++|+|||++++|..--=| ..|.++|.. .++
T Consensus 367 a~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 446 (528)
T 3u4j_A 367 AELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTI 446 (528)
T ss_dssp CEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Confidence 2 2455789999999999853222 456777764 567
Q ss_pred hhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEEE
Q 011437 386 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 386 ~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~FlK~~s~~~ 440 (485)
.++ .+|.|++..++.. +.-+|=+| ..|..|..+++.|+..-++..
T Consensus 447 ~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 447 RRI-RAGRCWINSVIDG---------TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHS-CCSEEEESCCSCC---------CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEE
T ss_pred HhC-CeeEEEECCCCCC---------CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 777 5999999986421 23456554 567777888899988777543
No 27
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=96.22 E-value=0.8 Score=48.35 Aligned_cols=320 Identities=14% Similarity=0.088 Sum_probs=175.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC--ceE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE--TSV 151 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~--~~~ 151 (485)
.+-.+..+++-+.++++.|+=..-.++..-+- +.+....-+..+++.++.|... ..+. ..+
T Consensus 83 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~e~~~~ev~~~~~~~~~~a~~-~~~~~g~~~ 145 (501)
T 1bxs_A 83 SERGRLLNKLADLIERDRLLLATMEAMNGGKL----------------FSNAYLMDLGGCIKTLRYCAGW-ADKIQGRTI 145 (501)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----------------HHHHHHTHHHHHHHHHHHHHHH-GGGCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHHHH-HHHhhCCee
Confidence 34455667777777777776555555554321 0111122244555566555432 1110 011
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hh
Q 011437 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-IL 227 (485)
Q Consensus 152 ~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy 227 (485)
...+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+=|.. .-.... +......+|+.+ ++
T Consensus 146 ~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~~aGlP~gv~ 219 (501)
T 1bxs_A 146 PMDGNFFTYTRSEPVGVCGQIIPW---NFPLLMFLWKIGPALSCGNT--VVVKPAE-QTPLTALHMGSLIKEAGFPPGVV 219 (501)
T ss_dssp CCSSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TCCHHHHHHHHHHHHHTCCTTSE
T ss_pred eccCCcceeEEecCCceEEEECCC---cchHHHHHHHHHHHHHcCCe--eeccCCC-ccHHHHHHHHHHHHHhCCCcceE
Confidence 123466667889999999999997 366 4455678999999985 4444442 212223 344555666642 22
Q ss_pred h--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 228 K--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 228 ~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~A-Kr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
. -| |...-.+|. .-|.||+|.=-|..-| ++| +.+. .|... +-|-+= +|-|++||.+..
T Consensus 220 ~vv~g~~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~-----~v~lE-LGGk~p--~iV~~dADl~~A 287 (501)
T 1bxs_A 220 NIVPGYGPTAGAAIS----SHMDVDKVAFTGSTEVGKLIKEAAGKSNLK-----RVSLE-LGGKSP--CIVFADADLDNA 287 (501)
T ss_dssp EECCSCTTTHHHHHH----TCTTCSEEEEESCHHHHHHHHHHHHHTTCC-----EEEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEecCchHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhccCC-----cEEEe-cCCcCe--EEECCCCCHHHH
Confidence 2 24 655555554 2588999984444332 233 1111 01111 225553 344566899887
Q ss_pred HHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc--
Q 011437 298 AADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG-- 349 (485)
Q Consensus 298 AaDLLaQAEHd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~-- 349 (485)
|-.++.-+=.. -.|...++... +.. ++..+.+.+.++.+.- ...++.+.+
T Consensus 288 a~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 365 (501)
T 1bxs_A 288 VEFAHQGVFYHQGQCCIAASRLFVEE-SIY-DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEG 365 (501)
T ss_dssp HHHHHHHHHTTTTCCTTCCCEEEEEH-HHH-HHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCCCCCEEEEch-hHH-HHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 77766432211 22333333332 343 6666666666655420 011222110
Q ss_pred ------------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccccccccChH---hHHh
Q 011437 350 ------------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWES 386 (485)
Q Consensus 350 ------------------------------------~g---~ii~v~sl~eai~~~N~~AP-EHLel~~~~p~---~~l~ 386 (485)
.| .++.++|+|||++++|..-- --..|.++|.. .++.
T Consensus 366 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 445 (501)
T 1bxs_A 366 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSS 445 (501)
T ss_dssp CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHH
Confidence 01 24457899999999998532 22567777764 5667
Q ss_pred hccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEEE
Q 011437 387 IIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 387 ~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
+++ +|.|++..++.. + .-+|-+ |..|+.+..+++.|+..-++..
T Consensus 446 ~l~-aG~V~iN~~~~~-------~--~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~ 494 (501)
T 1bxs_A 446 ALQ-SGTVWVNCYSVV-------S--AQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTI 494 (501)
T ss_dssp HSC-CSEEEESCCCCC-------C--TTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred hcC-eeEEEECCCCCC-------C--CCCCCCCcCcCCcCccchHHHHHHhhCeeEEEE
Confidence 764 899999976431 1 124544 4556666677888988777643
No 28
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=96.20 E-value=0.54 Score=48.85 Aligned_cols=325 Identities=18% Similarity=0.153 Sum_probs=173.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-cCCCce
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ-KSAETS 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q-~~~~~~ 150 (485)
...+-.+..+++-+.++++-|+=..-.++...+-..+. +. .|+ ....+.++.++++++++...+ .+....
T Consensus 48 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~--~ev------~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 118 (457)
T 3lns_A 48 DVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV-DL--AEI------GAVLHEIDFALAHLDEWVAPVSVPSPDI 118 (457)
T ss_dssp SHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HH--HTH------HHHHHHHHHHHHHHHHHTSCEEECCCGG
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HH--HHH------HHHHHHHHHHHHHHHHhhcccccccccc
Confidence 34445566677777777777765555555554311000 00 011 123344556666666554322 111111
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHH---c---C
Q 011437 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKK---A---G 222 (485)
Q Consensus 151 ~~~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l---~---G 222 (485)
..|...-.++.|+.-|++..|.- +|+ ...++-++||-.||+. ||+-|.. ..| .+.-+++ + |
T Consensus 119 ---~~~~~~~~~~~P~GVv~~I~PwN-~P~-~~~~~~~~~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~~alP~g 187 (457)
T 3lns_A 119 ---IAPSECYVVQEPYGVTYIIGPFN-YPV-NLTLTPLIGAIIGGNT--CIIKPSE----TTPETSAVIEKIIAEAFAPE 187 (457)
T ss_dssp ---GCSCEEEEEEEECCEEEEECCSS-STT-HHHHHHHHHHHHTTCE--EEEECCT----TCHHHHHHHHHHHHHHCCTT
T ss_pred ---CCCcceEEEeecceEEEEECCCc-chH-HHHHHHHHHHHHcCCE--EEEECCC----CChHHHHHHHHHHHHhCCHh
Confidence 13455667899999999999963 333 4455567899999965 4444542 233 2222222 1 2
Q ss_pred CcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011437 223 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 296 (485)
Q Consensus 223 v~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~ 296 (485)
+=.+. -||.....+|. . |+||+|.=-|..=| ++|+.+. . |-. -+.|-+= +|-|++||.+.
T Consensus 188 vv~vv-~g~~~~~~~L~----~-~~vd~V~fTGS~~~G~~i~~~aa~~l~-p----v~l-ElGGk~p--~iV~~dADl~~ 253 (457)
T 3lns_A 188 YVAVI-QGGRDENSHLL----S-LPFDFIFFTGSPNVGKVVMQAAAKHLT-P----VVL-ELGGKCP--LIVLPDADLDQ 253 (457)
T ss_dssp TEEEC-CCCHHHHHHHT----T-SCCSEEEEESCHHHHHHHHHHHHTTTC-C----EEE-ECCCCEE--EEECTTCCHHH
T ss_pred hEEEe-cCCHHHHHHHh----c-CCCCEEEEECCHHHHHHHHHHHhhccC-c----eEE-ECCCCCC--CeECCCCCHHH
Confidence 22222 25666666775 2 68999976666543 2222211 0 111 1234333 44467799998
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcC-CC---------H-------HHHHH---------
Q 011437 297 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL-PR---------G-------EFASK--------- 346 (485)
Q Consensus 297 vAaDLLaQA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l-~r---------~-------~ia~~--------- 346 (485)
.|..++.-+ =.--.|...++... ++. +++.+.+.+.++.+ |. . +.++.
T Consensus 254 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~i~~a~~~~~~gg 331 (457)
T 3lns_A 254 TVNQLMFGKFINSGQTXIAPDYLYVHY-SVK-DALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGS 331 (457)
T ss_dssp HHHHHHHHHHGGGGCCTTSEEEEEEEG-GGH-HHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHHHHhCCCCccCCceEEEcH-HHH-HHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHhcCCeEEeCC
Confidence 777666322 22223433343333 243 55555555555433 10 0 01110
Q ss_pred ----------------------hhc---CC---eEEEeCCHHHHHHHhhhhcccc--ccccccChH---hHHhhccccce
Q 011437 347 ----------------------ALG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGS 393 (485)
Q Consensus 347 ----------------------sl~---~g---~ii~v~sl~eai~~~N~~APEH--Lel~~~~p~---~~l~~I~nAGs 393 (485)
.+. .| .++.++|+|||++++|.+.|-. ..|.++|.. .+..++ .+|.
T Consensus 332 ~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~ 410 (457)
T 3lns_A 332 QADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI-QSGD 410 (457)
T ss_dssp CEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTS-CCSE
T ss_pred ccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhC-Ccce
Confidence 111 13 3456899999999999944444 457788864 456666 4899
Q ss_pred eccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011437 394 VFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 394 IFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
|++..++.- ..+.-+|- +|..|..|..+++.|+..-++..
T Consensus 411 v~vN~~~~~-------~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 411 AQVNGVMLH-------AFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EEESCCSGG-------GGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred EEEcCCCCC-------CCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 999975321 11233454 45567777778888887776653
No 29
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=96.15 E-value=1.6 Score=45.98 Aligned_cols=321 Identities=14% Similarity=0.102 Sum_probs=170.5
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEEe-
Q 011437 75 SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVEN- 153 (485)
Q Consensus 75 ~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~~~- 153 (485)
+-.+..+++.+.++++.|+=..-.++...+- -.+.+.-+..+++.++.|...-.+..-....
T Consensus 73 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~ 135 (508)
T 3r64_A 73 ERSAIIYRAAELLEEHREEIVEWLIKESGST-----------------RSKANLEITLAGNITKESASFPGRVHGRISPS 135 (508)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHTSCCC-----------------HHHHHHHHHHHHHHHHHHTTSTTTCCEEEECC
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHhhhhcCccccc
Confidence 3344556666666666665444444433220 1122223667777777665432221112221
Q ss_pred -cCceEEEEEEEeceeeeEeecCCCCCcch-HhhhccccceecCCCeEEEEcCCCCCCCchH------HHHHHHHcCCc-
Q 011437 154 -MKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK------VLYCAKKAGVT- 224 (485)
Q Consensus 154 -~~Gv~lgqr~~PiervG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p------iLaAA~l~Gv~- 224 (485)
.+|...-.++.|+.-|++..|. -||- ..+.-.+||-.||+.= |+-|.. ..| +..+...+|+.
T Consensus 136 ~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~V--VlKps~----~tp~t~~~~l~~ll~~aGlP~ 206 (508)
T 3r64_A 136 NTPGKENRVYRVAKGVVGVISPW---NFPLNLSIRSVAPALAVGNAV--VIKPAS----DTPVTGGVIPARIFEEAGVPA 206 (508)
T ss_dssp SSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEE--EEECCT----TCHHHHTHHHHHHHHTTTCCT
T ss_pred CCCCceeEEEEecceEEEEECCC---cchHHHHHHHHHHHHhcCCEE--EEECCC----CChHHHHHHHHHHHHHhCcCc
Confidence 3467778889999999999996 3554 3445788999999654 444432 234 22344456654
Q ss_pred chh---hcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcC--CCCcccccCCCCCcEEEEEecCCCCHHHHH
Q 011437 225 HIL---KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQN--SEAMISIDMPAGPSEVLVIADIYASPVHIA 298 (485)
Q Consensus 225 eIy---~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~A-Kr~v~~--~~g~VgID~~AGPSEvlIIAD~sAnP~~vA 298 (485)
.++ .-+|...-.+|.- -|.||+|.=-|..=|-.+ .+..+. ..-.|-.. +-|-+= +|-|++||.+..|
T Consensus 207 gvv~vv~g~~~~~g~~L~~----~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lE-lGGk~p--~iV~~dADl~~Aa 279 (508)
T 3r64_A 207 GVISTVAGAGSEIGDHFVT----HAVPKLISFTGSTPVGRRVGELAINGGPMKTVALE-LGGNAP--FVVLADADIDAAA 279 (508)
T ss_dssp TTEEECCCCTTTTHHHHHH----CSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEE-CCCCCE--EEECTTSCHHHHH
T ss_pred CeEEEEeCCCHHHHHHHhh----CCCccEEEEECCHHHHHHHHHHhhcccCCCceEee-cCCcCc--eEECCCCCHHHHH
Confidence 222 2224555555543 478999987776544221 011110 00001111 124443 4446679998877
Q ss_pred Hhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC--
Q 011437 299 ADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH-- 350 (485)
Q Consensus 299 aDLLaQ----AEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~-- 350 (485)
-.++.- +=.--.|...++.. +++. ++..+.+.+.++.+.- ...++.+.+.
T Consensus 280 ~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga 357 (508)
T 3r64_A 280 QAAAVGAFLHQGQICMSINRVIVD-AAVH-DEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGA 357 (508)
T ss_dssp HHHHHHHHTSTTCTTTCCSEEEEE-HHHH-HHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhcCCCCcccCcEEEEe-hhHH-HHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCC
Confidence 666542 32223333344443 3353 7777777776665410 1222322211
Q ss_pred ---------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhccc
Q 011437 351 ---------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIEN 390 (485)
Q Consensus 351 ---------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I~n 390 (485)
| .++.++|+|||++++|..--=| ..|.++|.. .+..++ .
T Consensus 358 ~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~ 436 (508)
T 3r64_A 358 TVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQI-D 436 (508)
T ss_dssp EEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTS-C
T ss_pred EEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhC-C
Confidence 2 2345789999999999863222 557788864 566666 5
Q ss_pred cceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEE
Q 011437 391 AGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 391 AGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~FlK~~s~~ 439 (485)
+|.|++..++.. .+.-+| .+|+.|+.|..+++.|++.-++.
T Consensus 437 aG~V~vN~~~~~--------~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~ 482 (508)
T 3r64_A 437 SGMVHINDLTVN--------DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIG 482 (508)
T ss_dssp SSEEEECC----------------------------CCCHHHHHHHTEEEEEEE
T ss_pred cceEEEcCCCCC--------CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEE
Confidence 899999986532 112233 56777888888899998876654
No 30
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=96.13 E-value=1.7 Score=45.81 Aligned_cols=320 Identities=16% Similarity=0.140 Sum_probs=176.6
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~-~~~ 150 (485)
...+-.+..+++.+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++.|.+.-..- .-.
T Consensus 78 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---------------~-~ea~~ev~~~~~~~~~~a~~~~~~~g~~ 140 (503)
T 1a4s_A 78 AGIERSRVMLEAARIIRERRDNIAKLEVINNGK-T---------------I-TEAEYDIDAAWQCIEYYAGLAPTLSGQH 140 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-C---------------H-HHHHHHHHHHHHHHHHHHHHGGGCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 344556667777777777777655544554421 1 0 011223556666666665432211 111
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-h
Q 011437 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-I 226 (485)
Q Consensus 151 ~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-I 226 (485)
+...+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+-|.. .-.... +......+|..+ +
T Consensus 141 ~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~ta~~l~~l~~~aGlP~gv 214 (503)
T 1a4s_A 141 IQLPGGAFAYTRREPLGVCAGILAW---NYPFMIAAWKCAPALACGNA--VVFKPSP-MTPVTGVILAEIFHEAGVPVGL 214 (503)
T ss_dssp EECGGGCEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHTTCCTTS
T ss_pred ccCCCCceeEEEEecCceEEEECCC---cchHHHHHHHHHHHHHcCCE--EEEECCC-CChHHHHHHHHHHHHhCCCcCe
Confidence 1222355566788999999999997 356 3445678999999985 4444542 212333 344555666542 2
Q ss_pred hh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 227 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 227 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
+. -| | ..-.+|. .-|.||+|.=-|..=| ++|+.+. .|-.. +-|-|= +|-|++||.+..
T Consensus 215 v~vv~g~~-~~g~~L~----~~p~v~~V~FTGS~~~G~~i~~~aa~~~~-----~v~lE-LGGk~p--~IV~~dADl~~A 281 (503)
T 1a4s_A 215 VNVVQGGA-ETGSLLC----HHPNVAKVSFTGSVPTGKKVMEMSAKTVK-----HVTLE-LGGKSP--LLIFKDCELENA 281 (503)
T ss_dssp EEECCCSH-HHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEEecCc-hHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHhhhcCC-----ceEEe-cCCcCe--EEECCCCCHHHH
Confidence 22 24 5 4444454 2478999954444322 2222111 01111 335554 444566899888
Q ss_pred HHhhhhccCcC----CCCc-eEEEecCchhhHHHHHHHHHHHHhcCCCH----------------------HHHHHh---
Q 011437 298 AADLLSQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPRG----------------------EFASKA--- 347 (485)
Q Consensus 298 AaDLLaQAEHd----p~a~-aiLvT~s~~la~~~V~~ei~~ql~~l~r~----------------------~ia~~s--- 347 (485)
|-.++.-+=.. -.|. -+||-.+ .. ++..+.+.+.++.+.-. ..++.+
T Consensus 282 a~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 282 VRGALMANFLTQGQVCTNGTRVFVQRE--IM-PQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHTTCGGGGCCTTCCCEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcCCcEEEEehH--HH-HHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 87776533222 2222 3444333 33 66666665555544200 011110
Q ss_pred --------------------------------------hc---CC---eEEEeCCHHHHHHHhhhhcc-ccccccccChH
Q 011437 348 --------------------------------------LG---HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE 382 (485)
Q Consensus 348 --------------------------------------l~---~g---~ii~v~sl~eai~~~N~~AP-EHLel~~~~p~ 382 (485)
+. .| .++-++|+|||++++|..-- --..|.++|..
