Query 011452
Match_columns 485
No_of_seqs 243 out of 596
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 08:25:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011452.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011452hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 6E-53 2.1E-57 452.3 45.0 362 94-485 58-565 (611)
2 1nr0_A Actin interacting prote 100.0 3.9E-53 1.3E-57 453.8 41.8 318 94-485 146-609 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 5.1E-52 1.7E-56 432.1 44.6 313 93-484 260-577 (577)
4 3ow8_A WD repeat-containing pr 100.0 5.9E-51 2E-55 403.6 40.7 289 125-485 22-319 (321)
5 1vyh_C Platelet-activating fac 100.0 2.2E-51 7.5E-56 419.1 38.4 295 117-485 91-409 (410)
6 1got_B GT-beta; complex (GTP-b 100.0 6.1E-50 2.1E-54 396.5 42.6 288 125-484 45-340 (340)
7 2ymu_A WD-40 repeat protein; u 100.0 9.5E-50 3.2E-54 415.0 44.6 313 93-484 219-536 (577)
8 4g56_B MGC81050 protein; prote 100.0 2.2E-50 7.4E-55 405.2 34.8 312 106-485 17-341 (357)
9 2pbi_B Guanine nucleotide-bind 100.0 2.2E-48 7.5E-53 389.5 43.8 289 126-484 55-354 (354)
10 4gqb_B Methylosome protein 50; 100.0 8.6E-49 2.9E-53 394.6 39.0 300 116-485 15-329 (344)
11 3iz6_a 40S ribosomal protein R 100.0 7.4E-50 2.5E-54 402.5 31.0 304 115-485 46-373 (380)
12 2ynn_A Coatomer subunit beta'; 100.0 2.4E-48 8.2E-53 379.4 38.3 285 127-484 5-299 (304)
13 3frx_A Guanine nucleotide-bind 100.0 4.8E-47 1.7E-51 373.3 42.6 296 126-485 8-315 (319)
14 1r5m_A SIR4-interacting protei 100.0 1.5E-47 5.1E-52 377.3 38.3 318 94-485 44-423 (425)
15 1vyh_C Platelet-activating fac 100.0 7.7E-48 2.6E-52 392.9 36.9 279 93-405 106-409 (410)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-47 9.8E-52 378.8 38.1 291 125-484 5-332 (345)
17 3ow8_A WD repeat-containing pr 100.0 7.5E-47 2.6E-51 374.1 40.4 278 93-405 30-319 (321)
18 1erj_A Transcriptional repress 100.0 9E-47 3.1E-51 381.6 40.8 278 135-484 63-386 (393)
19 2hes_X YDR267CP; beta-propelle 100.0 1.7E-46 5.7E-51 371.1 38.5 290 124-485 3-326 (330)
20 1got_B GT-beta; complex (GTP-b 100.0 4.3E-46 1.5E-50 368.9 41.4 278 94-404 54-340 (340)
21 2ynn_A Coatomer subunit beta'; 100.0 2.3E-46 7.9E-51 365.3 38.8 290 70-407 3-302 (304)
22 4ery_A WD repeat-containing pr 100.0 1.4E-45 4.7E-50 356.8 41.9 291 125-485 13-310 (312)
23 2pm9_A Protein WEB1, protein t 100.0 6.2E-48 2.1E-52 382.7 23.7 342 98-485 15-412 (416)
24 1gxr_A ESG1, transducin-like e 100.0 3.7E-45 1.3E-49 350.1 41.9 320 94-485 8-335 (337)
25 1pgu_A Actin interacting prote 100.0 4.2E-45 1.4E-49 379.6 42.5 317 94-485 159-612 (615)
26 2pbi_B Guanine nucleotide-bind 100.0 2.8E-45 9.6E-50 367.0 39.5 279 94-404 63-354 (354)
27 4aow_A Guanine nucleotide-bind 100.0 1.3E-44 4.5E-49 348.4 42.6 305 120-485 23-335 (340)
28 2xzm_R RACK1; ribosome, transl 100.0 4E-45 1.4E-49 361.8 39.0 299 125-485 11-338 (343)
29 4gqb_B Methylosome protein 50; 100.0 2.1E-45 7.2E-50 369.9 36.6 283 94-410 29-334 (344)
30 2oaj_A Protein SNI1; WD40 repe 100.0 8.6E-46 2.9E-50 418.4 37.3 322 93-485 56-603 (902)
31 3frx_A Guanine nucleotide-bind 100.0 5.9E-45 2E-49 358.4 38.0 296 70-409 7-319 (319)
32 3iz6_a 40S ribosomal protein R 100.0 9.9E-46 3.4E-50 372.4 31.7 285 94-409 65-377 (380)
33 2oaj_A Protein SNI1; WD40 repe 100.0 6.7E-46 2.3E-50 419.3 32.2 320 94-485 97-659 (902)
34 3sfz_A APAF-1, apoptotic pepti 100.0 3.1E-44 1.1E-48 408.7 45.8 368 94-485 614-1156(1249)
35 4h5i_A Guanine nucleotide-exch 100.0 2.9E-45 9.8E-50 369.6 32.7 286 137-485 15-341 (365)
36 4g56_B MGC81050 protein; prote 100.0 6.9E-45 2.4E-49 365.1 32.7 287 92-409 39-345 (357)
37 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-46 8.9E-51 400.4 23.6 312 106-485 174-515 (524)
38 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.2E-44 1.1E-48 356.9 35.9 286 97-414 18-342 (345)
39 2hes_X YDR267CP; beta-propelle 100.0 6.1E-44 2.1E-48 352.8 37.2 283 94-407 13-328 (330)
40 3gre_A Serine/threonine-protei 100.0 5E-45 1.7E-49 368.2 29.5 342 105-484 39-437 (437)
41 1erj_A Transcriptional repress 100.0 1.3E-43 4.4E-48 358.5 38.3 279 93-406 62-388 (393)
42 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1E-42 3.6E-47 354.2 43.7 303 98-485 122-440 (445)
43 2xzm_R RACK1; ribosome, transl 100.0 1.2E-43 4.1E-48 351.2 35.0 267 105-409 39-342 (343)
44 3ei3_B DNA damage-binding prot 100.0 8.5E-44 2.9E-48 353.1 33.5 294 122-485 60-380 (383)
45 4ery_A WD repeat-containing pr 100.0 1.1E-42 3.6E-47 336.6 40.3 292 69-406 12-311 (312)
46 4aow_A Guanine nucleotide-bind 100.0 3.4E-43 1.2E-47 338.5 36.5 293 69-409 27-339 (340)
47 3zwl_B Eukaryotic translation 100.0 1.4E-42 4.6E-47 335.5 40.3 296 129-485 26-344 (369)
48 3v7d_B Cell division control p 100.0 2.1E-42 7.2E-47 351.7 41.9 310 94-483 120-459 (464)
49 3vl1_A 26S proteasome regulato 100.0 2E-43 6.9E-48 352.3 32.7 315 98-485 59-417 (420)
50 3dm0_A Maltose-binding peripla 100.0 1.9E-42 6.3E-47 374.7 41.8 302 130-485 377-691 (694)
51 3sfz_A APAF-1, apoptotic pepti 100.0 2.3E-44 8E-49 409.8 28.0 321 93-485 838-1247(1249)
52 3mkq_A Coatomer beta'-subunit; 100.0 3.6E-42 1.2E-46 372.6 41.0 291 70-408 3-303 (814)
53 3odt_A Protein DOA1; ubiquitin 100.0 2E-41 6.7E-46 321.7 40.4 278 126-485 9-294 (313)
54 1pgu_A Actin interacting prote 100.0 6.8E-42 2.3E-46 355.5 40.2 346 94-484 17-399 (615)
55 3i2n_A WD repeat-containing pr 100.0 1.2E-42 4E-47 336.2 31.9 293 126-485 8-351 (357)
56 3k26_A Polycomb protein EED; W 100.0 1.4E-42 4.8E-47 336.0 32.3 289 129-485 11-364 (366)
57 1r5m_A SIR4-interacting protei 100.0 9.1E-42 3.1E-46 336.0 37.5 300 114-485 24-359 (425)
58 1sq9_A Antiviral protein SKI8; 100.0 5.9E-42 2E-46 338.4 34.1 299 129-485 10-393 (397)
59 4ggc_A P55CDC, cell division c 100.0 1.9E-41 6.3E-46 323.4 35.4 275 139-485 28-313 (318)
60 4e54_B DNA damage-binding prot 100.0 4.5E-43 1.5E-47 358.5 25.5 301 129-485 113-428 (435)
61 2pm9_A Protein WEB1, protein t 100.0 5E-43 1.7E-47 347.4 24.1 283 138-485 14-335 (416)
62 4a11_B DNA excision repair pro 100.0 1.5E-41 5.2E-46 333.5 33.1 310 112-485 20-363 (408)
63 2pm7_B Protein transport prote 100.0 1.6E-41 5.6E-46 330.0 31.1 237 191-484 8-282 (297)
64 1sq9_A Antiviral protein SKI8; 100.0 4.3E-41 1.5E-45 332.3 34.1 285 94-409 15-397 (397)
65 1k8k_C P40, ARP2/3 complex 41 100.0 5.8E-41 2E-45 327.0 34.2 305 135-485 7-359 (372)
66 4h5i_A Guanine nucleotide-exch 100.0 6.5E-41 2.2E-45 337.8 34.5 287 97-407 16-343 (365)
67 4gga_A P55CDC, cell division c 100.0 1.6E-40 5.5E-45 337.5 36.8 274 138-485 107-393 (420)
68 3zwl_B Eukaryotic translation 100.0 2.6E-40 8.8E-45 319.6 36.4 286 94-416 31-355 (369)
69 3vl1_A 26S proteasome regulato 100.0 2E-41 6.7E-46 338.0 29.1 273 139-484 59-362 (420)
70 3ei3_B DNA damage-binding prot 100.0 8.7E-41 3E-45 331.5 32.4 278 94-407 72-382 (383)
71 3dm0_A Maltose-binding peripla 100.0 6.1E-40 2.1E-44 355.0 40.0 281 94-406 381-692 (694)
72 3odt_A Protein DOA1; ubiquitin 100.0 1E-39 3.5E-44 310.0 36.6 293 68-415 6-304 (313)
73 2w18_A PALB2, fancn, partner a 100.0 1.6E-40 5.6E-45 341.6 32.6 271 105-485 53-355 (356)
74 3k26_A Polycomb protein EED; W 100.0 1.4E-40 4.7E-45 322.0 30.1 279 94-407 17-366 (366)
75 3bg1_A Protein SEC13 homolog; 100.0 1.8E-41 6.1E-46 333.1 24.1 237 190-484 11-290 (316)
76 1k8k_C P40, ARP2/3 complex 41 100.0 3.2E-40 1.1E-44 321.7 31.5 284 94-410 7-364 (372)
77 4a11_B DNA excision repair pro 100.0 6.5E-40 2.2E-44 321.9 32.1 291 94-418 42-376 (408)
78 3dwl_C Actin-related protein 2 100.0 1.6E-41 5.4E-46 334.6 19.6 236 135-406 10-280 (377)
79 4gga_A P55CDC, cell division c 100.0 4.2E-39 1.4E-43 327.1 38.0 294 88-418 98-406 (420)
80 3i2n_A WD repeat-containing pr 100.0 7E-40 2.4E-44 316.7 29.8 284 94-411 17-357 (357)
81 1gxr_A ESG1, transducin-like e 100.0 2E-38 6.9E-43 303.3 39.0 276 94-405 50-335 (337)
82 3mmy_A MRNA export factor; mRN 100.0 7E-39 2.4E-43 309.4 35.2 299 116-484 20-343 (368)
83 3v7d_B Cell division control p 100.0 3.4E-38 1.2E-42 320.7 41.0 278 127-485 113-419 (464)
84 3vu4_A KMHSV2; beta-propeller 100.0 7.2E-39 2.5E-43 320.6 34.8 303 119-484 3-333 (355)
85 2j04_B YDR362CP, TAU91; beta p 100.0 5.8E-41 2E-45 359.1 20.6 266 124-485 123-426 (524)
86 4ggc_A P55CDC, cell division c 100.0 5.2E-38 1.8E-42 299.6 37.8 271 101-408 31-316 (318)
87 1yfq_A Cell cycle arrest prote 100.0 1.6E-39 5.4E-44 314.0 27.5 281 131-483 6-320 (342)
88 3dw8_B Serine/threonine-protei 100.0 2E-39 6.9E-44 325.3 29.2 316 135-484 27-443 (447)
89 4e54_B DNA damage-binding prot 100.0 2.2E-40 7.6E-45 338.6 22.6 282 94-411 118-434 (435)
90 3gre_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 327.1 29.3 282 94-404 62-437 (437)
91 2pm7_B Protein transport prote 100.0 5.6E-39 1.9E-43 312.2 30.8 247 129-406 3-284 (297)
92 2j04_A TAU60, YPL007P, hypothe 100.0 5.1E-40 1.7E-44 356.4 25.5 309 96-476 16-350 (588)
93 4aez_A CDC20, WD repeat-contai 100.0 3E-38 1E-42 318.4 36.2 284 98-418 96-391 (401)
94 3mkq_A Coatomer beta'-subunit; 100.0 1.7E-38 5.7E-43 343.8 36.0 285 127-484 5-299 (814)
95 3bg1_A Protein SEC13 homolog; 100.0 1.8E-39 6.3E-44 318.8 24.3 259 130-418 7-307 (316)
96 4aez_A CDC20, WD repeat-contai 100.0 7.3E-38 2.5E-42 315.5 36.2 273 139-485 96-378 (401)
97 1p22_A F-BOX/WD-repeat protein 100.0 2.6E-38 9E-43 322.1 32.5 265 135-485 132-412 (435)
98 3f3f_A Nucleoporin SEH1; struc 100.0 4.9E-38 1.7E-42 298.4 31.9 238 190-485 9-335 (351)
99 3dwl_C Actin-related protein 2 100.0 1.2E-39 4E-44 321.3 21.1 244 75-349 6-280 (377)
100 1p22_A F-BOX/WD-repeat protein 100.0 4.4E-38 1.5E-42 320.5 33.0 276 94-416 132-423 (435)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.9E-37 1.7E-41 312.4 39.7 282 120-485 103-389 (445)
102 3f3f_A Nucleoporin SEH1; struc 100.0 4.4E-37 1.5E-41 291.7 32.0 256 133-417 8-350 (351)
103 1l0q_A Surface layer protein; 100.0 1.5E-35 5.1E-40 293.4 43.7 275 106-419 3-287 (391)
104 3jrp_A Fusion protein of prote 100.0 5.7E-37 2E-41 298.0 32.2 237 191-485 10-285 (379)
105 3dw8_B Serine/threonine-protei 100.0 6.9E-37 2.4E-41 306.9 31.6 284 92-405 25-444 (447)
106 3mmy_A MRNA export factor; mRN 100.0 1.4E-36 4.9E-41 293.2 30.9 283 94-411 38-353 (368)
107 3bws_A Protein LP49; two-domai 100.0 1.4E-35 4.9E-40 297.5 36.8 313 110-485 94-430 (433)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.6E-36 2.6E-40 305.8 34.3 279 138-484 6-388 (450)
109 4gq1_A NUP37; propeller, trans 100.0 3.5E-37 1.2E-41 312.5 24.1 223 200-479 96-382 (393)
110 2j04_A TAU60, YPL007P, hypothe 100.0 2.9E-37 1E-41 334.8 23.9 255 136-484 15-294 (588)
111 1yfq_A Cell cycle arrest prote 100.0 5.6E-36 1.9E-40 289.1 28.9 264 94-385 10-312 (342)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-36 6.5E-41 304.1 25.1 279 140-485 38-340 (402)
113 3jrp_A Fusion protein of prote 100.0 1.6E-35 5.6E-40 287.7 30.8 255 125-411 1-291 (379)
114 2aq5_A Coronin-1A; WD40 repeat 100.0 6.6E-36 2.3E-40 300.2 27.4 271 107-411 49-346 (402)
115 3lrv_A PRE-mRNA-splicing facto 100.0 9.5E-36 3.3E-40 294.0 24.9 265 105-483 48-329 (343)
116 1nir_A Nitrite reductase; hemo 100.0 4.1E-34 1.4E-38 306.3 37.9 310 105-484 149-511 (543)
117 3lrv_A PRE-mRNA-splicing facto 100.0 8.2E-36 2.8E-40 294.4 20.2 224 203-484 46-289 (343)
118 1l0q_A Surface layer protein; 100.0 3E-33 1E-37 276.8 38.7 254 168-485 12-273 (391)
119 3vu4_A KMHSV2; beta-propeller 100.0 2.5E-34 8.6E-39 287.7 30.1 227 191-485 18-269 (355)
120 2xyi_A Probable histone-bindin 100.0 7.5E-34 2.6E-38 290.4 31.6 239 191-485 127-408 (430)
121 4gq1_A NUP37; propeller, trans 100.0 3.1E-34 1.1E-38 290.8 26.7 239 137-405 90-387 (393)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-33 3.9E-38 289.7 29.8 255 196-485 8-337 (450)
123 3jro_A Fusion protein of prote 100.0 1.1E-33 3.7E-38 311.8 24.9 237 191-485 8-283 (753)
124 3bws_A Protein LP49; two-domai 100.0 6.7E-32 2.3E-36 270.8 35.6 276 97-406 124-431 (433)
125 2w18_A PALB2, fancn, partner a 100.0 1.2E-32 4.1E-37 283.2 28.8 238 72-348 78-355 (356)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.3E-31 7.8E-36 273.4 34.9 281 106-418 76-397 (415)
127 3jro_A Fusion protein of prote 100.0 4E-33 1.4E-37 307.3 22.7 248 130-409 4-287 (753)
128 2ecf_A Dipeptidyl peptidase IV 100.0 6E-32 2.1E-36 291.7 30.6 315 95-484 36-456 (741)
129 2xyi_A Probable histone-bindin 100.0 1.6E-31 5.5E-36 273.1 27.7 252 124-408 116-411 (430)
130 1nir_A Nitrite reductase; hemo 100.0 4.6E-30 1.6E-34 274.9 35.2 295 98-418 181-525 (543)
131 1xfd_A DIP, dipeptidyl aminope 100.0 1.3E-30 4.6E-35 279.9 24.2 319 81-474 17-427 (723)
132 3vgz_A Uncharacterized protein 100.0 5.4E-28 1.8E-32 234.3 38.6 274 137-477 41-334 (353)
133 1k32_A Tricorn protease; prote 100.0 3.7E-29 1.3E-33 284.2 34.1 233 197-484 249-499 (1045)
134 2z3z_A Dipeptidyl aminopeptida 100.0 1.9E-29 6.4E-34 271.2 29.8 307 101-485 31-433 (706)
135 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.7E-29 5.7E-34 259.5 26.6 287 138-485 64-385 (415)
136 1pby_B Quinohemoprotein amine 100.0 1.7E-28 5.9E-33 235.0 31.5 277 105-418 1-321 (337)
137 1k32_A Tricorn protease; prote 100.0 2E-28 6.9E-33 278.1 35.7 316 95-485 14-459 (1045)
138 3u4y_A Uncharacterized protein 100.0 6.7E-27 2.3E-31 226.1 37.0 281 105-418 10-314 (331)
139 2ecf_A Dipeptidyl peptidase IV 100.0 2.3E-28 8E-33 263.7 28.6 281 136-484 36-410 (741)
140 3u4y_A Uncharacterized protein 100.0 9.1E-27 3.1E-31 225.2 33.1 278 142-485 3-302 (331)
141 3o4h_A Acylamino-acid-releasin 100.0 9.2E-29 3.1E-33 261.3 20.4 273 127-484 12-312 (582)
142 1xfd_A DIP, dipeptidyl aminope 100.0 7E-29 2.4E-33 266.5 19.8 278 138-484 18-390 (723)
143 1ri6_A Putative isomerase YBHE 100.0 1.9E-26 6.5E-31 221.4 33.7 277 106-416 5-321 (343)
144 1z68_A Fibroblast activation p 100.0 3.5E-28 1.2E-32 262.3 19.5 318 105-484 27-440 (719)
145 2ojh_A Uncharacterized protein 100.0 6.7E-27 2.3E-31 217.7 24.5 257 168-478 22-293 (297)
146 3o4h_A Acylamino-acid-releasin 100.0 4.5E-27 1.5E-31 248.4 25.4 279 95-414 21-320 (582)
147 1pby_B Quinohemoprotein amine 100.0 3E-26 1E-30 219.4 28.4 252 168-485 11-308 (337)
148 1ri6_A Putative isomerase YBHE 100.0 1.7E-25 6E-30 214.7 32.5 260 168-484 15-305 (343)
149 2z3z_A Dipeptidyl aminopeptida 100.0 1.1E-25 3.9E-30 241.8 33.3 286 96-414 82-441 (706)
150 2ojh_A Uncharacterized protein 99.9 3.4E-26 1.2E-30 213.0 25.2 249 110-385 17-291 (297)
151 3hfq_A Uncharacterized protein 99.9 6.8E-25 2.3E-29 214.9 35.5 270 113-412 14-324 (347)
152 3vgz_A Uncharacterized protein 99.9 5.4E-24 1.8E-28 206.1 37.3 264 96-385 41-333 (353)
153 3hfq_A Uncharacterized protein 99.9 1.5E-24 5E-29 212.5 32.4 262 168-484 16-314 (347)
154 3pe7_A Oligogalacturonate lyas 99.9 1.4E-24 4.8E-29 214.5 27.8 320 118-484 13-379 (388)
155 1jmx_B Amine dehydrogenase; ox 99.9 1.9E-24 6.4E-29 208.5 28.1 267 105-417 11-335 (349)
156 1z68_A Fibroblast activation p 99.9 3.4E-26 1.2E-30 246.8 16.2 273 140-484 19-388 (719)
157 1jmx_B Amine dehydrogenase; ox 99.9 2E-24 6.9E-29 208.3 26.9 229 198-485 5-323 (349)
158 3scy_A Hypothetical bacterial 99.9 1.8E-22 6.3E-27 199.1 34.8 275 107-413 15-345 (361)
159 3scy_A Hypothetical bacterial 99.9 1E-22 3.5E-27 200.9 32.9 258 168-484 27-334 (361)
160 3c5m_A Oligogalacturonate lyas 99.9 6.2E-24 2.1E-28 208.9 21.0 317 119-484 14-379 (396)
161 4a5s_A Dipeptidyl peptidase 4 99.9 2.6E-23 8.8E-28 227.9 27.2 295 78-412 14-358 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 3.6E-22 1.2E-26 199.6 30.6 270 107-408 4-342 (365)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 8.5E-23 2.9E-27 204.1 25.6 245 194-484 41-338 (365)
164 4a5s_A Dipeptidyl peptidase 4 99.9 5.2E-24 1.8E-28 233.3 16.3 213 168-409 3-296 (740)
165 1q7f_A NHL, brain tumor CG1071 99.9 3.1E-21 1.1E-25 184.3 32.7 235 191-485 28-278 (286)
166 3azo_A Aminopeptidase; POP fam 99.9 4.2E-22 1.4E-26 212.5 27.0 293 94-418 22-380 (662)
167 3fvz_A Peptidyl-glycine alpha- 99.9 8.1E-21 2.8E-25 187.8 32.7 245 192-484 23-319 (329)
168 3pe7_A Oligogalacturonate lyas 99.9 4.7E-22 1.6E-26 196.3 23.4 273 105-405 47-380 (388)
169 2oiz_A Aromatic amine dehydrog 99.9 9E-21 3.1E-25 191.6 32.9 279 113-418 29-347 (361)
170 2oit_A Nucleoporin 214KDA; NH2 99.9 7.6E-22 2.6E-26 205.0 24.2 208 195-408 39-279 (434)
171 2oit_A Nucleoporin 214KDA; NH2 99.9 4.1E-22 1.4E-26 207.0 15.7 213 215-485 23-276 (434)
172 2gop_A Trilobed protease; beta 99.9 1.1E-19 3.7E-24 177.1 31.8 271 98-418 17-340 (347)
173 2gop_A Trilobed protease; beta 99.9 2.3E-19 7.7E-24 174.8 31.7 266 137-484 15-328 (347)
174 1q7f_A NHL, brain tumor CG1071 99.9 5.5E-19 1.9E-23 168.6 31.3 237 136-407 29-280 (286)
175 3fvz_A Peptidyl-glycine alpha- 99.9 3E-19 1E-23 176.5 29.8 239 95-351 23-323 (329)
176 2oiz_A Aromatic amine dehydrog 99.9 1.5E-19 5.2E-24 182.6 27.3 266 167-485 30-332 (361)
177 3c5m_A Oligogalacturonate lyas 99.9 2.5E-20 8.5E-25 183.2 20.8 274 105-410 47-387 (396)
178 3azo_A Aminopeptidase; POP fam 99.8 2E-19 7E-24 191.7 28.1 285 131-484 19-364 (662)
179 2bkl_A Prolyl endopeptidase; m 99.8 4.7E-19 1.6E-23 192.8 28.5 283 105-418 79-407 (695)
180 2xdw_A Prolyl endopeptidase; a 99.8 1.1E-17 3.7E-22 182.2 34.1 257 135-417 123-425 (710)
181 3e5z_A Putative gluconolactona 99.8 4.2E-18 1.4E-22 164.0 26.8 228 191-482 26-282 (296)
182 2dg1_A DRP35, lactonase; beta 99.8 2.2E-18 7.5E-23 167.6 24.2 271 137-477 6-300 (333)
183 2xdw_A Prolyl endopeptidase; a 99.8 3.4E-18 1.2E-22 186.2 28.0 236 195-485 127-412 (710)
184 1yr2_A Prolyl oligopeptidase; 99.8 1.9E-17 6.6E-22 181.6 29.9 283 105-416 118-449 (741)
185 2bkl_A Prolyl endopeptidase; m 99.8 1.8E-18 6.2E-23 188.1 21.2 275 145-485 76-395 (695)
186 2dg1_A DRP35, lactonase; beta 99.8 6.2E-17 2.1E-21 157.4 29.6 266 98-385 8-299 (333)
187 3no2_A Uncharacterized protein 99.8 4.5E-17 1.5E-21 159.5 27.6 215 204-474 4-230 (276)
188 3dsm_A Uncharacterized protein 99.8 1E-16 3.5E-21 159.1 29.7 254 168-484 17-299 (328)
189 2z2n_A Virginiamycin B lyase; 99.8 8.6E-15 2.9E-19 138.1 39.4 269 135-482 13-291 (299)
190 3dsm_A Uncharacterized protein 99.8 3.3E-16 1.1E-20 155.4 29.0 268 113-416 15-310 (328)
191 1qks_A Cytochrome CD1 nitrite 99.8 4.8E-15 1.7E-19 160.4 39.6 320 105-484 167-535 (567)
192 1yr2_A Prolyl oligopeptidase; 99.8 8.2E-17 2.8E-21 176.6 25.5 274 145-485 115-439 (741)
193 1rwi_B Serine/threonine-protei 99.8 2.5E-16 8.5E-21 147.9 24.7 231 194-484 25-261 (270)
194 3e5z_A Putative gluconolactona 99.8 5.6E-16 1.9E-20 149.1 27.5 234 125-385 17-276 (296)
195 2z2n_A Virginiamycin B lyase; 99.7 4E-14 1.4E-18 133.5 37.7 274 95-409 14-297 (299)
196 3hrp_A Uncharacterized protein 99.7 2.1E-15 7.3E-20 155.7 29.5 255 191-484 129-407 (409)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 3.7E-15 1.3E-19 142.6 28.5 232 191-484 16-296 (314)
198 1rwi_B Serine/threonine-protei 99.7 5.7E-15 1.9E-19 138.6 25.6 237 138-409 25-266 (270)
199 3no2_A Uncharacterized protein 99.7 5.5E-15 1.9E-19 144.7 26.1 233 105-362 5-265 (276)
200 2qe8_A Uncharacterized protein 99.7 2.2E-15 7.5E-20 150.2 20.8 265 137-480 17-314 (343)
201 3g4e_A Regucalcin; six bladed 99.7 7.1E-14 2.4E-18 136.0 29.9 224 193-476 13-261 (297)
202 2qc5_A Streptogramin B lactona 99.7 1.9E-12 6.6E-17 122.0 37.0 264 135-475 18-290 (300)
203 1qks_A Cytochrome CD1 nitrite 99.6 2.2E-12 7.4E-17 139.7 39.5 302 97-417 198-548 (567)
204 2mad_H Methylamine dehydrogena 99.6 1.5E-12 5.2E-17 133.1 35.6 284 143-485 27-348 (373)
205 3iuj_A Prolyl endopeptidase; h 99.6 2.6E-13 8.9E-18 148.3 27.7 251 135-417 127-414 (693)
206 2qc5_A Streptogramin B lactona 99.6 1.7E-11 5.9E-16 115.5 36.3 261 95-383 19-289 (300)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.2E-12 4E-17 125.2 28.2 233 97-349 19-298 (314)
208 2mad_H Methylamine dehydrogena 99.6 7.5E-12 2.5E-16 127.9 35.6 266 116-414 48-357 (373)
