Query 011440
Match_columns 485
No_of_seqs 162 out of 935
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:11:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o2z_A Hypothetical protein; s 100.0 3.7E-82 1.3E-86 642.0 27.7 317 57-474 2-320 (323)
2 2ppv_A Uncharacterized protein 100.0 3.4E-81 1.2E-85 636.2 30.7 317 58-476 3-323 (332)
3 2q7x_A UPF0052 protein SP_1565 100.0 1E-81 3.5E-86 640.7 23.5 316 58-471 3-324 (326)
4 2p0y_A Hypothetical protein LP 100.0 7E-82 2.4E-86 644.7 20.7 318 57-472 8-329 (341)
5 3c3d_A 2-phospho-L-lactate tra 100.0 1.8E-66 6.2E-71 524.7 16.1 281 62-473 1-307 (311)
6 4g6h_A Rotenone-insensitive NA 72.1 1.8 6.1E-05 45.6 2.8 33 56-88 39-71 (502)
7 3s2u_A UDP-N-acetylglucosamine 67.2 4.7 0.00016 40.1 4.6 31 58-88 1-36 (365)
8 3vrd_B FCCB subunit, flavocyto 63.1 4.4 0.00015 40.3 3.4 34 59-93 2-37 (401)
9 3klj_A NAD(FAD)-dependent dehy 57.8 6.1 0.00021 39.9 3.4 33 56-88 6-38 (385)
10 4eqs_A Coenzyme A disulfide re 56.4 6.3 0.00022 40.4 3.3 26 60-85 1-26 (437)
11 4hb9_A Similarities with proba 49.5 9.9 0.00034 37.0 3.3 30 59-88 1-30 (412)
12 3lyu_A Putative hydrogenase; t 47.6 15 0.0005 31.9 3.7 30 59-88 18-50 (142)
13 3hyw_A Sulfide-quinone reducta 47.0 11 0.00039 38.1 3.4 26 59-84 2-27 (430)
14 3kkj_A Amine oxidase, flavin-c 46.1 16 0.00054 31.6 3.7 30 59-88 2-31 (336)
15 3itj_A Thioredoxin reductase 1 44.9 11 0.00039 35.6 2.8 32 57-88 20-51 (338)
16 1mo9_A ORF3; nucleotide bindin 43.6 17 0.00058 38.0 4.2 41 52-93 36-76 (523)
17 3r9u_A Thioredoxin reductase; 42.1 21 0.0007 33.4 4.1 39 58-96 3-41 (315)
18 1id1_A Putative potassium chan 41.2 23 0.00078 30.3 4.0 33 58-90 2-34 (153)
19 3fwz_A Inner membrane protein 40.3 30 0.001 29.3 4.5 36 55-90 3-38 (140)
20 2gag_B Heterotetrameric sarcos 40.2 19 0.00065 35.2 3.7 42 58-99 20-63 (405)
21 3fbs_A Oxidoreductase; structu 39.9 19 0.00064 33.3 3.4 29 60-88 3-31 (297)
22 3lwz_A 3-dehydroquinate dehydr 39.9 19 0.00066 32.6 3.3 42 326-374 62-110 (153)
23 3n8k_A 3-dehydroquinate dehydr 39.3 25 0.00087 32.4 4.0 37 331-374 92-131 (172)
24 3lrx_A Putative hydrogenase; a 39.2 18 0.00061 31.9 3.0 31 58-88 22-55 (158)
25 3dfz_A SIRC, precorrin-2 dehyd 39.0 23 0.00077 33.7 3.8 34 57-90 29-62 (223)
26 3hgm_A Universal stress protei 38.6 40 0.0014 27.8 5.0 47 323-371 98-147 (147)
27 3kip_A 3-dehydroquinase, type 38.4 29 0.001 31.9 4.3 57 332-395 82-155 (167)
28 2vdc_G Glutamate synthase [NAD 38.3 26 0.00088 36.3 4.5 32 56-87 119-150 (456)
29 3rp8_A Flavoprotein monooxygen 37.9 19 0.00065 35.7 3.3 30 59-88 23-52 (407)
30 1ryi_A Glycine oxidase; flavop 37.3 24 0.00081 34.3 3.8 41 59-99 17-57 (382)
31 1kyq_A Met8P, siroheme biosynt 37.1 19 0.00064 35.3 3.0 36 57-92 11-46 (274)
32 3fg2_P Putative rubredoxin red 36.8 23 0.00078 35.4 3.7 30 59-88 1-32 (404)
33 3f8d_A Thioredoxin reductase ( 36.1 24 0.00081 33.0 3.5 30 59-88 15-44 (323)
34 1xhc_A NADH oxidase /nitrite r 35.9 19 0.00065 35.8 2.9 28 55-82 4-31 (367)
35 1lss_A TRK system potassium up 35.7 24 0.00083 28.8 3.1 31 58-88 3-33 (140)
36 3alj_A 2-methyl-3-hydroxypyrid 35.5 22 0.00075 34.9 3.3 31 58-88 10-40 (379)
37 3a1f_A Cytochrome B-245 heavy 35.1 18 0.00061 31.5 2.3 24 58-81 16-39 (186)
38 3ics_A Coenzyme A-disulfide re 34.1 22 0.00074 37.6 3.1 33 55-87 32-66 (588)
39 3nix_A Flavoprotein/dehydrogen 33.3 28 0.00094 34.4 3.6 29 60-88 6-34 (421)
40 1yvv_A Amine oxidase, flavin-c 33.1 30 0.001 32.8 3.7 30 60-89 3-32 (336)
41 3ihm_A Styrene monooxygenase A 33.0 21 0.0007 36.2 2.7 34 57-90 20-53 (430)
42 2ywl_A Thioredoxin reductase r 32.8 31 0.0011 29.8 3.5 29 61-89 3-31 (180)
43 2e4g_A Tryptophan halogenase; 32.7 29 0.00099 36.5 3.8 30 59-88 25-57 (550)
44 3ef6_A Toluene 1,2-dioxygenase 32.6 29 0.00098 34.8 3.7 29 60-88 3-33 (410)
45 2uyg_A 3-dehydroquinate dehydr 32.6 29 0.00099 31.3 3.2 34 334-374 67-103 (149)
46 1o94_A Tmadh, trimethylamine d 32.6 29 0.00099 38.1 3.9 57 55-114 385-441 (729)
47 2eix_A NADH-cytochrome B5 redu 32.3 25 0.00085 32.3 2.9 24 58-81 115-138 (243)
48 3lxd_A FAD-dependent pyridine 32.3 25 0.00084 35.2 3.1 31 58-88 8-40 (415)
49 3da8_A Probable 5'-phosphoribo 32.2 35 0.0012 32.3 3.9 52 55-108 8-62 (215)
50 1ps9_A 2,4-dienoyl-COA reducta 32.2 30 0.001 37.3 4.0 32 56-87 370-401 (671)
51 1y56_B Sarcosine oxidase; dehy 32.2 36 0.0012 33.1 4.1 40 59-99 5-45 (382)
52 2gpj_A Siderophore-interacting 32.1 40 0.0014 31.7 4.4 31 59-89 112-144 (252)
53 3h8l_A NADH oxidase; membrane 32.0 23 0.00079 35.2 2.8 29 60-88 2-33 (409)
54 4a9w_A Monooxygenase; baeyer-v 31.6 31 0.0011 32.6 3.6 29 60-88 4-32 (357)
55 4b4o_A Epimerase family protei 31.6 34 0.0012 32.2 3.8 63 330-400 174-240 (298)
56 1qfj_A Protein (flavin reducta 31.4 27 0.00092 31.9 3.0 34 58-91 101-139 (232)
57 3vot_A L-amino acid ligase, BL 31.1 45 0.0015 33.5 4.8 38 57-94 3-40 (425)
58 3h28_A Sulfide-quinone reducta 31.1 28 0.00095 35.1 3.2 30 59-88 2-33 (430)
59 3sx6_A Sulfide-quinone reducta 30.9 30 0.001 35.0 3.5 29 60-88 5-36 (437)
60 3dlo_A Universal stress protei 30.9 59 0.002 27.8 4.9 47 323-371 105-154 (155)
61 3fdx_A Putative filament prote 30.8 64 0.0022 26.4 5.0 46 323-371 94-142 (143)
62 1mjh_A Protein (ATP-binding do 30.6 79 0.0027 26.5 5.7 48 324-373 109-159 (162)
63 2a87_A TRXR, TR, thioredoxin r 30.6 30 0.001 33.1 3.3 32 57-88 12-43 (335)
64 3ps9_A TRNA 5-methylaminomethy 30.6 37 0.0013 36.6 4.3 36 54-89 267-302 (676)
65 3lzw_A Ferredoxin--NADP reduct 30.5 33 0.0011 32.2 3.5 29 60-88 8-36 (332)
66 2gf3_A MSOX, monomeric sarcosi 30.5 33 0.0011 33.2 3.6 30 59-88 3-32 (389)
67 1trb_A Thioredoxin reductase; 30.2 22 0.00076 33.5 2.2 30 59-88 5-34 (320)
68 2bw0_A 10-FTHFDH, 10-formyltet 30.1 58 0.002 32.5 5.3 36 58-94 21-57 (329)
69 3tqr_A Phosphoribosylglycinami 30.1 48 0.0016 31.2 4.5 51 58-109 4-57 (215)
70 3cgv_A Geranylgeranyl reductas 29.8 34 0.0011 33.2 3.5 29 60-88 5-33 (397)
71 1gqo_A Dehydroquinase; dehydra 29.7 39 0.0013 30.3 3.5 38 330-374 63-103 (143)
72 2weu_A Tryptophan 5-halogenase 29.6 25 0.00086 36.1 2.7 29 60-88 3-34 (511)
73 2gm3_A Unknown protein; AT3G01 29.6 73 0.0025 27.3 5.3 49 324-374 113-164 (175)
74 2vou_A 2,6-dihydroxypyridine h 29.5 36 0.0012 33.7 3.7 30 59-88 5-34 (397)
75 3d1c_A Flavin-containing putat 29.2 35 0.0012 32.8 3.5 29 60-88 5-34 (369)
76 1h05_A 3-dehydroquinate dehydr 29.0 39 0.0013 30.4 3.4 39 329-374 64-105 (146)
77 3oc4_A Oxidoreductase, pyridin 28.7 27 0.00092 35.5 2.7 28 60-87 3-32 (452)
78 3v76_A Flavoprotein; structura 28.6 35 0.0012 34.8 3.6 32 57-88 25-56 (417)
79 1k0i_A P-hydroxybenzoate hydro 28.6 32 0.0011 33.7 3.1 29 60-88 3-31 (394)
80 2q7v_A Thioredoxin reductase; 28.5 33 0.0011 32.5 3.1 31 59-89 8-38 (325)
81 3k30_A Histamine dehydrogenase 28.4 33 0.0011 37.2 3.5 33 56-88 388-420 (690)
82 3dme_A Conserved exported prot 27.9 39 0.0013 32.2 3.5 29 60-88 5-33 (369)
83 2xdo_A TETX2 protein; tetracyc 27.8 37 0.0013 33.5 3.5 31 59-89 26-56 (398)
84 3u80_A 3-dehydroquinate dehydr 27.6 57 0.002 29.5 4.3 37 331-374 68-110 (151)
85 2z08_A Universal stress protei 27.5 95 0.0032 25.3 5.5 47 323-371 87-136 (137)
86 1tvc_A Methane monooxygenase c 27.5 36 0.0012 31.5 3.1 34 59-92 117-155 (250)
87 3nrn_A Uncharacterized protein 27.5 34 0.0012 34.0 3.1 29 60-88 1-29 (421)
88 2bc0_A NADH oxidase; flavoprot 27.1 33 0.0011 35.3 3.0 31 58-88 34-67 (490)
89 2aqj_A Tryptophan halogenase, 27.0 35 0.0012 35.6 3.2 31 59-89 5-38 (538)
90 3g3e_A D-amino-acid oxidase; F 26.8 31 0.0011 33.3 2.6 23 60-82 1-23 (351)
91 2zbw_A Thioredoxin reductase; 26.8 42 0.0014 31.8 3.5 30 59-88 5-34 (335)
92 3ka7_A Oxidoreductase; structu 26.4 36 0.0012 33.6 3.1 29 60-88 1-29 (425)
93 3tnj_A Universal stress protei 26.4 68 0.0023 26.5 4.4 48 323-373 97-147 (150)
94 1fdr_A Flavodoxin reductase; f 26.3 35 0.0012 31.4 2.8 23 59-81 106-128 (248)
95 2gqw_A Ferredoxin reductase; f 26.3 39 0.0013 33.9 3.3 27 58-84 6-32 (408)
96 2g1u_A Hypothetical protein TM 26.3 47 0.0016 28.4 3.4 32 57-88 17-48 (155)
97 1zk7_A HGII, reductase, mercur 26.3 42 0.0014 34.2 3.6 30 59-88 4-33 (467)
98 2b9w_A Putative aminooxidase; 26.2 50 0.0017 32.6 4.1 31 58-88 5-36 (424)
99 2x3n_A Probable FAD-dependent 26.1 42 0.0014 32.9 3.5 29 60-88 7-35 (399)
100 1gtz_A 3-dehydroquinate dehydr 26.1 52 0.0018 29.9 3.7 39 329-374 68-110 (156)
101 3idf_A USP-like protein; unive 26.0 74 0.0025 25.9 4.5 46 323-371 91-137 (138)
102 1nhp_A NADH peroxidase; oxidor 25.9 32 0.0011 34.8 2.6 29 60-88 1-31 (447)
103 3k7m_X 6-hydroxy-L-nicotine ox 25.8 42 0.0014 33.2 3.4 29 60-88 2-30 (431)
104 2bmw_A Ferredoxin--NADP reduct 25.7 40 0.0014 32.3 3.1 23 58-80 147-169 (304)
105 1dxl_A Dihydrolipoamide dehydr 25.7 43 0.0015 34.0 3.6 31 58-88 5-35 (470)
106 3s3t_A Nucleotide-binding prot 25.6 86 0.0029 25.7 4.9 46 324-371 96-145 (146)
107 4eh1_A Flavohemoprotein; struc 25.5 36 0.0012 31.2 2.7 25 57-81 112-136 (243)
108 2r9z_A Glutathione amide reduc 25.5 42 0.0014 34.3 3.4 37 59-96 4-40 (463)
109 2dum_A Hypothetical protein PH 25.3 1E+02 0.0035 26.1 5.5 50 323-374 105-157 (170)
110 1ges_A Glutathione reductase; 25.2 45 0.0015 33.9 3.6 37 59-96 4-40 (450)
111 2cul_A Glucose-inhibited divis 25.1 54 0.0018 30.0 3.8 33 59-91 3-35 (232)
112 2qae_A Lipoamide, dihydrolipoy 25.1 43 0.0015 34.1 3.4 29 60-88 3-31 (468)
113 2ivd_A PPO, PPOX, protoporphyr 25.1 46 0.0016 33.5 3.6 32 57-88 14-45 (478)
114 2pyx_A Tryptophan halogenase; 24.9 38 0.0013 35.3 3.0 22 59-80 7-28 (526)
115 3iwa_A FAD-dependent pyridine 24.7 38 0.0013 34.5 3.0 29 59-87 3-33 (472)
116 3pvc_A TRNA 5-methylaminomethy 24.7 54 0.0018 35.5 4.3 33 58-90 263-295 (689)
117 4gud_A Imidazole glycerol phos 24.6 39 0.0013 30.6 2.7 44 330-374 37-81 (211)
118 3c96_A Flavin-containing monoo 24.6 50 0.0017 32.7 3.7 31 59-89 4-35 (410)
119 3e1t_A Halogenase; flavoprotei 24.5 47 0.0016 34.4 3.6 29 60-88 8-36 (512)
120 1vdc_A NTR, NADPH dependent th 24.5 47 0.0016 31.4 3.4 30 60-89 9-38 (333)
121 3mcu_A Dipicolinate synthase, 24.3 67 0.0023 30.2 4.3 33 59-91 5-42 (207)
122 2c4w_A 3-dehydroquinate dehydr 24.3 56 0.0019 30.3 3.6 39 329-374 73-115 (176)
123 3jxp_A Coenzyme PQQ synthesis 24.3 2.3E+02 0.008 27.6 8.5 54 323-377 205-275 (321)
124 1uqr_A 3-dehydroquinate dehydr 24.2 38 0.0013 30.8 2.4 42 326-374 56-104 (154)
125 2hqm_A GR, grase, glutathione 24.1 47 0.0016 34.0 3.5 32 58-89 10-41 (479)
126 1onf_A GR, grase, glutathione 24.1 45 0.0015 34.5 3.4 36 60-96 3-38 (500)
127 3dje_A Fructosyl amine: oxygen 24.0 55 0.0019 32.6 3.9 31 59-89 6-37 (438)
128 3llv_A Exopolyphosphatase-rela 24.0 61 0.0021 26.9 3.7 31 59-89 6-36 (141)
129 3c4a_A Probable tryptophan hyd 24.0 37 0.0013 33.4 2.6 29 60-88 1-31 (381)
130 1fl2_A Alkyl hydroperoxide red 24.0 53 0.0018 30.7 3.6 29 60-88 2-30 (310)
131 3i3l_A Alkylhalidase CMLS; fla 23.9 45 0.0015 35.8 3.4 30 59-88 23-52 (591)
132 3cty_A Thioredoxin reductase; 23.7 52 0.0018 31.0 3.5 29 60-88 17-45 (319)
133 3vo2_A Putative uncharacterize 23.2 44 0.0015 32.3 3.0 24 58-81 157-180 (310)
134 3ic5_A Putative saccharopine d 23.2 48 0.0016 26.1 2.7 30 58-87 4-34 (118)
135 2bry_A NEDD9 interacting prote 23.1 54 0.0018 34.0 3.8 33 56-88 89-121 (497)
136 1ebd_A E3BD, dihydrolipoamide 23.0 51 0.0018 33.3 3.5 30 60-89 4-33 (455)
137 2xve_A Flavin-containing monoo 22.8 54 0.0018 33.6 3.7 25 60-84 3-30 (464)
138 3urh_A Dihydrolipoyl dehydroge 22.8 52 0.0018 33.7 3.6 30 59-88 25-54 (491)
139 3nks_A Protoporphyrinogen oxid 22.7 50 0.0017 33.2 3.3 30 59-88 2-33 (477)
140 2gv8_A Monooxygenase; FMO, FAD 22.6 55 0.0019 33.0 3.6 30 59-88 6-37 (447)
141 2eq6_A Pyruvate dehydrogenase 22.5 53 0.0018 33.5 3.5 29 60-88 7-35 (464)
142 3oz2_A Digeranylgeranylglycero 22.5 54 0.0018 31.4 3.4 28 61-88 6-33 (397)
143 3kd9_A Coenzyme A disulfide re 22.5 45 0.0015 33.7 2.9 25 59-83 3-27 (449)
144 3l4b_C TRKA K+ channel protien 22.5 51 0.0017 29.8 3.1 30 60-89 1-30 (218)
145 1ep3_B Dihydroorotate dehydrog 22.4 49 0.0017 31.0 3.0 32 59-90 110-144 (262)
146 1q77_A Hypothetical protein AQ 22.3 78 0.0027 25.8 3.9 37 324-371 98-137 (138)
147 3o0h_A Glutathione reductase; 22.2 48 0.0017 34.0 3.1 31 60-90 27-57 (484)