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 10 12 34557899999999998532 22567787774
Q ss_pred ---hHHhhccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011437 383 ---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 383 ---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
.++.++ .+|.|++..++.. +..+|- +|..|..|..+++.|+..-++..
T Consensus 439 ~a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 494 (503)
T 1a4s_A 439 RAHRVAANL-EAGTCYINTYSIS---------PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHHHHS-CSSEEEESCCCCC---------CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred HHHHHHHHC-ceeEEEECCCCCC---------CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEE
Confidence 466777 5999999976541 122454 45667778888999988877653
No 31
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=96.08 E-value=1.5 Score=45.88 Aligned_cols=318 Identities=16% Similarity=0.119 Sum_probs=177.4
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc--eE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET--SV 151 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~--~~ 151 (485)
.+-.+..+++.+.++++-|+=..-.++..-+ . + .+.+.-+..+++.++.|... ..+.. ..
T Consensus 66 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---------------~-~ea~~ev~~~~~~l~~~a~~-~~~~~~~~~ 127 (479)
T 2imp_A 66 IERASWLRKISAGIRERASEISALIVEEGGK-I---------------Q-QLAEVEVAFTADYIDYMAEW-ARRYEGEII 127 (479)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-C---------------H-HHHHHHHHHHHHHHHHHHTT-TTTCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---------------H-HHHHHHHHHHHHHHHHHHHH-HHHhhCCcc
Confidence 3445556667777777766655545554421 0 0 11222366677777766542 22211 11
Q ss_pred Ee-cCceEEEEEEEeceeeeEeecCCCCCcchH-hhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-h
Q 011437 152 EN-MKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-I 226 (485)
Q Consensus 152 ~~-~~Gv~lgqr~~PiervG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-I 226 (485)
.. .+|...-.++.|+.-|++..|. -||-. .+.-.+||-.||+. |++-|.. .-.... +....+.+|... +
T Consensus 128 ~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~~aGlP~gv 201 (479)
T 2imp_A 128 QSDRPGENILLFKRALGVTTGILPW---NFPFFLIARKMAPALLTGNT--IVIKPSE-FTPNNAIAFAKIVDEIGLPRGV 201 (479)
T ss_dssp CCSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHHTCCTTS
T ss_pred ccCCCCceeEEEEeccceEEEECCC---chHHHHHHHHHHHHHHcCCE--EEEECCc-cchHHHHHHHHHHHHhCCCcCe
Confidence 11 2465667888999999999996 35543 44578899999984 3344442 212233 444556677653 2
Q ss_pred hh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 227 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 227 y~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
+. -| |.+.-.+|. +-|+||+|.=-|..-| ++|+.+. .|-.. +-|-|= +|-|++||.+..
T Consensus 202 v~vv~g~~~~~~~~L~----~~~~v~~V~fTGS~~~g~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~~a 269 (479)
T 2imp_A 202 FNLVLGRGETVGQELA----GNPKVAMVSMTGSVSAGEKIMATAAKNIT-----KVCLE-LGGKAP--AIVMDDADLELA 269 (479)
T ss_dssp EEECCSCTTTHHHHHH----HCTTEEEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEEECCcHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHHhccCC-----cEEEE-cCCcCe--EEECCCCCHHHH
Confidence 21 23 444334444 2488999985555433 2221110 12222 235553 444667899988
Q ss_pred HHhhhhccCcCC----CCc-eEEEecCchhhHHHHHHHHHHHHhcCC----C-------------------HHHHHHhh-
Q 011437 298 AADLLSQAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R-------------------GEFASKAL- 348 (485)
Q Consensus 298 AaDLLaQAEHdp----~a~-aiLvT~s~~la~~~V~~ei~~ql~~l~----r-------------------~~ia~~sl- 348 (485)
|-.++.-+=... .|. -++|-.+ .. ++..+.+.++++.+. . .+.++.+.
T Consensus 270 a~~i~~~~~~n~GQ~C~a~~rv~V~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 346 (479)
T 2imp_A 270 VKAIVDSRVINSGQVCNCAERVYVQKG--IY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVE 346 (479)
T ss_dssp HHHHHTTSSTTTTCCSSSCSEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCcCcCCcEEEEehh--hH-HHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 888775443332 222 3444333 43 666666666665542 0 01111111
Q ss_pred ----------------------------------c---CC---eEEEeCCHHHHHHHhhhhc-cccccccccChH---hH
Q 011437 349 ----------------------------------G---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KW 384 (485)
Q Consensus 349 ----------------------------------~---~g---~ii~v~sl~eai~~~N~~A-PEHLel~~~~p~---~~ 384 (485)
. .| .++.++|+|||++++|..- +--..|.++|.. .+
T Consensus 347 ~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~ 426 (479)
T 2imp_A 347 EGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKA 426 (479)
T ss_dssp TTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHH
T ss_pred CCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHH
Confidence 0 02 2445789999999999862 123567788865 46
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEEE
Q 011437 385 ESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 385 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
+.++ .+|.|++..++.. +.-+| .+|..|..|..+++.|+..-++..
T Consensus 427 ~~~l-~~G~v~iN~~~~~---------~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 427 IKGL-KFGETYINRENFE---------AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHC-CSSEEEESSCCCC---------CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHhC-CEeEEEECCCCCC---------CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 6776 5999999976532 12355 456677777778888988777654
No 32
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=96.05 E-value=0.34 Score=51.27 Aligned_cols=318 Identities=16% Similarity=0.110 Sum_probs=171.7
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE 152 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~-~~~~~ 152 (485)
.+-.+..+++-+.++++-|+=..-.++..-+ . + .+.+.-+..+++.++.|...-.+- ...+.
T Consensus 86 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---------------~-~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~ 148 (515)
T 2d4e_A 86 KERKRYLLRIAELIEKHADELAVMECLDAGQ-V---------------L-RIVRAQVARAAENFAFYAEYAEHAMEDRTF 148 (515)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-C---------------H-HHHHHHHHHHHHHHHHHHTTGGGTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3445556666666676666544444444421 1 0 011122556777777665422111 11112
Q ss_pred e-cCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc---
Q 011437 153 N-MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH--- 225 (485)
Q Consensus 153 ~-~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e--- 225 (485)
. .+|...-.++.|+.-|++..|. -|| ...+...+||-.||+.=|+ =|.. .-.... +......+|..+
T Consensus 149 ~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~eaGlP~gvv 222 (515)
T 2d4e_A 149 PVDRDWLYYTVRVPAGPVGIITPW---NAPLMLSTWRIAPALAFGNTVVL--KPAE-WSPFTATKLAEILKEADLPPGVF 222 (515)
T ss_dssp CBTTTEEEEEEEEECCCEEEECCS---SSHHHHHHHHHHHHHHTTCCEEE--ECCT-TSCHHHHHHHHHHHHTTCCTTSE
T ss_pred cCCCCceeEEEEecCCceEEECCC---CchhhhhhhhhhHHHHcCCeeee--cCCC-CcHHHHHHHHHHHHHhCCCcCeE
Confidence 1 3466667789999999999997 367 5566788899999985443 3432 212333 344555666542
Q ss_pred -hhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHH
Q 011437 226 -ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 298 (485)
Q Consensus 226 -Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vA 298 (485)
+..-+|...-.+|. .-|+||+|.=-|..=| ++|+.+. .|-.. +-|-+= +|-|++||.+..|
T Consensus 223 ~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G~~I~~~aa~~l~-----~v~lE-LGGk~p--~iV~~dADl~~Aa 290 (515)
T 2d4e_A 223 NLVQGFGEEAGAALV----AHPLVPLLTLTGETETGKIVMRNAADHLK-----RLSPE-LGGKSP--ALVFADADLERAL 290 (515)
T ss_dssp EECCCCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHGGGTC-----EEEEE-CCCCCE--EEECTTSCHHHHH
T ss_pred EEEeCCchHHHHHHH----hCCCcCEEEEeCcHHHHHHHHHHHhhcCC-----ceEec-CCCcCe--EEEcCCCCHHHHH
Confidence 22222443334443 2478999965555332 2221110 01111 234443 4445668998877
Q ss_pred HhhhhccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh---
Q 011437 299 ADLLSQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL--- 348 (485)
Q Consensus 299 aDLLaQAEH----dp~a~-aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl--- 348 (485)
..++.-+=. --.|. -+||-. +.. ++..+.+.+.++.+.- .+.++.+.
T Consensus 291 ~~i~~~~~~n~GQ~C~a~~rvlV~~--~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 367 (515)
T 2d4e_A 291 DAVVFQIFSFNGERCTASSRLLVEE--KIF-EDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREG 367 (515)
T ss_dssp HHHHHHHHGGGGCSTTCCCEEEEEH--HHH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCCCeEEEEeh--hHH-HHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCC
Confidence 776643221 22233 344432 243 5555555555544320 01111111
Q ss_pred ---------------------------------------c---CC---eEEEeCCHHHHHHHhhhhcccc-ccccccCh-
Q 011437 349 ---------------------------------------G---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDA- 381 (485)
Q Consensus 349 ---------------------------------------~---~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p- 381 (485)
. .| .|+.++|+|||++++|..--=| ..|.++|.
T Consensus 368 a~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 447 (515)
T 2d4e_A 368 ARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLE 447 (515)
T ss_dssp CEEEECCSBCCBCTTSCBCTTTTCBCCEEEECCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CEEEeCCccccccccccccCCCceeCCEEEeCCCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 0 12 3455789999999999853222 45667775
Q ss_pred --HhHHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011437 382 --EKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 382 --~~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~ 439 (485)
+.++.++ .+|.|++..++.. +.-+|-+ |..|..|..+++.|+..-++.
T Consensus 448 ~a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~ 502 (515)
T 2d4e_A 448 RAHRLALEL-EAGMVYLNSHNVR---------HLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA 502 (515)
T ss_dssp HHHHHHHHS-CSSEEEESSSCCC---------CTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEE
T ss_pred HHHHHHHhC-CeeEEEECCCCCC---------CCCCCCCCcCCCCCCccchHHHHHHhCceeEEE
Confidence 4566776 5999999976431 1224544 456666666788888766654
No 33
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=95.97 E-value=1.1 Score=46.95 Aligned_cols=325 Identities=15% Similarity=0.149 Sum_probs=174.8
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 011437 71 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 150 (485)
Q Consensus 71 ~~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~ 150 (485)
....+-.+..+++-+.++++.|+=..-.++..-+-..+. +. .| +. ...+-++.++++++.+...+.....
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~--~e-----v~-~~~~~~~~~~~~~~~~~~~~~~~~~- 106 (469)
T 3sza_A 37 RPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNA-YY--EE-----VV-YVLEEIEYMIQKLPEWAADEPVEKT- 106 (469)
T ss_dssp CSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HH--TT-----HH-HHHHHHHHHHHHHHHHHSCEECCCC-
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HH--HH-----HH-HHHHHHHHHHHHHHhhhcccccCcc-
Confidence 344455666777888888888876666666664311000 00 01 11 2344566777777777654322211
Q ss_pred EEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHc------
Q 011437 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKA------ 221 (485)
Q Consensus 151 ~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~------ 221 (485)
.. ..+...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+-|.. ..| .+.-++++
T Consensus 107 ~~-~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~--vVlKps~----~tp~t~~~l~~l~~~alP~ 176 (469)
T 3sza_A 107 PQ-TQQDELYIHSEPLGVVLVIGTW---NYPFNLTIQPMVGAIAAGNA--VVLKPSE----LSENMASLLATIIPQYLDK 176 (469)
T ss_dssp GG-GTTSEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEEECCT----TSHHHHHHHHHHHHHHSCT
T ss_pred cc-CCCccceeeccCCCEEEEECCC---cchHHHHHHHHHHHHHcCCE--EEEECCC----CChHHHHHHHHHHHHhCCc
Confidence 11 1233455678999999999997 355 4556677899999974 4444542 234 22222222
Q ss_pred CCcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH
Q 011437 222 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 295 (485)
Q Consensus 222 Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~ 295 (485)
|+=.|.. ||...+.+|.- .+||+|.=-|..=| ++|+.+. . |.. -+-|-|=+ |-|++||.+
T Consensus 177 gvv~vv~-g~~~~~~~ll~-----~~vd~I~FTGS~~vG~~i~~~aa~~lk-p----v~l-ELGGk~p~--iV~~dADl~ 242 (469)
T 3sza_A 177 DLYPVIN-GGVPETTELLK-----ERFDHILYTGSTGVGKIIMTAAAKHLT-P----VTL-ELGGKSPC--YVDKNCDLD 242 (469)
T ss_dssp TTSCBCC-CSHHHHHHHTT-----SCCSEEEEESCHHHHHHHHHHHHTTTC-C----EEE-ECCCCCEE--EECTTSCHH
T ss_pred ceEEEEE-CCHHHHHHHHh-----cCCCEEEEECCHHHHHHHHHHHhhccC-c----eEE-ecCCCCce--EECCCCCHH
Confidence 3323322 55555666541 26999977676432 2232211 0 111 12244433 345679998
Q ss_pred HHHHhhhhcc----CcCCCCce-EEEecCchhhHHHHHHHHHHHHhcC---CC-----------H---HHHHH-------
Q 011437 296 HIAADLLSQA----EHGPDSQV-VLVIVGDGVDLDAIEQEISKQCQSL---PR-----------G---EFASK------- 346 (485)
Q Consensus 296 ~vAaDLLaQA----EHdp~a~a-iLvT~s~~la~~~V~~ei~~ql~~l---~r-----------~---~ia~~------- 346 (485)
..|..++.-+ =.--.|.. +||-.+ .. +++.+.+.+.++.+ |. + +-+..
T Consensus 243 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i~ga~v 319 (469)
T 3sza_A 243 VACRRIAWGKFMNSGQTCVAPDYILCDPS--IQ-NQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKV 319 (469)
T ss_dssp HHHHHHHHHHHGGGGCCTTSCCEEEECGG--GH-HHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHhcCCCCCCCCcEEEEehh--HH-HHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHHcCCEE
Confidence 8776665322 11223333 444332 32 55555444444321 10 0 00000
Q ss_pred --------------------------hhc---CC---eEEEeCCHHHHHHHhhhhc-cccccccccChH---hHHhhccc
Q 011437 347 --------------------------ALG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESIIEN 390 (485)
Q Consensus 347 --------------------------sl~---~g---~ii~v~sl~eai~~~N~~A-PEHLel~~~~p~---~~l~~I~n 390 (485)
.+. .| .|+-++|+|||++++|..- +=-..|.++|.. .+..+++
T Consensus 320 ~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~- 398 (469)
T 3sza_A 320 AYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETS- 398 (469)
T ss_dssp EECCCEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCC-
T ss_pred EeCCccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCC-
Confidence 011 13 3456799999999999853 223567788864 4566664
Q ss_pred cceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011437 391 AGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 391 AGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
+|.|++..++.-. .+.-+|- +|..|+.|.-+++.|...-++..
T Consensus 399 ~G~V~vN~~~~~~-------~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~ 446 (469)
T 3sza_A 399 SGGVAANDVIVHI-------TLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLV 446 (469)
T ss_dssp CSEEEESCSSGGG-------SCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEE
T ss_pred cceEEEeCCCCCC-------CCCCCCcCCccccccCccchHHHHHHhhCeeEEEE
Confidence 8999999764211 1223343 45567777778888888777654
No 34
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=95.93 E-value=2.2 Score=45.31 Aligned_cols=321 Identities=16% Similarity=0.172 Sum_probs=179.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ce
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TS 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~-~~ 150 (485)
...+-.+..+++-+.++++.|+=..-.++...+- -.+.+.-+..+++.++.|...-.+-. ..
T Consensus 92 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~~~~~a~~~~~~~g~~ 154 (520)
T 3ed6_A 92 TAETRGKKVRAIADKIKEHREALARLETLDTGKT-----------------LEESYADMDDIHNVFMYFAGLADKDGGEM 154 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCee
Confidence 3344455667777777777776555455544321 11222236677777777665432211 11
Q ss_pred EEec-CceEEEEEEEeceeeeEeecCCCCCcch-HhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-
Q 011437 151 VENM-KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH- 225 (485)
Q Consensus 151 ~~~~-~Gv~lgqr~~PiervG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e- 225 (485)
.... +|...-.++.|+.-|++..|.- ||- ..+.-.+||-.||+. ||+-|.. .-.... +......+|+..
T Consensus 155 ~~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~apALaaGNt--VVlKPs~-~tp~t~~~l~~l~~eaGlP~g 228 (520)
T 3ed6_A 155 IDSPIPDTESKIVKEPVGVVTQITPWN---YPLLQASWKIAPALATGCS--LVMKPSE-ITPLTTIRVFELMEEVGFPKG 228 (520)
T ss_dssp ECCSSTTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHHTCE--EEEECCT-TCCHHHHHHHHHHHHHCCCTT
T ss_pred cccCCCCCcccccccCccEEEEECCCc---cHHHHHHHHHHHHHHcCCE--EEEEcCC-cchHHHHHHHHHHHHhCCCCC
Confidence 1111 4667778899999999999973 553 334567899999975 3444432 212233 334455666542
Q ss_pred ---hhhcchHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011437 226 ---ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 296 (485)
Q Consensus 226 ---Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~y------Vt~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~ 296 (485)
+..-.|...-.+|. +-|.||+|.=-|..= .++|+.+- .|...+ -|-+=++| +++||.+.
T Consensus 229 vvnvv~g~~~~~g~~L~----~~p~vd~V~FTGS~~vG~~i~~~aa~~l~-----~v~lEL-GGk~p~IV--~~dADl~~ 296 (520)
T 3ed6_A 229 TINLILGAGSEVGDVMS----GHKEVDLVSFTGGIETGKHIMKNAANNVT-----NIALEL-GGKNPNII--FDDADFEL 296 (520)
T ss_dssp SEEECCSCCTTHHHHHH----HCTTCSEEEEESCHHHHHHHHHHHHTTTC-----EEEEEC-CCCCEEEE--CTTSCHHH
T ss_pred eEEEEeCCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhcCC-----CEEEEc-CCCCeeEE--CCCCCHHH
Confidence 22222444444554 248899998666643 23332221 122221 24444433 33589998
Q ss_pred HHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC
Q 011437 297 IAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 350 (485)
Q Consensus 297 vAaDLLaQAEHd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~ 350 (485)
.|..++.-+=.. -.|...|+.. +++. +++.+.+.+.++.+.- ...++.+.+.