209 3sjl_D Methylamine dehydrogena 99.6 2.9E-12 1E-16 133.1 30.9 288 105-417 44-373 (386)
210 2ghs_A AGR_C_1268P; regucalcin 99.6 5.8E-12 2E-16 124.7 31.3 221 194-475 50-290 (326)
211 2qe8_A Uncharacterized protein 99.5 1.1E-13 3.8E-18 137.8 16.3 221 193-484 17-275 (343)
212 3sjl_D Methylamine dehydrogena 99.5 5.6E-13 1.9E-17 138.5 22.0 291 137-484 33-360 (386)
213 3hrp_A Uncharacterized protein 99.5 6.7E-12 2.3E-16 129.5 29.7 233 138-405 132-408 (409)
214 3iuj_A Prolyl endopeptidase; h 99.5 4.5E-13 1.5E-17 146.4 21.4 233 194-484 130-402 (693)
215 1yiq_A Quinohemoprotein alcoho 99.5 2.7E-12 9.2E-17 141.4 27.6 280 104-418 69-516 (689)
216 3dr2_A Exported gluconolactona 99.5 5.2E-12 1.8E-16 123.0 26.5 226 192-482 44-302 (305)
217 3g4e_A Regucalcin; six bladed 99.5 2E-11 6.7E-16 118.7 30.3 226 135-385 11-261 (297)
218 1kb0_A Quinohemoprotein alcoho 99.5 3E-11 1E-15 132.9 30.5 278 104-418 76-518 (677)
219 2ghs_A AGR_C_1268P; regucalcin 99.4 1.5E-10 5.1E-15 114.6 31.4 223 138-385 50-291 (326)
220 2hz6_A Endoplasmic reticulum t 99.4 2.5E-14 8.5E-19 145.2 4.3 187 204-416 8-201 (369)
221 3hxj_A Pyrrolo-quinoline quino 99.4 1.9E-11 6.5E-16 117.6 22.5 288 105-483 30-320 (330)
222 3q7m_A Lipoprotein YFGL, BAMB; 99.4 6.4E-10 2.2E-14 110.5 34.2 269 103-417 51-347 (376)
223 3c75_H MADH, methylamine dehyd 99.4 5.6E-11 1.9E-15 124.9 27.6 275 115-414 99-409 (426)
224 3dr2_A Exported gluconolactona 99.4 6E-11 2.1E-15 115.5 25.8 233 125-385 34-296 (305)
225 3c75_H MADH, methylamine dehyd 99.4 3E-11 1E-15 126.9 25.1 283 145-485 81-400 (426)
226 1mda_H Methylamine dehydrogena 99.4 1.7E-11 5.8E-16 126.3 21.2 282 106-418 33-357 (368)
227 1xip_A Nucleoporin NUP159; bet 99.4 9.8E-12 3.4E-16 129.2 18.6 170 194-386 39-234 (388)
228 1xip_A Nucleoporin NUP159; bet 99.4 1.8E-11 6E-16 127.3 18.9 168 234-473 38-230 (388)
229 1yiq_A Quinohemoprotein alcoho 99.3 2.8E-10 9.5E-15 125.4 27.5 244 198-484 117-502 (689)
230 1kb0_A Quinohemoprotein alcoho 99.3 4.5E-10 1.5E-14 123.5 26.7 245 197-485 123-505 (677)
231 2hz6_A Endoplasmic reticulum t 99.2 2.2E-12 7.6E-17 130.8 1.2 146 244-416 9-158 (369)
232 1mda_H Methylamine dehydrogena 99.2 2.2E-10 7.5E-15 118.0 15.0 256 169-485 47-344 (368)
233 1npe_A Nidogen, entactin; glyc 99.2 2.2E-07 7.6E-12 88.3 34.6 205 192-417 35-248 (267)
234 1kv9_A Type II quinohemoprotei 99.1 1.3E-08 4.3E-13 111.7 27.0 278 104-418 65-499 (668)
235 3q7m_A Lipoprotein YFGL, BAMB; 99.1 6.5E-08 2.2E-12 96.0 27.0 257 101-404 99-375 (376)
236 2iwa_A Glutamine cyclotransfer 99.1 3.6E-08 1.2E-12 97.6 24.9 175 225-416 9-190 (266)
237 4a2l_A BT_4663, two-component 99.0 1.1E-06 3.9E-11 96.8 38.2 323 94-484 86-433 (795)
238 1npe_A Nidogen, entactin; glyc 99.0 5.9E-07 2E-11 85.3 30.5 190 206-414 2-205 (267)
239 2ece_A 462AA long hypothetical 99.0 9.5E-08 3.2E-12 101.3 26.0 200 204-415 94-363 (462)
240 2ad6_A Methanol dehydrogenase 99.0 3.3E-07 1.1E-11 98.9 30.6 279 104-418 61-505 (571)
241 4a2l_A BT_4663, two-component 99.0 6.8E-06 2.3E-10 90.6 41.3 312 98-480 175-520 (795)
242 2p4o_A Hypothetical protein; p 99.0 6.1E-07 2.1E-11 87.6 29.4 223 193-477 32-278 (306)
243 3hxj_A Pyrrolo-quinoline quino 99.0 2.8E-08 9.5E-13 95.4 19.5 259 97-406 61-323 (330)
244 2iwa_A Glutamine cyclotransfer 99.0 3.2E-07 1.1E-11 90.8 27.2 194 195-406 23-236 (266)
245 1flg_A Protein (quinoprotein e 99.0 1.2E-06 4.1E-11 94.9 33.9 281 104-418 67-527 (582)
246 1fwx_A Nitrous oxide reductase 99.0 3.6E-08 1.2E-12 107.5 21.1 262 108-385 18-407 (595)
247 1kv9_A Type II quinohemoprotei 99.0 1.2E-07 4E-12 104.0 25.5 244 198-484 113-485 (668)
248 1w6s_A Methanol dehydrogenase 98.9 5.9E-07 2E-11 98.0 29.7 281 104-418 61-514 (599)
249 3nol_A Glutamine cyclotransfer 98.9 2.8E-07 9.6E-12 91.2 23.0 205 225-475 31-243 (262)
250 1fwx_A Nitrous oxide reductase 98.9 7.4E-08 2.5E-12 105.0 20.2 195 204-418 100-382 (595)
251 3v9f_A Two-component system se 98.9 2.3E-05 8E-10 86.2 39.8 314 95-481 257-606 (781)
252 3nol_A Glutamine cyclotransfer 98.9 2.8E-07 9.7E-12 91.2 21.6 179 197-385 47-244 (262)
253 3mbr_X Glutamine cyclotransfer 98.8 2E-06 6.9E-11 84.1 26.1 174 224-417 8-189 (243)
254 2fp8_A Strictosidine synthase; 98.8 2.5E-06 8.6E-11 83.3 26.3 243 192-484 18-310 (322)
255 2p4o_A Hypothetical protein; p 98.7 9.6E-06 3.3E-10 79.1 28.4 231 125-385 22-277 (306)
256 3nok_A Glutaminyl cyclase; bet 98.7 1.3E-06 4.4E-11 86.7 21.5 179 197-385 59-254 (268)
257 2fp8_A Strictosidine synthase; 98.7 7.2E-06 2.5E-10 80.1 26.4 197 193-406 80-312 (322)
258 3mbr_X Glutamine cyclotransfer 98.7 3.5E-06 1.2E-10 82.5 23.9 179 197-385 25-223 (243)
259 3nok_A Glutaminyl cyclase; bet 98.7 1.7E-06 6E-11 85.8 21.5 168 226-416 44-219 (268)
260 2ad6_A Methanol dehydrogenase 98.6 4.1E-06 1.4E-10 90.3 24.3 264 102-384 112-525 (571)
261 2xe4_A Oligopeptidase B; hydro 98.6 9.1E-06 3.1E-10 90.0 27.4 244 138-415 175-465 (751)
262 3v9f_A Two-component system se 98.6 0.00036 1.2E-08 76.7 39.7 314 96-481 163-519 (781)
263 1k3i_A Galactose oxidase precu 98.6 9.3E-06 3.2E-10 88.1 25.2 265 105-385 198-530 (656)
264 3tc9_A Hypothetical hydrolase; 98.5 0.00011 3.9E-09 76.2 30.7 236 99-348 140-428 (430)
265 3tc9_A Hypothetical hydrolase; 98.5 4.6E-05 1.6E-09 79.1 26.9 257 191-484 135-427 (430)
266 3v65_B Low-density lipoprotein 98.5 0.00024 8.2E-09 72.4 31.3 227 114-359 95-328 (386)
267 3v65_B Low-density lipoprotein 98.5 0.0001 3.5E-09 75.1 28.5 207 191-416 114-327 (386)
268 4hw6_A Hypothetical protein, I 98.5 8.1E-05 2.8E-09 77.5 27.9 258 191-484 137-430 (433)
269 3v64_C Agrin; beta propeller, 98.5 0.00072 2.5E-08 67.9 33.6 226 115-359 53-285 (349)
270 2ece_A 462AA long hypothetical 98.5 6.2E-05 2.1E-09 79.8 26.7 225 105-339 96-399 (462)
271 1ijq_A LDL receptor, low-densi 98.4 0.0003 1E-08 69.4 29.9 182 214-414 9-201 (316)
272 1flg_A Protein (quinoprotein e 98.4 3.8E-05 1.3E-09 83.1 25.1 222 107-339 170-547 (582)
273 1ijq_A LDL receptor, low-densi 98.4 0.0004 1.4E-08 68.5 30.4 205 192-417 29-248 (316)
274 3v64_C Agrin; beta propeller, 98.4 0.00038 1.3E-08 69.9 30.6 182 214-414 52-240 (349)
275 1k3i_A Galactose oxidase precu 98.4 3.8E-05 1.3E-09 83.3 24.2 214 197-414 190-448 (656)
276 2xbg_A YCF48-like protein; pho 98.4 0.00057 2E-08 67.7 30.7 265 94-404 34-319 (327)
277 2xe4_A Oligopeptidase B; hydro 98.4 3.6E-06 1.2E-10 93.2 16.1 185 195-385 176-387 (751)
278 1w6s_A Methanol dehydrogenase 98.4 9E-05 3.1E-09 80.8 25.8 159 197-357 110-350 (599)
279 3p5b_L Low density lipoprotein 98.3 0.0026 8.9E-08 65.2 34.0 230 114-360 91-331 (400)
280 3p5b_L Low density lipoprotein 98.3 0.00091 3.1E-08 68.6 29.8 206 192-416 111-329 (400)
281 4hw6_A Hypothetical protein, I 98.3 0.00063 2.2E-08 70.7 28.9 235 99-348 142-431 (433)
282 2ism_A Putative oxidoreductase 98.2 0.00033 1.1E-08 70.5 25.0 141 192-339 30-221 (352)
283 3s94_A LRP-6, low-density lipo 98.2 0.0059 2E-07 66.5 36.5 287 97-415 85-430 (619)
284 3sov_A LRP-6, low-density lipo 98.2 0.0012 4E-08 65.8 28.3 226 168-416 13-247 (318)
285 3kya_A Putative phosphatase; s 98.2 0.001 3.5E-08 71.2 28.6 248 99-356 142-482 (496)
286 3kya_A Putative phosphatase; s 98.1 0.00034 1.2E-08 74.9 23.9 262 191-484 137-472 (496)
287 2xbg_A YCF48-like protein; pho 98.1 0.0091 3.1E-07 59.0 32.7 269 136-484 35-319 (327)
288 3sov_A LRP-6, low-density lipo 98.1 0.0052 1.8E-07 61.1 30.1 227 114-359 12-248 (318)
289 3amr_A 3-phytase; beta-propell 98.0 0.0018 6.2E-08 66.5 24.7 190 208-415 43-272 (355)
290 3m0c_C LDL receptor, low-densi 98.0 0.0036 1.2E-07 70.5 28.8 206 192-416 423-641 (791)
291 3m0c_C LDL receptor, low-densi 97.9 0.018 6E-07 64.8 33.8 228 114-359 403-642 (791)
292 3a9g_A Putative uncharacterize 97.9 0.0088 3E-07 60.3 27.5 142 192-339 28-216 (354)
293 4a0p_A LRP6, LRP-6, low-densit 97.8 0.031 1.1E-06 61.0 32.5 227 113-358 13-246 (628)
294 4a0p_A LRP6, LRP-6, low-densit 97.8 0.02 6.8E-07 62.5 29.9 177 213-407 13-197 (628)
295 1n7d_A LDL receptor, low-densi 97.7 0.00013 4.4E-09 80.7 11.8 205 192-416 405-623 (699)
296 3s94_A LRP-6, low-density lipo 97.7 0.0072 2.4E-07 65.9 24.9 205 192-416 39-252 (619)
297 1n7d_A LDL receptor, low-densi 97.7 0.00011 3.7E-09 81.2 10.6 183 213-414 384-577 (699)
298 2ism_A Putative oxidoreductase 97.7 0.012 4E-07 59.1 24.3 220 138-384 32-333 (352)
299 3qqz_A Putative uncharacterize 97.6 0.027 9.2E-07 55.0 25.1 186 195-385 29-242 (255)
300 3qqz_A Putative uncharacterize 97.5 0.021 7.2E-07 55.8 23.2 185 137-339 27-242 (255)
301 2g8s_A Glucose/sorbosone dehyd 97.4 0.081 2.8E-06 53.1 26.5 143 191-339 16-216 (353)
302 3das_A Putative oxidoreductase 97.4 0.12 4E-06 52.7 27.8 145 191-339 30-220 (347)
303 3amr_A 3-phytase; beta-propell 97.4 0.031 1.1E-06 57.4 22.6 171 257-484 50-260 (355)
304 3a9g_A Putative uncharacterize 97.3 0.028 9.6E-07 56.6 20.8 138 234-383 29-215 (354)
305 2p9w_A MAL S 1 allergenic prot 97.0 0.066 2.3E-06 54.5 20.4 172 193-407 13-215 (334)
306 3sre_A PON1, serum paraoxonase 96.6 0.41 1.4E-05 48.8 23.0 158 236-409 52-255 (355)
307 3sre_A PON1, serum paraoxonase 96.4 0.96 3.3E-05 46.0 24.6 181 194-384 51-285 (355)
308 2p9w_A MAL S 1 allergenic prot 95.9 0.63 2.1E-05 47.3 19.7 157 282-484 17-212 (334)
309 3das_A Putative oxidoreductase 95.8 1.9 6.6E-05 43.7 27.4 228 99-339 35-326 (347)
310 3s25_A Hypothetical 7-bladed b 95.1 2.8 9.6E-05 41.2 24.4 241 103-382 23-278 (302)
311 1cru_A Protein (soluble quinop 95.1 2.5 8.4E-05 44.0 21.4 154 191-348 25-257 (454)
312 2wg3_C Hedgehog-interacting pr 95.0 0.42 1.4E-05 50.3 15.3 74 312-385 5-92 (463)
313 1cru_A Protein (soluble quinop 94.9 0.78 2.7E-05 47.8 17.1 73 313-385 19-100 (454)
314 3ei3_A DNA damage-binding prot 94.9 7.9 0.00027 45.3 38.7 215 213-483 713-995 (1158)
315 2g8s_A Glucose/sorbosone dehyd 94.7 3.7 0.00013 40.8 26.4 234 99-339 21-341 (353)
316 3s25_A Hypothetical 7-bladed b 94.7 3.5 0.00012 40.5 21.3 160 203-384 62-241 (302)
317 3ei3_A DNA damage-binding prot 94.4 7 0.00024 45.7 25.0 233 106-348 707-997 (1158)
318 3pbp_A Nucleoporin NUP82; beta 94.3 4.2 0.00014 42.9 20.5 152 288-481 30-206 (452)
319 2vpj_A Kelch-like protein 12; 93.5 5 0.00017 37.7 21.2 194 204-410 62-281 (301)
320 3pbp_A Nucleoporin NUP82; beta 92.6 4.2 0.00014 42.9 17.3 129 202-335 29-194 (452)
321 2xn4_A Kelch-like protein 2; s 91.8 8.5 0.00029 36.2 19.5 195 204-410 61-279 (302)
322 1tl2_A L10, protein (tachylect 90.8 3.3 0.00011 40.2 13.1 67 320-405 40-114 (236)
323 4gq2_M Nucleoporin NUP120; bet 90.7 9.4 0.00032 43.6 18.9 34 197-231 240-273 (950)
324 3ott_A Two-component system se 89.9 24 0.00083 38.1 37.7 257 95-383 21-296 (758)
325 4gq2_M Nucleoporin NUP120; bet 89.9 1.1 3.8E-05 51.2 10.5 37 368-415 238-274 (950)
326 3ii7_A Kelch-like protein 7; p 89.8 13 0.00045 34.9 22.7 193 205-410 12-228 (306)
327 2vpj_A Kelch-like protein 12; 89.8 13 0.00045 34.8 24.1 221 115-349 31-277 (301)
328 3ii7_A Kelch-like protein 7; p 88.9 16 0.00053 34.4 21.5 194 204-410 55-275 (306)
329 1zgk_A Kelch-like ECH-associat 88.5 17 0.00058 34.4 18.5 192 204-411 70-291 (308)
330 2wg3_C Hedgehog-interacting pr 88.0 9.6 0.00033 39.9 15.3 113 269-385 5-158 (463)
331 2xn4_A Kelch-like protein 2; s 86.7 21 0.00071 33.5 23.8 194 205-411 16-233 (302)
332 2xzh_A Clathrin heavy chain 1; 86.2 32 0.0011 35.2 29.6 198 202-418 75-301 (365)
333 1bpo_A Protein (clathrin); cla 84.9 44 0.0015 35.6 28.6 198 202-418 74-300 (494)
334 2be1_A Serine/threonine-protei 83.6 11 0.00038 38.0 12.7 110 208-318 13-139 (339)
335 3sbq_A Nitrous-oxide reductase 83.0 5.7 0.0002 43.4 10.6 101 301-418 299-429 (638)
336 1tl2_A L10, protein (tachylect 82.7 6.8 0.00023 37.9 10.1 126 106-250 5-151 (236)
337 1xi4_A Clathrin heavy chain; a 82.3 26 0.00088 42.4 16.5 196 202-415 74-297 (1630)
338 1zgk_A Kelch-like ECH-associat 80.2 40 0.0014 31.8 19.7 195 203-411 23-244 (308)
339 4fhn_B Nucleoporin NUP120; pro 78.8 1.5 5E-05 51.0 4.6 37 368-415 240-276 (1139)
340 4fhn_B Nucleoporin NUP120; pro 78.8 13 0.00046 43.0 12.7 34 197-231 242-275 (1139)
341 2uvk_A YJHT; unknown function, 74.6 58 0.002 31.1 14.3 146 257-417 168-352 (357)
342 3zwu_A Alkaline phosphatase PH 73.2 10 0.00034 41.3 9.0 69 368-474 478-548 (592)
343 3ott_A Two-component system se 72.9 1.1E+02 0.0036 33.0 40.6 258 95-383 62-341 (758)
344 4asc_A Kelch repeat and BTB do 72.1 66 0.0023 30.2 20.2 204 203-413 44-283 (315)
345 3q6k_A 43.2 kDa salivary prote 71.2 96 0.0033 31.7 20.4 101 258-385 124-243 (381)
346 2xzh_A Clathrin heavy chain 1; 71.0 97 0.0033 31.7 19.5 122 288-418 76-199 (365)
347 2be1_A Serine/threonine-protei 69.9 10 0.00035 38.2 7.7 113 290-417 10-140 (339)
348 3sbq_A Nitrous-oxide reductase 69.8 27 0.00092 38.2 11.2 97 282-385 327-454 (638)
349 3f7f_A Nucleoporin NUP120; nuc 69.5 4.4 0.00015 45.3 5.2 32 374-416 228-259 (729)
350 4a9v_A PHOX; hydrolase, beta-p 67.6 18 0.00061 39.4 9.4 71 368-475 478-549 (592)
351 4hvt_A Ritya.17583.B, post-pro 67.4 1.5E+02 0.0052 32.5 27.8 249 138-416 130-437 (711)
352 3f7f_A Nucleoporin NUP120; nuc 62.1 9.7 0.00033 42.5 6.2 36 98-133 224-259 (729)
353 4a9v_A PHOX; hydrolase, beta-p 59.9 41 0.0014 36.7 10.4 68 319-390 474-555 (592)
354 4asc_A Kelch repeat and BTB do 59.5 1.2E+02 0.004 28.5 24.9 217 115-339 13-251 (315)
355 2zwa_A Leucine carboxyl methyl 58.0 2.1E+02 0.0071 31.0 19.9 203 203-411 396-639 (695)
356 3zwu_A Alkaline phosphatase PH 57.6 50 0.0017 35.8 10.7 67 320-390 475-555 (592)
357 3pg0_A Threefoil; symmetric de 54.8 79 0.0027 27.3 9.9 104 298-416 25-139 (165)
358 4hvt_A Ritya.17583.B, post-pro 52.5 2.7E+02 0.0091 30.6 15.8 229 113-351 154-431 (711)
359 1xi4_A Clathrin heavy chain; a 48.7 2.7E+02 0.0091 33.9 15.5 138 214-361 47-199 (1630)
360 2zwa_A Leucine carboxyl methyl 45.6 2.9E+02 0.01 29.8 14.5 180 204-385 451-674 (695)
361 3q6k_A 43.2 kDa salivary prote 44.5 2.7E+02 0.0092 28.3 21.2 159 217-385 125-343 (381)
362 2woz_A Kelch repeat and BTB do 41.6 2.2E+02 0.0076 26.5 21.8 133 204-339 109-261 (318)
363 2uvk_A YJHT; unknown function, 41.6 2.3E+02 0.008 26.8 16.9 53 301-353 286-346 (357)
364 3uc1_A DNA gyrase subunit A; D 36.2 3.2E+02 0.011 26.8 12.7 123 92-226 91-230 (327)
365 2woz_A Kelch repeat and BTB do 35.4 2.8E+02 0.0095 25.8 23.4 189 206-410 17-234 (318)
366 3vsf_A Ricin B lectin; GH43 CB 33.7 2E+02 0.0069 30.0 10.6 105 297-416 358-473 (526)
367 1sr4_A CDT A, cytolethal diste 33.5 2.3E+02 0.0079 26.7 9.7 83 217-316 71-166 (206)
368 3b7f_A Glycosyl hydrolase, BNR 29.4 4E+02 0.014 25.8 16.4 21 321-341 55-77 (394)
369 3a0c_A Mannose/sialic acid-bin 28.3 2.4E+02 0.0082 22.9 10.5 45 324-381 53-97 (110)
370 1bpo_A Protein (clathrin); cla 24.6 6.5E+02 0.022 26.7 27.5 139 213-361 46-199 (494)
371 3mez_B Mannose-specific lectin 24.2 2.7E+02 0.0092 22.8 7.7 52 297-349 31-83 (113)
372 1suu_A DNA gyrase subunit A; t 23.3 5.1E+02 0.017 25.0 21.6 191 104-308 7-230 (312)
373 3uc1_A DNA gyrase subunit A; D 23.1 5.4E+02 0.018 25.2 20.5 195 105-308 3-227 (327)
374 1sr4_A CDT A, cytolethal diste 23.0 1.4E+02 0.0048 28.2 6.2 101 291-416 60-168 (206)
375 1zvt_A Topoisomerase IV subuni 21.9 4.3E+02 0.015 24.9 9.6 110 106-225 3-115 (256)
376 3b7f_A Glycosyl hydrolase, BNR 21.1 5.6E+02 0.019 24.7 24.7 152 231-384 52-251 (394)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6e-53 Score=452.31 Aligned_cols=362 Identities=9% Similarity=0.116 Sum_probs=279.9
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCc--EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeE
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQ--RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRS 169 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~--~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t 169 (485)
|...|..++|+ |++||+++.||+|+|||+.+++ ++.++.+ |...|++|+|+|||+.||+++.+.... .+
T Consensus 58 h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~-~~~~v~~v~fs~dg~~l~~~~~~~~~~------~~ 130 (611)
T 1nr0_A 58 HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERF------GH 130 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEEC-SSSCEEEEEECTTSCEEEEEECCSSCS------EE
T ss_pred CCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecc-cCCceEEEEECCCCCEEEEEECCCCce------eE
Confidence 34445555555 9999999999999999987654 4556666 888999999999999999987532222 47
Q ss_pred EEEeEeccCCcCcccceeeeccccCceEEEEeCCCCe-EEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCce
Q 011452 170 TRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIM 246 (485)
Q Consensus 170 ~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~-~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ 246 (485)
+++|+ .|+... .+. +|...+..|+|+ |+++ .|++++.|++|||||+.+++++.++.+ ..|++|+|||++.
T Consensus 131 v~~wd--~~~~~~---~l~-gh~~~v~~v~f~-p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 131 VFLFD--TGTSNG---NLT-GQARAMNSVDFK-PSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp EEETT--TCCBCB---CCC-CCSSCEEEEEEC-SSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred EEEee--CCCCcc---eec-CCCCCceEEEEC-CCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC
Confidence 88888 465422 222 355678899998 7876 699999999999999999999999865 4799999999877
Q ss_pred EEEEEcCCCCeeEEEEecCCCeEEEEee-------cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE-----
Q 011452 247 LLIFTKASGHVPLKILSIEDGTVLKSFN-------HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE----- 314 (485)
Q Consensus 247 ll~sss~~~D~tIklWdi~tG~~L~tl~-------~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~----- 314 (485)
++++++. |++|+|||+.+|+++.+|. +|.+.+..|+|+ |++.+|++++.|++|||||+++++++.
T Consensus 204 ~las~s~--D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 204 LFASTGG--DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS-PDGTKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp EEEEEET--TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEEEC--CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 7776654 5899999999999999995 799999999997 788999999999999999999887654
Q ss_pred --------------------------------------ecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEE
Q 011452 315 --------------------------------------VSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 354 (485)
Q Consensus 315 --------------------------------------~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~ 354 (485)
++.+|...|++++|+|||++|+|++ |++|++||+. |++..
T Consensus 281 ~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 281 TRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp SSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 3458999999999999999999999 9999999996 77765
Q ss_pred Ee-ecCCCC--------------------------------------------------CC-------------------
Q 011452 355 SF-EDHLLW--------------------------------------------------HP------------------- 364 (485)
Q Consensus 355 tl-~gH~~~--------------------------------------------------~~------------------- 364 (485)
.+ .+|... .+
T Consensus 361 ~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~ 440 (611)
T 1nr0_A 361 VFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG 440 (611)
T ss_dssp CSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETT
T ss_pred ecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCC
Confidence 54 233210 00
Q ss_pred -------CCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE--EEEecCCCCCCCCcccccCCCCCCC
Q 011452 365 -------DCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC--LAKIRASNGLPAENECSCSGDYSSG 435 (485)
Q Consensus 365 -------~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~--l~tl~gH~~~~~~~~~~~~~~~~~~ 435 (485)
...+++++|||||++||+|+. |++|+|||+.++++ +.+ .+|.. .....+.+++++++.
