Query 011450
Match_columns 485
No_of_seqs 310 out of 2406
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 01:29:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011450.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011450hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 6.4E-88 1.4E-92 686.9 35.1 320 42-375 2-351 (371)
2 PRK14296 chaperone protein Dna 100.0 3.8E-75 8.2E-80 604.7 34.5 331 43-375 3-362 (372)
3 PRK14298 chaperone protein Dna 100.0 7.9E-74 1.7E-78 595.8 36.3 333 41-375 2-352 (377)
4 PRK14287 chaperone protein Dna 100.0 8.8E-74 1.9E-78 594.6 36.0 329 43-375 3-349 (371)
5 PRK14276 chaperone protein Dna 100.0 3.2E-73 6.9E-78 592.3 36.5 331 43-374 3-356 (380)
6 PRK14278 chaperone protein Dna 100.0 6.8E-73 1.5E-77 589.2 37.6 331 43-375 2-351 (378)
7 PRK14280 chaperone protein Dna 100.0 9.8E-73 2.1E-77 587.9 36.9 332 43-375 3-354 (376)
8 PRK14288 chaperone protein Dna 100.0 9.9E-73 2.1E-77 586.3 35.1 320 43-374 2-345 (369)
9 PRK14277 chaperone protein Dna 100.0 1.4E-72 3E-77 588.6 36.2 324 42-375 3-366 (386)
10 PTZ00037 DnaJ_C chaperone prot 100.0 8.3E-73 1.8E-77 593.7 33.3 340 22-376 6-368 (421)
11 PRK14286 chaperone protein Dna 100.0 3.1E-72 6.7E-77 583.2 34.6 328 43-375 3-358 (372)
12 PRK14297 chaperone protein Dna 100.0 1.1E-71 2.4E-76 580.8 36.4 332 43-375 3-359 (380)
13 PRK14284 chaperone protein Dna 100.0 1.4E-71 3.1E-76 581.8 35.2 327 44-375 1-367 (391)
14 PRK14281 chaperone protein Dna 100.0 8.3E-71 1.8E-75 576.9 37.3 329 43-374 2-372 (397)
15 PRK14282 chaperone protein Dna 100.0 5.6E-71 1.2E-75 573.6 35.5 333 43-376 3-365 (369)
16 PRK14279 chaperone protein Dna 100.0 1.2E-70 2.7E-75 574.5 33.1 315 43-375 8-379 (392)
17 PRK14285 chaperone protein Dna 100.0 2.9E-70 6.2E-75 567.1 33.9 330 43-377 2-356 (365)
18 PRK14301 chaperone protein Dna 100.0 8.5E-70 1.9E-74 565.1 32.6 325 43-374 3-350 (373)
19 PRK14294 chaperone protein Dna 100.0 1.5E-69 3.2E-74 562.4 33.8 326 43-375 3-351 (366)
20 PRK14300 chaperone protein Dna 100.0 3.2E-69 7E-74 560.7 35.6 327 43-374 2-352 (372)
21 PRK14295 chaperone protein Dna 100.0 2.1E-69 4.6E-74 564.7 34.0 317 42-375 7-373 (389)
22 PRK10767 chaperone protein Dna 100.0 6.9E-69 1.5E-73 558.5 35.5 326 43-374 3-348 (371)
23 PRK14291 chaperone protein Dna 100.0 1.1E-68 2.3E-73 558.6 34.7 329 43-378 2-374 (382)
24 TIGR02349 DnaJ_bact chaperone 100.0 1E-68 2.2E-73 554.1 34.3 329 45-374 1-353 (354)
25 PRK14289 chaperone protein Dna 100.0 1.8E-68 4E-73 557.9 35.8 330 42-374 3-364 (386)
26 PRK14283 chaperone protein Dna 100.0 1.8E-68 3.9E-73 556.4 34.0 329 41-374 2-356 (378)
27 PRK14292 chaperone protein Dna 100.0 3.4E-68 7.3E-73 553.3 35.9 326 44-374 2-348 (371)
28 PRK14293 chaperone protein Dna 100.0 1.4E-67 3E-72 549.1 34.0 331 43-375 2-355 (374)
29 PRK14290 chaperone protein Dna 100.0 3E-67 6.5E-72 544.9 35.3 328 44-377 3-359 (365)
30 KOG0712 Molecular chaperone (D 100.0 7.6E-63 1.6E-67 496.8 24.9 313 42-371 2-336 (337)
31 PRK14299 chaperone protein Dna 100.0 7.5E-55 1.6E-59 439.4 29.1 275 43-375 3-287 (291)
32 PRK10266 curved DNA-binding pr 100.0 5E-54 1.1E-58 436.4 30.3 285 43-375 3-294 (306)
33 TIGR03835 termin_org_DnaJ term 100.0 6.8E-40 1.5E-44 353.6 25.8 143 210-356 669-813 (871)
34 KOG0713 Molecular chaperone (D 100.0 2.9E-41 6.2E-46 336.8 10.6 291 41-362 13-328 (336)
35 KOG0715 Molecular chaperone (D 100.0 1.6E-38 3.5E-43 319.3 14.5 234 45-299 44-288 (288)
36 KOG0714 Molecular chaperone (D 99.9 7.1E-22 1.5E-26 195.9 18.6 289 43-338 2-305 (306)
37 PF01556 CTDII: DnaJ C termina 99.8 2.6E-20 5.6E-25 153.6 8.2 80 288-367 1-81 (81)
38 PTZ00341 Ring-infected erythro 99.8 2.1E-19 4.5E-24 199.3 7.8 76 39-114 568-643 (1136)
39 KOG0716 Molecular chaperone (D 99.8 1.4E-19 3E-24 176.5 5.1 72 43-114 30-102 (279)
40 KOG0691 Molecular chaperone (D 99.8 4.5E-19 9.7E-24 177.9 5.3 90 42-139 3-93 (296)
41 KOG0718 Molecular chaperone (D 99.7 1.2E-18 2.6E-23 179.8 5.0 72 43-114 8-83 (546)
42 COG2214 CbpA DnaJ-class molecu 99.7 3.2E-17 7E-22 155.2 14.1 70 40-109 2-73 (237)
43 PF00226 DnaJ: DnaJ domain; I 99.7 1.5E-17 3.3E-22 130.4 4.4 62 45-106 1-64 (64)
44 KOG0717 Molecular chaperone (D 99.7 1.3E-17 2.8E-22 172.3 4.9 75 42-116 6-82 (508)
45 KOG0624 dsRNA-activated protei 99.7 4.6E-17 9.9E-22 163.5 7.1 77 40-117 390-470 (504)
46 KOG0719 Molecular chaperone (D 99.7 4.9E-17 1.1E-21 155.3 4.8 70 42-111 12-84 (264)
47 PHA03102 Small T antigen; Revi 99.6 1.6E-16 3.5E-21 145.5 6.6 85 43-139 4-90 (153)
48 smart00271 DnaJ DnaJ molecular 99.6 1E-15 2.2E-20 118.3 6.0 58 44-101 1-60 (60)
49 cd06257 DnaJ DnaJ domain or J- 99.6 3.5E-15 7.6E-20 113.1 6.0 54 45-98 1-55 (55)
50 KOG0721 Molecular chaperone (D 99.6 3E-15 6.5E-20 142.0 6.3 71 42-112 97-168 (230)
51 KOG0550 Molecular chaperone (D 99.5 9E-15 2E-19 150.0 6.0 92 39-136 368-461 (486)
52 KOG0722 Molecular chaperone (D 99.4 6.9E-14 1.5E-18 135.2 3.0 68 41-108 30-97 (329)
53 PRK05014 hscB co-chaperone Hsc 99.4 3.7E-13 8E-18 126.2 6.3 64 44-107 1-72 (171)
54 PRK01356 hscB co-chaperone Hsc 99.4 4.6E-13 1E-17 124.9 5.6 64 44-107 2-71 (166)
55 KOG0720 Molecular chaperone (D 99.3 5.6E-13 1.2E-17 138.3 4.6 65 43-107 234-298 (490)
56 PRK00294 hscB co-chaperone Hsc 99.3 1.3E-12 2.9E-17 122.5 6.6 66 42-107 2-75 (173)
57 PRK03578 hscB co-chaperone Hsc 99.3 3E-12 6.5E-17 120.5 6.5 65 43-107 5-77 (176)
58 PF00684 DnaJ_CXXCXGXG: DnaJ c 99.3 8.3E-12 1.8E-16 99.1 6.4 63 168-230 3-66 (66)
59 COG0484 DnaJ DnaJ-class molecu 99.2 9.8E-12 2.1E-16 128.2 7.0 117 179-368 141-267 (371)
60 PTZ00100 DnaJ chaperone protei 99.2 8.5E-12 1.8E-16 109.1 5.1 52 43-97 64-115 (116)
61 PRK14289 chaperone protein Dna 99.2 2.7E-11 5.9E-16 127.4 9.6 54 315-369 229-282 (386)
62 PRK14293 chaperone protein Dna 99.2 2.7E-11 5.9E-16 126.9 9.4 56 315-371 218-273 (374)
63 PRK09430 djlA Dna-J like membr 99.2 1.6E-11 3.5E-16 122.9 5.1 57 42-98 198-262 (267)
64 PRK14285 chaperone protein Dna 99.2 4.7E-11 1E-15 124.7 8.6 119 178-369 144-270 (365)
65 PHA02624 large T antigen; Prov 99.2 1.5E-11 3.3E-16 133.4 4.8 62 42-106 9-72 (647)
66 PRK14287 chaperone protein Dna 99.2 5.3E-11 1.2E-15 124.5 7.8 66 300-367 199-264 (371)
67 PRK14279 chaperone protein Dna 99.1 9.4E-11 2E-15 123.5 8.8 52 315-367 244-295 (392)
68 PRK14301 chaperone protein Dna 99.1 9.4E-11 2E-15 122.8 8.7 117 178-367 142-266 (373)
69 PRK14276 chaperone protein Dna 99.1 1.3E-10 2.7E-15 122.1 8.4 117 178-367 144-272 (380)
70 PRK14296 chaperone protein Dna 99.1 4.3E-10 9.3E-15 117.8 11.1 48 315-363 224-271 (372)
71 PRK14298 chaperone protein Dna 99.1 1.6E-10 3.5E-15 121.2 7.9 117 178-367 139-267 (377)
72 PRK14292 chaperone protein Dna 99.1 2.4E-10 5.1E-15 119.7 8.9 54 315-371 215-268 (371)
73 PRK14280 chaperone protein Dna 99.1 2.3E-10 4.9E-15 120.0 8.1 117 178-367 141-269 (376)
74 PRK14297 chaperone protein Dna 99.1 2.2E-10 4.7E-15 120.3 7.9 52 315-367 223-274 (380)
75 PRK14295 chaperone protein Dna 99.1 2.5E-10 5.5E-15 120.1 7.9 53 314-367 236-288 (389)
76 PRK14286 chaperone protein Dna 99.1 2.7E-10 5.8E-15 119.3 7.9 117 178-367 148-272 (372)
77 PRK14283 chaperone protein Dna 99.1 2.8E-10 6.1E-15 119.4 8.0 116 178-366 144-271 (378)
78 PRK14282 chaperone protein Dna 99.1 3.1E-10 6.6E-15 118.8 8.0 53 314-367 226-278 (369)
79 PRK14277 chaperone protein Dna 99.1 2.9E-10 6.4E-15 119.6 7.8 53 314-367 229-281 (386)
80 COG5407 SEC63 Preprotein trans 99.0 1E-10 2.2E-15 121.0 3.6 70 42-111 96-171 (610)
81 PRK14278 chaperone protein Dna 99.0 4.8E-10 1E-14 117.7 8.7 117 178-367 137-265 (378)
82 TIGR02349 DnaJ_bact chaperone 99.0 4.5E-10 9.7E-15 116.9 8.2 53 314-367 217-269 (354)
83 PRK14288 chaperone protein Dna 99.0 5.3E-10 1.2E-14 117.0 8.1 114 179-367 139-260 (369)
84 PRK14284 chaperone protein Dna 99.0 5.6E-10 1.2E-14 117.6 8.2 117 178-367 156-280 (391)
85 PRK14294 chaperone protein Dna 99.0 6.9E-10 1.5E-14 116.0 8.6 117 178-367 142-266 (366)
86 PRK14281 chaperone protein Dna 99.0 5.4E-10 1.2E-14 118.0 7.6 53 314-367 236-288 (397)
87 PRK10767 chaperone protein Dna 99.0 6.4E-10 1.4E-14 116.4 7.7 116 178-366 140-263 (371)
88 PRK14300 chaperone protein Dna 99.0 7.9E-10 1.7E-14 115.8 8.1 117 178-367 143-267 (372)
89 PRK14291 chaperone protein Dna 98.9 3.1E-09 6.7E-14 111.7 8.5 53 314-367 225-277 (382)
90 PRK14290 chaperone protein Dna 98.9 2.2E-09 4.8E-14 112.2 6.6 57 236-292 296-352 (365)
91 PTZ00037 DnaJ_C chaperone prot 98.9 3E-09 6.6E-14 112.9 7.6 51 315-367 226-276 (421)
92 PRK14299 chaperone protein Dna 98.9 2.1E-09 4.7E-14 109.0 5.9 78 282-367 125-203 (291)
93 TIGR00714 hscB Fe-S protein as 98.9 3E-09 6.4E-14 98.6 5.8 52 56-107 3-60 (157)
94 PRK01773 hscB co-chaperone Hsc 98.8 4E-09 8.6E-14 99.1 6.1 63 44-106 2-72 (173)
95 PRK10266 curved DNA-binding pr 98.7 3.2E-08 6.9E-13 101.2 6.5 82 284-366 115-210 (306)
96 KOG1150 Predicted molecular ch 98.5 7.2E-08 1.6E-12 90.9 4.0 64 43-106 52-117 (250)
97 COG5269 ZUO1 Ribosome-associat 98.5 6.6E-08 1.4E-12 94.8 3.8 66 43-108 42-113 (379)
98 KOG0568 Molecular chaperone (D 98.3 5.8E-07 1.3E-11 86.5 4.3 55 44-98 47-102 (342)
99 PLN03165 chaperone protein dna 98.2 2.5E-06 5.3E-11 74.4 6.1 57 165-233 43-99 (111)
100 KOG1789 Endocytosis protein RM 98.2 1.9E-06 4E-11 97.0 5.2 54 42-97 1279-1336(2235)
101 TIGR02642 phage_xxxx uncharact 98.1 2.9E-06 6.2E-11 80.5 4.1 49 206-255 99-149 (186)
102 TIGR03835 termin_org_DnaJ term 97.8 2.1E-05 4.5E-10 87.5 5.7 71 44-114 2-72 (871)
103 PF01556 CTDII: DnaJ C termina 97.4 0.00017 3.6E-09 59.4 4.5 46 235-280 26-72 (81)
104 KOG0723 Molecular chaperone (D 97.2 0.00052 1.1E-08 59.0 5.0 53 44-99 56-108 (112)
105 PF00684 DnaJ_CXXCXGXG: DnaJ c 97.0 0.00065 1.4E-08 53.8 3.1 42 183-233 1-54 (66)
106 KOG0712 Molecular chaperone (D 96.9 0.0018 4E-08 66.7 6.1 46 234-280 277-324 (337)
107 COG1107 Archaea-specific RecJ- 96.6 0.0011 2.5E-08 71.7 2.7 66 166-232 5-80 (715)
108 KOG3192 Mitochondrial J-type c 96.3 0.0032 6.8E-08 57.8 3.2 66 41-106 5-78 (168)
109 COG1076 DjlA DnaJ-domain-conta 95.6 0.0068 1.5E-07 57.1 2.2 53 44-96 113-173 (174)
110 COG1107 Archaea-specific RecJ- 95.2 0.014 3E-07 63.6 3.2 44 180-233 2-66 (715)
111 PLN03165 chaperone protein dna 95.0 0.024 5.3E-07 49.6 3.7 38 179-231 40-86 (111)
112 KOG0715 Molecular chaperone (D 94.8 0.029 6.2E-07 57.2 4.2 44 315-367 235-278 (288)
113 COG1076 DjlA DnaJ-domain-conta 94.6 0.019 4E-07 54.2 1.9 63 45-107 2-72 (174)
114 KOG2813 Predicted molecular ch 94.1 0.048 1E-06 55.5 3.8 23 206-231 234-256 (406)
115 TIGR02642 phage_xxxx uncharact 93.9 0.04 8.6E-07 52.6 2.5 31 180-220 99-129 (186)
116 KOG2813 Predicted molecular ch 93.0 0.057 1.2E-06 54.9 2.3 26 207-235 246-271 (406)
117 KOG0431 Auxilin-like protein a 91.7 0.19 4.2E-06 54.3 4.4 25 56-80 400-424 (453)
118 PF03656 Pam16: Pam16; InterP 82.7 2.5 5.4E-05 38.0 5.1 53 45-100 59-111 (127)
119 KOG0724 Zuotin and related mol 82.4 1.2 2.6E-05 46.0 3.5 52 56-107 4-60 (335)
120 PF11833 DUF3353: Protein of u 81.6 2.4 5.2E-05 40.8 4.9 38 53-97 1-38 (194)
121 KOG2824 Glutaredoxin-related p 77.8 2.4 5.2E-05 42.8 3.7 25 208-232 242-274 (281)
122 cd03031 GRX_GRX_like Glutaredo 76.8 3.1 6.8E-05 38.3 3.9 37 181-232 100-145 (147)
123 PF13446 RPT: A repeated domai 71.4 7.1 0.00015 30.1 4.2 44 45-98 6-49 (62)
124 TIGR00310 ZPR1_znf ZPR1 zinc f 71.0 17 0.00037 35.0 7.5 76 182-257 2-101 (192)
125 TIGR00630 uvra excinuclease AB 65.3 4.3 9.4E-05 47.9 2.6 26 209-234 739-773 (924)
126 smart00709 Zpr1 Duplicated dom 63.9 26 0.00057 32.7 7.1 75 182-256 2-100 (160)
127 smart00709 Zpr1 Duplicated dom 62.2 36 0.00077 31.8 7.6 26 304-333 75-100 (160)
128 COG5552 Uncharacterized conser 61.4 23 0.00049 28.9 5.2 45 43-87 2-46 (88)
129 TIGR00630 uvra excinuclease AB 59.3 5.4 0.00012 47.1 2.0 34 182-218 738-771 (924)
130 PRK00349 uvrA excinuclease ABC 58.3 6.7 0.00014 46.4 2.5 33 208-242 740-781 (943)
131 PRK00349 uvrA excinuclease ABC 55.5 9.2 0.0002 45.3 3.0 12 223-234 741-752 (943)
132 COG0178 UvrA Excinuclease ATPa 52.3 12 0.00026 43.4 3.2 26 347-375 845-872 (935)
133 TIGR00340 zpr1_rel ZPR1-relate 50.5 37 0.00081 31.8 5.7 34 183-216 1-38 (163)
134 PF07092 DUF1356: Protein of u 50.3 11 0.00023 37.6 2.1 18 179-196 37-54 (238)
135 TIGR00340 zpr1_rel ZPR1-relate 50.0 59 0.0013 30.5 6.9 26 304-333 72-98 (163)
136 PRK00635 excinuclease ABC subu 48.8 11 0.00024 47.5 2.4 24 346-372 1721-1745(1809)
137 PRK12336 translation initiatio 48.8 68 0.0015 31.0 7.4 14 180-193 98-111 (201)
138 PF07709 SRR: Seven Residue Re 45.9 11 0.00025 20.7 0.9 13 85-97 2-14 (14)
139 KOG2824 Glutaredoxin-related p 45.3 26 0.00055 35.6 3.9 49 169-227 232-280 (281)
140 PF11181 YflT: Heat induced st 44.5 7.3 0.00016 33.3 -0.0 27 410-436 54-82 (103)
141 PF10041 DUF2277: Uncharacteri 43.5 84 0.0018 25.8 5.8 46 43-88 2-47 (78)
142 TIGR03655 anti_R_Lar restricti 40.5 43 0.00094 25.1 3.7 14 181-194 2-15 (53)
143 COG1326 Uncharacterized archae 40.4 1.7E+02 0.0037 28.3 8.4 76 235-320 62-141 (201)
144 PF03589 Antiterm: Antitermina 35.9 12 0.00026 32.0 -0.1 14 181-194 6-19 (95)
145 PRK00635 excinuclease ABC subu 35.7 19 0.00041 45.5 1.6 28 208-235 1609-1645(1809)
146 COG0178 UvrA Excinuclease ATPa 34.0 35 0.00075 39.8 3.2 31 208-240 732-771 (935)
147 PF14687 DUF4460: Domain of un 33.9 72 0.0016 28.0 4.5 45 54-98 4-53 (112)
148 PF09862 DUF2089: Protein of u 32.7 33 0.00071 30.3 2.2 20 209-228 1-20 (113)
149 PF12434 Malate_DH: Malate deh 30.6 51 0.0011 21.7 2.2 17 58-74 10-26 (28)
150 KOG1673 Ras GTPases [General f 30.1 31 0.00068 32.4 1.7 56 16-75 65-124 (205)
151 PF04246 RseC_MucC: Positive r 29.8 61 0.0013 28.9 3.5 24 234-257 40-63 (135)
152 TIGR00310 ZPR1_znf ZPR1 zinc f 29.3 3.2E+02 0.0068 26.3 8.5 26 304-333 74-100 (192)
153 cd02639 R3H_RRM R3H domain of 28.3 71 0.0015 24.9 3.1 28 351-378 17-44 (60)
154 PF05017 TMP: TMP repeat; Int 27.8 26 0.00057 18.1 0.5 10 415-424 1-10 (11)
155 COG2214 CbpA DnaJ-class molecu 25.5 1.6E+02 0.0036 26.9 5.8 73 288-363 150-223 (237)
156 KOG3415 Putative Rab5-interact 25.5 50 0.0011 29.2 2.0 21 447-469 105-125 (129)
157 COG1241 MCM2 Predicted ATPase 25.4 1.1E+03 0.024 27.3 13.7 15 359-373 258-272 (682)
158 PF07295 DUF1451: Protein of u 24.3 51 0.0011 30.4 2.0 16 173-188 105-120 (146)
159 COG3128 PiuC Uncharacterized i 24.0 3.5E+02 0.0075 26.3 7.4 85 284-373 113-197 (229)
160 PF13677 MotB_plug: Membrane M 23.3 63 0.0014 24.8 2.0 21 451-471 24-44 (58)
161 smart00276 GLECT Galectin. Gal 23.0 1.1E+02 0.0024 26.9 3.9 42 317-358 3-49 (128)
162 PF03367 zf-ZPR1: ZPR1 zinc-fi 22.9 2.3E+02 0.0051 26.4 6.1 34 181-214 2-38 (161)
163 KOG0315 G-protein beta subunit 22.7 99 0.0021 31.3 3.7 43 291-333 18-67 (311)
164 PRK12380 hydrogenase nickel in 22.3 1.6E+02 0.0034 25.8 4.6 24 207-230 71-96 (113)
165 PF07092 DUF1356: Protein of u 22.2 39 0.00086 33.6 0.9 11 208-218 40-50 (238)
166 PF10080 DUF2318: Predicted me 21.7 1.5E+02 0.0033 25.6 4.3 22 206-227 35-59 (102)
167 KOG0714 Molecular chaperone (D 21.4 15 0.00033 35.9 -2.2 58 42-111 96-153 (306)
168 COG3071 HemY Uncharacterized e 21.1 51 0.0011 35.1 1.5 33 450-482 47-83 (400)
169 cd06007 R3H_DEXH_helicase R3H 21.0 1.2E+02 0.0025 23.6 3.1 28 351-378 16-43 (59)
170 KOG2724 Nuclear pore complex c 20.7 1E+02 0.0022 33.2 3.5 84 269-353 370-455 (487)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-88 Score=686.86 Aligned_cols=320 Identities=43% Similarity=0.716 Sum_probs=285.7
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL 120 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~ 120 (485)
+.+|||+||||+++||++|||+|||+||+|||||+|+ +++|+++|++|++||||||||+||++||+||++++++++.++
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg 81 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGG 81 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCC
Confidence 5789999999999999999999999999999999999 889999999999999999999999999999999987333222
Q ss_pred -CCCCCCCCchhhhhhhcCCCCCCCCCCCCCCCcccccCCCCCccc----------------------------ccccCC
Q 011450 121 -SNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGL----------------------------DIRCGG 171 (485)
Q Consensus 121 -~~~~~~~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~~~~~~~~~~----------------------------di~C~G 171 (485)
+.++.+.++.|+|++|||+.. ++. . ..+.+.++. |..|+|
T Consensus 82 ~g~~~fgg~~~DIF~~~FgGg~--~~~-~--------~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~G 150 (371)
T COG0484 82 FGFGGFGGDFGDIFEDFFGGGG--GGR-R--------RPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHG 150 (371)
T ss_pred CCcCCCCCCHHHHHHHhhcCCC--ccc-C--------CCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCC
Confidence 112122268899999996321 111 0 001122222 233999
Q ss_pred CCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCE
Q 011450 172 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT 251 (485)
Q Consensus 172 tG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~ 251 (485)
+|++.++.+.+|++|+|+|++...+++ |.+++.++|+.|+|+|++|.++|.+|+|.|++++.++|+|+||||+.+|++
T Consensus 151 sGak~gt~~~tC~tC~G~G~v~~~~~~--g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ 228 (371)
T COG0484 151 SGAKPGTDPKTCPTCNGSGQVRTVQRT--GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDR 228 (371)
T ss_pred CCCCCCCCCCcCCCCCCcCeEEEEEee--eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCE
Confidence 999999999999999999999888777 888889999999999999999999999999999999999999999999999
Q ss_pred EEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEE
Q 011450 252 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKL 331 (485)
Q Consensus 252 Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl 331 (485)
|++.|+|+++.+++++|||||.|.|++|+.|+|+|+|||++++|++.+|+||++++||||+|.++|+||+|+|+|++++|
T Consensus 229 ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~~~rl 308 (371)
T COG0484 229 IRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEVFRL 308 (371)
T ss_pred EEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 332 QQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 332 ~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
+|+|||..++ ..+|||||+|+|++|++|+.+|++||++|++..
T Consensus 309 ~gkG~p~~~~-~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~~ 351 (371)
T COG0484 309 RGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL 351 (371)
T ss_pred cCCCccccCC-CCcCCEEEEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence 9999998765 567999999999999999999999999999876
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.8e-75 Score=604.74 Aligned_cols=331 Identities=30% Similarity=0.560 Sum_probs=275.8
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccC-CCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD-GLS 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~-~~~ 121 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+|||||+||+.||+||++++.++.+ +++
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~~ 82 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCcC
Confidence 5799999999999999999999999999999999998889999999999999999999999999999987753211 000
Q ss_pred CCC----------CCC-CchhhhhhhcCCCCCCCCCCCCCCCccc--------cc-CCCC-------CcccccccCCCCC
Q 011450 122 NTS----------QGV-DPFELYSAFFGGSDGLFGGVGEAGGINF--------NF-GNKG-------NFGLDIRCGGTGA 174 (485)
Q Consensus 122 ~~~----------~~~-dp~d~f~~fFgg~~g~fg~~g~~~g~~~--------~~-~~~~-------~~~~di~C~GtG~ 174 (485)
.+. .++ ++.|+|+.|||+.. . ....+..+.+. .. .... ....|..|+|+|+
T Consensus 83 ~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~-~-~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~ 160 (372)
T PRK14296 83 FGDFEDLFSNMGSSGFSSFTNIFSDFFGSNK-S-DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGA 160 (372)
T ss_pred CCccccccccccccccccchhhhhhhcCCCc-c-CCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCcc
Confidence 000 011 23367778875310 0 00000000000 00 0000 0112333999999
Q ss_pred CCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEE
Q 011450 175 KSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 254 (485)
Q Consensus 175 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~ 254 (485)
+.+..+.+|+.|+|+|.++..++.++.+++..++|+.|+|+|+++...|+.|+|.|++.+.++++|.||||+++|++|+|
T Consensus 161 ~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 240 (372)
T PRK14296 161 ESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKL 240 (372)
T ss_pred CCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEE
Confidence 99888999999999999988877766556667899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccEEEEEEeecccccccc-ccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcC
Q 011450 255 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRD-GLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQ 333 (485)
Q Consensus 255 ~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~-G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g 333 (485)
+|+|+++..++.+|||+|+|+++||+.|+|+ |+||+++++|||.|||+|+++.|+||||+++|+||+++++|++++|+|
T Consensus 241 ~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~~g~~~ri~G 320 (372)
T PRK14296 241 SQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSNELIIINN 320 (372)
T ss_pred eccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccCCCcEEEEcC
Confidence 9999998778889999999999999999995 899999999999999999999999999998999999999999999999
Q ss_pred CCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 334 MGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 334 ~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
+|||...+++.+|||||+|+|+||+.|+++|+++|++|++..
T Consensus 321 kGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~~ 362 (372)
T PRK14296 321 KGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQT 362 (372)
T ss_pred CCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 999965555578999999999999999999999999998753
No 3
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.9e-74 Score=595.80 Aligned_cols=333 Identities=38% Similarity=0.683 Sum_probs=281.3
Q ss_pred ccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC
Q 011450 41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL 120 (485)
Q Consensus 41 ~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~ 120 (485)
...+|||+||||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+||+||+||+.||+||++++++++++.
T Consensus 2 ~~~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~ 81 (377)
T PRK14298 2 ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAE 81 (377)
T ss_pred CCCCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcc
Confidence 34589999999999999999999999999999999998888999999999999999999999999999998876432211
Q ss_pred C-CCCCC-CCchhhhhhhcCCCCCCCCCCCCCCCccccc---------CCC-------CCcccccccCCCCCCCCCCccc
Q 011450 121 S-NTSQG-VDPFELYSAFFGGSDGLFGGVGEAGGINFNF---------GNK-------GNFGLDIRCGGTGAKSSNCIQS 182 (485)
Q Consensus 121 ~-~~~~~-~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~~---------~~~-------~~~~~di~C~GtG~~~~~~~~~ 182 (485)
+ .+..+ .++.|+|++|||+. +.....++..+.+... ... .....|..|+|+|++.+..+.+
T Consensus 82 ~~~~~~~~~~~~d~f~~~Fgg~-~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~ 160 (377)
T PRK14298 82 DIFRGADFGGFGDIFEMFFGGG-GRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKR 160 (377)
T ss_pred cccccCCcCcchhhhHhhhcCC-CccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCc
Confidence 0 00111 13457899999642 1100000000000000 000 0011233399999999988999
Q ss_pred CCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCC
Q 011450 183 CKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDR 262 (485)
Q Consensus 183 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~ 262 (485)
|+.|+|+|.++..++.++|+++..++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+++|++|+|+|+|+++.