T Consensus 297 Aa~~i~~~~f~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 374 (520)
T 3ed6_A 297 AVDQALNGGYFHAGQVCSAGSRILVQ-NSIK-DKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAE 374 (520)
T ss_dssp HHHHHHHHHHGGGGTSTTCCCEEEEE-HHHH-HHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcccCceEEEc-HHHH-HHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhC
Confidence 777766433222 2233333333 3453 7777777777665420 1222332211
Q ss_pred ------------------------------------------C---eEEEeCCHHHHHHHhhhhccc-cccccccChH--
Q 011437 351 ------------------------------------------S---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE-- 382 (485)
Q Consensus 351 ------------------------------------------g---~ii~v~sl~eai~~~N~~APE-HLel~~~~p~-- 382 (485)
| .|+.++|+|||++++|..--= -..|.++|..
T Consensus 375 Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 454 (520)
T 3ed6_A 375 GATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKA 454 (520)
T ss_dssp TCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 2 245579999999999985322 2567788864
Q ss_pred -hHHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011437 383 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 383 -~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~ 439 (485)
.+..+++ +|.|++..+... +.-+|-+ |..|..|..+++.|+..-++.
T Consensus 455 ~~~a~~l~-aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 455 QRVANKLK-LGTVWINDFHPY---------FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHSC-CSEEEESCSCCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHCC-cceEEECCCCCC---------CCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 5677775 999999976432 1234544 456666777888888776654
No 35
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=95.93 E-value=2.1 Score=45.19 Aligned_cols=319 Identities=17% Similarity=0.106 Sum_probs=179.3
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE--E
Q 011437 75 SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV--E 152 (485)
Q Consensus 75 ~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~--~ 152 (485)
+-.+..+++-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|...-.+..... .
T Consensus 93 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~ 155 (504)
T 3ek1_A 93 ERAGILRKWFDLIIANADDIALIMTSEQGKP-----------------LAEARGEVLYAASFIEWFAEEAKRVYGDTIPA 155 (504)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 3345566666666666665444444433321 11222235666777766654332211111 1
Q ss_pred ecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hhhc
Q 011437 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-ILKA 229 (485)
Q Consensus 153 ~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy~v 229 (485)
..+|...-.++.|+.-|++..|.- +|+ ...+.-.+||-.||+.= |+-|.. .-.... +......+|+.. ++.+
T Consensus 156 ~~~~~~~~~~~~P~GVV~~I~PwN-~P~-~~~~~~~a~ALaaGN~V--VlKPs~-~tp~t~~~l~~l~~eaGlP~gv~~v 230 (504)
T 3ek1_A 156 PQNGQRLTVIRQPVGVTAAITPWN-FPA-AMITRKAAPALAAGCTM--IVRPAD-LTPLTALALGVLAEKAGIPAGVLQI 230 (504)
T ss_dssp SSTTEEEEEEEEECCEEEEECCSS-STT-HHHHHHHHHHHHHTCEE--EEECCT-TSCHHHHHHHHHHHHTTCCTTTEEE
T ss_pred ccccccceeeccCceEEEEECCCc-chH-HHHHHHHHHHHHcCCEE--EEECCC-cChHHHHHHHHHHHHhCCCcccEEE
Confidence 234666778899999999999963 333 34455678999999754 344442 212333 334556677653 3322
Q ss_pred --c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHh
Q 011437 230 --G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 300 (485)
Q Consensus 230 --G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vAaD 300 (485)
| |...-.+|.- -|+||+|.=-|..=|- +|+.+- .|-. =+-|-|= +|-|++||.+..|..
T Consensus 231 v~g~~~~~g~~L~~----~p~v~~V~FTGS~~~G~~i~~~aa~~lk-----~v~l-ELGGk~p--~IV~~dADl~~Aa~~ 298 (504)
T 3ek1_A 231 VTGKAREIGAELTS----NDTVRKLSFTGSTEVGRLLMAQCAPTIK-----RISL-ELGGNAP--FIVFDDADLDAAVDG 298 (504)
T ss_dssp CCSCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHGGGTC-----EEEE-ECCCCEE--EEECTTSCHHHHHHH
T ss_pred EeCCCHHHHHHHHh----CCCcCEEEEECCHHHHHHHHHhhhhhcC-----CeEe-cCCCCCe--eEEcCCCCHHHHHHH
Confidence 4 5555556653 5889999877765332 221110 0111 1124333 344667899887776
Q ss_pred hhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC----
Q 011437 301 LLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH---- 350 (485)
Q Consensus 301 LLaQA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~---- 350 (485)
++.-+ =.--.|...++.. ++.. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 299 i~~~~f~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v 376 (504)
T 3ek1_A 299 AMVSKYRNAGQTCVCANRIYVQ-RGVY-DKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKL 376 (504)
T ss_dssp HHHHHHGGGGCSTTSEEEEEEE-HHHH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhcCCCCCCCCCEEEEe-hhHH-HHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEE
Confidence 65422 1222344444443 3453 7777777777766520 1223333221
Q ss_pred --------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhcccc
Q 011437 351 --------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENA 391 (485)
Q Consensus 351 --------------------------------g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I~nA 391 (485)
| .++-++|+|||++++|..--=| ..|.++|.. .+..+++ +
T Consensus 377 ~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~-a 455 (504)
T 3ek1_A 377 ITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALE-Y 455 (504)
T ss_dssp EECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSC-C
T ss_pred EeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCC-c
Confidence 2 2345789999999999853222 456777765 4667774 9
Q ss_pred ceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011437 392 GSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 392 GsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~ 439 (485)
|.|++..++. .+.-+|=+ |..|..+..+++.|+..-++.
T Consensus 456 G~V~vN~~~~---------~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 499 (504)
T 3ek1_A 456 GMVGHNTGLI---------SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYIC 499 (504)
T ss_dssp SEEEESCSCC---------CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEE
T ss_pred CeEEECCCCC---------CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEE
Confidence 9999996541 12335544 456777788899998876654
No 36
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=95.84 E-value=2.4 Score=45.14 Aligned_cols=328 Identities=15% Similarity=0.098 Sum_probs=177.8
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCc
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAET 149 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~--Q~~~~~ 149 (485)
...+-.+..+++-+.++++.|+=..-.++..-+- + .+.+.-+..+++.++.|... ......
T Consensus 94 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~Ev~~~~~~l~~~a~~~~~~~~~~ 156 (538)
T 3qan_A 94 NPEERANILVKAAAIIRRRKHEFSAWLVHEAGKP----------------W-KEADADTAEAIDFLEYYARQMIELNRGK 156 (538)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 3445556677777777777776555555544321 0 11111245555556555443 111111
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-
Q 011437 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH- 225 (485)
Q Consensus 150 ~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e- 225 (485)
.....+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+.=| +-|.. .-.... +..++..+|+..
T Consensus 157 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VV--lKps~-~tp~ta~~l~~l~~eaGlP~g 230 (538)
T 3qan_A 157 EILSRPGEQNRYFYTPMGVTVTISPW---NFALAIMVGTAVAPIVTGNTVV--LKPAS-TTPVVAAKFVEVLEDAGLPKG 230 (538)
T ss_dssp CCCCCTTEEEEEEEEECCEEEEECCS---TTTTHHHHHHHHHHHHTTCEEE--EECCT-TSHHHHHHHHHHHHHTTCCTT
T ss_pred eecccCCcceeeecCCCcEEEEECCC---chHHHHHHHHHHHHHHcCCEEE--EECCC-ccHHHHHHHHHHHHHhCCCCC
Confidence 11222466777889999999999997 355 466677889999997543 44432 111112 223445566542
Q ss_pred hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHH-HhcCC------CCcccccCCCCCcEEEEEecCCCCHH
Q 011437 226 ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNS------EAMISIDMPAGPSEVLVIADIYASPV 295 (485)
Q Consensus 226 Iy~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr-~v~~~------~g~VgID~~AGPSEvlIIAD~sAnP~ 295 (485)
++.+ | |...-.+|. .-|.||+|.=-|..=|-..=. ..+.. --.| +==+-|-+= +|-|++||.+
T Consensus 231 vv~vv~g~~~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv-~lELGGk~p--~IV~~dADl~ 303 (538)
T 3qan_A 231 VINYVPGSGAEVGDYLV----DHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRV-IVEMGGKDT--VVVDRDADLD 303 (538)
T ss_dssp SEEECCBCTTTTHHHHH----HCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEE-EEECCCCCE--EEECTTSCHH
T ss_pred eEEEEecCCHHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhccccccccccE-EEecCCCCc--eEECCCCCHH
Confidence 2221 3 444444443 248899998666643321100 01100 0001 111234333 3445678999
Q ss_pred HHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhh-
Q 011437 296 HIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKAL- 348 (485)
Q Consensus 296 ~vAaDLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl- 348 (485)
..|..++.-+=. --.|...|+.... .. ++..+.+.+.++.+. . .+.++.+.
T Consensus 304 ~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 381 (538)
T 3qan_A 304 LAAESILVSAFGFSGQKCSAGSRAVIHKD-VY-DEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKK 381 (538)
T ss_dssp HHHHHHHHHHHGGGGCSTTCCCEEEEETT-TH-HHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccCceeEEehH-HH-HHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHH
Confidence 877776643222 2233333333332 43 777777777766552 0 11222221
Q ss_pred -----------------------------------c-CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHH
Q 011437 349 -----------------------------------G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWE 385 (485)
Q Consensus 349 -----------------------------------~-~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l 385 (485)
+ .| .|+-++|+|||++++|..--=| ..|.++|.. .+.
T Consensus 382 ~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 461 (538)
T 3qan_A 382 EGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAK 461 (538)
T ss_dssp HSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred CCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence 1 13 3455789999999999843222 567788864 566
Q ss_pred hhccccceeccC-CCCCccccccccCCCCCCCC-----CCcc-ccccCCcccccceeeeEEE
Q 011437 386 SIIENAGSVFLG-EWTPESVGDYASGTNHVLPT-----YGYA-RMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 386 ~~I~nAGsIFlG-~~tp~a~GDY~aGpNHvLPT-----~G~A-R~~sgLsV~~FlK~~s~~~ 440 (485)
.++ .+|.|++. .++.. .+.-+|= +|.. |..|..+++.|+..-++..
T Consensus 462 ~~l-~aG~V~iN~~~~~~--------~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~ 514 (538)
T 3qan_A 462 REF-HVGNLYFNRNCTGA--------IVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSE 514 (538)
T ss_dssp HHC-CCSEEEESSCSCCC--------CTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEE
T ss_pred HhC-CeeEEEEeCCCCCC--------CCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEE
Confidence 666 59999999 43321 1334554 4455 8888889999998777653
No 37
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=95.81 E-value=1 Score=47.49 Aligned_cols=327 Identities=20% Similarity=0.198 Sum_probs=182.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~ 151 (485)
...+-.+..+++-+.++++.|+=..-.++..-+-. .-...|+ ....+.++..++..++++..+.... .
T Consensus 70 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~ea~~ev------~~~~~~~~~~a~~~~~~~~~~~~~~-~- 137 (503)
T 3iwj_A 70 SGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPL----DEAAWDI------DDVAGCFEYYADLAEKLDARQKAPV-S- 137 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH----HHHHHHH------HHHHHHHHHHHHHHHHHHHHTTEEE-C-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH----HHHHHHH------HHHHHHHHHHHHHHHHhcCCccccc-c-
Confidence 33445566777778888888776665666554311 0000011 1344556666666666665442110 0
Q ss_pred EecCceEEEEEEEeceeeeEeecCCCCCcch-HhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hh
Q 011437 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-IL 227 (485)
Q Consensus 152 ~~~~Gv~lgqr~~PiervG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy 227 (485)
...++...-.++.|+.-|++..|.- ||- ..+.-.+||-.||+.=| +-|.. .-.... +......+|..+ ++
T Consensus 138 ~~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~~aGlP~gvv 211 (503)
T 3iwj_A 138 LPMDTFKSHVLREPIGVVGLITPWN---YPMLMATWKVAPALAAGCAAI--LKPSE-LASLTCLELGEICKEVGLPPGVL 211 (503)
T ss_dssp CSCTTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEE--EECCT-TSCHHHHHHHHHHHHHTCCTTSE
T ss_pred ccCCCccceEEEcCCceEEEECCCc---hHHHHHHHHHHHHHhcCCeEE--EECCC-cchHHHHHHHHHHHHhCcCcCeE
Confidence 0113556667889999999999973 553 34456789999996544 44432 112223 334455666642 22
Q ss_pred h--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHH
Q 011437 228 K--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 298 (485)
Q Consensus 228 ~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vA 298 (485)
. .| |...-.+|. .-|+||+|.=-|..=| ++|+.+- .|-. -+-|-|= +|-|++||.+..|
T Consensus 212 ~vv~g~~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~l~-----~v~l-ElGGk~p--~iV~~dADl~~Aa 279 (503)
T 3iwj_A 212 NILTGLGPEAGAPLA----THPDVDKVAFTGSSATGSKIMTAAAQLVK-----PVSL-ELGGKSP--LVVFEDVDLDKAA 279 (503)
T ss_dssp EECCSCHHHHTHHHH----TCTTCCEEEEESCHHHHHHHHHHHGGGTC-----CEEE-ECCCCEE--EEECSSSCHHHHH
T ss_pred EEEeCCcHHHHHHHh----hCCCccEEEEECcHHHHHHHHHHHhcCCC-----CEEE-ECCCCCc--eEEcCCCCHHHHH
Confidence 2 24 555555665 2578999976666432 2222111 0111 1224433 4446678998877
Q ss_pred HhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC--
Q 011437 299 ADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH-- 350 (485)
Q Consensus 299 aDLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~-- 350 (485)
..++.-+=. --.|...++.... +. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 280 ~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga 357 (503)
T 3iwj_A 280 EWAIFGCFWTNGQICSATSRLILHES-IA-TEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGA 357 (503)
T ss_dssp HHHHHHHTGGGGCCTTCEEEEEEETT-TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCcccCCeeEEcHH-HH-HHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCC
Confidence 666543222 2234344444332 43 6666666666655420 0122222111
Q ss_pred --------------------------------------C---eEEEeCCHHHHHHHhhhhcc-ccccccccChH---hHH
Q 011437 351 --------------------------------------S---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWE 385 (485)
Q Consensus 351 --------------------------------------g---~ii~v~sl~eai~~~N~~AP-EHLel~~~~p~---~~l 385 (485)
| .|+-++|+|||++++|..-- --..|.++|.. .++
T Consensus 358 ~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 437 (503)
T 3iwj_A 358 TILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVT 437 (503)
T ss_dssp EEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred EEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 2 23457899999999998532 22567788865 566
Q ss_pred hhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEEE
Q 011437 386 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 386 ~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~FlK~~s~~~ 440 (485)
.++ .+|.|++..+.. .++-+|-+| ..|+.+..+++.|+..-++..
T Consensus 438 ~~l-~aG~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~ 487 (503)
T 3iwj_A 438 KAF-KAGIVWVNCSQP---------CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487 (503)
T ss_dssp HHC-CSSEEEESSSCC---------CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HhC-CcceEEEcCCCC---------CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEE
Confidence 677 499999997532 134467555 456666677888887776553
No 38
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=95.81 E-value=0.59 Score=53.73 Aligned_cols=287 Identities=18% Similarity=0.173 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHHhccC---CCceEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEE
Q 011437 127 KEAFDVAYNNIYAFHLAQKS---AETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLA 202 (485)
Q Consensus 127 ~~Ai~~A~~nI~~Fh~~Q~~---~~~~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~ 202 (485)
+.-+..+++.++.|...-.+ .........|.....++.|+.-|++..|. -|| ...+..++||-.||+. ||+
T Consensus 608 ~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~Pw---NfPl~i~~~~va~ALAAGNt--VVl 682 (1001)
T 3haz_A 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPW---NFPLAIFLGQVTAALMAGNS--VVA 682 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCC---CChHHHHHHHHHHHHHcCCE--EEE
Confidence 34466677777766553221 11112233566777889999999999996 355 4556777899999964 445
Q ss_pred cCCCCCCCchH-----HHHHHHHcCCcc----hhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHH-HHhc-CC-C
Q 011437 203 TPPSQDGSICK-----VLYCAKKAGVTH----ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQ-NS-E 270 (485)
Q Consensus 203 TPP~~~G~i~p-----iLaAA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AK-r~v~-~~-~ 270 (485)
-|.. ..| +....+.+|+.+ +..-.|.. -.+|. +-|.||+|.=-|..=|..+= +... .. .
T Consensus 683 KPse----~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~----~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~ 753 (1001)
T 3haz_A 683 KPAE----QTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALT----AHPDIAGVVFTGSTEVARSINRALAAKDGP 753 (1001)
T ss_dssp ECCT----TCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHSSSC
T ss_pred ecch----hhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHH----hCCCcCEEEecCCHHHHHHHHHHHhcccCC
Confidence 5542 233 223344556542 22223444 44443 24889999888875543220 0111 00 0
Q ss_pred CcccccCCCCCcEEEEEecCCCCHHHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC-------
Q 011437 271 AMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP------- 339 (485)
Q Consensus 271 g~VgID~~AGPSEvlIIAD~sAnP~~vAaDLLaQAEHd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l~------- 339 (485)
..--+=-+-|-+= +|-|++||++.++.+++.-+=.. -.|...|+. .++.. +++.+.+...++.+.