T Consensus 441 ~~~~~~~~~~v~~va~spdg~~lasgs~-----------D~~v~lwd~~~~~~~~~~~-~~h~~-~v~~v~fspdg~~la 507 (611)
T 1nr0_A 441 KLTEVPISYNSSCVALSNDKQFVAVGGQ-----------DSKVHVYKLSGASVSEVKT-IVHPA-EITSVAFSNNGAFLV 507 (611)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEET-----------TSEEEEEEEETTEEEEEEE-EECSS-CEEEEEECTTSSEEE
T ss_pred ceeeeecCCCceEEEEeCCCCEEEEeCC-----------CCeEEEEEccCCceeeeec-cCCCC-ceEEEEECCCCCEEE
Confidence 012678999999999999997 79999999988764 455 67874 334566667776555
Q ss_pred Cccccccccccccc------c--chhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 436 SCNVKKHSHASRIR------S--TVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 436 ~~~~~~~~~~~~~~------~--~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
++..+......... . ....+...|++|+|||||++|||||.|++||||+.
T Consensus 508 s~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 508 ATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp EEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 44332221111111 0 01114468999999999999999999999999984
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.9e-53 Score=453.77 Aligned_cols=318 Identities=11% Similarity=0.121 Sum_probs=267.0
Q ss_pred cccceEEEEEe--cC-EEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEE
Q 011452 94 KRSKIIEIVAA--RD-IVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (485)
Q Consensus 94 ~~s~V~~i~~s--~~-~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~ 170 (485)
|...|..|.|+ ++ +||+++.|+++++|+..+++++.++.+ |...|++|+|+|||++||++|. | +++
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~-H~~~V~~v~fspdg~~las~s~----D------~~i 214 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRYNPDGSLFASTGG----D------GTI 214 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-CSSCEEEEEECTTSSEEEEEET----T------SCE
T ss_pred CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc-ccCceEEEEECCCCCEEEEEEC----C------CcE
Confidence 56679999999 44 699999999999999999999999987 8889999999999999999874 4 599
Q ss_pred EEeEeccCCcCcccceeee------ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE-------------
Q 011452 171 RIEYIRRGKPDAGFALFES------ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI------------- 231 (485)
Q Consensus 171 ~lw~i~~G~~~~~~~lf~~------~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl------------- 231 (485)
+||++.+|++.. .+.. .|...+..|+|+ |||++|++++.|++|||||+.+++++.++
T Consensus 215 ~lwd~~~g~~~~---~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 215 VLYNGVDGTKTG---VFEDDSLKNVAHSGSVFGLTWS-PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp EEEETTTCCEEE---ECBCTTSSSCSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred EEEECCCCcEee---eeccccccccccCCCEEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 999998888632 2321 355677899998 79999999999999999999998876543
Q ss_pred --------------------------------cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEe-ecCC-
Q 011452 232 --------------------------------SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSF-NHLL- 277 (485)
Q Consensus 232 --------------------------------~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl-~~~~- 277 (485)
|...|.+++|||++.++++++. |++|++||+++|+++..+ .+|.
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~--D~~v~~Wd~~~~~~~~~~~~~h~~ 368 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA--EGHINSWDISTGISNRVFPDVHAT 368 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCCEEECSSCSCSS
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC--CCcEEEEECCCCceeeecccCCcc
Confidence 2347999999997777776554 589999999998876654 1221
Q ss_pred --------------------------------------------------------------------------------
Q 011452 278 -------------------------------------------------------------------------------- 277 (485)
Q Consensus 278 -------------------------------------------------------------------------------- 277 (485)
T Consensus 369 ~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~ 448 (611)
T 1nr0_A 369 MITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPIS 448 (611)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECS
T ss_pred eEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecC
Confidence
Q ss_pred cceeEEEEEecCCCEEEEEeCCCcEEEEECCCCee--EEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC--CcE
Q 011452 278 HRNKKVDFIEQFNEKLLVKQENENLQILDVRNFEL--TEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR--GEL 352 (485)
Q Consensus 278 ~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~--~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~--G~l 352 (485)
..+.+|+|+ |++..|++++.|++|+|||+.++++ +.. .+|...|.+++|+|||++||+++ |++|++||+. +++
T Consensus 449 ~~v~~va~s-pdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~ 526 (611)
T 1nr0_A 449 YNSSCVALS-NDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL 526 (611)
T ss_dssp SCEEEEEEC-TTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE
T ss_pred CCceEEEEe-CCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCce
Confidence 224567775 7788899999999999999998765 344 68999999999999999999999 9999999994 677
Q ss_pred EEE--eecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe-EE-EEecCC-CCCCCCcccc
Q 011452 353 VTS--FEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK-CL-AKIRAS-NGLPAENECS 427 (485)
Q Consensus 353 l~t--l~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk-~l-~tl~gH-~~~~~~~~~~ 427 (485)
+.+ +.+|... |++|+|||||++|||++. |++|||||+.+++ ++ ..+.+| .
T Consensus 527 ~~~~~~~~H~~~-----V~~v~fspdg~~lasgs~-----------D~~v~lW~~~~~~~~~~~~~~~h~~--------- 581 (611)
T 1nr0_A 527 AHTNSWTFHTAK-----VACVSWSPDNVRLATGSL-----------DNSVIVWNMNKPSDHPIIIKGAHAM--------- 581 (611)
T ss_dssp SCCCCCCCCSSC-----EEEEEECTTSSEEEEEET-----------TSCEEEEETTCTTSCCEEETTSSTT---------
T ss_pred eeeeeeeecccc-----eeEEEECCCCCEEEEEEC-----------CCcEEEEECCCcccccchhhccCcc---------
Confidence 665 3458877 999999999999999997 7999999999875 44 678888 5
Q ss_pred cCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 428 CSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
..|++|+|+|||+ |+||+.|++||||+.
T Consensus 582 -----------------------------~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 582 -----------------------------SSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp -----------------------------SCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred -----------------------------cCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 2899999999999 999999999999984
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.1e-52 Score=432.10 Aligned_cols=313 Identities=13% Similarity=0.222 Sum_probs=276.9
Q ss_pred ccccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEE
Q 011452 93 RKRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (485)
Q Consensus 93 ~~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~ 170 (485)
.+..+|..|.|+ ++.|++++.|+++++|+.. ++++.++.+ |...|++++|+|+|+.|++++. | +++
T Consensus 260 ~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~~~----d------~~i 327 (577)
T 2ymu_A 260 GHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTG-HSSSVWGVAFSPDGQTIASASD----D------KTV 327 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECC-CSSCEEEEEECTTSSEEEEEET----T------SCE
T ss_pred cCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEec-CCCCeEEEEECCCCCEEEEEeC----C------CeE
Confidence 467889999998 8999999999999999965 899998887 8889999999999999999773 4 589
Q ss_pred EEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEE
Q 011452 171 RIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLL 248 (485)
Q Consensus 171 ~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll 248 (485)
++|++...++ ..+. .+...+..++|+ |+|++|++++.|++|+|||. +++++.++. ...|.+|+|||++.++
T Consensus 328 ~~w~~~~~~~----~~~~-~~~~~v~~~~~s-~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 328 KLWNRNGQHL----QTLT-GHSSSVWGVAFS-PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 400 (577)
T ss_dssp EEEETTSCEE----EEEC-CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred EEEeCCCCee----EEEe-CCCCCEEEEEEC-CCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 9999643332 1222 234556789998 89999999999999999995 678888775 4689999999977766
Q ss_pred EEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEE
Q 011452 249 IFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIF 328 (485)
Q Consensus 249 ~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaF 328 (485)
++++. |++|+|||. +|++++++.+|...+..++|+ |++..|++++.|++|+|||+ +++++..+.+|...|.+++|
T Consensus 401 ~~~~~--d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~ 475 (577)
T 2ymu_A 401 ASASD--DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS-PDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAF 475 (577)
T ss_dssp EEEET--TSEEEEECT-TCCEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEE
T ss_pred EEEeC--CCEEEEEeC-CCCEEEEecCCCCCeEEEEEC-CCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEE
Confidence 66543 489999995 789999999999999999996 78889999999999999996 57888999999999999999
Q ss_pred cCCCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 329 LYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 329 spdg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
+|||++||+++ |++|+|||.+|+++.+|++|... |++|+|||||++||+++. |++|+|||. +
T Consensus 476 spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~s~~~-----------dg~v~lwd~-~ 538 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS-----VRGVAFSPDGQTIASASD-----------DKTVKLWNR-N 538 (577)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSC-----EEEEEECTTSSCEEEEET-----------TSEEEEECT-T
T ss_pred cCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCC-----EEEEEEcCCCCEEEEEEC-----------cCEEEEEeC-C
Confidence 99999999999 99999999999999999999977 999999999999999987 799999995 7
Q ss_pred CeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 408 GKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 408 Gk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
|++++++.+|.+ .|++|+|+|||++|+|||.|++|+|||
T Consensus 539 ~~~~~~~~~h~~--------------------------------------~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 539 GQLLQTLTGHSS--------------------------------------SVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEEECCSS--------------------------------------CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEcCCCC--------------------------------------CEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999983 899999999999999999999999997
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.9e-51 Score=403.55 Aligned_cols=289 Identities=15% Similarity=0.199 Sum_probs=254.6
Q ss_pred CcEEEEeecCCcccEEEEEEeeC----CCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceEEE
Q 011452 125 NQRICFLNVTADEVIRSLFYNKN----NDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGFVE 199 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~spd----g~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~V~ 199 (485)
|.++..+.+ |.+.|++|+|+|+ +++|||+|. | ++++||++..+++.. .+.. ++...+.+|+
T Consensus 22 g~~~~~~~~-H~~~V~~v~~~~~~~~~~~~l~tgs~----D------~~v~vW~~~~~~~~~---~~~l~gh~~~v~~~~ 87 (321)
T 3ow8_A 22 GILFKQEQA-HDDAIWSVAWGTNKKENSETVVTGSL----D------DLVKVWKWRDERLDL---QWSLEGHQLGVVSVD 87 (321)
T ss_dssp EEEEEETTS-SSSCEEEEEEC-------CEEEEEET----T------SCEEEEEEETTEEEE---EEEECCCSSCEEEEE
T ss_pred hheeeeccc-CCCcEEEEEEecCCCCCCCEEEEEcC----C------CCEEEEECCCCCeee---eeeeccCCCCEEEEE
Confidence 445555665 8999999999985 678999874 4 599999987765421 1221 3455677899
Q ss_pred EeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCC
Q 011452 200 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL 277 (485)
Q Consensus 200 Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~ 277 (485)
|+ +++.+|++++.|++|||||+.+++++.++.. ..|.+++|+|++.++++++ .|++|++||+++++.+.++..|.
T Consensus 88 ~~-~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~--~dg~v~i~~~~~~~~~~~~~~~~ 164 (321)
T 3ow8_A 88 IS-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT--HVGKVNIFGVESGKKEYSLDTRG 164 (321)
T ss_dssp EC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEEC--TTSEEEEEETTTCSEEEEEECSS
T ss_pred EC-CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEc--CCCcEEEEEcCCCceeEEecCCC
Confidence 98 7999999999999999999999999988864 4789999999777776654 45899999999999999999988
Q ss_pred cceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEE
Q 011452 278 HRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTS 355 (485)
Q Consensus 278 ~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~t 355 (485)
..+..++|+ |++..|++++.|++|+|||+++++++.++.+|...|.+++|+||+++|+|++ |++|+|||++ ++++.+
T Consensus 165 ~~v~~~~~s-pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 165 KFILSIAYS-PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 243 (321)
T ss_dssp SCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE
T ss_pred ceEEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE
Confidence 899999997 7888999999999999999999999999999999999999999999999999 9999999996 999999
Q ss_pred eecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCC
Q 011452 356 FEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSG 435 (485)
Q Consensus 356 l~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~ 435 (485)
+.+|..+ |.+++|+|||++|+|++. |++|+|||+.+++|+.++.+|.+
T Consensus 244 ~~~h~~~-----v~~~~~sp~~~~l~s~s~-----------D~~v~iwd~~~~~~~~~~~~h~~---------------- 291 (321)
T 3ow8_A 244 LSGHASW-----VLNVAFCPDDTHFVSSSS-----------DKSVKVWDVGTRTCVHTFFDHQD---------------- 291 (321)
T ss_dssp ECCCSSC-----EEEEEECTTSSEEEEEET-----------TSCEEEEETTTTEEEEEECCCSS----------------
T ss_pred EcCCCCc-----eEEEEECCCCCEEEEEeC-----------CCcEEEEeCCCCEEEEEEcCCCC----------------
Confidence 9999988 999999999999999997 79999999999999999999973
Q ss_pred CccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 436 SCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.|++|+|+|||+.|+||+.|++|+|||.
T Consensus 292 ----------------------~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 292 ----------------------QVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp ----------------------CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred ----------------------cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 8999999999999999999999999984
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-51 Score=419.08 Aligned_cols=295 Identities=15% Similarity=0.250 Sum_probs=261.6
Q ss_pred EEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCce
Q 011452 117 CAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPG 196 (485)
Q Consensus 117 iklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~ 196 (485)
.+.|... .....++.+ |...|++++|+|+++.||++|. | ++++||++.+|++.. .+. +|...+.
T Consensus 91 ~~~~~~~-~~~~~~l~g-h~~~V~~~~~~p~~~~l~s~s~----D------g~i~vwd~~~~~~~~---~l~-~h~~~V~ 154 (410)
T 1vyh_C 91 PKEWIPR-PPEKYALSG-HRSPVTRVIFHPVFSVMVSASE----D------ATIKVWDYETGDFER---TLK-GHTDSVQ 154 (410)
T ss_dssp -CCCCCC-SSCSCEEEC-CSSCEEEEEECSSSSEEEEEES----S------SCEEEEETTTCCCCE---EEC-CCSSCEE
T ss_pred ccccccC-CCceEeecc-cCCcEEEEEEcCCCCEEEEEeC----C------CeEEEEECCCCcEEE---EEe-ccCCcEE
Confidence 4455433 344556776 8889999999999999999884 3 599999999998732 333 3556778
Q ss_pred EEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEee
Q 011452 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~ 274 (485)
.|+|+ |+|++|++|+.|++|||||+.+++++.++.+ +.|.+|+|+|++.++++++ .|++|++||+++|+++++|.
T Consensus 155 ~v~~~-~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s--~D~~i~~wd~~~~~~~~~~~ 231 (410)
T 1vyh_C 155 DISFD-HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS--RDKTIKMWEVQTGYCVKTFT 231 (410)
T ss_dssp EEEEC-TTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEE
T ss_pred EEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEe
Confidence 99998 7999999999999999999999999998864 5899999999776666654 45899999999999999999
Q ss_pred cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCC--------------------CcE
Q 011452 275 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE--------------------NQL 334 (485)
Q Consensus 275 ~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspd--------------------g~l 334 (485)
+|...+..++|+ +++..+++++.|++|+|||+.++++...+.+|...|.+++|+|+ |.+
T Consensus 232 ~h~~~v~~~~~~-~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 310 (410)
T 1vyh_C 232 GHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF 310 (410)
T ss_dssp CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE
T ss_pred CCCccEEEEEEC-CCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE
Confidence 999999999996 77888999999999999999999999999999999999999997 678
Q ss_pred EEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEE
Q 011452 335 FLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLA 412 (485)
Q Consensus 335 laS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~ 412 (485)
|+|++ |++|+|||++ |+++.++.+|..+ |++|+|+|+|++|+|++. |++|+|||+.+++|+.
T Consensus 311 l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~-----v~~v~~~~~g~~l~s~s~-----------D~~i~vwd~~~~~~~~ 374 (410)
T 1vyh_C 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-----VRGVLFHSGGKFILSCAD-----------DKTLRVWDYKNKRCMK 374 (410)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSC-----EEEEEECSSSSCEEEEET-----------TTEEEEECCTTSCCCE
T ss_pred EEEEeCCCeEEEEECCCCceEEEEECCCCc-----EEEEEEcCCCCEEEEEeC-----------CCeEEEEECCCCceEE
Confidence 99999 9999999996 9999999999988 999999999999999997 7999999999999999
Q ss_pred EecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 413 KIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 413 tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
++.+|.+ .|++|+|+|+++.|||||.|++|+||+.
T Consensus 375 ~~~~h~~--------------------------------------~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 375 TLNAHEH--------------------------------------FVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEECCSS--------------------------------------CEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEcCCCC--------------------------------------cEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999983 8999999999999999999999999984
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.1e-50 Score=396.55 Aligned_cols=288 Identities=12% Similarity=0.169 Sum_probs=251.5
Q ss_pred CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC
Q 011452 125 NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN 204 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn 204 (485)
.++..+|.+ |...|++++|+|||+.|+++|. | ++++||++.+++... .+. .+..++..++|+ |+
T Consensus 45 ~~~~~~l~g-H~~~v~~~~~s~d~~~l~s~s~----D------g~v~iWd~~~~~~~~---~~~-~~~~~v~~~~~s-~~ 108 (340)
T 1got_B 45 MRTRRTLRG-HLAKIYAMHWGTDSRLLLSASQ----D------GKLIIWDSYTTNKVH---AIP-LRSSWVMTCAYA-PS 108 (340)
T ss_dssp CCEEEEECC-CSSCEEEEEECTTSSEEEEEET----T------TEEEEEETTTCCEEE---EEE-CSSSCEEEEEEC-TT
T ss_pred chhheeecC-CCCceEEEEECCCCCEEEEEeC----C------CcEEEEECCCCCcce---Eee-cCCccEEEEEEC-CC
Confidence 345667887 8889999999999999999874 4 599999998887632 222 244567789998 79
Q ss_pred CeEEEEeeCCCcEEEeecCCCe----EEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCc
Q 011452 205 GKVLTYSAQDSIYKVFDLKNYT----MLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH 278 (485)
Q Consensus 205 G~~Las~s~D~tiKlWdl~~g~----~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~ 278 (485)
|++|++++.|++|+|||+.+++ ....+. ...|.+++|+|++.+++++ .|++|+|||+++|+++.++.+|..
T Consensus 109 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s---~d~~i~~wd~~~~~~~~~~~~h~~ 185 (340)
T 1got_B 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSS---GDTTCALWDIETGQQTTTFTGHTG 185 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEE---TTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEE---CCCcEEEEECCCCcEEEEEcCCCC
Confidence 9999999999999999998753 455554 4589999999988877663 458999999999999999999999
Q ss_pred ceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEe
Q 011452 279 RNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF 356 (485)
Q Consensus 279 ~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl 356 (485)
.+..++|+ |++..+++++.|++|+|||+++++++.++.+|...|.+++|+|++++|+|++ |++|+|||++ ++++.++
T Consensus 186 ~v~~~~~~-~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 186 DVMSLSLA-PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceEEEEEC-CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 99999997 6788889999999999999999999999999999999999999999999999 9999999996 8888887
Q ss_pred ecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCC
Q 011452 357 EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGS 436 (485)
Q Consensus 357 ~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~ 436 (485)
..+.. .+.|.+++|+|||++|++|+. |++|+|||+.+++++.++.+|.+
T Consensus 265 ~~~~~---~~~v~~~~~s~~g~~l~~g~~-----------d~~i~vwd~~~~~~~~~~~~h~~----------------- 313 (340)
T 1got_B 265 SHDNI---ICGITSVSFSKSGRLLLAGYD-----------DFNCNVWDALKADRAGVLAGHDN----------------- 313 (340)
T ss_dssp CCTTC---CSCEEEEEECTTSSEEEEEET-----------TSEEEEEETTTCCEEEEEECCSS-----------------
T ss_pred ccCCc---ccceEEEEECCCCCEEEEECC-----------CCeEEEEEcccCcEeeEeecCCC-----------------
Confidence 63321 123899999999999999997 79999999999999999999983
Q ss_pred ccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 437 CNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
.|++|+|+|||+.|||||.|++|+|||
T Consensus 314 ---------------------~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 314 ---------------------RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ---------------------CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ---------------------cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 899999999999999999999999997
No 7
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.5e-50 Score=415.03 Aligned_cols=313 Identities=13% Similarity=0.231 Sum_probs=276.5
Q ss_pred ccccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEE
Q 011452 93 RKRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (485)
Q Consensus 93 ~~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~ 170 (485)
.+..+|..++|+ +++|++++.|+++++|+.. ++++.++.+ |...|.+++|+|||+.|++++. | +++
T Consensus 219 ~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~~~~~-~~~~v~~v~~~~d~~~l~~~~~----d------~~i 286 (577)
T 2ymu_A 219 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTG-HSSSVNGVAFRPDGQTIASASD----D------KTV 286 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECC-CSSCEEEEEECTTSSEEEEEET----T------SCE
T ss_pred cCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEEec-CCCCEEEEEEcCCCCEEEEEeC----C------CEE
Confidence 367789999998 8899999999999999965 999998887 8889999999999999999773 4 589
Q ss_pred EEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEE
Q 011452 171 RIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLL 248 (485)
Q Consensus 171 ~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll 248 (485)
++|+. .+++. ..+. .+...+..++|+ |+|++|++++.|++|++||+.+ ..+.++. ...|.+++|+|++.++
T Consensus 287 ~~w~~-~~~~~---~~~~-~h~~~v~~~~~~-~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 287 KLWNR-NGQLL---QTLT-GHSSSVWGVAFS-PDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp EEEET-TSCEE---EEEC-CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEeC-CCcEE---EEEe-cCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEE
Confidence 99994 66652 1222 345567789998 7999999999999999999765 4455554 4689999999977776
Q ss_pred EEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEE
Q 011452 249 IFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIF 328 (485)
Q Consensus 249 ~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaF 328 (485)
++++. |++|+|||. +|+++.++.+|...+..|+|+ |++..|++++.|++|+|||. ++++++++.+|...|.+++|
T Consensus 360 ~~~~~--dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s-~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 360 ASASD--DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp EEEET--TSEEEEEET-TCCEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEE
T ss_pred EEEeC--CCEEEEEcC-CCCEEEEecCCCCCeEEEEEC-CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEE
Confidence 66543 489999995 789999999999999999996 78889999999999999995 58889999999999999999
Q ss_pred cCCCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 329 LYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 329 spdg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
+||+++|++++ |++|++||.+++++.++.+|... |.+++|+|||++||+++. |++|+||| .+
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~-----v~~~~~spd~~~las~~~-----------d~~i~iw~-~~ 497 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSS-----VRGVAFSPDGQTIASASD-----------DKTVKLWN-RN 497 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSC-----EEEEEECTTSCEEEEEET-----------TSEEEEEE-TT
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCC-----EEEEEEcCCCCEEEEEeC-----------CCEEEEEc-CC
Confidence 99999999999 99999999999999999999977 999999999999999997 79999999 57
Q ss_pred CeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 408 GKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 408 Gk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
|++++++.+|.+ .|++|+|+|||++||||+.|++|+|||
T Consensus 498 ~~~~~~~~~h~~--------------------------------------~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 498 GQLLQTLTGHSS--------------------------------------SVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp SCEEEEEECCSS--------------------------------------CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCEEEEEeCCCC--------------------------------------CEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 999999999973 899999999999999999999999998
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-50 Score=405.15 Aligned_cols=312 Identities=13% Similarity=0.112 Sum_probs=231.3
Q ss_pred CEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccc
Q 011452 106 DIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFA 185 (485)
Q Consensus 106 ~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~ 185 (485)
..+++.+.+...+.|++....+. .|+..|++|+|||||++||++|.+.. .+=-.++++|+..+|.+.....
T Consensus 17 ~~~~~~~g~~~~~~w~~p~~~p~-----~H~~~V~~v~fSpDG~~las~s~d~~----~~wd~~v~~~~~~~~~~~~~~~ 87 (357)
T 4g56_B 17 NLYFQSNGSSKGSAWGRPVTAPA-----CMEVQIGAVRYRRDGALLLAASSLSS----RTWGGSIWVFKDPEGAPNESLC 87 (357)
T ss_dssp ----------------------------CCCSEEEEEEECSSSCEEEEEECSSS----SSCCEEEEEESSCC---CGGGC
T ss_pred ceEEecCCCccccccCCCCCCcc-----cccCCEEEEEECCCCCEEEEEcCCCC----ccccCeEEEEECCCCCcceeEe
Confidence 45566677888899998754432 38889999999999999999885432 1111689999988887644322
Q ss_pred eeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEE----E--cCCcEEEEEEcCCceEEEEEcCCCCeeE
Q 011452 186 LFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS----I--SDKNVQEIKISPGIMLLIFTKASGHVPL 259 (485)
Q Consensus 186 lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~t----l--~~~~V~~VafSpg~~ll~sss~~~D~tI 259 (485)
....++...+..|+|+ |++++|+ ++.|++|||||+.+++++.. . |...|.+|+|||++.++++++ .|++|
T Consensus 88 ~~~~~~~~~V~~~~~s-~d~~~l~-~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs--~dg~v 163 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWV-SEKGILV-ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG--KDFSV 163 (357)
T ss_dssp SEEEECSSCEEEEEEE-TTTEEEE-EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE--TTSCE
T ss_pred cccCCCCCCEEEEEEc-CCCCEEE-EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe--CCCeE
Confidence 2222344557789998 6887765 67799999999999886532 2 345899999999777666655 45899
Q ss_pred EEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEec--ccCCCceEEEEEcCC-CcEEE
Q 011452 260 KILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVS--RTEFMTPSAFIFLYE-NQLFL 336 (485)
Q Consensus 260 klWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l--~gh~~~v~avaFspd-g~lla 336 (485)
+|||+++|+++.+|++|...+..|+|++..+..+++++.|++|+|||+++++++..+ ..|...+.+++|+|+ +++||
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEE
Confidence 999999999999999999999999997433357788899999999999999887665 456778999999997 56899
Q ss_pred EEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCC-CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEE
Q 011452 337 TFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYCKADSDDPLAEGNAGSINISNILTGKCLAK 413 (485)
Q Consensus 337 S~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG-~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~t 413 (485)
+++ |++|+|||++ ++++.++.+|... |++|+|+||| ++|||++. |++|+|||+.+|+++.+
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~-----v~~l~~sp~~~~~lasgs~-----------D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAVHSQN-----ITGLAYSYHSSPFLASISE-----------DCTVAVLDADFSEVFRD 307 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECCCSSC-----EEEEEECSSSSCCEEEEET-----------TSCEEEECTTSCEEEEE
T ss_pred EeecccceeEEECCCCcEeEEEecccee-----EEEEEEcCCCCCEEEEEeC-----------CCEEEEEECCCCcEeEE
Confidence 998 9999999996 9999999999987 9999999998 68999987 79999999999999987
Q ss_pred ecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcC-CCCEEEEecCCCcEEEccC
Q 011452 414 IRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDE-DRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 414 l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fsp-Dg~~LaSgs~DgtVklWd~ 485 (485)
+ +|.+ .|++|+|+| |++.|||||.||+|++|++
T Consensus 308 ~-~H~~--------------------------------------~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 308 L-SHRD--------------------------------------FVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp C-CCSS--------------------------------------CEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred C-CCCC--------------------------------------CEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 6 7873 899999999 8999999999999999984
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.2e-48 Score=389.50 Aligned_cols=289 Identities=11% Similarity=0.172 Sum_probs=248.7
Q ss_pred cEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCC
Q 011452 126 QRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNG 205 (485)
Q Consensus 126 ~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG 205 (485)
+...+|.+ |...|++++|+|||+.|||+|. | ++++||+..+++... .+. .+..++..++|+ |+|
T Consensus 55 ~~~~~l~g-H~~~V~~~~~s~d~~~l~s~s~----D------g~v~vWd~~~~~~~~---~~~-~~~~~v~~~~~s-p~g 118 (354)
T 2pbi_B 55 KTRRTLKG-HGNKVLCMDWCKDKRRIVSSSQ----D------GKVIVWDSFTTNKEH---AVT-MPCTWVMACAYA-PSG 118 (354)
T ss_dssp CEEEEEEC-CSSCEEEEEECTTSSEEEEEET----T------SEEEEEETTTCCEEE---EEE-CSSSCCCEEEEC-TTS
T ss_pred EEEEEecC-CCCeEEEEEECCCCCEEEEEeC----C------CeEEEEECCCCCcce---EEe-cCCCCEEEEEEC-CCC
Confidence 45567877 8889999999999999999874 4 599999988887632 222 245677899998 899
Q ss_pred eEEEEeeCCCcEEEeecCCC------e--EEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCC
Q 011452 206 KVLTYSAQDSIYKVFDLKNY------T--MLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL 277 (485)
Q Consensus 206 ~~Las~s~D~tiKlWdl~~g------~--~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~ 277 (485)
++||+++.|+++++|++... . .....|...|.+++|+|++..+++++ .|++|+|||+++|+++.+|.+|.