T Consensus 161 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~ 240 (377)
T PRK14298 161 CPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGS 240 (377)
T ss_pred CCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCC
Confidence 99999999999888888888888899999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCC
Q 011450 263 RRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNP 342 (485)
Q Consensus 263 ~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~ 342 (485)
.++.+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+|+||++.|+||+|+++|++++|+|+|||..+.
T Consensus 241 ~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~lri~g~G~p~~~~- 319 (377)
T PRK14298 241 PGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLKDKGMPRLHG- 319 (377)
T ss_pred CCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCEEEECCCCCCCCCC-
Confidence 7889999999999999999999999999999999999999999999999999899999999999999999999997654
Q ss_pred CCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 343 SVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 343 ~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
..+|||||+|+|++|+.|+++++++|++|+++.
T Consensus 320 ~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~~~ 352 (377)
T PRK14298 320 HGKGDQLVKVIVKTPTKLTQEQKELLREFDELS 352 (377)
T ss_pred CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 468999999999999999999999999998754
No 4
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.8e-74 Score=594.56 Aligned_cols=329 Identities=34% Similarity=0.674 Sum_probs=280.0
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN 122 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~~ 122 (485)
.+|||++|||+++||.+|||+|||+||++||||+|++++|+++|++|++||++|+||+||+.||+||++++.++.++++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA 82 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCCC
Confidence 47999999999999999999999999999999999888899999999999999999999999999999887643211111
Q ss_pred CCCCC-CchhhhhhhcCCCCCCCCC-CCCCCCcccc---------cCCC-------CCcccccccCCCCCCCCCCcccCC
Q 011450 123 TSQGV-DPFELYSAFFGGSDGLFGG-VGEAGGINFN---------FGNK-------GNFGLDIRCGGTGAKSSNCIQSCK 184 (485)
Q Consensus 123 ~~~~~-dp~d~f~~fFgg~~g~fg~-~g~~~g~~~~---------~~~~-------~~~~~di~C~GtG~~~~~~~~~C~ 184 (485)
.++ ++.|+|+.|||+.+ +... ..+..+.+.. .... .....|-.|+|+|++....+.+|+
T Consensus 83 --~~f~~~~d~f~~~fgg~~-~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~ 159 (371)
T PRK14287 83 --GDFGGFSDIFDMFFGGGG-GRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCS 159 (371)
T ss_pred --ccccchHHHHHhhhcccc-CCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccC
Confidence 111 34588999997421 1000 0000000000 0000 001122339999999888889999
Q ss_pred CCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCCCC
Q 011450 185 ACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRR 264 (485)
Q Consensus 185 ~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g 264 (485)
.|+|+|.++..+++++|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+.+|++|+|+|+|+++..+
T Consensus 160 ~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~ 239 (371)
T PRK14287 160 HCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNG 239 (371)
T ss_pred CCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCC
Confidence 99999999988899999999889999999999999999999999999999999999999999999999999999998777
Q ss_pred CCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCCCC
Q 011450 265 SLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSV 344 (485)
Q Consensus 265 ~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~ 344 (485)
+.+|||||+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||+++|+||+|+++|++++|+|+|||..++ +.
T Consensus 240 ~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g~G~p~~~~-~~ 318 (371)
T PRK14287 240 GPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGKGVPNVHG-RG 318 (371)
T ss_pred CCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCcEEEEcCCCccCCCC-CC
Confidence 78999999999999999999999999999999999999999999999999899999999999999999999997654 46
Q ss_pred CccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 345 RGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 345 rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
+|||||+|+|.+|+.|+.+|+++|++|+++.
T Consensus 319 ~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~ 349 (371)
T PRK14287 319 QGDQHVQVRVVTPKNLTEKEKELMREFAGMS 349 (371)
T ss_pred CCCEEEEEEEEcCCCCCHHHHHHHHHHHhhh
Confidence 8999999999999999999999999998653
No 5
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.2e-73 Score=592.27 Aligned_cols=331 Identities=34% Similarity=0.672 Sum_probs=280.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCC--C
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG--L 120 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~--~ 120 (485)
.+|||+||||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+||+||+||++||+||+++++++.++ +
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence 57999999999999999999999999999999999988899999999999999999999999999999987643211 0
Q ss_pred CCCC----CC-CCchhhhhhhcCCCCCCCCCCCCCCCccccc---------CCC-------CCcccccccCCCCCCCCCC
Q 011450 121 SNTS----QG-VDPFELYSAFFGGSDGLFGGVGEAGGINFNF---------GNK-------GNFGLDIRCGGTGAKSSNC 179 (485)
Q Consensus 121 ~~~~----~~-~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~~---------~~~-------~~~~~di~C~GtG~~~~~~ 179 (485)
+.++ .+ .++.|+|+.|||+.++......+..+.+... ... .....|-.|+|+|++.+..
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~ 162 (380)
T PRK14276 83 GFGGFDGSGGFGGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTS 162 (380)
T ss_pred CCCCccccccccchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCC
Confidence 1000 01 2445889999964211000000000000000 000 0011223399999998888
Q ss_pred cccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccC
Q 011450 180 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGN 259 (485)
Q Consensus 180 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd 259 (485)
+.+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||+|+.+|++|+|+|+|+
T Consensus 163 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~ 242 (380)
T PRK14276 163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGE 242 (380)
T ss_pred CccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEecccc
Confidence 89999999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCC
Q 011450 260 FDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDI 339 (485)
Q Consensus 260 ~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~ 339 (485)
+...++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||+++|+||+|+++|++++|+|+|||..
T Consensus 243 ~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~~~~i~g~G~p~~ 322 (380)
T PRK14276 243 AGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFRLRGKGAPKL 322 (380)
T ss_pred CCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCCEEEECCCCcCCC
Confidence 98777788999999999999999999999999999999999999999999999998999999999999999999999986
Q ss_pred CCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 340 NNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 340 ~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
+. ..+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus 323 ~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~~ 356 (380)
T PRK14276 323 RG-GGNGDQHVTVNIVTPTKLNDAQKEALKAFAKA 356 (380)
T ss_pred CC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 54 46899999999999999999999999999864
No 6
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.8e-73 Score=589.21 Aligned_cols=331 Identities=36% Similarity=0.608 Sum_probs=276.6
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN 122 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~~ 122 (485)
.+|||+||||+++||.+|||+|||+||++||||+|++++|+++|++|++||+||+||++|+.||+||++...++..+++.
T Consensus 2 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~ 81 (378)
T PRK14278 2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGF 81 (378)
T ss_pred CCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCC
Confidence 47999999999999999999999999999999999988899999999999999999999999999998743221110110
Q ss_pred CCCCC-CchhhhhhhcCCCCCCCCCC-CCCCCcccc--------c-CCCC-------CcccccccCCCCCCCCCCcccCC
Q 011450 123 TSQGV-DPFELYSAFFGGSDGLFGGV-GEAGGINFN--------F-GNKG-------NFGLDIRCGGTGAKSSNCIQSCK 184 (485)
Q Consensus 123 ~~~~~-dp~d~f~~fFgg~~g~fg~~-g~~~g~~~~--------~-~~~~-------~~~~di~C~GtG~~~~~~~~~C~ 184 (485)
+ .++ ++.|+|++|||+.++..+.. .+..+.+.. . .... ....+..|+|+|++.+..+.+|+
T Consensus 82 ~-~~f~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~ 160 (378)
T PRK14278 82 G-GGFGGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCD 160 (378)
T ss_pred C-cCcCchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecC
Confidence 1 111 34588999997421000000 000000000 0 0000 01122239999999988899999
Q ss_pred CCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCCCC
Q 011450 185 ACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRR 264 (485)
Q Consensus 185 ~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g 264 (485)
.|+|+|.++..+++.+|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+.+|++|+|+|+|++++.+
T Consensus 161 ~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~ 240 (378)
T PRK14278 161 TCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGG 240 (378)
T ss_pred CccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCC
Confidence 99999999888888889998889999999999999999999999999999999999999999999999999999998877
Q ss_pred CCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEcc-CCeEEEEeCCCCCCCCEEEEcCCCCCCCCCCC
Q 011450 265 SLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETV-EGMKDLRIPSGVQPGDTVKLQQMGVPDINNPS 343 (485)
Q Consensus 265 ~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tl-dG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~ 343 (485)
+.+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+ ++.+.|+||+++++|++++|+|+|||..+. .
T Consensus 241 ~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~-~ 319 (378)
T PRK14278 241 GPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRS-G 319 (378)
T ss_pred CCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCCC-C
Confidence 88999999999999999999999999999999999999999999999 556899999999999999999999997653 4
Q ss_pred CCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 344 VRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 344 ~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
.+|||||+|+|.||+.|+++|+++|++|+.+.
T Consensus 320 ~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~~~ 351 (378)
T PRK14278 320 GRGDLHAHVEVVVPTRLDHEDIELLRELKALR 351 (378)
T ss_pred CCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Confidence 68999999999999999999999999998653
No 7
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.8e-73 Score=587.86 Aligned_cols=332 Identities=38% Similarity=0.703 Sum_probs=280.7
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC-
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS- 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~- 121 (485)
.+|||+||||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+|||||.+|++||+||+++++++.++++
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~ 82 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF 82 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence 4799999999999999999999999999999999998889999999999999999999999999999988764321111
Q ss_pred C--C-CCCCCchhhhhhhcCCCCCCCCCCCCCCCccccc---------CCCC-------CcccccccCCCCCCCCCCccc
Q 011450 122 N--T-SQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNF---------GNKG-------NFGLDIRCGGTGAKSSNCIQS 182 (485)
Q Consensus 122 ~--~-~~~~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~~---------~~~~-------~~~~di~C~GtG~~~~~~~~~ 182 (485)
+ + ..++++.|+|+.|||+.++......+..+.+... .... ....|..|+|+|+..+..+.+
T Consensus 83 ~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~ 162 (376)
T PRK14280 83 GGGDFGGGFGFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKET 162 (376)
T ss_pred CCCCccccccchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCcc
Confidence 0 0 0123456889999964210000000000000000 0000 011222399999998888899
Q ss_pred CCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCC
Q 011450 183 CKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDR 262 (485)
Q Consensus 183 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~ 262 (485)
|+.|+|+|.++..+++++|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||+|+.+|++|+|+|+|++..
T Consensus 163 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~ 242 (376)
T PRK14280 163 CSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGV 242 (376)
T ss_pred CCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCC
Confidence 99999999998888889999988899999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCC
Q 011450 263 RRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNP 342 (485)
Q Consensus 263 ~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~ 342 (485)
.++.+|||||+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||++.|+||+++++|++++|+|+|||...+
T Consensus 243 ~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~~~~i~g~G~p~~~~- 321 (376)
T PRK14280 243 NGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFRLKGKGVPNVRG- 321 (376)
T ss_pred CCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCcEEEEcCCCCCCCCC-
Confidence 7788999999999999999999999999999999999999999999999999899999999999999999999997654
Q ss_pred CCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 343 SVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 343 ~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
..+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus 322 ~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~~~ 354 (376)
T PRK14280 322 YGQGDQYVVVRVVTPTKLTDRQKELLREFAELS 354 (376)
T ss_pred CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 468999999999999999999999999998653
No 8
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.9e-73 Score=586.31 Aligned_cols=320 Identities=33% Similarity=0.590 Sum_probs=263.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~ 121 (485)
.+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||+||++||+||++++.++.++ +
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~-~ 80 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS-Q 80 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCC-c
Confidence 589999999999999999999999999999999998 57799999999999999999999999999999877632111 0
Q ss_pred CCCCCCCchh----hhhhhcCCCCCCCCCC--CCCCCcccccC---------CCC-------CcccccccCCCCCCCCCC
Q 011450 122 NTSQGVDPFE----LYSAFFGGSDGLFGGV--GEAGGINFNFG---------NKG-------NFGLDIRCGGTGAKSSNC 179 (485)
Q Consensus 122 ~~~~~~dp~d----~f~~fFgg~~g~fg~~--g~~~g~~~~~~---------~~~-------~~~~di~C~GtG~~~~~~ 179 (485)
... .++|+ +|+.|||+. +.+.. .+..+.+.... ... ....+-.|+|+|++.. .
T Consensus 81 -~~~-~~~f~~~~~~F~~~fg~g--~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~-~ 155 (369)
T PRK14288 81 -SDF-SDFFEDLGSFFEDAFGFG--ARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDK-A 155 (369)
T ss_pred -ccc-ccchhhHHHHHHhhcCCC--CcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCC-C
Confidence 111 13333 444444321 00000 00000000000 000 0012223999999875 6
Q ss_pred cccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccC
Q 011450 180 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGN 259 (485)
Q Consensus 180 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd 259 (485)
+.+|+.|+|+|.+...+ |++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+.+|++|+|+|+|+
T Consensus 156 ~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~ 231 (369)
T PRK14288 156 LETCKQCNGQGQVFMRQ----GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGN 231 (369)
T ss_pred CcCCCCCCCCcEEEEEe----ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCcc
Confidence 78999999999876543 66777789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCe-EEEEeCCCCCCCCEEEEcCCCCCC
Q 011450 260 FDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPD 338 (485)
Q Consensus 260 ~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~-~~l~Ip~g~q~G~~irl~g~G~P~ 338 (485)
+.. ++.+|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ ++|+||+++++|++++|+|+|||.
T Consensus 232 ~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~ 310 (369)
T PRK14288 232 EYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKH 310 (369)
T ss_pred CCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCC
Confidence 865 578999999999999999999999999999999999999999999999997 799999999999999999999997
Q ss_pred CCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 339 INNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 339 ~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
.+. ..+|||||+|+|.+|+.|+++|+++|++|+..
T Consensus 311 ~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~ 345 (369)
T PRK14288 311 PES-SYRGSLIVELQVIYPKSLNKEQQELLEKLHAS 345 (369)
T ss_pred CCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 653 46899999999999999999999999999875
No 9
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-72 Score=588.57 Aligned_cols=324 Identities=37% Similarity=0.694 Sum_probs=278.1
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccC-C
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD-G 119 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~-~ 119 (485)
+.+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||.+|+.||+||+++++.+.. +
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~ 82 (386)
T PRK14277 3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ 82 (386)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence 4589999999999999999999999999999999998 4678999999999999999999999999999988763211 0
Q ss_pred C----CC---CCCC---CCchhhhhhhcCCCCCCCCCCCCCCCcccccCCCCCccc------------------------
Q 011450 120 L----SN---TSQG---VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGL------------------------ 165 (485)
Q Consensus 120 ~----~~---~~~~---~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~~~~~~~~~~------------------------ 165 (485)
+ ++ ++.+ .++.|+|++||+++ ||+.+... ...+.++.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~---fgg~~~~~------~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~ 153 (386)
T PRK14277 83 GGFGQGGFGGGGFDFDFGGFGDIFEDIFGDF---FGTGRRRA------ETGPQKGADIRYDLELTFEEAAFGTEKEIEVE 153 (386)
T ss_pred CCcCCCCccccCccccccchhHHHHHhhccc---ccCCCcCC------CCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEE
Confidence 0 00 0001 12346788888642 22100000 00011122
Q ss_pred ----ccccCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEE
Q 011450 166 ----DIRCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVV 241 (485)
Q Consensus 166 ----di~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~ 241 (485)
|..|+|+|......+.+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.
T Consensus 154 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~ 233 (386)
T PRK14277 154 RFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVN 233 (386)
T ss_pred eeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEe
Confidence 2229999999888899999999999999888999999998899999999999999999999999999999999999
Q ss_pred cCCCCCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCC
Q 011450 242 IPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPS 321 (485)
Q Consensus 242 IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~ 321 (485)
||+|+++|++|+|+|+|++...++.+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+++|+||+
T Consensus 234 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~ 313 (386)
T PRK14277 234 IPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPE 313 (386)
T ss_pred cCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECC
Confidence 99999999999999999987777789999999999999999999999999999999999999999999999998999999
Q ss_pred CCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 322 GVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 322 g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
++++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+++.
T Consensus 314 g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~~~ 366 (386)
T PRK14277 314 GTQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKLTEKQKELLREFEKLS 366 (386)
T ss_pred CCCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999997654 368999999999999999999999999998653
No 10
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=8.3e-73 Score=593.70 Aligned_cols=340 Identities=30% Similarity=0.557 Sum_probs=275.9
Q ss_pred cccccCCCCCcccccccccccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccc
Q 011450 22 FKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEK 101 (485)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~k 101 (485)
|.|+-+.+-+..|....-.+..+|||++|||+++||.+|||+|||+||++||||+|++ .++|++|++||+|||||+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~k 82 (421)
T PTZ00037 6 FPFDGMPGGGFDGGRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEK 82 (421)
T ss_pred CCcccccCCCCCCCcccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHH
Confidence 4566555434332222222336899999999999999999999999999999999953 5899999999999999999
Q ss_pred cchhccccccCcCcccCCCCCCCCCCCchhhhhhhcCCCCCCCCCCCCCCCcccc---------cCCCC-------Cccc
Q 011450 102 RSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFN---------FGNKG-------NFGL 165 (485)
Q Consensus 102 R~~YD~~G~~~~~~~~~~~~~~~~~~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~---------~~~~~-------~~~~ 165 (485)
|+.||+||++++.++++ +.++.++|+.|||+... .. +...+.+.. ..... ....
T Consensus 83 R~~YD~~G~~~~~~~~~-------~~d~~d~f~~~Fggg~~--~~-~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~ 152 (421)
T PTZ00037 83 RKIYDEYGEEGLEGGEQ-------PADASDLFDLIFGGGRK--PG-GKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVI 152 (421)
T ss_pred HHHHhhhcchhcccCCC-------CcchhhhHHHhhccccc--cc-cccCCCCEEEEeeeeHHHHhCCCceEEEeecccc
Confidence 99999999987753211 23567899999974210 00 000010000 00000 1122
Q ss_pred ccccCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe--ecccccCCCceeeeceEEEEEcC
Q 011450 166 DIRCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--DHCRRCGGNGEVQSKRSMKVVIP 243 (485)
Q Consensus 166 di~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--~~C~~C~G~G~v~~~k~l~V~IP 243 (485)
|-.|+|+|++.. .+.+|+.|+|+|.++...++.+..+++.++|+.|+|+|+++. ..|..|+|.|++.+.++++|.||
T Consensus 153 C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip 231 (421)
T PTZ00037 153 CANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNID 231 (421)
T ss_pred ccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeC
Confidence 334999998654 678999999999977766655423345679999999999986 67999999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCe-EEEEeCCC
Q 011450 244 PGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSG 322 (485)
Q Consensus 244 ~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~-~~l~Ip~g 322 (485)
||+.+|++|+|+|+|++.+ ++.||||||+|+++||+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|+||+|
T Consensus 232 ~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g 310 (421)
T PTZ00037 232 KGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPG 310 (421)
T ss_pred CCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCC
Confidence 9999999999999999865 578999999999999999999999999999999999999999999999997 78999998
Q ss_pred --CCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcC--CCCChhHHHHHHHHHhhcC
Q 011450 323 --VQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIP--KDISDPERALVEEIAFLKS 376 (485)
Q Consensus 323 --~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P--~~ls~~q~~ll~~l~~~~~ 376 (485)
++||++++|+|+|||..++++.+|||||+|+|.|| +.|+++|+++|++|+....
T Consensus 311 ~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~~~ 368 (421)
T PTZ00037 311 EVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQNP 368 (421)
T ss_pred cccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccCCC
Confidence 99999999999999987655578999999999999 9999999999999986533
No 11
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.1e-72 Score=583.20 Aligned_cols=328 Identities=36% Similarity=0.695 Sum_probs=273.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~ 121 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||++|+.||+||+++++.+.++.+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 479999999999999999999999999999999997 4678999999999999999999999999999988764321111
Q ss_pred CCC-CC-----CCchhhhhhhcCCCCCCCCCCC----CCCCccccc---------CCC-------CCcccccccCCCCCC
Q 011450 122 NTS-QG-----VDPFELYSAFFGGSDGLFGGVG----EAGGINFNF---------GNK-------GNFGLDIRCGGTGAK 175 (485)
Q Consensus 122 ~~~-~~-----~dp~d~f~~fFgg~~g~fg~~g----~~~g~~~~~---------~~~-------~~~~~di~C~GtG~~ 175 (485)
.++ .+ .++.|+|+.|||+.+++....+ +..+.+... ... .....|-.|+|+|++
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~ 162 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGAS 162 (372)
T ss_pred CCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcC
Confidence 000 01 1445889999974211100000 000000000 000 001122239999999
Q ss_pred CCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEc
Q 011450 176 SSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 255 (485)
Q Consensus 176 ~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~ 255 (485)
....+.+|+.|+|+|.++..+ |++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+.+|++|+|+
T Consensus 163 ~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~ 238 (372)
T PRK14286 163 KGSSPTTCPDCGGSGQIRRTQ----GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVS 238 (372)
T ss_pred CCCCCccCCCCcCeEEEEEEe----ceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEEC
Confidence 888889999999999876542 7777788999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCe-EEEEeCCCCCCCCEEEEcCC
Q 011450 256 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQM 334 (485)
Q Consensus 256 G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~-~~l~Ip~g~q~G~~irl~g~ 334 (485)
|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+||+ ++|+||+++++|++++|+|+
T Consensus 239 g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~ 318 (372)
T PRK14286 239 GEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGH 318 (372)
T ss_pred CccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCC
Confidence 99999877778899999999999999999999999999999999999999999999997 79999999999999999999
Q ss_pred CCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 335 GVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 335 G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
|||..+. ..+|||||+|+|.||+.|+++|+++|++|++..
T Consensus 319 G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~~ 358 (372)
T PRK14286 319 GMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFARES 358 (372)
T ss_pred CCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 9997654 468999999999999999999999999999865
No 12
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-71 Score=580.84 Aligned_cols=332 Identities=35% Similarity=0.649 Sum_probs=279.1
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC-
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL- 120 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~- 120 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||++|++||+||+++++++++.+
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS 82 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence 4799999999999999999999999999999999974 67899999999999999999999999999998876321111
Q ss_pred -CCCCCC----CCchhhhhhhcCCCCCCCCC--CCCCCCccccc---------CCC-------CCcccccccCCCCCCCC
Q 011450 121 -SNTSQG----VDPFELYSAFFGGSDGLFGG--VGEAGGINFNF---------GNK-------GNFGLDIRCGGTGAKSS 177 (485)
Q Consensus 121 -~~~~~~----~dp~d~f~~fFgg~~g~fg~--~g~~~g~~~~~---------~~~-------~~~~~di~C~GtG~~~~ 177 (485)
+.++.. .++.|+|++|||+..++.+. ..+..+.+... ... .....|..|.|+|...+
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 162 (380)
T PRK14297 83 GGFGGFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPG 162 (380)
T ss_pred CCCCCcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCC
Confidence 101111 13458899999742111000 00000000000 000 00112223999999988
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccc
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGE 257 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~ 257 (485)
....+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++...|..|+|.|++.+.++++|.||||+.+|++|+|+|+
T Consensus 163 ~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~ 242 (380)
T PRK14297 163 TSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQ 242 (380)
T ss_pred CcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecC
Confidence 88899999999999988888899999888999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCC
Q 011450 258 GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVP 337 (485)
Q Consensus 258 Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P 337 (485)
|+++..+..+|||||+|++++|+.|+|+|+||+++++|+|.||++|+++.|+|+||+++|+||+|+++|++++|+|+|||
T Consensus 243 G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~~~ri~g~G~p 322 (380)
T PRK14297 243 GEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFRLKGKGVP 322 (380)
T ss_pred ccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCCEEEEcCCCcC
Confidence 99987778899999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 338 DINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 338 ~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
..+. +.+|||||+|+|.||+.|+++|+++|++|+...
T Consensus 323 ~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~ 359 (380)
T PRK14297 323 RVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS 359 (380)
T ss_pred CCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 7653 468999999999999999999999999998764
No 13
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-71 Score=581.84 Aligned_cols=327 Identities=36% Similarity=0.679 Sum_probs=268.5
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCC-CC
Q 011450 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG-LS 121 (485)
Q Consensus 44 ~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~-~~ 121 (485)
.|||+||||+++||++|||+|||+||++||||+|++ +.|+++|++|++||+||+||+||+.||+||++++..+.++ ++
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~ 80 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence 489999999999999999999999999999999984 6789999999999999999999999999999876422110 00
Q ss_pred CCCCC---------------C-CchhhhhhhcCCCCCCCCCCC----CCCCccccc---------CCC-------CCccc
Q 011450 122 NTSQG---------------V-DPFELYSAFFGGSDGLFGGVG----EAGGINFNF---------GNK-------GNFGL 165 (485)
Q Consensus 122 ~~~~~---------------~-dp~d~f~~fFgg~~g~fg~~g----~~~g~~~~~---------~~~-------~~~~~ 165 (485)
.+..+ + ...|+|+.||++.++.|++.. +..+.+... ... .....
T Consensus 81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~ 160 (391)
T PRK14284 81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKS 160 (391)
T ss_pred CCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeecc
Confidence 00000 0 013566677754211111100 000000000 000 00112
Q ss_pred ccccCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCC
Q 011450 166 DIRCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 245 (485)
Q Consensus 166 di~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~G 245 (485)
|-.|+|+|++.+..+.+|+.|+|+|.++..+ |++++.++|+.|+|+|+++.+.|..|+|.|++.+.++++|.||||
T Consensus 161 C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G 236 (391)
T PRK14284 161 CDACSGSGANSSQGIKVCDRCKGSGQVVQSR----GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAG 236 (391)
T ss_pred CCCCcccccCCCCCCeecCccCCeeEEEEEe----ceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCC
Confidence 2239999999988899999999999877543 677778899999999999999999999999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccC--CeEEEEeCCCC
Q 011450 246 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE--GMKDLRIPSGV 323 (485)
Q Consensus 246 v~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tld--G~~~l~Ip~g~ 323 (485)
+.+|++|+|+|+|+++..++.||||||+|+++||+.|+|+|+||+++++|||.+|++|++++|+|++ +.++|+||+|+
T Consensus 237 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~ 316 (391)
T PRK14284 237 VDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGI 316 (391)
T ss_pred CCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCcc
Confidence 9999999999999999888899999999999999999999999999999999999999999999999 56899999999
Q ss_pred CCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 324 QPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 324 q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
++|++++|+|+|||..++ ..+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus 317 ~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~ 367 (391)
T PRK14284 317 QSGTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFAATE 367 (391)
T ss_pred CCCeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 999999999999997654 468999999999999999999999999998653
No 14
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.3e-71 Score=576.90 Aligned_cols=329 Identities=37% Similarity=0.705 Sum_probs=275.1
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhccccccchhccccccCcCcccC--C
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD--G 119 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~--~ 119 (485)
.+|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||++++.+... +
T Consensus 2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~ 81 (397)
T PRK14281 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG 81 (397)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCC
Confidence 4799999999999999999999999999999999974 678899999999999999999999999999988763211 1
Q ss_pred CCC-CCCCCCchhh---hhhhcCCCCCCCCCC------CCCCCcccccC-CCCCcccccc--------------------
Q 011450 120 LSN-TSQGVDPFEL---YSAFFGGSDGLFGGV------GEAGGINFNFG-NKGNFGLDIR-------------------- 168 (485)
Q Consensus 120 ~~~-~~~~~dp~d~---f~~fFgg~~g~fg~~------g~~~g~~~~~~-~~~~~~~di~-------------------- 168 (485)
+++ +..+.+..++ |++|||+..+ +++. +..++...... ..+.++.|+.
T Consensus 82 ~~~~~~~~~~~~d~f~~f~~~Fgg~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~ 160 (397)
T PRK14281 82 GPGYGGGGGDFNDIFSAFNDMFGGGAR-RGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKI 160 (397)
T ss_pred CCCCCcCCCCHHHHHHHHHHHhCCCcc-cccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEE
Confidence 100 1111233344 5578864211 1000 00000000000 0111233322
Q ss_pred --------cCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEE
Q 011450 169 --------CGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKV 240 (485)
Q Consensus 169 --------C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V 240 (485)
|.|+|+..+ .+.+|+.|+|.|.++..+++.+|++++.++|+.|+|+|+++.+.|+.|+|.|++.+.++++|
T Consensus 161 ~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V 239 (397)
T PRK14281 161 KKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKV 239 (397)
T ss_pred EeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEE
Confidence 999999876 67899999999999888888999998889999999999999999999999999999999999
Q ss_pred EcCCCCCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeC
Q 011450 241 VIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIP 320 (485)
Q Consensus 241 ~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip 320 (485)
.||||+++|++|+|+|+|+++..++.+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+|+||++.|+||
T Consensus 240 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip 319 (397)
T PRK14281 240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIP 319 (397)
T ss_pred ecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeC
Confidence 99999999999999999999877788999999999999999999999999999999999999999999999999899999
Q ss_pred CCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 321 SGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 321 ~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
+|+++|++++|+|+|||..+. +.+|||||+|+|.||+.|+++|+++|++|++.