T Consensus 754 l~pv~lElGGknp--~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV-~e~i~-d~f~~~L~~~~~~l~vGdp~d~ 829 (1001)
T 3haz_A 754 IVPLIAETGGINA--MIADATALPEQVADDVVTSAFRSAGQRCSALRLLFV-QEDVA-DRMIEMVAGAARELKIGDPSDV 829 (1001)
T ss_dssp CCCEEEECCCCEE--EEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEE-EHHHH-HHHHHHHHHHHHTCCBSCTTST
T ss_pred CceEEeecCCcce--EEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeec-cHHHH-HHHHHHHHHHHHhcCCCCcccc
Confidence 0001111234332 44588899999998887544332 234444444 34454 778777777776653
Q ss_pred --------C-------HHHHHHhh------------------------------c---CCe---EEEeCC--HHHHHHHh
Q 011437 340 --------R-------GEFASKAL------------------------------G---HSF---MVFARD--MLEGISFS 366 (485)
Q Consensus 340 --------r-------~~ia~~sl------------------------------~---~g~---ii~v~s--l~eai~~~ 366 (485)
. ...++.+. . .|- |+-+++ +|||++++
T Consensus 830 ~t~~Gpli~~~~~~rv~~~i~~a~~~g~v~gg~~~~~G~fv~PTvl~~~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~a 909 (1001)
T 3haz_A 830 ATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVLRAI 909 (1001)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHHSEEEEECCCCSSSCCCCEEEECSSGGGCCSCCCSSEEEEEEECGGGHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHhcCeEeccccCCCCcEEeeEEecCCCHHHHhccccCcEEEEEEeCCCCHHHHHHHH
Confidence 0 11222211 1 121 333564 89999999
Q ss_pred hhhcccc-ccccccChH---hHHhhccccceeccCCCCCccccccccCCCCCCCCC-----Ccccc-ccCCcccccceee
Q 011437 367 NLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARM-YGGVSLDSFLKYM 436 (485)
Q Consensus 367 N~~APEH-Lel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~-~sgLsV~~FlK~~ 436 (485)
|..--=| ..|+++|.. .+..++ .+|.|++..++.-.. ...+|-+ |+.+. -|..++..|+..-
T Consensus 910 N~t~yGLta~V~T~d~~~a~~~a~~l-~aG~V~VN~~~~~~~-------~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K 981 (1001)
T 3haz_A 910 ERTGYGLTLGVHSRIDDSIEAIIDRV-QVGNIYVNRNMIGAV-------VGVQPFGGNGLSGTGPKAGGPHYLARFATEQ 981 (1001)
T ss_dssp HHTCCCSEEEEECSCHHHHHHHHHHC-CCSEEEESSCSCCCC-------TTTSCBCCCGGGBCCCCBTSTTSGGGGEEEE
T ss_pred HcCCCCceEEEEcCCHHHHHHHHHhC-CeeeEEEeCCCcCCC-------CCCCCCCCcccCcCCCCCCCHHHHHHhceee
Confidence 9864433 677888875 455666 599999998653221 1223433 45533 3346778887766
Q ss_pred eEE
Q 011437 437 TVQ 439 (485)
Q Consensus 437 s~~ 439 (485)
++.
T Consensus 982 ~v~ 984 (1001)
T 3haz_A 982 TVT 984 (1001)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 39
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=95.67 E-value=0.77 Score=48.75 Aligned_cols=321 Identities=14% Similarity=0.155 Sum_probs=171.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cc
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENV-SELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ET 149 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~-~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~-~~ 149 (485)
...+-.+..+++-+.++++.|+=..-.++..-+- +.-.. .| +..+++.++.|...-..- .-
T Consensus 96 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~~E-------------v~~~~~~~~~~a~~~~~~~g~ 158 (517)
T 2o2p_A 96 NARDRGRLLYRLADVMEQHQEELATIEALDAGAV----YTLALKTH-------------VGMSIQTFRYFAGWCDKIQGA 158 (517)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHHTT-------------THHHHHHHHHHHHHGGGCCEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----HHHHHHHH-------------HHHHHHHHHHHHHHHHHhcCc
Confidence 3445566677777778888776555555555321 10000 11 334444555443321110 00
Q ss_pred eEEe----cCceEEEEEEEeceeeeEeecCCCCCcchH-hhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcC
Q 011437 150 SVEN----MKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAG 222 (485)
Q Consensus 150 ~~~~----~~Gv~lgqr~~PiervG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~G 222 (485)
.+.. .++...-.++.|+.-|++..|.- ||-. .+.-.+||-.||+.=| +=|.. .-.... +......+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGNtVV--lKps~-~tp~ta~~l~~l~~eaG 232 (517)
T 2o2p_A 159 TIPINQARPNRNLTLTKKEPVGVCGIVIPWN---YPLMMLSWKTAACLAAGNTVV--IKPAQ-VTPLTALKFAELTLKAG 232 (517)
T ss_dssp EECCCCCTTSCEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEE--EECCT-TCCHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceEEEEecCCccEEEECCCc---chHHHHHHHHHHHHHcCCEEE--EECCC-ccHHHHHHHHHHHHHhC
Confidence 1111 23435567789999999999974 5543 3457789999998644 43432 112333 444555666
Q ss_pred Ccc-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHH-HHHhcCCCCcccccCCCCCcEEEEEecCC
Q 011437 223 VTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAA-KMILQNSEAMISIDMPAGPSEVLVIADIY 291 (485)
Q Consensus 223 v~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~y------Vt~A-Kr~v~~~~g~VgID~~AGPSEvlIIAD~s 291 (485)
+.. ++. .| |...-.+|. .-|.||+|.=-|..= -++| +.+- .|... +-|-|=+ |-+++
T Consensus 233 lP~gvv~vv~g~g~~~g~~L~----~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk-----~v~lE-LGGk~p~--IV~~d 300 (517)
T 2o2p_A 233 IPKGVVNILPGSGSLVGQRLS----DHPDVRKIGFTGSTEVGKHIMKSCALSNVK-----KVSLE-LGGKSPL--IIFAD 300 (517)
T ss_dssp CCTTSEEECCSCHHHHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHTCC-----EEEEE-CCCCEEE--EECTT
T ss_pred CCcCeEEEEeCCCHHHHHHHH----hCCCCCEEEEECCHHHHHHHHHHhHHhcCC-----eEEEE-CCCcCeE--EECCC
Confidence 542 222 24 665555554 248899994333322 2333 2111 01111 2355543 44456
Q ss_pred CCHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHH
Q 011437 292 ASPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFAS 345 (485)
Q Consensus 292 AnP~~vAaDLLaQA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~ 345 (485)
||.+..|-.++.-+ =.--.|...++... +.. ++..+.+.+.++.+.- ...++
T Consensus 301 ADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~ 378 (517)
T 2o2p_A 301 CDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE-SIH-NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQ 378 (517)
T ss_dssp SCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEH-HHH-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeH-HHH-HHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHH
Confidence 89988777665422 12233334443332 243 6666666666654420 11222
Q ss_pred HhhcC--------------------------------------C---eEEEeCC--HHHHHHHhhhhc-cccccccccCh
Q 011437 346 KALGH--------------------------------------S---FMVFARD--MLEGISFSNLYA-PEHLIVNVKDA 381 (485)
Q Consensus 346 ~sl~~--------------------------------------g---~ii~v~s--l~eai~~~N~~A-PEHLel~~~~p 381 (485)
.+.+. | .++.++| +|||++++|..- +--..|.++|.
T Consensus 379 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 458 (517)
T 2o2p_A 379 RGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDI 458 (517)
T ss_dssp HHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBH
T ss_pred HHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCH
Confidence 22110 1 2445788 999999999842 12256677776
Q ss_pred H---hHHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011437 382 E---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 382 ~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~ 439 (485)
. .++.++ .+|.|++..+... +.-+|-+ |..|..|..+++.|+..-++.
T Consensus 459 ~~a~~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~ 514 (517)
T 2o2p_A 459 NKALYVSDKL-QAGTVFINTYNKT---------DVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514 (517)
T ss_dssp HHHHHHHHHC-CSSEEEESCSSCC---------CTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhc-CEeEEEECCCCCC---------CCCCCcCCcCcCCcCccChHHHHHHhCCceEEE
Confidence 4 566777 5999999975321 1235655 455665566678888776654
No 40
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=95.51 E-value=2.4 Score=44.71 Aligned_cols=317 Identities=15% Similarity=0.158 Sum_probs=163.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHhccCCCce
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVK-EAFDVAYNNIYAFHLAQKSAETS 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~-~Ai~~A~~nI~~Fh~~Q~~~~~~ 150 (485)
...+-.+..+++-+.++++.|+=..-.++..-+- + .+.+ .-+..+++.++.|.+......+.
T Consensus 83 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~-------------~~a~~~ev~~~~~~~~~~a~~~~~~~~~ 145 (497)
T 3i44_A 83 SPHERLGFVEKILEIYEKRSSDMAKTISMEMGAP----I-------------DMALNAQTATGSSHIRNFIKAYKEFSFQ 145 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H-------------HHHHHTHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H-------------HHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 3444556667777777777776555555544321 0 1111 12344455555444332111122
Q ss_pred EEecCceEEEEE-EEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-
Q 011437 151 VENMKGVRCKRV-ARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH- 225 (485)
Q Consensus 151 ~~~~~Gv~lgqr-~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e- 225 (485)
....+|...-.+ +.|+.-|++..|. -|| ...+.-.+||-.||+. ||+-|.. .-.... +......+|+..
T Consensus 146 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~eaGlP~g 219 (497)
T 3i44_A 146 EALIEGNEQAILHYDAIGVVGLITPW---NWPMNQVTLKVIPALLAGCT--MVLKPSE-IAPLSAMLFAEILDEAALPSG 219 (497)
T ss_dssp EESSTTCSSCEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHHTCE--EEEECCT-TSCHHHHHHHHHHHHTTCCTT
T ss_pred ccccCCceeEEEeecCceEEEEECCC---cchHHHHHHHHHHHHHcCCE--EEEECCc-ccHHHHHHHHHHHHHhCcCCC
Confidence 111113322334 8999999999997 355 3445667899999976 4444442 212233 334456676542
Q ss_pred ---hhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011437 226 ---ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 296 (485)
Q Consensus 226 ---Iy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~ 296 (485)
+..-.|...-.+|.- -|.||+|.=-|..=| ++|+.+. .|-. -+-|-|=++| |++|| +.
T Consensus 220 vvnvv~g~~~~~g~~L~~----hp~v~~I~FTGS~~~G~~i~~~aa~~~k-----~v~l-ElGGk~p~IV--~~dAD-~~ 286 (497)
T 3i44_A 220 VFNLINGDGANVGSYLSA----HPDLEMISFTGSTRAGKDISKNASNTLK-----RVCL-ELGGKGANII--FADAD-ID 286 (497)
T ss_dssp SEEECCCCTTTHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEE-ECCCCCEEEE--CTTSC-TT
T ss_pred eEEEEeCCChHHHHHHHh----CCCcCEEEEeCcHHHHHHHHHHHhhcCC-----ceee-ccCCCCceEE--CCChh-HH
Confidence 222225555555542 488999987775433 2222111 0111 1234444433 44577 65
Q ss_pred HHHhhhhc----cCcCCCCce-EEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc
Q 011437 297 IAADLLSQ----AEHGPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG 349 (485)
Q Consensus 297 vAaDLLaQ----AEHdp~a~a-iLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~ 349 (485)
.|..++.- +=..-.|.. +||-. ++. ++..+.+.+.++.+.- .+.++.+.+
T Consensus 287 Aa~~i~~~~f~n~GQ~C~a~~rvlV~~--~i~-d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 363 (497)
T 3i44_A 287 ALQRGVRHCFYNSGQSCNAPTRMLVEQ--AIY-DKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGID 363 (497)
T ss_dssp HHHHHHHHHHGGGGCCTTCCCEEEEEG--GGH-HHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccCCEEEEcH--HHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 55444432 212223333 44432 233 5666655555544320 011221111
Q ss_pred -----------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH--
Q 011437 350 -----------------------------------------HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE-- 382 (485)
Q Consensus 350 -----------------------------------------~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~-- 382 (485)
.| .++.++|+|||++++|..--=| ..|.++|..
T Consensus 364 ~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 443 (497)
T 3i44_A 364 EGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKC 443 (497)
T ss_dssp TTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHH
T ss_pred CCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 12 3455789999999999843222 567788864
Q ss_pred -hHHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeE
Q 011437 383 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 438 (485)
Q Consensus 383 -~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~FlK~~s~ 438 (485)
.+..+++ +|.|++.. .. .+ .-+|-+| ..|..+..+++.|+..-++
T Consensus 444 ~~~a~~l~-aG~V~iN~-~~-------~~--~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v 494 (497)
T 3i44_A 444 RRIAAQVR-SGMVEVNG-HE-------LP--GGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494 (497)
T ss_dssp HHHHHHSC-CSEEEETT-CC-------CC--TTCCBCCSGGGCCCCBSHHHHHHTTEEEEEE
T ss_pred HHHHHhCC-cCeEEECC-CC-------CC--CCCCcCCcCcCcCCccchHHHHHHhcceeEE
Confidence 5667775 99999993 11 11 2256554 4566666677788766554
No 41
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=95.36 E-value=3.3 Score=43.46 Aligned_cols=327 Identities=14% Similarity=0.117 Sum_probs=177.1
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 152 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~~ 152 (485)
..+-.+..+++-+.++++.|+=..-.++..-+-. .+.+.-+..+++.++.|.+.-..-.-...
T Consensus 55 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~ 117 (486)
T 3pqa_A 55 ITKRYNILMNIAKQIKEKKEELAKILAIDAGKPI-----------------KQARVEVERSIGTFKLAAFYVKEHRDEVI 117 (486)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 3444556677777777777765555555554210 01111244445555544332111000111
Q ss_pred ecCceEEEEEEEeceeeeEeecCCCCCcch-HhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHc----CCcc
Q 011437 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKA----GVTH 225 (485)
Q Consensus 153 ~~~Gv~lgqr~~PiervG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~----Gv~e 225 (485)
..+|...-.++.|+.-|++..|. -||- ..+.-.+||-.||+.=|+ -|.. .-.... +......+ |+.+
T Consensus 118 ~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~~al~~~GlP~ 191 (486)
T 3pqa_A 118 PSDDRLIFTRREPVGIVGAITPF---NFPLNLSAHKIAPAIATGNVIVH--HPSS-KAPLVCIELAKIIENALKKYNVPL 191 (486)
T ss_dssp CCTTEEEEEEEEECSEEEEEECS---SSHHHHHHHHHHHHHHTTCEEEE--EECT-TSCHHHHHHHHHHHHHHHHTTCCG
T ss_pred cCCCceeEEEEccccEEEEECCC---chHHHHHHHHHHHHHHcCCEEEE--ECCC-CchHHHHHHHHHHHHHHHhcCCCC
Confidence 12356667789999999999996 3554 445667899999975443 3432 111222 22333444 7653
Q ss_pred -hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCcEEEEEecCCCCHHHHHHh
Q 011437 226 -ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYASPVHIAAD 300 (485)
Q Consensus 226 -Iy~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~-g~VgID~~AGPSEvlIIAD~sAnP~~vAaD 300 (485)
++.+ | |...-.+|. .-|+||+|.=-|..=|- |++..... -.|.. -+-|-+= +|-|++||.+..|-.
T Consensus 192 gvv~vv~g~~~~~g~~L~----~~p~vd~V~fTGS~~~g--~~i~~~aa~~~v~l-ELGGk~p--~iV~~dADl~~Aa~~ 262 (486)
T 3pqa_A 192 GVYNLLTGAGEVVGDEIV----VNEKVNMISFTGSSKVG--ELITKKAGFKKIAL-ELGGVNP--NIVLKDADLNKAVNA 262 (486)
T ss_dssp GGEEECCSCTTTHHHHHH----HCTTCCEEEEESCHHHH--HHHHHHCCSSEEEE-ECCCCEE--EEECTTSCHHHHHHH
T ss_pred CeEEEEeCCchHHHHHHH----hCCCccEEEEECChHHH--HHHHHHcCCCceee-ccCCcCc--EEEcCCCCHHHHHHH
Confidence 3322 3 443334443 24889999877775442 22211100 00111 1124443 344667999988777
Q ss_pred hhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcCC---
Q 011437 301 LLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGHS--- 351 (485)
Q Consensus 301 LLaQAEHd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~g--- 351 (485)
++.-+=.. -.|...++... ++. ++..+.+.+.++.+.- .+.++.+.+.|
T Consensus 263 i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 340 (486)
T 3pqa_A 263 LIKGSFIYAGQVCISVGMILVDE-SIA-DKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKL 340 (486)
T ss_dssp HHHHHHGGGGCSTTSEEEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhcCCCCccCCcEEEEeH-HHH-HHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 76533222 23334444433 353 7777777777765431 12333333222
Q ss_pred ----------------------------------eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhccccce
Q 011437 352 ----------------------------------FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGS 393 (485)
Q Consensus 352 ----------------------------------~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I~nAGs 393 (485)
.++.++| |||++++|..--=| ..|.++|.. .++.++ .+|.
T Consensus 341 ~~gG~~~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~ 418 (486)
T 3pqa_A 341 LLGGKRDKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENL-EFGG 418 (486)
T ss_dssp EECCCEETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHS-CSSE
T ss_pred EecCCCCCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC-Ccce
Confidence 1345678 99999999853222 566777764 566677 4899
Q ss_pred eccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEEEeCH
Q 011437 394 VFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQSLTE 443 (485)
Q Consensus 394 IFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~~~s~ 443 (485)
|++..++... ..-+|-+ |..|..|..+++.|+..-++..-..
T Consensus 419 v~vN~~~~~~--------~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 419 VVINDSSLFR--------QDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp EEESSCTTCC--------CTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred EEEeCCCCcC--------CCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 9999865411 1135544 4567777778889998877654433
No 42
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=95.13 E-value=0.63 Score=49.10 Aligned_cols=261 Identities=14% Similarity=0.137 Sum_probs=138.9
Q ss_pred EEEEEEeceeeeEeecCCCCCcchH-hhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHH-------HcCCcc-hh
Q 011437 159 CKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAK-------KAGVTH-IL 227 (485)
Q Consensus 159 lgqr~~PiervG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~-------l~Gv~e-Iy 227 (485)
...++.|+.-|++..|.- +|+-.+ +..-.+||-.||+.=|+ =|.. ..| .+..++ .+|+.. ++
T Consensus 130 ~~~~~~P~GVv~~I~PwN-~P~~~~~~~~~~~~ALaaGN~VVl--Kps~----~tp~t~~~l~~l~~~al~~aGlP~gvv 202 (510)
T 1ez0_A 130 IRRQQIALGPVAVFGASN-FPLAFSAAGGDTASALAAGCPVIV--KGHT----AHPGTSQIVAECIEQALKQEQLPQAIF 202 (510)
T ss_dssp EEEEEEECSCEEEECCSS-CTTTTSTTSHHHHHHHHHTCCEEE--ECCT----TCHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ceEEEecCcEEEEECCcc-chhhhhhhHHHHHHHHHcCCEEEE--ECCC----CchHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 356789999999999963 444433 34678999999986444 3432 233 222222 357642 33
Q ss_pred hc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH--H
Q 011437 228 KA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV--H 296 (485)
Q Consensus 228 ~v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~--~ 296 (485)
.+ | |...-.+|.= -|.||+|.=-|..=| ++|+++-.. .|... +-|-|=++| |++||.+ .