148 1q1r_A Putidaredoxin reductase 22.1 53 0.0018 33.2 3.4 26 59-84 4-29 (431)
149 2hmt_A YUAA protein; RCK, KTN, 22.1 69 0.0023 26.1 3.6 30 59-88 6-35 (144)
150 2cdu_A NADPH oxidase; flavoenz 22.1 43 0.0015 33.9 2.7 29 60-88 1-31 (452)
151 1zmd_A Dihydrolipoyl dehydroge 22.0 55 0.0019 33.3 3.5 30 59-88 6-35 (474)
152 2rc5_A Ferredoxin-NADP reducta 21.9 48 0.0016 31.9 2.9 24 58-81 164-187 (314)
153 2cnd_A NADH-dependent nitrate 21.9 40 0.0014 31.5 2.3 24 58-81 135-158 (270)
154 3tqq_A Methionyl-tRNA formyltr 21.8 1.3E+02 0.0045 29.7 6.1 38 58-95 1-38 (314)
155 3cwc_A Putative glycerate kina 21.6 57 0.0019 33.7 3.5 46 329-374 283-328 (383)
156 1fnb_A Ferredoxin-NADP+ reduct 21.5 50 0.0017 31.8 3.0 24 58-81 161-184 (314)
157 2q0l_A TRXR, thioredoxin reduc 21.4 61 0.0021 30.3 3.4 29 60-88 2-31 (311)
158 1umk_A B5R, NADH-cytochrome B5 21.4 39 0.0013 31.7 2.1 24 58-81 145-168 (275)
159 3nep_X Malate dehydrogenase; h 21.3 39 0.0013 33.5 2.1 48 329-377 65-120 (314)
160 2e1m_A L-glutamate oxidase; L- 21.3 65 0.0022 32.7 3.8 33 56-88 41-73 (376)
161 1pj5_A N,N-dimethylglycine oxi 21.2 70 0.0024 35.4 4.4 40 59-99 4-47 (830)
162 2jae_A L-amino acid oxidase; o 21.1 74 0.0025 32.2 4.3 32 57-88 9-40 (489)
163 3fvw_A Putative NAD(P)H-depend 21.1 1.6E+02 0.0056 26.2 6.2 73 324-401 58-143 (192)
164 1m6i_A Programmed cell death p 20.8 40 0.0014 34.9 2.2 29 59-87 11-41 (493)
165 2ywr_A Phosphoribosylglycinami 20.8 66 0.0023 30.0 3.5 49 60-109 2-54 (216)
166 3svl_A Protein YIEF; E. coli C 20.8 1.4E+02 0.0047 27.0 5.6 75 323-400 62-141 (193)
167 4fk8_A Ferredoxin--NADP reduct 20.6 46 0.0016 31.2 2.4 24 58-81 121-144 (271)
168 1cjc_A Protein (adrenodoxin re 20.6 50 0.0017 34.0 2.8 27 56-82 3-29 (460)
169 2uzz_A N-methyl-L-tryptophan o 20.6 45 0.0016 32.1 2.4 29 60-88 3-31 (372)
170 2v3a_A Rubredoxin reductase; a 20.6 79 0.0027 31.1 4.2 38 59-96 4-41 (384)
171 1c0p_A D-amino acid oxidase; a 20.5 65 0.0022 31.1 3.5 30 59-88 6-35 (363)
172 1ojt_A Surface protein; redox- 20.5 61 0.0021 33.2 3.5 29 60-88 7-35 (482)
173 4dgk_A Phytoene dehydrogenase; 20.5 54 0.0019 33.2 3.1 29 60-88 2-30 (501)
174 1vl0_A DTDP-4-dehydrorhamnose 20.3 58 0.002 30.3 3.0 33 56-88 8-42 (292)
175 1yc5_A NAD-dependent deacetyla 20.2 1.9E+02 0.0066 27.3 6.8 64 325-397 172-244 (246)
176 3lqk_A Dipicolinate synthase s 20.2 68 0.0023 29.9 3.4 44 323-366 138-189 (201)
177 3atr_A Conserved archaeal prot 20.1 57 0.0019 33.0 3.1 29 60-88 7-35 (453)
178 1cqx_A Flavohemoprotein; globi 20.1 66 0.0023 32.1 3.6 24 58-81 265-288 (403)
179 2a8x_A Dihydrolipoyl dehydroge 20.1 64 0.0022 32.7 3.5 29 60-88 4-32 (464)
180 3ab1_A Ferredoxin--NADP reduct 20.1 67 0.0023 30.9 3.5 30 59-88 14-43 (360)
181 1pjq_A CYSG, siroheme synthase 20.0 53 0.0018 34.1 2.9 35 57-91 10-44 (457)
182 4a5l_A Thioredoxin reductase; 20.0 61 0.0021 30.2 3.2 32 58-89 151-182 (314)
No 1
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=100.00 E-value=3.7e-82 Score=641.99 Aligned_cols=317 Identities=26% Similarity=0.377 Sum_probs=281.5
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHHHHHHhcCCCChhHHHHHHHhc
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDESTPEALAVRRLLG 136 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGGSSG~LR~~~g~~~~GDiR~~l~aLa~~~~~~~~~l~~Lf~ 136 (485)
.++||||+||||||++++++|||+++.++|+||||+|||||||+||++||+++||||||||++||+.++ .+.+||+
T Consensus 2 ~~~~kiv~lgGGtGl~~ll~gL~~~~~~iT~IVtv~DdGgssG~LR~~~~~~~pGDir~~l~aLa~~~~----~~~~L~~ 77 (323)
T 2o2z_A 2 MKKKNVIVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLVALSEVEP----LLEQLFQ 77 (323)
T ss_dssp CCCEEEEEEECSHHHHHHHHHHTTSSEEEEEEECCCCCSHHHHHHHHHHTSCCCHHHHHHHHHHCCCCH----HHHHHHH
T ss_pred CCCCeEEEECCcccHHHHHHHHHhcCCCeEEEEECCcCCccchhhHhhcCCCCCchHHHHHHHhCCCcH----HHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999864 6899999
Q ss_pred CcCCCChhhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcCCcCchhHHHHHHHHHHhcCCHHHH
Q 011440 137 HRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAA 216 (485)
Q Consensus 137 ~Rf~~~~~~~~~ew~~i~~G~h~lw~~l~~~~~~~ir~~l~~f~~eil~~~~~~~dl~ghsiGNL~lag~~~~~gsl~~A 216 (485)
|||+. ++||++||+|||||+|++.+.|+|.+|
T Consensus 78 ~Rf~~------------------------------------------------~~dlagh~~GNl~L~al~~~~g~~~~a 109 (323)
T 2o2z_A 78 HRFEN------------------------------------------------GNGLSGHSLGNLLLAGMTSITGDFARG 109 (323)
T ss_dssp CBCCC------------------------------------------------C-CCTTCBHHHHHHHHHHHHHTCHHHH
T ss_pred hCCCC------------------------------------------------CCccccCcHHHHHHHHHHHccCCHHHH
Confidence 99974 368999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCEEEeCccCCCceEEEEEEcCCcEEeeeeeecCCCCCCCCccccccccCCCCcccccEEEEecCCCC
Q 011440 217 IFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGS 296 (485)
Q Consensus 217 i~~~s~~lgi~~~g~VlP~~~T~~~v~L~a~l~dG~~v~GE~~I~~~~~~~~~~v~k~~~~~~~~~~~I~rv~l~~~~~~ 296 (485)
|+.+|++++|+ ++|+|| |+++++|+|+++||++++||++|+++ ..+|++|||.+.
T Consensus 110 i~~~~~~l~v~--g~VlP~--s~~~v~l~a~~~dG~~v~ge~~I~~~------------------~~~i~~v~~~p~--- 164 (323)
T 2o2z_A 110 ISEMSKVLNVR--GKVLPA--SNRSIILHGEMEDGTIVTGESSIPKA------------------GKKIKRVFLTPK--- 164 (323)
T ss_dssp HHHHHHHTTCS--SEEEES--CSSCCEEEEEETTSCEEESTTTGGGG------------------CSCEEEEEEEST---
T ss_pred HHHHHHHhCCC--CEEEcC--CCCceEEEEEECCCCEEEEeEcccCC------------------CCCceEEEEeCC---
Confidence 99999999998 899999 89999999999999999999999873 579999999863
Q ss_pred cchhHHHHHHhHhhhhcccccccCCCCCHHHHHHHhcCCEEEEcCCCccccccccccchhHHHHHhcCCCCEEEEeCC-C
Q 011440 297 NLLHEVIAVVLFYWFSYLTQQMVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVLLGIGEIISSRSCPKVLLLNG-L 375 (485)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~al~AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~~s~a~kV~I~Nl-t 375 (485)
+|+++|+|++||++||+||||||||||||+|||+++||++||++++||||||||+ +
T Consensus 165 -----------------------~~~~~p~~l~AI~~AD~IvlgPGS~~TSI~P~Llv~gi~~Ai~~s~A~kV~v~Nl~t 221 (323)
T 2o2z_A 165 -----------------------DTKPLREGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKVYICNVMT 221 (323)
T ss_dssp -----------------------TCCCCHHHHHHHHHCSEEEECSSCTTTTHHHHHTSTTHHHHHHHCCSEEEEECCSBC
T ss_pred -----------------------CCCCCHHHHHHHHhCCEEEECCCCCHHHhcccccCchHHHHHHhCCCCEEEEcCCCC
Confidence 5889999999999999999999999999999999999999999999999999999 8
Q ss_pred CCCcCCCCCHHHHHHHHHHHhcccCCCCCC-CCCCCccccceeeeecCCCCcccCHHHHHhCCCEEEEeccceecCCCCC
Q 011440 376 EDRETSGFSASCFVTAITDALNRAYGDPQK-SLKNSPSQYINTILVPEDGEIPLDIQCLASQGIFDVITVHSICDPKVGI 454 (485)
Q Consensus 376 ~dgET~g~sa~d~v~al~~~lg~~~~~~~~-~~~~~~~~~l~~~~~d~~~~v~~D~~~L~~~Gi~~vi~~~~l~~~~~~~ 454 (485)
|+|||+||+++||++++.+|++....|.++ +....+.++++.|.-+...++.+|.+.++++|+++ +..+.++..+...
T Consensus 222 q~GET~g~s~~dhv~ai~~~~~~~~iD~vlv~~~~~~~~~~~~Y~~~~~~pv~~d~~~l~~~G~~v-i~~~l~~~~~~~~ 300 (323)
T 2o2z_A 222 QNGETDGYTASDHLQAIMDHCGVGIVDDILVHGEPISDTVKAKYAKEKAEPVIVDEHKLKALGVGT-ISDYFVLEQDDVL 300 (323)
T ss_dssp CTTTSTTCCHHHHHHHHHHHHCSSSCSEEEEECSCCCHHHHHHHHTTTCCBCCCCHHHHHHTTCEE-EEECCEEEC--CE
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCCCCcEEEECCCcCCHHHHHHHHhcCCCccccCHHHHHhCCCEE-EEecccccCCCCC
Confidence 999999999999999999999987777654 44456778888764333346788999999999994 5788777654668
Q ss_pred ccCHHHHHHHHHHHHhhccc
Q 011440 455 IFDPKSLIQAIADLLGRHMK 474 (485)
Q Consensus 455 rhD~~~La~aL~~l~~~~~~ 474 (485)
+||+++|+++|++++.+...
T Consensus 301 rhD~~~La~al~~l~~~~~~ 320 (323)
T 2o2z_A 301 RHNASKVSEAILEGKPRTSS 320 (323)
T ss_dssp EECHHHHHHHHHC-------
T ss_pred ccCHHHHHHHHHHHHhhccc
Confidence 99999999999999987543
No 2
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=100.00 E-value=3.4e-81 Score=636.19 Aligned_cols=317 Identities=25% Similarity=0.364 Sum_probs=287.6
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHHHHHHhcCCCChhHHHHHHHhcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDESTPEALAVRRLLGH 137 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGGSSG~LR~~~g~~~~GDiR~~l~aLa~~~~~~~~~l~~Lf~~ 137 (485)
++||||+||||||++++++|||+++.++|+||||+|||||||+||++||+++||||||||++||+.++ .+.+||+|
T Consensus 3 ~~~kIv~lgGGtGl~~ll~gLk~~~~~iTaIVtv~DDGGSsG~LR~~~g~~~pGDiR~~l~aLa~~~~----~~~~L~~~ 78 (332)
T 2ppv_A 3 KQMNVVLIGGGTGLSVLARGLREFPIDITAIVTVADNGGSTGKIRDVMDIPAPGDIRNVIAALSDSES----ILTQLFQY 78 (332)
T ss_dssp CCEEEEEEECHHHHHHHHHHHTTSSEEEEEEECCCCCSHHHHHHHHHSCCCCCHHHHHHHHHTSCTTS----HHHHHHTC
T ss_pred CCCeEEEEcCcccHHHHHHHHHhCCCCeEEEEECCcCCccchhHHHhcCCCCCchHHHHHHHhCCCcH----HHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999999999999876 68999999
Q ss_pred cCCCChhhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcCCcCchhHHHHHHHHHHhcCCHHHHH
Q 011440 138 RLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAI 217 (485)
Q Consensus 138 Rf~~~~~~~~~ew~~i~~G~h~lw~~l~~~~~~~ir~~l~~f~~eil~~~~~~~dl~ghsiGNL~lag~~~~~gsl~~Ai 217 (485)
||+. .||++||+|||||++++.++|+|.+||
T Consensus 79 Rf~~-------------------------------------------------gdlagH~~GNl~L~al~~~~g~~~~ai 109 (332)
T 2ppv_A 79 RFGE-------------------------------------------------NQVDGHSLGNLVIAGMTNITNDFGHAI 109 (332)
T ss_dssp BCCT-------------------------------------------------TSGGGCBHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCC-------------------------------------------------CccccccHHHHHHHHHHHhcCCHHHHH
Confidence 9963 179999999999999999999999999
Q ss_pred HHHHhhcCCCCCCEEEeCccCCCceEEEEEEcCCcEEeeeeeecCCCCCCCCccccccccCCCCcccccEEEEecCCCCc
Q 011440 218 FLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSN 297 (485)
Q Consensus 218 ~~~s~~lgi~~~g~VlP~~~T~~~v~L~a~l~dG~~v~GE~~I~~~~~~~~~~v~k~~~~~~~~~~~I~rv~l~~~~~~~ 297 (485)
+.+|++++|+ ++|+|| |+++++|+|+++||++++||++|++. +++|++|||.+.
T Consensus 110 ~~~~~~l~v~--g~VlP~--s~~~v~l~a~~~dG~~v~Ge~~I~~~------------------~~~i~~v~l~p~---- 163 (332)
T 2ppv_A 110 KELSKVLNIK--GQVIPS--TNASVQLNAVMEDGEIVHGETNIPKT------------------HKKIDRVFLEPS---- 163 (332)
T ss_dssp HHHHHHTTCS--SEEEES--CSSCCEEEEEETTSCEEESTTTSSSS------------------CSCEEEEEEESC----
T ss_pred HHHHHHhCCC--CEEECC--CCCceEEEEEECCCCEEEEeeeccCC------------------CCCceEEEEeCC----
Confidence 9999999998 899999 89999999999999999999999873 679999999874
Q ss_pred chhHHHHHHhHhhhhcccccccCCCCCHHHHHHHhcCCEEEEcCCCccccccccccchhHHHHHhcCCCCEEEEeCC-CC
Q 011440 298 LLHEVIAVVLFYWFSYLTQQMVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVLLGIGEIISSRSCPKVLLLNG-LE 376 (485)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~p~~~p~al~AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~~s~a~kV~I~Nl-t~ 376 (485)
+|+++|+|++||++||+||||||||||||+|||+++||++||++++||||||||+ +|
T Consensus 164 ----------------------~~~~~p~~l~AI~~AD~IvlgPGS~~TSI~P~Llv~gi~~Ai~~s~A~kV~v~N~~~~ 221 (332)
T 2ppv_A 164 ----------------------DVEPMNEAIEALEQADLIVLGPGSLYTSVISNLCVKGISEALLRTSAPKLYVSNVMTQ 221 (332)
T ss_dssp ----------------------CCCCCHHHHHHHHHCSEEEECSSCCCCCCHHHHTSHHHHHHHHHCCSCEEEECCSBCC
T ss_pred ----------------------CCCCCHHHHHHHHhCCEEEECCCCCHHHhcccccCchHHHHHHhCCCCEEEEcCCCCC
Confidence 5889999999999999999999999999999999999999999999999999999 89
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCC-CCCCCccccceeeeecCCCCcccCHHHHHhCCCEEEEeccc-eecCCC-C
Q 011440 377 DRETSGFSASCFVTAITDALNRAYGDPQK-SLKNSPSQYINTILVPEDGEIPLDIQCLASQGIFDVITVHS-ICDPKV-G 453 (485)
Q Consensus 377 dgET~g~sa~d~v~al~~~lg~~~~~~~~-~~~~~~~~~l~~~~~d~~~~v~~D~~~L~~~Gi~~vi~~~~-l~~~~~-~ 453 (485)
+|||+||+++||++++.+|++....|.++ +....+.+++.+|..+...++.+|.+.++++|+++ +..+. +...+. .
T Consensus 222 ~GEt~g~s~~dhv~ai~~~~~~~~~D~vlv~~~~~p~~~~~~y~~~g~~pv~~D~~~l~~~g~~v-i~~~l~~~~~~~~~ 300 (332)
T 2ppv_A 222 PGETDNYDVKEHIDALTRQVGEPFIDFVICSSESYSKDVLQRYEEKNSKPVAVHKEQLKDSGIRV-LTASNLVEISNEHY 300 (332)
T ss_dssp TTTCTTCCHHHHHHHHHHHHSSCCCCEEECCCCCCCHHHHHHHHHTTCCBCCCCHHHHHHTTCEE-ECCTTSEEECTTSC
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCCCCEEEECCCcCCHHHHHHHHhcCCCccccCHHHHHhCCCEE-EEeeceeeccCCCC
Confidence 99999999999999999999987667654 44556778888775555557889999999999995 57776 443334 6
Q ss_pred CccCHHHHHHHHHHHHhhccccc
Q 011440 454 IIFDPKSLIQAIADLLGRHMKTT 476 (485)
Q Consensus 454 ~rhD~~~La~aL~~l~~~~~~~~ 476 (485)
.|||+++||++|++++.+...+.