T Consensus 320 ~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~ 372 (397)
T PRK14281 320 AGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELKKS 372 (397)
T ss_pred CccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence 999999999999999997654 46899999999999999999999999999864
No 15
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.6e-71 Score=573.57 Aligned_cols=333 Identities=36% Similarity=0.643 Sum_probs=277.4
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCC-
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG- 119 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~--~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~- 119 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||++|++||+||++++...+.+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 5899999999999999999999999999999999974 5688999999999999999999999999999876532111
Q ss_pred -CCCCCC-----CC-Cc--hhhhhhhcCCCCCCCCC-CCCCCCcccc--------c-CCC-------CCcccccccCCCC
Q 011450 120 -LSNTSQ-----GV-DP--FELYSAFFGGSDGLFGG-VGEAGGINFN--------F-GNK-------GNFGLDIRCGGTG 173 (485)
Q Consensus 120 -~~~~~~-----~~-dp--~d~f~~fFgg~~g~fg~-~g~~~g~~~~--------~-~~~-------~~~~~di~C~GtG 173 (485)
++++.. .+ ++ .|+|+.|||+.++.... ..+..+.+.. . ... .....|-.|+|+|
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G 162 (369)
T PRK14282 83 ESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTG 162 (369)
T ss_pred CCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccC
Confidence 110100 01 11 26788888642110000 0000000000 0 000 0011222399999
Q ss_pred CCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEE
Q 011450 174 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 253 (485)
Q Consensus 174 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir 253 (485)
++.+..+.+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+.+|++|+
T Consensus 163 ~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~ 242 (369)
T PRK14282 163 VEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLR 242 (369)
T ss_pred CCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEE
Confidence 99888889999999999999989999999999999999999999999999999999999999999999999999999999
Q ss_pred EccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCe-EEEEeCCCCCCCCEEEEc
Q 011450 254 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQ 332 (485)
Q Consensus 254 ~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~-~~l~Ip~g~q~G~~irl~ 332 (485)
|+|+|+++..++.+|||||+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||+ ++|+||+|+++|++++|+
T Consensus 243 ~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~ 322 (369)
T PRK14282 243 ITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLK 322 (369)
T ss_pred EecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEEC
Confidence 9999999887889999999999999999999999999999999999999999999999996 799999999999999999
Q ss_pred CCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhcC
Q 011450 333 QMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKS 376 (485)
Q Consensus 333 g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~~ 376 (485)
|+|||..+. +.+|||||+|+|.+|+.|+++++++|++|+++..
T Consensus 323 GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~~~ 365 (369)
T PRK14282 323 GKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKELAKKRG 365 (369)
T ss_pred CCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 999997543 4689999999999999999999999999988754
No 16
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-70 Score=574.51 Aligned_cols=315 Identities=34% Similarity=0.626 Sum_probs=263.6
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccC---
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD--- 118 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~--- 118 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+|||||+||++||+||+++...+..
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~~ 87 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRR 87 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccccc
Confidence 589999999999999999999999999999999997 4678999999999999999999999999999753321110
Q ss_pred --C-CCCCC-------CCCCchhhh---------------hhhcCCCCCCCCCCCCCCCcccccCCCCCcccc-------
Q 011450 119 --G-LSNTS-------QGVDPFELY---------------SAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLD------- 166 (485)
Q Consensus 119 --~-~~~~~-------~~~dp~d~f---------------~~fFgg~~g~fg~~g~~~g~~~~~~~~~~~~~d------- 166 (485)
+ ++.++ .++++.++| +.||++. + + +. ....+.++.|
T Consensus 88 ~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~----~--~--~~----~~~~~~~g~di~~~l~l 155 (392)
T PRK14279 88 FDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRG----G--G--SA----RPSRPRRGNDLETETTL 155 (392)
T ss_pred ccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCC----C--c--cc----ccCCCCCCCCeEEEEEE
Confidence 0 00000 012222232 2233210 0 0 00 0001112222
Q ss_pred ---------------------cccCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccc
Q 011450 167 ---------------------IRCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRR 225 (485)
Q Consensus 167 ---------------------i~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~ 225 (485)
-.|+|+|++....+.+|+.|+|+|.++..+ |++++.++|+.|+|+|+++...|..
T Consensus 156 tLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~i~~~C~~ 231 (392)
T PRK14279 156 DFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ----GAFGFSEPCTDCRGTGSIIEDPCEE 231 (392)
T ss_pred EHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe----cceEEEEecCCCCceeEEeCCcCCC
Confidence 229999999988899999999999876543 5667779999999999999999999
Q ss_pred cCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCce
Q 011450 226 CGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTS 305 (485)
Q Consensus 226 C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~ 305 (485)
|+|.|++.+.++++|.||||+++|++|+|+|+|+++++++.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|++
T Consensus 232 C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~ 311 (392)
T PRK14279 232 CKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGST 311 (392)
T ss_pred CCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCce
Confidence 99999999999999999999999999999999999887888999999999999999999999999999999999999999
Q ss_pred EEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 306 MEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 306 i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
+.|+|+||+++|+||+|+++|++++|+|+|||.. .+.+|||||+|+|.+|+.|+++|+++|++|+.+.
T Consensus 312 ~~v~~ldg~i~v~Ip~g~~~g~~iri~g~G~p~~--~~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~~~ 379 (392)
T PRK14279 312 LSVPTLDGPVGVKVPAGTADGRILRVRGRGVPKR--SGGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAE 379 (392)
T ss_pred EEEEcCCceEEEEECCCCCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999963 2468999999999999999999999999999763
No 17
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.9e-70 Score=567.14 Aligned_cols=330 Identities=29% Similarity=0.566 Sum_probs=274.4
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~ 121 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||++|+.||+||++++.++.+.++
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~ 81 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG 81 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCccc
Confidence 4799999999999999999999999999999999974 678899999999999999999999999999988754321100
Q ss_pred --CCCC--C---CCchhhhhhhcCCCCCCCCCCCCCCCcccc--------c-CCC-------CCcccccccCCCCCCCCC
Q 011450 122 --NTSQ--G---VDPFELYSAFFGGSDGLFGGVGEAGGINFN--------F-GNK-------GNFGLDIRCGGTGAKSSN 178 (485)
Q Consensus 122 --~~~~--~---~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~--------~-~~~-------~~~~~di~C~GtG~~~~~ 178 (485)
++.. + .++.|+|+.|||+..+......+..+.+.. . ... .....|-.|+|+|++.+.
T Consensus 82 ~~~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 161 (365)
T PRK14285 82 FSGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGT 161 (365)
T ss_pred cCCCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCC
Confidence 0000 0 134578899986421110000000000000 0 000 001122339999999888
Q ss_pred CcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEcccc
Q 011450 179 CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEG 258 (485)
Q Consensus 179 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~G 258 (485)
.+..|+.|+|+|.++. .+|++++.++|+.|+|+|+++.+.|..|+|.|++.+.++++|.||||+++|++|+|+|+|
T Consensus 162 ~~~~C~~C~G~G~~~~----~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G 237 (365)
T PRK14285 162 SPSICNMCNGSGRVMQ----GGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKG 237 (365)
T ss_pred CCccCCCccCceeEEe----cCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeecc
Confidence 8899999999998764 357787789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCe-EEEEeCCCCCCCCEEEEcCCCCC
Q 011450 259 NFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVP 337 (485)
Q Consensus 259 d~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~-~~l~Ip~g~q~G~~irl~g~G~P 337 (485)
++++.++.+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+|+||+ ++|.||+|+++|++++|+|+|||
T Consensus 238 ~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p 317 (365)
T PRK14285 238 SVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMP 317 (365)
T ss_pred ccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCcc
Confidence 99887788999999999999999999999999999999999999999999999995 79999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhcCC
Q 011450 338 DINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSP 377 (485)
Q Consensus 338 ~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~~~ 377 (485)
..+. ..+|||||+|+|.+|+.|+++|+++|++|+++.++
T Consensus 318 ~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~~~~ 356 (365)
T PRK14285 318 ILHT-EKFGNLILIIKIKTPKNLNSNAIKLLENLSKELKD 356 (365)
T ss_pred CCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHhcc
Confidence 7654 35799999999999999999999999999988765
No 18
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.5e-70 Score=565.07 Aligned_cols=325 Identities=36% Similarity=0.648 Sum_probs=269.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~ 121 (485)
.+|||++|||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|+.||+||++++++++++++
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g 82 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG 82 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence 5799999999999999999999999999999999974 678899999999999999999999999999988764211111
Q ss_pred CCCCCCCc----hhhhhhhcCCCCCCCCCC--CCCCCccccc---------CCC-------CCcccccccCCCCCCCCCC
Q 011450 122 NTSQGVDP----FELYSAFFGGSDGLFGGV--GEAGGINFNF---------GNK-------GNFGLDIRCGGTGAKSSNC 179 (485)
Q Consensus 122 ~~~~~~dp----~d~f~~fFgg~~g~fg~~--g~~~g~~~~~---------~~~-------~~~~~di~C~GtG~~~~~~ 179 (485)
.. ...++ .|+|+.|||+. ++.+.. .+..+.+... ... .....+..|+|+|+.....
T Consensus 83 ~~-~~~~~~~~f~d~f~~~fg~g-~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~ 160 (373)
T PRK14301 83 FS-SAEDIFSHFSDIFGDLFGFS-GGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTS 160 (373)
T ss_pred cc-cccccccchHHHHHHHhhcc-CcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCC
Confidence 10 01122 25666666421 000000 0000000000 000 0011222399999998888
Q ss_pred cccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccC
Q 011450 180 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGN 259 (485)
Q Consensus 180 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd 259 (485)
+.+|+.|+|+|.+... .|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus 161 ~~~C~~C~G~G~v~~~----~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 236 (373)
T PRK14301 161 PETCRHCGGSGQVRQS----QGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGE 236 (373)
T ss_pred CcccCCccCeeEEEEE----eeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEecccc
Confidence 8999999999987653 267788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCC
Q 011450 260 FDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDI 339 (485)
Q Consensus 260 ~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~ 339 (485)
++..++.+|||||+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||+++|+||+|+++|++++|+|+|||..
T Consensus 237 ~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~ri~g~G~p~~ 316 (373)
T PRK14301 237 PGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFRLRGKGLPYL 316 (373)
T ss_pred CCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEEEcCCCCCCC
Confidence 98777889999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 340 NNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 340 ~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
+. ..+|||||+|+|.+|+.|+++|+++|++|+.+
T Consensus 317 ~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~~ 350 (373)
T PRK14301 317 GS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEAL 350 (373)
T ss_pred CC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 54 46899999999999999999999999999875
No 19
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-69 Score=562.37 Aligned_cols=326 Identities=36% Similarity=0.685 Sum_probs=271.6
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~ 121 (485)
.+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||+||+++++++..+ +
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~-~ 81 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFS-G 81 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCC-C
Confidence 589999999999999999999999999999999998 46789999999999999999999999999999987642111 1
Q ss_pred CCCCC--C-CchhhhhhhcCCCCCCCCCC---CCCCCccccc---------CCC-------CCcccccccCCCCCCCCCC
Q 011450 122 NTSQG--V-DPFELYSAFFGGSDGLFGGV---GEAGGINFNF---------GNK-------GNFGLDIRCGGTGAKSSNC 179 (485)
Q Consensus 122 ~~~~~--~-dp~d~f~~fFgg~~g~fg~~---g~~~g~~~~~---------~~~-------~~~~~di~C~GtG~~~~~~ 179 (485)
.++.. + ++.|+|++|||.. +..++. .+..+.+... ... .....+..|.|+|......
T Consensus 82 ~~~~~~~~~~~~d~f~~~fg~g-~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~ 160 (366)
T PRK14294 82 FSGFDDIFSSFGDIFEDFFGFG-GGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTS 160 (366)
T ss_pred cCccccchhhhhhhHHHhhccC-CCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCC
Confidence 01110 1 2347888888610 100000 0000000000 000 0011223399999998888
Q ss_pred cccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccC
Q 011450 180 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGN 259 (485)
Q Consensus 180 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd 259 (485)
+.+|+.|+|+|.++.. .|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus 161 ~~~C~~C~G~G~~~~~----~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 236 (366)
T PRK14294 161 PTTCPQCGGSGQVTQS----QGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGE 236 (366)
T ss_pred cccCCCcCCeEEEEEE----eeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCcc
Confidence 8999999999987643 277777899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCC
Q 011450 260 FDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDI 339 (485)
Q Consensus 260 ~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~ 339 (485)
++..++.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||+++|+||+|+++|++++|+|+|||..
T Consensus 237 ~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~~ 316 (366)
T PRK14294 237 AGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSL 316 (366)
T ss_pred CCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCCC
Confidence 98778889999999999999999999999999999999999999999999999998999999999999999999999976
Q ss_pred CCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 340 NNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 340 ~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
+. ..+|||||+|+|.+|+.|+++|+++|++|+.+.
T Consensus 317 ~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~ 351 (366)
T PRK14294 317 RG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARLE 351 (366)
T ss_pred CC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 54 368999999999999999999999999998763
No 20
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.2e-69 Score=560.74 Aligned_cols=327 Identities=33% Similarity=0.631 Sum_probs=270.1
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCccc--CC-
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY--DG- 119 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~--~~- 119 (485)
.+|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+|+.+|+.||+||++++.... ++
T Consensus 2 ~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~ 81 (372)
T PRK14300 2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81 (372)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCC
Confidence 379999999999999999999999999999999998778999999999999999999999999999998876321 10
Q ss_pred CCCCCCCCCchhhhhhhcCCCCCCCCCCCC----CCCccccc---------CCC-------CCcccccccCCCCCCCCCC
Q 011450 120 LSNTSQGVDPFELYSAFFGGSDGLFGGVGE----AGGINFNF---------GNK-------GNFGLDIRCGGTGAKSSNC 179 (485)
Q Consensus 120 ~~~~~~~~dp~d~f~~fFgg~~g~fg~~g~----~~g~~~~~---------~~~-------~~~~~di~C~GtG~~~~~~ 179 (485)
++.++.+.++.++|++||+++.++.+...+ ..+.+... ... .....+-.|+|+|...+..
T Consensus 82 g~~~~~~~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~ 161 (372)
T PRK14300 82 GNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGET 161 (372)
T ss_pred CCCCccccchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCC
Confidence 100111113346677777542111000000 00000000 000 0011222399999998888
Q ss_pred cccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccC
Q 011450 180 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGN 259 (485)
Q Consensus 180 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd 259 (485)
+.+|+.|+|+|.++.. .|++++..+|+.|+|.|+++...|..|+|.|++.+.++++|.||||+.+|++|+++|+|+
T Consensus 162 ~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~ 237 (372)
T PRK14300 162 VTTCDACSGVGATRMQ----QGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGE 237 (372)
T ss_pred CccCCCccCeEEEEEe----eceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEecccc
Confidence 9999999999987643 377887889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCC-eEEEEeCCCCCCCCEEEEcCCCCCC
Q 011450 260 FDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG-MKDLRIPSGVQPGDTVKLQQMGVPD 338 (485)
Q Consensus 260 ~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG-~~~l~Ip~g~q~G~~irl~g~G~P~ 338 (485)
++.+++.+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+|| .++|+||+|+++|++++|+|+|||.
T Consensus 238 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~ 317 (372)
T PRK14300 238 AGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSK 317 (372)
T ss_pred CCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCC
Confidence 987788999999999999999999999999999999999999999999999998 5899999999999999999999997
Q ss_pred CCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 339 INNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 339 ~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
.++ ..+|||||+|+|.+|+.|+++|+++|++|+..
T Consensus 318 ~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~~ 352 (372)
T PRK14300 318 MRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKKE 352 (372)
T ss_pred CCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 653 46899999999999999999999999999853
No 21
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.1e-69 Score=564.67 Aligned_cols=317 Identities=39% Similarity=0.654 Sum_probs=265.6
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhccccccchhcc----ccccCcCcc
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDR----FGEAGITGE 116 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsDp~kR~~YD~----~G~~~~~~~ 116 (485)
+.+|||+||||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||++|+.||+ ||++++.++
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~ 86 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG 86 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence 35899999999999999999999999999999999974 5789999999999999999999999999 999887532
Q ss_pred cCCCCCCCCCCCchhhhhhh----------------cCCCCCCCCCCCCCCCcccccCCCCCccc---------------
Q 011450 117 YDGLSNTSQGVDPFELYSAF----------------FGGSDGLFGGVGEAGGINFNFGNKGNFGL--------------- 165 (485)
Q Consensus 117 ~~~~~~~~~~~dp~d~f~~f----------------Fgg~~g~fg~~g~~~g~~~~~~~~~~~~~--------------- 165 (485)
.++++.++..+++.++|..+ |+.+ |++.+ ....+.++.
T Consensus 87 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~---fg~~~--------~~~~~~~g~di~~~l~lsLee~~~ 155 (389)
T PRK14295 87 PGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGL---FNRGG--------RRTQPRRGADVESEVTLSFTEAID 155 (389)
T ss_pred CCCCCCCCCCcccccccccccccccccccccchhhhhccc---ccCCC--------CCCCCCCCCCEEEEEEEEHHHHhC
Confidence 11000011112333333221 2110 11000 000011122
Q ss_pred -------------ccccCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCcee
Q 011450 166 -------------DIRCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEV 232 (485)
Q Consensus 166 -------------di~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v 232 (485)
|..|.|+|++.+..+.+|+.|+|+|.++..+ |.+++.++|+.|+|+|+++...|..|.|.|++
T Consensus 156 G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~ 231 (389)
T PRK14295 156 GATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS----GGFSLSEPCPDCKGRGLIADDPCLVCKGSGRA 231 (389)
T ss_pred CceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe----cceEEEEecCCCcceeEEeccCCCCCCCCceE
Confidence 2239999999988889999999999887653 56677789999999999999999999999999
Q ss_pred eeceEEEEEcCCCCCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccC
Q 011450 233 QSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE 312 (485)
Q Consensus 233 ~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tld 312 (485)
.+.++++|.||+|+++|++|+|+|+|++...++.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|++++|+|+|
T Consensus 232 ~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tld 311 (389)
T PRK14295 232 KSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLG 311 (389)
T ss_pred eeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCC
Confidence 99999999999999999999999999998778889999999999999999999999999999999999999999999999
Q ss_pred C-eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 313 G-MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 313 G-~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
| .+.|+||+|+++|++++|+|+|||..+ +.+|||||+|+|.||+.|+++|+++|++|++..
T Consensus 312 G~~~~v~ip~g~~~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~~~ 373 (389)
T PRK14295 312 GPPVTVKLPPGTPNGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFREAT 373 (389)
T ss_pred CCEEEEEECCccCCCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9 589999999999999999999999643 468999999999999999999999999998753
No 22
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.9e-69 Score=558.48 Aligned_cols=326 Identities=38% Similarity=0.669 Sum_probs=268.4
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~ 121 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||.+|+.||+||++++..+.++++
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 82 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG 82 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence 579999999999999999999999999999999997 4678899999999999999999999999999988764321111
Q ss_pred CCC-CCC-C-chhhhhhhcCCCCCCCCCCCCCCCcccc--------c-CCC-------CCcccccccCCCCCCCCCCccc
Q 011450 122 NTS-QGV-D-PFELYSAFFGGSDGLFGGVGEAGGINFN--------F-GNK-------GNFGLDIRCGGTGAKSSNCIQS 182 (485)
Q Consensus 122 ~~~-~~~-d-p~d~f~~fFgg~~g~fg~~g~~~g~~~~--------~-~~~-------~~~~~di~C~GtG~~~~~~~~~ 182 (485)
.++ .++ + +.++|+.|||+.++ .+...+..+.+.. . ... .....|-.|.|+|.........
T Consensus 83 ~~~~~~~~~~f~~~f~~~fgg~~~-~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~ 161 (371)
T PRK10767 83 FGGGGGFGDIFGDIFGDIFGGGRG-GGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKT 161 (371)
T ss_pred CCCccccccchhhhhhhhccCCcc-ccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCcc
Confidence 011 011 2 22456666643100 0000000000000 0 000 0011223399999998888899
Q ss_pred CCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCC
Q 011450 183 CKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDR 262 (485)
Q Consensus 183 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~ 262 (485)
|+.|+|+|.++..+ |++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+.+|++|+|+|+|+++.
T Consensus 162 C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~ 237 (371)
T PRK10767 162 CPTCHGAGQVRMQQ----GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGE 237 (371)
T ss_pred CCCCCCeeEEEEee----ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCC
Confidence 99999999876543 67777789999999999999999999999999999999999999999999999999999977
Q ss_pred CCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCC
Q 011450 263 RRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNP 342 (485)
Q Consensus 263 ~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~ 342 (485)
.++.+|||||+|+++||+.|+|+|+||++++.|+|.+|++|+++.|+|+||.+.|+||+|+++|++++|+|+|||..+.
T Consensus 238 ~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~G~p~~~~- 316 (371)
T PRK10767 238 RGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLRGKGVKSVRS- 316 (371)
T ss_pred CCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEECCCCcCCCCC-
Confidence 7788999999999999999999999999999999999999999999999998899999999999999999999997654
Q ss_pred CCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 343 SVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 343 ~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
+.+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus 317 ~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~~ 348 (371)
T PRK10767 317 GARGDLYCQVVVETPVNLTKRQKELLEEFEES 348 (371)
T ss_pred CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 46899999999999999999999999999864
No 23
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-68 Score=558.62 Aligned_cols=329 Identities=37% Similarity=0.661 Sum_probs=273.2
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC-C
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL-S 121 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~-~ 121 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+|||||.+|+.||+||++++...++.. +
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~ 81 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCcccc
Confidence 579999999999999999999999999999999999888999999999999999999999999999998775432110 0
Q ss_pred ---CCC-CCCCchhhhhhhcCCCC--CCCCCCCCCCCcccccCCCCCccccc----------------------------
Q 011450 122 ---NTS-QGVDPFELYSAFFGGSD--GLFGGVGEAGGINFNFGNKGNFGLDI---------------------------- 167 (485)
Q Consensus 122 ---~~~-~~~dp~d~f~~fFgg~~--g~fg~~g~~~g~~~~~~~~~~~~~di---------------------------- 167 (485)
.+. ...++.|+|++||+.++ +.|++.+..++... ....+.++.|+
T Consensus 82 ~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~-~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~ 160 (382)
T PRK14291 82 QEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRK-TYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCE 160 (382)
T ss_pred ccccccccCCCHHHHHHHHHHhcccccccccccccccccc-ccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCC
Confidence 000 12255678888853221 11221100000000 00011122232
Q ss_pred ccCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCC
Q 011450 168 RCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS 247 (485)
Q Consensus 168 ~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~ 247 (485)
.|+|+|++.+....+|+.|+|+|.++.. .+++++.++|+.|+|+|. +...|..|+|.|++.+.++++|.||||+.
T Consensus 161 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 235 (382)
T PRK14291 161 ACGGTGYDPGSGEKVCPTCGGSGEIYQR----GGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPPGVD 235 (382)
T ss_pred CCccccCCCCCCCccCCCCCCceEEEEe----cceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCCCCC
Confidence 2999999998889999999999987654 256777789999999995 68889999999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCe-EEEEeCCCCCCC
Q 011450 248 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPG 326 (485)
Q Consensus 248 dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~-~~l~Ip~g~q~G 326 (485)
+|++|+|+|+|+++..++.+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+|+||+ ++|+||+|+++|
T Consensus 236 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G 315 (382)
T PRK14291 236 NGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEG 315 (382)
T ss_pred CCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCC
Confidence 9999999999999888899999999999999999999999999999999999999999999999996 799999999999
Q ss_pred CEEEEcCCCCCCCCCCCCCccEEEEEEEEcCC--CCC------hhHHHHHHHHHhhcCCC
Q 011450 327 DTVKLQQMGVPDINNPSVRGDHLFIVNVLIPK--DIS------DPERALVEEIAFLKSPG 378 (485)
Q Consensus 327 ~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~--~ls------~~q~~ll~~l~~~~~~~ 378 (485)
++++|+|+|||..+. ..+|||||+|+|.||+ .|+ ++|++||++|+.+..+.
T Consensus 316 ~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~~~~~~ 374 (382)
T PRK14291 316 DKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDKLLPEP 374 (382)
T ss_pred CEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHhhcCCc
Confidence 999999999998654 4689999999999998 599 99999999999877543
No 24
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=1e-68 Score=554.09 Aligned_cols=329 Identities=41% Similarity=0.713 Sum_probs=277.2
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCC-C-CC
Q 011450 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG-L-SN 122 (485)
Q Consensus 45 d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~-~-~~ 122 (485)
|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|+.||+||+++++++..+ + +.
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~ 80 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF 80 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence 799999999999999999999999999999999877899999999999999999999999999999887642211 1 00
Q ss_pred CCC---C-CCchhhhhhhcCCCCCC-CC-CCCCCCCcccc---------cCCC-------CCcccccccCCCCCCCCCCc
Q 011450 123 TSQ---G-VDPFELYSAFFGGSDGL-FG-GVGEAGGINFN---------FGNK-------GNFGLDIRCGGTGAKSSNCI 180 (485)
Q Consensus 123 ~~~---~-~dp~d~f~~fFgg~~g~-fg-~~g~~~g~~~~---------~~~~-------~~~~~di~C~GtG~~~~~~~ 180 (485)
.+. + .++.++|+.|||+..+. .. ...+..+.+.. .... .....+-.|.|+|+......
T Consensus 81 ~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~ 160 (354)
T TIGR02349 81 NGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDP 160 (354)
T ss_pred CCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCC
Confidence 000 1 13457899999742110 00 00000000000 0000 00112223999999988888
Q ss_pred ccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCC
Q 011450 181 QSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNF 260 (485)
Q Consensus 181 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~ 260 (485)
.+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++...|..|+|.|++.+.++++|.||||+++|++|+|+|+|++
T Consensus 161 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~ 240 (354)
T TIGR02349 161 KTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNA 240 (354)
T ss_pred ccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccC
Confidence 99999999999998888999999998999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCC
Q 011450 261 DRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDIN 340 (485)
Q Consensus 261 ~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~ 340 (485)
...++.+|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+|+||.++|.||+++++|++++|+|+|||..+
T Consensus 241 ~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~G~p~~~ 320 (354)
T TIGR02349 241 GENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKGVPRLR 320 (354)
T ss_pred CCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCcEEEECCCCcCCCC
Confidence 77778899999999999999999999999999999999999999999999999889999999999999999999999765
Q ss_pred CCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 341 NPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 341 ~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
. ..+|||||+|+|.+|+.|+.+|+++|++|+..
T Consensus 321 ~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~ 353 (354)
T TIGR02349 321 G-NGRGDLLVTVKVETPKNLSKEQKELLEELAEA 353 (354)
T ss_pred C-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 4 36899999999999999999999999999753
No 25
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.8e-68 Score=557.87 Aligned_cols=330 Identities=39% Similarity=0.701 Sum_probs=276.8
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL 120 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~ 120 (485)
..+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|++||+||+++++++.+.+
T Consensus 3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~ 82 (386)
T PRK14289 3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG 82 (386)
T ss_pred ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCC
Confidence 3689999999999999999999999999999999997 467999999999999999999999999999998875321111
Q ss_pred CCCCCCCCchhhhhh---hcCCCCCCCCCCCCCCCcccccCCCCCcccc----------------------------ccc
Q 011450 121 SNTSQGVDPFELYSA---FFGGSDGLFGGVGEAGGINFNFGNKGNFGLD----------------------------IRC 169 (485)
Q Consensus 121 ~~~~~~~dp~d~f~~---fFgg~~g~fg~~g~~~g~~~~~~~~~~~~~d----------------------------i~C 169 (485)
+.++.++++.++|+. +|+++.+++++.+..++ .. ......++.| -.|
T Consensus 83 ~~~~~~~~~~~~f~~f~~~fg~~~gg~~~~~~~~~-~~-~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C 160 (386)
T PRK14289 83 GFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGG-GG-SQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC 160 (386)
T ss_pred CCCCCCcChhhhhHHhhhhhcccccCccccccccc-cc-ccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence 111112344455443 36532111110000000 00 0001112222 229
Q ss_pred CCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCC
Q 011450 170 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 249 (485)
Q Consensus 170 ~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG 249 (485)
+|+|+........|+.|+|+|.++..+++.+|+++...+|+.|+|+|+++...|..|+|.|++.+.++++|.||+|+++|
T Consensus 161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G 240 (386)
T PRK14289 161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG 240 (386)
T ss_pred CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence 99999988889999999999999988889999998889999999999999999999999999999999999999999999
Q ss_pred CEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEE
Q 011450 250 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 329 (485)
Q Consensus 250 ~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~i 329 (485)
++|+|+|+|++...++.+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|++|+++|+||+|+++|+++
T Consensus 241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ 320 (386)
T PRK14289 241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVL 320 (386)
T ss_pred CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCcEE
Confidence 99999999998777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 330 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 330 rl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
+|+|+|+|..++ +.+|||||+|+|.||+.|+++|+++|++|++.
T Consensus 321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~ 364 (386)
T PRK14289 321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENS 364 (386)
T ss_pred EECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence 999999997654 46899999999999999999999999999885
No 26
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.8e-68 Score=556.38 Aligned_cols=329 Identities=38% Similarity=0.711 Sum_probs=273.4
Q ss_pred ccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC
Q 011450 41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL 120 (485)
Q Consensus 41 ~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~ 120 (485)
+..+|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|++||+||++++.+....+
T Consensus 2 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~~ 81 (378)
T PRK14283 2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQED 81 (378)
T ss_pred CCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccccccc
Confidence 35789999999999999999999999999999999998888999999999999999999999999999998775211100
Q ss_pred --CCCC-----CCC--Cchhhhhhh-cCCCCCCCCCCCCCCCccccc---------CCC-------CCcccccccCCCCC
Q 011450 121 --SNTS-----QGV--DPFELYSAF-FGGSDGLFGGVGEAGGINFNF---------GNK-------GNFGLDIRCGGTGA 174 (485)
Q Consensus 121 --~~~~-----~~~--dp~d~f~~f-Fgg~~g~fg~~g~~~g~~~~~---------~~~-------~~~~~di~C~GtG~ 174 (485)
.... .++ ++.++|+.| |++. +..++..+.+... ... .....+-.|.|+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~f~~~~fgg~----~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~ 157 (378)
T PRK14283 82 IFNNINFEDIFQGFGFGIGNIFDMFGFGGG----SRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRA 157 (378)
T ss_pred cccccCccccccccccchhhhccccccCCC----CCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCcccc
Confidence 0000 000 112333333 3210 0000000000000 000 00112233999999
Q ss_pred CCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEE
Q 011450 175 KSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 254 (485)
Q Consensus 175 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~ 254 (485)
..+.....|+.|+|+|.++..+++.+|++++..+|+.|+|+|+.+...|..|+|.|++.+.+.++|.||||+++|++|+|
T Consensus 158 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l 237 (378)
T PRK14283 158 EPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV 237 (378)
T ss_pred CCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEE
Confidence 98888899999999999998888889999888999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCC
Q 011450 255 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQM 334 (485)
Q Consensus 255 ~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~ 334 (485)
+|+|++...++.+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|+||.+.|+||+|+++|++++|+|+
T Consensus 238 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~ 317 (378)
T PRK14283 238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGH 317 (378)
T ss_pred eccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCC
Confidence 99999877778899999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred CCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 335 GVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 335 G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
|||.... ..+|||||+|+|.||+.|+++|+++|++|++.