T Consensus 119 ~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s--~D~~v~lwd~~~~~~~~~~~~h~ 196 (354)
T 2pbi_B 119 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS--GDGTCALWDVESGQLLQSFHGHG 196 (354)
T ss_dssp SEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEECCS
T ss_pred CEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEcCCC
Confidence 99999999999999998643 1 22334667899999998665555544 45899999999999999999999
Q ss_pred cceeEEEEEec-CCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEE
Q 011452 278 HRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 354 (485)
Q Consensus 278 ~~~~~V~f~~~-~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~ 354 (485)
..+..++|.+. ++..|++++.|++|+|||++++++++++.+|...|++++|+|++++|+|++ |++|+|||++ ++.+.
T Consensus 197 ~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 197 ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp SCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 99999999743 356888899999999999999999999999999999999999999999999 9999999996 77888
Q ss_pred EeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCC
Q 011452 355 SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSS 434 (485)
Q Consensus 355 tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~ 434 (485)
.+..+... ..+.+++|+|||++|++++. |++|+|||+.+|+++.++.+|.+
T Consensus 277 ~~~~~~~~---~~~~~~~~s~~g~~l~~g~~-----------d~~i~vwd~~~~~~~~~l~~h~~--------------- 327 (354)
T 2pbi_B 277 IYSKESII---FGASSVDFSLSGRLLFAGYN-----------DYTINVWDVLKGSRVSILFGHEN--------------- 327 (354)
T ss_dssp EECCTTCC---SCEEEEEECTTSSEEEEEET-----------TSCEEEEETTTCSEEEEECCCSS---------------
T ss_pred EEcCCCcc---cceeEEEEeCCCCEEEEEEC-----------CCcEEEEECCCCceEEEEECCCC---------------
Confidence 77755421 23889999999999999987 79999999999999999999983
Q ss_pred CCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 435 GSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
.|++|+|+|||+.|+|||.|++|+||+
T Consensus 328 -----------------------~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 328 -----------------------RVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp -----------------------CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred -----------------------cEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 899999999999999999999999996
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.6e-49 Score=394.60 Aligned_cols=300 Identities=12% Similarity=0.130 Sum_probs=227.4
Q ss_pred eEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEec--cCCcCcccceeeecccc
Q 011452 116 VCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIR--RGKPDAGFALFESESLK 193 (485)
Q Consensus 116 tiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~--~G~~~~~~~lf~~~~~~ 193 (485)
..|.|++..+...+ +...|.+++|||||++|+++| ++ +.+++...+|... ......+......++..
T Consensus 15 ~~r~w~~~~~~~~~-----~~~~v~~~~fs~dG~~l~~~s----d~--~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (344)
T 4gqb_B 15 AAREWNLPPNAPAC-----MERQLEAARYRSDGALLLGAS----SL--SGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEA 83 (344)
T ss_dssp --------CCSCSS-----CCSEEEEEEECTTSCEEEEEE----CC--SSSCCCEEEEEESSGGGTTCGGGCSEEEEESS
T ss_pred cccccCCCCCCccc-----ccCCEEEEEECCCCCEEEEEe----CC--ceEEeeceeeeeccccccCCcceeeeeeccCC
Confidence 45788876554332 566799999999999998876 22 2223332333221 11111111111112223
Q ss_pred CceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE------cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCC
Q 011452 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI------SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDG 267 (485)
Q Consensus 194 ~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl------~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG 267 (485)
.+..|+|+ ||++ |++|+.|++|||||+.+++++.++ |...|.+|+|||++.++++++ .|++|+|||+++|
T Consensus 84 ~v~~~~~s-~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs--~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 84 GVADLTWV-GERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS--KDICIKVWDLAQQ 159 (344)
T ss_dssp CEEEEEEE-TTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTT
T ss_pred CEEEEEEe-CCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe--CCCeEEEEECCCC
Confidence 46789998 6764 678899999999999998754332 346899999999877777755 4589999999999
Q ss_pred eEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecc--cCCCceEEEEEcC-CCcEEEEEe-CCcE
Q 011452 268 TVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR--TEFMTPSAFIFLY-ENQLFLTFR-NRTV 343 (485)
Q Consensus 268 ~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~--gh~~~v~avaFsp-dg~llaS~s-D~TI 343 (485)
+++++|.+|...+..++|++.....+++++.|++|+|||++++++...+. .|...+.+++|+| ++++|++++ |++|
T Consensus 160 ~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 160 VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 99999999999999999974333467788999999999999999988774 4566899999998 567899999 9999
Q ss_pred EEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCC-CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCC
Q 011452 344 AVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLP 421 (485)
Q Consensus 344 klWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG-~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~ 421 (485)
+|||++ ++++.+|++|... |++|+|+||| ++|||+|. |++|+|||+.+|+++ ++.+|.+
T Consensus 240 ~~wd~~~~~~~~~~~~h~~~-----v~~v~fsp~g~~~lasgs~-----------D~~i~vwd~~~~~~~-~~~~H~~-- 300 (344)
T 4gqb_B 240 SLVDTKSTSCVLSSAVHSQC-----VTGLVFSPHSVPFLASLSE-----------DCSLAVLDSSLSELF-RSQAHRD-- 300 (344)
T ss_dssp EEEESCC--CCEEEECCSSC-----EEEEEECSSSSCCEEEEET-----------TSCEEEECTTCCEEE-EECCCSS--
T ss_pred EEEECCCCcEEEEEcCCCCC-----EEEEEEccCCCeEEEEEeC-----------CCeEEEEECCCCcEE-EEcCCCC--
Confidence 999996 9999999999988 9999999998 58999987 799999999999876 5789973
Q ss_pred CCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCC-EEEEecCCCcEEEccC
Q 011452 422 AENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRN-EIYTGNRHGLVHVWSN 485 (485)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~-~LaSgs~DgtVklWd~ 485 (485)
.|++|+|+|||+ .|+|||.|++|++|++
T Consensus 301 ------------------------------------~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 301 ------------------------------------FVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp ------------------------------------CEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred ------------------------------------CEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 899999999997 5789999999999974
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.4e-50 Score=402.49 Aligned_cols=304 Identities=13% Similarity=0.154 Sum_probs=255.8
Q ss_pred CeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccC
Q 011452 115 GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKW 194 (485)
Q Consensus 115 gtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~ 194 (485)
.++..|+..+..+.++|.+ |...|++|+|+|+|+.|||+|. | ++++||++.+++... .+. .+..+
T Consensus 46 ~~~~~~~~~~~~~~~~l~g-H~~~V~~~~~sp~~~~l~s~s~----D------~~v~iWd~~~~~~~~---~~~-~h~~~ 110 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQG-HSGKVYSLDWTPEKNWIVSASQ----D------GRLIVWNALTSQKTH---AIK-LHCPW 110 (380)
T ss_dssp GGCCCCCCCCCEEEEEECC-CSSCEEEEEECTTSSCEEEEET----T------SEEEEEETTTTEEEE---EEE-CCCTT
T ss_pred ccccccccceeEEeecccc-cccEEEEEEEcCCCCEEEEEeC----C------CeEEEEECCCCccce---EEe-cCCCC
Confidence 3455677777888889988 8889999999999999999884 4 599999998887622 233 35567
Q ss_pred ceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe-------EEEEE--cCCcEEEEEEcCC-ceEEEEEcCCCCeeEEEEec
Q 011452 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------MLYSI--SDKNVQEIKISPG-IMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~-------~l~tl--~~~~V~~VafSpg-~~ll~sss~~~D~tIklWdi 264 (485)
+..++|+ |+|++||+++.|++|+|||+.+.. ...++ |...|.+++|+|+ ...+++++ .|++|+|||+
T Consensus 111 v~~~~~s-~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s--~D~~i~~wd~ 187 (380)
T 3iz6_a 111 VMECAFA-PNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS--GDQTCVLWDV 187 (380)
T ss_dssp CCCCEEC-TTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC--TTSCEEEECT
T ss_pred EEEEEEC-CCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC--CCCcEEEEEc
Confidence 7889998 899999999999999999997532 22333 3457999999983 44344433 5689999999
Q ss_pred CCCeEEEEe-----ecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECC-CCeeEEecccCCCceEEEEEcCCCcEEEEE
Q 011452 265 EDGTVLKSF-----NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR-NFELTEVSRTEFMTPSAFIFLYENQLFLTF 338 (485)
Q Consensus 265 ~tG~~L~tl-----~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~-tg~~~~~l~gh~~~v~avaFspdg~llaS~ 338 (485)
++|+++.++ .+|...+..++|.++++..+++++.|++|+|||++ +++++.++.+|...|++++|+|+|++|+|+
T Consensus 188 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 267 (380)
T 3iz6_a 188 TTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTG 267 (380)
T ss_dssp TTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEE
T ss_pred CCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEE
Confidence 999999998 67888899999987778889999999999999998 568899999999999999999999999999
Q ss_pred e-CCcEEEEeCC-CcEEEEeecCCCCC--CCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 339 R-NRTVAVWNFR-GELVTSFEDHLLWH--PDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 339 s-D~TIklWd~~-G~ll~tl~gH~~~~--~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
+ |++|+|||++ |+++.++..|.... ....|.+++|+|+|++|++|+. ||+|+|||+.+++++.++
T Consensus 268 s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-----------dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 268 SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-----------NGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-----------TSCEEEEETTTCCEEEEE
T ss_pred cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-----------CCCEEEEECCCCceEEEE
Confidence 9 9999999996 99999988764321 1123789999999999999986 799999999999999988
Q ss_pred ----cCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 415 ----RASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 415 ----~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.+|.+ .|++|+|+|||+.|||||.|++|+||+.
T Consensus 337 ~~~~~~h~~--------------------------------------~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 337 GTLQNSHEG--------------------------------------RISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp CCSCSSCCC--------------------------------------CCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred ecccCCCCC--------------------------------------ceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 56652 8999999999999999999999999984
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-48 Score=379.40 Aligned_cols=285 Identities=11% Similarity=0.105 Sum_probs=244.3
Q ss_pred EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCe
Q 011452 127 RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGK 206 (485)
Q Consensus 127 ~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~ 206 (485)
..+++.+ |.+.|++|+|+|+|+.|++++. | ++++||++.+|+... .+.. +...+..++|+ |+|+
T Consensus 5 ~~~~~~~-h~~~V~~~~fsp~~~~l~s~~~----d------g~v~lWd~~~~~~~~---~~~~-~~~~v~~~~~~-~~~~ 68 (304)
T 2ynn_A 5 IKKTFSN-RSDRVKGIDFHPTEPWVLTTLY----S------GRVELWNYETQVEVR---SIQV-TETPVRAGKFI-ARKN 68 (304)
T ss_dssp CEEEEEE-ECSCEEEEEECSSSSEEEEEET----T------SEEEEEETTTTEEEE---EEEC-CSSCEEEEEEE-GGGT
T ss_pred eEEeecC-CCCceEEEEECCCCCEEEEEcC----C------CcEEEEECCCCceeE---Eeec-cCCcEEEEEEe-CCCC
Confidence 4557777 8889999999999999999774 4 599999998887522 2322 33456789998 7999
Q ss_pred EEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCC-eEEEEeecCCcceeEE
Q 011452 207 VLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDG-TVLKSFNHLLHRNKKV 283 (485)
Q Consensus 207 ~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG-~~L~tl~~~~~~~~~V 283 (485)
+|++|+.|++|+|||+.+++++.++.+ ..|.+|+|+|++.++++++ .|++|+|||++++ .+.+++.+|.+.+.+|
T Consensus 69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v 146 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (304)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTSCEEEEEGGGTTEEEEEECCCCSCEEEE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEEC--CCCeEEEEECCCCcchhhhhcccCCcEEEE
Confidence 999999999999999999999988864 5799999999777666655 4589999999988 5667899999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeeEEec-ccCCCceEEEEEcC--CCcEEEEEe-CCcEEEEeCC-CcEEEEeec
Q 011452 284 DFIEQFNEKLLVKQENENLQILDVRNFELTEVS-RTEFMTPSAFIFLY--ENQLFLTFR-NRTVAVWNFR-GELVTSFED 358 (485)
Q Consensus 284 ~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l-~gh~~~v~avaFsp--dg~llaS~s-D~TIklWd~~-G~ll~tl~g 358 (485)
+|+|.++..|++++.|++|+|||++++++...+ .+|...+..+.|+| ++++|+|++ |++|+|||++ ++++.+|++
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~ 226 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC
Confidence 998556778999999999999999988765554 46667899999976 889999999 9999999996 999999999
Q ss_pred CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCcc
Q 011452 359 HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCN 438 (485)
Q Consensus 359 H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~ 438 (485)
|... |..++|+|++++|||++. ||+|+|||+.++++++++..|..
T Consensus 227 h~~~-----v~~~~~~p~~~~l~s~s~-----------Dg~i~iWd~~~~~~~~~~~~~~~------------------- 271 (304)
T 2ynn_A 227 HMSN-----VSFAVFHPTLPIIISGSE-----------DGTLKIWNSSTYKVEKTLNVGLE------------------- 271 (304)
T ss_dssp CSSC-----EEEEEECSSSSEEEEEET-----------TSCEEEEETTTCCEEEEECCSSS-------------------
T ss_pred CCCC-----EEEEEECCCCCEEEEEcC-----------CCeEEEEECCCCceeeeccCCCc-------------------
Confidence 9987 999999999999999997 79999999999999999999862
Q ss_pred ccccccccccccchhcccCCeEEEEEcCCCC--EEEEecCCCcEEEcc
Q 011452 439 VKKHSHASRIRSTVAEALEDITALFYDEDRN--EIYTGNRHGLVHVWS 484 (485)
Q Consensus 439 ~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~--~LaSgs~DgtVklWd 484 (485)
.|++++|+|+|. .||+|+.||.+ +|+
T Consensus 272 -------------------~~~~~~~~~~~~~~~~asg~~~g~~-~~~ 299 (304)
T 2ynn_A 272 -------------------RSWCIATHPTGRKNYIASGFDNGFT-VLS 299 (304)
T ss_dssp -------------------SEEEEEECTTCGGGCEEEEETTEEE-EEE
T ss_pred -------------------cEEEEEECCCCCceEEEEecCCceE-EEE
Confidence 899999999986 58999877755 554
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.8e-47 Score=373.26 Aligned_cols=296 Identities=10% Similarity=0.142 Sum_probs=246.4
Q ss_pred cEEEEeecCCcccEEEEEEeeCC-CEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccc--eeeeccccCceEEEEeC
Q 011452 126 QRICFLNVTADEVIRSLFYNKNN-DSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFA--LFESESLKWPGFVEFDD 202 (485)
Q Consensus 126 ~~l~tl~g~~~~~i~sv~~spdg-~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~--lf~~~~~~~~~~V~Fs~ 202 (485)
.+..+|.+ |...|++|+|+|++ ++|+|+|. | +++++|++..+....+.+ .|. +|...+..++|+
T Consensus 8 ~l~~~l~g-H~~~V~~l~~~~~~~~~l~s~s~----D------~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s- 74 (319)
T 3frx_A 8 VLRGTLEG-HNGWVTSLATSAGQPNLLLSASR----D------KTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLT- 74 (319)
T ss_dssp EEEEEECC-CSSCEEEEEECSSCTTEEEEEET----T------SEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEEC-
T ss_pred EEEEEEcc-ccceEEEEEccCCCccEEEEecC----C------ccEEEecCCCCCccccccceEEe-CCcccEEEEEEC-
Confidence 34457877 89999999999975 89999774 4 599999986543321122 222 355667789998
Q ss_pred CCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcce
Q 011452 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRN 280 (485)
Q Consensus 203 pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~ 280 (485)
|+|++|++++.|++|||||+.+++++.++.+ ..|.+|+|+|++.++++++ .|++|+|||++ ++++.++.+|...+
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~vwd~~-~~~~~~~~~h~~~v 151 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGS--RDKTIKVWTIK-GQCLATLLGHNDWV 151 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEE--TTSCEEEEETT-SCEEEEECCCSSCE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEECC-CCeEEEEeccCCcE
Confidence 7999999999999999999999999988864 5899999999777666655 45899999995 78999999999999
Q ss_pred eEEEEEec-----CCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEE
Q 011452 281 KKVDFIEQ-----FNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELV 353 (485)
Q Consensus 281 ~~V~f~~~-----~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll 353 (485)
..+.|.+. ++..+++++.|++|++||++++++...+.+|...|++++|+|+|++|+|++ |++|+|||+. ++++
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 99999742 234788899999999999999999999999999999999999999999999 9999999996 9999
Q ss_pred EEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCC
Q 011452 354 TSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYS 433 (485)
Q Consensus 354 ~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~ 433 (485)
.++..|. . |.+++|+|||.+|++++. +.|++|++.++.++..+..+...
T Consensus 232 ~~~~~~~-~-----v~~~~~sp~~~~la~~~~------------~~i~v~~~~~~~~~~~~~~~~~~------------- 280 (319)
T 3frx_A 232 YTLSAQD-E-----VFSLAFSPNRYWLAAATA------------TGIKVFSLDPQYLVDDLRPEFAG------------- 280 (319)
T ss_dssp EEEECCS-C-----EEEEEECSSSSEEEEEET------------TEEEEEEETTEEEEEEECCCCTT-------------
T ss_pred EEecCCC-c-----EEEEEEcCCCCEEEEEcC------------CCcEEEEeCcCeeeeccCccccc-------------
Confidence 9998764 3 899999999999999874 67999999999999998765410
Q ss_pred CCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 434 SGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.. ..+...|.+|+|||||+.|+||+.|++|+|||+
T Consensus 281 ----~~-------------~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 281 ----YS-------------KAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp ----CC-------------GGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ----cc-------------cCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 00 001137999999999999999999999999984
No 14
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-47 Score=377.30 Aligned_cols=318 Identities=12% Similarity=0.073 Sum_probs=271.7
Q ss_pred cccceEEEEEe--cC-EEEEEeCCCeEEeeec----ccCc------EEEEeec---------CCcccEEEEEEeeCCCEE
Q 011452 94 KRSKIIEIVAA--RD-IVFALAQSGVCAAFCR----ETNQ------RICFLNV---------TADEVIRSLFYNKNNDSL 151 (485)
Q Consensus 94 ~~s~V~~i~~s--~~-~ias~s~dgtiklW~~----~tG~------~l~tl~g---------~~~~~i~sv~~spdg~~L 151 (485)
+..+|..+.|+ ++ +||+++.||++++|++ .+|+ ....+.. +|...|.+++|+|+|+.|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 34455555555 77 9999999999999999 8888 4555533 156689999999999999
Q ss_pred EEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE
Q 011452 152 ITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI 231 (485)
Q Consensus 152 as~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl 231 (485)
|+++. | ++++||+ ..|+... .+. .+...+..++|+ |+|++|++++.|++|++||+.+++++..+
T Consensus 124 ~~~~~----d------g~i~i~~-~~~~~~~---~~~-~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 187 (425)
T 1r5m_A 124 VTGVE----N------GELRLWN-KTGALLN---VLN-FHRAPIVSVKWN-KDGTHIISMDVENVTILWNVISGTVMQHF 187 (425)
T ss_dssp EEEET----T------SCEEEEE-TTSCEEE---EEC-CCCSCEEEEEEC-TTSSEEEEEETTCCEEEEETTTTEEEEEE
T ss_pred EEEeC----C------CeEEEEe-CCCCeee---ecc-CCCccEEEEEEC-CCCCEEEEEecCCeEEEEECCCCcEEEEe
Confidence 99774 3 4899999 6676521 222 244567789998 79999999999999999999999998888
Q ss_pred cC--Cc---------------EEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEE
Q 011452 232 SD--KN---------------VQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLL 294 (485)
Q Consensus 232 ~~--~~---------------V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~ll 294 (485)
.. .. |.+++|+|++.+++++ .|+.|++||+.+++++..+.+|...+..++|+ |++..|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~ 263 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPG---PKGAIFVYQITEKTPTGKLIGHHGPISVLEFN-DTNKLLL 263 (425)
T ss_dssp CCC---------------CCCBSCCEEEETTEEEEEC---GGGCEEEEETTCSSCSEEECCCSSCEEEEEEE-TTTTEEE
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCCEEEEEc---CCCeEEEEEcCCCceeeeeccCCCceEEEEEC-CCCCEEE
Confidence 63 23 8999999988887763 45899999999999999999999999999997 6788999
Q ss_pred EEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEE
Q 011452 295 VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIY 372 (485)
Q Consensus 295 s~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~sva 372 (485)
+++.|++|+|||+++++++..+.+|...|.+++|+|++ +|++++ |++|++||++ ++++..+.+|... |.+++
T Consensus 264 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----i~~~~ 337 (425)
T 1r5m_A 264 SASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-----IFAGR 337 (425)
T ss_dssp EEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-----EEEEE
T ss_pred EEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-----EEEEE
Confidence 99999999999999999999999999999999999999 888998 9999999996 9999999999877 99999
Q ss_pred ECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe--------------------EEEEecCCCCCCCCcccccCCCC
Q 011452 373 ITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK--------------------CLAKIRASNGLPAENECSCSGDY 432 (485)
Q Consensus 373 fSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk--------------------~l~tl~gH~~~~~~~~~~~~~~~ 432 (485)
|+|||++|++++. ||+|+|||+.+++ ++.++.+|..
T Consensus 338 ~s~~~~~l~~~~~-----------dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 393 (425)
T 1r5m_A 338 ISQDGQKYAVAFM-----------DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD------------- 393 (425)
T ss_dssp ECTTSSEEEEEET-----------TSCEEEEECHHHHC--------------CEECCEEEEECCTTC-------------
T ss_pred EcCCCCEEEEEEC-----------CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc-------------
Confidence 9999999999987 7999999999999 9999999862
Q ss_pred CCCCccccccccccccccchhcccC-CeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 433 SSGSCNVKKHSHASRIRSTVAEALE-DITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~l~-~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
. .|++++|+|||+.||+|+.||+|+||++
T Consensus 394 ------------------------~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 394 ------------------------NDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp ------------------------CCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred ------------------------CCceEEEEccCCCceEEEEecCceEEEEee
Confidence 1 7999999999999999999999999985
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.7e-48 Score=392.88 Aligned_cols=279 Identities=9% Similarity=0.133 Sum_probs=249.4
Q ss_pred ccccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEE
Q 011452 93 RKRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (485)
Q Consensus 93 ~~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~ 170 (485)
-|+.+|..+.|+ +.+||+++.||+|++||..+|++++++.+ |...|++|+|+|+|+.||++|. | +++
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs~----D------~~i 174 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCSA----D------MTI 174 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEEEET----T------SCC
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEEEeC----C------CeE
Confidence 378899999999 89999999999999999999999999988 8889999999999999999884 3 589
Q ss_pred EEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEE
Q 011452 171 RIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLL 248 (485)
Q Consensus 171 ~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll 248 (485)
+||++..+++.. .+. +|...+..|+|+ |+|++|++++.|++|++||+.+++++.++.+ ..|..++|+|++.++
T Consensus 175 ~iwd~~~~~~~~---~~~-~h~~~V~~v~~~-p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 175 KLWDFQGFECIR---TMH-GHDHNVSSVSIM-PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp CEEETTSSCEEE---CCC-CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred EEEeCCCCceeE---EEc-CCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 999998777622 222 244567789998 7999999999999999999999999988864 579999999977777
Q ss_pred EEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEec-------------------CCCEEEEEeCCCcEEEEECCC
Q 011452 249 IFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQ-------------------FNEKLLVKQENENLQILDVRN 309 (485)
Q Consensus 249 ~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~-------------------~~~~lls~s~D~tIkIWDv~t 309 (485)
++++. |++|+|||+.+++++.++.+|.+.+..++|++. .+..|++++.|++|+|||+++
T Consensus 250 ~s~s~--D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 250 ASCSN--DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp EEEET--TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred EEEcC--CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 76554 589999999999999999999999999999742 145788899999999999999
Q ss_pred CeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCC
Q 011452 310 FELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAD 387 (485)
Q Consensus 310 g~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~ 387 (485)
++++.++.+|...|.+++|+|+|++|+|++ |++|+|||+. ++++.++.+|... |.+++|+|++.+|||||.
T Consensus 328 ~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~l~sgs~-- 400 (410)
T 1vyh_C 328 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-----VTSLDFHKTAPYVVTGSV-- 400 (410)
T ss_dssp TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSC-----EEEEEECSSSSCEEEEET--
T ss_pred CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc-----EEEEEEcCCCCEEEEEeC--
Confidence 999999999999999999999999999999 9999999996 9999999999987 999999999999999997
Q ss_pred CCCCCCcCCCCeEEEEeC
Q 011452 388 SDDPLAEGNAGSINISNI 405 (485)
Q Consensus 388 ~~d~~~~~~DgtIklWdl 405 (485)
|++|+|||+
T Consensus 401 ---------D~~i~vW~~ 409 (410)
T 1vyh_C 401 ---------DQTVKVWEC 409 (410)
T ss_dssp ---------TSEEEEEC-
T ss_pred ---------CCcEEEEeC
Confidence 799999985
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-47 Score=378.82 Aligned_cols=291 Identities=12% Similarity=0.120 Sum_probs=240.8
Q ss_pred CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC
Q 011452 125 NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN 204 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn 204 (485)
.+++.++.++++..|++|+|||+|+.||++|. | ++++||++..++... ...+..+|...+..|+|+ |+
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~----D------~~i~iw~~~~~~~~~-~~~~~~~h~~~v~~~~~s-p~ 72 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGG----D------RRIRIWGTEGDSWIC-KSVLSEGHQRTVRKVAWS-PC 72 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEET----T------SCEEEEEEETTEEEE-EEEECSSCSSCEEEEEEC-TT
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcC----C------CeEEEEEcCCCccee-eeeeccccCCcEEEEEEC-CC
Confidence 46777888844448999999999999999774 4 599999987765311 111222455667889998 79
Q ss_pred CeEEEEeeCCCcEEEeecCCCe--EEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCC---eEEEEeecCC
Q 011452 205 GKVLTYSAQDSIYKVFDLKNYT--MLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDG---TVLKSFNHLL 277 (485)
Q Consensus 205 G~~Las~s~D~tiKlWdl~~g~--~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG---~~L~tl~~~~ 277 (485)
|++||+++.|++|+|||+.+++ ++.++.+ ..|.+|+|+|++.++++++. |++|+|||+.++ +++..+.+|.
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~h~ 150 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR--DKSVWVWEVDEEDEYECVSVLNSHT 150 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEEECTTSCEEEEEEECCCC
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC--CCeEEEEECCCCCCeEEEEEecCcC
Confidence 9999999999999999998764 6777764 58999999997777766554 589999999877 4678889999
Q ss_pred cceeEEEEEecCCCEEEEEeCCCcEEEEECCCCe--eEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-----
Q 011452 278 HRNKKVDFIEQFNEKLLVKQENENLQILDVRNFE--LTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR----- 349 (485)
Q Consensus 278 ~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~--~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~----- 349 (485)
..+..|+|+ |++..|++++.|++|+|||+++++ +..++.+|...|++++|+|+|++|||++ |++|+|||..