T Consensus 301 ~rHD~~~La~al~~l~~~~~~~~ 323 (332)
T 2ppv_A 301 VRHNTKVLSKMIYELALELTSTI 323 (332)
T ss_dssp EEECHHHHHHHHHHHHHHHTSCC
T ss_pred cccCHHHHHHHHHHHHHHhCccc
Confidence 89999999999999998765443
No 3
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=100.00 E-value=1e-81 Score=640.68 Aligned_cols=316 Identities=23% Similarity=0.332 Sum_probs=276.6
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCcchHHHHHHc-CCCCCCcHHHHHHHhcCCCChhHHHHHHHhc
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVL-GGPAVGDIRSRCLRLSDESTPEALAVRRLLG 136 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGGSSG~LR~~~-g~~~~GDiR~~l~aLa~~~~~~~~~l~~Lf~ 136 (485)
++||||+||||||++++++|||+++.++|+||||+|||||||+||++| |++|||||||||++||+.++ .+.+||+
T Consensus 3 ~~~~IV~igGGtGl~~ll~gLk~~~~~iTaIVtvaDDGGSsG~LR~~~~~i~~pGDiRn~L~aLa~~~~----~~~~L~~ 78 (326)
T 2q7x_A 3 RXPXITVIGGGTGSPVILXSLREXDVEIAAIVTVADDGGSSGELRXNMQQLTPPGDLRNVLVAMSDMPX----FYEXVFQ 78 (326)
T ss_dssp CCCEEEEECCCTTHHHHHHHHHHSSCEEEEEECCBSCGGGGSSCTTTCC----CHHHHHHHHHTSSCHH----HHHHHTT
T ss_pred CCCeEEEEcCcccHHHHHHHhccCCCCeEEEEECccCCccceeehhhhcCCCCccHHHHHHHHhCCCch----HHHHHHH
Confidence 579999999999999999999999999999999999999999999999 99999999999999999853 7999999
Q ss_pred CcCCCChhhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcCCcCchhHHHHHHHHHHhcCCHHHH
Q 011440 137 HRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAA 216 (485)
Q Consensus 137 ~Rf~~~~~~~~~ew~~i~~G~h~lw~~l~~~~~~~ir~~l~~f~~eil~~~~~~~dl~ghsiGNL~lag~~~~~gsl~~A 216 (485)
|||+.+ +.+|++||+|||||+|++.+.|+|.+|
T Consensus 79 yRf~~~-----------------------------------------------d~~lagHs~GNl~Laal~~~~G~~~~a 111 (326)
T 2q7x_A 79 YRFSED-----------------------------------------------AGAFAGHPLGNLIIAGLSEMQGSTYNA 111 (326)
T ss_dssp CBCCC---------------------------------------------------CCSCBTTHHHHHHHHHHHSSHHHH
T ss_pred cCCCCC-----------------------------------------------CcccccCCHHHHHHHHHHHhcCCHHHH
Confidence 999741 235999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCEEEeCccCCCceEEEEEEcCCcEEeeeeeecCCCCCCCCccccccccCCCCcccccEEEE-ecCCC
Q 011440 217 IFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFY-MSSEG 295 (485)
Q Consensus 217 i~~~s~~lgi~~~g~VlP~~~T~~~v~L~a~l~dG~~v~GE~~I~~~~~~~~~~v~k~~~~~~~~~~~I~rv~l-~~~~~ 295 (485)
|+.+|++++|+ ++|+|| |+++++|+|+++||++++||++|++. ..+|++||| .+..
T Consensus 112 i~~~~~~l~v~--g~VlP~--t~~~v~l~A~~~dG~~v~GE~~I~~~------------------~~~I~~v~l~~p~~- 168 (326)
T 2q7x_A 112 MQLLSXFFHTT--GXIYPS--SDHPLTLHAVFQDGTEVAGESHIVDH------------------RGIIDNVYVTNALN- 168 (326)
T ss_dssp HHHHHHHHTCC--SEEEES--BSSCEEEEEEETTSCEEESHHHHHHS------------------CSCEEEEEEEESSC-
T ss_pred HHHHHHHhCCC--eeEeec--CCCceeEEEEecCCceEeeeeecccC------------------CCCceEEEEeCCCC-
Confidence 99999999998 899999 89999999999999999999999973 579999999 5531
Q ss_pred CcchhHHHHHHhHhhhhcccccccCCCCCHHHHHHHhcCCEEEEcCCCccccccccccchhHHHHHhcCCCCEEEEeCC-
Q 011440 296 SNLLHEVIAVVLFYWFSYLTQQMVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVLLGIGEIISSRSCPKVLLLNG- 374 (485)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~al~AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~~s~a~kV~I~Nl- 374 (485)
+. .|+|+|+|++||++||+||||||||||||+|||++|||++||++++||||||||+
T Consensus 169 -----~~-----------------~~~a~p~al~AI~~AD~IvlgPGSl~TSI~P~Llv~gi~~Ai~~s~A~kV~v~Nlm 226 (326)
T 2q7x_A 169 -----DD-----------------TPLASRRVVQTILESDMIVLGPGSLFTSILPNIVIXEIGRALLETXAEIAYVCNIM 226 (326)
T ss_dssp -----SS-----------------CCCBCSHHHHHHHHCSEEEECSSCCCCCCHHHHTSHHHHHHHHHCSSEEEEECCSB
T ss_pred -----CC-----------------CCCCCHHHHHHHHhCCEEEECCCCCHHHHhhhhhhccHHHHHHhccCceEEeccCc
Confidence 11 5889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHhcccCCCCCC-CCCCCccccc--eeeeecCCCCcccCHHHHHhCCCEEEEeccceecCC
Q 011440 375 LEDRETSGFSASCFVTAITDALNRAYGDPQK-SLKNSPSQYI--NTILVPEDGEIPLDIQCLASQGIFDVITVHSICDPK 451 (485)
Q Consensus 375 t~dgET~g~sa~d~v~al~~~lg~~~~~~~~-~~~~~~~~~l--~~~~~d~~~~v~~D~~~L~~~Gi~~vi~~~~l~~~~ 451 (485)
+|+|||+||+++||++++.+|++....|.++ +....+.+++ ..|.- +..+|.+|.+.++++|+++ +..++++..+
T Consensus 227 ~~~GEt~g~s~~dhv~~i~~~~~~~~~D~vlv~~~~~~~~~~~~~~y~~-~~~~v~~d~~~l~~~G~~v-i~~~~~~~~~ 304 (326)
T 2q7x_A 227 TQRGETEHFTDSDHVEVLHRHLGRPFIDTVLVNIEXVPQEYMNSNRFDE-YLVQVEHDFVGLCXQVSRV-ISSNFLRLEN 304 (326)
T ss_dssp CCTTSCTTCCHHHHHHHHHHHHSSCCCSEEEEECSCCCHHHHHHTTCCT-TCCBCCCCHHHHHHHCSEE-EEECCEEEET
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCCCCEEEECCCCCchhhhhhhhhhh-cCCccccCHHHHhhcCCEE-EEecccccCC
Confidence 8999999999999999999999987777654 3444566666 44422 2234788999999999994 6888877545
Q ss_pred CCCccCHHHHHHHHHHHHhh
Q 011440 452 VGIIFDPKSLIQAIADLLGR 471 (485)
Q Consensus 452 ~~~rhD~~~La~aL~~l~~~ 471 (485)
...+||+++||++|++++.+
T Consensus 305 ~~~rhD~~~La~al~~l~~~ 324 (326)
T 2q7x_A 305 GGAFHDGDLIVDELMRIIQV 324 (326)
T ss_dssp TEEEECHHHHHHHHHHHCCC
T ss_pred CCCccCHHHHHHHHHHHHHh
Confidence 66899999999999998854
No 4
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=100.00 E-value=7e-82 Score=644.68 Aligned_cols=318 Identities=25% Similarity=0.374 Sum_probs=214.5
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHHHHHHhcCCCChhHHHHHHHhc
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDESTPEALAVRRLLG 136 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGGSSG~LR~~~g~~~~GDiR~~l~aLa~~~~~~~~~l~~Lf~ 136 (485)
.++||||+||||||++++++|||+++.++|+||||+|||||||+||++||++|||||||||++||+.++ .+.+||+
T Consensus 8 ~~~~kIVvigGGtGl~~ll~gLk~~~~~iTaIVtvaDDGGSSG~lR~~~g~~~pGDiRn~L~aLa~~~~----~~~~L~~ 83 (341)
T 2p0y_A 8 TQRPKIVVIGGGTGLPVVLNGLRKQAVDITAVVTVADDGGSSGIIRNYVNVVPPGDIRNVMVALSSWPD----LYKDIFQ 83 (341)
T ss_dssp --CCEEEEECCGGGHHHHHHHHHHSSSEEEEECC----------------------CHHHHHHHCCCCS----HHHHHTC
T ss_pred cCCCeEEEECCcccHHHHHHHHHhCCCCeEEEEECCcCCccceeHHhhcCCCCCcHHHHHHHHhCCCcH----HHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999876 6999999
Q ss_pred CcCCCChhhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcCCcCchhHHHHHHHHHHhcCCHHHH
Q 011440 137 HRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAA 216 (485)
Q Consensus 137 ~Rf~~~~~~~~~ew~~i~~G~h~lw~~l~~~~~~~ir~~l~~f~~eil~~~~~~~dl~ghsiGNL~lag~~~~~gsl~~A 216 (485)
|||+.+ +.+|+|||+|||||+|++.+.|+|.+|
T Consensus 84 yRf~~g-----------------------------------------------d~~lagHs~GNL~Laal~~~~G~~~~a 116 (341)
T 2p0y_A 84 YRFQGD-----------------------------------------------DQFFAGHAIGNLIIAALTEMKSGVFDA 116 (341)
T ss_dssp --------------------------------------------------------------CCCC---------CHHHH
T ss_pred cCCCCC-----------------------------------------------CcccccCCHHHHHHHHHHHhcCCHHHH
Confidence 999741 235999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCEEEeCccCCCceEEEEEEcCCcEEeeeeeecCCCCCCCCccccccccCCCCcccccEEEEecCCCC
Q 011440 217 IFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGS 296 (485)
Q Consensus 217 i~~~s~~lgi~~~g~VlP~~~T~~~v~L~a~l~dG~~v~GE~~I~~~~~~~~~~v~k~~~~~~~~~~~I~rv~l~~~~~~ 296 (485)
|+.+|++++|+ ++|+|| |+++++|+|+++||++++||++|++ .+++|++|||.+.+
T Consensus 117 i~~~~~~l~v~--g~VlP~--t~~~v~L~A~~~dG~~v~GE~~I~~------------------~~~~I~~v~l~p~~-- 172 (341)
T 2p0y_A 117 VQELSNMMQVD--GHVYPA--ANEALTLHGKFSDGTELVGEAEITA------------------AHKSLERVWVTDKN-- 172 (341)
T ss_dssp HHHHHHHTTCS--SEEECC------CCEEECCSSCC-----------------------------CCCCCCEEEC-----
T ss_pred HHHHHHHhCCC--CEEEcC--CCCceEEEEEECCCCEEEEeEeccC------------------CCCCceEEEEeCCC--
Confidence 99999999998 899999 8999999999999999999999987 26799999997642
Q ss_pred cchhHHHHHHhHhhhhcccccccCCCCCHHHHHHHhcCCEEEEcCCCccccccccccchhHHHHHhcCCCCEEEEeCC-C
Q 011440 297 NLLHEVIAVVLFYWFSYLTQQMVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVLLGIGEIISSRSCPKVLLLNG-L 375 (485)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~al~AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~~s~a~kV~I~Nl-t 375 (485)
++ .|+|+|+|++||++||+||||||||||||+|||++|||++||++++||||||||+ +
T Consensus 173 ----~~-----------------~~~a~p~al~AI~~AD~IvlgPGSlyTSI~P~Llv~gi~~Ai~~s~A~kV~V~Nlm~ 231 (341)
T 2p0y_A 173 ----GK-----------------EPQAVQPVIDAIMAADQIVLGPGSLFTSILPNLTIGNIGRAVCESDAEVVYICNIMT 231 (341)
T ss_dssp ------------------------CCCCHHHHHHHHHCSEEEECSSCCCCCCHHHHSSHHHHHHHHHCSSEEEEECCSBC
T ss_pred ----CC-----------------CCCCCHHHHHHHHhCCEEEECCCCCHHHhcccccCccHHHHHHhCCCCEEEEeCCCC
Confidence 22 4889999999999999999999999999999999999999999999999999999 8
Q ss_pred CCCcCCCCCHHHHHHHHHHHhcccCCCCCC-CCCCCccccc--eeeeecCCCCcccCHHHHHhCCCEEEEeccceecCCC
Q 011440 376 EDRETSGFSASCFVTAITDALNRAYGDPQK-SLKNSPSQYI--NTILVPEDGEIPLDIQCLASQGIFDVITVHSICDPKV 452 (485)
Q Consensus 376 ~dgET~g~sa~d~v~al~~~lg~~~~~~~~-~~~~~~~~~l--~~~~~d~~~~v~~D~~~L~~~Gi~~vi~~~~l~~~~~ 452 (485)
|+|||+||+++||++++.+|++....|.++ +....+.+++ .+|.-. ...|.+|.+.++++|+++ +..++++..+.
T Consensus 232 ~~GEt~g~s~~dhv~ai~~~~~~~~iD~vlvd~~~~~~~~~~~~~y~~~-~~~v~~d~~~l~~~G~~v-i~~~l~~~~~~ 309 (341)
T 2p0y_A 232 QKGETDNFSDADHVRVLNRHLGQNFINTVLVNTEKVPEDYMDFHKFNEV-SKQVSHDFRGLREQNCRV-ISSNFLKLRDN 309 (341)
T ss_dssp --CCSTTCBHHHHHHHHHHTC----CCEEEEECSCCCHHHHHHC------CCBCBCCHHHHHTTTCEE-EEECCCCC---
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCCCCCEEEECCCCCchhhhhhhhhhhc-CCccccCHHHHHhCCCEE-EEecccccCCC
Confidence 999999999999999999999987767654 3444566666 444322 234788999999999994 68887776556
Q ss_pred CCccCHHHHHHHHHHHHhhc
Q 011440 453 GIIFDPKSLIQAIADLLGRH 472 (485)
Q Consensus 453 ~~rhD~~~La~aL~~l~~~~ 472 (485)
..+||+++||++|++++...
T Consensus 310 ~~rhD~~~La~al~~l~~~~ 329 (341)
T 2p0y_A 310 GAFHDGDQVVAELMNLVGHS 329 (341)
T ss_dssp ---CCSHHHHHHHHHHHHHC
T ss_pred CCccCHHHHHHHHHHHHHhh
Confidence 68999999999999999753
No 5
>3c3d_A 2-phospho-L-lactate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FO1; 2.50A {Methanosarcina mazei GO1} PDB: 2ffe_A* 3c3e_A* 3cgw_A
Probab=100.00 E-value=1.8e-66 Score=524.71 Aligned_cols=281 Identities=16% Similarity=0.178 Sum_probs=240.9
Q ss_pred EEEEeCCcchhHHHHHHHc--CCCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHHHHHHhcCCCChh------H---HH
Q 011440 62 LLVFSGGTAFNGVVEELKN--ITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDESTPE------A---LA 130 (485)
Q Consensus 62 IVv~gGGTG~~~ll~gLk~--~~~~lt~IVtv~DDGGSSG~LR~~~g~~~~GDiR~~l~aLa~~~~~~------~---~~ 130 (485)
||+||||||++++++|||+ ++.++|+||||+|||||||++ + |||||||||+||+..+.+ + ..
T Consensus 1 iv~lgGGtGl~~ll~gLk~~~~~~~itaIVtvaDDGgssG~l-----v--~PDir~~l~aLa~~~~~e~~~g~~gdt~~~ 73 (311)
T 3c3d_A 1 MIIFSGGTGTPKLLDGLKEILPEEELTVVVNTAEDLWVSGNL-----I--SPDLDTVLYLFSDQIDRKRWWGIENDTFGT 73 (311)
T ss_dssp CEEEECTTHHHHHHHHHTTTSCGGGCEEEECCTTCEEETTEE-----E--CHHHHHHHHHTTTCBCTTTTSSBTTCCCHH
T ss_pred CEEEeCcccHHHHHHHHHhCCCCCCeEEEEECCcCCccccCc-----c--CccHHHHHHHhCCCccccccccccCchHHH
Confidence 6999999999999999998 689999999999999999996 2 339999999999985431 1 45
Q ss_pred HHHHhcCcCCCChhhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcCCcCchhHHHHHHHHHHhc
Q 011440 131 VRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFF 210 (485)
Q Consensus 131 l~~Lf~~Rf~~~~~~~~~ew~~i~~G~h~lw~~l~~~~~~~ir~~l~~f~~eil~~~~~~~dl~ghsiGNL~lag~~~~~ 210 (485)
|.+||+|||.. | | ..++|||++||+||+||++ .
T Consensus 74 ~~~L~~~rf~~-------------------~-----------------~-------~~gd~dlagH~~gNl~L~a----~ 106 (311)
T 3c3d_A 74 YERMKELGIEE-------------------G-----------------L-------KLGDRDRATHIIRSNIIRD----G 106 (311)
T ss_dssp HHHHHHTTCCC-------------------S-----------------S-------CCCHHHHHHHHHHHHHHHT----T
T ss_pred HHHHHHhcCcc-------------------c-----------------c-------cCCCcccccChHHHHHHHc----c
Confidence 67777777642 1 1 1346899999999999999 4
Q ss_pred CCHHHHHHHHHhhcCCCCCCEEEeCccCCCceEEEEEEcCCcEEeeeeeecCCCCCCCCccccccccCCCCcccccEEEE
Q 011440 211 QSLDAAIFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFY 290 (485)
Q Consensus 211 gsl~~Ai~~~s~~lgi~~~g~VlP~~~T~~~v~L~a~l~dG~~v~GE~~I~~~~~~~~~~v~k~~~~~~~~~~~I~rv~l 290 (485)
++|.+||+.+|++++|+ ++|+|| |+++++|.|+++||++++||++|+++. .++|++|||
T Consensus 107 ~~l~~ai~~~~~~l~v~--g~VlP~--s~~~v~l~a~~~dG~~v~ge~~I~~~~-----------------~~~I~~v~l 165 (311)
T 3c3d_A 107 ASLTDSTVKLSSLFGIK--ANILPM--SDDPVSTYIETAEGIMHFQDFWIGKRG-----------------EPDVRGVDI 165 (311)
T ss_dssp CCHHHHHHHHHHHHTCC--SEEEES--CSSCCEEEEEESSCEEEHHHHHTTSTT-----------------CSCEEEEEE
T ss_pred CCHHHHHHHHHHHhCCC--CEEECC--CCCceEEEEEECCCCEEEEeeccCCCC-----------------CCCeeEEEE
Confidence 79999999999999998 899999 899999999999999999999998742 469999999
Q ss_pred ecCCCCcchhHHHHHHhHhhhhcccccccCCCCCHHHHHHHhcCCEEEEcCCCccccccccccchhHHHHHhcCCCCEEE
Q 011440 291 MSSEGSNLLHEVIAVVLFYWFSYLTQQMVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVLLGIGEIISSRSCPKVL 370 (485)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~al~AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~~s~a~kV~ 370 (485)
.+.+ .|+|+|+|++||++||+||||||||||||+|||+++||++||+++ ||||
T Consensus 166 ~~~~-------------------------~~~a~p~vl~AI~~AD~IvlgPGS~~TSI~P~Llv~gi~~Al~~s--~kV~ 218 (311)
T 3c3d_A 166 RGVS-------------------------EASISPKVLEAFEKEENILIGPSNPITSIGPIISLPGMRELLKKK--KVVA 218 (311)
T ss_dssp ETTT-------------------------TCCCCHHHHHHHHHCCEEEECSSCTTTTSHHHHHSTTHHHHHHTS--EEEE
T ss_pred cCcc-------------------------CCCCCHHHHHHHHhCCEEEECCCCCHHHHhhhcCchhHHHHHHcC--CEEE
Confidence 8632 588999999999999999999999999999999999999999999 9999
Q ss_pred EeC-------------C-CCCC-cCCCCCHHHHHHHHHHHhcccCCCCCCCCCCCccccceeeeecCCCCcccCHHHHHh
Q 011440 371 LLN-------------G-LEDR-ETSGFSASCFVTAITDALNRAYGDPQKSLKNSPSQYINTILVPEDGEIPLDIQCLAS 435 (485)
Q Consensus 371 I~N-------------l-t~dg-ET~g~sa~d~v~al~~~lg~~~~~~~~~~~~~~~~~l~~~~~d~~~~v~~D~~~L~~ 435 (485)
||| + +|+| ||+++++.+|++ +++|.+++|..+ ..|.+.+++
T Consensus 219 v~n~i~~~~~~Gpa~~~m~~~G~et~~~~v~~h~~----------------------~~lD~vlvd~~~--~~d~~~~~~ 274 (311)
T 3c3d_A 219 VSPIIGNAPVSGPAGKLMPACGIEVSSMGVAEYYQ----------------------DFLDVFVFDERD--RADEFAFER 274 (311)
T ss_dssp ECCEETTEESSSTHHHHTGGGTCCSSHHHHHHHHT----------------------TTCCEEEEEGGG--CCCHHHHHH
T ss_pred EccCcCCcccccchhhcccCCCCcCchhHHHHHhh----------------------ccCCEEEECCCc--cccHHHHHh
Confidence 999 4 7888 788776666654 346777887764 368889999
Q ss_pred CCCEEEEeccceecCCCCCccCHHHHHHHHHHHHhhcc
Q 011440 436 QGIFDVITVHSICDPKVGIIFDPKSLIQAIADLLGRHM 473 (485)
Q Consensus 436 ~Gi~~vi~~~~l~~~~~~~rhD~~~La~aL~~l~~~~~ 473 (485)
+|++ |+..+++|+. +||+++||+++++++..+.