T Consensus 318 G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~~ 356 (378)
T PRK14283 318 GMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFASI 356 (378)
T ss_pred CCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence 9997654 46899999999999999999999999999864
No 27
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-68 Score=553.33 Aligned_cols=326 Identities=35% Similarity=0.642 Sum_probs=273.5
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCCCC
Q 011450 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNT 123 (485)
Q Consensus 44 ~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~~~ 123 (485)
.|||++|||+++||.+|||+|||+||++||||+|++++|+++|++|++||++|+||.+|+.||+||+++..+..++++.+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~ 81 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFG 81 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccC
Confidence 49999999999999999999999999999999998888999999999999999999999999999998643211111111
Q ss_pred CCCCCchhhhhhhcCCCCCCCCC----CCCCCCccccc---------CCCC-------CcccccccCCCCCCCCC-Cccc
Q 011450 124 SQGVDPFELYSAFFGGSDGLFGG----VGEAGGINFNF---------GNKG-------NFGLDIRCGGTGAKSSN-CIQS 182 (485)
Q Consensus 124 ~~~~dp~d~f~~fFgg~~g~fg~----~g~~~g~~~~~---------~~~~-------~~~~di~C~GtG~~~~~-~~~~ 182 (485)
+.++|+.|+|+.|||+.. +++ .++..+.+... .... ....|-.|+|+|..... ...+
T Consensus 82 ~~~~d~~d~f~~~fg~~~--~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~ 159 (371)
T PRK14292 82 GMGFDPMDIFEQLFGGAG--FGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKT 159 (371)
T ss_pred ccCCChHHHHHHhhCCCC--cCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCcc
Confidence 223577899999997531 111 00000000000 0000 01112239999987664 3789
Q ss_pred CCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCC
Q 011450 183 CKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDR 262 (485)
Q Consensus 183 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~ 262 (485)
|+.|+|+|.+...+++.+|++++.++|+.|+|.|..+...|..|.|.|++.+.++++|.||+|+.+|++|+|+|+|+++.
T Consensus 160 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~ 239 (371)
T PRK14292 160 CPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGP 239 (371)
T ss_pred CCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCC
Confidence 99999999998888888899988899999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCC
Q 011450 263 RRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNP 342 (485)
Q Consensus 263 ~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~ 342 (485)
.+ . |||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|+..|+||+|+++|++++|+|+|||..++
T Consensus 240 ~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~p~~~~- 316 (371)
T PRK14292 240 GG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQGMPRLQG- 316 (371)
T ss_pred CC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcEEEECCCCCCCCCC-
Confidence 44 3 99999999999999999999999999999999999999999999998889999999999999999999997654
Q ss_pred CCCccEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 011450 343 SVRGDHLFIVNVLIPKDISDPERALVEEIAFL 374 (485)
Q Consensus 343 ~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~ 374 (485)
..+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus 317 ~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~ 348 (371)
T PRK14292 317 AGTGDLIVEYEIAVPKQLSPEAREALEAYARA 348 (371)
T ss_pred CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 35899999999999999999999999999864
No 28
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-67 Score=549.06 Aligned_cols=331 Identities=44% Similarity=0.798 Sum_probs=279.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN 122 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~~ 122 (485)
..|||+||||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.+|++||+||++++.++.+.++.
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~ 81 (374)
T PRK14293 2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDM 81 (374)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCc
Confidence 47999999999999999999999999999999999988899999999999999999999999999999877532110000
Q ss_pred CCCCCCchhhhhhhcCCCCCCCCCCC-------CCCCcccc--------c-CCCC-------CcccccccCCCCCCCCCC
Q 011450 123 TSQGVDPFELYSAFFGGSDGLFGGVG-------EAGGINFN--------F-GNKG-------NFGLDIRCGGTGAKSSNC 179 (485)
Q Consensus 123 ~~~~~dp~d~f~~fFgg~~g~fg~~g-------~~~g~~~~--------~-~~~~-------~~~~di~C~GtG~~~~~~ 179 (485)
+.. .++.|+|++||+++++ +++.+ +..+.+.. . .... ....|-.|.|+|+.....
T Consensus 82 ~~~-~~~~d~f~~~fg~~~~-~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~ 159 (374)
T PRK14293 82 GDM-GGFADIFETFFSGFGG-AGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTG 159 (374)
T ss_pred ccc-cchHHHHHHHhcccCC-CCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCC
Confidence 101 1234789999964211 11000 00000000 0 0000 011222399999998888
Q ss_pred cccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccC
Q 011450 180 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGN 259 (485)
Q Consensus 180 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd 259 (485)
..+|+.|+|+|.++..+++++|++++.++|+.|.|.|+++...|..|.|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus 160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~ 239 (374)
T PRK14293 160 PTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGD 239 (374)
T ss_pred CeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCcc
Confidence 89999999999998888899999998999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCC
Q 011450 260 FDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDI 339 (485)
Q Consensus 260 ~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~ 339 (485)
+...+..+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+++|+||+++++|++++|+|+|||..
T Consensus 240 ~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~G~p~~ 319 (374)
T PRK14293 240 AGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKGVPRL 319 (374)
T ss_pred CCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCCCCCCC
Confidence 87667789999999999999999999999999999999999999999999999988899999999999999999999986
Q ss_pred CCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 011450 340 NNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 340 ~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
+.++.+|||||+|+|++|+.|+++|+++|++|+++.
T Consensus 320 ~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~~ 355 (374)
T PRK14293 320 GNPVARGDHLITVKVKIPTRISDEERELLEKLAKIK 355 (374)
T ss_pred CCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 654568999999999999999999999999998764
No 29
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-67 Score=544.89 Aligned_cols=328 Identities=34% Similarity=0.644 Sum_probs=268.5
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC
Q 011450 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (485)
Q Consensus 44 ~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~--~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~ 121 (485)
+|||+||||+++||.+|||+|||+||++||||+|++. .|+++|++|++||++|+||.+|+.||+||++++++++++.+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~ 82 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN 82 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence 7999999999999999999999999999999999752 68999999999999999999999999999987753211100
Q ss_pred CCC--CCCCchhhhhhhcCCCCCC--CCCCCCCC-----CcccccC---------CC-------CCcccccccCCCCCCC
Q 011450 122 NTS--QGVDPFELYSAFFGGSDGL--FGGVGEAG-----GINFNFG---------NK-------GNFGLDIRCGGTGAKS 176 (485)
Q Consensus 122 ~~~--~~~dp~d~f~~fFgg~~g~--fg~~g~~~-----g~~~~~~---------~~-------~~~~~di~C~GtG~~~ 176 (485)
.++ ...++.|+|+.|||+..+. |++.+... +.+.... .. .....+-.|+|+|+..
T Consensus 83 ~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~ 162 (365)
T PRK14290 83 WDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKN 162 (365)
T ss_pred ccccccccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCC
Confidence 000 0125678999999742110 11100000 0000000 00 0001122399999887
Q ss_pred CCCcccCCCCCCCCeeeeeeecCCceee--eEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEE
Q 011450 177 SNCIQSCKACWGRGGVLKTQRTPFGLIS--QVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 254 (485)
Q Consensus 177 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~--~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~ 254 (485)
. ...+|+.|+|+|.+...+. +|++. ...+|+.|+|.|+++...|..|+|.|++.+.++++|.||||+.+|++|+|
T Consensus 163 ~-~~~~C~~C~G~G~~~~~~~--~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 239 (365)
T PRK14290 163 G-KLITCPTCHGTGQQRIVRG--QGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV 239 (365)
T ss_pred C-CCccCCCCCCcCEEEEEec--cCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence 5 6789999999998766553 45553 35799999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCC
Q 011450 255 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQM 334 (485)
Q Consensus 255 ~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~ 334 (485)
+|+|+. .++.||||||+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|++|.++|+||+|+++|++++|+|+
T Consensus 240 ~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~iri~g~ 317 (365)
T PRK14290 240 KGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGA 317 (365)
T ss_pred ccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEEECCC
Confidence 999986 578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHHHhhcCC
Q 011450 335 GVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSP 377 (485)
Q Consensus 335 G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l~~~~~~ 377 (485)
|||..++ ..+|||||+|+|.+|+.|+++|+++|++|+.+...
T Consensus 318 G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~~~~ 359 (365)
T PRK14290 318 GMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFDIKEN 359 (365)
T ss_pred CCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhhhc
Confidence 9997654 36899999999999999999999999999876644
No 30
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.6e-63 Score=496.81 Aligned_cols=313 Identities=36% Similarity=0.644 Sum_probs=264.2
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCC
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS 121 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~ 121 (485)
.++.||+||||+++||++|||+|||+||++||||+|++ +.++|++|++||||||||+||++||+||+++++.++++++
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g 79 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGG 79 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCC
Confidence 46799999999999999999999999999999999965 8899999999999999999999999999999976554322
Q ss_pred CCCCCCCchhhhhhhcCCCCCCCCCCCCCCCccc------------ccCC----CCCcccccccCCCCCCCCCCcccCCC
Q 011450 122 NTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINF------------NFGN----KGNFGLDIRCGGTGAKSSNCIQSCKA 185 (485)
Q Consensus 122 ~~~~~~dp~d~f~~fFgg~~g~fg~~g~~~g~~~------------~~~~----~~~~~~di~C~GtG~~~~~~~~~C~~ 185 (485)
.+ . |++||+. |++++.+...+-+. .... -.....+-.|.|.|.+++... .|+.
T Consensus 80 ~~-------~-f~~~F~~--g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~-~C~~ 148 (337)
T KOG0712|consen 80 FG-------G-FSQFFGF--GGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAP-KCTT 148 (337)
T ss_pred Cc-------c-HHHhccC--CCcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCC-CCCC
Confidence 11 1 8888861 22221110000000 0000 001122333999998877654 8999
Q ss_pred CCCCCeeeeeeecCCceeeeE-eecccCCCCcEEE--eecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCC
Q 011450 186 CWGRGGVLKTQRTPFGLISQV-STCSKCGGDGKII--IDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDR 262 (485)
Q Consensus 186 C~G~G~~~~~~~~~~g~~~~~-~~C~~C~G~G~~i--~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~ 262 (485)
|.|+|..+...+..+|+.++. ..|..|+|+|.++ .+.|+.|.|.+++.+.+.++|.|++|+.++++|.+.|++++..
T Consensus 149 C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~ 228 (337)
T KOG0712|consen 149 CRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAP 228 (337)
T ss_pred CCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecC
Confidence 999999999999999888765 6999999999984 4569999999999999999999999999999999999999864
Q ss_pred CCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCe-EEEEeCCC--CCCCCEEEEcCCCCCCC
Q 011450 263 RRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSG--VQPGDTVKLQQMGVPDI 339 (485)
Q Consensus 263 ~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~-~~l~Ip~g--~q~G~~irl~g~G~P~~ 339 (485)
+..|||++|.|..++|+.|.|+|+||++..+|+|.||++|+...+.|+||+ +.+.++|| +.||++++|.|+|||..
T Consensus 229 -g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~ 307 (337)
T KOG0712|consen 229 -GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIF 307 (337)
T ss_pred -CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccc
Confidence 566999999999999999999999999999999999999999999999997 68888888 89999999999999999
Q ss_pred CCCCCCccEEEEEEEEcCCCCChhHHHHHHHH
Q 011450 340 NNPSVRGDHLFIVNVLIPKDISDPERALVEEI 371 (485)
Q Consensus 340 ~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l 371 (485)
+++ +|||||+|+|+||+ +++++...|+++
T Consensus 308 ~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~ 336 (337)
T KOG0712|consen 308 RNP--KGDLYIKFEVKFPK-LSPSQLKMLEDL 336 (337)
T ss_pred cCC--CCcEEEEEEEEcCC-CChHHHHHHHhh
Confidence 885 99999999999999 999998888775
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.5e-55 Score=439.45 Aligned_cols=275 Identities=36% Similarity=0.630 Sum_probs=213.8
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCC---
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG--- 119 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~--- 119 (485)
.+|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+||++|+.||+||++++..+..+
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~ 82 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence 57999999999999999999999999999999999888899999999999999999999999999999865432110
Q ss_pred --CCCCC-CC---CCchhhhhhhcCCCCCCCCCCCCCCCccccc-CCCCCcccccccCCCCCCCCCCcccCCCCCCCCee
Q 011450 120 --LSNTS-QG---VDPFELYSAFFGGSDGLFGGVGEAGGINFNF-GNKGNFGLDIRCGGTGAKSSNCIQSCKACWGRGGV 192 (485)
Q Consensus 120 --~~~~~-~~---~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~~-~~~~~~~~di~C~GtG~~~~~~~~~C~~C~G~G~~ 192 (485)
++.+. .+ .++.|+|+.|||+. +++++ .+. .+.. .....++.|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~d~f~~~fgg~-~~~~~---~g~-~~~~~~~~~~~g~dl~------------------------ 133 (291)
T PRK14299 83 GPPGGGDFSGFNVGDFSDFFQQLFGGR-GGFGG---FGD-LFGSVGRRARKGRDLE------------------------ 133 (291)
T ss_pred CCCCCCCccccCcCCHHHHHHHHhCCC-CCCCC---ccc-ccccccCCCCCCCCEE------------------------
Confidence 00010 01 24557888888642 11111 000 0000 00000111111
Q ss_pred eeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCCCCCCCccEEE
Q 011450 193 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFV 272 (485)
Q Consensus 193 ~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v 272 (485)
+. . ..+.-..+.|.-+.+.. ..++++|.||||+++|++|+++|+|+.. |||+|
T Consensus 134 ~~-l--------~isL~ea~~G~~~~i~l------------~g~~~~V~Ip~G~~~G~~ir~~g~G~~~------GDL~v 186 (291)
T PRK14299 134 AE-L--------PLTLEEAYRGGEKVVEV------------AGERLSVRIPPGVREGQVIRLAGKGRQG------GDLYL 186 (291)
T ss_pred EE-E--------EecHHHHhCCCeEEEee------------CCEEEEEecCCCcCCCcEEEECCCCCCC------CCEEE
Confidence 00 0 12223344444333321 2367999999999999999999999863 99999
Q ss_pred EEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEE
Q 011450 273 ALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIV 352 (485)
Q Consensus 273 ~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~ 352 (485)
+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||.++|+||+++++|++++|+|+|||.. ++.+|||||+|
T Consensus 187 ~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~g~~~rl~g~G~p~~--~~~~GDL~v~~ 264 (291)
T PRK14299 187 VVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGRKLRLKGKGWPRG--PAGRGDQYAEV 264 (291)
T ss_pred EEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCCCCEEEECCCCCCCC--CCCCCCEEEEE
Confidence 9999999999999999999999999999999999999999998999999999999999999999963 34689999999
Q ss_pred EEEcCCCCChhHHHHHHHHHhhc
Q 011450 353 NVLIPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 353 ~V~~P~~ls~~q~~ll~~l~~~~ 375 (485)
+|.+|+.|+++|+++|++|+++.
T Consensus 265 ~V~~P~~l~~~~~~~l~~l~~~~ 287 (291)
T PRK14299 265 RITIPTRPTPEEERLYKQLAELY 287 (291)
T ss_pred EEECCCCCCHHHHHHHHHHHhhh
Confidence 99999999999999999998764
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=5e-54 Score=436.39 Aligned_cols=285 Identities=28% Similarity=0.464 Sum_probs=225.2
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccC----cCcccC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG----ITGEYD 118 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~----~~~~~~ 118 (485)
.+|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|+.||+||+.. +.+..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~ 82 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ 82 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccccc
Confidence 3799999999999999999999999999999999988889999999999999999999999999998642 221111
Q ss_pred CCCCCCC-CCCchhhhhhhcCCCCCCCCCCCCCCCcccccCCCCCcccccccCCCCCCCCCCcccCCCCCCCCeeeeeee
Q 011450 119 GLSNTSQ-GVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRCGGTGAKSSNCIQSCKACWGRGGVLKTQR 197 (485)
Q Consensus 119 ~~~~~~~-~~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~~~~~~~~~~di~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~ 197 (485)
.+++... ..++.++|+.|||+. ++.. ......++.|+. +.
T Consensus 83 ~~~~~~~~~~~~~~~f~~~~g~~----~~~~--------~~~~~~kg~di~------------------------~~--- 123 (306)
T PRK10266 83 HGDGQSFNAEDFDDIFSSIFGQH----ARQS--------RQRPAARGHDIE------------------------IE--- 123 (306)
T ss_pred cCCCCCCCCCCHHHHHHHHhCCC----CCCC--------CCCCCCCCCceE------------------------EE---
Confidence 0011011 124568888888631 1000 000011122221 00
Q ss_pred cCCceeeeEeecccCCCCcEEEeecccccCCCceee--eceEEEEEcCCCCCCCCEEEEccccCCCCCCCCCccEEEEEE
Q 011450 198 TPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQ--SKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALH 275 (485)
Q Consensus 198 ~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~--~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~ 275 (485)
...+.-..+.|..+.+......|.|.|.+. ..++++|.||+|+++|++|+++|+|++..++..+|||+|+|+
T Consensus 124 ------v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~ 197 (306)
T PRK10266 124 ------VAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIH 197 (306)
T ss_pred ------EEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEE
Confidence 012333455555555544445566666443 236899999999999999999999999877788999999999
Q ss_pred eeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEE
Q 011450 276 VDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVL 355 (485)
Q Consensus 276 v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~ 355 (485)
++||+.|+|+|+||+++++|||.+|++|+++.|+|++|++.|+||+++++|++++|+|+|||..+ .+|||||+|+|.
T Consensus 198 v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~ri~g~G~p~~~---~~GdL~v~~~v~ 274 (306)
T PRK10266 198 IAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKK---QTGDLYAVLKIV 274 (306)
T ss_pred EcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEEECCCCCCCCC---CCCCEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999642 589999999999
Q ss_pred cCCCCChhHHHHHHHHHhhc
Q 011450 356 IPKDISDPERALVEEIAFLK 375 (485)
Q Consensus 356 ~P~~ls~~q~~ll~~l~~~~ 375 (485)
+|+.|+++|+++|++|+.+.
T Consensus 275 ~P~~l~~~q~~l~~~l~~~~ 294 (306)
T PRK10266 275 MPPKPDEKTAALWQQLADAQ 294 (306)
T ss_pred CCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999998764
No 33
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=6.8e-40 Score=353.57 Aligned_cols=143 Identities=17% Similarity=0.156 Sum_probs=122.7
Q ss_pred ccCCCCcEEEeecccc--cCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCCCCCCCccEEEEEEeecccccccccc
Q 011450 210 SKCGGDGKIIIDHCRR--CGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGL 287 (485)
Q Consensus 210 ~~C~G~G~~i~~~C~~--C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~ 287 (485)
..+.|.-+.++..-.. |.|...+++.++++|.||||+++|++|+|+|+|+.+. ++ +|||||+|++++|+.|+|+|+
T Consensus 669 eLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegp-gg-~GDLyVvIkVKPHp~FrRdGd 746 (871)
T TIGR03835 669 LFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFG-NG-CGDLKVVFKVIPSNFFQIKND 746 (871)
T ss_pred HHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCC-CC-CCCEEEEEEEcCCCCeEEECC
Confidence 4566666666432222 3333456677899999999999999999999999864 33 499999999999999999999
Q ss_pred ceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEc
Q 011450 288 NLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLI 356 (485)
Q Consensus 288 DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~ 356 (485)
||+++++|+|.+||+|+++.|+|+||++.|+||+|+++|++++|+|+|||..+ +.+|||||+|+|.-
T Consensus 747 DL~~~v~ISL~EALLGgtIeIpTLDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~ 813 (871)
T TIGR03835 747 GLHVAALVDPLVAYNGGIIDVFGPNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSS 813 (871)
T ss_pred eEEEEEecCHHHHhcCCEEEeeCCCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEee
Confidence 99999999999999999999999999989999999999999999999999532 46899999999974
No 34
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-41 Score=336.83 Aligned_cols=291 Identities=32% Similarity=0.487 Sum_probs=217.7
Q ss_pred ccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCC
Q 011450 41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG 119 (485)
Q Consensus 41 ~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~ 119 (485)
...+|||++|||+++||..|||+||||||+|||||+|+ +|.|.++|++|+.||||||||++|+.||+||++++...+..
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~ 92 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKD 92 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccccc
Confidence 45799999999999999999999999999999999999 58999999999999999999999999999999999864321
Q ss_pred CCCCCCCCCchhhhhhhcCCCCCCCCCCCCCCCcccccCCCCCcccccc--------------------cCCCCCCC-CC
Q 011450 120 LSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIR--------------------CGGTGAKS-SN 178 (485)
Q Consensus 120 ~~~~~~~~dp~d~f~~fFgg~~g~fg~~g~~~g~~~~~~~~~~~~~di~--------------------C~GtG~~~-~~ 178 (485)
+.++..+ .++|+.||+..+..+++.. .... ..++.++. +.|-.... ++
T Consensus 93 ~~~g~~~---~~~f~~~f~dfg~~~~g~~-------~~e~-~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~ 161 (336)
T KOG0713|consen 93 GEGGGGG---NDIFSAFFGDFGVTVGGNP-------LEEA-LPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGT 161 (336)
T ss_pred cccCCcc---cchHHHhhcccccccCCCc-------ccCC-CCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcc
Confidence 1111111 6778888865432222210 0000 11222221 11111000 00
Q ss_pred CcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe-ecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccc
Q 011450 179 CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII-DHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGE 257 (485)
Q Consensus 179 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~-~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~ 257 (485)
. .|+-.- .+ ..+..|.|....+. ..|..|.+.+...+...+++.+..|+.+|....+..+
T Consensus 162 ~-----~~~~~~-~~-------------~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~ 222 (336)
T KOG0713|consen 162 R-----KCNCRL-EM-------------FTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELE 222 (336)
T ss_pred c-----ccCChh-hh-------------eeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeecc
Confidence 0 111110 11 12233333333322 2377777777778899999999999999999999999
Q ss_pred cCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCe-EEEEeCCCCCCCCEEEEcCCCC
Q 011450 258 GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGV 336 (485)
Q Consensus 258 Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~-~~l~Ip~g~q~G~~irl~g~G~ 336 (485)
|.+.. -+.+||+.+.+..-+|+.|.|+++|+++++.|++.+++.|..+++.++|+. +.++--.++.|+..++..++||
T Consensus 223 ~~~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~ 301 (336)
T KOG0713|consen 223 GEPHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGM 301 (336)
T ss_pred CCcce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccc
Confidence 98754 478999999999999999999999999999999999999999999999997 3455556788999999999999
Q ss_pred CCCCCCCCCccEEEEEEEEcCCC-CCh
Q 011450 337 PDINNPSVRGDHLFIVNVLIPKD-ISD 362 (485)
Q Consensus 337 P~~~~~~~rGDL~V~~~V~~P~~-ls~ 362 (485)
|........|+++++|.+.+|.. ++.
T Consensus 302 ~~l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 302 PLLKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred hhhhccchhcceeEEecccCcccccch
Confidence 98877778999999999999965 554
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-38 Score=319.27 Aligned_cols=234 Identities=41% Similarity=0.722 Sum_probs=190.6
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCCCCCC
Q 011450 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTS 124 (485)
Q Consensus 45 d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~~~~~ 124 (485)
|||+||||+++|++.|||+||++||++||||.|.+++|+++|++|.+|||+|+|++||++||++|..+. + +
T Consensus 44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~---~------~ 114 (288)
T KOG0715|consen 44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH---G------E 114 (288)
T ss_pred chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc---c------c
Confidence 999999999999999999999999999999999999999999999999999999999999999998751 1 1
Q ss_pred CCCCchhhhhhhcCC-CCCCCCCC-CCC-CCcccccCCCC-Cc-------ccccccCCCCCCCCCCcccCCCCCCCCeee
Q 011450 125 QGVDPFELYSAFFGG-SDGLFGGV-GEA-GGINFNFGNKG-NF-------GLDIRCGGTGAKSSNCIQSCKACWGRGGVL 193 (485)
Q Consensus 125 ~~~dp~d~f~~fFgg-~~g~fg~~-g~~-~g~~~~~~~~~-~~-------~~di~C~GtG~~~~~~~~~C~~C~G~G~~~ 193 (485)
.+.||+++|..+|++ +.....+. ... -...+...... .+ ..+..|.|.|+..+.....|..|.|.|.+.
T Consensus 115 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (288)
T KOG0715|consen 115 FGGNPFDVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSGRGLVS 194 (288)
T ss_pred ccCCccchHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchhhhCccccc
Confidence 123789999999976 21111100 000 00001000000 01 122239999999999999999999999776
Q ss_pred eeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCCCCCCCccEEEE
Q 011450 194 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVA 273 (485)
Q Consensus 194 ~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~ 273 (485)
...+.+|.+. +|..|+|.|.+....|..|.|.|.+...+.+.|.+|+|+.++.+|++.+.|.. ||+|.
T Consensus 195 ~~~~~~f~~~----~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~--------~l~v~ 262 (288)
T KOG0715|consen 195 NPKEDPFILY----TCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND--------DLFVR 262 (288)
T ss_pred ccccCCccee----ecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc--------eEEEE
Confidence 6555555432 89999999999999999999999999999999999999999999999999764 99999
Q ss_pred EEeeccccccccccceEEEEEecchh
Q 011450 274 LHVDEKQGIHRDGLNLFSKISVDYTE 299 (485)
Q Consensus 274 I~v~~h~~F~R~G~DL~~~~~Isl~e 299 (485)
+.|.+++.|+|+|.|+++++.|++.|
T Consensus 263 ~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 263 LIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred EEeccCcccccccCcccccccccccC
Confidence 99999999999999999999999865
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=7.1e-22 Score=195.93 Aligned_cols=289 Identities=29% Similarity=0.379 Sum_probs=182.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL 120 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~--~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~ 120 (485)
..|||++|+|.++|+.+||++||++||++||||+|+.+ .++++|++|++||++|+|+.+|..||+||++++.+.....
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~ 81 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS 81 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence 57999999999999999999999999999999999876 6667899999999999999999999999997766521111
Q ss_pred CC--C----CCCCCchhhhhhhcCCCCCCCCC-CC--CCCCcccccCCCCCcccccccCCCCCCCCCCcccCCCCCCCCe
Q 011450 121 SN--T----SQGVDPFELYSAFFGGSDGLFGG-VG--EAGGINFNFGNKGNFGLDIRCGGTGAKSSNCIQSCKACWGRGG 191 (485)
Q Consensus 121 ~~--~----~~~~dp~d~f~~fFgg~~g~fg~-~g--~~~g~~~~~~~~~~~~~di~C~GtG~~~~~~~~~C~~C~G~G~ 191 (485)
.. . ....++.+.|..|||........ .+ +.... .........+....+.... ......+..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 157 (306)
T KOG0714|consen 82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAA-PGEEAFKSEGKAFQSLYGP---KRKQYDSSGSDRSAR 157 (306)
T ss_pred CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccc-cCccccccccccccccCCC---ccccccccccccccc
Confidence 10 1 11235677888888743211110 00 00000 0000000000000000000 000000000000000
Q ss_pred eeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceeeeceEEEEEcCCCCCCCCEEEEccccCCCCCCCCCccEE
Q 011450 192 VLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLF 271 (485)
Q Consensus 192 ~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~ 271 (485)
........ ........+..|.-..++.........-. .......+.+.+.+++..|..+....+|+.... ..|-+++
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~ 234 (306)
T KOG0714|consen 158 QSPPVEHP-LRVSLEDLYKGESKKMKISRQSFTSNGRE-GSSRSRYLSISIKPGWKEGTKITFPEEGDEEPG-ILPADIE 234 (306)
T ss_pred CCCCccCC-cceeHHHhccccceeeecccccccCCccc-ccCccceeEEeccCCcccccceeccccccccCC-cCcceeE
Confidence 00000000 00000112333333333322211111111 235678899999999999999999999987543 7899999
Q ss_pred EEEEeeccccccccccceEEE--EEecchhhccCceEEEEccCCe-EEEEeC-CCCCCCCEEEEcCCCCCC
Q 011450 272 VALHVDEKQGIHRDGLNLFSK--ISVDYTEAILGTSMEVETVEGM-KDLRIP-SGVQPGDTVKLQQMGVPD 338 (485)
Q Consensus 272 v~I~v~~h~~F~R~G~DL~~~--~~Isl~eAllG~~i~V~tldG~-~~l~Ip-~g~q~G~~irl~g~G~P~ 338 (485)
+.+..++|+.|.|.+.||... ..|++.+|++|....++++++. ..+.+. .-+.++...+++++|+|.
T Consensus 235 f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 235 FVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred EEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence 999999999999999999999 9999999999999999999886 334444 457899999999999985
No 37
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.82 E-value=2.6e-20 Score=153.63 Aligned_cols=80 Identities=30% Similarity=0.656 Sum_probs=70.5
Q ss_pred ceEEEEEecchhhccCceEEEEccCC-eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHH
Q 011450 288 NLFSKISVDYTEAILGTSMEVETVEG-MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERA 366 (485)
Q Consensus 288 DL~~~~~Isl~eAllG~~i~V~tldG-~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ 366 (485)
||+++++||++||++|+++.|+|++| .++|+||+++++|++++|+|+|||...+++.+|||||+|+|.+|++||++|++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~ 80 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE 80 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence 89999999999999999999999999 68999999999999999999999998876689999999999999999999987
Q ss_pred H
Q 011450 367 L 367 (485)
Q Consensus 367 l 367 (485)
|
T Consensus 81 l 81 (81)
T PF01556_consen 81 L 81 (81)
T ss_dssp H
T ss_pred C
Confidence 6
No 38
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.78 E-value=2.1e-19 Score=199.28 Aligned_cols=76 Identities=38% Similarity=0.635 Sum_probs=71.1
Q ss_pred ccccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcC
Q 011450 39 IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT 114 (485)
Q Consensus 39 ~~~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~ 114 (485)
.+..+++||++|||+++||..|||+|||+||++||||+|+++.|.++|++|++||+|||||.+|+.||+||.+++.