T Consensus 151 ~~v~~~~~~-p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 151 QDVKHVVWH-PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp SCEEEEEEC-SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred CCeEEEEEC-CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 999999997 678899999999999999999885 5678899999999999999999999999 9999999951
Q ss_pred -----------CcEEEEeec-CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe--------
Q 011452 350 -----------GELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK-------- 409 (485)
Q Consensus 350 -----------G~ll~tl~g-H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk-------- 409 (485)
.+++.++.+ |... |++|+|+|++.+||+++. |++|+||++.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~~~-----------d~~i~vw~~~~~~~~~~~~~~ 293 (345)
T 3fm0_A 230 QGVACSGSDPSWKCICTLSGFHSRT-----IYDIAWCQLTGALATACG-----------DDAIRVFQEDPNSDPQQPTFS 293 (345)
T ss_dssp TCCCCC---CEEEEEEEECSSCSSC-----EEEEEECTTTCCEEEEET-----------TSCEEEEEECTTSCTTSCCEE
T ss_pred ccceeeccCCccceeEEecCCCCCc-----EEEEEEecCCCEEEEEeC-----------CCeEEEEEeCCCCCcceeeEE
Confidence 246778877 6655 999999999999999997 7999999987653
Q ss_pred -EEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCC-CEEEEecCCCcEEEcc
Q 011452 410 -CLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDR-NEIYTGNRHGLVHVWS 484 (485)
Q Consensus 410 -~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg-~~LaSgs~DgtVklWd 484 (485)
....+.+|. ..|++|+|+|++ ..|||||.||+|+||+
T Consensus 294 ~~~~~~~~h~--------------------------------------~~V~~v~~~p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 294 LTAHLHQAHS--------------------------------------QDVNCVAWNPKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp EEEEETTSSS--------------------------------------SCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEeeeccccc--------------------------------------CcEeEeEEeCCCceEEEEcCCCCcEEEEE
Confidence 122335665 289999999998 4999999999999997
No 17
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-47 Score=374.15 Aligned_cols=278 Identities=15% Similarity=0.153 Sum_probs=243.8
Q ss_pred ccccceEEEEEe------cCEEEEEeCCCeEEeeecccCcE--EEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcc
Q 011452 93 RKRSKIIEIVAA------RDIVFALAQSGVCAAFCRETNQR--ICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSS 164 (485)
Q Consensus 93 ~~~s~V~~i~~s------~~~ias~s~dgtiklW~~~tG~~--l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~st 164 (485)
-|..+|.+|+|+ +++||+++.|+++|+|+..+++. ..++.+ |...|.+++|+|++..|+++|. |
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~g-h~~~v~~~~~~~~~~~l~s~s~----D--- 101 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEG-HQLGVVSVDISHTLPIAASSSL----D--- 101 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECSSSSEEEEEET----T---
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeecc-CCCCEEEEEECCCCCEEEEEeC----C---
Confidence 366677777775 46899999999999999887764 335666 8889999999999999999774 4
Q ss_pred cceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEc
Q 011452 165 LRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKIS 242 (485)
Q Consensus 165 L~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafS 242 (485)
++++|||+.+|+... .+.. +...+..++|+ |+|++|++++.|++|++||+.+++..+++. ...|.+++|+
T Consensus 102 ---~~i~lWd~~~~~~~~---~~~~-~~~~~~~~~~s-pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~s 173 (321)
T 3ow8_A 102 ---AHIRLWDLENGKQIK---SIDA-GPVDAWTLAFS-PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 173 (321)
T ss_dssp ---SEEEEEETTTTEEEE---EEEC-CTTCCCCEEEC-TTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEEC
T ss_pred ---CcEEEEECCCCCEEE---EEeC-CCccEEEEEEC-CCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEEC
Confidence 599999998887622 2322 23345689998 899999999999999999999999988885 4579999999
Q ss_pred CCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCc
Q 011452 243 PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMT 322 (485)
Q Consensus 243 pg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~ 322 (485)
|++.++++++. |++|+|||+++|+++.++.+|...+.+++|+ |++..|++++.|++|+|||+++++++.++.+|...
T Consensus 174 pdg~~lasg~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~ 250 (321)
T 3ow8_A 174 PDGKYLASGAI--DGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW 250 (321)
T ss_dssp TTSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCCCEEEEC-TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCCCEEEEEcC--CCeEEEEECCCCcEEEEEcccCCceeEEEEc-CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCc
Confidence 97777776554 4899999999999999999999999999997 67888999999999999999999999999999999
Q ss_pred eEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeE
Q 011452 323 PSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSI 400 (485)
Q Consensus 323 v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtI 400 (485)
|.+++|+|++++|+|++ |++|+|||++ ++++.+|.+|... |++|+|+|||++|+|++. |++|
T Consensus 251 v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~-----v~~v~~s~~g~~l~s~~~-----------d~~i 314 (321)
T 3ow8_A 251 VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-----VWGVKYNGNGSKIVSVGD-----------DQEI 314 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-----EEEEEECTTSSEEEEEET-----------TCCE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCc-----EEEEEECCCCCEEEEEeC-----------CCeE
Confidence 99999999999999999 9999999996 9999999999877 999999999999999997 7999
Q ss_pred EEEeC
Q 011452 401 NISNI 405 (485)
Q Consensus 401 klWdl 405 (485)
+|||.
T Consensus 315 ~vwd~ 319 (321)
T 3ow8_A 315 HIYDC 319 (321)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99995
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9e-47 Score=381.63 Aligned_cols=278 Identities=15% Similarity=0.243 Sum_probs=241.3
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-----------------ccccCceE
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-----------------ESLKWPGF 197 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-----------------~~~~~~~~ 197 (485)
|...|.+++|||||++||+++ + ++++||++.+|++.. .+.. ....++..
T Consensus 63 h~~~V~~v~fspdg~~la~g~----~-------~~v~i~~~~~g~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~v~~ 128 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC----N-------KTTQVYRVSDGSLVA---RLSDDSAANKDPENLNTSSSPSSDLYIRS 128 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC----B-------SCEEEEETTTCCEEE---EECC-----------------CCCCBEEE
T ss_pred CCCEEEEEEECCCCCEEEEEc----C-------CcEEEEEecCCCEEE---EecCccccccccccccccccCCCceeEEE
Confidence 888999999999999999854 3 388999998887622 1111 01123668
Q ss_pred EEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeec
Q 011452 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (485)
Q Consensus 198 V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~ 275 (485)
|+|+ |||++||+|+.|++|+|||+.+++++.++.+ ..|.+++|+|++.++++++ .|++|+|||+++|+++.++.+
T Consensus 129 v~~s-~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 129 VCFS-PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS--GDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEEC
T ss_pred EEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec--CCCcEEEEECCCCeeEEEEEc
Confidence 9998 7999999999999999999999999988864 5799999999776666655 458999999999999999874
Q ss_pred CCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEec-------ccCCCceEEEEEcCCCcEEEEEe-CCcEEEEe
Q 011452 276 LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVS-------RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 347 (485)
Q Consensus 276 ~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l-------~gh~~~v~avaFspdg~llaS~s-D~TIklWd 347 (485)
...+..++|++.++..+++++.|++|+|||+++++++..+ .+|...|++++|+|+|++|+|++ |++|+|||
T Consensus 206 -~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 206 -EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp -SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred -CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 4678899998657888999999999999999999988776 68999999999999999999999 99999999
Q ss_pred CC-------------CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 348 FR-------------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 348 ~~-------------G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
++ +.+..++.+|..+ |.+++|+|+|++|+|++. |++|+|||+.+|+++.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~sgs~-----------D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDF-----VLSVATTQNDEYILSGSK-----------DRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp C---------------CEEEEEECCSSC-----EEEEEECGGGCEEEEEET-----------TSEEEEEETTTCCEEEEE
T ss_pred CCCCCCcccccCCCCCcceEEEecccCc-----EEEEEECCCCCEEEEEeC-----------CCeEEEEECCCCeEEEEE
Confidence 84 4567889999988 999999999999999997 799999999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcC------CCCEEEEecCCCcEEEcc
Q 011452 415 RASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDE------DRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 415 ~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fsp------Dg~~LaSgs~DgtVklWd 484 (485)
.+|.+ .|++|+|+| +++.|||||.||+|+||+
T Consensus 349 ~~h~~--------------------------------------~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 349 QGHRN--------------------------------------SVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp ECCSS--------------------------------------CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred CCCCC--------------------------------------CEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 99983 899999986 789999999999999997
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-46 Score=371.12 Aligned_cols=290 Identities=17% Similarity=0.150 Sum_probs=235.7
Q ss_pred cCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeec-cccCceEEEEeC
Q 011452 124 TNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESE-SLKWPGFVEFDD 202 (485)
Q Consensus 124 tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~-~~~~~~~V~Fs~ 202 (485)
+.+++.+|.+ |.+.|++++|+|+ .||++|. | ++++||++..++... ...+... |...+..|+|+
T Consensus 3 ~~~~~~~~~~-h~~~v~~~~~s~~--~las~~~----D------~~i~lw~~~~~~~~~-~~~~~~~~h~~~v~~v~~s- 67 (330)
T 2hes_X 3 SINLIKSLKL-YKEKIWSFDFSQG--ILATGST----D------RKIKLVSVKYDDFTL-IDVLDETAHKKAIRSVAWR- 67 (330)
T ss_dssp CCEEEEEEEC-CSSCEEEEEEETT--EEEEEES----S------SCEEEEECSSSCCEE-EEEECTTCCCSCEEEEEEC-
T ss_pred ccccceeecc-CCCceeeeccCCC--EEEEEcC----C------CEEEEEEecCCCeEE-EEEEecCCccCCEEEEEEC-
Confidence 4567888887 8889999999997 8988774 4 599999997764311 1122122 55567789998
Q ss_pred CCCeEEEEeeCCCcEEEeecC-------CCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecC-C---CeE
Q 011452 203 VNGKVLTYSAQDSIYKVFDLK-------NYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIE-D---GTV 269 (485)
Q Consensus 203 pnG~~Las~s~D~tiKlWdl~-------~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~-t---G~~ 269 (485)
|+|++||+++.|++|||||+. +++++.++.+ ..|.+|+|||++.++++++. |++|+|||+. . .++
T Consensus 68 p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~--D~~v~iwd~~~~~~~~~~ 145 (330)
T 2hes_X 68 PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR--DKSVWIWETDESGEEYEC 145 (330)
T ss_dssp TTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET--TSCEEEEECCTTCCCCEE
T ss_pred CCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC--CCEEEEEeccCCCCCeEE
Confidence 799999999999999999985 3456777754 58999999997777776554 5899999994 2 368
Q ss_pred EEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCC--eeEEecccCCCceEEEEEcCC--CcEEEEEe-CCcEE
Q 011452 270 LKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNF--ELTEVSRTEFMTPSAFIFLYE--NQLFLTFR-NRTVA 344 (485)
Q Consensus 270 L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg--~~~~~l~gh~~~v~avaFspd--g~llaS~s-D~TIk 344 (485)
+.++.+|...+..|+|+ |++..|++++.|++|||||+.++ +++.++.+|...|++++|+|+ +.+|+|++ |++|+
T Consensus 146 ~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~ 224 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWH-PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVR 224 (330)
T ss_dssp EEEECCCSSCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEE
T ss_pred EEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEE
Confidence 89999999999999997 67889999999999999999877 788999999999999999999 78999999 99999
Q ss_pred EEeCC-C--------cEEEEeec-CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe--EEE
Q 011452 345 VWNFR-G--------ELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK--CLA 412 (485)
Q Consensus 345 lWd~~-G--------~ll~tl~g-H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk--~l~ 412 (485)
|||++ + +++.++.+ |..+ |.+|+|+|++ +|||++. ||+|+|||+.+|+ ++.
T Consensus 225 iw~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~s~~~-~l~s~~~-----------dg~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 225 VWKYMGDDEDDQQEWVCEAILPDVHKRQ-----VYNVAWGFNG-LIASVGA-----------DGVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp EEEEEEECTTSCEEEEEEEECCSCCSSC-----EEEEEECTTS-CEEEEET-----------TSCEEEEEEETTEEEEEE
T ss_pred EEEecCCCccccceeEEeeecccccccc-----eEEEEEcCCC-EEEEEeC-----------CCEEEEEEcCCCceEEEe
Confidence 99985 4 56777776 8776 9999999776 7899886 7999999998884 444
Q ss_pred Ee-cCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcC--CCCEEEEecCCCcEEEccC
Q 011452 413 KI-RASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDE--DRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 413 tl-~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fsp--Dg~~LaSgs~DgtVklWd~ 485 (485)
++ .+|.. ..|++|+|+| |++.|||||.||+|+||+.
T Consensus 288 ~~~~~h~~-------------------------------------~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 288 KRALCHGV-------------------------------------YEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp EESCTTTT-------------------------------------SCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred cccccccc-------------------------------------ceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 43 56752 1799999999 7999999999999999984
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.3e-46 Score=368.95 Aligned_cols=278 Identities=11% Similarity=0.150 Sum_probs=239.6
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
|..+|.++.|+ +++||+++.||++++||..+++++.++.. |...|.+++|+|+|+.||+++. | ++++
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~----d------~~v~ 122 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGGL----D------NICS 122 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSSEEEEEET----T------CEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCCEEEEEeC----C------CeEE
Confidence 55666666666 89999999999999999999999999887 8889999999999999999774 4 5999
Q ss_pred EeEeccCCcCcc-cceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEE
Q 011452 172 IEYIRRGKPDAG-FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLL 248 (485)
Q Consensus 172 lw~i~~G~~~~~-~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll 248 (485)
||++..++.... ...+. ++...+..+.|+ ++++ |++++.|++|+|||+.+++++.++.+ ..|.+++|+|++.++
T Consensus 123 iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 199 (340)
T 1got_B 123 IYNLKTREGNVRVSRELA-GHTGYLSCCRFL-DDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp EEETTTCSBSCEEEEEEE-CCSSCEEEEEEE-ETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEECccCCCcceeEEEec-CCCccEEEEEEC-CCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE
Confidence 999876643110 01111 345566788997 5776 78889999999999999999999864 579999999977777
Q ss_pred EEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc--CCCceEEE
Q 011452 249 IFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT--EFMTPSAF 326 (485)
Q Consensus 249 ~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g--h~~~v~av 326 (485)
++++. |++|+|||+.+|+++.++.+|...+..|+|+ |++..|++++.|++|+|||+++++++..+.. +...|.++
T Consensus 200 ~sg~~--d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 200 VSGAC--DASAKLWDVREGMCRQTFTGHESDINAICFF-PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp EEEET--TSCEEEEETTTCSEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEEeC--CCcEEEEECCCCeeEEEEcCCcCCEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEE
Confidence 66554 5899999999999999999999999999997 6788999999999999999999998877653 33479999
Q ss_pred EEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEe
Q 011452 327 IFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISN 404 (485)
Q Consensus 327 aFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWd 404 (485)
+|+|+|++|++++ |++|+|||+. ++++.+|.+|... |.+++|+|||++||||+. |++|+|||
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~s~dg~~l~s~s~-----------D~~i~iWd 340 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-----VSCLGVTDDGMAVATGSW-----------DSFLKIWN 340 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC-----EEEEEECTTSSCEEEEET-----------TSCEEEEC
T ss_pred EECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCc-----EEEEEEcCCCCEEEEEcC-----------CccEEecC
Confidence 9999999999999 9999999995 9999999999988 999999999999999997 79999997
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-46 Score=365.35 Aligned_cols=290 Identities=12% Similarity=0.112 Sum_probs=244.8
Q ss_pred ccccccccccCCCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCC
Q 011452 70 IRLQEEYDTHDPKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNND 149 (485)
Q Consensus 70 ~~l~~~~~~~~~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~ 149 (485)
+.++..|..|..++.++.|.|. +++||+++.||++++||.++++++.++.+ |...|+++.|+|+++
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~-------------~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 68 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPT-------------EPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKN 68 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSS-------------SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT
T ss_pred ceeEEeecCCCCceEEEEECCC-------------CCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCC
Confidence 4455667777666666666666 99999999999999999999999999987 788999999999999
Q ss_pred EEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCC-eEE
Q 011452 150 SLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY-TML 228 (485)
Q Consensus 150 ~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g-~~l 228 (485)
.|+++|. | ++++||++.+|++.. .|. .|...+..|+|+ |++++|++|+.|++|||||+.++ .+.
T Consensus 69 ~l~s~s~----d------~~i~vwd~~~~~~~~---~~~-~h~~~v~~~~~~-~~~~~l~sgs~D~~v~lWd~~~~~~~~ 133 (304)
T 2ynn_A 69 WIIVGSD----D------FRIRVFNYNTGEKVV---DFE-AHPDYIRSIAVH-PTKPYVLSGSDDLTVKLWNWENNWALE 133 (304)
T ss_dssp EEEEEET----T------SEEEEEETTTCCEEE---EEE-CCSSCEEEEEEC-SSSSEEEEEETTSCEEEEEGGGTTEEE
T ss_pred EEEEECC----C------CEEEEEECCCCcEEE---EEe-CCCCcEEEEEEc-CCCCEEEEECCCCeEEEEECCCCcchh
Confidence 9999773 4 599999999988622 233 355667899998 79999999999999999999987 455
Q ss_pred EEEc--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEEee-cCCcceeEEEEEe-cCCCEEEEEeCCCcEE
Q 011452 229 YSIS--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSFN-HLLHRNKKVDFIE-QFNEKLLVKQENENLQ 303 (485)
Q Consensus 229 ~tl~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~tl~-~~~~~~~~V~f~~-~~~~~lls~s~D~tIk 303 (485)
.++. ...|.+++|+| ++.++++++ .|++|+|||+.++++..++. +|...+..++|.+ +++..|++++.|++|+
T Consensus 134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs--~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGC--LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (304)
T ss_dssp EEECCCCSCEEEEEECTTCTTEEEEEE--TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEE
T ss_pred hhhcccCCcEEEEEECCCCCCEEEEEe--CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEE
Confidence 6665 45799999998 555555544 45899999999988877775 5556788899875 3556888899999999
Q ss_pred EEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCC--E
Q 011452 304 ILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD--L 379 (485)
Q Consensus 304 IWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~--~ 379 (485)
|||+++++++.++.+|...|.+++|+|++++|+|++ |++|+|||++ ++++++|..|... ++.++|+|+|. +
T Consensus 212 iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 286 (304)
T 2ynn_A 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-----SWCIATHPTGRKNY 286 (304)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSS-----EEEEEECTTCGGGC
T ss_pred EEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCcc-----EEEEEECCCCCceE
Confidence 999999999999999999999999999999999999 9999999996 9999999999877 99999999985 6
Q ss_pred EEEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 380 IISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 380 LaS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
||+|+. +.+.+|++..
T Consensus 287 ~asg~~------------~g~~~~~~~~ 302 (304)
T 2ynn_A 287 IASGFD------------NGFTVLSLGN 302 (304)
T ss_dssp EEEEET------------TEEEEEECC-
T ss_pred EEEecC------------CceEEEEecc
Confidence 888874 6688998764
No 22
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-45 Score=356.84 Aligned_cols=291 Identities=14% Similarity=0.171 Sum_probs=249.4
Q ss_pred CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC
Q 011452 125 NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN 204 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn 204 (485)
.++..++.+ |...|++++|+|+|+.||+++. | ++++||++.+|++.. .+. .+...+..++|+ |+
T Consensus 13 ~~~~~~~~g-h~~~v~~~~~s~~~~~l~s~~~----d------g~i~iw~~~~~~~~~---~~~-~h~~~v~~~~~~-~~ 76 (312)
T 4ery_A 13 YALKFTLAG-HTKAVSSVKFSPNGEWLASSSA----D------KLIKIWGAYDGKFEK---TIS-GHKLGISDVAWS-SD 76 (312)
T ss_dssp CEEEEEECC-CSSCEEEEEECTTSSEEEEEET----T------SCEEEEETTTCCEEE---EEC-CCSSCEEEEEEC-TT
T ss_pred ceeEEEEcc-cCCcEEEEEECCCCCEEEEeeC----C------CeEEEEeCCCcccch---hhc-cCCCceEEEEEc-CC
Confidence 344556766 8889999999999999999774 3 589999998887632 233 244556789998 79
Q ss_pred CeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeE
Q 011452 205 GKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKK 282 (485)
Q Consensus 205 G~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~ 282 (485)
|++|++++.|++|+|||+.+++++.++.+ ..|.+++|+|++.++++++. |++|++||++++++++++..|...+..
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVKTGKCLKTLPAHSDPVSA 154 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET--TSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCEEEEEecCCCCcEEE
Confidence 99999999999999999999999988864 57999999997766666543 489999999999999999999999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeeEEec-ccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecC
Q 011452 283 VDFIEQFNEKLLVKQENENLQILDVRNFELTEVS-RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDH 359 (485)
Q Consensus 283 V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l-~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH 359 (485)
++|+ |++..+++++.|++|+|||+++++++..+ ..|...+..++|+|++++|++++ |++|+|||++ ++++.++.+|
T Consensus 155 ~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 233 (312)
T 4ery_A 155 VHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 233 (312)
T ss_dssp EEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSS
T ss_pred EEEc-CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEec
Confidence 9996 67889999999999999999999988775 45667899999999999999999 9999999996 9999999999
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccc
Q 011452 360 LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNV 439 (485)
Q Consensus 360 ~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~ 439 (485)
...... +......+++++|++++. ||+|+|||+.++++++++.+|.+
T Consensus 234 ~~~~~~--~~~~~~~~~~~~l~sg~~-----------dg~i~vwd~~~~~~~~~~~~h~~-------------------- 280 (312)
T 4ery_A 234 KNEKYC--IFANFSVTGGKWIVSGSE-----------DNLVYIWNLQTKEIVQKLQGHTD-------------------- 280 (312)
T ss_dssp CCSSSC--CCEEEECSSSCEEEECCT-----------TSCEEEEETTTCCEEEEECCCSS--------------------
T ss_pred CCceEE--EEEEEEeCCCcEEEEECC-----------CCEEEEEECCCchhhhhhhccCC--------------------
Confidence 764211 334455688999999986 79999999999999999999973
Q ss_pred cccccccccccchhcccCCeEEEEEcCCCCEEEEec--CCCcEEEccC
Q 011452 440 KKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGN--RHGLVHVWSN 485 (485)
Q Consensus 440 ~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs--~DgtVklWd~ 485 (485)
.|.+++|+|+++.|+|++ .|++|+||+.
T Consensus 281 ------------------~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 281 ------------------VVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp ------------------CEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred ------------------cEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 899999999999999997 6999999973
No 23
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-48 Score=382.70 Aligned_cols=342 Identities=12% Similarity=0.085 Sum_probs=260.0
Q ss_pred eEEEEEe--cC-EEEEE----------eCCCeEEeeecccCc---EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCC
Q 011452 98 IIEIVAA--RD-IVFAL----------AQSGVCAAFCRETNQ---RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDN 161 (485)
Q Consensus 98 V~~i~~s--~~-~ias~----------s~dgtiklW~~~tG~---~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d 161 (485)
|..++|+ ++ +||++ +.|+++++|+..+++ ++.++ .|...|.+++|+|+|++||+++. |
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~----d 88 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL--QVDSKFNDLDWSHNNKIIAGALD----N 88 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC--CCSSCEEEEEECSSSSCEEEEES----S
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE--ecCCceEEEEECCCCCeEEEEcc----C
Confidence 3334444 65 88998 899999999999886 44444 37788999999999999999774 3
Q ss_pred CcccceeEEEEeEeccCCcCc-ccceeeeccccCceEEEEeCCC-CeEEEEeeCCCcEEEeecCCCe------EEEEE--
Q 011452 162 FSSLRCRSTRIEYIRRGKPDA-GFALFESESLKWPGFVEFDDVN-GKVLTYSAQDSIYKVFDLKNYT------MLYSI-- 231 (485)
Q Consensus 162 ~stL~~~t~~lw~i~~G~~~~-~~~lf~~~~~~~~~~V~Fs~pn-G~~Las~s~D~tiKlWdl~~g~------~l~tl-- 231 (485)
++++||++....... -...+. .+...+..++|+ |+ +++|++++.|++|+|||+.+++ ....+
T Consensus 89 ------g~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 89 ------GSLELYSTNEANNAINSMARFS-NHSSSVKTVKFN-AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp ------SCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEEC-SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred ------CeEEEeecccccccccchhhcc-CCccceEEEEEc-CCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc
Confidence 589999986621100 011122 345567799998 66 8999999999999999999887 44433
Q ss_pred ---cCCcEEEEEEcCC-ceEEEEEcCCCCeeEEEEecCCCeEEEEeecC------CcceeEEEEEecCC-CEEEEEeCCC
Q 011452 232 ---SDKNVQEIKISPG-IMLLIFTKASGHVPLKILSIEDGTVLKSFNHL------LHRNKKVDFIEQFN-EKLLVKQENE 300 (485)
Q Consensus 232 ---~~~~V~~VafSpg-~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~------~~~~~~V~f~~~~~-~~lls~s~D~ 300 (485)
+...|.+++|+|+ +.++++++ .|++|+|||+++++++.++..| ...+..++|+ |++ ..+++++.|+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAG--SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH-PKNSTRVATATGSD 237 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEES--SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC-SSCTTEEEEEECCS
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEc--CCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC-CCCCCEEEEEECCC
Confidence 3468999999986 56666544 4589999999999999999876 6778999997 555 5777788998
Q ss_pred ---cEEEEECCCC-eeEEecc-cCCCceEEEEEcC-CCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEE
Q 011452 301 ---NLQILDVRNF-ELTEVSR-TEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIY 372 (485)
Q Consensus 301 ---tIkIWDv~tg-~~~~~l~-gh~~~v~avaFsp-dg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~sva 372 (485)
+|+|||++++ +++..+. +|...|.+++|+| ++++|++++ |++|+|||++ ++++.++.+|..+ |.+++
T Consensus 238 ~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-----v~~~~ 312 (416)
T 2pm9_A 238 NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW-----CFKTK 312 (416)
T ss_dssp SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC-----CCCEE
T ss_pred CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc-----eEEEE
Confidence 9999999997 6788888 9999999999999 999999999 9999999996 9999999999987 99999
Q ss_pred ECCCC-CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC---C-CCC-Cc-----ccccCCCCCCCCccccc
Q 011452 373 ITSDQ-DLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN---G-LPA-EN-----ECSCSGDYSSGSCNVKK 441 (485)
Q Consensus 373 fSpDG-~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~---~-~~~-~~-----~~~~~~~~~~~~~~~~~ 441 (485)
|+||| ++|++++. |++|+|||+.+++......... + .+. ++ ++..+... ...
T Consensus 313 ~s~~~~~~l~s~~~-----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----- 375 (416)
T 2pm9_A 313 FAPEAPDLFACASF-----------DNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPS-VFH----- 375 (416)
T ss_dssp ECTTCTTEEEECCS-----------SSEEEEEESCCCCCSSCC----------------------CCSCCC-SSC-----
T ss_pred ECCCCCCEEEEEec-----------CCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccc-ccc-----
Confidence 99999 89999986 7999999999887654332200 0 000 00 00000000 000
Q ss_pred cccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 442 HSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 442 ~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
+ .........|++++|+|||+.||+|+.|++|+||+.
T Consensus 376 ------~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 376 ------L-QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp ------C-CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred ------c-cCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 0 001112247889999999999999999999999984
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.7e-45 Score=350.09 Aligned_cols=320 Identities=10% Similarity=0.040 Sum_probs=266.6
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
+..+|..++|+ |+++|++..++.+..|............+ |.+.|.+++|+|+|+.|++++ | ++++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~-----d------g~i~ 75 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLN-HGEVVCAVTISNPTRHVYTGG-----K------GCVK 75 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEEC-CSSCCCEEEECSSSSEEEEEC-----B------SEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceecc-CCCceEEEEEecCCcEEEEcC-----C------CeEE
Confidence 45667778887 99999888888777777655444443444 888999999999999998855 2 4999
Q ss_pred EeEeccCCcCcccceeee-ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcCCce
Q 011452 172 IEYIRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKNVQEIKISPGIM 246 (485)
Q Consensus 172 lw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~--~l~tl~--~~~V~~VafSpg~~ 246 (485)
||++..++.......+.. .+...+..++|+ |+|++|++++.|++|++||+.+++ ....+. ...|.+++|+|++.