T Consensus 203 ~vv~g~~~~~g~~L~~----~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~---pv~lE-LGGk~p~iV--~~dADl~~~~ 272 (510)
T 1ez0_A 203 TLLQGNQRALGQALVS----HPEIKAVGFTGSVGGGRALFNLAHERPEPI---PFYGE-LGAINPTFI--FPSAMRAKAD 272 (510)
T ss_dssp EEECCSCTHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHHSSSCC---CEEEE-CCCCCEEEE--CHHHHHHCTT
T ss_pred EEEeCCcHHHHHHHHc----CCCCCEEEEeCcHHHHHHHHHHhhccCCCc---cEEEE-CCCCCeEEE--eCCCCccHHH
Confidence 32 4 5554455542 478999984454322 223221000 02111 235554444 4446777 5
Q ss_pred HHHhhhhccCc----CCCCce-EEEecCchhhHHHHHHHHHHHHhcCC-----C-------HHHHHHhh-----------
Q 011437 297 IAADLLSQAEH----GPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLP-----R-------GEFASKAL----------- 348 (485)
Q Consensus 297 vAaDLLaQAEH----dp~a~a-iLvT~s~~la~~~V~~ei~~ql~~l~-----r-------~~ia~~sl----------- 348 (485)
.|-.++.-+=. --.|.. ++|-.+ ... ++..+.+.+.++.+. . .+.++.++
T Consensus 273 aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-~i~-d~f~~~l~~~~~~~~~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg 350 (510)
T 1ez0_A 273 LADQFVASMTMGCGQFCTKPGVVFALNT-PET-QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQ 350 (510)
T ss_dssp HHHHHHHHHTGGGGCCTTCCCEEEEESS-HHH-HHHHHHHHHHHHHCCCBCCSSHHHHHHHHHHHHHHHTSTTEEEEECC
T ss_pred HHHHHHHHHHcCCCCCcCCCCEEEEeCC-ccH-HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 55554433322 223333 444444 232 555555555544432 0 01111122
Q ss_pred ------------------------c---CC---eEEEeCCHHHHHHHhhhhccccc--cccccCh-----HhHHhhcc-c
Q 011437 349 ------------------------G---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDA-----EKWESIIE-N 390 (485)
Q Consensus 349 ------------------------~---~g---~ii~v~sl~eai~~~N~~APEHL--el~~~~p-----~~~l~~I~-n 390 (485)
. .| .++.++|+|||++++|.. +-.| .|.++|. +.++.+++ .
T Consensus 351 ~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~-~~gLaa~v~t~d~~~~~a~~~~~~l~~~ 429 (510)
T 1ez0_A 351 AESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML-AGSLTATIHATEEDYPQVSQLIPRLEEI 429 (510)
T ss_dssp CCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC-CCEEEEEEECCGGGHHHHHHHHHHHHTT
T ss_pred CCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC-CCCeEEEEEccCcCHHHHHHHHHHHhhc
Confidence 1 12 234578999999999996 3444 5677764 45777775 8
Q ss_pred cceeccCCCCCcc-ccccccCCCCCCC--CCCcccc--ccCCcccccceeeeEEEeC
Q 011437 391 AGSVFLGEWTPES-VGDYASGTNHVLP--TYGYARM--YGGVSLDSFLKYMTVQSLT 442 (485)
Q Consensus 391 AGsIFlG~~tp~a-~GDY~aGpNHvLP--T~G~AR~--~sgLsV~~FlK~~s~~~~s 442 (485)
+|.|++..++... +.+ +..|-.| -+|..|. .|..+++.|++..+++...
T Consensus 430 aG~V~iN~~~~~~~~~~---~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~~~~ 483 (510)
T 1ez0_A 430 AGRLVFNGWPTGVEVGY---AMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALP 483 (510)
T ss_dssp EEEEEESSCSSCCCCSS---SCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEESCC
T ss_pred ccEEEECCCCccCccCC---CCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEcCCc
Confidence 9999999754211 111 1222222 1233332 4567899999988888753
No 43
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=94.91 E-value=3 Score=48.09 Aligned_cols=263 Identities=16% Similarity=0.154 Sum_probs=148.5
Q ss_pred cCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hhh-
Q 011437 154 MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-ILK- 228 (485)
Q Consensus 154 ~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy~- 228 (485)
.+|...-.+++|+.-|++..|.- || ...+..++||-.||+. ||+=|.. .-.... +....+.+|+.. ++.
T Consensus 655 ~~g~~~~~~~~PlGVV~~I~PwN---fPl~i~~~~~a~ALaaGNt--VVlKPse-~tplsa~~l~ell~eAGlP~gvvnv 728 (1026)
T 4f9i_A 655 APGELNHYFYEPKGVAAVIAPWN---FPLAISMGMASAAIVTGNC--VVFKPSG-ITSIIGWHLVELFREAGLPEGVFNF 728 (1026)
T ss_dssp CTTEEEEEEEEECSEEEEECCSS---STTHHHHHHHHHHHHTTCE--EEEECCG-GGHHHHHHHHHHHHHTTCCTTSEEE
T ss_pred CCCccceeEeecCceEEEeCCCc---cHHHHHHHHHHHHHHcCCE--EEEEcCc-cchHHHHHHHHHHHHhCcCCCeEEE
Confidence 45766778899999999999963 54 4455677899999954 4555542 111112 334456677653 332
Q ss_pred -cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcC--C------CCcccccCCCCCcEEEEEecCCCCHHHHH
Q 011437 229 -AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN--S------EAMISIDMPAGPSEVLVIADIYASPVHIA 298 (485)
Q Consensus 229 -vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~--~------~g~VgID~~AGPSEvlIIAD~sAnP~~vA 298 (485)
-| |...-.+|.= -|.||+|.=-|..=|. |++... . +..--+==+-|-+ -+|.|++||++.+|
T Consensus 729 V~G~g~~vg~~L~~----hp~v~~V~FTGSt~vg--~~I~~~aa~~~~~~~~lkpv~lElGGkn--p~IV~~dADld~Aa 800 (1026)
T 4f9i_A 729 TPGRGSVMGDYLVD----HPDISLIAFTGSMETG--LRIIERAAKVHPGQANVKKIISEMGGKN--AIIIDDDADLDEAV 800 (1026)
T ss_dssp CCCCHHHHHHHHHH----CTTEEEEEEESCHHHH--HHHHHHHTSCCTTCCSCCEEEEECCCCE--EEEECTTCCHHHHH
T ss_pred EecCcHHHHHHHHh----CCCCCEEEeCCCHHHH--HHHHHHhhcccccccCccceEEecCCCC--eEEECCCCCHHHHH
Confidence 24 5554455542 5889999777765442 221110 0 0000000111222 35668889999999
Q ss_pred HhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh-----
Q 011437 299 ADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA----- 347 (485)
Q Consensus 299 aDLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s----- 347 (485)
.+++.-+=. --.|...|+... ++. +++.+.+.+.++.+.- ...++.+
T Consensus 801 ~~iv~saf~~aGQ~C~A~~rl~V~~-~i~-d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~ 878 (1026)
T 4f9i_A 801 PHVLYSAFGFQGQKCSACSRVIVLD-AVY-DKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGH 878 (1026)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEG-GGH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSE
T ss_pred HHHHHHHHhCCCCCCCCCceEEecH-HHH-HHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCe
Confidence 988754322 223444444443 353 7777777766665520 0111111
Q ss_pred -----------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhc
Q 011437 348 -----------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESII 388 (485)
Q Consensus 348 -----------------------------l~---~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I 388 (485)
+. .| .|+.++|+|||++++|..--=| ..|.+.|.. .+.+++
T Consensus 879 ~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l 958 (1026)
T 4f9i_A 879 VLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREF 958 (1026)
T ss_dssp EEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHS
T ss_pred EEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhC
Confidence 11 13 3456789999999999853222 457777764 456666
Q ss_pred cccceeccCCCCCccccccccCCCCCCCCCC-----cccc-ccCCcccccceeeeEEE
Q 011437 389 ENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARM-YGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 389 ~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~-~sgLsV~~FlK~~s~~~ 440 (485)
+ +|.|++...+.-+. ...+|=+| +.+. -|..++..|+..-++..
T Consensus 959 ~-aG~v~IN~~~~~~~-------~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~ 1008 (1026)
T 4f9i_A 959 R-VGNLYINRNNTGAL-------VERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTE 1008 (1026)
T ss_dssp C-CSEEEESSCSCCCC-------TTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEE
T ss_pred C-EeeEEEcCCCCCCC-------CCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEE
Confidence 5 99999998644322 12345444 4433 33456788887766543
No 44
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=94.86 E-value=4.7 Score=42.54 Aligned_cols=325 Identities=16% Similarity=0.149 Sum_probs=173.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCc
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAET 149 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~--Q~~~~~ 149 (485)
...+-.+..+++-+.++++.|+=..-.++..-+- +. +.+.-+..+++.++.|.+. +.....
T Consensus 94 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~~~~~a~~~~~~~~~~ 156 (516)
T 1uzb_A 94 PQEDRSRLLLKAAALMRRRKRELEATLVYEVGKN----------------WV-EASADVAEAIDFIEYYARAALRYRYPA 156 (516)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHHGGGCSSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3445566677777778888776555555554321 00 1111255556666555331 111111
Q ss_pred -eEEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc
Q 011437 150 -SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH 225 (485)
Q Consensus 150 -~~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e 225 (485)
.....+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+=|.. .-.... +......+|...
T Consensus 157 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~ta~~l~~l~~eaGlP~ 230 (516)
T 1uzb_A 157 VEVVPYPGEDNESFYVPLGAGVVIAPW---NFPVAIFTGMIVGPVAVGNT--VIAKPAE-DAVVVGAKVFEIFHEAGFPP 230 (516)
T ss_dssp CCCCCCTTEEEEEEEEECCEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEEECCG-GGHHHHHHHHHHHHHHTCCT
T ss_pred ccccCCCCceEEEEEeccceEEEECCC---ccHHHHHHHHHHHHHHcCCe--EEEeCCC-CCHHHHHHHHHHHHHhCCCc
Confidence 11123466667789999999999997 366 5556678899999976 4444542 111122 334445566643
Q ss_pred -hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcC--------CCC-cccccCCCCCcEEEEEecCCC
Q 011437 226 -ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN--------SEA-MISIDMPAGPSEVLVIADIYA 292 (485)
Q Consensus 226 -Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~--------~~g-~VgID~~AGPSEvlIIAD~sA 292 (485)
++. -| |...-.+|. .-|.||+|.=-|..=| .|++... ... .|.. -+-|-|= +|-|++|
T Consensus 231 gvv~vv~g~~~~~~~~L~----~~~~v~~I~FTGS~~~--G~~i~~~aa~~~~~~~~~~~v~l-ElGGk~p--~iV~~dA 301 (516)
T 1uzb_A 231 GVVNFLPGVGEEVGAYLV----EHPRIRFINFTGSLEV--GLKIYEAAGRLAPGQTWFKRAYV-ETGGKNA--IIVDETA 301 (516)
T ss_dssp TSEEECCCSSSHHHHHHH----TCTTCCEEEEESCHHH--HHHHHHHHTSCCTTCCSCCEEEE-ECCCCEE--EEECTTS
T ss_pred CeEEEEeCCCchhhhhhh----cCCCcCEEEecCCHHH--HHHHHHHhhhccccccccceeEE-ecCCccc--eeECCCC
Confidence 221 24 555455554 2488999986666332 2222110 000 0111 1234443 3446678
Q ss_pred CHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------------HHHHHHh
Q 011437 293 SPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEFASKA 347 (485)
Q Consensus 293 nP~~vAaDLLaQA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r---------------------~~ia~~s 347 (485)
|.+..|..++.-+ =.--.|...++... +.. ++..+.+.+.++.+.- .+.++.+
T Consensus 302 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a 379 (516)
T 1uzb_A 302 DFDLAAEGVVVSAYGFQGQKCSAASRLILTQ-GAY-EPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIG 379 (516)
T ss_dssp CHHHHHHHHHHHHHGGGGCSTTCEEEEEEEH-HHH-HHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCccccCcEEEEch-HHH-HHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHH
Confidence 9988777665422 12223334443333 243 6666666666654420 0011111
Q ss_pred ----------------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc--ccccccChHh--
Q 011437 348 ----------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK-- 383 (485)
Q Consensus 348 ----------------------------------l~---~g---~ii~v~sl~eai~~~N~~APEH--Lel~~~~p~~-- 383 (485)
+. .| .|+.++|+|||++++|.. +-. ..|.++|...
T Consensus 380 ~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~-~~gL~a~v~t~d~~~a~ 458 (516)
T 1uzb_A 380 KNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT-PYGLTGGVYSRKREHLE 458 (516)
T ss_dssp TTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCS-SCCSEEEEECSCHHHHH
T ss_pred HHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcC-CCCceEEEECCCHHHHH
Confidence 10 12 345578999999999997 333 5677888754
Q ss_pred -HHhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCC-cccccceeeeEE
Q 011437 384 -WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGV-SLDSFLKYMTVQ 439 (485)
Q Consensus 384 -~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgL-sV~~FlK~~s~~ 439 (485)
+..++ .+|.|++..++... .++-+|=+ |..|..+|. +++.|+..-++.
T Consensus 459 ~~~~~l-~aG~v~iN~~~~~~-------~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~ 513 (516)
T 1uzb_A 459 WARREF-HVGNLYFNRKITGA-------LVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHS-CCSEEEESSCSCCC-------CTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHhC-CEeEEEEeCCCCCC-------CCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEE
Confidence 56666 79999999743221 12335544 445433333 356777766653
No 45
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=94.79 E-value=4.2 Score=42.87 Aligned_cols=319 Identities=17% Similarity=0.145 Sum_probs=174.0
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceEE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSVE 152 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~-~~~~~~ 152 (485)
.+-.+..+++-+.++++.|+=..-.++..-+ ++.- + ..+-+..+++.++.|...-.. ......
T Consensus 66 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk----~~~e-------a-----~~~~v~~~~~~~~~~a~~~~~~~~~~~~ 129 (490)
T 2wme_A 66 MQRSRILRRAVDILRERNDELAALETLDTGK----PLAE-------T-----RSVDIVTGADVLEYYAGLVPAIEGEQIP 129 (490)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC----CHHH-------H-----TTTHHHHHHHHHHHHHHHGGGCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC----CHHH-------H-----HHHHHHHHHHHHHHHHhccccccCcccc
Confidence 3445556667777777777544444443321 1100 0 011244555666655442221 122333
Q ss_pred ecCceEEEEEEEeceeeeEeecCCCCCcchH-hhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hhh
Q 011437 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-ILK 228 (485)
Q Consensus 153 ~~~Gv~lgqr~~PiervG~YVPGG~a~ypSt-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy~ 228 (485)
..++...-.++.|+.-|++..|. -||-. .+.-.+||-.||+. ||+=|.. .-.... +......+|+.+ ++.
T Consensus 130 ~~~~~~~~~~~~P~GVv~~I~Pw---NfP~~~~~~~~a~ALaaGNt--VVlKPse-~tp~ta~~l~~l~~eaGlP~gv~~ 203 (490)
T 2wme_A 130 LRETSFVYTRREPLGVVAGIGAW---NYPVQIALWKSAPALAAGNA--MIFKPSE-VTPLTALKLAEIYTEAGVPDGVFN 203 (490)
T ss_dssp EETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred ccCCcceeEEecceeEEEEeccc---cCcchhhhhhHHHHHHcCCe--EEEECCc-CCHHHHHHHHHHHHHhCCCCCcEE
Confidence 45566677788999999999996 36543 44567899999986 4444542 212222 334445667643 332
Q ss_pred c--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHH
Q 011437 229 A--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 299 (485)
Q Consensus 229 v--G-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vAa 299 (485)
+ | |.+.-.+|. .-|.||+|.=-|..=| .+|.+-+-. |..- +-|=+= +|-|++||.+..+.
T Consensus 204 vv~g~g~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~----v~lE-LGGk~p--~iV~~dAdl~~A~~ 272 (490)
T 2wme_A 204 VLTGSGREVGQWLT----EHPLIEKISFTGGTSTGKKVMASASSSSLKE----VTME-LGGKSP--LIIFPDADLDRAAD 272 (490)
T ss_dssp ECCSCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHHCCE----EEEE-CCCCCE--EEECTTSCHHHHHH
T ss_pred EEeCChHHHHHHHH----hCCCCCEEEEECChHHHHHHHHhhhccCCce----EEEE-cCCcCe--EEEccCccHHHHHH
Confidence 2 3 555545554 2588999975554322 122221100 1110 113332 44467899999887
Q ss_pred hhhhccCcCC----CCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc---
Q 011437 300 DLLSQAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG--- 349 (485)
Q Consensus 300 DLLaQAEHdp----~a~-aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~--- 349 (485)
.++.-+=... .|. -++|-. ++. +++.+.+.+.++.+.- ...++.+.+
T Consensus 273 ~~~~~~~~n~GQ~C~a~~rv~V~~--~i~-d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga 349 (490)
T 2wme_A 273 IAVMANFFSSGQVCTNGTRVFIHR--SQQ-ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKA 349 (490)
T ss_dssp HHHHHHHGGGGCCTTCCCEEEEEG--GGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccCCCcCCCceeeccch--hHH-HHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCC
Confidence 7764332211 222 344433 343 6677777666655420 011222211
Q ss_pred ---------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccccccccChH---h
Q 011437 350 ---------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---K 383 (485)
Q Consensus 350 ---------------------------------------~g---~ii~v~sl~eai~~~N~~A-PEHLel~~~~p~---~ 383 (485)
.| .|+.++|+|||++++|.-- +=-..|.++|.. .