T Consensus 568 ~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 568 IEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 3346799999999999999999999999999999999998778899999999999999999999999999998765
No 39
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=1.4e-19 Score=176.47 Aligned_cols=72 Identities=54% Similarity=0.885 Sum_probs=69.0
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhccccccchhccccccCcC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT 114 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~ 114 (485)
..|+|+|||++++|+.++||||||+||++||||++++ |++.++|++||+||+||+||.||..||+||+.++.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~ 102 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK 102 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence 6899999999999999999999999999999999986 88999999999999999999999999999988764
No 40
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=4.5e-19 Score=177.93 Aligned_cols=90 Identities=46% Similarity=0.744 Sum_probs=79.8
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL 120 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~-~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~ 120 (485)
...|||++|||+.+||..||++|||+.|++||||+|| +|.|.++|+++.+||+||+|+.+|+.||++|..+....
T Consensus 3 ~~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~---- 78 (296)
T KOG0691|consen 3 KDTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ---- 78 (296)
T ss_pred ccchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch----
Confidence 3789999999999999999999999999999999999 58899999999999999999999999999998765432
Q ss_pred CCCCCCCCchhhhhhhcCC
Q 011450 121 SNTSQGVDPFELYSAFFGG 139 (485)
Q Consensus 121 ~~~~~~~dp~d~f~~fFgg 139 (485)
.-.++.+.|...|++
T Consensus 79 ----~~~d~~~~~r~~f~~ 93 (296)
T KOG0691|consen 79 ----GREDQADGFRKKFGS 93 (296)
T ss_pred ----hhhhHHHHHHHHhhh
Confidence 124778888888854
No 41
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.2e-18 Score=179.85 Aligned_cols=72 Identities=50% Similarity=0.899 Sum_probs=68.2
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----cHHHHHHHHHHHHhhhccccccchhccccccCcC
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT 114 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~----~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~ 114 (485)
+.|||.+|||+++||.+|||+|||++++-||||+..++ .|+++|+.|.+||||||||.+|++||.||+.|++
T Consensus 8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 46999999999999999999999999999999998753 5899999999999999999999999999999998
No 42
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=3.2e-17 Score=155.20 Aligned_cols=70 Identities=59% Similarity=0.882 Sum_probs=64.9
Q ss_pred cccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHHHHhhhccccccchhcccc
Q 011450 40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--AEEKFKEISSAYEVLSDDEKRSVYDRFG 109 (485)
Q Consensus 40 ~~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~--a~e~F~~I~~AYevLsDp~kR~~YD~~G 109 (485)
+....|||+||||+++|+.+||++|||++|++||||+|+... ++++|++|++||++|+|+.+|+.||+++
T Consensus 2 ~~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 2 MSDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred chhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 345689999999999999999999999999999999998543 8999999999999999999999999984
No 43
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.69 E-value=1.5e-17 Score=130.42 Aligned_cols=62 Identities=48% Similarity=0.817 Sum_probs=59.2
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHHHHhhhccccccchhc
Q 011450 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--AEEKFKEISSAYEVLSDDEKRSVYD 106 (485)
Q Consensus 45 d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~--a~e~F~~I~~AYevLsDp~kR~~YD 106 (485)
|||+||||+++|+.+|||+||+++++++|||++.... +++.|+.|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999987655 8899999999999999999999998
No 44
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=1.3e-17 Score=172.27 Aligned_cols=75 Identities=44% Similarity=0.677 Sum_probs=69.0
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ccHHHHHHHHHHHHhhhccccccchhccccccCcCcc
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE 116 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~--~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~ 116 (485)
+.+.||+||||.++|+..|||++||+||++||||+||+ .+|+++|+.|+.||+|||||..|+-||.+-+.-|.+.
T Consensus 6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~ 82 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGK 82 (508)
T ss_pred hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCC
Confidence 45899999999999999999999999999999999986 5789999999999999999999999999888666544
No 45
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.68 E-value=4.6e-17 Score=163.52 Aligned_cols=77 Identities=48% Similarity=0.724 Sum_probs=69.3
Q ss_pred cccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC----ccHHHHHHHHHHHHhhhccccccchhccccccCcCc
Q 011450 40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS----PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG 115 (485)
Q Consensus 40 ~~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~----~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~ 115 (485)
.+..+|||+||||.++|+..||.||||+||.|||||...+ +.|+++|-.|..|-|||+||+||++||+ |++.+..
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD~ 468 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLDP 468 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCCh
Confidence 4567999999999999999999999999999999998765 3589999999999999999999999998 7777765
Q ss_pred cc
Q 011450 116 EY 117 (485)
Q Consensus 116 ~~ 117 (485)
..
T Consensus 469 Es 470 (504)
T KOG0624|consen 469 ES 470 (504)
T ss_pred hh
Confidence 43
No 46
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=4.9e-17 Score=155.28 Aligned_cols=70 Identities=46% Similarity=0.750 Sum_probs=65.0
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC---ccHHHHHHHHHHHHhhhccccccchhcccccc
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS---PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA 111 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~---~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~ 111 (485)
..+|+|+||||.++|+..||++|||+||++||||+++. .+|.++|+.++.||.||+|.++|+.||+.|.-
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i 84 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI 84 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence 34699999999999999999999999999999999963 57899999999999999999999999998864
No 47
>PHA03102 Small T antigen; Reviewed
Probab=99.65 E-value=1.6e-16 Score=145.53 Aligned_cols=85 Identities=24% Similarity=0.323 Sum_probs=72.6
Q ss_pred CCCcchhccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcCcccCCC
Q 011450 43 GTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL 120 (485)
Q Consensus 43 ~~d~Y~iLgv~~~A--s~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~~~~~ 120 (485)
...+|++|||+++| |.+|||+|||++|+++|||+++ ..++|++|++||++|+|+.+|..||.+|+......
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg---~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~---- 76 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG---DEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE---- 76 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc---hhHHHHHHHHHHHHHhhHHHhccccccCCcccccc----
Confidence 35789999999999 9999999999999999999984 45799999999999999999999999998754321
Q ss_pred CCCCCCCCchhhhhhhcCC
Q 011450 121 SNTSQGVDPFELYSAFFGG 139 (485)
Q Consensus 121 ~~~~~~~dp~d~f~~fFgg 139 (485)
...|.++|.+.||+
T Consensus 77 -----~~~~~~~f~~~fg~ 90 (153)
T PHA03102 77 -----EDVPSGYVGATFGD 90 (153)
T ss_pred -----cccHHHHhhhhcCC
Confidence 12378888888854
No 48
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.60 E-value=1e-15 Score=118.25 Aligned_cols=58 Identities=67% Similarity=0.969 Sum_probs=54.3
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCC--CccHHHHHHHHHHHHhhhccccc
Q 011450 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK--SPGAEEKFKEISSAYEVLSDDEK 101 (485)
Q Consensus 44 ~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~--~~~a~e~F~~I~~AYevLsDp~k 101 (485)
+|||++|||+++++.++||+||++|++++|||++. .+.+.+.|++|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 48999999999999999999999999999999998 56788999999999999999853
No 49
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.57 E-value=3.5e-15 Score=113.07 Aligned_cols=54 Identities=67% Similarity=0.987 Sum_probs=51.5
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhcc
Q 011450 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSD 98 (485)
Q Consensus 45 d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsD 98 (485)
|||++|||+++++.++||++||+|+++||||++.. +.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 79999999999999999999999999999999976 6789999999999999986
No 50
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=3e-15 Score=141.98 Aligned_cols=71 Identities=37% Similarity=0.677 Sum_probs=66.0
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHHHHhhhccccccchhccccccC
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG 112 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~-~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~ 112 (485)
...|+|+||||+++||.+|||+|||+|.+|||||++++ .+.++.|.+|++||+.|+|+..|+.|..||+..
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD 168 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD 168 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence 46799999999999999999999999999999999987 567778889999999999999999999999753
No 51
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=9e-15 Score=150.05 Aligned_cols=92 Identities=41% Similarity=0.694 Sum_probs=77.2
Q ss_pred ccccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ccHHHHHHHHHHHHhhhccccccchhccccccCcCcc
Q 011450 39 IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE 116 (485)
Q Consensus 39 ~~~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~--~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~~~ 116 (485)
-++..+|||.|||+.++|+..|||+|||++|+.||||+|.. .+++.+|++|-+||.+|+||.+|..||. |.+ +...
T Consensus 368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds-g~d-le~~ 445 (486)
T KOG0550|consen 368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS-GQD-LEEV 445 (486)
T ss_pred HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc-ccc-hhhh
Confidence 45678999999999999999999999999999999999963 5789999999999999999999999997 222 1111
Q ss_pred cCCCCCCCCCCCchhhhhhh
Q 011450 117 YDGLSNTSQGVDPFELYSAF 136 (485)
Q Consensus 117 ~~~~~~~~~~~dp~d~f~~f 136 (485)
+.++.++||+++|..|
T Consensus 446 ----~~~~a~~dp~~~~~a~ 461 (486)
T KOG0550|consen 446 ----GSGGAGFDPFNIFRAF 461 (486)
T ss_pred ----cCCCcCcChhhhhhhc
Confidence 1122578999999887
No 52
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=6.9e-14 Score=135.17 Aligned_cols=68 Identities=40% Similarity=0.710 Sum_probs=64.4
Q ss_pred ccCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccc
Q 011450 41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRF 108 (485)
Q Consensus 41 ~~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~ 108 (485)
....|.|++|||.++|+..||++|||+||++||||+++++++.+.|+.|..|||+|.|.+.|..||-+
T Consensus 30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydya 97 (329)
T KOG0722|consen 30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYA 97 (329)
T ss_pred ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999953
No 53
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.39 E-value=3.7e-13 Score=126.23 Aligned_cols=64 Identities=27% Similarity=0.444 Sum_probs=57.2
Q ss_pred CCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHHHHHhhhccccccchhcc
Q 011450 44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR 107 (485)
Q Consensus 44 ~d~Y~iLgv~~~--As~~eIk~AYr~la~k~HPD~n~~~------~a~e~F~~I~~AYevLsDp~kR~~YD~ 107 (485)
.|||++|||++. ++..+|+++||+|++++|||+.... .+.++|+.|++||++|+||.+|+.|+-
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999996 7889999999999999999997532 256789999999999999999999984
No 54
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.37 E-value=4.6e-13 Score=124.93 Aligned_cols=64 Identities=30% Similarity=0.450 Sum_probs=56.6
Q ss_pred CCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHHHHHhhhccccccchhcc
Q 011450 44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVYDR 107 (485)
Q Consensus 44 ~d~Y~iLgv~~~--As~~eIk~AYr~la~k~HPD~n~~~~----a~e~F~~I~~AYevLsDp~kR~~YD~ 107 (485)
.|||++|||++. ++..+|+++||+|++++|||++.+.. +.+.+..|++||++|+||.+|+.|+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL 71 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML 71 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 589999999997 78999999999999999999986422 33457899999999999999999985
No 55
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=5.6e-13 Score=138.27 Aligned_cols=65 Identities=42% Similarity=0.600 Sum_probs=63.7
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhcc
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDR 107 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~ 107 (485)
.+|.|.+|||++++|.++|||.||++|+-.|||+|..+.|+|.|+.++.|||+|+|+++|..||.
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~ 298 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDL 298 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999997
No 56
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.34 E-value=1.3e-12 Score=122.52 Aligned_cols=66 Identities=26% Similarity=0.411 Sum_probs=59.2
Q ss_pred cCCCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHHHHHhhhccccccchhcc
Q 011450 42 AGTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR 107 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~--As~~eIk~AYr~la~k~HPD~n~~~------~a~e~F~~I~~AYevLsDp~kR~~YD~ 107 (485)
+..|||++|||++. .+..+|+++||+|+++||||++... .+.++|..||+||++|+||.+|+.|+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 56899999999999 6789999999999999999998642 256789999999999999999999994
No 57
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.30 E-value=3e-12 Score=120.55 Aligned_cols=65 Identities=23% Similarity=0.310 Sum_probs=56.8
Q ss_pred CCCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCC-cc-----HHHHHHHHHHHHhhhccccccchhcc
Q 011450 43 GTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKS-PG-----AEEKFKEISSAYEVLSDDEKRSVYDR 107 (485)
Q Consensus 43 ~~d~Y~iLgv~~~--As~~eIk~AYr~la~k~HPD~n~~-~~-----a~e~F~~I~~AYevLsDp~kR~~YD~ 107 (485)
..|||++|||++. ++..+|+++||+|++++|||++.. +. +.+.++.||+||++|+||.+|+.|+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 4799999999996 689999999999999999999863 22 33446899999999999999999994
No 58
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=99.27 E-value=8.3e-12 Score=99.12 Aligned_cols=63 Identities=48% Similarity=0.988 Sum_probs=53.0
Q ss_pred ccCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEE-eecccccCCCc
Q 011450 168 RCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII-IDHCRRCGGNG 230 (485)
Q Consensus 168 ~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i-~~~C~~C~G~G 230 (485)
.|+|+|++++..+.+|+.|+|+|.++..++.+++.+++.++|+.|+|+|++| .++|+.|+|+|
T Consensus 3 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g 66 (66)
T PF00684_consen 3 KCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG 66 (66)
T ss_dssp CCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred cCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence 3999999999999999999999999998888888888899999999999999 88999999976
No 59
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=9.8e-12 Score=128.23 Aligned_cols=117 Identities=26% Similarity=0.480 Sum_probs=84.8
Q ss_pred CcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEee----------cccccCCCceeeeceEEEEEcCCCCCC
Q 011450 179 CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------HCRRCGGNGEVQSKRSMKVVIPPGVSN 248 (485)
Q Consensus 179 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~----------~C~~C~G~G~v~~~k~l~V~IP~Gv~d 248 (485)
...+|++|+|+|..-.+ ...+|++|+|+|.+... .|++|+|+|.+. .=|-....
T Consensus 141 ~~~~C~~C~GsGak~gt---------~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i-------~~pC~~C~ 204 (371)
T COG0484 141 RSVTCSTCHGSGAKPGT---------DPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKII-------KDPCGKCK 204 (371)
T ss_pred eeeECCcCCCCCCCCCC---------CCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeEC-------CCCCCCCC
Confidence 45689999999976432 14689999999976443 399999999652 22444333
Q ss_pred CCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCE
Q 011450 249 GATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDT 328 (485)
Q Consensus 249 G~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~ 328 (485)
|.-..-. .-.++|+||+|+..|++
T Consensus 205 G~G~v~~--------------------------------------------------------~~~i~V~IPaGv~~g~~ 228 (371)
T COG0484 205 GKGRVKK--------------------------------------------------------KKSISVNIPAGVDDGDR 228 (371)
T ss_pred CCCeEee--------------------------------------------------------eeEEEEECCCCCccCCE
Confidence 3211100 01378999999999999
Q ss_pred EEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHH
Q 011450 329 VKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALV 368 (485)
Q Consensus 329 irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll 368 (485)
|++.|+|-...++ +..|||||+|.|.-.+.|..+..+|+
T Consensus 229 ir~~g~G~~g~~G-gp~GDLyv~i~v~~h~~F~R~g~dL~ 267 (371)
T COG0484 229 IRLSGEGEAGPNG-GPAGDLYVFVHVKPHPIFERDGDDLY 267 (371)
T ss_pred EEEecCcccCCCC-CCCccEEEEEEeecCCCeEECCCceE
Confidence 9999999988654 56899999999999887766655543
No 60
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.23 E-value=8.5e-12 Score=109.10 Aligned_cols=52 Identities=23% Similarity=0.410 Sum_probs=47.8
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhc
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS 97 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLs 97 (485)
..++|++|||+++||.+|||+|||+|++++|||++ ++.+.|++|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---Gs~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNG---GSTYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHh
Confidence 36999999999999999999999999999999986 45678999999999984
No 61
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.23 E-value=2.7e-11 Score=127.37 Aligned_cols=54 Identities=22% Similarity=0.382 Sum_probs=47.6
Q ss_pred EEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHH
Q 011450 315 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVE 369 (485)
Q Consensus 315 ~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~ 369 (485)
++|.||+|+++|++++|+|+|+|...+ ..+|||||+|+|..|+.+..++.+|+.
T Consensus 229 ~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~~GDL~v~v~v~~~~~f~r~g~DL~~ 282 (386)
T PRK14289 229 ITVKIPAGVAEGMQLSMNGKGNAGKHG-GVNGDLLVVIEEEPHPELIRDENDLIY 282 (386)
T ss_pred EEEEeCCCCCCCCEEEEeccccCCCCC-CCCccEEEEEEEecCCcccccccceeE
Confidence 689999999999999999999986543 468999999999999999988877754
No 62
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.22 E-value=2.7e-11 Score=126.86 Aligned_cols=56 Identities=20% Similarity=0.338 Sum_probs=48.5
Q ss_pred EEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHH
Q 011450 315 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEI 371 (485)
Q Consensus 315 ~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l 371 (485)
++|.||+|+++|++++|+|+|+|...+ ..+|||||+|+|..|+.++.++.+|+..+
T Consensus 218 ~~V~IppG~~~G~~i~l~g~G~~~~~~-~~~GDL~v~v~v~~~~~f~r~g~DL~~~~ 273 (374)
T PRK14293 218 LKINIPAGVDTGTRLRVSGEGDAGLRG-GPPGDLYVYLFVKNDPEFRRDGINILSEI 273 (374)
T ss_pred EEEEeCCCCCCCCEEEEccCccCCCCC-CCCcCEEEEEEEeCCCccChhhhceEEEe
Confidence 689999999999999999999986543 45799999999999999999988775443
No 63
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.18 E-value=1.6e-11 Score=122.94 Aligned_cols=57 Identities=40% Similarity=0.531 Sum_probs=51.5
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--------ccHHHHHHHHHHHHhhhcc
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--------PGAEEKFKEISSAYEVLSD 98 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~--------~~a~e~F~~I~~AYevLsD 98 (485)
...|+|++|||+++||.+|||+|||+|+++||||++.. +.++++|++|++||++|+.
T Consensus 198 ~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 198 TLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred cHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 44799999999999999999999999999999999742 3478999999999999975
No 64
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.18 E-value=4.7e-11 Score=124.65 Aligned_cols=119 Identities=23% Similarity=0.461 Sum_probs=85.2
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEE--------eecccccCCCceeeeceEEEEEcCCCCCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII--------IDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 249 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i--------~~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG 249 (485)
.....|+.|+|+|..... ...+|+.|+|+|.+. ...|..|.|.|.+. .-|-....|
T Consensus 144 ~r~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~-------~~~C~~C~G 207 (365)
T PRK14285 144 TRNMLCESCLGKKSEKGT---------SPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKII-------SNPCKSCKG 207 (365)
T ss_pred eecccCCCCCCcccCCCC---------CCccCCCccCceeEEecCceeEEeeecCCCCCccccc-------CCCCCCCCC
Confidence 345689999999974321 125799999999764 33599999999652 122222222
Q ss_pred CEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEE
Q 011450 250 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 329 (485)
Q Consensus 250 ~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~i 329 (485)
..++-. .-.++|+||+|+++|+++
T Consensus 208 ~g~v~~--------------------------------------------------------~~~~~V~Ip~G~~~G~~i 231 (365)
T PRK14285 208 KGSLKK--------------------------------------------------------KETIELKIPAGIDDNQQI 231 (365)
T ss_pred CCEEec--------------------------------------------------------cEEEEEEECCCCCCCCEE
Confidence 221100 013689999999999999
Q ss_pred EEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHH
Q 011450 330 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVE 369 (485)
Q Consensus 330 rl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~ 369 (485)
+++|+|.+..++ +.+|||||+|+|..|+.++.+..+|+.
T Consensus 232 ~~~g~G~~~~~~-~~~GDL~v~i~v~~h~~f~R~G~dL~~ 270 (365)
T PRK14285 232 KMRGKGSVNPDN-QQYGDLYIKILIKPHKIFKRNGKDLYA 270 (365)
T ss_pred EEeeccccCCCC-CCCCCEEEEEEEecCCCeEEeccceEE
Confidence 999999987653 457999999999999999888766643
No 65
>PHA02624 large T antigen; Provisional
Probab=99.18 E-value=1.5e-11 Score=133.38 Aligned_cols=62 Identities=27% Similarity=0.492 Sum_probs=57.5
Q ss_pred cCCCcchhccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhc
Q 011450 42 AGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYD 106 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~A--s~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD 106 (485)
...++|++|||+++| +.+|||+|||+||++||||++ +++++|++|++||++|+|+.+|..|+
T Consensus 9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---Gdeekfk~Ln~AYevL~d~~k~~r~~ 72 (647)
T PHA02624 9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQEGVKSARQS 72 (647)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CcHHHHHHHHHHHHHHhcHHHhhhcc
Confidence 356999999999999 999999999999999999997 45789999999999999999999993
No 66
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.16 E-value=5.3e-11 Score=124.53 Aligned_cols=66 Identities=18% Similarity=0.334 Sum_probs=51.4
Q ss_pred hccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 300 AILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 300 AllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
+.|++...|.. .-.++|.||+|+++|++++++|+|+|...+ +.+|||||+|+|..++.+..+..+|
T Consensus 199 ~~C~G~g~v~~-~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~-~~~GDL~v~i~v~~h~~F~R~G~DL 264 (371)
T PRK14287 199 ATCGGKGKVRK-RKKINVKVPAGIDHGQQLRVSGQGEAGVNG-GPPGDLYVVFNVKPHEFFERDGDDI 264 (371)
T ss_pred CCCCCeeEEee-eEEEEEEECCcCCCCCEEEEccCCcCCCCC-CCCccEEEEEEEecCCCEEEecCCe
Confidence 44555555542 123789999999999999999999997644 4689999999999988887666444
No 67
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.14 E-value=9.4e-11 Score=123.50 Aligned_cols=52 Identities=27% Similarity=0.430 Sum_probs=44.6
Q ss_pred EEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 315 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 315 ~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
++|.||+|+++|++|+++|+|.+..++ ..+|||||+|+|.-++.+..+..+|
T Consensus 244 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDL~i~i~v~~h~~F~R~G~DL 295 (392)
T PRK14279 244 INVRIPPGVEDGQRIRLAGQGEAGLRG-APSGDLYVTVHVRPDKVFGRDGDDL 295 (392)
T ss_pred eEEEeCCCCCCCcEEEEeCCccCCCCC-CCCCCEEEEEEEecCCcceeecCcE
Confidence 689999999999999999999987644 4579999999999988887766544
No 68
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.14 E-value=9.4e-11 Score=122.77 Aligned_cols=117 Identities=27% Similarity=0.523 Sum_probs=83.0
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe--------ecccccCCCceeeeceEEEEEcCCCCCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQSKRSMKVVIPPGVSNG 249 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG 249 (485)
.....|+.|+|+|..... ...+|+.|+|+|.+.. ..|..|.|.|.+.. -+--..+|
T Consensus 142 ~r~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-------~~C~~C~G 205 (373)
T PRK14301 142 PKNVTCDDCGGSGAAPGT---------SPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVIT-------HPCPKCKG 205 (373)
T ss_pred eecccCCCCCCcccCCCC---------CCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecC-------CCCCCCCC
Confidence 345689999999975321 1257999999997653 35999999996421 11222222
Q ss_pred CEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEE
Q 011450 250 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 329 (485)
Q Consensus 250 ~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~i 329 (485)
..++ .. .-.++|.||+|+++|+++
T Consensus 206 ~g~v-------------------------------------------------------~~-~~~l~V~Ip~G~~~G~~i 229 (373)
T PRK14301 206 SGIV-------------------------------------------------------QQ-TRELKVRIPAGVDTGSRL 229 (373)
T ss_pred Ccee-------------------------------------------------------cc-ceEEEEEeCCCCcCCCEE
Confidence 1111 00 013689999999999999
Q ss_pred EEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 330 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 330 rl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
+++|+|+|...+ +.+|||||+|+|..|+.+..+..+|
T Consensus 230 ~~~g~G~~~~~~-~~~GDLiv~i~v~~h~~f~r~G~DL 266 (373)
T PRK14301 230 RLRGEGEPGVHG-GPPGDLYVVITVEDDKIFQRQGQDL 266 (373)
T ss_pred EEeccccCCCCC-CCCcCEEEEEEEEECCCceeecCcE
Confidence 999999987543 4689999999999999988766554
No 69
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.12 E-value=1.3e-10 Score=122.12 Aligned_cols=117 Identities=27% Similarity=0.502 Sum_probs=83.0
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe------------ecccccCCCceeeeceEEEEEcCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII------------DHCRRCGGNGEVQSKRSMKVVIPPG 245 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~k~l~V~IP~G 245 (485)
.....|+.|+|+|..... ...+|+.|+|+|.+.. ..|..|.|.|.+. .-+..
T Consensus 144 ~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~-------~~~C~ 207 (380)
T PRK14276 144 NREATCHTCNGSGAKPGT---------SPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEI-------KEPCQ 207 (380)
T ss_pred eccccCCCCcCcccCCCC---------CCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccc-------cCCCC
Confidence 345689999999974321 1357999999997643 2499999999652 22222
Q ss_pred CCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCC
Q 011450 246 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQP 325 (485)
Q Consensus 246 v~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~ 325 (485)
...|..++- . .-.++|.||+|+++
T Consensus 208 ~C~G~g~~~-------------------------------------------------------~-~~~l~V~Ip~G~~~ 231 (380)
T PRK14276 208 TCHGTGHEK-------------------------------------------------------Q-AHTVSVKIPAGVET 231 (380)
T ss_pred CCCCceEEE-------------------------------------------------------E-EEEEEEEeCCCccC
Confidence 223322210 0 01368999999999
Q ss_pred CCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 326 GDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 326 G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
|++++++|+|+|..++ ..+|||||+|+|..++.+..+..+|
T Consensus 232 G~~i~l~G~G~~~~~~-~~~GDL~v~i~v~~h~~F~R~G~DL 272 (380)
T PRK14276 232 GQQIRLQGQGEAGFNG-GPYGDLYVVFRVEPSKKFERDGSTI 272 (380)
T ss_pred CcEEEEeccccCCCCC-CCCcCEEEEEEEEECcceeeecceE
Confidence 9999999999997654 4689999999999998888665544
No 70
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.09 E-value=4.3e-10 Score=117.76 Aligned_cols=48 Identities=29% Similarity=0.486 Sum_probs=42.0
Q ss_pred EEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChh
Q 011450 315 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDP 363 (485)
Q Consensus 315 ~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~ 363 (485)
++|.||+|+++|++|+++|+|.+...+ +.+|||||+|+|..++.+..+
T Consensus 224 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDL~v~v~v~~h~~F~R~ 271 (372)
T PRK14296 224 IEVNIPKGIRPNQQIKLSQKGHASLNN-GVNGDLIIDIYLKESKVFEII 271 (372)
T ss_pred EEEEECCCCCCCCEEEEeccccCCCCC-CCCccEEEEEEEeCCCCEEEe
Confidence 689999999999999999999987543 468999999999988888763
No 71
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.09 E-value=1.6e-10 Score=121.16 Aligned_cols=117 Identities=24% Similarity=0.473 Sum_probs=81.3
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe------------ecccccCCCceeeeceEEEEEcCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII------------DHCRRCGGNGEVQSKRSMKVVIPPG 245 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~k~l~V~IP~G 245 (485)
.....|+.|+|+|..... ...+|+.|+|+|.++. ..|..|.|.|.+.. -+-.