T Consensus 275 ~G~~-vi~~~~~~~~----~hd~~~LA~al~~l~~~~~ 307 (311)
T 3c3d_A 275 LGCH-ASRADTLMTS----TEKSKELAEIVVQAFLEHH 307 (311)
T ss_dssp HTCE-EEEECCCCCS----HHHHHHHHHHHHHHHHHC-
T ss_pred CCCE-EEEeccccCC----ccCHHHHHHHHHHHHHhcc
Confidence 9999 5688887653 9999999999999997753
No 6
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=72.10 E-value=1.8 Score=45.61 Aligned_cols=33 Identities=12% Similarity=0.297 Sum_probs=28.3
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
+..+||||++|||.|.-.+++.|++...++|.|
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLI 71 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSII 71 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEE
Confidence 345789999999999999999998877787776
No 7
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=67.17 E-value=4.7 Score=40.13 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=24.6
Q ss_pred CCCeEEEEeCCcc-----hhHHHHHHHcCCCCeEEE
Q 011440 58 TQPSLLVFSGGTA-----FNGVVEELKNITTRVAHV 88 (485)
Q Consensus 58 ~~~~IVv~gGGTG-----~~~ll~gLk~~~~~lt~I 88 (485)
+.+||++-+|||| +-.+++.|++.+++++.|
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~v 36 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWL 36 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 3579999999998 356889999988888765
No 8
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=63.11 E-value=4.4 Score=40.30 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=26.4
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCC--eEEEEeCCC
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTR--VAHVLPVSD 93 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~--lt~IVtv~D 93 (485)
|+|||++|||.|.-..+..|++...+ +|.| .-.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtli-e~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLI-EPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEE-CSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEE-eCCC
Confidence 78999999999999999999887654 4444 4433
No 9
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=57.81 E-value=6.1 Score=39.87 Aligned_cols=33 Identities=12% Similarity=0.217 Sum_probs=26.8
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
-.+.||||++|||.+.-..+..|.....++|.|
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itli 38 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMI 38 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEE
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEE
Confidence 367899999999999999999997666777655
No 10
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=56.37 E-value=6.3 Score=40.37 Aligned_cols=26 Identities=8% Similarity=0.233 Sum_probs=23.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCe
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRV 85 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~l 85 (485)
||||++|||.|.-..+..|++.+.+.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~ 26 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKES 26 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCC
Confidence 89999999999999999999887543
No 11
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=49.46 E-value=9.9 Score=37.02 Aligned_cols=30 Identities=10% Similarity=0.094 Sum_probs=26.4
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+||+++|||-+...++..|++.+.+++++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence 479999999999999999999998876654
No 12
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=47.64 E-value=15 Score=31.90 Aligned_cols=30 Identities=20% Similarity=0.125 Sum_probs=21.1
Q ss_pred CCeEEEEeCCcchhHHHHHHHc---CCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~---~~~~lt~I 88 (485)
..++++++||+|+.-++.=++. .+.+++.+
T Consensus 18 ~~~~llIaGG~GiaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 18 FGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp CSEEEEEEETTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHhcCCcEEEE
Confidence 5789999999998877654443 34455544
No 13
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=46.96 E-value=11 Score=38.14 Aligned_cols=26 Identities=19% Similarity=0.314 Sum_probs=22.4
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCC
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTR 84 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~ 84 (485)
.+|||++|||.|.-..+..|++...+
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~ 27 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPD 27 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTT
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcC
Confidence 46899999999999999999987643
No 14
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=46.06 E-value=16 Score=31.56 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=25.7
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
...|+++|||-+...++..|.+.+.+++.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 346999999999999999999998876554
No 15
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=44.95 E-value=11 Score=35.57 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=26.8
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+..+||++|||.+.-..+..|++.+.+++.|
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vi 51 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILY 51 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 34578999999999999999999988886655
No 16
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=43.58 E-value=17 Score=37.99 Aligned_cols=41 Identities=15% Similarity=0.033 Sum_probs=31.3
Q ss_pred cCCCCCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCC
Q 011440 52 FSNPTHTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSD 93 (485)
Q Consensus 52 ~~~~~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~D 93 (485)
....+....+||++|||.+.-..+..|++.+.+++.| --.+
T Consensus 36 ~~~~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~li-E~~~ 76 (523)
T 1mo9_A 36 VDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIV-DRWP 76 (523)
T ss_dssp CCTTCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEE-ESSS
T ss_pred cCCCCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEE-eCCC
Confidence 3334455679999999999999999999988886644 3334
No 17
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=42.14 E-value=21 Score=33.37 Aligned_cols=39 Identities=13% Similarity=0.039 Sum_probs=31.0
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCc
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGG 96 (485)
...+||++|||.+.-..+..|++.+.+++.|+--..-||
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG 41 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGG 41 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCc
Confidence 346899999999999999999998888888565533343
No 18
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=41.22 E-value=23 Score=30.33 Aligned_cols=33 Identities=9% Similarity=0.074 Sum_probs=28.5
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEe
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVt 90 (485)
.+++|+++|+|.=...+++.|.+.+.++++|-.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISN 34 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 457899999999999999999998888887754
No 19
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=40.27 E-value=30 Score=29.28 Aligned_cols=36 Identities=11% Similarity=-0.021 Sum_probs=30.0
Q ss_pred CCCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEe
Q 011440 55 PTHTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (485)
Q Consensus 55 ~~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVt 90 (485)
+.....+|+++|.|.=...+++.|++.+.++++|-.
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIET 38 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 345678999999999999999999998888777654
No 20
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=40.16 E-value=19 Score=35.21 Aligned_cols=42 Identities=21% Similarity=0.090 Sum_probs=30.4
Q ss_pred CCCeEEEEeCCcchhHHHHHHHc-CC-CCeEEEEeCCCCCcchH
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKN-IT-TRVAHVLPVSDDGGSTA 99 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~-~~-~~lt~IVtv~DDGGSSG 99 (485)
...+|+|+|||.+...++..|.+ .+ .+++.|=--.--+|+|+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~ 63 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMA 63 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCccc
Confidence 45689999999999999999998 77 77665533322334555
No 21
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=39.92 E-value=19 Score=33.31 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=25.8
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+++|||.+.-..+..|++.+.+++.|
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li 31 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLV 31 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999988887665
No 22
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=39.86 E-value=19 Score=32.63 Aligned_cols=42 Identities=21% Similarity=0.338 Sum_probs=33.3
Q ss_pred HHHHHHh----cCCEEEEcCCCcc-ccccccccchhHHHHHhcCCCCE--EEEeCC
Q 011440 326 AVLDQLN----AVDCIIYAMGSLF-TSICPSLVLLGIGEIISSRSCPK--VLLLNG 374 (485)
Q Consensus 326 ~al~AI~----~ADlII~gPGSly-TSI~P~Llv~GI~~AI~~s~a~k--V~I~Nl 374 (485)
+.++.|. +.|.|||=||-+= ||| -++|||+....|. |=++|+
T Consensus 62 eLId~Ih~a~~~~dgiiINpgA~THtSv-------AlrDAl~~~~~P~VEVHiSNi 110 (153)
T 3lwz_A 62 ALIDSIHQARGNTDFILINPAAFTHTSV-------ALRDALLGVQIPFIEIHLSNV 110 (153)
T ss_dssp HHHHHHHHHTTTCSEEEEECGGGGGTCH-------HHHHHHHHHTCCEEEEESSCG
T ss_pred HHHHHHHHhhhcCceEEEccccceechH-------HHHHHHHhcCCCEEEEEcCCc
Confidence 4455554 4699999999985 998 6899999888887 667888
No 23
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=39.30 E-value=25 Score=32.41 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=31.3
Q ss_pred HhcCCEEEEcCCCcc-ccccccccchhHHHHHhcCCCCE--EEEeCC
Q 011440 331 LNAVDCIIYAMGSLF-TSICPSLVLLGIGEIISSRSCPK--VLLLNG 374 (485)
Q Consensus 331 I~~ADlII~gPGSly-TSI~P~Llv~GI~~AI~~s~a~k--V~I~Nl 374 (485)
..++|.|||=||-+= ||| -++|||+..+.|. |=++|+
T Consensus 92 ~~~~dgIIINPgAyTHtSv-------AlrDAL~~v~~P~VEVHiSNi 131 (172)
T 3n8k_A 92 ADAAEPVILNAGGLTHTSV-------ALRDACAELSAPLIEVHISNV 131 (172)
T ss_dssp HHHTCCEEEECGGGGGTCH-------HHHHHHTTCCSCEEEEESSCT
T ss_pred hhcCcEEEECcchhhhhhH-------HHHHHHHhCCCCEEEEEcCCc
Confidence 345799999999985 998 6999999988887 667888
No 24
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=39.23 E-value=18 Score=31.86 Aligned_cols=31 Identities=16% Similarity=0.060 Sum_probs=21.9
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC---CCCeEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI---TTRVAHV 88 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~---~~~lt~I 88 (485)
...++++++||+|+.-++.=++.+ +.+++.+
T Consensus 22 ~~~~~llIaGG~GItPl~sm~~~l~~~~~~v~l~ 55 (158)
T 3lrx_A 22 KFGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTL 55 (158)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCeEEEEEccCcHHHHHHHHHHHHhcCCcEEEE
Confidence 467899999999988776655443 4455554
No 25
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=39.01 E-value=23 Score=33.68 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=30.2
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEe
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVt 90 (485)
-.+++|+++|||.=....++.|.+.+.++|+|-+
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 5689999999999999999999999999887754
No 26
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=38.63 E-value=40 Score=27.77 Aligned_cols=47 Identities=17% Similarity=0.288 Sum_probs=32.0
Q ss_pred CCHHHHHHHh--cCCEEEEcCCCccccccccccchhHHHH-HhcCCCCEEEE
Q 011440 323 ANSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIGEI-ISSRSCPKVLL 371 (485)
Q Consensus 323 ~~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~~A-I~~s~a~kV~I 371 (485)
+..+.++..+ ++|+||+|--. .+-+..+++..+.+. +++++||++.|
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~--~~~~~~~~~Gs~~~~vl~~~~~pVlvV 147 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQG--TNGDKSLLLGSVAQRVAGSAHCPVLVV 147 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSC--TTCCSCCCCCHHHHHHHHHCSSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeCCC--CccccceeeccHHHHHHhhCCCCEEEC
Confidence 3456777777 89999999643 233455666677654 56788998654
No 27
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=38.37 E-value=29 Score=31.86 Aligned_cols=57 Identities=25% Similarity=0.331 Sum_probs=42.6
Q ss_pred hcCCEEEEcCCCcc-ccccccccchhHHHHHhcCCCCE--EEEeCC--CCC------------CcCCCCCHHHHHHHHHH
Q 011440 332 NAVDCIIYAMGSLF-TSICPSLVLLGIGEIISSRSCPK--VLLLNG--LED------------RETSGFSASCFVTAITD 394 (485)
Q Consensus 332 ~~ADlII~gPGSly-TSI~P~Llv~GI~~AI~~s~a~k--V~I~Nl--t~d------------gET~g~sa~d~v~al~~ 394 (485)
.+.|.|||=||-+= ||| -++|||+....|. |=++|+ .++ |.-.|+-+..+.-||..
T Consensus 82 ~~~dgIIINpgAyTHtSv-------AlrDAL~~v~~P~VEVHiSNihaRE~FRh~S~~s~~a~GvI~G~G~~gY~lAl~~ 154 (167)
T 3kip_A 82 QGVGFVVINAGAYTHTSV-------GIRDALLGTAIPFIEVHITNVHQREPFRHQSYLSDKAVAVICGLGVYGYTAAIEY 154 (167)
T ss_dssp TTCCEEEEECGGGGGTCH-------HHHHHHHHTTCCEEEEESSCGGGSCGGGGCCSSGGGSSEEEESSTTHHHHHHHHH
T ss_pred cCccEEEEccccceeccH-------HHHHHHHhcCCCEEEEEcCCccccccchhcccccccceEEEEeCChhhHHHHHHH
Confidence 45799999999985 998 7999999988887 667888 332 22237777777777654
Q ss_pred H
Q 011440 395 A 395 (485)
Q Consensus 395 ~ 395 (485)
.
T Consensus 155 l 155 (167)
T 3kip_A 155 A 155 (167)
T ss_dssp H
T ss_pred H
Confidence 3
No 28
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=38.28 E-value=26 Score=36.29 Aligned_cols=32 Identities=25% Similarity=0.123 Sum_probs=26.8
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcCCCCeEE
Q 011440 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAH 87 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~ 87 (485)
+..+.+|+++|||.+.-..+..|++.+.+++.
T Consensus 119 ~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v 150 (456)
T 2vdc_G 119 RELGLSVGVIGAGPAGLAAAEELRAKGYEVHV 150 (456)
T ss_dssp SSCCCCEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 35678999999999999999999988877543
No 29
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=37.86 E-value=19 Score=35.68 Aligned_cols=30 Identities=13% Similarity=0.041 Sum_probs=26.2
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+|+++|||-+...++..|++.+.+++.|
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~ 52 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVY 52 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 568999999999999999999998776554
No 30
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=37.27 E-value=24 Score=34.29 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=29.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCcchH
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTA 99 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGGSSG 99 (485)
..+|||+|||.+...++..|.+.+.+++.|=.-.--+|+|+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~ 57 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTS 57 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccch
Confidence 45899999999999999999998887665543222233444
No 31
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=37.09 E-value=19 Score=35.33 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=31.6
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCC
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVS 92 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~ 92 (485)
-.+++|+++|||.=..+.++.|.+.+.++|+|-+-.
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 368999999999999999999999999999886544
No 32
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=36.78 E-value=23 Score=35.37 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=25.2
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCC--CeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITT--RVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~--~lt~I 88 (485)
+++||++|||.+.-..+..|++.+. ++|.|
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~li 32 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALI 32 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEE
Confidence 3689999999999999999999876 55544
No 33
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=36.06 E-value=24 Score=32.99 Aligned_cols=30 Identities=10% Similarity=0.074 Sum_probs=25.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+|+++|||.+.-..+..|++.+.+++.|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li 44 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVI 44 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEE
Confidence 468999999999999999999988886544
No 34
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=35.86 E-value=19 Score=35.77 Aligned_cols=28 Identities=11% Similarity=0.200 Sum_probs=21.9
Q ss_pred CCCCCCeEEEEeCCcchhHHHHHHHcCC
Q 011440 55 PTHTQPSLLVFSGGTAFNGVVEELKNIT 82 (485)
Q Consensus 55 ~~~~~~~IVv~gGGTG~~~ll~gLk~~~ 82 (485)
.-+.+.+||++|||.|.-..+..|++.+
T Consensus 4 ~~~~~~~vvIIGgG~AGl~aA~~l~~~g 31 (367)
T 1xhc_A 4 HHHHGSKVVIVGNGPGGFELAKQLSQTY 31 (367)
T ss_dssp -----CEEEEECCSHHHHHHHHHHTTTS
T ss_pred cccCCCcEEEECCcHHHHHHHHHHhhcC
Confidence 3467889999999999999999999887
No 35
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=35.67 E-value=24 Score=28.85 Aligned_cols=31 Identities=6% Similarity=0.050 Sum_probs=24.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+++|+++|+|.=...+++.|.+.+.+++++
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~ 33 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIVLI 33 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 3579999999998889999999887776655
No 36
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=35.54 E-value=22 Score=34.91 Aligned_cols=31 Identities=23% Similarity=-0.027 Sum_probs=25.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
...+|+++|||-+...++..|++.+.+++.|
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~vi 40 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLH 40 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 3578999999999999999999988765544
No 37
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=35.07 E-value=18 Score=31.51 Aligned_cols=24 Identities=13% Similarity=0.281 Sum_probs=19.0
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++|+++||||..-++.-|+.+
T Consensus 16 ~~~~~vlIagG~GItP~~s~l~~l 39 (186)
T 3a1f_A 16 SYEVVMLVGAGIGVTPFASILKSV 39 (186)
T ss_dssp TSSEEEEEEEGGGHHHHHHHHHHH
T ss_pred hCCeEEEEecCccHHHHHHHHHHH
Confidence 456899999999999887666543
No 38
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=34.05 E-value=22 Score=37.58 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=25.4
Q ss_pred CCCCCCeEEEEeCCcchhHHHHHHHcC--CCCeEE
Q 011440 55 PTHTQPSLLVFSGGTAFNGVVEELKNI--TTRVAH 87 (485)
Q Consensus 55 ~~~~~~~IVv~gGGTG~~~ll~gLk~~--~~~lt~ 87 (485)
++.+.++||++|||.+.-..+..|++. +.+++.