T Consensus 350 ~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~ 429 (490)
T 2wme_A 350 RLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429 (490)
T ss_dssp EEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHH
T ss_pred EEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHH
Confidence 12 3455799999999999731 112567787764 5
Q ss_pred HHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeE
Q 011437 384 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 438 (485)
Q Consensus 384 ~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~FlK~~s~ 438 (485)
+..+++ +|.|++..+... +.-+|-+| ..|..|.-+++.|+..-++
T Consensus 430 ~~~~l~-aG~v~iN~~~~~---------~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v 479 (490)
T 2wme_A 430 AIHRLE-AGICWINTWGES---------PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479 (490)
T ss_dssp HHHHSC-CSEEEESCCSCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHCC-eeEEEEeCCCCC---------CCCCCcccccccccCchhHHHHHHHhhceeEE
Confidence 677775 899999854321 12367654 6777777888899876664
No 46
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=94.67 E-value=5.2 Score=42.08 Aligned_cols=321 Identities=17% Similarity=0.156 Sum_probs=175.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--Cc
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA--ET 149 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~--~~ 149 (485)
...+-.+..+++-+.++++-|+=..-.++..-+- +. .....-+..+++.++.|.+ ...+ .-
T Consensus 68 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~------------ea~~~Ev~~~~~~~~~~a~-~~~~~~g~ 130 (495)
T 3b4w_A 68 PPHERAAVIAAAVKMLAERKDLFTKLLAAETGQP----PT------------IIETMHWMGSMGAMNYFAG-AADKVTWT 130 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HH------------HHHHTTTHHHHHHHHHHHT-CGGGSCSE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----HH------------HHHHHHHHHHHHHHHHHHH-HHHHhcCC
Confidence 4455566777888888888877655555555321 10 0000113445555555543 2211 11
Q ss_pred eEEecCceEEEEEEEeceeeeEeecCCCCCcch-HhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-
Q 011437 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH- 225 (485)
Q Consensus 150 ~~~~~~Gv~lgqr~~PiervG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e- 225 (485)
.+....+...-.++.|+.-|++..|.- ||- ..+.-.+||-.||+.=|+ =|.. .-.... +......+|..+
T Consensus 131 ~~~~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~eaGlP~g 204 (495)
T 3b4w_A 131 ETRTGSYGQSIVSREPVGVVGAIVAWN---VPLFLAVNKIAPALLAGCTIVL--KPAA-ETPLTANALAEVFAEVGLPEG 204 (495)
T ss_dssp EEEEETTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEE--ECBT-TSCHHHHHHHHHHHHTTCCTT
T ss_pred cccCCCCceEEEEEccCceEEEECCCc---chHHHHHHHHHHHHHcCCEEEE--ecCC-ccHHHHHHHHHHHHHhCCCcC
Confidence 122223545667889999999999974 564 344577899999985444 3432 112233 334455666642
Q ss_pred hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH
Q 011437 226 ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 297 (485)
Q Consensus 226 Iy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~v 297 (485)
++. -||...-.+|. .-|+||+|.=-|..=| ++|+.+. .|-.. +-|-|= +|-|++||.+..
T Consensus 205 vv~vv~g~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~l~-----pv~lE-LGGk~p--~iV~~dADl~~A 272 (495)
T 3b4w_A 205 VLSVVPGGIETGQALT----SNPDIDMFTFTGSSAVGREVGRRAAEMLK-----PCTLE-LGGKSA--AIILEDVDLAAA 272 (495)
T ss_dssp SEEECCBSHHHHHHHT----TCTTCCEEEEESCHHHHHHHHHHHHHTTC-----CEEEE-CCCCEE--EEECTTCCHHHH
T ss_pred eEEEEeCCHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHhhhcCC-----ceeec-CCCcce--EEECCCCCHHHH
Confidence 222 26776666665 2589999984444332 2222211 02111 224443 444667899887
Q ss_pred HHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh----
Q 011437 298 AADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA---- 347 (485)
Q Consensus 298 AaDLLaQA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s---- 347 (485)
|-.++.-+ =.--.|...++.... .. +++.+.+.+.++.+.- .+.++.+
T Consensus 273 a~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 350 (495)
T 3b4w_A 273 IPMMVFSGVMNAGQGCVNQTRILAPRS-RY-DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEG 350 (495)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEGG-GH-HHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCCCCCCCeEEEEccc-HH-HHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 77665422 122234344443332 32 5555555555544310 0111111
Q ss_pred ---------------------------------hc---CC---eEEEeCCHHHHHHHhhhhccc-cccccccChH---hH
Q 011437 348 ---------------------------------LG---HS---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---KW 384 (485)
Q Consensus 348 ---------------------------------l~---~g---~ii~v~sl~eai~~~N~~APE-HLel~~~~p~---~~ 384 (485)
+. .| .++.++|+|||++++|..--= -..|.++|.. .+
T Consensus 351 a~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 430 (495)
T 3b4w_A 351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKI 430 (495)
T ss_dssp CEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHH
T ss_pred CEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHH
Confidence 10 12 345578999999999985322 2567788864 56
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEEE
Q 011437 385 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 385 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
+.++ .+|.|++..++ . +.-+|- +|..|..|..+++.|+..-++..
T Consensus 431 ~~~l-~aG~V~iN~~~--~--------~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~ 480 (495)
T 3b4w_A 431 SQQI-RTGTYGINWYA--F--------DPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480 (495)
T ss_dssp HHHS-CCSCCEESSCC--C--------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEC
T ss_pred HHhC-CEeEEEECCCC--C--------CCCCCCCCCCCCCcCccchHHHHHHhcceeEEEE
Confidence 6776 59999999753 1 122454 45566666677888987777643
No 47
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=94.56 E-value=5.5 Score=41.93 Aligned_cols=325 Identities=14% Similarity=0.095 Sum_probs=174.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceEE
Q 011437 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSVE 152 (485)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~-~~~~~~ 152 (485)
.+-.+..+++-+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++.|.+.-.+ ....+.
T Consensus 77 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---------------~-~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~ 139 (501)
T 1uxt_A 77 TERLAVLRKAADIIERNLDVFAEVLVMNAGK-P---------------K-SAAVGEVKAAVDRLRLAELDLKKIGGDYIP 139 (501)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-C---------------H-HHHHHHHHHHHHHHHTGGGGGGGTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC-C---------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3445556677777777777655545554421 1 0 11112256677777766543211 111122
Q ss_pred e---cC--ceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc
Q 011437 153 N---MK--GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH 225 (485)
Q Consensus 153 ~---~~--Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e 225 (485)
. .+ +...-.++.|+.-|++..|. .+|+ ...+...+||-.||+.=| +=|.. .-.... +......+|...
T Consensus 140 ~~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~eaGlP~ 214 (501)
T 1uxt_A 140 GDWTYDTLETEGLVRREPLGVVAAITPF-NYPL-FDAVNKITYSFIYGNAVV--VKPSI-SDPLPAAMAVKALLDAGFPP 214 (501)
T ss_dssp STTSSTTTTEEEEEEEEECSEEEEECCT-TSTT-HHHHHHHHHHHHTTCEEE--EECCT-TSCHHHHHHHHHHHHTTCCT
T ss_pred ccccCCCcCceEEEEEeeccEEEEECCC-ccHH-HHHHHHHHHHHHcCCEEE--EeCCC-CchHHHHHHHHHHHHhCCCc
Confidence 2 22 44566788999999999997 3333 555678899999997544 44432 112233 444556677642
Q ss_pred -hhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCC-CCcccccCCCCCcEEEEEecCCCCHHHHHHhh
Q 011437 226 -ILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS-EAMISIDMPAGPSEVLVIADIYASPVHIAADL 301 (485)
Q Consensus 226 -Iy~v--GGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~-~g~VgID~~AGPSEvlIIAD~sAnP~~vAaDL 301 (485)
++.+ |+...-.+|. .-|+||+|.=-|..=| .|++.... .-.|... +-|-| -+|-|++||.+..|..+
T Consensus 215 gvv~vv~g~~~~g~~L~----~~~~vd~I~FTGS~~~--G~~i~~~aal~~v~lE-LGGk~--p~iV~~dADl~~Aa~~i 285 (501)
T 1uxt_A 215 DAIALLNLPGKEAEKIV----ADDRVAAVSFTGSTEV--GERVVKVGGVKQYVME-LGGGD--PAIVLEDADLDLAADKI 285 (501)
T ss_dssp TSEEECCCCHHHHHHHH----TCTTCCEEEEESCHHH--HHHHHHHHCSSEEEEE-CCCCE--EEEECTTSCHHHHHHHH
T ss_pred CeEEEEeCCcHHHHHHH----hCCCcCEEEEeCcHHH--HHHHHHhcCCCeEEEE-cCCcC--eEEECCCCCHHHHHHHH
Confidence 3322 4333333444 3488999955555322 12211100 0001111 23555 34455678998877766
Q ss_pred hhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHH---------
Q 011437 302 LSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASK--------- 346 (485)
Q Consensus 302 LaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~--------- 346 (485)
+.-+=. --.|...++.... .. ++..+.+.+.++.+.- .+.++.
T Consensus 286 ~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~ 363 (501)
T 1uxt_A 286 ARGIYSYAGQRCDAIKLVLAERP-VY-GKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVL 363 (501)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEHH-HH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcCCCCCCcCCcEEEeccc-hH-HHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 543222 2233333333322 32 5555555555543320 001111
Q ss_pred ---------------------------hhc---CC---eEEEeCCHHHHHHHhhhhc-cccccccccChH---hHHhhcc
Q 011437 347 ---------------------------ALG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESIIE 389 (485)
Q Consensus 347 ---------------------------sl~---~g---~ii~v~sl~eai~~~N~~A-PEHLel~~~~p~---~~l~~I~ 389 (485)
.+. .| .++-++|+|||++++|..- +--..|.++|.. .++.++
T Consensus 364 ~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l- 442 (501)
T 1uxt_A 364 AGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLL- 442 (501)
T ss_dssp ECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHC-
T ss_pred eCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhC-
Confidence 111 13 3455789999999999852 122566778875 456666
Q ss_pred ccceeccCCCCCccccccccCCCCCCC-----CCCccccccCCcccccceeeeEEE
Q 011437 390 NAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 390 nAGsIFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~FlK~~s~~~ 440 (485)
.+|.|++..+. .. .+.-+| .+|..|..|..+++.|+..-++..
T Consensus 443 ~~G~V~iN~~~-~~-------~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 490 (501)
T 1uxt_A 443 EVGAIYINDMP-RH-------GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 490 (501)
T ss_dssp CSSEEEETSCC-CC-------TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEE
T ss_pred CEeeEEEeCCC-CC-------CCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEE
Confidence 59999999752 11 122244 456778888888999988887754
No 48
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=94.17 E-value=6.3 Score=41.03 Aligned_cols=317 Identities=22% Similarity=0.231 Sum_probs=160.1
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 152 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~~ 152 (485)
..+-.+..+++-+.++++.|+=..-.++...+- + ....+.-+..+++.++.|...-..-.....
T Consensus 66 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~------------~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~ 129 (478)
T 3ty7_A 66 VKERQALLDKIVKEYENRKDDIVQAITDELGAP----L------------SLSERVHYQMGLNHFVAARDALDNYEFEER 129 (478)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H------------HHHHHTHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----H------------HHHhHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 344455566677777777776555555554431 0 001011244555555555432211111111
Q ss_pred ecCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-hhh-
Q 011437 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH-ILK- 228 (485)
Q Consensus 153 ~~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e-Iy~- 228 (485)
. + ..-.++.|+.-|++..|. .+|+ ...+.-.+||-.||+.=|+=-+|-. .... +......+|+.+ ++.
T Consensus 130 ~--~-~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVlKps~~t---p~t~~~l~~~~~~aGlP~gvv~v 201 (478)
T 3ty7_A 130 R--G-DDLVVKEAIGVSGLITPW-NFPT-NQTSLKLAAAFAAGSPVVLKPSEET---PFAAVILAEIFDKVGVPKGVFNL 201 (478)
T ss_dssp E--T-TEEEEEEECCCEEEECCS-SSTT-HHHHHHHHHHHHHTCCEEEECCTTS---CHHHHHHHHHHHHHTCCTTTEEE
T ss_pred C--c-cceEEecCceEEEEECCC-cchH-HHHHHHHHHHHHcCCeEEEECCCcc---hHHHHHHHHHHHHhCcCcCeEEE
Confidence 1 2 233567899999999996 3333 3444677899999987554433321 1222 334455666542 221
Q ss_pred -cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHh
Q 011437 229 -AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 300 (485)
Q Consensus 229 -vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vAaD 300 (485)
-| |...-.+|. .-|+||+|.=-|..=|- +|+.+- .|-.- +-|-+= +|-|++||.+..|.+
T Consensus 202 v~g~~~~~~~~L~----~~~~v~~v~fTGS~~~G~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~~Aa~~ 269 (478)
T 3ty7_A 202 VNGDGAGVGNPLS----EHPKVRMMSFTGSGPTGSKIMEKAAKDFK-----KVSLE-LGGKSP--YIVLDDVDIKEAAKA 269 (478)
T ss_dssp CCCCTTTTHHHHH----HCTTCCEEEECSCHHHHCC--CSTTTTTC-----EEECC-CCCCCE--EEECTTSCHHHHHHH
T ss_pred EECCChHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHHHhcCC-----ceEEe-cCCCCC--cccCCCCCHHHHHHH
Confidence 12 433333443 24889999866654321 111110 12111 124333 445667999988877
Q ss_pred hhhccCc----CCCCce-EEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc----
Q 011437 301 LLSQAEH----GPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG---- 349 (485)
Q Consensus 301 LLaQAEH----dp~a~a-iLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~---- 349 (485)
++.-+=. --.|.. +||-.+ .. ++..+.+.+.++.+.- .+.++.+.+
T Consensus 270 i~~~~~~~~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 346 (478)
T 3ty7_A 270 TTGKVVNNTGQVCTAGTRVLVPNK--IK-DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAE 346 (478)
T ss_dssp HHHHHHGGGGCCTTCCCEEEEETT--TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHhCCCCccCCCeEEEcHH--HH-HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 5532221 223333 444333 33 6666666666654420 011111110
Q ss_pred -------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHH
Q 011437 350 -------------------------------------HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWE 385 (485)
Q Consensus 350 -------------------------------------~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l 385 (485)
.| .++.++|+|||++++|..--=| ..|.++|.. .+.
T Consensus 347 ~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~ 426 (478)
T 3ty7_A 347 LFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVA 426 (478)
T ss_dssp EEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred EEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 12 2455789999999999854333 567788864 566
Q ss_pred hhccccceeccCCCCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011437 386 SIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 386 ~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~ 439 (485)
.++ .+|.|++.. ++ .++-+|- +|..|..|..+++.|+..-++.
T Consensus 427 ~~l-~~G~v~vN~-~~---------~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 427 RSI-EAGTVEINE-AG---------RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HHS-CSSEEEETT-CC-------------------------------CCGGGEEEEEEE
T ss_pred HhC-CcCeEEECC-CC---------CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 677 489999997 22 1223454 4567888888999999887765
No 49
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=93.80 E-value=7.7 Score=40.79 Aligned_cols=321 Identities=17% Similarity=0.135 Sum_probs=170.6
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce-
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS- 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~~~- 150 (485)
...+-.+..+.+-+.++++.|+=..-.++..-+- +......-+..+++.++.|.+. ..+ |.
T Consensus 80 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~Ev~~~~~~~~~~a~~-~~~-~~g 141 (495)
T 1wnd_A 80 TPKVRAECLLKLADVIEENGQVFAELESRNCGKP----------------LHSAFNDEIPAIVDVFRFFAGA-ARC-LNG 141 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHH-TTC-CEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHHHH-HHH-hcC
Confidence 3444556667777777777776555445444221 1111120256666777766542 221 11
Q ss_pred ---EEecCceEEEEEEEeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchHHHHHHHHc-----
Q 011437 151 ---VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKVLYCAKKA----- 221 (485)
Q Consensus 151 ---~~~~~Gv~lgqr~~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~piLaAA~l~----- 221 (485)
....+|...-.++.|+.-|++..|. -|| ...+.-.+||-.||+. ||+=|.. .-... .+.-++++
T Consensus 142 ~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~t-~~~l~~l~~ealP 214 (495)
T 1wnd_A 142 LAAGEYLEGHTSMIRRDPLGVVASIAPW---NYPLMMAAWKLAPALAAGNC--VVLKPSE-ITPLT-ALKLAELAKDIFP 214 (495)
T ss_dssp ECBEEEETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TCCHH-HHHHHHHHTTTSC
T ss_pred ccccCCCCCceeEEeeecCCeEEEECCC---cchHHHHHHHHHHHHHcCCe--eEeeCCC-CChHH-HHHHHHHHHHhCC
Confidence 1112465667789999999999997 467 4455678999999986 4444542 11122 22223332
Q ss_pred -CCcchhhcc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHH
Q 011437 222 -GVTHILKAG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 298 (485)
Q Consensus 222 -Gv~eIy~vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~A-Kr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~vA 298 (485)
|+=.+.. | |...-.+|. .-|.||+|.=-|..-|-.+ .+..+..--.|... +-|-|=+ |-|++||.+..|
T Consensus 215 ~gvv~vv~-g~~~~~g~~L~----~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lE-LGGk~p~--iV~~dADl~~Aa 286 (495)
T 1wnd_A 215 AGVVNILF-GRGKTVGDPLT----GHPKVRMVSLTGSIATGEHIISHTASSIKRTHME-LGGKAPV--IVFDDADIEAVV 286 (495)
T ss_dssp TTSEEECC-CCTTTTHHHHH----TCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEE-CCCCCEE--EECTTSCHHHHH
T ss_pred cCeEEEEe-CCCHHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHHHhcCCccccc-cCCCCeE--EECCcCCHHHHH
Confidence 2222322 4 555445554 2488999965555433211 00011000012111 3355543 445668998877
Q ss_pred HhhhhccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc--
Q 011437 299 ADLLSQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG-- 349 (485)
Q Consensus 299 aDLLaQAEH----dp~a~-aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~-- 349 (485)
-.++.-+=. .-.|. -++|-.+ .. ++..+.+.+.++.+.- ...++.+.+
T Consensus 287 ~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 363 (495)
T 1wnd_A 287 EGVRTFGYYNAGQDCTAACRIYAQKG--IY-DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATG 363 (495)
T ss_dssp HHHHHHTTGGGGCSTTCCCEEEEETT--TH-HHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhcCCCCCCCCcEEEecch--hH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCC
Confidence 776543221 22233 3444433 32 5555555555554410 011111110
Q ss_pred -------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc--ccccccChH---hH
Q 011437 350 -------------------------------------HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KW 384 (485)
Q Consensus 350 -------------------------------------~g---~ii~v~sl~eai~~~N~~APEH--Lel~~~~p~---~~ 384 (485)
.| .++.++|+|||++++|.. +-. ..|.++|.. .+
T Consensus 364 ~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~gL~a~v~t~d~~~a~~~ 442 (495)
T 1wnd_A 364 HIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDS-QYGLASSVWTKDVGRAHRV 442 (495)
T ss_dssp SCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSS-SCCSEEEEECSBHHHHHHH
T ss_pred CeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcC-CCCeeEEEECCCHHHHHHH
Confidence 12 345578999999999986 332 567787864 45
Q ss_pred HhhccccceeccCCCCCccccccccCCCCCCCCC-----CccccccCCcccccceeeeEE
Q 011437 385 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 385 l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsV~~FlK~~s~~ 439 (485)
+.+++ +|.|++..++.. +.-+|-+ |..|..|..+++.|+..-++.