T Consensus 139 ~r~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------~~C~ 202 (377)
T PRK14298 139 PRAERCSTCSGTGAKPGT---------SPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIE-------SPCP 202 (377)
T ss_pred EeeccCCCCCCCcccCCC---------CCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccC-------CCCC
Confidence 345689999999975321 1357999999997653 24999999996421 1222
Q ss_pred CCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCC
Q 011450 246 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQP 325 (485)
Q Consensus 246 v~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~ 325 (485)
...|..+ |.. .-.++|.||||+++
T Consensus 203 ~C~G~g~-------------------------------------------------------v~~-~~~l~V~IppG~~~ 226 (377)
T PRK14298 203 VCSGTGK-------------------------------------------------------VRK-TRKITVNVPAGADS 226 (377)
T ss_pred CCCCccE-------------------------------------------------------EEE-EEEEEecCCCCCCC
Confidence 2222111 110 01368999999999
Q ss_pred CCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 326 GDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 326 G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
|++++++|+|++...+ +.+|||||+|+|.-.+.+..+..+|
T Consensus 227 G~~i~~~g~G~~~~~~-~~~GDL~i~i~v~~h~~F~R~G~DL 267 (377)
T PRK14298 227 GLRLKLSGEGEAGSPG-APSGDLYIVLHVKEHDYFERVGDDI 267 (377)
T ss_pred CCEEEEecccCCCCCC-CCCcCEEEEEEEecCCCeEEEcCcE
Confidence 9999999999986443 5689999999999888777655444
No 72
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.09 E-value=2.4e-10 Score=119.70 Aligned_cols=54 Identities=17% Similarity=0.367 Sum_probs=46.8
Q ss_pred EEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHHHHHH
Q 011450 315 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEI 371 (485)
Q Consensus 315 ~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ll~~l 371 (485)
++|.||+|+++|++++++|+|.+..++ .|||||+|+|..|+.++.+..+|+..+
T Consensus 215 ~~V~Ip~G~~~G~~i~~~G~G~~~~~~---~GDL~v~i~v~~h~~f~r~g~dL~~~~ 268 (371)
T PRK14292 215 VKVKLPRGIDEGYRIRVAGMGNEGPGG---NGDLYVHIEMEPHPELRREQEHLIYEA 268 (371)
T ss_pred EEEEECCCCCCCcEEEEecCcCCCCCC---CCCEEEEEEEecCCccccchhceeEEe
Confidence 689999999999999999999986433 399999999999999998887775443
No 73
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.08 E-value=2.3e-10 Score=120.02 Aligned_cols=117 Identities=24% Similarity=0.507 Sum_probs=81.9
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe------------ecccccCCCceeeeceEEEEEcCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII------------DHCRRCGGNGEVQSKRSMKVVIPPG 245 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~k~l~V~IP~G 245 (485)
.....|+.|+|+|..... ...+|+.|+|+|.+.. ..|..|.|.|.+. .-+.-
T Consensus 141 ~r~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------~~~C~ 204 (376)
T PRK14280 141 PKEETCDTCHGSGAKPGT---------SKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEI-------KEKCP 204 (376)
T ss_pred eeeccCCCCCCcccCCCC---------CCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCcee-------cCCCC
Confidence 345689999999964321 1357999999997642 3599999999642 22222
Q ss_pred CCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCC
Q 011450 246 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQP 325 (485)
Q Consensus 246 v~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~ 325 (485)
...|..+. .. .-.++|.||+|+++
T Consensus 205 ~C~G~g~v-------------------------------------------------------~~-~~~i~V~Ip~G~~~ 228 (376)
T PRK14280 205 TCHGKGKV-------------------------------------------------------RK-RKKINVKIPAGVDN 228 (376)
T ss_pred CCCCceEE-------------------------------------------------------EE-EEEEEEEeCCCCcC
Confidence 22222111 00 01368999999999
Q ss_pred CCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 326 GDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 326 G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
|++++++|+|+|...+ +.+|||||+|+|.-++.+..+..+|
T Consensus 229 G~~i~l~G~G~~~~~~-~~~GDL~v~i~v~~h~~F~R~G~DL 269 (376)
T PRK14280 229 GQQIRVSGEGEPGVNG-GPAGDLYVVFRVRPHEFFERDGDDI 269 (376)
T ss_pred CcEEEEcccccCCCCC-CCCcCEEEEEEEecCCCeEEecCCE
Confidence 9999999999997654 5689999999999888877655443
No 74
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.07 E-value=2.2e-10 Score=120.33 Aligned_cols=52 Identities=21% Similarity=0.346 Sum_probs=43.4
Q ss_pred EEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 315 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 315 ~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
++|.||+|+++|++|+++|+|++...+ ...|||||+|+|..++.|..+..+|
T Consensus 223 i~V~Ip~G~~~G~~I~l~g~G~~~~~~-~~~GDL~v~v~v~~h~~f~R~G~DL 274 (380)
T PRK14297 223 IKVNVPAGVDTGNVIPLRGQGEHGKNG-GPTGDLYINIRVAPHKTFKRKGFDI 274 (380)
T ss_pred EEEEeCCCCCCCcEEEEecCccCCCCC-CCCccEEEEEEEcCCCCEEEeCCCE
Confidence 688999999999999999999986543 4579999999999999886554333
No 75
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.06 E-value=2.5e-10 Score=120.13 Aligned_cols=53 Identities=26% Similarity=0.427 Sum_probs=44.5
Q ss_pred eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 314 MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 314 ~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
.++|.||+|+++|++++++|+|+|...+ ..+|||||+|+|.-.+.+..+..+|
T Consensus 236 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~~GDL~v~i~v~~h~~F~R~G~DL 288 (389)
T PRK14295 236 TMQVRIPAGVSDGQRIRLRGKGAPGERG-GPAGDLYVVVHVDPHPVFGRSGDNL 288 (389)
T ss_pred EEEEEeCCCCCCCCEEEEcccccCCCCC-CCCccEEEEEEEecCCCEEEecCCE
Confidence 3689999999999999999999987543 4689999999999888777665444
No 76
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.06 E-value=2.7e-10 Score=119.30 Aligned_cols=117 Identities=28% Similarity=0.543 Sum_probs=81.9
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe--------ecccccCCCceeeeceEEEEEcCCCCCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQSKRSMKVVIPPGVSNG 249 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG 249 (485)
.....|+.|+|+|..... ...+|+.|+|+|.+.. ..|..|.|.|.+.. -|--...|
T Consensus 148 ~r~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-------~~C~~C~G 211 (372)
T PRK14286 148 PRLESCVDCNGSGASKGS---------SPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVIS-------NPCKTCGG 211 (372)
T ss_pred eccccCCCCcCCCcCCCC---------CCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEec-------ccCCCCCC
Confidence 456789999999974321 1257999999997643 35999999996521 12112222
Q ss_pred CEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEE
Q 011450 250 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 329 (485)
Q Consensus 250 ~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~i 329 (485)
.|- +.. .-.++|.||+|+++|+++
T Consensus 212 -------~g~------------------------------------------------~~~-~~~l~V~Ip~G~~~G~~i 235 (372)
T PRK14286 212 -------QGL------------------------------------------------QEK-RRTINIKIPPGVETGSRL 235 (372)
T ss_pred -------CcE------------------------------------------------Eec-ceEEEEEECCCCCCCCEE
Confidence 111 110 013689999999999999
Q ss_pred EEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 330 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 330 rl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
+++|+|+|..++ ..+|||||+|+|.-++.+..+..+|
T Consensus 236 ~~~g~G~~~~~~-~~~GDL~i~i~v~~h~~F~R~G~DL 272 (372)
T PRK14286 236 KVSGEGEAGPNG-GPHGDLYVVTHIKKHELFERQGNDL 272 (372)
T ss_pred EECCccccCCCC-CCCceEEEEEEEccCCCEEEecCCE
Confidence 999999997654 4679999999999888777655443
No 77
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.06 E-value=2.8e-10 Score=119.42 Aligned_cols=116 Identities=22% Similarity=0.453 Sum_probs=82.2
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe------------ecccccCCCceeeeceEEEEEcCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII------------DHCRRCGGNGEVQSKRSMKVVIPPG 245 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~k~l~V~IP~G 245 (485)
.....|+.|+|+|..... ...+|+.|+|+|.+.. ..|..|.|.|... .-|-.
T Consensus 144 ~r~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------~~~C~ 207 (378)
T PRK14283 144 RHTKKCPVCNGSRAEPGS---------EVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIV-------EKPCS 207 (378)
T ss_pred eeeccCCCCCccccCCCC---------CCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceec-------CCCCC
Confidence 345689999999964321 1357999999998753 3499999999642 12222
Q ss_pred CCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCC
Q 011450 246 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQP 325 (485)
Q Consensus 246 v~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~ 325 (485)
...|..+.. . .-.++|.||+|+++
T Consensus 208 ~C~G~g~v~-------------------------------------------------------~-~~~l~V~IppG~~~ 231 (378)
T PRK14283 208 NCHGKGVVR-------------------------------------------------------E-TKTISVKIPAGVET 231 (378)
T ss_pred CCCCceeec-------------------------------------------------------c-ceeEEEEECCCCCC
Confidence 222222210 0 01368999999999
Q ss_pred CCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHH
Q 011450 326 GDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERA 366 (485)
Q Consensus 326 G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ 366 (485)
|++++++|+|+|...+ +.+|||||+|+|..++.+..+..+
T Consensus 232 G~~i~l~g~G~~~~~~-~~~GDLiv~i~v~~~~~f~r~G~D 271 (378)
T PRK14283 232 GSRLRVSGEGEMGDRG-GEPGDLYVVIKVKPHKIFRREGAN 271 (378)
T ss_pred CcEEEEeccccCCCCC-CCCccEEEEEEEEcCCCEEEecCC
Confidence 9999999999997653 578999999999999887755433
No 78
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.05 E-value=3.1e-10 Score=118.77 Aligned_cols=53 Identities=23% Similarity=0.341 Sum_probs=44.5
Q ss_pred eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 314 MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 314 ~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
.++|.||+|+.+|++|+++|+|.+...+ +..|||||+|+|..++.+..+..+|
T Consensus 226 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~i~i~v~~h~~F~r~G~DL 278 (369)
T PRK14282 226 RTTVKIPAGVEDGTVLRITGGGNAGYYG-GPYGDLYVIVRVRPDPRFKRSGSDL 278 (369)
T ss_pred EEEEEeCCCCCCCCEEEEecccCCCCCC-CCCCCEEEEEEEecCCcEEEecCCE
Confidence 3789999999999999999999986543 4689999999999888877655444
No 79
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.05 E-value=2.9e-10 Score=119.58 Aligned_cols=53 Identities=21% Similarity=0.381 Sum_probs=43.9
Q ss_pred eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 314 MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 314 ~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
.++|.||+|+++|++++|+|+|+|...+ ..+|||||+|+|+-++.+..+..+|
T Consensus 229 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDL~v~i~v~~h~~F~R~G~DL 281 (386)
T PRK14277 229 KIKVNIPAGIDDGQMITLRGEGEPGIKG-GPNGDLYIVIKVKPHPLFKREGYNV 281 (386)
T ss_pred EEEEecCCCccCCcEEEEccccccCCCC-CCCccEEEEEEEecCCCeEEecCCE
Confidence 3689999999999999999999996543 4689999999999888777654433
No 80
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.04 E-value=1e-10 Score=121.03 Aligned_cols=70 Identities=37% Similarity=0.667 Sum_probs=64.3
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC------ccHHHHHHHHHHHHhhhccccccchhcccccc
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS------PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA 111 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~------~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~ 111 (485)
..-|+|+|||++.+++..+||++||+|.+|||||+-+. .+-+|++++|++||+.|+|+..|+.|=.||.-
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP 171 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP 171 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence 35799999999999999999999999999999999763 35788999999999999999999999999864
No 81
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.04 E-value=4.8e-10 Score=117.65 Aligned_cols=117 Identities=25% Similarity=0.421 Sum_probs=81.4
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe------------ecccccCCCceeeeceEEEEEcCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII------------DHCRRCGGNGEVQSKRSMKVVIPPG 245 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~k~l~V~IP~G 245 (485)
.....|+.|+|+|..... ...+|+.|+|+|.+.. ..|..|+|.|.+. .-+-.
T Consensus 137 ~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-------~~~C~ 200 (378)
T PRK14278 137 DTAVLCDRCHGKGTAGDS---------KPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVI-------PDPCH 200 (378)
T ss_pred EeeccCCCCcCccCCCCC---------CceecCCccCceEEEEEEeccceeEEEEEECCCCCccceee-------CCCCC
Confidence 345689999999974321 1357999999997642 3599999999642 11222
Q ss_pred CCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCC
Q 011450 246 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQP 325 (485)
Q Consensus 246 v~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~ 325 (485)
...|..++ .. .-.++|.||||+++
T Consensus 201 ~C~G~g~v-------------------------------------------------------~~-~~~~~V~Ip~G~~~ 224 (378)
T PRK14278 201 ECAGDGRV-------------------------------------------------------RA-RREITVKIPAGVGD 224 (378)
T ss_pred CCCCceeE-------------------------------------------------------ec-ceEEEEEECCCCCC
Confidence 22222111 00 11368999999999
Q ss_pred CCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 326 GDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 326 G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
|++|+++|+|.+..+. +..|||||+|+|.-++.+..+..+|
T Consensus 225 G~~i~~~g~G~~~~~~-~~~GDL~v~i~~~~h~~F~R~G~DL 265 (378)
T PRK14278 225 GMRIRLAAQGEVGPGG-GPAGDLYVEVHEQPHDVFVRDGDDL 265 (378)
T ss_pred CcEEEEccCcCCCCCC-CCCCCEEEEEEECcCCCEEEcCCCE
Confidence 9999999999987543 4579999999999888777655433
No 82
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.04 E-value=4.5e-10 Score=116.89 Aligned_cols=53 Identities=23% Similarity=0.369 Sum_probs=44.8
Q ss_pred eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 314 MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 314 ~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
.++|.||+|+++|++++++|+|.+...+ ...|||||+|+|..++.+..+..+|
T Consensus 217 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~v~i~v~~h~~f~r~g~DL 269 (354)
T TIGR02349 217 TITVKIPAGVDTGQRLRVSGKGNAGENG-GPNGDLYVVIRVKPHKIFERDGNDL 269 (354)
T ss_pred eEEEEECCCCCCCCEEEEecCccCCCCC-CCCCCEEEEEEEecCcceEEecCCE
Confidence 3689999999999999999999986443 4689999999999998888765443
No 83
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.02 E-value=5.3e-10 Score=116.96 Aligned_cols=114 Identities=25% Similarity=0.487 Sum_probs=80.3
Q ss_pred CcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe--------ecccccCCCceeeeceEEEEEcCCCCCCCC
Q 011450 179 CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQSKRSMKVVIPPGVSNGA 250 (485)
Q Consensus 179 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~ 250 (485)
....|+.|+|+|.... ...+|+.|+|+|.+.. ..|..|.|.|.+. .-+.-...|.
T Consensus 139 r~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------~~~C~~C~G~ 201 (369)
T PRK14288 139 YQSVCESCDGTGAKDK----------ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKII-------KTPCQACKGK 201 (369)
T ss_pred eeccCCCCCCcccCCC----------CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEc-------cccCccCCCc
Confidence 3458999999996431 1257999999997643 3599999999642 1112222221
Q ss_pred EEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEE
Q 011450 251 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVK 330 (485)
Q Consensus 251 ~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~ir 330 (485)
.+ |.. .-.++|.||+|+++|++++
T Consensus 202 g~-------------------------------------------------------v~~-~~~l~V~IP~G~~~G~~i~ 225 (369)
T PRK14288 202 TY-------------------------------------------------------ILK-DEEIDAIIPEGIDDQNRMV 225 (369)
T ss_pred ce-------------------------------------------------------EEE-EEEEEEecCCCCCCCCEEE
Confidence 11 000 0136899999999999999
Q ss_pred EcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 331 LQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 331 l~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
++|+|.+..+ +..|||||+|+|..++.+..+..+|
T Consensus 226 l~g~G~~~~~--~~~GDL~v~i~v~~h~~f~R~G~DL 260 (369)
T PRK14288 226 LKNKGNEYEK--GKRGDLYLEARVKEDEHFKREGCDL 260 (369)
T ss_pred EccCccCCCC--CCCCCEEEEEEEEECCCcEEeCCEE
Confidence 9999998653 4689999999999999887665444
No 84
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.02 E-value=5.6e-10 Score=117.63 Aligned_cols=117 Identities=27% Similarity=0.583 Sum_probs=81.1
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe--------ecccccCCCceeeeceEEEEEcCCCCCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQSKRSMKVVIPPGVSNG 249 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG 249 (485)
.....|+.|+|+|..... ...+|+.|+|+|.+.. ..|+.|.|.|.+.. -|.-...|
T Consensus 156 ~r~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-------~~C~~C~G 219 (391)
T PRK14284 156 SGYKSCDACSGSGANSSQ---------GIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVIT-------DPCSVCRG 219 (391)
T ss_pred eeeccCCCCcccccCCCC---------CCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccC-------CcCCCCCC
Confidence 345689999999974321 1357999999998653 36999999986421 11111111
Q ss_pred CEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEE
Q 011450 250 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 329 (485)
Q Consensus 250 ~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~i 329 (485)
.| .|.. ...++|.||+|+.+|++|
T Consensus 220 -------~g------------------------------------------------~v~~-~~~l~V~Ip~G~~~G~~i 243 (391)
T PRK14284 220 -------QG------------------------------------------------RIKD-KRSVHVHIPAGVDSGMRL 243 (391)
T ss_pred -------cc------------------------------------------------eecc-eEEEEEEECCCCCCCCEE
Confidence 11 1100 013689999999999999
Q ss_pred EEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 330 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 330 rl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
+++|+|-+..++ +..|||||+|+|.-++.+..+..+|
T Consensus 244 ~~~g~G~~~~~~-~~~GDL~v~i~v~~h~~F~R~G~DL 280 (391)
T PRK14284 244 KMEGYGDAGQNG-APAGDLYVFIDVEPHPVFERRGDDL 280 (391)
T ss_pred EEeccccCCCCC-CCCCCEEEEEEEecCCCceeecCCE
Confidence 999999876543 4679999999999888777654433
No 85
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.01 E-value=6.9e-10 Score=115.99 Aligned_cols=117 Identities=26% Similarity=0.536 Sum_probs=80.8
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe--------ecccccCCCceeeeceEEEEEcCCCCCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQSKRSMKVVIPPGVSNG 249 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG 249 (485)
.....|+.|+|+|...... ..+|+.|+|.|.++. ..|+.|.|.|.+.. -+--..+|
T Consensus 142 ~r~~~C~~C~G~G~~~~~~---------~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~-------~~C~~C~G 205 (366)
T PRK14294 142 QKLETCEECHGSGCEPGTS---------PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV-------SPCKTCHG 205 (366)
T ss_pred eecccCCCCCCccccCCCC---------cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC-------cCCCCCCC
Confidence 3456899999999753221 357999999997653 35999999996421 11111111
Q ss_pred CEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEE
Q 011450 250 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 329 (485)
Q Consensus 250 ~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~i 329 (485)
..+ |.. ...++|.||+|+++|+++
T Consensus 206 ~g~-------------------------------------------------------v~~-~~~l~V~Ip~G~~~G~~i 229 (366)
T PRK14294 206 QGR-------------------------------------------------------VRV-SKTVQVKIPAGVDTGSRL 229 (366)
T ss_pred ceE-------------------------------------------------------eec-ceeEEEecCCCCcCCcEE
Confidence 111 100 113689999999999999
Q ss_pred EEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 330 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 330 rl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
+++|+|.+...+ +.+|||||+|+|.-++.+..+..+|
T Consensus 230 ~~~g~G~~~~~~-~~~GDl~v~i~v~~h~~F~R~G~DL 266 (366)
T PRK14294 230 RLRGEGEAGVRG-GPPGDLYVFLTVEPHEFFERDGNDV 266 (366)
T ss_pred EEccCccCCCCC-CCCCcEEEEEEEccCCcceecCCCE
Confidence 999999986543 4689999999999777777655443
No 86
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.01 E-value=5.4e-10 Score=117.97 Aligned_cols=53 Identities=17% Similarity=0.294 Sum_probs=44.4
Q ss_pred eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 314 MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 314 ~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
.++|.||+|+++|++|+++|+|.+...+ +..|||||+|++.-++.+..+..+|
T Consensus 236 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDL~i~i~~~~h~~F~R~G~DL 288 (397)
T PRK14281 236 TVKVTVPAGVQDGNYLTLRGQGNAGPRG-GAPGDLIVVIEEKPHELFVRNGDDV 288 (397)
T ss_pred EEEEecCCCCCCCCEEEEecccccCCCC-CCCCcEEEEEEEcCCCCeEEecCCE
Confidence 3689999999999999999999987643 4689999999999888777665443
No 87
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.00 E-value=6.4e-10 Score=116.43 Aligned_cols=116 Identities=26% Similarity=0.505 Sum_probs=80.4
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe--------ecccccCCCceeeeceEEEEEcCCCCCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQSKRSMKVVIPPGVSNG 249 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG 249 (485)
.....|+.|+|+|..... ....|+.|+|+|.++. ..|..|.|.|.+.. -+--...|
T Consensus 140 ~r~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-------~~C~~C~G 203 (371)
T PRK10767 140 PTLVTCDTCHGSGAKPGT---------SPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIK-------DPCKKCHG 203 (371)
T ss_pred eecccCCCCCCcccCCCC---------CCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECC-------CCCCCCCC
Confidence 345689999999975321 1247999999997643 35999999996421 11111122
Q ss_pred CEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEE
Q 011450 250 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 329 (485)
Q Consensus 250 ~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~i 329 (485)
..+ +.. .-.++|.||+|+++|+++
T Consensus 204 ~g~-------------------------------------------------------v~~-~~~l~V~Ip~G~~~G~~i 227 (371)
T PRK10767 204 QGR-------------------------------------------------------VEK-EKTLSVKIPAGVDTGDRI 227 (371)
T ss_pred Cce-------------------------------------------------------Eee-eeeEEEecCCCCCCCcEE
Confidence 111 100 013689999999999999
Q ss_pred EEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHH
Q 011450 330 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERA 366 (485)
Q Consensus 330 rl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~ 366 (485)
+++|+|++.... +.+|||||+|+|.-++.+..+..+
T Consensus 228 ~~~g~G~~~~~~-~~~GDL~v~i~v~~h~~F~R~G~D 263 (371)
T PRK10767 228 RLSGEGEAGERG-GPAGDLYVQIHVKEHPIFERDGND 263 (371)
T ss_pred EEecCccCCCCC-CCCcCEEEEEEEeeCCCEEEecCC
Confidence 999999986544 468999999999988777655433
No 88
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.99 E-value=7.9e-10 Score=115.79 Aligned_cols=117 Identities=23% Similarity=0.428 Sum_probs=81.4
Q ss_pred CCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe--------ecccccCCCceeeeceEEEEEcCCCCCCC
Q 011450 178 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQSKRSMKVVIPPGVSNG 249 (485)
Q Consensus 178 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG 249 (485)
.....|+.|+|+|..... ...+|+.|+|+|.++. ..|..|.|.|.+. .-|--..+|
T Consensus 143 ~r~~~C~~C~G~g~~~~~---------~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------~~~C~~C~G 206 (372)
T PRK14300 143 SSEVKCDTCHGSGSEKGE---------TVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQII-------KNPCKKCHG 206 (372)
T ss_pred eeccccCCCCCcccCCCC---------CCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEe-------CCCCCCCCC
Confidence 445789999999975321 1358999999997643 3599999999652 122222222
Q ss_pred CEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEE
Q 011450 250 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 329 (485)
Q Consensus 250 ~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~i 329 (485)
..++-.. -.++|.||+|+++|++|
T Consensus 207 ~g~v~~~--------------------------------------------------------~~~~V~Ip~G~~~G~~i 230 (372)
T PRK14300 207 MGRYHKQ--------------------------------------------------------RNLSVNIPAGVENGTRI 230 (372)
T ss_pred ceEEEee--------------------------------------------------------EEEEEEECCCCCCCcEE
Confidence 2211000 03689999999999999
Q ss_pred EEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 330 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 330 rl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
+++|+|.+...+ +..|||||+|+|.-.+.+..+..+|
T Consensus 231 ~l~g~G~~~~~~-~~~GDL~v~i~v~~h~~f~R~G~Dl 267 (372)
T PRK14300 231 RHTGEGEAGIRG-GNSGDLYVDIAIKPHDIYKVDGANL 267 (372)
T ss_pred EEeccccCCCCC-CCCCCEEEEEEECCCCCeEEecCCE
Confidence 999999986443 4679999999999887776554433
No 89
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=3.1e-09 Score=111.71 Aligned_cols=53 Identities=25% Similarity=0.310 Sum_probs=43.6
Q ss_pred eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 314 MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 314 ~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
.++|.||+|+.+|++|+++|+|-....+ +..|||||+|++.-++.+..+..+|
T Consensus 225 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~g-~~~GDL~v~i~~~~h~~F~r~G~DL 277 (382)
T PRK14291 225 TIKVRIPPGVDNGSKLRVPGKGHAGRFG-GPPGDLYIIVKVKPHPLFERRGDNL 277 (382)
T ss_pred EEEEEeCCCCCCCCEEEEecCcCCCCCC-CCCccEEEEEEEccCCCeeeecCCe
Confidence 3789999999999999999999865433 4689999999999888877655443
No 90
>PRK14290 chaperone protein DnaJ; Provisional
Probab=98.88 E-value=2.2e-09 Score=112.16 Aligned_cols=57 Identities=23% Similarity=0.421 Sum_probs=50.9
Q ss_pred eEEEEEcCCCCCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccccccceEEE
Q 011450 236 RSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK 292 (485)
Q Consensus 236 k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R~G~DL~~~ 292 (485)
..++|.||+|+++|++|+++|+|.+...+..+|||||+|+|..++.|++++.+|+.+
T Consensus 296 g~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~ 352 (365)
T PRK14290 296 EKYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIRE 352 (365)
T ss_pred ceEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 368999999999999999999999866556789999999999999999998887655
No 91
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.88 E-value=3e-09 Score=112.90 Aligned_cols=51 Identities=18% Similarity=0.259 Sum_probs=43.1
Q ss_pred EEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 315 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 315 ~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
++|.||+|+.+|++|+++|+|-...+ +..|||||+|+++-.+.|..+..+|
T Consensus 226 l~V~Ip~G~~dG~~I~~~G~Gd~~~~--~~pGDLiv~I~~~ph~~F~R~G~DL 276 (421)
T PTZ00037 226 LEVNIDKGVPNQHKITFHGEADEKPN--EIPGNVVFILNEKPHDTFKREGGDL 276 (421)
T ss_pred EEEeeCCCCCCCcEEEEecccCCCCC--CCCCcEEEEEEecCCCCcEEeCCeE
Confidence 68999999999999999999987654 4689999999999888777655444
No 92
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=2.1e-09 Score=108.99 Aligned_cols=78 Identities=28% Similarity=0.411 Sum_probs=68.8
Q ss_pred ccccccceEEEEEecchhhccCceEEEEccCC-eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCC
Q 011450 282 IHRDGLNLFSKISVDYTEAILGTSMEVETVEG-MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDI 360 (485)
Q Consensus 282 F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG-~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~l 360 (485)
+.|+|.||++.+.|||.||++|+++.| +++| .++|+||+|+++|++++++|+|++. |||||+|+|+-++.+
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~f 196 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPVF 196 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCCe
Confidence 357899999999999999999999998 5677 4799999999999999999999862 999999999998887
Q ss_pred ChhHHHH
Q 011450 361 SDPERAL 367 (485)
Q Consensus 361 s~~q~~l 367 (485)
..+..+|
T Consensus 197 ~R~G~DL 203 (291)
T PRK14299 197 RLEGDDL 203 (291)
T ss_pred EEECCEE
Confidence 7665444
No 93
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.86 E-value=3e-09 Score=98.58 Aligned_cols=52 Identities=31% Similarity=0.450 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHHHHHhhhccccccchhcc
Q 011450 56 ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR 107 (485)
Q Consensus 56 As~~eIk~AYr~la~k~HPD~n~~~------~a~e~F~~I~~AYevLsDp~kR~~YD~ 107 (485)
.+..+|+++||+|+++||||+.... .+.+.|+.||+||++|+||.+|+.|+.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL 60 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML 60 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 4788999999999999999986432 266889999999999999999999995
No 94
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.84 E-value=4e-09 Score=99.14 Aligned_cols=63 Identities=19% Similarity=0.265 Sum_probs=55.7
Q ss_pred CCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHHHHhhhccccccchhc
Q 011450 44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYD 106 (485)
Q Consensus 44 ~d~Y~iLgv~~~--As~~eIk~AYr~la~k~HPD~n~~~~------a~e~F~~I~~AYevLsDp~kR~~YD 106 (485)
.|||++||+++. .+..++++.|++|.+++|||+..... +.+.-..||+||.+|+||.+|+.|=
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YL 72 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAI 72 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHH
Confidence 599999999998 89999999999999999999975433 3445678999999999999999995
No 95
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.66 E-value=3.2e-08 Score=101.16 Aligned_cols=82 Identities=18% Similarity=0.340 Sum_probs=66.2
Q ss_pred ccccceEEEEEecchhhccCceEEE----EccC--C--------eEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEE
Q 011450 284 RDGLNLFSKISVDYTEAILGTSMEV----ETVE--G--------MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHL 349 (485)
Q Consensus 284 R~G~DL~~~~~Isl~eAllG~~i~V----~tld--G--------~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~ 349 (485)
++|.||++.+.|+|.||+.|+...| ++++ | .++|.||+|+++|++++++|+|+|..++ ..+||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~ 193 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW 193 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence 5689999999999999999996554 3343 3 3688899999999999999999997543 5689999
Q ss_pred EEEEEEcCCCCChhHHH
Q 011450 350 FIVNVLIPKDISDPERA 366 (485)
Q Consensus 350 V~~~V~~P~~ls~~q~~ 366 (485)
|+|+|.-.+.+..+..+
T Consensus 194 v~i~v~ph~~f~r~g~D 210 (306)
T PRK10266 194 LVIHIAPHPLFDIVGQD 210 (306)
T ss_pred EEEEEcCCCCeEEeCCc
Confidence 99999965666655433
No 96
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.52 E-value=7.2e-08 Score=90.86 Aligned_cols=64 Identities=30% Similarity=0.470 Sum_probs=57.6
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ccHHHHHHHHHHHHhhhccccccchhc
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYD 106 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~--~~a~e~F~~I~~AYevLsDp~kR~~YD 106 (485)
..|+|+||.|.++.+.++||+.||+|.+-.|||+|++ +.|...|--|..||..|-|+.-|..-+
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 5799999999999999999999999999999999985 568889999999999999998655443
No 97
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=6.6e-08 Score=94.83 Aligned_cols=66 Identities=36% Similarity=0.488 Sum_probs=59.4
Q ss_pred CCCcchhccCCCC---CCHHHHHHHHHHHHHHhCCCCCC---CccHHHHHHHHHHHHhhhccccccchhccc
Q 011450 43 GTDYYSTLNVRQN---ATLQEIKTSYRKLARKYHPDINK---SPGAEEKFKEISSAYEVLSDDEKRSVYDRF 108 (485)
Q Consensus 43 ~~d~Y~iLgv~~~---As~~eIk~AYr~la~k~HPD~n~---~~~a~e~F~~I~~AYevLsDp~kR~~YD~~ 108 (485)
..|+|.+|||+.. |++.+|.+|.++...+||||+.. +.+..+-|+.|+.||+||+|+.+|.+||.-
T Consensus 42 ~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~ 113 (379)
T COG5269 42 KVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN 113 (379)
T ss_pred hhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence 3799999999876 89999999999999999999873 345678999999999999999999999974
No 98
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=5.8e-07 Score=86.47 Aligned_cols=55 Identities=25% Similarity=0.567 Sum_probs=51.6
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHh-hhcc
Q 011450 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYE-VLSD 98 (485)
Q Consensus 44 ~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYe-vLsD 98 (485)
+.||.+|||..+|+.+|++.||.+||+++|||...+....++|.+|.+||. ||+.
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999988788899999999998 8874
No 99
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=98.21 E-value=2.5e-06 Score=74.44 Aligned_cols=57 Identities=37% Similarity=0.753 Sum_probs=44.7
Q ss_pred cccccCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccCCCceee
Q 011450 165 LDIRCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQ 233 (485)
Q Consensus 165 ~di~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~ 233 (485)
.+..|+|+|.. +|+.|+|+|.+...+ .+.++...+|+.|+|+|+. .|+.|.|+|++.