T Consensus 32 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~v 66 (588)
T 3ics_A 32 DRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIM 66 (588)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEE
T ss_pred CcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEE
Confidence 445678999999999999999999987 444443
No 39
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=33.34 E-value=28 Score=34.38 Aligned_cols=29 Identities=21% Similarity=0.160 Sum_probs=25.7
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+||++|||.+...++..|++.+.+++.|
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~ 34 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIV 34 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999988876655
No 40
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=33.06 E-value=30 Score=32.78 Aligned_cols=30 Identities=13% Similarity=0.069 Sum_probs=26.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
.+|+++|||-....++..|++.+.+++.|=
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE 32 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEE
Confidence 579999999999999999999988766553
No 41
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=32.96 E-value=21 Score=36.23 Aligned_cols=34 Identities=18% Similarity=0.062 Sum_probs=27.6
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEe
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVt 90 (485)
.+..+|+|+|||-+...++..|.+.+.+++.|=.
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 3456899999999999999999999888777653
No 42
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=32.84 E-value=31 Score=29.82 Aligned_cols=29 Identities=17% Similarity=0.123 Sum_probs=25.8
Q ss_pred eEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 61 SLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 61 ~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
+|+++|||-..-.++..|++.+.+++.|-
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie 31 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLD 31 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEe
Confidence 79999999999999999999988877664
No 43
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=32.71 E-value=29 Score=36.48 Aligned_cols=30 Identities=23% Similarity=0.191 Sum_probs=25.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHc---CCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~---~~~~lt~I 88 (485)
..+||++|||.+...++..|++ .+.+++.|
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~li 57 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLL 57 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEE
Confidence 4589999999999999999999 66666655
No 44
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=32.59 E-value=29 Score=34.83 Aligned_cols=29 Identities=7% Similarity=0.130 Sum_probs=24.9
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCC--eEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTR--VAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~--lt~I 88 (485)
++||++|||.+.-..+..|++.+.+ ++.|
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li 33 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLI 33 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEE
Confidence 5899999999999999999998876 4444
No 45
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=32.58 E-value=29 Score=31.35 Aligned_cols=34 Identities=26% Similarity=0.274 Sum_probs=30.2
Q ss_pred CCEEEEcCCCc-cccccccccchhHHHHHhcCCCCE--EEEeCC
Q 011440 334 VDCIIYAMGSL-FTSICPSLVLLGIGEIISSRSCPK--VLLLNG 374 (485)
Q Consensus 334 ADlII~gPGSl-yTSI~P~Llv~GI~~AI~~s~a~k--V~I~Nl 374 (485)
.|.||+=||-+ .||| -++|||+....|. |=++|+
T Consensus 67 ~dgiIINpgA~THtSv-------AlrDAl~~v~~P~VEVHiSNi 103 (149)
T 2uyg_A 67 FLAIVLNPGALTHYSY-------ALLDAIRAQPLPVVEVHLTNL 103 (149)
T ss_dssp CSEEEEECGGGGGTCH-------HHHHHHHTSCSCEEEEESSCG
T ss_pred eeEEEEccchhccccH-------HHHHHHHhCCCCEEEEEecCc
Confidence 68999999999 9998 5899999998887 667898
No 46
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=32.56 E-value=29 Score=38.08 Aligned_cols=57 Identities=16% Similarity=0.213 Sum_probs=37.1
Q ss_pred CCCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHH
Q 011440 55 PTHTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIR 114 (485)
Q Consensus 55 ~~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGGSSG~LR~~~g~~~~GDiR 114 (485)
++..+.+||++|||.+.-..+..|++.+.++|.| .-.+. -.|.++.....|...+++
T Consensus 385 ~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtli-e~~~~--~GG~~~~~~~~pg~~~~~ 441 (729)
T 1o94_A 385 QTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLT-DTAEK--IGGHLNQVAALPGLGEWS 441 (729)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEE-CSSSS--TTTTHHHHTTSTTCGGGH
T ss_pred cccCCceEEEECCCHHHHHHHHHHHHCCCeEEEE-eCCCC--cCCeeeecccCCChHHHH
Confidence 3455679999999999999999999888774433 33332 234455544444444554
No 47
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=32.28 E-value=25 Score=32.35 Aligned_cols=24 Identities=17% Similarity=0.336 Sum_probs=18.9
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++|+++||||+.-++.-++++
T Consensus 115 ~~~~~vliagG~GiaP~~~~l~~l 138 (243)
T 2eix_A 115 MVKEMGMIAGGTGITPMLQVARAI 138 (243)
T ss_dssp SSSEEEEEEEGGGHHHHHHHHHHH
T ss_pred CCcEEEEEecCccHHHHHHHHHHH
Confidence 357899999999999877665543
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=32.28 E-value=25 Score=35.21 Aligned_cols=31 Identities=10% Similarity=0.139 Sum_probs=26.0
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCC--eEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTR--VAHV 88 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~--lt~I 88 (485)
+..+||++|||.+.-..+..|++.+.+ ++.|
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~li 40 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVI 40 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEE
Confidence 457899999999999999999998766 5544
No 49
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=32.24 E-value=35 Score=32.26 Aligned_cols=52 Identities=21% Similarity=0.280 Sum_probs=33.9
Q ss_pred CCCCCCeEEEE--eCCcchhHHHHHHHc-CCCCeEEEEeCCCCCcchHHHHHHcCCC
Q 011440 55 PTHTQPSLLVF--SGGTAFNGVVEELKN-ITTRVAHVLPVSDDGGSTAEIVRVLGGP 108 (485)
Q Consensus 55 ~~~~~~~IVv~--gGGTG~~~ll~gLk~-~~~~lt~IVtv~DDGGSSG~LR~~~g~~ 108 (485)
+|...+||++| |.||-+..++..++. +..++.+||+--|-.+ -+.=+.+|+|
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a~~--~~~A~~~gIp 62 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRA--AEIAAEASVP 62 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCCHH--HHHHHHTTCC
T ss_pred CCCCCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCchHH--HHHHHHcCCC
Confidence 45667899999 556666678877754 3457888887666321 2334567775
No 50
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=32.20 E-value=30 Score=37.32 Aligned_cols=32 Identities=16% Similarity=0.058 Sum_probs=26.3
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcCCCCeEE
Q 011440 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAH 87 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~ 87 (485)
+....+||++|||.+.-..+..|++.+.+++.
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~l 401 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTL 401 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 34567999999999999999999988776443
No 51
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=32.17 E-value=36 Score=33.06 Aligned_cols=40 Identities=23% Similarity=0.224 Sum_probs=29.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCC-CcchH
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDD-GGSTA 99 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DD-GGSSG 99 (485)
..+|||+|||.....++..|.+.+.+++.|=. .+- +|+|+
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~-~~~~~gas~ 45 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEK-RFIGSGSTF 45 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECS-SSTTCSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeC-CCCCCCccc
Confidence 45899999999999999999998877554433 232 34555
No 52
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=32.10 E-value=40 Score=31.65 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=23.9
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCC--CeEEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITT--RVAHVL 89 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~--~lt~IV 89 (485)
..++++++||||+.-++.-|+.+.. .+++++
T Consensus 112 ~~~~lliagGtGitPi~s~l~~l~~~~~~~~~~ 144 (252)
T 2gpj_A 112 ADWFLLAGDMTALPAISVNLAKLPNNAVGYAVI 144 (252)
T ss_dssp SSEEEEEEEGGGHHHHHHHHHHSCTTCEEEEEE
T ss_pred CceEEEEcchhhHHHHHHHHHhCCCCCcEEEEE
Confidence 3589999999999999888887743 344444
No 53
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=32.04 E-value=23 Score=35.20 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=24.3
Q ss_pred CeEEEEeCCcchhHHHHHHHc---CCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~---~~~~lt~I 88 (485)
++||++|||.+.-..+..|++ .+.++|.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vi 33 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVI 33 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEE
Confidence 589999999999999999998 56666654
No 54
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=31.62 E-value=31 Score=32.57 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=25.3
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+++|||.+.-.++..|++.+.+++.|
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vi 32 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVIL 32 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 47999999999999999999998886554
No 55
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=31.61 E-value=34 Score=32.20 Aligned_cols=63 Identities=17% Similarity=0.173 Sum_probs=38.2
Q ss_pred HHhcCCEEEEcCCCccccccccccchhHHHHHh----cCCCCEEEEeCCCCCCcCCCCCHHHHHHHHHHHhcccC
Q 011440 330 QLNAVDCIIYAMGSLFTSICPSLVLLGIGEIIS----SRSCPKVLLLNGLEDRETSGFSASCFVTAITDALNRAY 400 (485)
Q Consensus 330 AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~----~s~a~kV~I~Nlt~dgET~g~sa~d~v~al~~~lg~~~ 400 (485)
.+..--...+|-|..+.|. +-++++.+|+. +....-+| |++.+. ..|..|.++.+.+.+|+..
T Consensus 174 ~~~~~~~~~~g~g~~~~~~---ihv~Dva~a~~~~~~~~~~~g~y--n~~~~~---~~t~~e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 174 PFRLGLGGPIGSGHQFFPW---IHIGDLAGILTHALEANHVHGVL--NGVAPS---SATNAEFAQTFGAALGRRA 240 (298)
T ss_dssp HHHTTCCCCBTTSCSBCCE---EEHHHHHHHHHHHHHCTTCCEEE--EESCSC---CCBHHHHHHHHHHHHTCCC
T ss_pred HHhcCCcceecccCceeec---CcHHHHHHHHHHHHhCCCCCCeE--EEECCC---ccCHHHHHHHHHHHhCcCC
Confidence 3333344556666666553 34667776654 33344444 664332 3589999999999998753
No 56
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=31.45 E-value=27 Score=31.89 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=23.7
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC---C--CCeEEEEeC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI---T--TRVAHVLPV 91 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~---~--~~lt~IVtv 91 (485)
...++|+++||||+.-++.-++++ . .+++.+..+
T Consensus 101 ~~~~~vliagG~GitP~~~~l~~l~~~~~~~~v~l~~~~ 139 (232)
T 1qfj_A 101 EERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGG 139 (232)
T ss_dssp SSSCEEEEEETTCHHHHHHHHHHHHHHCTTCCEEEEEEE
T ss_pred CCCcEEEEEecccHhHHHHHHHHHHhcCCCCcEEEEEee
Confidence 357899999999999877665544 2 455555443
No 57
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=31.13 E-value=45 Score=33.52 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=33.6
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCC
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDD 94 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DD 94 (485)
.+.++|+++|||..+.-++++.++++.++++|-+..|+
T Consensus 3 ~~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~ 40 (425)
T 3vot_A 3 KRNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAED 40 (425)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSC
T ss_pred CCCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCcc
Confidence 56789999999999999999999999998888776665
No 58
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=31.11 E-value=28 Score=35.08 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=24.1
Q ss_pred CCeEEEEeCCcchhHHHHHHHc--CCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKN--ITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~--~~~~lt~I 88 (485)
..+||++|||.+.-..+..|++ .+.++|.|
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtli 33 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLI 33 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEE
Confidence 3689999999999999999998 44555554
No 59
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=30.92 E-value=30 Score=34.97 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=24.0
Q ss_pred CeEEEEeCCcchhHHHHHHHc---CCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~---~~~~lt~I 88 (485)
++||++|||.+.-..+..|++ .+.++|.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtli 36 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLI 36 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEE
Confidence 589999999999999999988 55666554
No 60
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=30.88 E-value=59 Score=27.77 Aligned_cols=47 Identities=13% Similarity=0.166 Sum_probs=32.4
Q ss_pred CCHHHHHHHh--cCCEEEEcCCCccccccccccchhHHHH-HhcCCCCEEEE
Q 011440 323 ANSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIGEI-ISSRSCPKVLL 371 (485)
Q Consensus 323 ~~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~~A-I~~s~a~kV~I 371 (485)
+....++..+ ++|+||+|--.. +-+-.+++..+.+. ++.++||++.|
T Consensus 105 ~~~~I~~~a~~~~~DLIV~G~~g~--~~~~~~~lGSv~~~vl~~a~~PVLvV 154 (155)
T 3dlo_A 105 PPDDIVDFADEVDAIAIVIGIRKR--SPTGKLIFGSVARDVILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCEE--CTTSCEECCHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC--CCCCCEEeccHHHHHHHhCCCCEEEe
Confidence 3466777777 899999986542 44455666777755 46788998665
No 61
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=30.84 E-value=64 Score=26.38 Aligned_cols=46 Identities=13% Similarity=0.211 Sum_probs=32.4
Q ss_pred CCHHHHHHHh--cCCEEEEcCCCccccccccccchhHHHHH-hcCCCCEEEE
Q 011440 323 ANSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIGEII-SSRSCPKVLL 371 (485)
Q Consensus 323 ~~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~~AI-~~s~a~kV~I 371 (485)
+..+.++..+ ++|+||+|-.. + -+-.+++..+.+.+ +.++||++.|
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~--~-~~~~~~~Gs~~~~v~~~~~~pVlvv 142 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHR--P-DITTYLLGSNAAAVVRHAECSVLVV 142 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSC--T-TCCSCSSCHHHHHHHHHCSSEEEEE
T ss_pred hHHHHHHHHHHhCCCEEEEeCCC--C-CCeeeeeccHHHHHHHhCCCCEEEe
Confidence 3466677777 79999999862 3 35566777777554 6778887665
No 62
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=30.63 E-value=79 Score=26.53 Aligned_cols=48 Identities=15% Similarity=0.216 Sum_probs=33.4
Q ss_pred CHHHHHHHh--cCCEEEEcCCCccccccccccchhHHHHH-hcCCCCEEEEeC
Q 011440 324 NSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIGEII-SSRSCPKVLLLN 373 (485)
Q Consensus 324 ~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~~AI-~~s~a~kV~I~N 373 (485)
....++..+ ++|+||+|--.. +-+-.+++..+.+.| +.++||++.|.+
T Consensus 109 ~~~I~~~a~~~~~dlIV~G~~g~--~~~~~~~~GSv~~~vl~~~~~pVlvv~~ 159 (162)
T 1mjh_A 109 HEEIVKIAEDEGVDIIIMGSHGK--TNLKEILLGSVTENVIKKSNKPVLVVKR 159 (162)
T ss_dssp HHHHHHHHHHTTCSEEEEESCCS--SCCTTCSSCHHHHHHHHHCCSCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCC--CCccceEecchHHHHHHhCCCCEEEEeC
Confidence 356667777 899999995432 445566677777555 678899888753
No 63
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=30.58 E-value=30 Score=33.09 Aligned_cols=32 Identities=13% Similarity=0.015 Sum_probs=26.7
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
....+|+++|||.+.-..+..|++.+.+++.|
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li 43 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVF 43 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 34568999999999999999999888776654
No 64
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=30.56 E-value=37 Score=36.63 Aligned_cols=36 Identities=14% Similarity=0.051 Sum_probs=28.9
Q ss_pred CCCCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 54 NPTHTQPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 54 ~~~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
+++....+|||+|||.+....+..|.+.+.+++.|=
T Consensus 267 ~~~~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlE 302 (676)
T 3ps9_A 267 RTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYC 302 (676)
T ss_dssp CCCCSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CccCCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 344455799999999999999999999887766654
No 65
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=30.51 E-value=33 Score=32.18 Aligned_cols=29 Identities=10% Similarity=-0.099 Sum_probs=25.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+||++|||.+.-..+..|++.+.+++.|
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li 36 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKII 36 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 58999999999999999999887776554
No 66
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=30.48 E-value=33 Score=33.23 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=25.4
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+|||+|||.+...++..|.+.+.+++.|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vi 32 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLV 32 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 457999999999999999999988775544
No 67
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=30.17 E-value=22 Score=33.46 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=25.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+|+++|||.+.-..+..|++.+.+++.|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li 34 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLI 34 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 458999999999999999999988776544
No 68
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=30.08 E-value=58 Score=32.52 Aligned_cols=36 Identities=22% Similarity=0.282 Sum_probs=27.8
Q ss_pred CCCeEEEEeCCcchh-HHHHHHHcCCCCeEEEEeCCCC
Q 011440 58 TQPSLLVFSGGTAFN-GVVEELKNITTRVAHVLPVSDD 94 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~-~ll~gLk~~~~~lt~IVtv~DD 94 (485)
+++||++|| ++-++ .+++.|.+...++.+|||--|.
T Consensus 21 ~~mrIvf~G-~~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 57 (329)
T 2bw0_A 21 QSMKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPDK 57 (329)
T ss_dssp CCCEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEEeCCCc
Confidence 348999994 45555 4788888777899999998775
No 69
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=30.06 E-value=48 Score=31.25 Aligned_cols=51 Identities=12% Similarity=0.275 Sum_probs=34.5
Q ss_pred CCCeEEEE--eCCcchhHHHHHHHc-CCCCeEEEEeCCCCCcchHHHHHHcCCCC
Q 011440 58 TQPSLLVF--SGGTAFNGVVEELKN-ITTRVAHVLPVSDDGGSTAEIVRVLGGPA 109 (485)
Q Consensus 58 ~~~~IVv~--gGGTG~~~ll~gLk~-~~~~lt~IVtv~DDGGSSG~LR~~~g~~~ 109 (485)
..+||++| |.||-+..++..++. +..++.+||+--+|... -+.=+.+|+|.