T Consensus 443 ~~~l~-aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 443 SARLQ-YGCTWVNTHFML---------VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHCC-SSEEEESCCCCC---------CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHhCC-cceEEECCCCCC---------CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 67774 999999976431 1235544 455666666788888776654
No 50
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=93.43 E-value=9.1 Score=40.42 Aligned_cols=326 Identities=18% Similarity=0.123 Sum_probs=176.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ce
Q 011437 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TS 150 (485)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~~~-~~ 150 (485)
...+-.+..+++-+.++++.|+=..-.++..-+- -.+.+.-+..+++.++.|...-..-. ..
T Consensus 69 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~l~~~a~~~~~~~~~~ 131 (506)
T 3rh9_A 69 PIETRRKWLEDIRDGLKENREEIGRILCMEHGKP-----------------WKEAQGEVDYAAGFFDYCAKHISALDSHT 131 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHGGGGCCEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3445556677777778888777655555554421 01122235566666665544321110 01
Q ss_pred EEecCceEEEEEE-EeceeeeEeecCCCCCcc-hHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCCcc-
Q 011437 151 VENMKGVRCKRVA-RSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGVTH- 225 (485)
Q Consensus 151 ~~~~~Gv~lgqr~-~PiervG~YVPGG~a~yp-StvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~e- 225 (485)
....+|...-.++ .|+.-|++..|.- || ...+.-++||-.||+.=|+ -|.. .-.... +......+|+..
T Consensus 132 ~~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~eaGlP~g 205 (506)
T 3rh9_A 132 IPEKPKDCTWTVHYRPVGVTGLIVPWN---FPIGMIAKKLSAALAAGCPSVI--KPAS-ETPLTMIAFFSVMDKLDLPDG 205 (506)
T ss_dssp CSCCGGGCEEEEEEEECCSEEEECCSS---STTHHHHHHHHHHHHHTCCEEE--ECCT-TSCHHHHHHHHHHTTTTCCTT
T ss_pred cccCCCceeeEeecccceEEEEECCCc---hHHHHHHHHHHHHHHcCCEEEE--EcCC-ccHHHHHHHHHHHHHhCcChh
Confidence 1111344444555 9999999999963 44 4445668899999976554 3432 111222 223344566542
Q ss_pred hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 011437 226 ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 296 (485)
Q Consensus 226 Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt------~AKr~v~~~~g~VgID~~AGPSEvlIIAD~sAnP~~ 296 (485)
++. -| |...-.+|.- -|.||+|.=-|..=|- +|+.+. .|-. =+-|-+= +|-|++||.+.
T Consensus 206 vv~vv~g~~~~~g~~L~~----~p~vd~I~FTGS~~vG~~i~~~aa~~l~-----~v~l-ElGGk~p--~iV~~dADl~~ 273 (506)
T 3rh9_A 206 MVNLVMGKASVIGKVLCE----HKDVPMLSFTGSTEVGRKLIVDTAEQVK-----KLAL-ELGGNAP--FIVFDDADLEA 273 (506)
T ss_dssp SEEECCSCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTTTTTC-----EEEE-ECCCCCE--EEECTTSCHHH
T ss_pred hEEEEeCCChHHHHHHHh----CCCCCEEEEECCHHHHHHHHHHhhhcCC-----ceEE-ecCCCCc--eEECCCCCHHH
Confidence 222 24 6665566653 4789999766665331 111110 0111 1224443 34456689988
Q ss_pred HHHhhhhccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh-
Q 011437 297 IAADLLSQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL- 348 (485)
Q Consensus 297 vAaDLLaQAEH----dp~a~-aiLvT~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl- 348 (485)
.|..++.-+=. --.|. -+||-.+ .. +++.+.+.+.++.+.- .+.++.+.
T Consensus 274 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 350 (506)
T 3rh9_A 274 AADNLIANKFRGGGQTCVCANRIFVHEK--VA-DAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALD 350 (506)
T ss_dssp HHHHHHHHHHGGGGCSSSSCCEEEEETT--TH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCcEEEEcHH--HH-HHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHH
Confidence 77776542221 12233 3444333 43 6666666666555410 01111111
Q ss_pred ------------------------------------c--CC---eEEEeCCHHHHHHHhhhhcccc-ccccccChH---h
Q 011437 349 ------------------------------------G--HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---K 383 (485)
Q Consensus 349 ------------------------------------~--~g---~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~ 383 (485)
+ .| .|+.++|+|||++++|..--=| ..|.++|.. .
T Consensus 351 ~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~ 430 (506)
T 3rh9_A 351 KGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQR 430 (506)
T ss_dssp TTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHH
T ss_pred CCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 1 12 3456889999999999854322 567788864 5
Q ss_pred HHhhccccceeccCCCCCccccccccCCCCCCCCCC-----ccccccCCcccccceeeeEEEeCHHH
Q 011437 384 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQSLTEEG 445 (485)
Q Consensus 384 ~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsV~~FlK~~s~~~~s~~~ 445 (485)
+..++ .+|.|++..++.. +..+|-+| ..|..|..+++.|+..-++..-....
T Consensus 431 ~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~~~ 487 (506)
T 3rh9_A 431 VAAGL-RFGHVGWNTGTGP---------TPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFAEN 487 (506)
T ss_dssp HHHHC-CCSEEEESCCCCC---------CTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC----
T ss_pred HHHhC-CcceEEEcCCCCC---------CCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCccc
Confidence 66777 4899999986541 12366554 55666777888998877765443333
No 51
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=93.42 E-value=8.5 Score=40.05 Aligned_cols=324 Identities=15% Similarity=0.103 Sum_probs=176.1
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceE
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSV 151 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~~~~~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q~~-~~~~~ 151 (485)
..+-.+..+++.+.++++.|+=..-.++..-+ . + .+.+.-+..+++.++.|...-.. ....+
T Consensus 61 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-~---~-------------~ea~~ev~~~~~~~~~~a~~~~~~~~~~~ 123 (475)
T 1euh_A 61 YIERAAYLHKVADILMRDKEKIGAILSKEVAK-G---Y-------------KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC-C---H-------------HHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC-C---H-------------HHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 34445667777777777777655444444422 0 0 11223356666777666542211 01111
Q ss_pred Ee-cCc----eEE-EEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHHHcCC
Q 011437 152 EN-MKG----VRC-KRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAKKAGV 223 (485)
Q Consensus 152 ~~-~~G----v~l-gqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv 223 (485)
.. .+| ... -.++.|+.-|++..|. .+| +...+...+||-.||+.=| +-|... -.... +......+|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P-~~~~~~~~~~ALaaGN~vV--lKps~~-tp~t~~~l~~ll~~aGl 198 (475)
T 1euh_A 124 EGGSFEAASKKKIAVVRREPVGLVLAISPF-NYP-VNLAGSKIAPALIAGNVIA--FKPPTQ-GSISGLLLAEAFAEAGL 198 (475)
T ss_dssp EGGGTCGGGTTEEEEEEEEECSEEEEECCT-TST-THHHHHHHHHHHHTTCEEE--EECCST-THHHHHHHHHHHHHHTC
T ss_pred cCCCCCccccceeeEEEEeccceEEEECCC-Cch-HHHHHHHHHHHHHcCCEEE--EeCCCc-ChHHHHHHHHHHHHhCC
Confidence 11 245 455 6788999999999996 333 2455678899999997544 334321 11222 3334455665
Q ss_pred cc-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCC-CCcccccCCCCCcEEEEEecCCCCHHHHH
Q 011437 224 TH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS-EAMISIDMPAGPSEVLVIADIYASPVHIA 298 (485)
Q Consensus 224 ~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~-~g~VgID~~AGPSEvlIIAD~sAnP~~vA 298 (485)
.. ++. -| |.+.-.+|. .-|.||+|.=-|..-| .|++.... .-.|-.. +-|-|= +|-|++||.+..|
T Consensus 199 P~gvv~vv~g~~~~~~~~L~----~~~~v~~V~fTGS~~~--g~~i~~~aa~~~v~lE-lGGk~p--~iV~~dADl~~aa 269 (475)
T 1euh_A 199 PAGVFNTITGRGSEIGDYIV----EHQAVNFINFTGSTGI--GERIGKMAGMRPIMLE-LGGKDS--AIVLEDADLELTA 269 (475)
T ss_dssp CTTTEEECCCCHHHHHHHHH----HCTTCCEEEEESCHHH--HHHHHHHTTTSCEEEE-CCCCEE--EEECTTSCHHHHH
T ss_pred CcCeEEEEeCCcHHHHHHHH----hCCCcCEEEEECchHH--HHHHHHhcCCCcEEEE-cCCcCe--EEECCCCCHHHHH
Confidence 42 221 24 554445554 2478999985555332 22222110 0012222 235553 4556679998877
Q ss_pred Hhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------------HHHHHHhhc----
Q 011437 299 ADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEFASKALG---- 349 (485)
Q Consensus 299 aDLLaQ----AEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r---------------------~~ia~~sl~---- 349 (485)
-.++.- +=..-.|...++... +.. ++..+.+.+.++.+.- .+.++.+.+
T Consensus 270 ~~i~~~~~~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 347 (475)
T 1euh_A 270 KNIIAGAFGYSGQRCTAVKRVLVME-SVA-DELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAT 347 (475)
T ss_dssp HHHHHHHHGGGGCCSSSEEEEEEEH-HHH-HHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhhcCCCcCCCCcEEEEeh-hHH-HHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 766532 222233434443333 343 6666666666654421 111222111
Q ss_pred -------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccccccccChH---hHHhhcccc
Q 011437 350 -------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWESIIENA 391 (485)
Q Consensus 350 -------------------------------~g---~ii~v~sl~eai~~~N~~AP-EHLel~~~~p~---~~l~~I~nA 391 (485)
.| .++.++|+|||++++|..-- --..|.++|.. .+..++ .+
T Consensus 348 ~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l-~~ 426 (475)
T 1euh_A 348 ALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQL-EV 426 (475)
T ss_dssp ECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHS-CS
T ss_pred EEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhC-CE
Confidence 02 23457899999999999621 22567778875 456666 58
Q ss_pred ceeccCC-CCCccccccccCCCCCCCC-----CCccccccCCcccccceeeeEE
Q 011437 392 GSVFLGE-WTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 439 (485)
Q Consensus 392 GsIFlG~-~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~FlK~~s~~ 439 (485)
|.|++.. ++.. ++-+|- +|..|..|..+++.|+..-++.
T Consensus 427 G~v~vN~~~~~~---------~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 471 (475)
T 1euh_A 427 GTVHINNKTQRG---------TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471 (475)
T ss_dssp SEEEESSCCCCC---------STTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred eeEEECCCCCCC---------CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEE
Confidence 9999997 4431 234664 4566776777788888777764
No 52
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=80.65 E-value=3.3 Score=43.26 Aligned_cols=329 Identities=13% Similarity=0.116 Sum_probs=160.2
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCC--CCC-CceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-cCCC
Q 011437 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDK--VKL-EKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ-KSAE 148 (485)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~Al~~yt~kFD~--~~~-~~l~V~~~e~~~A~l~~~~~~Ai~~A~~nI~~Fh~~Q-~~~~ 148 (485)
..+-.+..+++-+.++++-|+=....++.... ... +.+. +.+..+ ..-+..+++.++.|...- ....
T Consensus 50 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~---~rl~~a------~~ev~~~~~~~~~~a~~~~~~~g 120 (463)
T 2h5g_A 50 PEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLL---KRLSLS------TSKLNSLAIGLRQIAASSQDSVG 120 (463)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHH---HTTCCC------HHHHHHHHHHHHHHHHHCTTSTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchh---hhhhhh------HHHHHHHHHHHHHHHHhhHhhcC
Confidence 34445566777777777776644444444310 000 0110 011111 112455666666665321 1111
Q ss_pred ceEEe---cCceEEEEEEEeceeeeEeecCCCCCcchHhhhccccceecCCCeEEEEcCCCCCCCchH--HHHHHH---H
Q 011437 149 TSVEN---MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK--VLYCAK---K 220 (485)
Q Consensus 149 ~~~~~---~~Gv~lgqr~~PiervG~YVPGG~a~ypStvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--iLaAA~---l 220 (485)
-.... .+|...-.++.|+.-|++..|. . |.-.. ..++||-.||+. ||+-|.. ..| .+.-++ .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-n-P~n~p--~~~a~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~~ 190 (463)
T 2h5g_A 121 RVLRRTRIAKNLELEQVTVPIGVLLVIFES-R-PDCLP--QVAALAIASGNG--LLLKGGK----EAAHSNRILHLLTQE 190 (463)
T ss_dssp CEEEEEEEETTEEEEEEEEECCEEEEEESS-C-TTHHH--HHHHHHHHHTCE--EEEECCG----GGHHHHHHHHHHHHH
T ss_pred cccccccCCCCceeEEEEEcCceEEEEecC-C-cHHHH--HHHHHHHHcCCE--EEEECCC----CcHHHHHHHHHHHHH
Confidence 11111 2566667889999999999987 3 43332 688999999985 4454542 344 222222 2
Q ss_pred c----CCcchhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCcEEEEEecCCCC
Q 011437 221 A----GVTHILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYAS 293 (485)
Q Consensus 221 ~----Gv~eIy~--vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~-g~VgID~~AGPSEvlIIAD~sAn 293 (485)
+ |=..++. -||...-.+|. .-|.||+|.=-|.. ...|++..... -.| +=-+-|-+ -+|-|++||
T Consensus 191 al~~~GP~gvv~vv~g~~~~g~~L~----~~p~vd~I~FTGS~--~~G~~i~~~aal~pv-~lElGGk~--p~iV~~dAD 261 (463)
T 2h5g_A 191 ALSIHGVKEAVQLVNTREEVEDLCR----LDKMIDLIIPRGSS--QLVRDIQKAAKGIPV-MGHSEGIC--HMYVDSEAS 261 (463)
T ss_dssp HHHTTTCGGGEEECCTTCCC-----------CCCSEEEEESCH--HHHHHHHHHCSSSCB-CSCSCCCE--EEEECTTCC
T ss_pred HHHhcCCCCeEEEEcCCHHHHHHHH----hCCCcCEEEEECCH--HHHHHHHHhcCCCCE-EEecCCcc--eEEEcCCCC
Confidence 2 2012222 13432212221 23789999544442 22233221100 001 11122433 344556688
Q ss_pred HHHHHHhhhhcc-CcC--CCCce-EEEecCc---hhhHHHHHHHHHHHHhcCC--C-----HHHHHH---hhc---CC--
Q 011437 294 PVHIAADLLSQA-EHG--PDSQV-VLVIVGD---GVDLDAIEQEISKQCQSLP--R-----GEFASK---ALG---HS-- 351 (485)
Q Consensus 294 P~~vAaDLLaQA-EHd--p~a~a-iLvT~s~---~la~~~V~~ei~~ql~~l~--r-----~~ia~~---sl~---~g-- 351 (485)
.+..|..++.-+ -++ -.|.. +||-.+- .+. +++.+.+.+.=..+- . ...... .+. .|
T Consensus 262 l~~Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d~p~~-~~~i~~~~~~Ga~v~~G~~~~~~g~~~~~~~~i~~eE~FgPv 340 (463)
T 2h5g_A 262 VDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLF-DQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLE 340 (463)
T ss_dssp TTTHHHHHHHHHHSCTTSTTSEEEEEEEGGGTTSHHH-HHHHHHHHHTTCEEEECHHHHC---------CCSSCCCCSSE
T ss_pred HHHHHHHHHHHhccCCCccccCcEEEEeccccchHHH-HHHHHHHHhCCCEEEeCCcccccCccCCCCchHHhccccCce
Confidence 887766655322 122 12222 4443332 132 444333321100000 0 000001 111 13
Q ss_pred -eEEEeCCHHHHHHHhhhhcccc-ccccccChH---hHHhhccccceeccCCCCCccccccccCCCCCCCCC-----Ccc
Q 011437 352 -FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYA 421 (485)
Q Consensus 352 -~ii~v~sl~eai~~~N~~APEH-Lel~~~~p~---~~l~~I~nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~A 421 (485)
.|+.++|+|||++++|.+--=| ..|.++|.. .++.++ .+|.|++..++.. +.-+|=+ |..
T Consensus 341 l~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~G 410 (463)
T 2h5g_A 341 LCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHV-DSACVFWNASTRF---------SDGYRFGLGAEVGIS 410 (463)
T ss_dssp EEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCGGG---------CSTTTTTSSCCSCEE
T ss_pred EEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhC-CeeEEEEeCCccC---------CCCCCCCCCccCcCC
Confidence 3456899999999999843222 677888875 466676 4899999975421 1235655 555
Q ss_pred --cc--ccCCcccccceeeeEEE
Q 011437 422 --RM--YGGVSLDSFLKYMTVQS 440 (485)
Q Consensus 422 --R~--~sgLsV~~FlK~~s~~~ 440 (485)
|+ .|..+++.|+..-++..
T Consensus 411 ~~r~~~~G~~gl~~ft~~K~v~~ 433 (463)
T 2h5g_A 411 TSRIHARGPVGLEGLLTTKWLLR 433 (463)
T ss_dssp CCSSSCCEECCGGGGEEEEEEEE
T ss_pred CCcccCCCHHHHHHhceeEEEEE
Confidence 65 67778889988877654
No 53
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=65.81 E-value=8.4 Score=40.75 Aligned_cols=87 Identities=11% Similarity=0.045 Sum_probs=55.1
Q ss_pred eEEEeC---CH-----HHHHHHhhhhcccc--ccccccChH---hHHhhcc-ccceeccCCCCCc--cccccccCCCCCC
Q 011437 352 FMVFAR---DM-----LEGISFSNLYAPEH--LIVNVKDAE---KWESIIE-NAGSVFLGEWTPE--SVGDYASGTNHVL 415 (485)
Q Consensus 352 ~ii~v~---sl-----~eai~~~N~~APEH--Lel~~~~p~---~~l~~I~-nAGsIFlG~~tp~--a~GDY~aGpNHvL 415 (485)
.|+.++ |. |||++++|.. +-. ..|.++|.. .++.+++ .+|.|++..++.- +.|-- ..+..+
T Consensus 410 ~v~~~~~~~~~~~~~~deAi~~aN~~-~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~--~~~~~~ 486 (534)
T 2y53_A 410 SVAPYRVTTDTNALPEAHAVALARRG-QGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG--NVMPMS 486 (534)
T ss_dssp EEEEECCCCC---CTTHHHHHHHHTT-SSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS--CCCTTS
T ss_pred EEEEECCCCCcccCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC--CCCCCC
Confidence 345678 99 9999999985 333 467788864 5677887 6999999976420 11100 012234
Q ss_pred CCC-----Cccccc-cCCcccccceeeeEEEe
Q 011437 416 PTY-----GYARMY-GGVSLDSFLKYMTVQSL 441 (485)
Q Consensus 416 PT~-----G~AR~~-sgLsV~~FlK~~s~~~~ 441 (485)
|-+ |..|.. +.-+++.|++..+++..