T Consensus 43 ~C~~C~GsG~~------~C~~C~G~G~v~~~~---~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~ 99 (111)
T PLN03165 43 PCFPCSGTGAQ------VCRFCVGSGNVTVEL---GGGEKEVSKCINCDGAGSL---TCTTCQGSGIQP 99 (111)
T ss_pred CCCCCCCCCCc------CCCCCcCcCeEEEEe---CCcEEEEEECCCCCCccee---eCCCCCCCEEEe
Confidence 44559999973 899999999887543 2345567899999999975 399999999764
No 100
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.16 E-value=1.9e-06 Score=97.01 Aligned_cols=54 Identities=39% Similarity=0.568 Sum_probs=46.8
Q ss_pred cCCCcchhccCCCC----CCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhc
Q 011450 42 AGTDYYSTLNVRQN----ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS 97 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~----As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLs 97 (485)
..-+-|+||.|+-+ -..+.||++|+|||++||||+| |+..++|..+++|||.|+
T Consensus 1279 S~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKN--PEGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1279 SVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKN--PEGREMFERVNKAYELLS 1336 (2235)
T ss_pred chHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHH
Confidence 45688999999855 2447899999999999999999 466799999999999998
No 101
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=98.08 E-value=2.9e-06 Score=80.52 Aligned_cols=49 Identities=27% Similarity=0.609 Sum_probs=45.1
Q ss_pred EeecccCCCCcEEEe--ecccccCCCceeeeceEEEEEcCCCCCCCCEEEEc
Q 011450 206 VSTCSKCGGDGKIII--DHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 255 (485)
Q Consensus 206 ~~~C~~C~G~G~~i~--~~C~~C~G~G~v~~~k~l~V~IP~Gv~dG~~Ir~~ 255 (485)
..+|+.|+|+|+++. .+|+.|+|.|+++.++++.+.+ .|+.+|++|++.
T Consensus 99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CCcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence 568999999999997 5799999999999999999999 999999999875
No 102
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=97.83 E-value=2.1e-05 Score=87.53 Aligned_cols=71 Identities=49% Similarity=0.871 Sum_probs=67.6
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhccccccCcC
Q 011450 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT 114 (485)
Q Consensus 44 ~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~~~~ 114 (485)
+|||++|||+++|+.++||+|||+||++||||+++.+.+.++|++|++||++|+||.+|+.||+||.++..
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d 72 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD 72 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence 69999999999999999999999999999999998888889999999999999999999999999987654
No 103
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=97.45 E-value=0.00017 Score=59.36 Aligned_cols=46 Identities=30% Similarity=0.616 Sum_probs=35.7
Q ss_pred ceEEEEEcCCCCCCCCEEEEccccCCCCCCC-CCccEEEEEEeeccc
Q 011450 235 KRSMKVVIPPGVSNGATMQIRGEGNFDRRRS-LAGDLFVALHVDEKQ 280 (485)
Q Consensus 235 ~k~l~V~IP~Gv~dG~~Ir~~G~Gd~~~~g~-~~GDL~v~I~v~~h~ 280 (485)
.+.++|.||+|+++|++++++|+|.+...+. ..|||||+++|.-..
T Consensus 26 g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~ 72 (81)
T PF01556_consen 26 GKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK 72 (81)
T ss_dssp S-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred CCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence 3689999999999999999999999654444 899999999998443
No 104
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.22 E-value=0.00052 Score=58.96 Aligned_cols=53 Identities=25% Similarity=0.312 Sum_probs=44.7
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccc
Q 011450 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDD 99 (485)
Q Consensus 44 ~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp 99 (485)
+.--.||||+++++.+.||+|+|++-...|||+..+|--. ..||||+++|...
T Consensus 56 ~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYlA---sKINEAKdlLe~~ 108 (112)
T KOG0723|consen 56 REAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYLA---SKINEAKDLLEGT 108 (112)
T ss_pred HHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHHH---HHHHHHHHHHhcc
Confidence 3445699999999999999999999999999999776422 5799999999743
No 105
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=96.96 E-value=0.00065 Score=53.84 Aligned_cols=42 Identities=33% Similarity=0.926 Sum_probs=28.8
Q ss_pred CCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEee------------cccccCCCceee
Q 011450 183 CKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------HCRRCGGNGEVQ 233 (485)
Q Consensus 183 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~------------~C~~C~G~G~v~ 233 (485)
|+.|+|+|..... ...+|+.|+|+|.+... .|+.|+|.|.+.
T Consensus 1 C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i 54 (66)
T PF00684_consen 1 CPKCNGTGAKPGK---------KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII 54 (66)
T ss_dssp -CCCTTTSB-STT---------T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-
T ss_pred CCcCCCcccCCCC---------CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE
Confidence 8899999984221 13689999999988653 299999999763
No 106
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.86 E-value=0.0018 Score=66.72 Aligned_cols=46 Identities=33% Similarity=0.527 Sum_probs=39.5
Q ss_pred eceEEEEEcCCC--CCCCCEEEEccccCCCCCCCCCccEEEEEEeeccc
Q 011450 234 SKRSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ 280 (485)
Q Consensus 234 ~~k~l~V~IP~G--v~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~ 280 (485)
..+.+++.++|| +.+|+++++.|+|.+-.... .|||||..+|+-.+
T Consensus 277 dGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 277 DGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFPK 324 (337)
T ss_pred CCceEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcCC
Confidence 457899999999 99999999999999865554 99999999987443
No 107
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=96.63 E-value=0.0011 Score=71.70 Aligned_cols=66 Identities=33% Similarity=0.735 Sum_probs=36.7
Q ss_pred ccccCCCCCCCCCCcccCCCCCCCCeeeeee--------ecCCceeee-EeecccCCCCcEE-EeecccccCCCcee
Q 011450 166 DIRCGGTGAKSSNCIQSCKACWGRGGVLKTQ--------RTPFGLISQ-VSTCSKCGGDGKI-IIDHCRRCGGNGEV 232 (485)
Q Consensus 166 di~C~GtG~~~~~~~~~C~~C~G~G~~~~~~--------~~~~g~~~~-~~~C~~C~G~G~~-i~~~C~~C~G~G~v 232 (485)
|..|+|+|... .....|+.|+|+|..-... +..+-++.. ..+|+.|.|+|++ +...|+.|.|+|.+
T Consensus 5 C~~C~g~G~i~-v~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv 80 (715)
T COG1107 5 CPECGGKGKIV-VGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKV 80 (715)
T ss_pred ccccCCCceEe-eeeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeE
Confidence 45577776543 2345688888887652110 001111221 2478888888766 34567777777744
No 108
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.31 E-value=0.0032 Score=57.80 Aligned_cols=66 Identities=23% Similarity=0.432 Sum_probs=52.6
Q ss_pred ccCCCcchhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCC------ccHHHHHHHHHHHHhhhccccccchhc
Q 011450 41 AAGTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKS------PGAEEKFKEISSAYEVLSDDEKRSVYD 106 (485)
Q Consensus 41 ~~~~d~Y~iLgv~~~--As~~eIk~AYr~la~k~HPD~n~~------~~a~e~F~~I~~AYevLsDp~kR~~YD 106 (485)
...++||.++|.... ..++-.+.-|--..++.|||+... .-|.+.-.++++||.+|.||-+|+.|=
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yi 78 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYL 78 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 456799999977544 566666668899999999998431 236677889999999999999999995
No 109
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.58 E-value=0.0068 Score=57.12 Aligned_cols=53 Identities=38% Similarity=0.532 Sum_probs=46.6
Q ss_pred CCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC--------ccHHHHHHHHHHHHhhh
Q 011450 44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--------PGAEEKFKEISSAYEVL 96 (485)
Q Consensus 44 ~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~--------~~a~e~F~~I~~AYevL 96 (485)
.+.|.+|++...++..+|+++|+++...+|||+-.. ..+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999997431 35788999999999853
No 110
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=95.22 E-value=0.014 Score=63.56 Aligned_cols=44 Identities=32% Similarity=0.723 Sum_probs=34.7
Q ss_pred cccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEee---------------------cccccCCCceee
Q 011450 180 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID---------------------HCRRCGGNGEVQ 233 (485)
Q Consensus 180 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~---------------------~C~~C~G~G~v~ 233 (485)
+.+|+.|+|+|.+... ...|+.|+|+|+.-.. .|..|+|.|.+.
T Consensus 2 ~~~C~~C~g~G~i~v~----------~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~ 66 (715)
T COG1107 2 IKKCPECGGKGKIVVG----------EEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVT 66 (715)
T ss_pred CccccccCCCceEeee----------eeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEE
Confidence 4689999999987543 3579999999987210 299999999875
No 111
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=95.05 E-value=0.024 Score=49.63 Aligned_cols=38 Identities=34% Similarity=0.885 Sum_probs=30.4
Q ss_pred CcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe---------ecccccCCCce
Q 011450 179 CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII---------DHCRRCGGNGE 231 (485)
Q Consensus 179 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~---------~~C~~C~G~G~ 231 (485)
....|..|+|+|.. +|+.|+|.|.+.. ..|+.|+|.|.
T Consensus 40 ~~v~C~~C~GsG~~---------------~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk 86 (111)
T PLN03165 40 NTQPCFPCSGTGAQ---------------VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGS 86 (111)
T ss_pred cCCCCCCCCCCCCc---------------CCCCCcCcCeEEEEeCCcEEEEEECCCCCCcce
Confidence 45789999999961 6999999987643 24999999994
No 112
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=94.84 E-value=0.029 Score=57.18 Aligned_cols=44 Identities=18% Similarity=0.317 Sum_probs=35.4
Q ss_pred EEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChhHHHH
Q 011450 315 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 367 (485)
Q Consensus 315 ~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~q~~l 367 (485)
+.|.+|+|+..+.++++++.|- .||+|.+.|..-..+..+...+
T Consensus 235 i~i~~~~g~~~~~~l~~~~~~~---------~~l~v~~~v~~~~~~~r~~~~i 278 (288)
T KOG0715|consen 235 IMIVLPAGVRSADTLRFAGHGN---------DDLFVRLIVAKSPSFRREGKDI 278 (288)
T ss_pred EEeecCcccccccEEEEecCCc---------ceEEEEEEeccCcccccccCcc
Confidence 6789999999999999999863 2999999999877776444333
No 113
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=94.57 E-value=0.019 Score=54.18 Aligned_cols=63 Identities=30% Similarity=0.455 Sum_probs=49.7
Q ss_pred CcchhccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHHHHhhhccccccchhcc
Q 011450 45 DYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDR 107 (485)
Q Consensus 45 d~Y~iLgv~~~A--s~~eIk~AYr~la~k~HPD~n~~~~------a~e~F~~I~~AYevLsDp~kR~~YD~ 107 (485)
||+...|.++.+ ..+.++..|+.+++.||||+..... +.+.+..++.||.+|.||-+|+.|=.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l 72 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL 72 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 455566666654 4456899999999999999986432 44578899999999999999999964
No 114
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=94.13 E-value=0.048 Score=55.47 Aligned_cols=23 Identities=35% Similarity=0.892 Sum_probs=14.1
Q ss_pred EeecccCCCCcEEEeecccccCCCce
Q 011450 206 VSTCSKCGGDGKIIIDHCRRCGGNGE 231 (485)
Q Consensus 206 ~~~C~~C~G~G~~i~~~C~~C~G~G~ 231 (485)
...|..|+|+|.. .|.+|.|+|.
T Consensus 234 ~~~C~~C~G~G~~---~C~tC~grG~ 256 (406)
T KOG2813|consen 234 HDLCYMCHGRGIK---ECHTCKGRGK 256 (406)
T ss_pred cchhhhccCCCcc---cCCcccCCCC
Confidence 3567788887743 3555555553
No 115
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=93.86 E-value=0.04 Score=52.59 Aligned_cols=31 Identities=26% Similarity=0.677 Sum_probs=24.1
Q ss_pred cccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEe
Q 011450 180 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII 220 (485)
Q Consensus 180 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~ 220 (485)
..+|+.|+|+|.++.. ..+|+.|+|+|++-.
T Consensus 99 ~~~C~~C~G~G~~i~~----------~~~C~~C~G~G~v~~ 129 (186)
T TIGR02642 99 SCKCPRCRGTGLIQRR----------QRECDTCAGTGRFRP 129 (186)
T ss_pred CCcCCCCCCeeEEecC----------CCCCCCCCCccEEee
Confidence 5689999999987642 146999999998754
No 116
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=93.04 E-value=0.057 Score=54.92 Aligned_cols=26 Identities=35% Similarity=0.905 Sum_probs=19.6
Q ss_pred eecccCCCCcEEEeecccccCCCceeeec
Q 011450 207 STCSKCGGDGKIIIDHCRRCGGNGEVQSK 235 (485)
Q Consensus 207 ~~C~~C~G~G~~i~~~C~~C~G~G~v~~~ 235 (485)
..|+.|.|.|.+ +|.+|.|+|.+..-
T Consensus 246 ~~C~tC~grG~k---~C~TC~gtgsll~~ 271 (406)
T KOG2813|consen 246 KECHTCKGRGKK---PCTTCSGTGSLLNY 271 (406)
T ss_pred ccCCcccCCCCc---ccccccCccceeee
Confidence 369999999853 69999998865433
No 117
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=91.69 E-value=0.19 Score=54.35 Aligned_cols=25 Identities=32% Similarity=0.429 Sum_probs=22.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCc
Q 011450 56 ATLQEIKTSYRKLARKYHPDINKSP 80 (485)
Q Consensus 56 As~~eIk~AYr~la~k~HPD~n~~~ 80 (485)
.+.+++||||||..+..|||+-+..
T Consensus 400 Vtp~~VKKaYrKA~L~VHPDKlqq~ 424 (453)
T KOG0431|consen 400 VTPAQVKKAYRKAVLCVHPDKLQQK 424 (453)
T ss_pred cCHHHHHHHHHhhhheeCcccccCC
Confidence 5899999999999999999998644
No 118
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=82.66 E-value=2.5 Score=38.01 Aligned_cols=53 Identities=23% Similarity=0.265 Sum_probs=36.2
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhcccc
Q 011450 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100 (485)
Q Consensus 45 d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~ 100 (485)
.-..||||++.++.++|.+.|.+|-...+|++..+.-- =..|..|.|.|..+.
T Consensus 59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfYL---QSKV~rAKErl~~El 111 (127)
T PF03656_consen 59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGGSFYL---QSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-HHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCHHH---HHHHHHHHHHHHHHH
Confidence 44689999999999999999999999999998743211 136777888876443
No 119
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=82.43 E-value=1.2 Score=46.01 Aligned_cols=52 Identities=40% Similarity=0.596 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCC-----CccHHHHHHHHHHHHhhhccccccchhcc
Q 011450 56 ATLQEIKTSYRKLARKYHPDINK-----SPGAEEKFKEISSAYEVLSDDEKRSVYDR 107 (485)
Q Consensus 56 As~~eIk~AYr~la~k~HPD~n~-----~~~a~e~F~~I~~AYevLsDp~kR~~YD~ 107 (485)
++..+|+.+|+..++..||+.-. .-..++.|+.|.+||++|.+.++|..+|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~ 60 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS 60 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence 67889999999999999999873 22456779999999999999777766665
No 120
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=81.61 E-value=2.4 Score=40.83 Aligned_cols=38 Identities=26% Similarity=0.518 Sum_probs=30.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhc
Q 011450 53 RQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS 97 (485)
Q Consensus 53 ~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLs 97 (485)
+++||.|||.+|+.++..+|--| ++.-.+|-.||+.+-
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd-------~~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD-------EKSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHH
Confidence 57999999999999999998433 344567999998543
No 121
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=77.81 E-value=2.4 Score=42.75 Aligned_cols=25 Identities=40% Similarity=0.795 Sum_probs=14.8
Q ss_pred ecccCCCCcEEEe--------ecccccCCCcee
Q 011450 208 TCSKCGGDGKIII--------DHCRRCGGNGEV 232 (485)
Q Consensus 208 ~C~~C~G~G~~i~--------~~C~~C~G~G~v 232 (485)
+|..|+|.-++.. ..|..|+-+|.+
T Consensus 242 pC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLv 274 (281)
T KOG2824|consen 242 PCSNCHGSCKVHEEEEDDGGVLRCLECNENGLV 274 (281)
T ss_pred ecCCCCCceeeeeeccCCCcEEECcccCCCCce
Confidence 4666666666555 126666666654
No 122
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=76.80 E-value=3.1 Score=38.26 Aligned_cols=37 Identities=38% Similarity=0.872 Sum_probs=23.1
Q ss_pred ccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEee---------cccccCCCcee
Q 011450 181 QSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID---------HCRRCGGNGEV 232 (485)
Q Consensus 181 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~---------~C~~C~G~G~v 232 (485)
..|..|.|.+.+ +|..|+|+-+++.. .|+.|+-.|.+
T Consensus 100 ~~C~~Cgg~rfv---------------~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~ 145 (147)
T cd03031 100 GVCEGCGGARFV---------------PCSECNGSCKVFAENATAAGGFLRCPECNENGLV 145 (147)
T ss_pred CCCCCCCCcCeE---------------ECCCCCCcceEEeccCcccccEEECCCCCccccc
Confidence 346777666543 57777777665432 37888777754
No 123
>PF13446 RPT: A repeated domain in UCH-protein
Probab=71.40 E-value=7.1 Score=30.14 Aligned_cols=44 Identities=14% Similarity=0.320 Sum_probs=31.8
Q ss_pred CcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhcc
Q 011450 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSD 98 (485)
Q Consensus 45 d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsD 98 (485)
+-|+.|||+++++.+.|-.+|+.... -.|+ ......+|..++.+
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-~~P~---------~~~~~r~AL~~Ia~ 49 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVN-DDPS---------QKDTLREALRVIAE 49 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHH-cChH---------hHHHHHHHHHHHHH
Confidence 45999999999999999999998776 1221 22445566666653
No 124
>TIGR00310 ZPR1_znf ZPR1 zinc finger domain.
Probab=71.02 E-value=17 Score=34.99 Aligned_cols=76 Identities=22% Similarity=0.399 Sum_probs=41.6
Q ss_pred cCCCCCCCCeeee-eee-cC-Ccee-eeEeecccCCCCcEEEeec-------------ccccCCCceee------eceEE
Q 011450 182 SCKACWGRGGVLK-TQR-TP-FGLI-SQVSTCSKCGGDGKIIIDH-------------CRRCGGNGEVQ------SKRSM 238 (485)
Q Consensus 182 ~C~~C~G~G~~~~-~~~-~~-~g~~-~~~~~C~~C~G~G~~i~~~-------------C~~C~G~G~v~------~~k~l 238 (485)
.|+.|++.|.... ... +| |+-+ .+...|+.|+-+-.-+... ...=-.+-+++ .--.|
T Consensus 2 ~Cp~C~~~~~~~~~~~~~IP~F~evii~sf~C~~CGyr~~ev~~~g~~~p~r~~l~V~~~~DL~r~VvkS~tati~IPEl 81 (192)
T TIGR00310 2 DCPSCGGECETVMKTVNDIPYFGEVLETSTICEHCGYRSNDVKTLGAKEPKRYILKIDDEADLNRRVVKSESATIRIPEL 81 (192)
T ss_pred cCCCCCCCCEEEEEEEcCCCCcceEEEEEEECCCCCCccceeEECCCCCCEEEEEEECChhcccceEEEcCCcEEEccce
Confidence 5999999887533 233 33 4433 3346899997654333210 00000111221 11256
Q ss_pred EEEcCCC-CCCCCEEEEccc
Q 011450 239 KVVIPPG-VSNGATMQIRGE 257 (485)
Q Consensus 239 ~V~IP~G-v~dG~~Ir~~G~ 257 (485)
.+.|||| ...|..-.++|-
T Consensus 82 ~lei~pg~~~~G~iTTVEGl 101 (192)
T TIGR00310 82 GLDIEPGPTSGGFITNLEGV 101 (192)
T ss_pred EEEECCCccCCceEEeeHhH
Confidence 7788888 678887777653
No 125
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=65.33 E-value=4.3 Score=47.87 Aligned_cols=26 Identities=38% Similarity=0.813 Sum_probs=14.8
Q ss_pred cccCCCCcEEEe---------ecccccCCCceeee
Q 011450 209 CSKCGGDGKIII---------DHCRRCGGNGEVQS 234 (485)
Q Consensus 209 C~~C~G~G~~i~---------~~C~~C~G~G~v~~ 234 (485)
|+.|.|.|.+.. ..|+.|+|.++..+
T Consensus 739 C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e 773 (924)
T TIGR00630 739 CEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRE 773 (924)
T ss_pred CCCCccceEEEEEccCCCCcccCCCCcCCceeChH
Confidence 555555555542 24777777665433
No 126
>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins.
Probab=63.89 E-value=26 Score=32.67 Aligned_cols=75 Identities=23% Similarity=0.410 Sum_probs=39.0
Q ss_pred cCCCCCCCCeeee-eeecC-Ccee-eeEeecccCCCCcEEEeec---ccc--------c----CCCceee------eceE
Q 011450 182 SCKACWGRGGVLK-TQRTP-FGLI-SQVSTCSKCGGDGKIIIDH---CRR--------C----GGNGEVQ------SKRS 237 (485)
Q Consensus 182 ~C~~C~G~G~~~~-~~~~~-~g~~-~~~~~C~~C~G~G~~i~~~---C~~--------C----~G~G~v~------~~k~ 237 (485)
.|+.|+..|.... ...+| |+-+ .+...|+.|+-+-.-+..- .+. . -.+-+++ .--+
T Consensus 2 ~Cp~C~~~~~~~~~~~~IP~F~evii~sf~C~~CGyk~~ev~~~~~~~p~G~r~~l~V~~~~DL~r~VvkS~ta~i~IPE 81 (160)
T smart00709 2 DCPSCGGNGTTRMLLTSIPYFREVIIMSFECEHCGYRNNEVKSGGAIEPKGTRITLKVESPEDLNRDVVKSETATISIPE 81 (160)
T ss_pred cCCCCCCCCEEEEEEecCCCcceEEEEEEECCCCCCccceEEECcccCCCceEEEEEECChhhccceEEEcCCcEEEeee
Confidence 5999998886422 22333 3332 2346899997654333210 000 0 0011111 1235
Q ss_pred EEEEcCCCCCCCCEEEEcc
Q 011450 238 MKVVIPPGVSNGATMQIRG 256 (485)
Q Consensus 238 l~V~IP~Gv~dG~~Ir~~G 256 (485)
+.+.||||...|..-.++|
T Consensus 82 l~~ei~pg~~~g~itTVEG 100 (160)
T smart00709 82 LDLEIPPGPLGGFITTVEG 100 (160)
T ss_pred eeEEecCCCCCcEEEehHH
Confidence 6777777777777777765
No 127
>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins.
Probab=62.22 E-value=36 Score=31.81 Aligned_cols=26 Identities=23% Similarity=0.411 Sum_probs=18.8
Q ss_pred ceEEEEccCCeEEEEeCCCCCCCCEEEEcC
Q 011450 304 TSMEVETVEGMKDLRIPSGVQPGDTVKLQQ 333 (485)
Q Consensus 304 ~~i~V~tldG~~~l~Ip~g~q~G~~irl~g 333 (485)
+++.||- +.+.||||.+.|..-.|.|
T Consensus 75 a~i~IPE----l~~ei~pg~~~g~itTVEG 100 (160)
T smart00709 75 ATISIPE----LDLEIPPGPLGGFITTVEG 100 (160)
T ss_pred cEEEeee----eeEEecCCCCCcEEEehHH
Confidence 3456664 4688999888888877765
No 128
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=61.39 E-value=23 Score=28.91 Aligned_cols=45 Identities=20% Similarity=0.236 Sum_probs=33.3
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHH
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFK 87 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~ 87 (485)
.+|.-++.|+++-|+..||+.|-++..+|..=-..|+....+.|.
T Consensus 2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~~n~~AFe 46 (88)
T COG5552 2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSAANAEAFE 46 (88)
T ss_pred ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcchhhHHHHH
Confidence 466778899999999999999999888887544444433344444
No 129
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=59.28 E-value=5.4 Score=47.12 Aligned_cols=34 Identities=26% Similarity=0.477 Sum_probs=16.6
Q ss_pred cCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEE
Q 011450 182 SCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKI 218 (485)
Q Consensus 182 ~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~ 218 (485)
.|+.|+|.|.+.... .|- .....+|+.|+|+...
T Consensus 738 ~C~~C~G~G~~~~~~--~f~-~~~~~~C~~C~G~R~~ 771 (924)
T TIGR00630 738 RCEACQGDGVIKIEM--HFL-PDVYVPCEVCKGKRYN 771 (924)
T ss_pred CCCCCccceEEEEEc--cCC-CCcccCCCCcCCceeC
Confidence 466666666654321 110 0112466666666543
No 130
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=58.28 E-value=6.7 Score=46.45 Aligned_cols=33 Identities=33% Similarity=0.697 Sum_probs=19.4
Q ss_pred ecccCCCCcEEEe---------ecccccCCCceeeeceEEEEEc
Q 011450 208 TCSKCGGDGKIII---------DHCRRCGGNGEVQSKRSMKVVI 242 (485)
Q Consensus 208 ~C~~C~G~G~~i~---------~~C~~C~G~G~v~~~k~l~V~I 242 (485)
.|+.|.|.|.+.. ..|+.|+|.....+ .++|.+
T Consensus 740 ~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e--~l~v~~ 781 (943)
T PRK00349 740 RCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRE--TLEVKY 781 (943)
T ss_pred CCCcccccceEEEEeccCCCccccCccccCcccccc--ceEEEE
Confidence 4666666666543 23888888776543 344444
No 131
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=55.50 E-value=9.2 Score=45.33 Aligned_cols=12 Identities=33% Similarity=1.057 Sum_probs=8.7
Q ss_pred ccccCCCceeee
Q 011450 223 CRRCGGNGEVQS 234 (485)
Q Consensus 223 C~~C~G~G~v~~ 234 (485)
|+.|.|.|++..
T Consensus 741 C~~C~G~G~~~~ 752 (943)
T PRK00349 741 CEACQGDGVIKI 752 (943)
T ss_pred CCcccccceEEE
Confidence 788888777653
No 132
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=52.33 E-value=12 Score=43.36 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=13.3
Q ss_pred cEEEEEEEEcCCC-CChhH-HHHHHHHHhhc
Q 011450 347 DHLFIVNVLIPKD-ISDPE-RALVEEIAFLK 375 (485)
Q Consensus 347 DL~V~~~V~~P~~-ls~~q-~~ll~~l~~~~ 375 (485)
-||| +.-|+. |..++ +.||+-|..+-
T Consensus 845 TlYi---LDEPTTGLH~~Di~kLl~VL~rLv 872 (935)
T COG0178 845 TLYI---LDEPTTGLHFDDIKKLLEVLHRLV 872 (935)
T ss_pred eEEE---eCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4554 455653 65444 34555555554
No 133
>TIGR00340 zpr1_rel ZPR1-related zinc finger protein. A model ZPR1_znf (TIGR00310) has been created to describe the domain shared by this protein and ZPR1.
Probab=50.46 E-value=37 Score=31.82 Aligned_cols=34 Identities=32% Similarity=0.576 Sum_probs=20.4
Q ss_pred CCCCCCCCeeee--eeecC-Ccee-eeEeecccCCCCc
Q 011450 183 CKACWGRGGVLK--TQRTP-FGLI-SQVSTCSKCGGDG 216 (485)
Q Consensus 183 C~~C~G~G~~~~--~~~~~-~g~~-~~~~~C~~C~G~G 216 (485)
||.|++.+.... ...+| |+-+ .+...|+.|+-+-
T Consensus 1 CP~Cg~~~~~~~~~~~~IP~F~evii~sf~C~~CGyr~ 38 (163)
T TIGR00340 1 CPVCGSRTLKAVTYDYDIPYFGKIMLSTYICEKCGYRS 38 (163)
T ss_pred CCCCCCcceEeeeEeccCCCcceEEEEEEECCCCCCch
Confidence 899998865442 23333 3433 3346899997653
No 134
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=50.31 E-value=11 Score=37.56 Aligned_cols=18 Identities=28% Similarity=0.619 Sum_probs=14.1
Q ss_pred CcccCCCCCCCCeeeeee
Q 011450 179 CIQSCKACWGRGGVLKTQ 196 (485)
Q Consensus 179 ~~~~C~~C~G~G~~~~~~ 196 (485)
.-.+||+|+|+|++.+.+
T Consensus 37 ~~vtCPTCqGtGrIP~eq 54 (238)
T PF07092_consen 37 DSVTCPTCQGTGRIPREQ 54 (238)
T ss_pred CCCcCCCCcCCccCCccc
Confidence 346899999999976654
No 135
>TIGR00340 zpr1_rel ZPR1-related zinc finger protein. A model ZPR1_znf (TIGR00310) has been created to describe the domain shared by this protein and ZPR1.
Probab=50.05 E-value=59 Score=30.51 Aligned_cols=26 Identities=12% Similarity=0.337 Sum_probs=18.1
Q ss_pred ceEEEEccCCeEEEEeCCCC-CCCCEEEEcC
Q 011450 304 TSMEVETVEGMKDLRIPSGV-QPGDTVKLQQ 333 (485)
Q Consensus 304 ~~i~V~tldG~~~l~Ip~g~-q~G~~irl~g 333 (485)
+++.||- +.+.||||. +.|..=.|.|
T Consensus 72 a~i~IPE----l~lei~pg~~~~G~iTTVEG 98 (163)
T TIGR00340 72 ATIRIPE----LGIKIEPGPASQGYISNIEG 98 (163)
T ss_pred cEEEccc----eeEEecCCCcCCceEEehHh
Confidence 3455664 468999987 6777777755
No 136
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=48.79 E-value=11 Score=47.49 Aligned_cols=24 Identities=0% Similarity=-0.050 Sum_probs=14.4
Q ss_pred ccEEEEEEEEcCCC-CChhHHHHHHHHH
Q 011450 346 GDHLFIVNVLIPKD-ISDPERALVEEIA 372 (485)
Q Consensus 346 GDL~V~~~V~~P~~-ls~~q~~ll~~l~ 372 (485)
+.||| +.-|+. |...+.+.|.++.