T Consensus 4 ~~~riavl~SG~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~~-~~~A~~~gIp~ 57 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAIIGAIQKGLAIEIRAVISNRADAYG-LKRAQQADIPT 57 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHTTCSEEEEEEEESCTTCHH-HHHHHHTTCCE
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHcCCCCEEEEEEeCCcchHH-HHHHHHcCCCE
Confidence 35689998 667777789998876 45688888886555421 12345667764
No 70
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=29.79 E-value=34 Score=33.22 Aligned_cols=29 Identities=14% Similarity=0.149 Sum_probs=25.2
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..|+++|||.+...++..|.+.+.+++.|
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~ 33 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 47999999999999999999988876655
No 71
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=29.71 E-value=39 Score=30.30 Aligned_cols=38 Identities=32% Similarity=0.270 Sum_probs=31.7
Q ss_pred HHhcCCEEEEcCCCc-cccccccccchhHHHHHhcCCCCE--EEEeCC
Q 011440 330 QLNAVDCIIYAMGSL-FTSICPSLVLLGIGEIISSRSCPK--VLLLNG 374 (485)
Q Consensus 330 AI~~ADlII~gPGSl-yTSI~P~Llv~GI~~AI~~s~a~k--V~I~Nl 374 (485)
|..+.|.||+=||-+ .||| -++|||+....|. |=++|+
T Consensus 63 a~~~~dgiiiNpgA~THtSv-------AlrDAl~~v~~P~VEVHiSNi 103 (143)
T 1gqo_A 63 AEEQYSGIVLNPGALSHYSY-------AIRDAVSSISLPVVEVHLSNL 103 (143)
T ss_dssp HTTTCSEEEEECGGGGGTCH-------HHHHHHHTSCSCEEEEESSCG
T ss_pred hhhcCcEEEEccchhccccH-------HHHHHHHhCCCCEEEEEecCc
Confidence 344568999999999 5998 5899999998887 667898
No 72
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=29.62 E-value=25 Score=36.13 Aligned_cols=29 Identities=31% Similarity=0.225 Sum_probs=24.8
Q ss_pred CeEEEEeCCcchhHHHHHHHc---CCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~---~~~~lt~I 88 (485)
.+||++|||++...++..|.+ .+.+++.|
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lv 34 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLV 34 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEE
Confidence 589999999999999999998 66666554
No 73
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=29.59 E-value=73 Score=27.31 Aligned_cols=49 Identities=6% Similarity=0.228 Sum_probs=28.8
Q ss_pred CHHHHHHHh--cCCEEEEcCCCccccccccccchhHHHH-HhcCCCCEEEEeCC
Q 011440 324 NSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIGEI-ISSRSCPKVLLLNG 374 (485)
Q Consensus 324 ~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~~A-I~~s~a~kV~I~Nl 374 (485)
..+.++..+ ++|+||+|--. .+-+..+++..+.+. ++.++||++.|..-
T Consensus 113 ~~~I~~~a~~~~~DLIVmG~~g--~~~~~~~~~Gsva~~vl~~a~~pVlvv~~~ 164 (175)
T 2gm3_A 113 KDVICQEVKRVRPDFLVVGSRG--LGRFQKVFVGTVSAFCVKHAECPVMTIKRN 164 (175)
T ss_dssp HHHHHHHHHHHCCSEEEEEECC--CC--------CHHHHHHHHCSSCEEEEECC
T ss_pred HHHHHHHHHHhCCCEEEEeCCC--CChhhhhhcCchHHHHHhCCCCCEEEEcCC
Confidence 456666666 69999998533 234455566677754 56788999888764
No 74
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=29.51 E-value=36 Score=33.66 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=26.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+|+++|||-+...++..|++.+.+++.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~ 34 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVY 34 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 468999999999999999999988776555
No 75
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=29.18 E-value=35 Score=32.77 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=24.2
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCC-CeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITT-RVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~-~lt~I 88 (485)
.+|+++|||.+.-.++..|++.+. +++.|
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~li 34 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIIL 34 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEE
Confidence 579999999999999999998876 55443
No 76
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=29.05 E-value=39 Score=30.42 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=32.4
Q ss_pred HHHhcCCEEEEcCCCc-cccccccccchhHHHHHhcCCCCE--EEEeCC
Q 011440 329 DQLNAVDCIIYAMGSL-FTSICPSLVLLGIGEIISSRSCPK--VLLLNG 374 (485)
Q Consensus 329 ~AI~~ADlII~gPGSl-yTSI~P~Llv~GI~~AI~~s~a~k--V~I~Nl 374 (485)
+|..+.|.||+=||-+ .||| .++|||+....|. |=++|+
T Consensus 64 ~a~~~~dgiiINpgA~THtSv-------AlrDAl~~v~~P~VEVHiSNi 105 (146)
T 1h05_A 64 QAADAAEPVILNAGGLTHTSV-------ALRDACAELSAPLIEVHISNV 105 (146)
T ss_dssp HHHHHTCCEEEECGGGGGTCH-------HHHHHHHTCCSCEEEEESSCG
T ss_pred HhhhcCcEEEECchhhccccH-------HHHHHHHhCCCCEEEEEecCc
Confidence 3445679999999999 5998 5899999998887 667898
No 77
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=28.71 E-value=27 Score=35.49 Aligned_cols=28 Identities=4% Similarity=0.008 Sum_probs=23.5
Q ss_pred CeEEEEeCCcchhHHHHHHHcC--CCCeEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAH 87 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~--~~~lt~ 87 (485)
++||++|||.+.-..+..|++. +.+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~v 32 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISL 32 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEE
Confidence 6899999999999999999987 455543
No 78
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=28.60 E-value=35 Score=34.76 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=25.5
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
....+|+|+|||.+.-..+..|.+.+.+++.|
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~ll 56 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVI 56 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 34568999999999999999999988876655
No 79
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=28.57 E-value=32 Score=33.72 Aligned_cols=29 Identities=7% Similarity=-0.014 Sum_probs=25.5
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+++|||-+...++..|++.+.+++.|
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~ 31 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVIL 31 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 57999999999999999999988876654
No 80
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=28.50 E-value=33 Score=32.53 Aligned_cols=31 Identities=10% Similarity=-0.010 Sum_probs=25.9
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
..+|+++|||.+.-..+..|++.+.+++.|=
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie 38 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILE 38 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEe
Confidence 4589999999999999999998888765543
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=28.42 E-value=33 Score=37.20 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=26.7
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
+....+||++|||.+.-..+..|++.+.+++.|
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~li 420 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLA 420 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEE
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 345678999999999999999999887775443
No 82
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=27.91 E-value=39 Score=32.18 Aligned_cols=29 Identities=14% Similarity=0.062 Sum_probs=25.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+|+|||.+....+..|.+.+.+++.|
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vl 33 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVA 33 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 57999999999999999999988876655
No 83
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=27.84 E-value=37 Score=33.52 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=26.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
..+|+++|||-+...++..|++.+.+++.+=
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E 56 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYE 56 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 4689999999999999999999887766553
No 84
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=27.59 E-value=57 Score=29.48 Aligned_cols=37 Identities=11% Similarity=0.161 Sum_probs=29.7
Q ss_pred HhcCCEEEEcCCCcc-ccccccccchhHHHH---HhcCCCCE--EEEeCC
Q 011440 331 LNAVDCIIYAMGSLF-TSICPSLVLLGIGEI---ISSRSCPK--VLLLNG 374 (485)
Q Consensus 331 I~~ADlII~gPGSly-TSI~P~Llv~GI~~A---I~~s~a~k--V~I~Nl 374 (485)
..+.|.||+=||-+- ||| -++|| |+..+.|. |=++|+
T Consensus 68 ~~~~dgiiINpgA~THtSv-------AlrDAl~~l~~~~~P~VEVHiSNi 110 (151)
T 3u80_A 68 ADEKTPVVMNPAAFTHYSY-------ALADAAHMVIDENLPLMEVHISNP 110 (151)
T ss_dssp HHHTCCEEEECTTCCSCCH-------HHHHHHHHHHHTTCCEEEEESSCC
T ss_pred hhcCcEEEECcchhhhhhH-------HHHHHHHHHhhcCCCEEEEEcCCc
Confidence 345699999999997 998 68999 66567776 677888
No 85
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=27.52 E-value=95 Score=25.29 Aligned_cols=47 Identities=23% Similarity=0.373 Sum_probs=31.9
Q ss_pred CCHHHHHHHh--cCCEEEEcCCCccccccccccchhHHHH-HhcCCCCEEEE
Q 011440 323 ANSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIGEI-ISSRSCPKVLL 371 (485)
Q Consensus 323 ~~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~~A-I~~s~a~kV~I 371 (485)
+..+.++..+ ++|+||+|-... +-+..+++..+.+. ++.++||++.|
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~--~~~~~~~~Gs~~~~vl~~~~~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGL--GALGSLFLGSQSQRVVAEAPCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCT--TCCSCSSSCHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC--chhhhhhhccHHHHHHhcCCCCEEEe
Confidence 4466777777 899999985432 33445566677755 46788988765
No 86
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=27.49 E-value=36 Score=31.53 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=24.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcC---C--CCeEEEEeCC
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNI---T--TRVAHVLPVS 92 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~---~--~~lt~IVtv~ 92 (485)
..++|+++||||+.-++.=++++ . .+++.+..+-
T Consensus 117 ~~~~vliagGtGiaP~~~~l~~l~~~~~~~~v~l~~~~r 155 (250)
T 1tvc_A 117 MAPRYFVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGVN 155 (250)
T ss_dssp SSCEEEEEESSTTHHHHHHHHHHHHHTCCSCEEEEEECS
T ss_pred CceEEEEEeccCHHHHHHHHHHHHhcCCCceEEEEEEeC
Confidence 46899999999999877665543 2 4566655443
No 87
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=27.48 E-value=34 Score=34.01 Aligned_cols=29 Identities=10% Similarity=-0.104 Sum_probs=24.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
++|+|+|||.+.-..+..|.+.+.+++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vl 29 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVL 29 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 58999999999999999999887665433
No 88
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=27.15 E-value=33 Score=35.35 Aligned_cols=31 Identities=6% Similarity=0.069 Sum_probs=24.9
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCC---CCeEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNIT---TRVAHV 88 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~---~~lt~I 88 (485)
+..+||++|||.|.-..+..|++.+ .+++.|
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~li 67 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVF 67 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEE
Confidence 4579999999999999999999875 554433
No 89
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=27.03 E-value=35 Score=35.59 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=26.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHc---CCCCeEEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKN---ITTRVAHVL 89 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~---~~~~lt~IV 89 (485)
..+|||+|||.+...++..|.+ .+.+++.|=
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE 38 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIE 38 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 3589999999999999999998 777766553
No 90
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=26.85 E-value=31 Score=33.27 Aligned_cols=23 Identities=9% Similarity=-0.018 Sum_probs=19.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcCC
Q 011440 60 PSLLVFSGGTAFNGVVEELKNIT 82 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~ 82 (485)
++|+|+|||.....++..|.+.+
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G 23 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERY 23 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHhc
Confidence 47999999988888888888775
No 91
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=26.77 E-value=42 Score=31.81 Aligned_cols=30 Identities=10% Similarity=-0.085 Sum_probs=25.1
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+|+++|||.+.-..+..|++.+.+++.|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li 34 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFV 34 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 358999999999999999999887776544
No 92
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=26.39 E-value=36 Score=33.56 Aligned_cols=29 Identities=14% Similarity=0.012 Sum_probs=23.9
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
++|+|+|||.+.-..+..|.+.+.+++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vl 29 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVF 29 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 47999999999888888998887665544
No 93
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=26.38 E-value=68 Score=26.50 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=29.0
Q ss_pred CCHHHHHHHh--cCCEEEEcCCCccccccccccchhHHHH-HhcCCCCEEEEeC
Q 011440 323 ANSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIGEI-ISSRSCPKVLLLN 373 (485)
Q Consensus 323 ~~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~~A-I~~s~a~kV~I~N 373 (485)
+..+.++..+ ++|+||+|--.. +-+. +++..+.+. ++.++||++.|.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~--~~~~-~~~Gs~~~~vl~~~~~pVlvv~~ 147 (150)
T 3tnj_A 97 PREEIIRIAEQENVDLIVVGSHGR--HGLA-LLLGSTANSVLHYAKCDVLAVRL 147 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC-----------CCCHHHHHHHHCSSEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCC--CCcC-eEecchHHHHHHhCCCCEEEEeC
Confidence 3466777777 899999995431 2233 566667655 5678888877653
No 94
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=26.34 E-value=35 Score=31.41 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=20.3
Q ss_pred CCeEEEEeCCcchhHHHHHHHcC
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
..++|+++||||+.-++.-++++
T Consensus 106 ~~~~vliagG~GitP~~~~l~~l 128 (248)
T 1fdr_A 106 CETLWMLATGTAIGPYLSILRLG 128 (248)
T ss_dssp CSEEEEEEEGGGGHHHHHHHHHC
T ss_pred CceEEEEEecccHHHHHHHHHHH
Confidence 57899999999999998888766
No 95
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=26.29 E-value=39 Score=33.91 Aligned_cols=27 Identities=22% Similarity=0.324 Sum_probs=23.7
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTR 84 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~ 84 (485)
+..+||++|||.+.-..+..|++.+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~ 32 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQ 32 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCC
Confidence 457899999999999999999988764
No 96
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=26.26 E-value=47 Score=28.41 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=26.1
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+++|+++|+|.=...+++.|+..+.+++++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vi 48 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVV 48 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 34679999999988888999999887766555
No 97
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=26.25 E-value=42 Score=34.15 Aligned_cols=30 Identities=13% Similarity=0.100 Sum_probs=25.2
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+||++|||.+.-..+..|++.+.+++.|
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~li 33 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLI 33 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 468999999999999999999887765444
No 98
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=26.16 E-value=50 Score=32.61 Aligned_cols=31 Identities=10% Similarity=0.043 Sum_probs=25.9
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCC-CCeEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNIT-TRVAHV 88 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~-~~lt~I 88 (485)
+.++|+++|||.+.-..+..|++.+ .+++.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~ 36 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTIL 36 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEE
Confidence 4578999999999989999999887 676655
No 99
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=26.10 E-value=42 Score=32.94 Aligned_cols=29 Identities=21% Similarity=0.066 Sum_probs=25.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+++|||.+...++..|++.+.+++.|
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~vi 35 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVV 35 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEE
Confidence 58999999999999999999988876554
No 100
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=26.08 E-value=52 Score=29.89 Aligned_cols=39 Identities=18% Similarity=0.123 Sum_probs=32.3
Q ss_pred HHHhcCCEEEEcCCCc-cccccccccchhHHHHHhcCC-CCE--EEEeCC
Q 011440 329 DQLNAVDCIIYAMGSL-FTSICPSLVLLGIGEIISSRS-CPK--VLLLNG 374 (485)
Q Consensus 329 ~AI~~ADlII~gPGSl-yTSI~P~Llv~GI~~AI~~s~-a~k--V~I~Nl 374 (485)
+|..+.|.|||=||-+ .||| -++|||+... .|. |=++|+
T Consensus 68 ~a~~~~dgiIINpgA~THtSv-------AlrDAl~~v~~~P~VEVHiSNi 110 (156)
T 1gtz_A 68 EARLNHCGIVINPAAYSHTSV-------AILDALNTCDGLPVVEVHISNI 110 (156)
T ss_dssp HHHHHCSEEEEECTTHHHHCH-------HHHHHHHTSTTCCEEEEESSCG
T ss_pred HhhhcCcEEEECchhhccccH-------HHHHHHHhcCCCCEEEEEecCc
Confidence 3445679999999999 5998 5899999988 887 667898
No 101
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=25.98 E-value=74 Score=25.86 Aligned_cols=46 Identities=13% Similarity=0.244 Sum_probs=30.6
Q ss_pred CCHHHHHHHhcCCEEEEcCCCccccccccccchhHH-HHHhcCCCCEEEE
Q 011440 323 ANSAVLDQLNAVDCIIYAMGSLFTSICPSLVLLGIG-EIISSRSCPKVLL 371 (485)
Q Consensus 323 ~~p~al~AI~~ADlII~gPGSlyTSI~P~Llv~GI~-~AI~~s~a~kV~I 371 (485)
+..+.++..+++|+||+|--. -+-+-.++ ..+. +.++.++||++.|
T Consensus 91 ~~~~I~~~a~~~dliV~G~~~--~~~~~~~~-Gs~~~~vl~~~~~pVlvv 137 (138)
T 3idf_A 91 PVEMVLEEAKDYNLLIIGSSE--NSFLNKIF-ASHQDDFIQKAPIPVLIV 137 (138)
T ss_dssp HHHHHHHHHTTCSEEEEECCT--TSTTSSCC-CCTTCHHHHHCSSCEEEE
T ss_pred hHHHHHHHHhcCCEEEEeCCC--cchHHHHh-CcHHHHHHhcCCCCEEEe
Confidence 345677777799999999653 23334444 5555 5567888998765
No 102
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=25.87 E-value=32 Score=34.84 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=23.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcC--CCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~--~~~lt~I 88 (485)
++||++|||.|.-..+..|++. +.+++.|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~li 31 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWY 31 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEE
Confidence 4799999999999999999987 4554433
No 103
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=25.84 E-value=42 Score=33.23 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=24.7
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|||+|||.+.-..+..|++.+.+++.|
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vl 30 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLL 30 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEE
Confidence 37999999999999999999988776554
No 104
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=25.70 E-value=40 Score=32.29 Aligned_cols=23 Identities=17% Similarity=0.378 Sum_probs=18.5
Q ss_pred CCCeEEEEeCCcchhHHHHHHHc
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKN 80 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~ 80 (485)
...++|+++||||++-++.=|++
T Consensus 147 ~~~~~vlIagGtGIaP~~s~l~~ 169 (304)
T 2bmw_A 147 PEANVIMLAGGTGITPMRTYLWR 169 (304)
T ss_dssp TTCEEEEEEEGGGHHHHHHHHHH
T ss_pred CCCCEEEEecCccHHHHHHHHHH
Confidence 35689999999999988766654
No 105
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.68 E-value=43 Score=33.96 Aligned_cols=31 Identities=6% Similarity=0.171 Sum_probs=26.3
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
...+|+++|||.+.-..+..|++.+.+++.|
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~li 35 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCI 35 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 3578999999999999999999888776554
No 106
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=25.59 E-value=86 Score=25.65 Aligned_cols=46 Identities=11% Similarity=0.247 Sum_probs=29.9
Q ss_pred CHHHHH-HH--hcCCEEEEcCCCccccccccccchhHHH-HHhcCCCCEEEE
Q 011440 324 NSAVLD-QL--NAVDCIIYAMGSLFTSICPSLVLLGIGE-IISSRSCPKVLL 371 (485)
Q Consensus 324 ~p~al~-AI--~~ADlII~gPGSlyTSI~P~Llv~GI~~-AI~~s~a~kV~I 371 (485)
..+.++ .. .++|+||+|-.. -+-+..+++..+.+ .++.++||++.|
T Consensus 96 ~~~I~~~~a~~~~~dliV~G~~~--~~~~~~~~~Gs~~~~vl~~~~~pVlvV 145 (146)
T 3s3t_A 96 KHTIEDYAKQHPEIDLIVLGATG--TNSPHRVAVGSTTSYVVDHAPCNVIVI 145 (146)
T ss_dssp HHHHHHHHHHSTTCCEEEEESCC--SSCTTTCSSCHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHHHhhcCCCEEEECCCC--CCCcceEEEcchHHHHhccCCCCEEEe
Confidence 355666 55 589999999543 23344556666664 456778887665
No 107
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=25.54 E-value=36 Score=31.17 Aligned_cols=25 Identities=12% Similarity=0.262 Sum_probs=19.7
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcC
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
....++|+++||||+.-++.-|+++
T Consensus 112 ~~~~~~vliagGtGitp~~~~l~~l 136 (243)
T 4eh1_A 112 ERERPVVLISAGVGATPMQAILHTL 136 (243)
T ss_dssp CCSSCEEEEEEGGGHHHHHHHHHHH
T ss_pred CCCCCEEEEEccccHHHHHHHHHHH