T Consensus 76 iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 154 (337)
T 1gxr_A 76 VWDISHPGNKSPVSQLDCLNRDNYIRSCKLL-PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK 154 (337)
T ss_dssp EEETTSTTCCSCSEEEECSCTTSBEEEEEEC-TTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS
T ss_pred EEECCCCCceeeeecccccCCCCcEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC
Confidence 999987765332222221 234556789998 799999999999999999999887 555554 45799999999776
Q ss_pred EEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEE
Q 011452 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAF 326 (485)
Q Consensus 247 ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~av 326 (485)
++++++. |++|++||+++++++.++.+|...+..++|+ |++..|++++.|++|++||+++++++..+ .|...+.++
T Consensus 155 ~l~~~~~--dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~ 230 (337)
T 1gxr_A 155 VCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-NDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSL 230 (337)
T ss_dssp EEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEE
T ss_pred EEEEEeC--CCcEEEEeCCCCceeeeeecccCceEEEEEC-CCCCEEEEEecCCcEEEEECCCCceEeee-cCCCceEEE
Confidence 6665543 4899999999999999999999999999997 67889999999999999999999998887 477789999
Q ss_pred EEcCCCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeC
Q 011452 327 IFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNI 405 (485)
Q Consensus 327 aFspdg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl 405 (485)
+|+|++++|++++ |++|++||++...+..+.+|... |.+++|+|||++|++++. ||+|++||+
T Consensus 231 ~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~-----------dg~i~~~~~ 294 (337)
T 1gxr_A 231 GYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESC-----VLSLKFAYCGKWFVSTGK-----------DNLLNAWRT 294 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSC-----EEEEEECTTSSEEEEEET-----------TSEEEEEET
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccc-----eeEEEECCCCCEEEEecC-----------CCcEEEEEC
Confidence 9999999999999 99999999974445678888877 999999999999999987 799999999
Q ss_pred CCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 406 LTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 406 ~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.+++++..+ .|. ..|++++|+||++.|++|+.||+|++|++
T Consensus 295 ~~~~~~~~~-~~~--------------------------------------~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 295 PYGASIFQS-KES--------------------------------------SSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTCCEEEEE-ECS--------------------------------------SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEe-cCC--------------------------------------CcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999998655 454 28999999999999999999999999984
No 25
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.2e-45 Score=379.64 Aligned_cols=317 Identities=11% Similarity=0.129 Sum_probs=269.8
Q ss_pred cccceEEEEEe--cC-EEEEEeCCCeEEeeecccCcEEEEeecCCcc---cEEEEEEeeC-CCEEEEEEeecCCCCcccc
Q 011452 94 KRSKIIEIVAA--RD-IVFALAQSGVCAAFCRETNQRICFLNVTADE---VIRSLFYNKN-NDSLITVSVYASDNFSSLR 166 (485)
Q Consensus 94 ~~s~V~~i~~s--~~-~ias~s~dgtiklW~~~tG~~l~tl~g~~~~---~i~sv~~spd-g~~Las~S~d~~~d~stL~ 166 (485)
+...|..+.|+ ++ +|++++.||++++||..+++++.++.+ |.. .|.+++|+|+ |+.|++++. |
T Consensus 159 ~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~----d----- 228 (615)
T 1pgu_A 159 HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT-HHKQGSFVRDVEFSPDSGEFVITVGS----D----- 228 (615)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS-SSCTTCCEEEEEECSTTCCEEEEEET----T-----
T ss_pred CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc-cCCCCceEEEEEECCCCCCEEEEEeC----C-----
Confidence 56778999999 44 899999999999999999999999987 777 8999999999 999999774 3
Q ss_pred eeEEEEeEeccCCcCcccceeee---ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC------CcEE
Q 011452 167 CRSTRIEYIRRGKPDAGFALFES---ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD------KNVQ 237 (485)
Q Consensus 167 ~~t~~lw~i~~G~~~~~~~lf~~---~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~------~~V~ 237 (485)
+++++|++.+|++.. .+.. .+...+..++|+ +|++|++++.|++|++||+.+++++.++.. ..+.
T Consensus 229 -g~i~vwd~~~~~~~~---~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 229 -RKISCFDGKSGEFLK---YIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp -CCEEEEETTTCCEEE---ECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred -CeEEEEECCCCCEeE---EecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence 589999999888732 3311 344567789996 899999999999999999999999888853 4688
Q ss_pred EEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEec-----------------------------
Q 011452 238 EIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQ----------------------------- 288 (485)
Q Consensus 238 ~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~----------------------------- 288 (485)
.+.|+++..+++++ .|++|++||+.+++++.++.+|...+..++| +.
T Consensus 303 ~~~~~~~~~l~~~~---~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~ 378 (615)
T 1pgu_A 303 GVVATGNGRIISLS---LDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSL 378 (615)
T ss_dssp EEEEEETTEEEEEE---TTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEE
T ss_pred EEEeCCCCeEEEEE---CCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEE
Confidence 99998777776653 3489999999999999999887666655554 10
Q ss_pred ---C-------------------------------------------------------------------------CCE
Q 011452 289 ---F-------------------------------------------------------------------------NEK 292 (485)
Q Consensus 289 ---~-------------------------------------------------------------------------~~~ 292 (485)
+ +..
T Consensus 379 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (615)
T 1pgu_A 379 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNY 458 (615)
T ss_dssp ECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSE
T ss_pred EECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCE
Confidence 0 334
Q ss_pred EEEEeC-CCcEEEEECCCCeeE-EecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeec-CCCCCCCCC
Q 011452 293 LLVKQE-NENLQILDVRNFELT-EVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFED-HLLWHPDCN 367 (485)
Q Consensus 293 lls~s~-D~tIkIWDv~tg~~~-~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~g-H~~~~~~~~ 367 (485)
+++++. |++|++||+.++++. ..+.+|...|.+++|+|||++|++++ |++|+|||++ ++++.++.+ |...
T Consensus 459 l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~----- 533 (615)
T 1pgu_A 459 VAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSK----- 533 (615)
T ss_dssp EEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSC-----
T ss_pred EEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCc-----
Confidence 455555 788888888877665 67788999999999999999999999 9999999995 999999998 9877
Q ss_pred eeEEEECC----------CCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCC-eEEEEecCCCCCCCCcccccCCCCCCCC
Q 011452 368 TNNIYITS----------DQDLIISYCKADSDDPLAEGNAGSINISNILTG-KCLAKIRASNGLPAENECSCSGDYSSGS 436 (485)
Q Consensus 368 v~svafSp----------DG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TG-k~l~tl~gH~~~~~~~~~~~~~~~~~~~ 436 (485)
|++++|+| ||++||+++. ||+|+|||+.++ +++.++.+|..
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~-----------dg~i~iw~~~~~~~~~~~~~~h~~----------------- 585 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVATGSL-----------DTNIFIYSVKRPMKIIKALNAHKD----------------- 585 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEEEET-----------TSCEEEEESSCTTCCEEETTSSTT-----------------
T ss_pred eeEEEEcCccccccccccCCCEEEEEcC-----------CCcEEEEECCCCceechhhhcCcc-----------------
Confidence 99999999 9999999997 799999999998 89999999973
Q ss_pred ccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 437 CNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.|++|+|+|||+ |+||+.||+|+||++
T Consensus 586 ---------------------~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 586 ---------------------GVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp ---------------------CEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred ---------------------ceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 899999999999 999999999999984
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.8e-45 Score=366.99 Aligned_cols=279 Identities=11% Similarity=0.142 Sum_probs=237.3
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
|..+|.++.|+ +++||+++.||++++||..+++...++.. |...|.+++|+|+|+.||+++. | ++++
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~~v~~~~~sp~g~~lasg~~----d------~~i~ 131 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCTWVMACAYAPSGCAIACGGL----D------NKCS 131 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCEEEECTTSSEEEEEST----T------SEEE
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-CCCCEEEEEECCCCCEEEEeeC----C------CCEE
Confidence 44455555555 89999999999999999999999998887 7778999999999999998663 4 5899
Q ss_pred EeEeccCCcCcc---cceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC--C
Q 011452 172 IEYIRRGKPDAG---FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISP--G 244 (485)
Q Consensus 172 lw~i~~G~~~~~---~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSp--g 244 (485)
+|++..++.... ...+. .|...+..++|+ |+++.|++++.|++|||||+.+++++.++.+ ..|.+++|+| +
T Consensus 132 v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVA-MHTNYLSACSFT-NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET 209 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEE-ECSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSS
T ss_pred EEEEeccccccccccceeee-ccCCcEEEEEEe-CCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCC
Confidence 999865432110 11122 355667789997 7999999999999999999999999988864 5799999986 3
Q ss_pred ceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccC--CCc
Q 011452 245 IMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTE--FMT 322 (485)
Q Consensus 245 ~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh--~~~ 322 (485)
+.++++++ .|++|++||+.+|++++++.+|...+.+|+|+ |++..|++++.|++|+|||+++++++..+..+ ...
T Consensus 210 g~~l~sgs--~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 210 GNTFVSGG--CDKKAMVWDMRSGQCVQAFETHESDVNSVRYY-PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFG 286 (354)
T ss_dssp CCEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred CCEEEEEe--CCCeEEEEECCCCcEEEEecCCCCCeEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccc
Confidence 44555544 45899999999999999999999999999997 67889999999999999999999888777544 347
Q ss_pred eEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeE
Q 011452 323 PSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSI 400 (485)
Q Consensus 323 v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtI 400 (485)
+.+++|+|+|++|++++ |++|+|||+. |+++.++.+|..+ |.+++|+|||++||||+. |++|
T Consensus 287 ~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~-----v~~l~~spdg~~l~sgs~-----------D~~v 350 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENR-----VSTLRVSPDGTAFCSGSW-----------DHTL 350 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC-----EEEEEECTTSSCEEEEET-----------TSEE
T ss_pred eeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCc-----EEEEEECCCCCEEEEEcC-----------CCCE
Confidence 89999999999999999 9999999995 9999999999988 999999999999999997 7999
Q ss_pred EEEe
Q 011452 401 NISN 404 (485)
Q Consensus 401 klWd 404 (485)
+||+
T Consensus 351 ~vW~ 354 (354)
T 2pbi_B 351 RVWA 354 (354)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9996
No 27
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.3e-44 Score=348.41 Aligned_cols=305 Identities=11% Similarity=0.123 Sum_probs=244.6
Q ss_pred eecccCcEEEEeecCCcccEEEEEEeeC-CCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceE
Q 011452 120 FCRETNQRICFLNVTADEVIRSLFYNKN-NDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGF 197 (485)
Q Consensus 120 W~~~tG~~l~tl~g~~~~~i~sv~~spd-g~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~ 197 (485)
+..++.++..||.| |.+.|++|+|+|+ +++|||+|. | ++++||++..++...+.++... +|...+..
T Consensus 23 ~~~~~~~l~~tL~G-H~~~V~~v~~sp~~~~~l~S~s~----D------~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~ 91 (340)
T 4aow_A 23 MMTEQMTLRGTLKG-HNGWVTQIATTPQFPDMILSASR----D------KTIIMWKLTRDETNYGIPQRALRGHSHFVSD 91 (340)
T ss_dssp ---CEEEEEEEECC-CSSCEEEEEECTTCTTEEEEEET----T------SCEEEEEECCSSSCSEEEEEEECCCSSCEEE
T ss_pred ccCCceEEEEEECC-ccCCEEEEEEeCCCCCEEEEEcC----C------CeEEEEECCCCCcccceeeEEEeCCCCCEEE
Confidence 34455667778987 8999999999998 689999874 4 5999999988776443332221 34566778
Q ss_pred EEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEE-EEee
Q 011452 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVL-KSFN 274 (485)
Q Consensus 198 V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L-~tl~ 274 (485)
++|+ |||++|++++.|++|++|+...+....... ...+..+.++|.+.++++++ .|+.+++||+...... ..+.
T Consensus 92 ~~~s-~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s--~d~~~~~~d~~~~~~~~~~~~ 168 (340)
T 4aow_A 92 VVIS-SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS--RDKTIKLWNTLGVCKYTVQDE 168 (340)
T ss_dssp EEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECSS
T ss_pred EEEC-CCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeec--CCCeEEEEEeCCCceEEEEec
Confidence 9998 799999999999999999999988766654 46788999998555555544 4589999999776554 3456
Q ss_pred cCCcceeEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-Cc
Q 011452 275 HLLHRNKKVDFIEQFN-EKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE 351 (485)
Q Consensus 275 ~~~~~~~~V~f~~~~~-~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ 351 (485)
+|...+..++|.+... ..+++++.|++|++||+++++++..+.+|...|.+++|+|+|++|+|++ |++|+|||++ ++
T Consensus 169 ~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 169 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 7888899999974333 3456678999999999999999999999999999999999999999999 9999999996 99
Q ss_pred EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCC
Q 011452 352 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGD 431 (485)
Q Consensus 352 ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~ 431 (485)
++..+.+|. . |..++|+|++.+|+++. |++|+|||+.+++++.++..+...
T Consensus 249 ~~~~~~~~~-~-----v~~~~~~~~~~~~~~~~------------d~~i~iwd~~~~~~~~~~~~~~~~----------- 299 (340)
T 4aow_A 249 HLYTLDGGD-I-----INALCFSPNRYWLCAAT------------GPSIKIWDLEGKIIVDELKQEVIS----------- 299 (340)
T ss_dssp EEEEEECSS-C-----EEEEEECSSSSEEEEEE------------TTEEEEEETTTTEEEEEECCC--------------
T ss_pred eeeeecCCc-e-----EEeeecCCCCceeeccC------------CCEEEEEECCCCeEEEecccccee-----------
Confidence 999998774 3 89999999998877654 699999999999999999765410
Q ss_pred CCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 432 YSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.....+...|++|+|+|||+.||||+.||+|+|||+
T Consensus 300 ------------------~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 300 ------------------TSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp ----------------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ------------------eeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 000001138999999999999999999999999984
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4e-45 Score=361.79 Aligned_cols=299 Identities=13% Similarity=0.142 Sum_probs=234.4
Q ss_pred CcEEEEeecCCcccEEEEEE-----ee-CCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCc--ccceee-eccccCc
Q 011452 125 NQRICFLNVTADEVIRSLFY-----NK-NNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDA--GFALFE-SESLKWP 195 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~-----sp-dg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~--~~~lf~-~~~~~~~ 195 (485)
.+++.+|.+ |...|++|+| +| ||+.|||+|. | ++++||++..++... +.++.. .+|...+
T Consensus 11 ~~~~~~l~g-H~~~V~~~~~~~s~~~~~d~~~l~sgs~----D------~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V 79 (343)
T 2xzm_R 11 VVKRGILEG-HSDWVTSIVAGFSQKENEDSPVLISGSR----D------KTVMIWKLYEEEQNGYFGIPHKALTGHNHFV 79 (343)
T ss_dssp EEEEEEEEC-CSSCEEEEEECCCSSTTCCCCEEEEEET----T------SCEEEEEECSSCCSSBSEEEEEEECCCSSCE
T ss_pred eeeeeeecc-chhhhhheeeEEEeecCCCCCEEEEEcC----C------CEEEEEECCcCCcccccccccchhccCCCce
Confidence 456677887 8889999999 77 9999999874 4 599999997654321 111111 1355567
Q ss_pred eEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEe
Q 011452 196 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSF 273 (485)
Q Consensus 196 ~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl 273 (485)
..|+|+ |+|++|++++.|++|||||+.+++++.++. ...|.+|+|||++.++++++ .|++|+|||+. +++...+
T Consensus 80 ~~~~~~-~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~--~d~~i~~wd~~-~~~~~~~ 155 (343)
T 2xzm_R 80 SDLALS-QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG--AEREIKLWNIL-GECKFSS 155 (343)
T ss_dssp EEEEEC-SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE--TTSCEEEEESS-SCEEEEC
T ss_pred EEEEEC-CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc--CCCEEEEEecc-CCceeee
Confidence 789998 799999999999999999999999998885 45899999999776666654 45899999997 5565555
Q ss_pred e---cCCcceeEEEEEecCC----------CEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-
Q 011452 274 N---HLLHRNKKVDFIEQFN----------EKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR- 339 (485)
Q Consensus 274 ~---~~~~~~~~V~f~~~~~----------~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s- 339 (485)
. +|...+..++|++ ++ ..+++++.|++|+||| .++++..++.+|...|.+++|+|||++|||++
T Consensus 156 ~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 156 AEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGK 233 (343)
T ss_dssp CTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcC
Confidence 4 6778899999974 43 5788899999999999 45788888999999999999999999999999
Q ss_pred CCcEEEEeC-C-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEE--Eec
Q 011452 340 NRTVAVWNF-R-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLA--KIR 415 (485)
Q Consensus 340 D~TIklWd~-~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~--tl~ 415 (485)
|++|+|||+ + +.+...+. |... |++|+|+|++++|++++ |++|+|||+.+++++. ++.
T Consensus 234 dg~v~iwd~~~~~~~~~~~~-~~~~-----v~~v~~sp~~~~la~~~------------d~~v~iw~~~~~~~~~~~~~~ 295 (343)
T 2xzm_R 234 DKKLLIWDILNLTYPQREFD-AGST-----INQIAFNPKLQWVAVGT------------DQGVKIFNLMTQSKAPVCTIE 295 (343)
T ss_dssp TCEEEEEESSCCSSCSEEEE-CSSC-----EEEEEECSSSCEEEEEE------------SSCEEEEESSSCCSCSEEECC
T ss_pred CCeEEEEECCCCcccceeec-CCCc-----EEEEEECCCCCEEEEEC------------CCCEEEEEeCCCCCCceEEee
Confidence 999999999 4 55566663 3223 89999999999998765 5899999999987655 555
Q ss_pred CCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 416 ASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 416 gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.+.. .. .. ... .+...|++|+|+|||+.||+|+.||+|+||+.
T Consensus 296 ~~~~----~~---~~---------~~~-----------~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 296 AEPI----TK---AE---------GQK-----------GKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp CCSG----GG---BT---------TBC-----------CSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred cCcc----hh---hh---------hhc-----------CCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 3210 00 00 000 00137999999999999999999999999983
No 29
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.1e-45 Score=369.90 Aligned_cols=283 Identities=11% Similarity=0.073 Sum_probs=224.2
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeeccc------------CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecC
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRET------------NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYAS 159 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~t------------G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~ 159 (485)
+...|.++.|+ |++|++++ |+++|+||... +.+...+ .++..|.+|+|+||+ .|+++|
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~d~-~l~~~s---- 100 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGV--QTEAGVADLTWVGER-GILVAS---- 100 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEE--EESSCEEEEEEETTT-EEEEEE----
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeee--ccCCCEEEEEEeCCC-eEEEEE----
Confidence 34568888888 89999888 88999997321 1111111 245679999999996 577766
Q ss_pred CCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEE
Q 011452 160 DNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQ 237 (485)
Q Consensus 160 ~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~ 237 (485)
+| ++|+|||+.+|+..........+|...+..|+|+ |||++|++|+.|++|||||+.+++++.++.+ ..|.
T Consensus 101 ~d------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s-pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 101 DS------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVL-SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp TT------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CC------CEEEEEeccCCCceeEeeccccCCCCCEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 34 5999999999987432222222456678899998 7999999999999999999999999999964 5899
Q ss_pred EEEEcCCc-eEEEEEcCCCCeeEEEEecCCCeEEEEee--cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE
Q 011452 238 EIKISPGI-MLLIFTKASGHVPLKILSIEDGTVLKSFN--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE 314 (485)
Q Consensus 238 ~VafSpg~-~ll~sss~~~D~tIklWdi~tG~~L~tl~--~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~ 314 (485)
+++|+|++ .++++++ .|++|+|||+++|+++.++. .|.+.+.+++|++.++..+++++.|++|+|||+++++++.
T Consensus 174 ~~~~~~~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~ 251 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCS--EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVL 251 (344)
T ss_dssp EEEECSSCTTEEEEEE--TTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCE
T ss_pred EEEecCCCCCceeeec--cccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEE
Confidence 99999744 4555544 45899999999999999886 3445678999985555667778999999999999999999
Q ss_pred ecccCCCceEEEEEcCCC-cEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCC-EEEEEecCCCCC
Q 011452 315 VSRTEFMTPSAFIFLYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDD 390 (485)
Q Consensus 315 ~l~gh~~~v~avaFspdg-~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~-~LaS~s~d~~~d 390 (485)
++.+|...|++++|+|+| ++|||++ |++|+|||++ |+++ .+.+|... |++|+|+|||+ +|+|++.
T Consensus 252 ~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~-----V~~v~~sp~~~~llas~s~----- 320 (344)
T 4gqb_B 252 SSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDF-----VRDATWSPLNHSLLTTVGW----- 320 (344)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSC-----EEEEEECSSSTTEEEEEET-----
T ss_pred EEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCC-----EEEEEEeCCCCeEEEEEcC-----
Confidence 999999999999999998 5799999 9999999997 6655 67899988 99999999986 5778886
Q ss_pred CCCcCCCCeEEEEeCCCCeE
Q 011452 391 PLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 391 ~~~~~~DgtIklWdl~TGk~ 410 (485)
|++|++|++.+...
T Consensus 321 ------D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 321 ------DHQVVHHVVPTEPL 334 (344)
T ss_dssp ------TSCEEEEECCC---
T ss_pred ------CCeEEEEECCCCCC
Confidence 79999999987654
No 30
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-46 Score=418.39 Aligned_cols=322 Identities=12% Similarity=0.082 Sum_probs=253.1
Q ss_pred ccccceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 93 RKRSKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 93 ~~~s~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
.+..+|..|+|+ +++||+++.|++|++||+++|++++++. |...|++++|+|+|+.|++++. | ++++
T Consensus 56 ~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~----d------g~V~ 123 (902)
T 2oaj_A 56 EDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF--VPGKITSIDTDASLDWMLIGLQ----N------GSMI 123 (902)
T ss_dssp SSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEET----T------SCEE
T ss_pred CCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEcC----C------CcEE
Confidence 367899999999 8899999999999999999999999886 4568999999999999999774 3 5999
Q ss_pred EeEeccCCcCcccce-------e-eeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC----------
Q 011452 172 IEYIRRGKPDAGFAL-------F-ESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD---------- 233 (485)
Q Consensus 172 lw~i~~G~~~~~~~l-------f-~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~---------- 233 (485)
|||+..+++.. ..+ . ...+...+.+|+|+|.++.+|++|+.|++| |||+++++++.++..
T Consensus 124 lwd~~~~~~~~-~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~ 201 (902)
T 2oaj_A 124 VYDIDRDQLSS-FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGD 201 (902)
T ss_dssp EEETTTTEEEE-EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCST
T ss_pred EEECCCCcccc-ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcc
Confidence 99998877521 000 0 013456678999994356789999999999 999999999888753
Q ss_pred ----------CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEE--ee---cC-------------CcceeEEEE
Q 011452 234 ----------KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS--FN---HL-------------LHRNKKVDF 285 (485)
Q Consensus 234 ----------~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~t--l~---~~-------------~~~~~~V~f 285 (485)
..|.+|+|||++.++++++. |++|+|||+.+|+++.. +. +| ...+.+|+|
T Consensus 202 ~~~~~~~~h~~~V~~v~fspdg~~lasgs~--Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w 279 (902)
T 2oaj_A 202 FSEKTNEKRTPKVIQSLYHPNSLHIITIHE--DNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYW 279 (902)
T ss_dssp TCCCTTSCBCCCEEEEEECTTSSEEEEEET--TCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEE
T ss_pred cccccccccCCCeEEEEEcCCCCEEEEEEC--CCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEE
Confidence 35999999997776666554 58999999999999864 31 22 335778888
Q ss_pred Ee---cCCCE----------------------------------------------------------------------
Q 011452 286 IE---QFNEK---------------------------------------------------------------------- 292 (485)
Q Consensus 286 ~~---~~~~~---------------------------------------------------------------------- 292 (485)
++ |++..
T Consensus 280 ~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~ 359 (902)
T 2oaj_A 280 MCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFA 359 (902)
T ss_dssp EECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHH
T ss_pred EecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcC
Confidence 53 22112
Q ss_pred -------EEEEeCCCcEEEEECCCCeeEE-----------------------------------------ecccCCCceE
Q 011452 293 -------LLVKQENENLQILDVRNFELTE-----------------------------------------VSRTEFMTPS 324 (485)
Q Consensus 293 -------lls~s~D~tIkIWDv~tg~~~~-----------------------------------------~l~gh~~~v~ 324 (485)
+++.+.|++|++||+.+|.... .+.||...+.
T Consensus 360 g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~ 439 (902)
T 2oaj_A 360 GCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKR 439 (902)
T ss_dssp HTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCC
T ss_pred CCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCC
Confidence 2333445778888877664321 1345666666
Q ss_pred EEEEcCCCcEEEEEe-CCcEEEEeCC-CcEE----EE--ee-----cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCC
Q 011452 325 AFIFLYENQLFLTFR-NRTVAVWNFR-GELV----TS--FE-----DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDP 391 (485)
Q Consensus 325 avaFspdg~llaS~s-D~TIklWd~~-G~ll----~t--l~-----gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~ 391 (485)
+++|+|||++|||++ |+|||+||++ |++. .. +. +|..+ |++|+|||||++||+|+.
T Consensus 440 sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~-----V~svafspdg~~LAsgs~------ 508 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELA-----VDKISFAAETLELAVSIE------ 508 (902)
T ss_dssp CCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCC-----EEEEEEETTTTEEEEEET------
T ss_pred cccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCc-----eeEEEecCCCCeEEEEec------
Confidence 777899999999999 9999999996 6431 11 22 78877 999999999999999997
Q ss_pred CCcCCCCeEEEEeCCCC---------------------------------------------eEEEEecCCCCCCCCccc
Q 011452 392 LAEGNAGSINISNILTG---------------------------------------------KCLAKIRASNGLPAENEC 426 (485)
Q Consensus 392 ~~~~~DgtIklWdl~TG---------------------------------------------k~l~tl~gH~~~~~~~~~ 426 (485)
||+|||||+.++ +|+++|.+|.
T Consensus 509 -----DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~-------- 575 (902)
T 2oaj_A 509 -----TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK-------- 575 (902)
T ss_dssp -----TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS--------
T ss_pred -----CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC--------
Confidence 799999999887 3577777776
Q ss_pred ccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 427 SCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
..|++|+||||| +||+|+.|++|+|||.