T Consensus 1721 ~~lyi---lDEPt~GLh~~d~~~Ll~~l 1745 (1809)
T PRK00635 1721 PTLFL---LDEIATSLDNQQKSALLVQL 1745 (1809)
T ss_pred CcEEE---EcCCCCCCCHHHHHHHHHHH
Confidence 35554 566764 8877765554443
No 137
>PRK12336 translation initiation factor IF-2 subunit beta; Provisional
Probab=48.76 E-value=68 Score=30.98 Aligned_cols=14 Identities=21% Similarity=0.259 Sum_probs=8.8
Q ss_pred cccCCCCCCCCeee
Q 011450 180 IQSCKACWGRGGVL 193 (485)
Q Consensus 180 ~~~C~~C~G~G~~~ 193 (485)
-..|+.|+-.-..+
T Consensus 98 yV~C~~C~~pdT~l 111 (201)
T PRK12336 98 YVICSECGLPDTRL 111 (201)
T ss_pred eEECCCCCCCCcEE
Confidence 35688887765443
No 138
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=45.95 E-value=11 Score=20.70 Aligned_cols=13 Identities=54% Similarity=0.902 Sum_probs=10.7
Q ss_pred HHHHHHHHHhhhc
Q 011450 85 KFKEISSAYEVLS 97 (485)
Q Consensus 85 ~F~~I~~AYevLs 97 (485)
+|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5788999998874
No 139
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=45.26 E-value=26 Score=35.58 Aligned_cols=49 Identities=24% Similarity=0.568 Sum_probs=32.0
Q ss_pred cCCCCCCCCCCcccCCCCCCCCeeeeeeecCCceeeeEeecccCCCCcEEEeecccccC
Q 011450 169 CGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCG 227 (485)
Q Consensus 169 C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~ 227 (485)
|.+-| +..-..|..|+|+=.+... .........|..|+-.|-+ .|+.|.
T Consensus 232 C~~CG---g~rFlpC~~C~GS~kv~~~----~~~~~~~~rC~~CNENGLv---rCp~Cs 280 (281)
T KOG2824|consen 232 CESCG---GARFLPCSNCHGSCKVHEE----EEDDGGVLRCLECNENGLV---RCPVCS 280 (281)
T ss_pred CCCcC---CcceEecCCCCCceeeeee----ccCCCcEEECcccCCCCce---eCCccC
Confidence 55554 2345789999998776542 1112224689999999955 488775
No 140
>PF11181 YflT: Heat induced stress protein YflT
Probab=44.52 E-value=7.3 Score=33.33 Aligned_cols=27 Identities=26% Similarity=0.639 Sum_probs=19.6
Q ss_pred CCCChHHHHHHhhcCCCc--ccceeeeec
Q 011450 410 SVGSWWNSVKCFLGQRQS--QERFASVGV 436 (485)
Q Consensus 410 ~~~~~~~~~k~~~~~~~~--~~~~~s~~~ 436 (485)
...+||++++|||.++.. +++|.++..
T Consensus 54 ~~~~~~d~~~~~f~~~~d~~~~~l~~lGl 82 (103)
T PF11181_consen 54 SEESFWDKIKNFFTSGGDELRSKLESLGL 82 (103)
T ss_pred ccccHHHHHHHhccCCcHHHHHHHHHcCC
Confidence 358999999999993332 377777654
No 141
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=43.49 E-value=84 Score=25.81 Aligned_cols=46 Identities=22% Similarity=0.164 Sum_probs=34.4
Q ss_pred CCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Q 011450 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKE 88 (485)
Q Consensus 43 ~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~ 88 (485)
++|--.+-|+.|.||.+||..|-.+..+|.-=-..|+....+.|..
T Consensus 2 CRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~ 47 (78)
T PF10041_consen 2 CRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDR 47 (78)
T ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHH
Confidence 4555667789999999999999999999986666655444555543
No 142
>TIGR03655 anti_R_Lar restriction alleviation protein, Lar family. Restriction alleviation proteins provide a countermeasure to host cell restriction enzyme defense against foreign DNA such as phage or plasmids. This family consists of homologs to the phage antirestriction protein Lar, and most members belong to phage genomes or prophage regions of bacterial genomes.
Probab=40.45 E-value=43 Score=25.09 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=10.3
Q ss_pred ccCCCCCCCCeeee
Q 011450 181 QSCKACWGRGGVLK 194 (485)
Q Consensus 181 ~~C~~C~G~G~~~~ 194 (485)
..||.|+|....++
T Consensus 2 kPCPfCGg~~~~~~ 15 (53)
T TIGR03655 2 KPCPFCGGADVYLR 15 (53)
T ss_pred CCCCCCCCcceeeE
Confidence 46999998877443
No 143
>COG1326 Uncharacterized archaeal Zn-finger protein [General function prediction only]
Probab=40.44 E-value=1.7e+02 Score=28.34 Aligned_cols=76 Identities=12% Similarity=0.208 Sum_probs=43.1
Q ss_pred ceEEEEEcCCC--CCCCCEEEEccccCCCCCCCCCccEEEEEEeeccccccc-cccceEEEEEecch-hhccCceEEEEc
Q 011450 235 KRSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHR-DGLNLFSKISVDYT-EAILGTSMEVET 310 (485)
Q Consensus 235 ~k~l~V~IP~G--v~dG~~Ir~~G~Gd~~~~g~~~GDL~v~I~v~~h~~F~R-~G~DL~~~~~Isl~-eAllG~~i~V~t 310 (485)
..+-.|.+||| ++-|+.|.+.++- =.+-.|.+.+-+.-.+ ...||.+-...|+. .+-.|.++..+.
T Consensus 62 S~~~~vel~~gE~l~vGDei~vd~e~----------veITSIE~~~gkRV~~A~veeIeTVWgrsl~~p~~vgvSi~~~~ 131 (201)
T COG1326 62 SFTKEVELDPGETLKVGDEIEVDGEE----------VEITSIELGGGKRVKSAKVEEIETVWGRSLVIPVEVGVSIHLKG 131 (201)
T ss_pred ccceeEecCCCCeEecCCEEEEcCCE----------EEEEEEeeCCCccccccccceeeeEeeecccCccEEEEEEecCC
Confidence 45667889999 8899999998762 1223333333333333 56777777666543 345555555554
Q ss_pred cCCeEEEEeC
Q 011450 311 VEGMKDLRIP 320 (485)
Q Consensus 311 ldG~~~l~Ip 320 (485)
.--.+++.+|
T Consensus 132 ~t~s~kv~Vp 141 (201)
T COG1326 132 KTYSIKVVVP 141 (201)
T ss_pred ceEEEEEEcC
Confidence 1111345554
No 144
>PF03589 Antiterm: Antitermination protein; InterPro: IPR003222 This entry consists of antitermination proteins found in bacteriophages, such as protein Q from phage lambda, and some bacterial homologues. Protein Q positively regulates expression of the phage late gene operon by binding to the bacterial host RNA polymerase (RNAP) and modifying it. The modified RNAP transcribes through termination sites that otherwise prevent expression of the regulated genes [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent
Probab=35.89 E-value=12 Score=31.95 Aligned_cols=14 Identities=43% Similarity=1.013 Sum_probs=9.7
Q ss_pred ccCCCCCCCCeeee
Q 011450 181 QSCKACWGRGGVLK 194 (485)
Q Consensus 181 ~~C~~C~G~G~~~~ 194 (485)
..|..|+|.|.++.
T Consensus 6 ~~c~~c~g~g~al~ 19 (95)
T PF03589_consen 6 DSCRRCAGDGAALD 19 (95)
T ss_pred CCcCccCCcceecc
Confidence 45778888886543
No 145
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=35.69 E-value=19 Score=45.51 Aligned_cols=28 Identities=36% Similarity=0.603 Sum_probs=19.6
Q ss_pred ecccCCCCcEEEee---------cccccCCCceeeec
Q 011450 208 TCSKCGGDGKIIID---------HCRRCGGNGEVQSK 235 (485)
Q Consensus 208 ~C~~C~G~G~~i~~---------~C~~C~G~G~v~~~ 235 (485)
.|+.|.|.|.+..+ .|..|+|..+-.+.
T Consensus 1609 rC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~~e~ 1645 (1809)
T PRK00635 1609 QCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQPLA 1645 (1809)
T ss_pred CCCCCccCceEEEecccCCCcccCCCCCCCcCCCHHH
Confidence 48888888876432 38888888765443
No 146
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=34.05 E-value=35 Score=39.78 Aligned_cols=31 Identities=35% Similarity=0.847 Sum_probs=18.7
Q ss_pred ecccCCCCcEEEee---------cccccCCCceeeeceEEEE
Q 011450 208 TCSKCGGDGKIIID---------HCRRCGGNGEVQSKRSMKV 240 (485)
Q Consensus 208 ~C~~C~G~G~~i~~---------~C~~C~G~G~v~~~k~l~V 240 (485)
.|..|.|.|.+... .|..|+|+.+- .++|+|
T Consensus 732 RCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn--~EtLev 771 (935)
T COG0178 732 RCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYN--RETLEV 771 (935)
T ss_pred CCccccCCceEEEEeccCCCceeeCCCcCCcccc--cceEEE
Confidence 47777777766332 28888776653 334444
No 147
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=33.90 E-value=72 Score=28.00 Aligned_cols=45 Identities=24% Similarity=0.402 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCC-c----cHHHHHHHHHHHHhhhcc
Q 011450 54 QNATLQEIKTSYRKLARKYHPDINKS-P----GAEEKFKEISSAYEVLSD 98 (485)
Q Consensus 54 ~~As~~eIk~AYr~la~k~HPD~n~~-~----~a~e~F~~I~~AYevLsD 98 (485)
+..+..+++.|.|..-++.|||.-.. | ..++-++.++.-.+.|..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 45677889999999999999996532 2 234456666666666653
No 148
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=32.75 E-value=33 Score=30.31 Aligned_cols=20 Identities=35% Similarity=0.926 Sum_probs=15.2
Q ss_pred cccCCCCcEEEeecccccCC
Q 011450 209 CSKCGGDGKIIIDHCRRCGG 228 (485)
Q Consensus 209 C~~C~G~G~~i~~~C~~C~G 228 (485)
||.|++.=.+....|..|+-
T Consensus 1 CPvCg~~l~vt~l~C~~C~t 20 (113)
T PF09862_consen 1 CPVCGGELVVTRLKCPSCGT 20 (113)
T ss_pred CCCCCCceEEEEEEcCCCCC
Confidence 77888777777777888863
No 149
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=30.63 E-value=51 Score=21.69 Aligned_cols=17 Identities=24% Similarity=0.460 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHhCC
Q 011450 58 LQEIKTSYRKLARKYHP 74 (485)
Q Consensus 58 ~~eIk~AYr~la~k~HP 74 (485)
.++.|.+.|+.|+.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 47889999999999994
No 150
>KOG1673 consensus Ras GTPases [General function prediction only]
Probab=30.14 E-value=31 Score=32.39 Aligned_cols=56 Identities=29% Similarity=0.426 Sum_probs=42.8
Q ss_pred eccccccc-cccCCCCCcccccccccccCCCcchhc---cCCCCCCHHHHHHHHHHHHHHhCCC
Q 011450 16 LSTSFSFK-WNYCSGNNRSHRRGMIRAAGTDYYSTL---NVRQNATLQEIKTSYRKLARKYHPD 75 (485)
Q Consensus 16 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Y~iL---gv~~~As~~eIk~AYr~la~k~HPD 75 (485)
-++-|+|+ |++.+++ +...|+....+|--.|| ++.+-++..-|+.=||+ |+++.-.
T Consensus 65 ~~t~IsfSIwdlgG~~---~~~n~lPiac~dsvaIlFmFDLt~r~TLnSi~~WY~Q-Ar~~Nkt 124 (205)
T KOG1673|consen 65 RGTDISFSIWDLGGQR---EFINMLPIACKDSVAILFMFDLTRRSTLNSIKEWYRQ-ARGLNKT 124 (205)
T ss_pred cceEEEEEEEecCCcH---hhhccCceeecCcEEEEEEEecCchHHHHHHHHHHHH-HhccCCc
Confidence 36789999 9999876 45667777788877764 78888999999998875 5555433
No 151
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=29.84 E-value=61 Score=28.89 Aligned_cols=24 Identities=13% Similarity=0.223 Sum_probs=18.4
Q ss_pred eceEEEEEcCCCCCCCCEEEEccc
Q 011450 234 SKRSMKVVIPPGVSNGATMQIRGE 257 (485)
Q Consensus 234 ~~k~l~V~IP~Gv~dG~~Ir~~G~ 257 (485)
+...+++.-+.+++.||.+.+.-+
T Consensus 40 ~~~~~~~~~~~~~~~GD~V~v~i~ 63 (135)
T PF04246_consen 40 KPITFRAPNPIGAKVGDRVEVEIP 63 (135)
T ss_pred CcEEEEecCCCCCCCCCEEEEEec
Confidence 346777788888999998887644
No 152
>TIGR00310 ZPR1_znf ZPR1 zinc finger domain.
Probab=29.35 E-value=3.2e+02 Score=26.34 Aligned_cols=26 Identities=19% Similarity=0.326 Sum_probs=19.5
Q ss_pred ceEEEEccCCeEEEEeCCC-CCCCCEEEEcC
Q 011450 304 TSMEVETVEGMKDLRIPSG-VQPGDTVKLQQ 333 (485)
Q Consensus 304 ~~i~V~tldG~~~l~Ip~g-~q~G~~irl~g 333 (485)
+++.||- +.+.|||| ++.|..-.|.|
T Consensus 74 ati~IPE----l~lei~pg~~~~G~iTTVEG 100 (192)
T TIGR00310 74 ATIRIPE----LGLDIEPGPTSGGFITNLEG 100 (192)
T ss_pred cEEEccc----eEEEECCCccCCceEEeeHh
Confidence 3455664 47899999 68899888866
No 153
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=28.29 E-value=71 Score=24.94 Aligned_cols=28 Identities=21% Similarity=0.217 Sum_probs=24.1
Q ss_pred EEEEEcCCCCChhHHHHHHHHHhhcCCC
Q 011450 351 IVNVLIPKDISDPERALVEEIAFLKSPG 378 (485)
Q Consensus 351 ~~~V~~P~~ls~~q~~ll~~l~~~~~~~ 378 (485)
.....||..||++||..+..++....-.
T Consensus 17 ~~eL~Fp~~ls~~eRriih~la~~lGL~ 44 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLLASRLGLN 44 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHHHHHcCCc
Confidence 5678899999999999999999877543
No 154
>PF05017 TMP: TMP repeat; InterPro: IPR007713 This short repeat consists of the motif WXXh where X can be any residue and h is a hydrophobic residue. The repeat is named TMP after its occurrence in the tape measure protein (TMP). Tape measure protein is a component of phage tail and probably forms a beta-helix. Truncated forms of TMP lead to shortened tail fibres []. This repeat is also found in non-phage proteins where it may play a structural role.
Probab=27.75 E-value=26 Score=18.08 Aligned_cols=10 Identities=40% Similarity=1.105 Sum_probs=7.8
Q ss_pred HHHHHHhhcC
Q 011450 415 WNSVKCFLGQ 424 (485)
Q Consensus 415 ~~~~k~~~~~ 424 (485)
|+.||++|.+
T Consensus 1 Wn~Ik~~~s~ 10 (11)
T PF05017_consen 1 WNGIKSFFSG 10 (11)
T ss_pred CchHHHHhhc
Confidence 7888888864
No 155
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=25.51 E-value=1.6e+02 Score=26.92 Aligned_cols=73 Identities=15% Similarity=0.182 Sum_probs=60.4
Q ss_pred ceEEEEEecchhhccCceEEEEccCCeE-EEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChh
Q 011450 288 NLFSKISVDYTEAILGTSMEVETVEGMK-DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDP 363 (485)
Q Consensus 288 DL~~~~~Isl~eAllG~~i~V~tldG~~-~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~ 363 (485)
++.....++..+++.+....+....... ...++.+...+..+++.+.+.... +..|+.+.++.+.....+..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 223 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR---GALGKARLKELSKRHPPFALE 223 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC---CCcccceeeeeccCCCCcccc
Confidence 6788888999999999988888777754 368999999999999999998764 468999999999887765544
No 156
>KOG3415 consensus Putative Rab5-interacting protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.51 E-value=50 Score=29.17 Aligned_cols=21 Identities=33% Similarity=0.455 Sum_probs=14.3
Q ss_pred CCchhhhHHHHHHHhhhhhhhcc
Q 011450 447 PDSFLMASVVTVFMITSIFNTVG 469 (485)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~ 469 (485)
-||| |+|. ++||+|||+-+..
T Consensus 105 kEGf-~asf-a~FlvtWIi~Yt~ 125 (129)
T KOG3415|consen 105 KEGF-MASF-ALFLVTWIIFYTL 125 (129)
T ss_pred HHHH-HHHH-HHHHHHHHHHHhh
Confidence 3444 5554 5999999987653
No 157
>COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair]
Probab=25.40 E-value=1.1e+03 Score=27.29 Aligned_cols=15 Identities=20% Similarity=0.457 Sum_probs=9.3
Q ss_pred CCChhHHHHHHHHHh
Q 011450 359 DISDPERALVEEIAF 373 (485)
Q Consensus 359 ~ls~~q~~ll~~l~~ 373 (485)
.+++++.+.+.+|++
T Consensus 258 ~~t~ed~e~i~elak 272 (682)
T COG1241 258 EITEEDEEEIKELAK 272 (682)
T ss_pred cCCHHHHHHHHHHhc
Confidence 466777666666654
No 158
>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length. Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.
Probab=24.32 E-value=51 Score=30.38 Aligned_cols=16 Identities=19% Similarity=0.349 Sum_probs=8.5
Q ss_pred CCCCCCCcccCCCCCC
Q 011450 173 GAKSSNCIQSCKACWG 188 (485)
Q Consensus 173 G~~~~~~~~~C~~C~G 188 (485)
|...+...-.|..|+-
T Consensus 105 GE~~g~G~l~C~~Cg~ 120 (146)
T PF07295_consen 105 GEVVGPGTLVCENCGH 120 (146)
T ss_pred CcEecCceEecccCCC
Confidence 3333444556777754
No 159
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=23.96 E-value=3.5e+02 Score=26.30 Aligned_cols=85 Identities=21% Similarity=0.281 Sum_probs=56.3
Q ss_pred ccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEEEcCCCCCCCCCCCCCccEEEEEEEEcCCCCChh
Q 011450 284 RDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDP 363 (485)
Q Consensus 284 R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~irl~g~G~P~~~~~~~rGDL~V~~~V~~P~~ls~~ 363 (485)
|--.||.+++-.+=.|-+-|++..|.-..|...|++|+ |+.+-.++.-+... .|-.||-=+-.|--.=--.-...
T Consensus 113 ~lrtdls~tlfl~DPedYdGGeLVv~dtYg~h~VklPA----GdLVlypStSlH~V-tPVTRg~R~asffW~qslir~d~ 187 (229)
T COG3128 113 RLRTDLSCTLFLSDPEDYDGGELVVNDTYGNHRVKLPA----GDLVLYPSTSLHEV-TPVTRGERFASFFWIQSLIRDDK 187 (229)
T ss_pred eeEeeeeeeeecCCccccCCceEEEeccccceEEeccC----CCEEEcccccceec-cccccCceEEEeeehHHHhhhhH
Confidence 66778999999998999999999999999988999998 66666676655432 23446654433321111112344
Q ss_pred HHHHHHHHHh
Q 011450 364 ERALVEEIAF 373 (485)
Q Consensus 364 q~~ll~~l~~ 373 (485)
+|.+|-++..
T Consensus 188 ~r~~l~e~d~ 197 (229)
T COG3128 188 KRALLFELDK 197 (229)
T ss_pred HHHHHHHHHH
Confidence 5666666544
No 160
>PF13677 MotB_plug: Membrane MotB of proton-channel complex MotA/MotB
Probab=23.30 E-value=63 Score=24.85 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=16.4
Q ss_pred hhhHHHHHHHhhhhhhhcccc
Q 011450 451 LMASVVTVFMITSIFNTVGKT 471 (485)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~ 471 (485)
||+.+|++||+-+++..+.+.
T Consensus 24 lmTLLl~fFVlL~s~s~~d~~ 44 (58)
T PF13677_consen 24 LMTLLLAFFVLLFSMSSVDKE 44 (58)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 788889999998887776543
No 161
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=23.04 E-value=1.1e+02 Score=26.86 Aligned_cols=42 Identities=26% Similarity=0.459 Sum_probs=29.8
Q ss_pred EEeCCCCCCCCEEEEcCCCCCCCCC-----CCCCccEEEEEEEEcCC
Q 011450 317 LRIPSGVQPGDTVKLQQMGVPDINN-----PSVRGDHLFIVNVLIPK 358 (485)
Q Consensus 317 l~Ip~g~q~G~~irl~g~G~P~~~~-----~~~rGDL~V~~~V~~P~ 358 (485)
..||.++++|+.+.|.|.=.+.... ....+|+.++|++.+++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 4688889999999999874432211 11237899999988875
No 162
>PF03367 zf-ZPR1: ZPR1 zinc-finger domain; InterPro: IPR004457 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents ZPR1-type zinc finger domains. An orthologous protein found once in each of the completed archaeal genomes corresponds to a zinc finger-containing domain repeated as the N-terminal and C-terminal halves of the mouse protein ZPR1. ZPR1 is an experimentally proven zinc-binding protein that binds the tyrosine kinase domain of the epidermal growth factor receptor (EGFR); binding is inhibited by EGF stimulation and tyrosine phosphorylation, and activation by EGF is followed by some redistribution of ZPR1 to the nucleus. By analogy, other proteins with the ZPR1 zinc finger domain may be regulatory proteins that sense protein phosphorylation state and/or participate in signal transduction (see also IPR004470 from INTERPRO). Deficiencies in ZPR1 may contribute to neurodegenerative disorders. ZPR1 appears to be down-regulated in patients with spinal muscular atrophy (SMA), a disease characterised by degeneration of the alpha-motor neurons in the spinal cord that can arise from mutations affecting the expression of Survival Motor Neurons (SMN) []. ZPR1 interacts with complexes formed by SMN [], and may act as a modifier that effects the severity of SMA. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 2QKD_A.
Probab=22.88 E-value=2.3e+02 Score=26.35 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=15.9
Q ss_pred ccCCCCCCCCeeee-eeecC-Cceee-eEeecccCCC
Q 011450 181 QSCKACWGRGGVLK-TQRTP-FGLIS-QVSTCSKCGG 214 (485)
Q Consensus 181 ~~C~~C~G~G~~~~-~~~~~-~g~~~-~~~~C~~C~G 214 (485)
..|+.|+..|.... ...+| |+.+. +...|+.|+-
T Consensus 2 s~Cp~C~~~~~~~~~~~~IP~F~evii~sf~C~~CGy 38 (161)
T PF03367_consen 2 SLCPNCGENGTTRILLTDIPYFKEVIIMSFECEHCGY 38 (161)
T ss_dssp EE-TTTSSCCEEEEEEEEETTTEEEEEEEEE-TTT--
T ss_pred CcCCCCCCCcEEEEEEEcCCCCceEEEEEeECCCCCC
Confidence 46999999996532 22333 33222 2346666643
No 163
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=22.70 E-value=99 Score=31.31 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=32.0
Q ss_pred EEEEecchhhccC-ceEEEEccCCeE-EEEeCCC-----CCCCCEEEEcC
Q 011450 291 SKISVDYTEAILG-TSMEVETVEGMK-DLRIPSG-----VQPGDTVKLQQ 333 (485)
Q Consensus 291 ~~~~Isl~eAllG-~~i~V~tldG~~-~l~Ip~g-----~q~G~~irl~g 333 (485)
++.+|-|+||+.| +..+|++.|+.+ .|.|.|. +.-.+.+||-.
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD 67 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYD 67 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEE
Confidence 3568999999999 678999999986 6787653 33456666643
No 164
>PRK12380 hydrogenase nickel incorporation protein HybF; Provisional
Probab=22.28 E-value=1.6e+02 Score=25.80 Aligned_cols=24 Identities=25% Similarity=0.567 Sum_probs=11.1
Q ss_pred eecccCCCCcEEEe--ecccccCCCc
Q 011450 207 STCSKCGGDGKIII--DHCRRCGGNG 230 (485)
Q Consensus 207 ~~C~~C~G~G~~i~--~~C~~C~G~G 230 (485)
..|..|+....... ..|+.|++..
T Consensus 71 ~~C~~Cg~~~~~~~~~~~CP~Cgs~~ 96 (113)
T PRK12380 71 AWCWDCSQVVEIHQHDAQCPHCHGER 96 (113)
T ss_pred EEcccCCCEEecCCcCccCcCCCCCC
Confidence 35666653332211 1266666543
No 165
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=22.19 E-value=39 Score=33.59 Aligned_cols=11 Identities=55% Similarity=1.359 Sum_probs=5.8
Q ss_pred ecccCCCCcEE
Q 011450 208 TCSKCGGDGKI 218 (485)
Q Consensus 208 ~C~~C~G~G~~ 218 (485)
+||.|.|+|++
T Consensus 40 tCPTCqGtGrI 50 (238)
T PF07092_consen 40 TCPTCQGTGRI 50 (238)
T ss_pred cCCCCcCCccC
Confidence 45555555544
No 166
>PF10080 DUF2318: Predicted membrane protein (DUF2318); InterPro: IPR018758 This domain of unknown function is found in hypothetical bacterial membrane proteins with no known function.
Probab=21.72 E-value=1.5e+02 Score=25.61 Aligned_cols=22 Identities=32% Similarity=0.874 Sum_probs=16.8
Q ss_pred EeecccCCCCcEEEee---cccccC
Q 011450 206 VSTCSKCGGDGKIIID---HCRRCG 227 (485)
Q Consensus 206 ~~~C~~C~G~G~~i~~---~C~~C~ 227 (485)
...|.-|.++|..... .|..|.
T Consensus 35 ~daCeiC~~~GY~q~g~~lvC~~C~ 59 (102)
T PF10080_consen 35 FDACEICGPKGYYQEGDQLVCKNCG 59 (102)
T ss_pred EEeccccCCCceEEECCEEEEecCC
Confidence 4689999888888654 388886
No 167
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=21.43 E-value=15 Score=35.91 Aligned_cols=58 Identities=36% Similarity=0.579 Sum_probs=43.9
Q ss_pred cCCCcchhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHhhhccccccchhcccccc
Q 011450 42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA 111 (485)
Q Consensus 42 ~~~d~Y~iLgv~~~As~~eIk~AYr~la~k~HPD~n~~~~a~e~F~~I~~AYevLsDp~kR~~YD~~G~~ 111 (485)
...+||++||+...++.. .++|+ |.+..+. .+.|..+..+...|.++ +|..||..+..
T Consensus 96 ~~~~~~~~~g~~~~~~~~--~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 153 (306)
T KOG0714|consen 96 PDKDFYEFFGVSSPFSGS--KKGYR--------DKNAAPG-EEAFKSEGKAFQSLYGP-KRKQYDSSGSD 153 (306)
T ss_pred hhhhHHHHhCCCCCCccc--cccCC--------ccccccC-ccccccccccccccCCC-ccccccccccc
Confidence 367899999988776655 55555 5554444 66778888899999999 99999987754
No 168
>COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]
Probab=21.05 E-value=51 Score=35.12 Aligned_cols=33 Identities=27% Similarity=0.650 Sum_probs=23.2
Q ss_pred hhhhHHHHHHHh----hhhhhhcccccccchhhhhhh
Q 011450 450 FLMASVVTVFMI----TSIFNTVGKTDKWTSVRQRNQ 482 (485)
Q Consensus 450 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 482 (485)
|+.|+++++|.+ ++++++=.+.+.|.|.|.|-+
T Consensus 47 ~~ii~lvv~~~l~~~l~~v~~~~~~~~~w~~~rKrrr 83 (400)
T COG3071 47 FLIIALVVLYLLEWLLRRVLRTPAHTRGWFSRRKRRR 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 455666666665 666677778889999877644
No 169
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=21.00 E-value=1.2e+02 Score=23.60 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=23.5
Q ss_pred EEEEEcCCCCChhHHHHHHHHHhhcCCC
Q 011450 351 IVNVLIPKDISDPERALVEEIAFLKSPG 378 (485)
Q Consensus 351 ~~~V~~P~~ls~~q~~ll~~l~~~~~~~ 378 (485)
.-..+||..|++.+|..+.+++....-.
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~a~~~gL~ 43 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRLCRKLGLK 43 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHHHHHcCCC
Confidence 4567899999999999999999876543
No 170
>KOG2724 consensus Nuclear pore complex component NPAP60L/NUP50 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.68 E-value=1e+02 Score=33.23 Aligned_cols=84 Identities=15% Similarity=0.159 Sum_probs=57.5
Q ss_pred cEEEEEEeeccccccccccceEEEEEecchhhccCceEEEEccCCeEEEEeCCCCCCCCEEE--EcCCCCCCCCCCCCCc
Q 011450 269 DLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVK--LQQMGVPDINNPSVRG 346 (485)
Q Consensus 269 DL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~V~tldG~~~l~Ip~g~q~G~~ir--l~g~G~P~~~~~~~rG 346 (485)
-+|++.++.+++.|.-.+--+++...=.+.+-=.|.-.-=++.++...|-|+..++-|.++. |-.+|||.-.. +..+
T Consensus 370 pkve~~ev~edda~ysKkckvfykKdKEf~dkGvgtl~lkp~~~~k~qlLvradtnlGnilLN~Ll~kgMkctr~-gknn 448 (487)
T KOG2724|consen 370 PKVETVEVQEDDAVYSKKCKVFYKKDKEFTDKGVGTLHLKPNDRGKFQLLVRADTNLGNILLNSLLNKGMKCTRV-GKNN 448 (487)
T ss_pred CeeEeecccCccchhccccceEEEecccccccccceeecccccccceeeeehhccchhHHHHHHhhcCCCcceec-cCCc
Confidence 46788888888877776666666666556554444333334445778889999999888875 78899997543 4566
Q ss_pred cEEEEEE
Q 011450 347 DHLFIVN 353 (485)
Q Consensus 347 DL~V~~~ 353 (485)
+|||.+-
T Consensus 449 vlIvcvp 455 (487)
T KOG2724|consen 449 VLIVCVP 455 (487)
T ss_pred eEEEEeC
Confidence 6766543
Done!