Confidence 4457899999999998887766554
No 108
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=25.45 E-value=42 Score=34.32 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=28.7
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCc
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGG 96 (485)
..+|+++|||.|.-..+..|++.+.+++.|=. .+-||
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~-~~~GG 40 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIES-KALGG 40 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcC-CCCCC
Confidence 46899999999999999999998887665543 34343
No 109
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=25.25 E-value=1e+02 Score=26.08 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=32.8
Q ss_pred CCHHHHHHHh--cCCEEEEcCCCccccccccccchhHHHH-HhcCCCCEEEEeCC
Q 011440 323 ANSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIGEI-ISSRSCPKVLLLNG 374 (485)
Q Consensus 323 ~~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~~A-I~~s~a~kV~I~Nl 374 (485)
+....++..+ ++|+||+|-... +-+-.+++..+.+. ++.++||++.|.+-
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~--~~~~~~~~Gsv~~~vl~~~~~PVlvv~~~ 157 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGK--LSLSHEFLGSTVMRVLRKTKKPVLIIKEV 157 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCC--CC--TTCCCHHHHHHHHHCSSCEEEECCC
T ss_pred hHHHHHHHHHHcCCCEEEECCCCC--CccccceechHHHHHHHhCCCCEEEEccC
Confidence 3456677777 899999985532 33445566667754 56788998777543
No 110
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=25.23 E-value=45 Score=33.89 Aligned_cols=37 Identities=14% Similarity=0.220 Sum_probs=28.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCc
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGG 96 (485)
..+|+++|||.|.-..+..|++.+.+++.|=. .+-||
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~-~~~GG 40 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEA-KELGG 40 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcC-CCCCC
Confidence 35899999999999999999998887665543 34443
No 111
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=25.12 E-value=54 Score=30.00 Aligned_cols=33 Identities=15% Similarity=0.053 Sum_probs=27.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeC
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPV 91 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv 91 (485)
..+|+++|||.+.-.++..|++.+.+++.|=.-
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 357999999999999999999998887765443
No 112
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=25.09 E-value=43 Score=34.05 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=25.1
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+||++|||.|.-..+..|++.+.+++.|
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~li 31 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACV 31 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 57999999999999999999988876544
No 113
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=25.09 E-value=46 Score=33.53 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=24.6
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
...++|+++|||-+.-..+..|++.+.+++++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~ 45 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLL 45 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 55679999999999999999999887765543
No 114
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=24.92 E-value=38 Score=35.26 Aligned_cols=22 Identities=23% Similarity=0.187 Sum_probs=20.3
Q ss_pred CCeEEEEeCCcchhHHHHHHHc
Q 011440 59 QPSLLVFSGGTAFNGVVEELKN 80 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~ 80 (485)
..+||++|||++...++..|.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~ 28 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAA 28 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHh
Confidence 3589999999999999999998
No 115
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=24.73 E-value=38 Score=34.49 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=23.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcC--CCCeEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNI--TTRVAH 87 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~--~~~lt~ 87 (485)
.++||++|||.+.-..+..|++. +.+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtv 33 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTM 33 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEE
Confidence 36899999999999999999987 445444
No 116
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=24.71 E-value=54 Score=35.51 Aligned_cols=33 Identities=12% Similarity=0.068 Sum_probs=27.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEe
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVt 90 (485)
....|||+|||.+....+..|.+.+.+++.|=-
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk 295 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCA 295 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeC
Confidence 346899999999999999999999888766543
No 117
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=24.57 E-value=39 Score=30.60 Aligned_cols=44 Identities=16% Similarity=0.119 Sum_probs=31.0
Q ss_pred HHhcCCEEEEcCCC-ccccccccccchhHHHHHhcCCCCEEEEeCC
Q 011440 330 QLNAVDCIIYAMGS-LFTSICPSLVLLGIGEIISSRSCPKVLLLNG 374 (485)
Q Consensus 330 AI~~ADlII~gPGS-lyTSI~P~Llv~GI~~AI~~s~a~kV~I~Nl 374 (485)
.|+++|.||+ ||. -++..+-.+-..++-+++.+...|..-||.+
T Consensus 37 ~l~~~D~lil-PG~g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG 81 (211)
T 4gud_A 37 VVLAADKLFL-PGVGTASEAMKNLTERDLIELVKRVEKPLLGICLG 81 (211)
T ss_dssp HHHHCSEEEE-CCCSCHHHHHHHHHHTTCHHHHHHCCSCEEEETHH
T ss_pred HHhCCCEEEE-CCCCCHHHHHHHHHhcChHHHHHHcCCCEEEEchh
Confidence 4667898888 452 2344455555566677788888899999985
No 118
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=24.57 E-value=50 Score=32.71 Aligned_cols=31 Identities=13% Similarity=0.057 Sum_probs=26.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCC-eEEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTR-VAHVL 89 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~-lt~IV 89 (485)
..+|+++|||-+...++..|++.+.+ ++.|=
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E 35 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLE 35 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 36899999999999999999999887 76654
No 119
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=24.53 E-value=47 Score=34.41 Aligned_cols=29 Identities=21% Similarity=0.198 Sum_probs=25.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+|+|||.+...++..|++.+.+++.|
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~li 36 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLL 36 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999988776655
No 120
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=24.48 E-value=47 Score=31.39 Aligned_cols=30 Identities=10% Similarity=-0.001 Sum_probs=26.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
.+|+++|||.+.-.++..|++.+.+++.|=
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie 38 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFE 38 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEe
Confidence 589999999999999999999888876553
No 121
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=24.30 E-value=67 Score=30.16 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=24.8
Q ss_pred CCeE-EEEeCCcchh----HHHHHHHcCCCCeEEEEeC
Q 011440 59 QPSL-LVFSGGTAFN----GVVEELKNITTRVAHVLPV 91 (485)
Q Consensus 59 ~~~I-Vv~gGGTG~~----~ll~gLk~~~~~lt~IVtv 91 (485)
++|| +.++||.+.. .+++.|++.+.++..|+|-
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 4566 5589988876 5778888888888888754
No 122
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=24.28 E-value=56 Score=30.26 Aligned_cols=39 Identities=31% Similarity=0.365 Sum_probs=32.0
Q ss_pred HHHhc-CCEEEEcCCCc-cccccccccchhHHHHHhcCCCCE--EEEeCC
Q 011440 329 DQLNA-VDCIIYAMGSL-FTSICPSLVLLGIGEIISSRSCPK--VLLLNG 374 (485)
Q Consensus 329 ~AI~~-ADlII~gPGSl-yTSI~P~Llv~GI~~AI~~s~a~k--V~I~Nl 374 (485)
+|..+ .|.|||=||-+ .||| -++|||+....|. |=++|+
T Consensus 73 ~a~~~~~dgIIINpgAyTHtSv-------AlrDAl~~v~~P~VEVHiSNi 115 (176)
T 2c4w_A 73 ESVGSEYEGIIINPGAFSHTSI-------AIADAIMLAGKPVIEVHLTNI 115 (176)
T ss_dssp HHHSSSCCEEEEECGGGGGTCH-------HHHHHHHTSSSCEEEEESSCG
T ss_pred HhccCCeeEEEECcchhccchH-------HHHHHHHhCCCCEEEEEecCc
Confidence 34445 78999999999 5998 5899999998887 667888
No 123
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=24.28 E-value=2.3e+02 Score=27.60 Aligned_cols=54 Identities=17% Similarity=0.323 Sum_probs=39.7
Q ss_pred CCHHHHHHHhcCCEEEEcCCCccc--------------cccccccch---hHHHHHhcCCCCEEEEeCCCCC
Q 011440 323 ANSAVLDQLNAVDCIIYAMGSLFT--------------SICPSLVLL---GIGEIISSRSCPKVLLLNGLED 377 (485)
Q Consensus 323 ~~p~al~AI~~ADlII~gPGSlyT--------------SI~P~Llv~---GI~~AI~~s~a~kV~I~Nlt~d 377 (485)
.++++++.++++|++|+- +++++ +-.-.+-.. +..+++++.+++++++.-+.+.
T Consensus 205 ~~~~~~~~~~~~D~li~e-at~~~d~e~~~~glk~r~~~~~gH~s~~~~~eA~~~a~~~~~k~lvLtH~s~~ 275 (321)
T 3jxp_A 205 VDEKLLAMMHGADCLLVD-GTLWEDDEMQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNT 275 (321)
T ss_dssp CCHHHHHHHHHCSEEEEE-CCCSSTTHHHHHTSCSCCCC-CCCCCSSSTTCHHHHHTTCSSSEEEEESBCTT
T ss_pred CCHHHHHHhcCCCEEEEe-CCCCCcHHHhhccccccccCCCcccCCCCHHHHHHHHHhCCCCeEEEEEeCCC
Confidence 567899999999988873 44444 233466666 7777788888999999888544
No 124
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=24.19 E-value=38 Score=30.76 Aligned_cols=42 Identities=29% Similarity=0.426 Sum_probs=33.4
Q ss_pred HHHHHHh----cCCEEEEcCCCc-cccccccccchhHHHHHhcCCCCE--EEEeCC
Q 011440 326 AVLDQLN----AVDCIIYAMGSL-FTSICPSLVLLGIGEIISSRSCPK--VLLLNG 374 (485)
Q Consensus 326 ~al~AI~----~ADlII~gPGSl-yTSI~P~Llv~GI~~AI~~s~a~k--V~I~Nl 374 (485)
+.++.|. +.|.|||=||-+ .||| -++|||+....|. |=++|+
T Consensus 56 eLId~Ih~a~~~~dgiIINpgA~THtSv-------AlrDAl~~v~~P~VEVHiSNi 104 (154)
T 1uqr_A 56 SLINRIHQAFQNTDFIIINPGAFTHTSV-------AIRDALLAVSIPFIEVHLSNV 104 (154)
T ss_dssp HHHHHHHHTTTTCCEEEEECTTHHHHCH-------HHHHHHHHHTCCEEEEESSCG
T ss_pred HHHHHHHHhhhcCcEEEECcchhccchH-------HHHHHHHhCCCCEEEEEecCc
Confidence 4455554 458999999999 5998 5899999888887 677898
No 125
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=24.14 E-value=47 Score=34.04 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=26.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
...+|+++|||.|.-..+..|++.+.+++.|=
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE 41 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVE 41 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEE
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEe
Confidence 34689999999999999999999888865553
No 126
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.09 E-value=45 Score=34.45 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=27.8
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCc
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGG 96 (485)
.+||++|||.|.-..+..|++.+.+++.|= -.+-||
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE-~~~~GG 38 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVE-KSRLGG 38 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEE-SSSTTH
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEe-CCCcCc
Confidence 579999999999999999999887765443 334343
No 127
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=24.04 E-value=55 Score=32.59 Aligned_cols=31 Identities=23% Similarity=0.135 Sum_probs=26.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCC-CeEEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITT-RVAHVL 89 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~-~lt~IV 89 (485)
...|||+|||.+....+..|.+.+. +++.|=
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE 37 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLD 37 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEe
Confidence 4589999999999999999999887 666553
No 128
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.02 E-value=61 Score=26.93 Aligned_cols=31 Identities=26% Similarity=0.246 Sum_probs=25.9
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
.++|+++|+|.=...+++.|.+.+.+++++-
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 4689999999888899999998888776654
No 129
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=24.00 E-value=37 Score=33.38 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=24.2
Q ss_pred CeEEEEeCCcchhHHHHHHHcC--CCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~--~~~lt~I 88 (485)
++|+++|||-+...++..|++. +.+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~ 31 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIV 31 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEE
Confidence 4799999999999999999988 6665544
No 130
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=23.99 E-value=53 Score=30.69 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=25.7
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+++|||.+.-..+..|++.+.+++.|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li 30 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLM 30 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 37999999999999999999988887766
No 131
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=23.89 E-value=45 Score=35.76 Aligned_cols=30 Identities=17% Similarity=0.183 Sum_probs=25.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+||++|||.+...++..|.+.+.+++.|
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~Li 52 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIY 52 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999999999987765544
No 132
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=23.67 E-value=52 Score=31.04 Aligned_cols=29 Identities=14% Similarity=0.008 Sum_probs=25.2
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+++|||.+.-..+..|++.+.+++.|
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li 45 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAIL 45 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEE
Confidence 57999999999999999999988886555
No 133
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=23.18 E-value=44 Score=32.27 Aligned_cols=24 Identities=13% Similarity=0.248 Sum_probs=19.6
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++++|+||||+.-++.=|++.
T Consensus 157 ~~~~~vlIagGtGIaP~~s~l~~~ 180 (310)
T 3vo2_A 157 PNATVIMLATGTGIAPFRSFLWKM 180 (310)
T ss_dssp TTCEEEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCEEEEeCCcchhHHHHHHHHH
Confidence 457899999999999888766654
No 134
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=23.15 E-value=48 Score=26.10 Aligned_cols=30 Identities=17% Similarity=0.092 Sum_probs=22.6
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCC-CCeEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNIT-TRVAH 87 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~-~~lt~ 87 (485)
++++|+++|+|.=...+++.|.+.+ .++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~ 34 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTV 34 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 3568999998877788899998876 44433
No 135
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=23.12 E-value=54 Score=34.04 Aligned_cols=33 Identities=27% Similarity=0.225 Sum_probs=27.5
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
+....+|+++|||-+.-.++..|++.+.+++.|
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~li 121 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLV 121 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEE
Confidence 355779999999999999999999988765544
No 136
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=23.01 E-value=51 Score=33.35 Aligned_cols=30 Identities=17% Similarity=0.097 Sum_probs=26.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
.+||++|||.|.-..+..|++.+.+++.|=
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie 33 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVE 33 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 579999999999999999999888766553
No 137
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=22.78 E-value=54 Score=33.61 Aligned_cols=25 Identities=4% Similarity=0.153 Sum_probs=22.3
Q ss_pred CeEEEEeCCcchhHHHHHHHc---CCCC
Q 011440 60 PSLLVFSGGTAFNGVVEELKN---ITTR 84 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~---~~~~ 84 (485)
++|+++|||.+.-..+..|++ .+.+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~ 30 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAE 30 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCC
Confidence 589999999999999999998 7766
No 138
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=22.76 E-value=52 Score=33.71 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=25.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+|+++|||.|.-..+..|.+.+.+++.|
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~li 54 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVV 54 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 468999999999999999999988875543
No 139
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=22.70 E-value=50 Score=33.15 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=24.4
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCC--CeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITT--RVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~--~lt~I 88 (485)
.++|+|+|||-+.-..+..|++.+. +++++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vl 33 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLV 33 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEE
Confidence 3689999999988888999998877 55543
No 140
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=22.65 E-value=55 Score=33.04 Aligned_cols=30 Identities=10% Similarity=0.056 Sum_probs=25.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCC--CeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITT--RVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~--~lt~I 88 (485)
..+|+++|||-+.-.++..|++.+. +++.+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~ 37 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLF 37 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEE
Confidence 4689999999999999999998876 54433
No 141
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=22.53 E-value=53 Score=33.53 Aligned_cols=29 Identities=17% Similarity=0.140 Sum_probs=25.5
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+||++|||.|.-..+..|++.+.+++.|
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~li 35 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAV 35 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 57999999999999999999988876655
No 142
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=22.50 E-value=54 Score=31.37 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=25.0
Q ss_pred eEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 61 SLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 61 ~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.|+++|||-+...++..|.+.+.+++.|
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 4899999999999999999999887655
No 143
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=22.46 E-value=45 Score=33.72 Aligned_cols=25 Identities=16% Similarity=0.325 Sum_probs=21.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCC
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITT 83 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~ 83 (485)
.++||++|||.+.-..+..|++...
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~ 27 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKP 27 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCc
Confidence 4689999999999999999998743
No 144
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=22.46 E-value=51 Score=29.83 Aligned_cols=30 Identities=10% Similarity=0.094 Sum_probs=26.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
|||+++|+|.=...+++.|.+.+.++++|-
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid 30 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIIN 30 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 589999999999999999999888877664
No 145
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=22.36 E-value=49 Score=30.98 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=22.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcC---CCCeEEEEe
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNI---TTRVAHVLP 90 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~---~~~lt~IVt 90 (485)
..++++++||||+.-++.=|+++ ..+++.+..
T Consensus 110 ~~~~lliagGtGitP~~s~l~~l~~~~~~v~l~~~ 144 (262)
T 1ep3_B 110 TDKILIIGGGIGVPPLYELAKQLEKTGCQMTILLG 144 (262)
T ss_dssp TSEEEEEEEGGGSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHHcCCeEEEEEE
Confidence 67899999999999876655544 344555543
No 146
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=22.28 E-value=78 Score=25.81 Aligned_cols=37 Identities=8% Similarity=0.167 Sum_probs=25.6
Q ss_pred CHHHHHHHh--cCCEEEEcCCCccccccccccchhHH-HHHhcCCCCEEEE
Q 011440 324 NSAVLDQLN--AVDCIIYAMGSLFTSICPSLVLLGIG-EIISSRSCPKVLL 371 (485)
Q Consensus 324 ~p~al~AI~--~ADlII~gPGSlyTSI~P~Llv~GI~-~AI~~s~a~kV~I 371 (485)
..+.++..+ ++|+||+|--.. .+. +.++.++||++.|
T Consensus 98 ~~~I~~~a~~~~~dliV~G~~g~-----------sv~~~vl~~a~~PVlvv 137 (138)
T 1q77_A 98 SEEVKKFVEGKGYELVVWACYPS-----------AYLCKVIDGLNLASLIV 137 (138)
T ss_dssp HHHHHHHHTTSCCSEEEECSCCG-----------GGTHHHHHHSSSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCC-----------chHHHHHHhCCCceEee
Confidence 456667777 799999996543 333 5567888887654
No 147
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=22.17 E-value=48 Score=33.96 Aligned_cols=31 Identities=19% Similarity=0.112 Sum_probs=26.6
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEEEe
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVt 90 (485)
..|+++|||.|.-..+..|.+.+.+++.|=.