T Consensus 487 pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 487 LHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp EECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred CCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 433 455663 44677888888888764
No 54
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=59.14 E-value=15 Score=39.45 Aligned_cols=287 Identities=14% Similarity=0.104 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEe-ceeeeEeecCCCCCcch-HhhhccccceecCCCeEEEE
Q 011437 125 AVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARS-IGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLA 202 (485)
Q Consensus 125 ~~~~Ai~~A~~nI~~Fh~~Q~~~~~~~~~~~Gv~lgqr~~P-iervG~YVPGG~a~ypS-tvLM~aIPAkVAGV~~Ivv~ 202 (485)
+..+-++..++..++.+..+.. . .++......++| +.-|++..|.- ||- ...+.+.||- ||+. ||+
T Consensus 165 ~~~~~~~~~a~~~~~~~~~~~~-----~-~~~~~~~~~~r~p~GVV~~I~PwN---fP~~~~~~~~apAL-aGNt--VVl 232 (563)
T 4e3x_A 165 ELIDFFRFNAKFAVELEGEQPI-----S-VPPSTNHTVYRGLEGFVAAISPFN---FTAIGGNLAGAPAL-MGNV--VLW 232 (563)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC-----C-CTTEEEEEECCBCSSEEEEECCSS---CHHHHHHHHHHHHH-TTCC--EEE
T ss_pred HHHHHHHHHHHHHHHhhCCCcc-----C-CCCCcceEEEecCceEEEEECCch---HHHHHHHHHHHHhh-cCCE--EEE
Confidence 3344455555555554432211 1 122233345555 58899999963 453 3445566886 7765 445
Q ss_pred cCCCCCCCchH--HHHHHHHcCCcc-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCC
Q 011437 203 TPPSQDGSICK--VLYCAKKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSE 270 (485)
Q Consensus 203 TPP~~~G~i~p--iLaAA~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIpkVDkIvGPGN~yV------t~AKr~v~~~~ 270 (485)
-|.. .-.... +......+|+.. ++. -| |...-.+|. +=|.||+|.=-|..=| ++|+.+-....
T Consensus 233 KPs~-~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~----~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~ 307 (563)
T 4e3x_A 233 KPSD-TAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVT----SSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRT 307 (563)
T ss_dssp ECCG-GGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHT----TCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSS
T ss_pred ECCC-CChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHHhhCCcccc
Confidence 5542 111122 334455667642 332 24 554444554 2488999975555432 33332210000
Q ss_pred C-cccccCCCCCcEEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC-----
Q 011437 271 A-MISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----- 340 (485)
Q Consensus 271 g-~VgID~~AGPSEvlIIAD~sAnP~~vAaDLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l~r----- 340 (485)
. .| +==+-|-+ -+|.|++||.+..|..++.-+=. --.|...++.... +. +++.+.+.+.++.+.-
T Consensus 308 ~prv-~lElGGk~--p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~s-i~-d~f~~~l~~~~~~l~vGdp~~ 382 (563)
T 4e3x_A 308 FPRL-AGECGGKN--FHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKS-LW-PQIKGRLLEEHSRIKVGDPAE 382 (563)
T ss_dssp CCEE-EEECCCCE--EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGG-GH-HHHHHHHHHHHHTCCBSCTTT
T ss_pred CCce-eccCCCCC--ceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecc-hH-HHHHHHHHHHHHhccCCCccc
Confidence 0 01 00122433 35556789999988877653322 2234344444332 43 7777777776665520
Q ss_pred ------------------HHHHHHhhc---------------------------------------CC---eEEEeCC--
Q 011437 341 ------------------GEFASKALG---------------------------------------HS---FMVFARD-- 358 (485)
Q Consensus 341 ------------------~~ia~~sl~---------------------------------------~g---~ii~v~s-- 358 (485)
.+.++.+.+ .| .++.++|
T Consensus 383 d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~ 462 (563)
T 4e3x_A 383 DFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDK 462 (563)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGG
T ss_pred CcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCC
Confidence 122222221 02 1233564
Q ss_pred HHHHHHHhhhhccc--cccccccChH---hHHhhcc-ccceeccCCCCCccccccccCCCCCCCCC-----Ccc-ccccC
Q 011437 359 MLEGISFSNLYAPE--HLIVNVKDAE---KWESIIE-NAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYA-RMYGG 426 (485)
Q Consensus 359 l~eai~~~N~~APE--HLel~~~~p~---~~l~~I~-nAGsIFlG~~tp~a~GDY~aGpNHvLPT~-----G~A-R~~sg 426 (485)
+|||++++|.-.|- -..|.++|.. .+.++++ .+|.|++..++.... ..-+|-+ |+. |..|.
T Consensus 463 ~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~-------~~~~PFGG~k~SG~g~~~~G~ 535 (563)
T 4e3x_A 463 YRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSV-------VGQQPFGGARASGTNDKPGGP 535 (563)
T ss_dssp HHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCC-------TTTSCCCCEETTBCCCCTTST
T ss_pred HHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCC-------cCCCCCCCccccCCCCccCCH
Confidence 89999999422332 3467888876 6677775 799999998643221 1123333 333 55666
Q ss_pred CcccccceeeeEEE
Q 011437 427 VSLDSFLKYMTVQS 440 (485)
Q Consensus 427 LsV~~FlK~~s~~~ 440 (485)
.++..|+..-++-+
T Consensus 536 ~~l~~~~~~k~v~~ 549 (563)
T 4e3x_A 536 HYILRWTSPQVIKE 549 (563)
T ss_dssp TGGGGGBCCEEEEE
T ss_pred HHHHHhCceEEEEE
Confidence 77888877666543
No 55
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=49.52 E-value=25 Score=34.27 Aligned_cols=73 Identities=18% Similarity=0.256 Sum_probs=50.0
Q ss_pred CCeEEEEcCCCCCCCchH-HHHHHHHcCCcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011437 196 CKTVVLATPPSQDGSICK-VLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 274 (485)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p-iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~Vg 274 (485)
+.++|++.|+.-+..--- +..||..+|++.++-+=-..| ||++||...-.+-+. .+-
T Consensus 153 ~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~A-aa~~~~~~~~~~~~~---------------------vlV 210 (394)
T 3qfu_A 153 VTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTA-AAIAYGLDKSDKEHQ---------------------IIV 210 (394)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHH-HHHHTTTTSCSSCEE---------------------EEE
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHH-HHHHHhhccCCCCce---------------------EEE
Confidence 467888888854322223 888999999999888877655 467898654222111 155
Q ss_pred ccCCCCCcEEEEEecC
Q 011437 275 IDMPAGPSEVLVIADI 290 (485)
Q Consensus 275 ID~~AGPSEvlIIAD~ 290 (485)
+|+=+|=+++.|+...
T Consensus 211 ~D~Gggt~dvsv~~~~ 226 (394)
T 3qfu_A 211 YDLGGGTFDVSLLSIE 226 (394)
T ss_dssp EEECSSCEEEEEEEEE
T ss_pred EEcCCCceeEEEEEEe
Confidence 7888899998888643
No 56
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=38.42 E-value=43 Score=32.94 Aligned_cols=74 Identities=16% Similarity=0.267 Sum_probs=49.8
Q ss_pred CCeEEEEcCCCCCCCchH-HHHHHHHcCCcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011437 196 CKTVVLATPPSQDGSICK-VLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 274 (485)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p-iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~Vg 274 (485)
+.++|++.|+.-+..--- +..||..+|++.+.-+=-..| ||++||...-.+. +.+ .+.+-
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~A-Aa~~~~~~~~~~~----~~~--------------~~vlV 218 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTA-AAIAYGLDKKGCA----GGE--------------KNVLI 218 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHH-HHHHTTTTSSCSS----SSC--------------CEEEE
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHH-HHHHHHhhccccc----CCC--------------ceEEE
Confidence 568899999854322223 889999999999888877766 6789997643210 000 01245
Q ss_pred ccCCCCCcEEEEEe
Q 011437 275 IDMPAGPSEVLVIA 288 (485)
Q Consensus 275 ID~~AGPSEvlIIA 288 (485)
+|+=+|=+++.|+-
T Consensus 219 ~D~GgGT~dvsv~~ 232 (404)
T 3i33_A 219 FDLGGGTFDVSILT 232 (404)
T ss_dssp EEECSSCEEEEEEE
T ss_pred EECCCCcEEEEEEE
Confidence 78888888888775
No 57
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=34.94 E-value=49 Score=32.77 Aligned_cols=73 Identities=16% Similarity=0.238 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCCCCCchH-HHHHHHHcCCcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011437 196 CKTVVLATPPSQDGSICK-VLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 274 (485)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p-iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~Vg 274 (485)
+.++|++.|..-+..--- +..||..+|.+.+.-+=-..| ||++||.+.- +..-. .+.+-
T Consensus 150 ~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~A-Aa~~~~~~~~-----------------~~~~~--~~vlv 209 (409)
T 4gni_A 150 VTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAA-AVLAYDARPE-----------------ATISD--KIIVV 209 (409)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHH-HHHHTTC-----------------------CC--EEEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHH-HHHHHhcccc-----------------cCCCC--CEEEE
Confidence 467888888753322223 889999999998888776655 5799998630 00000 01255
Q ss_pred ccCCCCCcEEEEEe
Q 011437 275 IDMPAGPSEVLVIA 288 (485)
Q Consensus 275 ID~~AGPSEvlIIA 288 (485)
+|+=+|=+++-|+.
T Consensus 210 ~D~GgGT~dvsv~~ 223 (409)
T 4gni_A 210 ADLGGSRSDVTVLA 223 (409)
T ss_dssp EEECSSCEEEEEEE
T ss_pred EECCCCceEEEEEE
Confidence 78888999988864
No 58
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=30.07 E-value=77 Score=30.88 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=48.3
Q ss_pred CCeEEEEcCCCCCCCchH-HHHHHHHcCCcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 011437 196 CKTVVLATPPSQDGSICK-VLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 274 (485)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p-iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~Vg 274 (485)
+.++|++.|+.-+..--- +..|+..+|++.++-+=-..| ||++||.+.-.+ + .+.+-
T Consensus 135 ~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~A-aa~~~~~~~~~~-~--------------------~~~lV 192 (383)
T 1dkg_D 135 VTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTA-AALAYGLDKGTG-N--------------------RTIAV 192 (383)
T ss_dssp CCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHH-HHHHHTCCC-CC-E--------------------EEEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHH-HHHHHHhccCCC-C--------------------cEEEE
Confidence 467777777632211112 788999999998887765554 568999753100 0 01255
Q ss_pred ccCCCCCcEEEEEecCC
Q 011437 275 IDMPAGPSEVLVIADIY 291 (485)
Q Consensus 275 ID~~AGPSEvlIIAD~s 291 (485)
+|+=+|=+++.|+-...
T Consensus 193 vD~Gggttdvsv~~~~~ 209 (383)
T 1dkg_D 193 YDLGGGTFDISIIEIDE 209 (383)
T ss_dssp EEECSSCEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEe
Confidence 79999999999988763
No 59
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=25.33 E-value=1.3e+02 Score=28.74 Aligned_cols=72 Identities=19% Similarity=0.216 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCCCCCCchH--HHHHHHHcCCcchhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCc
Q 011437 195 GCKTVVLATPPSQDGSICK--VLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAM 272 (485)
Q Consensus 195 GV~~Ivv~TPP~~~G~i~p--iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTetIpkVDkIvGPGN~yVt~AKr~v~~~~g~ 272 (485)
|..++|++-|+.-+ ...- +..|+..+|++.++.+=-..| ||++||.+.- + . .+.
T Consensus 94 ~~~~~vitvP~~~~-~~~r~~~~~a~~~aG~~~~~li~ep~A-aa~~~~~~~~------------------~--~--~~~ 149 (344)
T 1jce_A 94 FKPRVVIGVPIGIT-DVERRAILDAGLEAGASKVFLIEEPMA-AAIGSNLNVE------------------E--P--SGN 149 (344)
T ss_dssp CCCEEEEEECTTCC-HHHHHHHHHHHHHTTCSEEEEEEHHHH-HHHHTTCCTT------------------S--S--SCE
T ss_pred CCCeEEEEECCCCC-HHHHHHHHHHHHHcCCCeEeccCCHHH-HHHhcCCCCC------------------C--C--ceE
Confidence 34678888887532 2222 778999999998877755544 5689986420 0 0 112
Q ss_pred ccccCCCCCcEEEEEecC
Q 011437 273 ISIDMPAGPSEVLVIADI 290 (485)
Q Consensus 273 VgID~~AGPSEvlIIAD~ 290 (485)
+-+|+=+|=+++.|+.++
T Consensus 150 lVvDiGggttdvsv~~~~ 167 (344)
T 1jce_A 150 MVVDIGGGTTEVAVISLG 167 (344)
T ss_dssp EEEEECSSCEEEEEEETT
T ss_pred EEEEeCCCeEEEEEEEcC
Confidence 568999999999999876
No 60
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=21.48 E-value=1.1e+02 Score=32.77 Aligned_cols=48 Identities=17% Similarity=0.227 Sum_probs=31.8
Q ss_pred CCeEEEEcCCCCCCCchH-HHHHHHHcCCcchhhcchHHHHHHHhhcCCC
Q 011437 196 CKTVVLATPPSQDGSICK-VLYCAKKAGVTHILKAGGAQAISAMAWGTES 244 (485)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p-iLaAA~l~Gv~eIy~vGGAQAIAAlAyGTet 244 (485)
|.++|++.|..-+..--- +..||.++|.+.+.-+=-..| ||+|||...
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~A-AAlay~l~~ 183 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTA-AALAYGLDK 183 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHH-HHHHTTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHH-HHHHhhhcc
Confidence 567777777642211112 788999999987777665543 569999753
No 61
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=20.84 E-value=3.8e+02 Score=25.52 Aligned_cols=97 Identities=14% Similarity=0.064 Sum_probs=51.2
Q ss_pred EecCCcHHHHHHHHHhcCCCCcccccCCCC-CcEEEEEecCCCCHHH-HHH------------hhhhccCcCCCCceEEE
Q 011437 251 IFGPGNQYVTAAKMILQNSEAMISIDMPAG-PSEVLVIADIYASPVH-IAA------------DLLSQAEHGPDSQVVLV 316 (485)
Q Consensus 251 IvGPGN~yVt~AKr~v~~~~g~VgID~~AG-PSEvlIIAD~sAnP~~-vAa------------DLLaQAEHdp~a~aiLv 316 (485)
|+|-|++=-.-++.+... .+ --|++-|+|.+.+-.. +|. |||+ +++.-+|.|
T Consensus 7 iiG~G~ig~~~~~~l~~~----------~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~----~~~vD~V~i 72 (334)
T 3ohs_X 7 IVSVGLISSDFTAVLQTL----------PRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAK----DPNVEVAYV 72 (334)
T ss_dssp EECCSHHHHHHHHHHTTS----------CTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHH----CTTCCEEEE
T ss_pred EECchHHHHHHHHHHHhC----------CCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhc----CCCCCEEEE
Confidence 789998755555444321 11 2378888886533211 111 1221 234445555
Q ss_pred ecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEe-----CCHHHHHHHhhhhccccccccc
Q 011437 317 IVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFA-----RDMLEGISFSNLYAPEHLIVNV 378 (485)
Q Consensus 317 T~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v-----~sl~eai~~~N~~APEHLel~~ 378 (485)
++...+ +.+++.++|++|.-|+| .|++|+-++.....--.+-+++
T Consensus 73 ~tp~~~-----------------H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 73 GTQHPQ-----------------HKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp CCCGGG-----------------HHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCcHH-----------------HHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 554433 24556667777765554 3778877776654433444443
No 62
>1vr0_A Probable 2-phosphosulfolactate phosphatase; 15026306, putative 2-phosphosulfolactate phosphatase, struct genomics; HET: 3SL; 2.49A {Clostridium acetobutylicum} SCOP: c.148.1.1
Probab=20.03 E-value=48 Score=32.24 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=45.1
Q ss_pred HHHHhhcCC--eEEEeCCHHHHHHHhhhhccccccccccChHhHHhhccccceec-cCCCCCccc-cccccCCCCCCCC-
Q 011437 343 FASKALGHS--FMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVF-LGEWTPESV-GDYASGTNHVLPT- 417 (485)
Q Consensus 343 ia~~sl~~g--~ii~v~sl~eai~~~N~~APEHLel~~~~p~~~l~~I~nAGsIF-lG~~tp~a~-GDY~aGpNHvLPT- 417 (485)
.+..+|++| .|+.+.++|||.++++.+- +...|.-+.- -.+--| | +|+ ||..+ .+-+.|-.=||||
T Consensus 45 ti~~Al~~GA~~V~p~~~~eeA~~~a~~~~-~~~lLaGER~-----g~ki~G--FD~gN-SP~e~~~~~v~Gk~lVltTT 115 (247)
T 1vr0_A 45 VITTALNNGCKRVVPVLTVEEALKKVKEYG-KDAILGGERK-----GLKIEG--FDFSN-SPMEYTEDVVKGKTLIMTTT 115 (247)
T ss_dssp HHHHHHHTTCCEEEECSCHHHHHHHHHHHG-GGEEEEECBT-----TBCCTT--CSCCS-CGGGCCHHHHTTCEEEEECS
T ss_pred HHHHHHHCCCCEEEEeCCHHHHHHHHhhCC-CCeEEEEccC-----CccCCC--CCCCC-CHHHHhhcccCCCEEEEECC
Confidence 445677776 5999999999999999863 4333433310 011112 6 665 78654 4457999999998
Q ss_pred CCc
Q 011437 418 YGY 420 (485)
Q Consensus 418 ~G~ 420 (485)
+||
T Consensus 116 NGT 118 (247)
T 1vr0_A 116 NGT 118 (247)
T ss_dssp SHH
T ss_pred cHH
Confidence 666
Done!