T Consensus 576 ------------------------------~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 576 ------------------------------GKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp ------------------------------CSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ------------------------------CcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 399999999999 9999999999999984
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.9e-45 Score=358.38 Aligned_cols=296 Identities=8% Similarity=0.088 Sum_probs=240.6
Q ss_pred ccccccccccCCCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeeccc-----CcEEEEeecCCcccEEEEEE
Q 011452 70 IRLQEEYDTHDPKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRET-----NQRICFLNVTADEVIRSLFY 144 (485)
Q Consensus 70 ~~l~~~~~~~~~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~t-----G~~l~tl~g~~~~~i~sv~~ 144 (485)
+.|+.+++.|..++.++.+.|. .+++||+++.|+++++|++.+ +.++.++.+ |...|.+++|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~------------~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~ 73 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAG------------QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTL 73 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSS------------CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEE
T ss_pred EEEEEEEccccceEEEEEccCC------------CccEEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEE
Confidence 4556666666665555555443 037999999999999999864 456778887 8889999999
Q ss_pred eeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC
Q 011452 145 NKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN 224 (485)
Q Consensus 145 spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~ 224 (485)
+|+|+.|+++|. | ++++|||+.+|++. ..|. +|...+..|+|+ |+|++|++++.|++|||||++
T Consensus 74 s~dg~~l~s~s~----D------~~v~~wd~~~~~~~---~~~~-~h~~~v~~~~~~-~~~~~l~s~s~D~~i~vwd~~- 137 (319)
T 3frx_A 74 TADGAYALSASW----D------KTLRLWDVATGETY---QRFV-GHKSDVMSVDID-KKASMIISGSRDKTIKVWTIK- 137 (319)
T ss_dssp CTTSSEEEEEET----T------SEEEEEETTTTEEE---EEEE-CCSSCEEEEEEC-TTSCEEEEEETTSCEEEEETT-
T ss_pred CCCCCEEEEEeC----C------CEEEEEECCCCCee---EEEc-cCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECC-
Confidence 999999999874 4 59999999988762 2233 345667789998 799999999999999999996
Q ss_pred CeEEEEEcC--CcEEEEEEcCCc------eEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEE
Q 011452 225 YTMLYSISD--KNVQEIKISPGI------MLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK 296 (485)
Q Consensus 225 g~~l~tl~~--~~V~~VafSpg~------~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~ 296 (485)
++++.++.+ ..|.+++|+|.. .++++++ .|++|++||++++++..++.+|...+..++|+ |++..|+++
T Consensus 138 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s-p~g~~l~s~ 214 (319)
T 3frx_A 138 GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG--NDKMVKAWNLNQFQIEADFIGHNSNINTLTAS-PDGTLIASA 214 (319)
T ss_dssp SCEEEEECCCSSCEEEEEECCC------CCEEEEEE--TTSCEEEEETTTTEEEEEECCCCSCEEEEEEC-TTSSEEEEE
T ss_pred CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe--CCCEEEEEECCcchhheeecCCCCcEEEEEEc-CCCCEEEEE
Confidence 567777754 589999999843 3455544 45899999999999999999999999999997 788899999
Q ss_pred eCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCC---CCCCeeEEE
Q 011452 297 QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWH---PDCNTNNIY 372 (485)
Q Consensus 297 s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~---~~~~v~sva 372 (485)
+.|++|+|||+.+++++.++.+| ..|.+++|+|++++|+++++..|++|+++ +.++..+..+.... ....+.+++
T Consensus 215 ~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 293 (319)
T 3frx_A 215 GKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLA 293 (319)
T ss_dssp ETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEE
Confidence 99999999999999999999765 58999999999999999987789999997 77787776542210 012288999
Q ss_pred ECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe
Q 011452 373 ITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK 409 (485)
Q Consensus 373 fSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk 409 (485)
|||||++|++|+. |++|+|||+.|++
T Consensus 294 ~spdg~~l~sg~~-----------Dg~i~vWd~~t~~ 319 (319)
T 3frx_A 294 WSADGQTLFAGYT-----------DNVIRVWQVMTAN 319 (319)
T ss_dssp ECTTSSEEEEEET-----------TSCEEEEEEEEC-
T ss_pred ECCCCCEEEEeec-----------CceEEEEEEeecC
Confidence 9999999999997 7999999998753
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9.9e-46 Score=372.42 Aligned_cols=285 Identities=11% Similarity=0.145 Sum_probs=239.4
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
|..+|.+|.|+ +++||+++.||+|++||..+++++.++.+ |...|.+++|+|+|+.||+++ .| .+++
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~s~~g~~las~~----~d------~~v~ 133 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAFAPNGQSVACGG----LD------SACS 133 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEECTTSSEEEECC----SS------SCCE
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEECCCCCEEEEee----CC------CcEE
Confidence 66667777776 89999999999999999999999999987 888999999999999999866 34 5899
Q ss_pred EeEeccCCcCcc----cceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE-------cCCcEEEEE
Q 011452 172 IEYIRRGKPDAG----FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-------SDKNVQEIK 240 (485)
Q Consensus 172 lw~i~~G~~~~~----~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl-------~~~~V~~Va 240 (485)
||++..+....+ ...+. +|...+..+.|.+.++..|++|+.|++|+|||+.+++++..+ +...|.+++
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLT-GHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCC-CCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEECCCCccccCCccceeecc-CCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 999865432111 11222 345566788998555678999999999999999999998877 235799999
Q ss_pred EcC-CceEEEEEcCCCCeeEEEEecC-CCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc
Q 011452 241 ISP-GIMLLIFTKASGHVPLKILSIE-DGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT 318 (485)
Q Consensus 241 fSp-g~~ll~sss~~~D~tIklWdi~-tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g 318 (485)
|+| ++.++++++ .|++|+|||+. ++++++++.+|.+.+.+|+|+ |++..|++++.|++|+|||+++++++.++..
T Consensus 213 ~~~~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 213 INSLNANMFISGS--CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF-PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp ECSSSCCEEEEEE--TTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC-TTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred eecCCCCEEEEEE--CCCeEEEEECCCCCcceEEECCcCCCeEEEEEe-cCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 985 665555554 45899999997 668899999999999999997 7888999999999999999999999988865
Q ss_pred CCC-------ceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEe----ecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 319 EFM-------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF----EDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 319 h~~-------~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl----~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
|.. .|.+++|+|+|++|++++ |++|+|||+. ++++.++ .+|... |++++|+|||++|+|||.
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGR-----ISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCC-----CCEEEECSSSSEEEEECT
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCc-----eEEEEECCCCCEEEEeeC
Confidence 533 489999999999999999 9999999995 9999888 678776 999999999999999987
Q ss_pred CCCCCCCCcCCCCeEEEEeCCCCe
Q 011452 386 ADSDDPLAEGNAGSINISNILTGK 409 (485)
Q Consensus 386 d~~~d~~~~~~DgtIklWdl~TGk 409 (485)
|++|+||++..++
T Consensus 365 -----------D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 365 -----------DKNLKIWAFSGHR 377 (380)
T ss_dssp -----------TSCEEEEECCSSS
T ss_pred -----------CCCEEEEecCCCc
Confidence 7999999987543
No 33
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-46 Score=419.27 Aligned_cols=320 Identities=13% Similarity=0.129 Sum_probs=248.3
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEE-----------EEeecCCcccEEEEEEeeCC-CEEEEEEeecC
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRI-----------CFLNVTADEVIRSLFYNKNN-DSLITVSVYAS 159 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l-----------~tl~g~~~~~i~sv~~spdg-~~Las~S~d~~ 159 (485)
+...|..++|+ +++||+++.||+|++||++++++. .++. +|...|++|+|+|++ ..|++++
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~-~h~~~V~sl~~sp~~~~~l~~g~---- 171 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA-ARLSPIVSIQWNPRDIGTVLISY---- 171 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS-SCCCCCCEEEEETTEEEEEEEEC----
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc-cCCCCeEEEEEccCCCCEEEEEe----
Confidence 45678888888 999999999999999999988764 2233 377899999999974 6677654
Q ss_pred CCCcccceeEEEEeEeccCCcCcccceeee-----------------ccccCceEEEEeCCCCeEEEEeeCCCcEEEeec
Q 011452 160 DNFSSLRCRSTRIEYIRRGKPDAGFALFES-----------------ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDL 222 (485)
Q Consensus 160 ~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-----------------~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl 222 (485)
.| +++ |||++.+++.. .|.. .+...+..|+|+ |||++||+++.|++|+|||+
T Consensus 172 ~d------g~v-lWd~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs-pdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 172 EY------VTL-TYSLVENEIKQ---SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH-PNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp SS------CEE-EEETTTTEEEE---EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC-TTSSEEEEEETTCCEEEEET
T ss_pred CC------CcE-EEECCCCceEE---EEecccCCcCCCcccccccccccCCCeEEEEEc-CCCCEEEEEECCCeEEEEEC
Confidence 44 589 99998887632 2221 122457789998 79999999999999999999
Q ss_pred CCCeEEEE--E-----c-------------CCcEEEEEEc----CC-ceEEEEEcCC-----------------------
Q 011452 223 KNYTMLYS--I-----S-------------DKNVQEIKIS----PG-IMLLIFTKAS----------------------- 254 (485)
Q Consensus 223 ~~g~~l~t--l-----~-------------~~~V~~VafS----pg-~~ll~sss~~----------------------- 254 (485)
++++++.. + + ...|.+|+|+ |+ ..++++++.+
T Consensus 241 ~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s 320 (902)
T 2oaj_A 241 NSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITS 320 (902)
T ss_dssp TTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCC
T ss_pred CCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccc
Confidence 99998764 3 1 1269999995 43 3444444221
Q ss_pred ---------------------------------------------------CCeeEEEEecCCCeEEEE-----------
Q 011452 255 ---------------------------------------------------GHVPLKILSIEDGTVLKS----------- 272 (485)
Q Consensus 255 ---------------------------------------------------~D~tIklWdi~tG~~L~t----------- 272 (485)
.|++|++||+.+|+.+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~ 400 (902)
T 2oaj_A 321 YEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWL 400 (902)
T ss_dssp HHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTB
T ss_pred hhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCccccc
Confidence 024577777777754322
Q ss_pred ------------------------------eecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE--e----c
Q 011452 273 ------------------------------FNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE--V----S 316 (485)
Q Consensus 273 ------------------------------l~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~--~----l 316 (485)
|.||...+..|+|+ |++..|++++.|+||||||+.++++.. . +
T Consensus 401 ~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~s-pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l 479 (902)
T 2oaj_A 401 RPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPA-EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNL 479 (902)
T ss_dssp TTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCC-SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEH
T ss_pred CCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccccc-ccCcEEEEecCCCcEEEEECCCccccCCceEEeec
Confidence 22333344445554 567788889999999999999885321 1 1
Q ss_pred -----ccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-C---------------------------------------
Q 011452 317 -----RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-G--------------------------------------- 350 (485)
Q Consensus 317 -----~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G--------------------------------------- 350 (485)
.+|...|++|+|+|||++||+++ |++|+|||++ +
T Consensus 480 ~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (902)
T 2oaj_A 480 SRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPT 559 (902)
T ss_dssp HHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCT
T ss_pred hhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCC
Confidence 28999999999999999999999 9999999995 5
Q ss_pred ------cEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEE--Eec----CCC
Q 011452 351 ------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLA--KIR----ASN 418 (485)
Q Consensus 351 ------~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~--tl~----gH~ 418 (485)
+++.+|++|..+ |++|+||||| +||+|+. |++|+|||+.+++.+. .+. +|+
T Consensus 560 ~~~~g~~~~~~l~~h~~~-----V~svafSpdG-~lAsgs~-----------D~tv~lwd~~~~~~~~~~~~~~~~~gh~ 622 (902)
T 2oaj_A 560 GVRQGFMPSTAVHANKGK-----TSAINNSNIG-FVGIAYA-----------AGSLMLIDRRGPAIIYMENIREISGAQS 622 (902)
T ss_dssp TCSEEEEEEEEECCCSCS-----EEEEEECBTS-EEEEEET-----------TSEEEEEETTTTEEEEEEEGGGTCSSCC
T ss_pred CCCCccceeEEEEcCCCc-----EEEEEecCCc-EEEEEeC-----------CCcEEEEECCCCeEEEEeehhHhccccc
Confidence 358899999988 9999999999 9999997 7999999999888775 332 665
Q ss_pred CCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEc-----CCC---CEEEEecCCCcEEEccC
Q 011452 419 GLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYD-----EDR---NEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fs-----pDg---~~LaSgs~DgtVklWd~ 485 (485)
.+|++|+|| ||| +.|+||+.|++|++||+
T Consensus 623 --------------------------------------~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 623 --------------------------------------ACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp --------------------------------------CCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred --------------------------------------cceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 289999999 886 89999999999999984
No 34
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.1e-44 Score=408.72 Aligned_cols=368 Identities=15% Similarity=0.205 Sum_probs=296.8
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
|...|..++|+ +++||+++.||+|++||..+|+++.++.+ |...|.+++|+|||+.||+++. | ++++
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~----d------~~v~ 682 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDSYIATCSA----D------KKVK 682 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEET----T------SEEE
T ss_pred ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCCEEEEEeC----C------CeEE
Confidence 78889999999 99999999999999999999999999987 8889999999999999999773 4 5999
Q ss_pred EeEeccCCcCcccceeeeccccCceEEEEeCC-CCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEE
Q 011452 172 IEYIRRGKPDAGFALFESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLL 248 (485)
Q Consensus 172 lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~p-nG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll 248 (485)
||++.+|++.. .|. .+...+..++|++. ++.+|++++.|++|+|||+.+++++.++.+ ..|.+++|+|++.++
T Consensus 683 vwd~~~~~~~~---~~~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 683 IWDSATGKLVH---TYD-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EEETTTCCEEE---EEE-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEE
T ss_pred EEECCCCceEE---EEc-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEE
Confidence 99999998732 333 35566778999832 667999999999999999999999998864 589999999977666
Q ss_pred EEEcCCCCeeEEEEecCCCeEEEEee------------------------------------------------------
Q 011452 249 IFTKASGHVPLKILSIEDGTVLKSFN------------------------------------------------------ 274 (485)
Q Consensus 249 ~sss~~~D~tIklWdi~tG~~L~tl~------------------------------------------------------ 274 (485)
++++. |++|++||+.++++++++.
T Consensus 759 ~s~s~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~ 836 (1249)
T 3sfz_A 759 ASCSA--DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIH 836 (1249)
T ss_dssp EEEES--SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred EEEEC--CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEc
Confidence 66543 4899999999888776653
Q ss_pred -cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC---
Q 011452 275 -HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR--- 349 (485)
Q Consensus 275 -~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~--- 349 (485)
+|...+..++|+ |++..+++++.|++|++||+.+++++..+.+|...|.+++|+|+|++|+|++ |++|++||+.
T Consensus 837 ~~~~~~v~~~~~s-p~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~ 915 (1249)
T 3sfz_A 837 TGHHSTIQYCDFS-PYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVC 915 (1249)
T ss_dssp CSSSSCCCEEEEC-SSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHH
T ss_pred CCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccc
Confidence 566677889996 6788899999999999999999999999999999999999999999999999 9999999731
Q ss_pred -----------------------------------------------------------------------------CcE
Q 011452 350 -----------------------------------------------------------------------------GEL 352 (485)
Q Consensus 350 -----------------------------------------------------------------------------G~l 352 (485)
+++
T Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~ 995 (1249)
T 3sfz_A 916 KNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRV 995 (1249)
T ss_dssp SCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSC
T ss_pred eeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCce
Confidence 445
Q ss_pred EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCC---------------------------C--CCCCcCCCCeEEEE
Q 011452 353 VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADS---------------------------D--DPLAEGNAGSINIS 403 (485)
Q Consensus 353 l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~---------------------------~--d~~~~~~DgtIklW 403 (485)
+.++.+|... |.+++|+|||++|+|++.|.. . .-.+.+.|++|++|
T Consensus 996 ~~~~~~h~~~-----v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vw 1070 (1249)
T 3sfz_A 996 FSSGVGHKKA-----VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVW 1070 (1249)
T ss_dssp EEECCCCSSC-----CCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEE
T ss_pred eeecccCCCc-----eEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEE
Confidence 5667778766 899999999999999986311 0 01234567888888
Q ss_pred eCCCCeEEEEecCCCCCCCCcccccCCCCCCCCcccccccccc-----ccccchhcccCCeEEEEEcCCCCEEEEecCCC
Q 011452 404 NILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHAS-----RIRSTVAEALEDITALFYDEDRNEIYTGNRHG 478 (485)
Q Consensus 404 dl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~V~sl~fspDg~~LaSgs~Dg 478 (485)
|+.+|+++.++.+|.+ +....+.+++++.+.++..+...... ....+...+...|++++|+|||+.||||+.||
T Consensus 1071 d~~~~~~~~~~~~~~~-~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg 1149 (1249)
T 3sfz_A 1071 NVITGRIERDFTCHQG-TVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNG 1149 (1249)
T ss_dssp ETTTTCCCEEEECCSS-CCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred ECCCCceeEEEcccCC-cEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCC
Confidence 8888999999999875 34556666666654444332221111 11122223345899999999999999999999
Q ss_pred cEEEccC
Q 011452 479 LVHVWSN 485 (485)
Q Consensus 479 tVklWd~ 485 (485)
+|+|||.
T Consensus 1150 ~i~vwd~ 1156 (1249)
T 3sfz_A 1150 EIRIWNV 1156 (1249)
T ss_dssp CCCEEES
T ss_pred EEEEEEC
Confidence 9999984
No 35
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.9e-45 Score=369.56 Aligned_cols=286 Identities=9% Similarity=0.074 Sum_probs=221.2
Q ss_pred ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee------ccccCceEEEEeCCCCeEEEE
Q 011452 137 EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES------ESLKWPGFVEFDDVNGKVLTY 210 (485)
Q Consensus 137 ~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~------~~~~~~~~V~Fs~pnG~~Las 210 (485)
-+|++|+|+|||+.||+++.+.+. +.+ -..++||++..+.......+... .+-.++.+++|+ +..+++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~--sGi-~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~---~~~~~~ 88 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGN--NGI-PNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS---KGIILV 88 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSS--SSC-CEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE---TTEEEE
T ss_pred CCEEEEEEeCCCcEEEEECCCccc--cCC-CCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC---CCEEEE
Confidence 379999999999999998743321 001 04799999866554211111110 122345566665 444444
Q ss_pred -----------eeCCCcEEEeecCCCe-EE---EEEc-------CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCe
Q 011452 211 -----------SAQDSIYKVFDLKNYT-ML---YSIS-------DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGT 268 (485)
Q Consensus 211 -----------~s~D~tiKlWdl~~g~-~l---~tl~-------~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~ 268 (485)
++.|+++|+|++.+++ .+ .... +..|..|+|||++.+++.++.+.|++|||||+++++
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~ 168 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT 168 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc
Confidence 4578999999987654 22 2221 246999999998877766666778999999999999
Q ss_pred EEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE--ecccCCCceEEEEEcCCCcEEEEEe-CC----
Q 011452 269 VLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE--VSRTEFMTPSAFIFLYENQLFLTFR-NR---- 341 (485)
Q Consensus 269 ~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~--~l~gh~~~v~avaFspdg~llaS~s-D~---- 341 (485)
++.++. |.+.+.+|+|+ |++..+++++ |+++++|+..+++++. +..+|...|++++|+|||+++++++ |+
T Consensus 169 ~~~~~~-~~~~V~~v~fs-pdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 169 EKFEIE-TRGEVKDLHFS-TDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp EEEEEE-CSSCCCEEEEC-TTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred EEEEeC-CCCceEEEEEc-cCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 999997 55789999997 6777777666 5567777777776643 4567999999999999999999999 87
Q ss_pred cEEEEeCC-CcE----EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe-c
Q 011452 342 TVAVWNFR-GEL----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI-R 415 (485)
Q Consensus 342 TIklWd~~-G~l----l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl-~ 415 (485)
+|++||+. ++. ...+.+|... |++++|||||++||+|+. |++|+|||+.+|+++.++ +
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~-----V~~~~~Spdg~~lasgs~-----------D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTNRFKG-----ITSMDVDMKGELAVLASN-----------DNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEESSCSC-----EEEEEECTTSCEEEEEET-----------TSCEEEEETTTTEEEEEETT
T ss_pred EEeecccccceecceeeeeecCCCCC-----eEeEEECCCCCceEEEcC-----------CCEEEEEECCCCcEEEEecC
Confidence 78999984 442 4578899877 999999999999999997 799999999999999985 7
Q ss_pred CCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 416 ASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 416 gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
+|.+ .|++|+|||||++|||||.|+|||||++
T Consensus 310 gH~~--------------------------------------~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 310 AHSF--------------------------------------AITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp SSSS--------------------------------------CEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred cccC--------------------------------------CEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 8983 8999999999999999999999999985
No 36
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.9e-45 Score=365.13 Aligned_cols=287 Identities=12% Similarity=0.123 Sum_probs=223.6
Q ss_pred cccccceEEEEEe--cCEEEEEeC------CCeEEeeecccCcEEEEe---ecCCcccEEEEEEeeCCCEEEEEEeecCC
Q 011452 92 LRKRSKIIEIVAA--RDIVFALAQ------SGVCAAFCRETNQRICFL---NVTADEVIRSLFYNKNNDSLITVSVYASD 160 (485)
Q Consensus 92 ~~~~s~V~~i~~s--~~~ias~s~------dgtiklW~~~tG~~l~tl---~g~~~~~i~sv~~spdg~~Las~S~d~~~ 160 (485)
..|...|.+|+|+ |++||++|. |+++++|+..+|....++ ...|...|.+|+|+|++..| +++ .
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s----~ 113 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VAS----D 113 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEE----T
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEE----C
Confidence 3577788888888 999999998 788999998877643222 22377789999999998755 444 2
Q ss_pred CCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEE
Q 011452 161 NFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQE 238 (485)
Q Consensus 161 d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~ 238 (485)
| ++++||++.+|+......+-..+|...+..|+|+ |||++|++++.|++|+|||+.+++++..+.+ ..|.+
T Consensus 114 d------g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 114 S------GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVF-SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp T------SCEEEC--------CCCCEEECCCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred C------CEEEEeeccccceeEEEeeccCCCCCCEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 3 4899999988876332222222455667889998 7999999999999999999999999998864 58999
Q ss_pred EEEcCCc-eEEEEEcCCCCeeEEEEecCCCeEEEEee--cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEe
Q 011452 239 IKISPGI-MLLIFTKASGHVPLKILSIEDGTVLKSFN--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEV 315 (485)
Q Consensus 239 VafSpg~-~ll~sss~~~D~tIklWdi~tG~~L~tl~--~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~ 315 (485)
|+|+|++ .++++++ .|++|+|||+++|+++..+. .|...+.+|+|++..+..|++++.|++|+|||+++++++++
T Consensus 187 v~~s~~~~~~~~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~ 264 (357)
T 4g56_B 187 VAACPGKDTIFLSCG--EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQT 264 (357)
T ss_dssp EEECTTCSSCEEEEE--TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEE
T ss_pred EEEccCCCceeeeec--cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEE
Confidence 9999743 3444433 45899999999999887765 44456789999744345666788999999999999999999
Q ss_pred cccCCCceEEEEEcCCC-cEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECC-CCCEEEEEecCCCCCC
Q 011452 316 SRTEFMTPSAFIFLYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS-DQDLIISYCKADSDDP 391 (485)
Q Consensus 316 l~gh~~~v~avaFspdg-~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSp-DG~~LaS~s~d~~~d~ 391 (485)
+.+|...|++++|+|++ ++|||++ |++|+|||++ |++++++ +|... |++|+||| ||++|||++.
T Consensus 265 ~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~-----V~~vafsP~d~~~l~s~s~------ 332 (357)
T 4g56_B 265 SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDF-----VTGVAWSPLDHSKFTTVGW------ 332 (357)
T ss_dssp ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSC-----EEEEEECSSSTTEEEEEET------
T ss_pred EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCC-----EEEEEEeCCCCCEEEEEcC------
Confidence 99999999999999987 5799999 9999999997 8888766 79887 99999999 8999999997
Q ss_pred CCcCCCCeEEEEeCCCCe
Q 011452 392 LAEGNAGSINISNILTGK 409 (485)
Q Consensus 392 ~~~~~DgtIklWdl~TGk 409 (485)
||+|+|||+.+..
T Consensus 333 -----Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 333 -----DHKVLHHHLPSEG 345 (357)
T ss_dssp -----TSCEEEEECC---
T ss_pred -----CCeEEEEECCCCC
Confidence 7999999997643
No 37
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-46 Score=400.42 Aligned_cols=312 Identities=12% Similarity=-0.004 Sum_probs=227.3
Q ss_pred CEEEEEeCCCeEEeeecccCcEE----EEeecCCcccEEEEEEeeC------CCEEEEEEeecCCCCcccceeEEEEeEe
Q 011452 106 DIVFALAQSGVCAAFCRETNQRI----CFLNVTADEVIRSLFYNKN------NDSLITVSVYASDNFSSLRCRSTRIEYI 175 (485)
Q Consensus 106 ~~ias~s~dgtiklW~~~tG~~l----~tl~g~~~~~i~sv~~spd------g~~Las~S~d~~~d~stL~~~t~~lw~i 175 (485)
+++|+++.|++|+||++.++++. .++.+ |...|++|+|+|+ +++||++|. | ++++||++
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~-~~~~V~~v~wsp~~~~~~~~~~LAs~s~----D------gtvrlWd~ 242 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVH-SFGEVWDLKWHEGCHAPHLVGCLSFVSQ----E------GTINFLEI 242 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEE-CCCSEEEEEECSSCCCSSSSCEEEEEET----T------SCEEEEEC
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEe-cCCcEEEEEECCCCCCCCCCceEEEEec----C------CeEEEEEc
Confidence 35778889999999999988753 33444 6678999999997 579999884 4 59999999
Q ss_pred ccCCcCcc------cceeee-ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe-EEEEE--cCCcEEEE--EEcC
Q 011452 176 RRGKPDAG------FALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSI--SDKNVQEI--KISP 243 (485)
Q Consensus 176 ~~G~~~~~------~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~-~l~tl--~~~~V~~V--afSp 243 (485)
..++.... .+.+.. .+...+.+|+|+ +++ .||+|+.|++|+|||+.+++ ++.++ |...|.+| +|+|
T Consensus 243 ~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s-~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~ 320 (524)
T 2j04_B 243 IDNATDVHVFKMCEKPSLTLSLADSLITTFDFL-SPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD 320 (524)
T ss_dssp CCCSSSSSEEECCCSCSEEECCTTTCEEEEEES-SSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT
T ss_pred CCCccccccceeecCceEEEEcCCCCEEEEEec-CCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC
Confidence 87753210 111111 244567789998 444 79999999999999999774 33334 56789999 5778
Q ss_pred Cc-eEEEEEcCCCCeeEEEEecCCCeEEEEeecCCc--ceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCC
Q 011452 244 GI-MLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH--RNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEF 320 (485)
Q Consensus 244 g~-~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~--~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~ 320 (485)
++ .++++++ .|++|||||+.++++++++.+|.. .+.+|+|+ |++..+++++.|++|||||++++.++.++.+|.
T Consensus 321 ~g~~~laS~S--~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs-p~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~ 397 (524)
T 2j04_B 321 FEDTVVSTVA--VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC-PQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE 397 (524)
T ss_dssp TSCCEEEEEE--TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE-TTTTEEEEECSSSEEEEEETTCTTCCEEEEECS
T ss_pred CCCeEEEEec--cCCeEEEEECCCCCcccccccccccCcccceEeC-CCcCeEEEeCCCCcEEEEECcccccceeeecCC
Confidence 65 5555554 458999999999999999988764 47899997 678888999999999999999999999999999
Q ss_pred CceEEEEEcCCCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCe
Q 011452 321 MTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGS 399 (485)
Q Consensus 321 ~~v~avaFspdg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dgt 399 (485)
..|++|+|+|+|++|||++ |++|+|||+.++++.+++.+..++....|++++|+|||+.+.. . +.