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk 57 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEE 57 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeC
Confidence 4899999999999999999999888766544
No 148
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=22.09 E-value=53 Score=33.21 Aligned_cols=26 Identities=15% Similarity=0.075 Sum_probs=23.2
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCC
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTR 84 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~ 84 (485)
..+||++|||.+.-..+..|++.+.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~ 29 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWE 29 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcC
Confidence 46899999999999999999988764
No 149
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=22.07 E-value=69 Score=26.07 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=24.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.++|+++|+|.=...+++.|.+.+.+++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~ 35 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAV 35 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 457999999888888999999888776654
No 150
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=22.07 E-value=43 Score=33.91 Aligned_cols=29 Identities=14% Similarity=-0.036 Sum_probs=23.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcC--CCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~--~~~lt~I 88 (485)
++||++|||.|.-..+..|++. +.+++.|
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~li 31 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAY 31 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEE
Confidence 4799999999999999999987 5555443
No 151
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=22.00 E-value=55 Score=33.32 Aligned_cols=30 Identities=7% Similarity=0.076 Sum_probs=25.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+||++|||.|.-..+..|++.+.+++.|
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~li 35 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCI 35 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 357999999999999999999988776544
No 152
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=21.88 E-value=48 Score=31.93 Aligned_cols=24 Identities=8% Similarity=0.231 Sum_probs=19.2
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++|+++||||++-++.=|+++
T Consensus 164 ~~~~~vlIagGtGIaP~~s~l~~l 187 (314)
T 2rc5_A 164 FSGDIMFLATGTGIAPFIGMSEEL 187 (314)
T ss_dssp BCSCEEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHH
Confidence 356899999999999887766644
No 153
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=21.86 E-value=40 Score=31.47 Aligned_cols=24 Identities=13% Similarity=0.368 Sum_probs=19.0
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++|+++||||+.-++.=++++
T Consensus 135 ~~~~~vliagGtGiaP~~~~l~~l 158 (270)
T 2cnd_A 135 NARRLAMICGGSGITPMYQIIQAV 158 (270)
T ss_dssp CCSEEEEEEEGGGHHHHHHHHHHH
T ss_pred cCCEEEEEeccccHHHHHHHHHHH
Confidence 457899999999999887655543
No 154
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=21.75 E-value=1.3e+02 Score=29.74 Aligned_cols=38 Identities=13% Similarity=0.056 Sum_probs=30.6
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDG 95 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDG 95 (485)
+++|||++|-..=....+++|.+..+++.+|||--|.-
T Consensus 1 ~~mrivf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~ 38 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRP 38 (314)
T ss_dssp CCCEEEEEECSGGGHHHHHHHHHSSSEEEEEECCCC--
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCCCc
Confidence 46899999888767778889988788999999988864
No 155
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=21.59 E-value=57 Score=33.65 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=36.1
Q ss_pred HHHhcCCEEEEcCCCccccccccccchhHHHHHhcCCCCEEEEeCC
Q 011440 329 DQLNAVDCIIYAMGSLFTSICPSLVLLGIGEIISSRSCPKVLLLNG 374 (485)
Q Consensus 329 ~AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~~s~a~kV~I~Nl 374 (485)
+.|++||+||-|=|++=..-+--=.+-||.+.-++...|+|.||--
T Consensus 283 ~~l~~ADLVITGEG~~D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~ 328 (383)
T 3cwc_A 283 ACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGS 328 (383)
T ss_dssp HHHHHCSEEEECCEESCC----CHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhhcCCCEEEECCCCCcCcCCCCcHHHHHHHHHHHhCCCEEEEeCC
Confidence 5788999999999998666655667789999888888999999864
No 156
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=21.53 E-value=50 Score=31.83 Aligned_cols=24 Identities=13% Similarity=0.252 Sum_probs=19.2
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++|+++||||+.-++.=|++.
T Consensus 161 ~~~~~vlIagGtGIaP~~s~l~~~ 184 (314)
T 1fnb_A 161 PNATIIMLGTGTGIAPFRSFLWKM 184 (314)
T ss_dssp TTCEEEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHH
Confidence 356899999999999887766544
No 157
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=21.43 E-value=61 Score=30.29 Aligned_cols=29 Identities=10% Similarity=-0.098 Sum_probs=24.5
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCC-CeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITT-RVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~-~lt~I 88 (485)
.+|+++|||-+.-..+..|++.+. +++.|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~li 31 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLF 31 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEE
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEE
Confidence 379999999999999999998877 66544
No 158
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=21.41 E-value=39 Score=31.68 Aligned_cols=24 Identities=25% Similarity=0.448 Sum_probs=19.2
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++|+++||||+.-++.-|+++
T Consensus 145 ~~~~~vliagGtGIaP~~~~l~~l 168 (275)
T 1umk_A 145 TVKSVGMIAGGTGITPMLQVIRAI 168 (275)
T ss_dssp ECSEEEEEEEGGGHHHHHHHHHHH
T ss_pred CCceEEEEecCccHhHHHHHHHHH
Confidence 356899999999999887766644
No 159
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=21.32 E-value=39 Score=33.52 Aligned_cols=48 Identities=13% Similarity=0.099 Sum_probs=31.0
Q ss_pred HHHhcCCEEEEcCCCccccccc-------c-ccchhHHHHHhcCCCCEEEEeCCCCC
Q 011440 329 DQLNAVDCIIYAMGSLFTSICP-------S-LVLLGIGEIISSRSCPKVLLLNGLED 377 (485)
Q Consensus 329 ~AI~~ADlII~gPGSlyTSI~P-------~-Llv~GI~~AI~~s~a~kV~I~Nlt~d 377 (485)
+++++||+||+.-|.+..-=+- | =.+..+.++|.+. ||...|.|+++|
T Consensus 65 ~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNP 120 (314)
T 3nep_X 65 GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANP 120 (314)
T ss_dssp GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSS
T ss_pred HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCc
Confidence 5799999999998877542110 1 2367888899886 566666666554
No 160
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=21.30 E-value=65 Score=32.65 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=26.6
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
+....+|+++|||-+.-..+..|++.+.+++.+
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~Vl 73 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTIL 73 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEE
Confidence 345779999999999888999999887665544
No 161
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=21.21 E-value=70 Score=35.37 Aligned_cols=40 Identities=20% Similarity=0.355 Sum_probs=30.1
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCC-CeEEEEeCCC---CCcchH
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITT-RVAHVLPVSD---DGGSTA 99 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~-~lt~IVtv~D---DGGSSG 99 (485)
..+|||+|||.+...++..|.+.+. +++.| --.+ .||||+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vl-E~~~~~~~~gss~ 47 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVL-DQGPLNMPGGSTS 47 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEE-CSSCTTCCCSGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEE-eCCCCCCCcccce
Confidence 4689999999999999999999886 65544 3333 256665
No 162
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=21.12 E-value=74 Score=32.17 Aligned_cols=32 Identities=25% Similarity=0.246 Sum_probs=25.9
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
...++|+|+|||-+.-..+..|++.+.+++.+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~ 40 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVL 40 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 44679999999999988999998877665544
No 163
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=21.08 E-value=1.6e+02 Score=26.24 Aligned_cols=73 Identities=8% Similarity=-0.120 Sum_probs=44.2
Q ss_pred CHHHHHHHhcCCEEEEcCCCccccccccccchhHHHHHhc------------CCCCEEEEeCC-CCCCcCCCCCHHHHHH
Q 011440 324 NSAVLDQLNAVDCIIYAMGSLFTSICPSLVLLGIGEIISS------------RSCPKVLLLNG-LEDRETSGFSASCFVT 390 (485)
Q Consensus 324 ~p~al~AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~~------------s~a~kV~I~Nl-t~dgET~g~sa~d~v~ 390 (485)
-.+..+.|.+||.||++-=-.+-|+=+. ++..-|-+.. -+.+++++.-. +.. .+..+..+++
T Consensus 58 ~~~~~~~i~~AD~iV~~sP~y~~~~p~~--lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~---g~~~~~~~l~ 132 (192)
T 3fvw_A 58 VAHAREEVQEADAIWIFSPVYNYAIPGP--VKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGA---SPEEVFEDYR 132 (192)
T ss_dssp HHHHHHHHHHCSEEEEECCCBTTBCCHH--HHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC------CCSHHHH
T ss_pred HHHHHHHHHhCCEEEEECcccccCCCHH--HHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCCc---chhHHHHHHH
Confidence 3678899999999999865555554332 2333344432 23456665443 322 2345678999
Q ss_pred HHHHHhcccCC
Q 011440 391 AITDALNRAYG 401 (485)
Q Consensus 391 al~~~lg~~~~ 401 (485)
.+..++|....
T Consensus 133 ~~l~~~G~~~v 143 (192)
T 3fvw_A 133 SLLPFIRMHLV 143 (192)
T ss_dssp HHHHHTTCEEC
T ss_pred HHHHHcCCeee
Confidence 99999887643
No 164
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=20.84 E-value=40 Score=34.93 Aligned_cols=29 Identities=24% Similarity=0.346 Sum_probs=23.2
Q ss_pred CCeEEEEeCCcchhHHHHHHHcC--CCCeEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNI--TTRVAH 87 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~--~~~lt~ 87 (485)
..+||++|||.|.-..+..|++. +.+++.
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~l 41 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLI 41 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEE
Confidence 46899999999999999999876 444443
No 165
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.78 E-value=66 Score=30.04 Aligned_cols=49 Identities=8% Similarity=0.142 Sum_probs=31.8
Q ss_pred CeEEEE--eCCcchhHHHHHHHcCCC--CeEEEEeCCCCCcchHHHHHHcCCCC
Q 011440 60 PSLLVF--SGGTAFNGVVEELKNITT--RVAHVLPVSDDGGSTAEIVRVLGGPA 109 (485)
Q Consensus 60 ~~IVv~--gGGTG~~~ll~gLk~~~~--~lt~IVtv~DDGGSSG~LR~~~g~~~ 109 (485)
+||++| |.|+-+..+++.|.+-.. ++.+||+--|+-. .-+.-+.+|+|.
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~-~~~~A~~~gIp~ 54 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAY-AIERCKKHNVEC 54 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCH-HHHHHHHHTCCE
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChH-HHHHHHHcCCCE
Confidence 489999 555556678888886544 7888888766532 122235567663
No 166
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=20.77 E-value=1.4e+02 Score=26.98 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=46.0
Q ss_pred CCHHHHHHHhcCCEEEEcCCCccccccccccchhHHHHHhc-----CCCCEEEEeCCCCCCcCCCCCHHHHHHHHHHHhc
Q 011440 323 ANSAVLDQLNAVDCIIYAMGSLFTSICPSLVLLGIGEIISS-----RSCPKVLLLNGLEDRETSGFSASCFVTAITDALN 397 (485)
Q Consensus 323 ~~p~al~AI~~ADlII~gPGSlyTSI~P~Llv~GI~~AI~~-----s~a~kV~I~Nlt~dgET~g~sa~d~v~al~~~lg 397 (485)
.-.+..+.|.+||.||++-=-.+-|+-+. ++..-+-+.. -..+++.+... ..|...|..+..|++.+..++|
T Consensus 62 ~~~~l~~~i~~AD~iv~~sP~y~~~~~~~--lK~~iD~~~~~~~~~~~gK~~~~~~~-s~g~~gg~~a~~~Lr~~l~~lg 138 (193)
T 3svl_A 62 TVEALAEQIRQADGVVIVTPEYNYSVPGG--LKNAIDWLSRLPDQPLAGKPVLIQTS-SMGVIGGARCQYHLRQILVFLD 138 (193)
T ss_dssp HHHHHHHHHHHSSEEEEEECCBTTBCCHH--HHHHHHHHHTSTTCTTTTCEEEEEEE-CSSTTTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCEEEEEecccCCCCCHH--HHHHHHHHhhcCccccCCCeEEEEEe-CCCCcchHHHHHHHHHHHHHCC
Confidence 34577899999999998865555555332 2333344432 24566665532 2233335568889999998887
Q ss_pred ccC
Q 011440 398 RAY 400 (485)
Q Consensus 398 ~~~ 400 (485)
...
T Consensus 139 ~~v 141 (193)
T 3svl_A 139 AMV 141 (193)
T ss_dssp CEE
T ss_pred CEE
Confidence 653
No 167
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=20.63 E-value=46 Score=31.21 Aligned_cols=24 Identities=17% Similarity=0.307 Sum_probs=20.1
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++|+++||||+.-++.=++++
T Consensus 121 ~~~~~vliagG~GitP~~~~l~~l 144 (271)
T 4fk8_A 121 PGKTLWMLSTGTGLAPFMSIIRDP 144 (271)
T ss_dssp CCSEEEEEECGGGGHHHHHHTTCH
T ss_pred CCCeEEEEECCEEHHHHHHHHHHH
Confidence 457899999999999988877654
No 168
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=20.62 E-value=50 Score=34.04 Aligned_cols=27 Identities=19% Similarity=0.162 Sum_probs=21.8
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcCC
Q 011440 56 THTQPSLLVFSGGTAFNGVVEELKNIT 82 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~~~ll~gLk~~~ 82 (485)
+....+||++|||.+.-..+..|++.+
T Consensus 3 ~~~~~~vvIIG~G~aGl~aA~~l~~~g 29 (460)
T 1cjc_A 3 QEQTPQICVVGSGPAGFYTAQHLLKHH 29 (460)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHHC
T ss_pred CCCCceEEEECcCHHHHHHHHHHHhcC
Confidence 345679999999999999999998876
No 169
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=20.62 E-value=45 Score=32.09 Aligned_cols=29 Identities=10% Similarity=0.013 Sum_probs=24.9
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+|+|||.....++..|.+.+.+++.|
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vl 31 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMT 31 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 47999999999999999999988876654
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=20.56 E-value=79 Score=31.08 Aligned_cols=38 Identities=18% Similarity=0.354 Sum_probs=27.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeCCCCCc
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv~DDGG 96 (485)
..+||++|||.+.-..+..|++.+.+..+++--.++|.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~ 41 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGR 41 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCC
Confidence 35899999999999999999998755443333334443
No 171
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=20.54 E-value=65 Score=31.12 Aligned_cols=30 Identities=17% Similarity=0.048 Sum_probs=25.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
...|||+|||.....++..|.+.+.+++.|
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vl 35 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHIL 35 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEE
Confidence 458999999999999999999888776655
No 172
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=20.52 E-value=61 Score=33.16 Aligned_cols=29 Identities=21% Similarity=0.185 Sum_probs=25.1
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+||++|||.+.-..+..|++.+.+++.|
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~li 35 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIV 35 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 57999999999999999999988885544
No 173
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=20.45 E-value=54 Score=33.19 Aligned_cols=29 Identities=14% Similarity=0.039 Sum_probs=23.7
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
++|||+|||.+.-..+.-|.+.+.+++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEE
Confidence 57999999998888888888888776654
No 174
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=20.34 E-value=58 Score=30.26 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=21.0
Q ss_pred CCCCCeEEEEeCCcch--hHHHHHHHcCCCCeEEE
Q 011440 56 THTQPSLLVFSGGTAF--NGVVEELKNITTRVAHV 88 (485)
Q Consensus 56 ~~~~~~IVv~gGGTG~--~~ll~gLk~~~~~lt~I 88 (485)
+..+++.|++.||||. ..+++.|.+.+.+++++
T Consensus 8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~ 42 (292)
T 1vl0_A 8 HHHHHMKILITGANGQLGREIQKQLKGKNVEVIPT 42 (292)
T ss_dssp ----CEEEEEESTTSHHHHHHHHHHTTSSEEEEEE
T ss_pred cccccceEEEECCCChHHHHHHHHHHhCCCeEEec
Confidence 3455677778888884 67888888776655554
No 175
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=20.24 E-value=1.9e+02 Score=27.25 Aligned_cols=64 Identities=13% Similarity=0.167 Sum_probs=35.8
Q ss_pred HHHHHHHhcCC-EEEEcCCCcccc--ccccccchhHHHHHhcCCCCEEEEeCCCCC---CcCC---CCCHHHHHHHHHHH
Q 011440 325 SAVLDQLNAVD-CIIYAMGSLFTS--ICPSLVLLGIGEIISSRSCPKVLLLNGLED---RETS---GFSASCFVTAITDA 395 (485)
Q Consensus 325 p~al~AI~~AD-lII~gPGSlyTS--I~P~Llv~GI~~AI~~s~a~kV~I~Nlt~d---gET~---g~sa~d~v~al~~~ 395 (485)
.++.+++++|| +||+| || +.|.- ++....++. ..++++.|.... ...+ ..++.+.+..|.+.
T Consensus 172 ~~a~~~~~~adl~lviG-----TSl~V~P~~---~l~~~a~~~-g~~~i~IN~~~~~~d~~~~~~i~~~~~~~l~~l~~~ 242 (246)
T 1yc5_A 172 REAIGLSSRASLMIVLG-----SSLVVYPAA---ELPLITVRS-GGKLVIVNLGETPFDDIATLKYNMDVVEFARRVMEE 242 (246)
T ss_dssp HHHHHHHHHCSEEEEES-----CCSCEETGG---GHHHHHHHH-TCEEEEECSSCCTTGGGCSEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEEC-----CCCcchhHH---HHHHHHHHc-CCeEEEEeCCCCCCCcceeEEEeCCHHHHHHHHHHH
Confidence 56778899999 45555 34 23432 222222222 345677787321 1111 34677888888777
Q ss_pred hc
Q 011440 396 LN 397 (485)
Q Consensus 396 lg 397 (485)
||
T Consensus 243 lg 244 (246)
T 1yc5_A 243 GG 244 (246)
T ss_dssp HT
T ss_pred cC
Confidence 76
No 176
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=20.16 E-value=68 Score=29.90 Aligned_cols=44 Identities=14% Similarity=0.053 Sum_probs=28.3
Q ss_pred CCHHHHHHHhcCCEEEEcCC---Cccc---cccc--cccchhHHHHHhcCCC
Q 011440 323 ANSAVLDQLNAVDCIIYAMG---SLFT---SICP--SLVLLGIGEIISSRSC 366 (485)
Q Consensus 323 ~~p~al~AI~~ADlII~gPG---SlyT---SI~P--~Llv~GI~~AI~~s~a 366 (485)
.+|+.+..+.+.-.+|++|- .+|. |+++ .+++.-|.+|+....-
T Consensus 138 ~h~~Nm~~L~~~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~~~~ 189 (201)
T 3lqk_A 138 LNGINIMRLMATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRGQQY 189 (201)
T ss_dssp TTHHHHHHHHTSTTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTTCCC
T ss_pred HhHHHHHHHHHCCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhcCCC
Confidence 45667888888888888877 5554 5552 3455566666665443
No 177
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=20.14 E-value=57 Score=32.99 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=25.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+++|||-+...++..|++.+.+++.|
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vl 35 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLV 35 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 57999999999999999999988876655
No 178
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=20.12 E-value=66 Score=32.10 Aligned_cols=24 Identities=25% Similarity=0.476 Sum_probs=19.4
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcC
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~ 81 (485)
...++|++|||||+.-++.=|+.+
T Consensus 265 ~~~~~vlIagGtGitP~~s~l~~l 288 (403)
T 1cqx_A 265 AKTPIVLISGGVGLTPMVSMLKVA 288 (403)
T ss_dssp CCSCEEEEESSCCHHHHHHHHHHH
T ss_pred CCCCEEEEEecccHhhHHHHHHHH
Confidence 456899999999999887766654
No 179
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=20.06 E-value=64 Score=32.72 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=25.2
Q ss_pred CeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 60 ~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
.+|+++|||.+.-..+..|++.+.+++.|
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~li 32 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIV 32 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 47999999999999999999988776554
No 180
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=20.05 E-value=67 Score=30.91 Aligned_cols=30 Identities=10% Similarity=-0.032 Sum_probs=25.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcCCCCeEEE
Q 011440 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (485)
Q Consensus 59 ~~~IVv~gGGTG~~~ll~gLk~~~~~lt~I 88 (485)
..+||++|||-+.-..+..|++.+.+++.|
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li 43 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRII 43 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 468999999999999999999887776544
No 181
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=20.02 E-value=53 Score=34.07 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=30.1
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcCCCCeEEEEeC
Q 011440 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPV 91 (485)
Q Consensus 57 ~~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IVtv 91 (485)
-++++|+++|||.-....++.|.+.+.++++|-+-
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 35789999999999999999999999888877653
No 182
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=20.02 E-value=61 Score=30.22 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=28.4
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcCCCCeEEEE
Q 011440 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (485)
Q Consensus 58 ~~~~IVv~gGGTG~~~ll~gLk~~~~~lt~IV 89 (485)
.+.+|+++|||--.-.++..|++++.++|.|.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~ 182 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILH 182 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEEC
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeec
Confidence 46799999999999999999999999988764
Done!