T Consensus 398 ~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~-------------~~ 463 (524)
T 2j04_B 398 TTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-D-------------SS 463 (524)
T ss_dssp SCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEE-C-------------CC
T ss_pred CceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEc-c-------------CC
Confidence 9999999999999999999 9999999997665544433222322223789999999996633 1 23
Q ss_pred EEEEeCC-CCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCC---EEEEec
Q 011452 400 INISNIL-TGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRN---EIYTGN 475 (485)
Q Consensus 400 IklWdl~-TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~---~LaSgs 475 (485)
+++|+.. +|+++.+|.+|.. .|++|+|+||++ .||+|+
T Consensus 464 ~~~~~~~~~g~~~~~l~gh~~--------------------------------------~V~~Vafsp~~~~~~~lAsg~ 505 (524)
T 2j04_B 464 YEVYPLTVNDVSKAKIDAHGI--------------------------------------NITCTKWNETSAGGKCYAFSN 505 (524)
T ss_dssp CCCCC-------------CCC--------------------------------------SCCCEEECCSTTTTTEEEEEC
T ss_pred ceecccccCCcceeeecCCCc--------------------------------------eEEEEECCCCCCccHHHHhhc
Confidence 4555543 6999999999973 899999999965 999999
Q ss_pred CCCcEEEccC
Q 011452 476 RHGLVHVWSN 485 (485)
Q Consensus 476 ~DgtVklWd~ 485 (485)
.||+||||++
T Consensus 506 ~~g~vrlw~l 515 (524)
T 2j04_B 506 SAGLLTLEYL 515 (524)
T ss_dssp TTSEEEEEEC
T ss_pred cCceEEEEEc
Confidence 9999999984
No 38
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-44 Score=356.90 Aligned_cols=286 Identities=12% Similarity=0.101 Sum_probs=227.0
Q ss_pred ceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEE--EeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEE
Q 011452 97 KIIEIVAA--RDIVFALAQSGVCAAFCRETNQRIC--FLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (485)
Q Consensus 97 ~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~--tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~l 172 (485)
+|..++|+ +++||+++.|++|++|+.++++.++ .+..+|...|++|+|+|+|++||++|. | ++++|
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~----D------~~v~i 87 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF----D------ATTCI 87 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET----T------SCEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC----C------CcEEE
Confidence 45555555 9999999999999999999887554 333458889999999999999999874 4 58999
Q ss_pred eEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe---EEEEEc--CCcEEEEEEcCCceE
Q 011452 173 EYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSIS--DKNVQEIKISPGIML 247 (485)
Q Consensus 173 w~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~---~l~tl~--~~~V~~VafSpg~~l 247 (485)
|++..++... ...+. +|...+..|+|+ |+|++|++++.|++|+|||+.++. ++..+. ...|.+|+|+|++.+
T Consensus 88 w~~~~~~~~~-~~~~~-~h~~~v~~v~~s-p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 88 WKKNQDDFEC-VTTLE-GHENEVKSVAWA-PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEECCC-EEE-EEEEC-CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEccCCCeEE-EEEcc-CCCCCceEEEEe-CCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 9987765311 11222 355667799998 799999999999999999998763 455664 457999999997766
Q ss_pred EEEEcCCCCeeEEEEecCCCe--EEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCC---------------C
Q 011452 248 LIFTKASGHVPLKILSIEDGT--VLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN---------------F 310 (485)
Q Consensus 248 l~sss~~~D~tIklWdi~tG~--~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~t---------------g 310 (485)
+++++ .|++|+|||+++++ ++.++.+|...+.+|+|+ |++..|++++.|++|+|||+.. .
T Consensus 165 l~s~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s-p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 165 LASAS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD-PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp EEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred EEEEe--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC-CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 66655 34899999999886 568899999999999997 7888999999999999999632 2
Q ss_pred eeEEeccc-CCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-Cc---------EEEEeecCCCCCCCCCeeEEEECCCC-
Q 011452 311 ELTEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE---------LVTSFEDHLLWHPDCNTNNIYITSDQ- 377 (485)
Q Consensus 311 ~~~~~l~g-h~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~---------ll~tl~gH~~~~~~~~v~svafSpDG- 377 (485)
+++.++.+ |...|++++|+|++.+|++++ |++|++|+.+ +. ....+.+|... |++|+|+|++
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~-----V~~v~~~p~~~ 316 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD-----VNCVAWNPKEP 316 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSC-----EEEEEECSSST
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCc-----EeEeEEeCCCc
Confidence 45666666 899999999999999999999 9999999985 32 12345688877 9999999998
Q ss_pred CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 378 DLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 378 ~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
.+|||++. ||+|+||++.+++.+..+
T Consensus 317 ~~laS~s~-----------Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 317 GLLASCSD-----------DGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp TEEEEEET-----------TSCEEEEEECC-------
T ss_pred eEEEEcCC-----------CCcEEEEEecCCCCcccc
Confidence 59999997 799999999988866544
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-44 Score=352.77 Aligned_cols=283 Identities=13% Similarity=0.110 Sum_probs=221.1
Q ss_pred cccceEEEEEecCEEEEEeCCCeEEeeecccC--cEEEEee-cCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEE
Q 011452 94 KRSKIIEIVAARDIVFALAQSGVCAAFCRETN--QRICFLN-VTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (485)
Q Consensus 94 ~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG--~~l~tl~-g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~ 170 (485)
|..+|.++.|+.++||+++.|++|++|++.++ +++.++. ++|...|++|+|+|+|+.||++|. | +++
T Consensus 13 h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~----D------~~v 82 (330)
T 2hes_X 13 YKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF----D------STV 82 (330)
T ss_dssp CSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET----T------SCE
T ss_pred CCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC----C------CcE
Confidence 56778888888779999999999999999875 5666673 448889999999999999999874 4 599
Q ss_pred EEeEeccCCcC--cc--cceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC----CeEEEEEcC--CcEEEEE
Q 011452 171 RIEYIRRGKPD--AG--FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----YTMLYSISD--KNVQEIK 240 (485)
Q Consensus 171 ~lw~i~~G~~~--~~--~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~----g~~l~tl~~--~~V~~Va 240 (485)
+||++..+... .. ...+. +|...+..|+|+ |+|++||+++.|++|+|||+.+ ++++.++.+ ..|.+|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s-p~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWS-NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EEEEC-------CCCEEEEEEC-----CEEEEEEC-TTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EEEEcccCcCccccceeEEEEc-CCCCcEEEEEEC-CCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 99998543211 00 11122 355667789998 7999999999999999999942 357777754 5799999
Q ss_pred EcCCceEEEEEcCCCCeeEEEEecCCC--eEEEEeecCCcceeEEEEEecC-CCEEEEEeCCCcEEEEECCCC-------
Q 011452 241 ISPGIMLLIFTKASGHVPLKILSIEDG--TVLKSFNHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNF------- 310 (485)
Q Consensus 241 fSpg~~ll~sss~~~D~tIklWdi~tG--~~L~tl~~~~~~~~~V~f~~~~-~~~lls~s~D~tIkIWDv~tg------- 310 (485)
|+|++.++++++. |++|||||+.++ +++.++.+|.+.+..++|++.. +..|++++.|++|+|||++++
T Consensus 161 ~~p~~~~l~s~s~--D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~ 238 (330)
T 2hes_X 161 WHPSEALLASSSY--DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQE 238 (330)
T ss_dssp ECSSSSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEE
T ss_pred ECCCCCEEEEEcC--CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccce
Confidence 9997766666554 589999999887 7899999999999999997432 446888899999999999876
Q ss_pred -eeEEeccc-CCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-Cc--EEE-EeecCCC-CCCCCCeeEEEECC--CCCEE
Q 011452 311 -ELTEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE--LVT-SFEDHLL-WHPDCNTNNIYITS--DQDLI 380 (485)
Q Consensus 311 -~~~~~l~g-h~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~--ll~-tl~gH~~-~~~~~~v~svafSp--DG~~L 380 (485)
++...+.+ |...|++++|+|++ +|+|++ |++|+|||.. |+ ++. .+.+|.. . |+.++|+| ||++|
T Consensus 239 ~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~-----v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 239 WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYE-----INVVKWLELNGKTIL 312 (330)
T ss_dssp EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSC-----EEEEEEC-----CCE
T ss_pred eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccce-----EEEEEEecCCCceEE
Confidence 56667765 99999999999876 688888 9999999995 63 343 3467875 5 99999999 79999
Q ss_pred EEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 381 ISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 381 aS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
||++. ||+|+|||+.+
T Consensus 313 as~s~-----------Dg~v~~W~~~~ 328 (330)
T 2hes_X 313 ATGGD-----------DGIVNFWSLEK 328 (330)
T ss_dssp EEEET-----------TSEEEEEEC--
T ss_pred EEecC-----------CCcEEEEEecc
Confidence 99997 79999999864
No 40
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-45 Score=368.17 Aligned_cols=342 Identities=11% Similarity=0.044 Sum_probs=254.5
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEee-CCCEEEEEEeecCCCCcccceeEEEEeEecc---CCc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNK-NNDSLITVSVYASDNFSSLRCRSTRIEYIRR---GKP 180 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~sp-dg~~Las~S~d~~~d~stL~~~t~~lw~i~~---G~~ 180 (485)
++.+++++ .|+ .+|+++.++..+|...|++|+|+| +|+.||++|. | ++++||++.. ++.
T Consensus 39 ~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~----d------g~v~vwd~~~~~~~~~ 101 (437)
T 3gre_A 39 QEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSD----Q------GVIKIWNLKEIIVGEV 101 (437)
T ss_dssp CCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEET----T------SEEEEEEHHHHHTTCC
T ss_pred cccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecC----C------ceEEEeECcccccCcc
Confidence 66666655 498 459999999556989999999999 9999999874 4 5999999976 553
Q ss_pred CcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecC---CCeEEEEEcCCcEEEEEEc---------------
Q 011452 181 DAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK---NYTMLYSISDKNVQEIKIS--------------- 242 (485)
Q Consensus 181 ~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~---~g~~l~tl~~~~V~~VafS--------------- 242 (485)
.. ..+...+...+..|+|+ |++++|++++.|++|+|||+. +++++..+..+.|..+.|+
T Consensus 102 ~~--~~~~~~h~~~v~~~~~~-~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 102 YS--SSLTYDCSSTVTQITMI-PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp CS--CSEEEECSSCEEEEEEC-TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred cc--eeeeccCCCCEEEEEEe-CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 21 12222345667899998 799999999999999999994 6776666554455555544
Q ss_pred -CCceEEEEEcCCCCeeEEEEecCCCeEEEEeec--CCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecc-c
Q 011452 243 -PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH--LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR-T 318 (485)
Q Consensus 243 -pg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~--~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~-g 318 (485)
|++.++++++ .|++|++||+++++++.++.+ |...+.+++|+ |++..|++++.|++|+|||+++++++..+. +
T Consensus 179 ~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (437)
T 3gre_A 179 NEEKSLLVALT--NLSRVIIFDIRTLERLQIIENSPRHGAVSSICID-EECCVLILGTTRGIIDIWDIRFNVLIRSWSFG 255 (437)
T ss_dssp CSSCEEEEEEE--TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEEC-TTSCEEEEEETTSCEEEEETTTTEEEEEEBCT
T ss_pred cCCCCEEEEEe--CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEEC-CCCCEEEEEcCCCeEEEEEcCCccEEEEEecC
Confidence 5555555554 358999999999999999998 78899999996 678889999999999999999999999875 7
Q ss_pred CCCceEEEE----EcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCC------C---------------CCCCeeEE
Q 011452 319 EFMTPSAFI----FLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLW------H---------------PDCNTNNI 371 (485)
Q Consensus 319 h~~~v~ava----Fspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~------~---------------~~~~v~sv 371 (485)
|...|.+++ |+|++++|++++ |++|+|||++ |+++.++.+|... . ....|+++
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 888999994 556899999999 9999999996 9999999988532 1 11227889
Q ss_pred EECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcc--cccCCCCCCCCccccccccccccc
Q 011452 372 YITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENE--CSCSGDYSSGSCNVKKHSHASRIR 449 (485)
Q Consensus 372 afSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 449 (485)
+|+ ++++|+|++. |++|++||+.+++++.++.+|......+. +............... .....
T Consensus 336 ~~~-~~~~l~s~~~-----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 400 (437)
T 3gre_A 336 SVS-NDKILLTDEA-----------TSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRT---STHSV 400 (437)
T ss_dssp EEE-TTEEEEEEGG-----------GTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----------
T ss_pred EEC-CceEEEecCC-----------CCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccc---ccccc
Confidence 999 8899999987 79999999999999999999853100000 0000000000000000 00000
Q ss_pred cchhcccCCeEEEEEcCC--CCEEEEecCCCcEEEcc
Q 011452 450 STVAEALEDITALFYDED--RNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 450 ~~~~~~l~~V~sl~fspD--g~~LaSgs~DgtVklWd 484 (485)
.....+...|++|+|+|+ +..|+||+.||+|+||+
T Consensus 401 ~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 401 DDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred CcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 111223468999999999 88999999999999996
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-43 Score=358.55 Aligned_cols=279 Identities=12% Similarity=0.123 Sum_probs=237.5
Q ss_pred ccccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCC-----------------cccEEEEEEeeCCCEEEE
Q 011452 93 RKRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTA-----------------DEVIRSLFYNKNNDSLIT 153 (485)
Q Consensus 93 ~~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~-----------------~~~i~sv~~spdg~~Las 153 (485)
.|.+.|.+|.|+ |++||+++ ++++++|+..+|+++.++.... +..|++|+|+|||+.||+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 356666777776 99999987 7899999999999999886521 124999999999999999
Q ss_pred EEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-
Q 011452 154 VSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS- 232 (485)
Q Consensus 154 ~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~- 232 (485)
++. | ++++|||+.++++. ..+. +|...+..++|+ |+|++|++++.|++|+|||+.++++..++.
T Consensus 141 ~~~----d------~~i~iwd~~~~~~~---~~~~-~h~~~v~~~~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 141 GAE----D------RLIRIWDIENRKIV---MILQ-GHEQDIYSLDYF-PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EET----T------SCEEEEETTTTEEE---EEEC-CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EcC----C------CeEEEEECCCCcEE---EEEc-cCCCCEEEEEEc-CCCCEEEEecCCCcEEEEECCCCeeEEEEEc
Confidence 774 4 59999999888762 2233 355667789998 799999999999999999999999988875
Q ss_pred CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEEe-------ecCCcceeEEEEEecCCCEEEEEeCCCcEEE
Q 011452 233 DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSF-------NHLLHRNKKVDFIEQFNEKLLVKQENENLQI 304 (485)
Q Consensus 233 ~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~tl-------~~~~~~~~~V~f~~~~~~~lls~s~D~tIkI 304 (485)
...|..++|+| ++.++++++ .|++|+|||+++|+++..+ .+|.+.+.+|+|+ |++..|++++.|++|+|
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGS--LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEE--TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC-TTSSEEEEEETTSEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEc--CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC-CCCCEEEEEeCCCEEEE
Confidence 46899999998 776666655 4589999999999999888 5788899999997 77889999999999999
Q ss_pred EECCC------------CeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeE
Q 011452 305 LDVRN------------FELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 370 (485)
Q Consensus 305 WDv~t------------g~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~s 370 (485)
||+++ +.+..++.+|...|.+++|+|++++|+|++ |++|++||.+ |+++.+|.+|... |.+
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~-----v~~ 357 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS-----VIS 357 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSC-----EEE
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCC-----EEE
Confidence 99986 456677889999999999999999999999 9999999996 9999999999987 999
Q ss_pred EEECC------CCCEEEEEecCCCCCCCCcCCCCeEEEEeCC
Q 011452 371 IYITS------DQDLIISYCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 371 vafSp------DG~~LaS~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
++|+| ++++||||+. ||+|||||+.
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~-----------Dg~i~iW~~~ 388 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSG-----------DCKARIWKYK 388 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEET-----------TSEEEEEEEE
T ss_pred EEecCCcCcCCCCCEEEEECC-----------CCcEEECccc
Confidence 99986 7999999997 7999999975
No 42
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1e-42 Score=354.21 Aligned_cols=303 Identities=13% Similarity=0.170 Sum_probs=260.1
Q ss_pred eEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEecc
Q 011452 98 IIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRR 177 (485)
Q Consensus 98 V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~ 177 (485)
|..+.+.+++||+++.||++++||..+|+++.++.+ |...|+++.|+ ++.|++++. | +++++|++.+
T Consensus 122 ~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~~~----d------g~i~vwd~~~ 188 (445)
T 2ovr_B 122 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DNIIISGST----D------RTLKVWNAET 188 (445)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TTEEEEEET----T------SCEEEEETTT
T ss_pred EEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CCEEEEEeC----C------CeEEEEECCc
Confidence 345566699999999999999999999999999987 88899999998 578998774 4 5999999988
Q ss_pred CCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCCC
Q 011452 178 GKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKASG 255 (485)
Q Consensus 178 G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~~ 255 (485)
|++.. .+. .+...+..++|+ ++.|++++.|++|++||+.+++++.++. ...|.+++| .+..++++ + .
T Consensus 189 ~~~~~---~~~-~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~-~--~ 257 (445)
T 2ovr_B 189 GECIH---TLY-GHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSG-A--Y 257 (445)
T ss_dssp TEEEE---EEC-CCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEE-E--T
T ss_pred CcEEE---EEC-CCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEE-c--C
Confidence 87622 222 244456678885 5679999999999999999999998885 458999999 45555554 3 3
Q ss_pred CeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEE
Q 011452 256 HVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLF 335 (485)
Q Consensus 256 D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~ll 335 (485)
|++|++||+++++++.++.+|...+.+++| ++..+++++.|++|++||+++++++..+.+|...+.++.+ ++++|
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l 332 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNIL 332 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEE
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEE
Confidence 589999999999999999999999999998 5788999999999999999999999999999999988866 56799
Q ss_pred EEEe-CCcEEEEeCC-CcEEEEeec---CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 336 LTFR-NRTVAVWNFR-GELVTSFED---HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 336 aS~s-D~TIklWd~~-G~ll~tl~g---H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
++++ |++|++||++ |+++.++.+ |... |.+++|+ +++|++++. ||+|+|||+.+|++
T Consensus 333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----v~~~~~~--~~~l~s~~~-----------dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA-----VTCLQFN--KNFVITSSD-----------DGTVKLWDLKTGEF 394 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECSTTSCSSC-----EEEEEEC--SSEEEEEET-----------TSEEEEEETTTCCE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEccCCCCCCC-----EEEEEEC--CCEEEEEeC-----------CCeEEEEECCCCce
Confidence 9999 9999999995 999999998 5544 8999995 689999997 79999999999999
Q ss_pred EEEec-----CCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCc----EE
Q 011452 411 LAKIR-----ASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGL----VH 481 (485)
Q Consensus 411 l~tl~-----gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~Dgt----Vk 481 (485)
+.++. +|. ..|++++|+|+|..||+|+.||+ |.
T Consensus 395 ~~~~~~~~~~~~~--------------------------------------~~v~~~~~s~~~~~la~~~~dg~~~~~l~ 436 (445)
T 2ovr_B 395 IRNLVTLESGGSG--------------------------------------GVVWRIRASNTKLVCAVGSRNGTEETKLL 436 (445)
T ss_dssp EEEEEECTTGGGT--------------------------------------CEEEEEEECSSEEEEEEECSSSSSCCEEE
T ss_pred eeeeeccccCCCC--------------------------------------ceEEEEEecCCEEEEEEcccCCCCccEEE
Confidence 99994 332 28999999999999999999998 99
Q ss_pred EccC
Q 011452 482 VWSN 485 (485)
Q Consensus 482 lWd~ 485 (485)
|||.
T Consensus 437 v~df 440 (445)
T 2ovr_B 437 VLDF 440 (445)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-43 Score=351.17 Aligned_cols=267 Identities=12% Similarity=0.064 Sum_probs=219.0
Q ss_pred cCEEEEEeCCCeEEeeeccc-------CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEecc
Q 011452 105 RDIVFALAQSGVCAAFCRET-------NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRR 177 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~t-------G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~ 177 (485)
+++||+++.|++|++|++.+ |+++.++.+ |...|.+|+|+|++..|+++|. | ++++|||+++
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~~l~s~s~----D------~~v~lwd~~~ 107 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENCFAISSSW----D------KTLRLWDLRT 107 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTTEEEEEET----T------SEEEEEETTS
T ss_pred CCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCCEEEEEcC----C------CcEEEEECCC
Confidence 78999999999999999864 456777877 8889999999999999999774 4 5999999999
Q ss_pred CCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE-----cCCcEEEEEEcCCc-------
Q 011452 178 GKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-----SDKNVQEIKISPGI------- 245 (485)
Q Consensus 178 G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl-----~~~~V~~VafSpg~------- 245 (485)
|++.. .|. +|...+..|+|+ |+|++|++++.|++|+|||+.. .+...+ +...|.+++|+|++
T Consensus 108 ~~~~~---~~~-~h~~~v~~v~~s-p~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 181 (343)
T 2xzm_R 108 GTTYK---RFV-GHQSEVYSVAFS-PDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQ 181 (343)
T ss_dssp SCEEE---EEE-CCCSCEEEEEEC-SSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCC
T ss_pred CcEEE---EEc-CCCCcEEEEEEC-CCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccC
Confidence 88622 233 355667799998 7999999999999999999974 444443 23579999999865
Q ss_pred ---eEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCC-CeeEEecccCCC
Q 011452 246 ---MLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-FELTEVSRTEFM 321 (485)
Q Consensus 246 ---~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~t-g~~~~~l~gh~~ 321 (485)
.++++++ .|++|+||| .+++++.++.+|...+..++|+ |++.+|++++.|++|+|||+.+ ..+...+ .|..
T Consensus 182 ~~~~~l~s~~--~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s-~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~ 256 (343)
T 2xzm_R 182 PFAPYFASVG--WDGRLKVWN-TNFQIRYTFKAHESNVNHLSIS-PNGKYIATGGKDKKLLIWDILNLTYPQREF-DAGS 256 (343)
T ss_dssp SSCCEEEEEE--TTSEEEEEE-TTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTCEEEEEESSCCSSCSEEE-ECSS
T ss_pred CCCCEEEEEc--CCCEEEEEc-CCCceeEEEcCccccceEEEEC-CCCCEEEEEcCCCeEEEEECCCCcccceee-cCCC
Confidence 3444433 458999999 5788999999999999999997 7888999999999999999954 4444444 3455
Q ss_pred ceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEE--Eee-----------cCCCCCCCCCeeEEEECCCCCEEEEEecCC
Q 011452 322 TPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVT--SFE-----------DHLLWHPDCNTNNIYITSDQDLIISYCKAD 387 (485)
Q Consensus 322 ~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~--tl~-----------gH~~~~~~~~v~svafSpDG~~LaS~s~d~ 387 (485)
.|.+++|+|++++|++++|++|+|||+. ++.+. +++ +|... |++++|+|||++||+|+.
T Consensus 257 ~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~sp~g~~l~sg~~-- 329 (343)
T 2xzm_R 257 TINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQ-----CTSLAWNALGKKLFAGFT-- 329 (343)
T ss_dssp CEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCC-----EEEEEECSSSCCEEEEET--
T ss_pred cEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCc-----eEEEEECCCCCeEEEecC--
Confidence 7999999999999887779999999995 65433 565 66655 899999999999999997
Q ss_pred CCCCCCcCCCCeEEEEeCCCCe
Q 011452 388 SDDPLAEGNAGSINISNILTGK 409 (485)
Q Consensus 388 ~~d~~~~~~DgtIklWdl~TGk 409 (485)
||+|+|||+.||+
T Consensus 330 ---------Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 330 ---------DGVIRTFSFETSA 342 (343)
T ss_dssp ---------TSEEEEEEEEEEE
T ss_pred ---------CceEEEEEEEccC
Confidence 7999999988764
No 44
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.5e-44 Score=353.12 Aligned_cols=294 Identities=13% Similarity=0.087 Sum_probs=238.3
Q ss_pred cccCcEEEEeecCCcccEEEEEEeeCC-CEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceEEE
Q 011452 122 RETNQRICFLNVTADEVIRSLFYNKNN-DSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGFVE 199 (485)
Q Consensus 122 ~~tG~~l~tl~g~~~~~i~sv~~spdg-~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~V~ 199 (485)
..+.+.+.++.+ |...|++++|+|+| +.||+++. | ++++||++..++... .+.. ++...+..++
T Consensus 60 ~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~----d------g~i~iwd~~~~~~~~---~~~~~~h~~~v~~~~ 125 (383)
T 3ei3_B 60 LKSYKLHRTASP-FDRRVTSLEWHPTHPTTVAVGSK----G------GDIILWDYDVQNKTS---FIQGMGPGDAITGMK 125 (383)
T ss_dssp HTTCEEEEEECC-CSSCEEEEEECSSCTTEEEEEEB----T------SCEEEEETTSTTCEE---EECCCSTTCBEEEEE
T ss_pred ccccceEEeccC-CCCCEEEEEECCCCCCEEEEEcC----C------CeEEEEeCCCcccce---eeecCCcCCceeEEE
Confidence 344566667776 88899999999999 99999874 3 589999998887632 3321 3456677899
Q ss_pred EeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC-----CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEee
Q 011452 200 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (485)
Q Consensus 200 Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~-----~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~ 274 (485)
|++.++++|++++.|++|+|||+.+ ..+..+.. ..|.+++|+|++.++++++ .|++|++||+ +++++.++.
T Consensus 126 ~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~-~~~~~~~~~ 201 (383)
T 3ei3_B 126 FNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD--STGRLLLLGL-DGHEIFKEK 201 (383)
T ss_dssp EETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEE--TTSEEEEEET-TSCEEEEEE
T ss_pred eCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEEC--CCCCEEEEEC-CCCEEEEec
Confidence 9833889999999999999999986 55555532 4699999999766666654 4489999999 789999999
Q ss_pred cCCcceeEEEEEecCCC-EEEEEeCCCcEEEEECCC----CeeEEecccCCCceEEEEEcC-CCcEEEEEe-CCcEEEEe
Q 011452 275 HLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRN----FELTEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWN 347 (485)
Q Consensus 275 ~~~~~~~~V~f~~~~~~-~lls~s~D~tIkIWDv~t----g~~~~~l~gh~~~v~avaFsp-dg~llaS~s-D~TIklWd 347 (485)
+|...+..|+|+ |++. .+++++.|++|+|||+++ ++++..+ +|...|.+++|+| +|++|++++ |++|+|||
T Consensus 202 ~h~~~v~~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 202 LHKAKVTHAEFN-PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYS 279 (383)
T ss_dssp CSSSCEEEEEEC-SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred cCCCcEEEEEEC-CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence 999999999997 5666 788889999999999998 7788777 7999999999999 999999999 99999999
Q ss_pred CC-CcEEEEeecCCCC------------CCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 348 FR-GELVTSFEDHLLW------------HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 348 ~~-G~ll~tl~gH~~~------------~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
++ ++++.++.+|... +|+..+..++|+|||++ ++ +.|++|+|||+.+|+++.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~-----------s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 280 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LL-----------NDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp TTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CT-----------TCCCCEEEEETTTCCEEEEE
T ss_pred CCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--cc-----------CCCCeEEEEecCCCceeeee
Confidence 96 9988888887532 22233444555555555 33 45899999999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 415 RASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 415 ~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.+|.. . ..|..++|+|||+.||+|+ |++|+|||.
T Consensus 347 ~~~~~--------------------------~----------~~~~~~~~s~~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 347 RDPNA--------------------------A----------GIISLNKFSPTGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp CBTTB--------------------------C----------SCCCEEEECTTSSEEEEEE-TTEEEEEEC
T ss_pred cCCCC--------------------------C----------ceEEEEEEecCccEEEEec-CCcEEEEec
Confidence 98652 0 2677789999999999998 999999984
No 45
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-42 Score=336.62 Aligned_cols=292 Identities=13% Similarity=0.117 Sum_probs=243.8
Q ss_pred hccccccccccCCCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCC
Q 011452 69 NIRLQEEYDTHDPKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNN 148 (485)
Q Consensus 69 ~~~l~~~~~~~~~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg 148 (485)
++.++..+..|..++.++.|.|. +++||+++.||++++|+..+|+.+.++.+ |...|.+++|+|+|
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~-------------~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~ 77 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPN-------------GEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDS 77 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTT-------------SSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTS
T ss_pred CceeEEEEcccCCcEEEEEECCC-------------CCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCC
Confidence 34455555555555555555554 89999999999999999999999999887 88899999999999
Q ss_pred CEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEE
Q 011452 149 DSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML 228 (485)
Q Consensus 149 ~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l 228 (485)
+.|++++. | ++++||++.++++.. .+. .+...+..++|+ |+|++|++++.|++|+|||+.+++++
T Consensus 78 ~~l~s~~~----d------~~i~vwd~~~~~~~~---~~~-~~~~~v~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 78 NLLVSASD----D------KTLKIWDVSSGKCLK---TLK-GHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVKTGKCL 142 (312)
T ss_dssp SEEEEEET----T------SEEEEEETTTCCEEE---EEE-CCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CEEEEECC----C------CEEEEEECCCCcEEE---EEc-CCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECCCCEEE
Confidence 99999774 4 599999999888622 233 244567789998 79999999999999999999999999
Q ss_pred EEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEee-cCCcceeEEEEEecCCCEEEEEeCCCcEEEE
Q 011452 229 YSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFN-HLLHRNKKVDFIEQFNEKLLVKQENENLQIL 305 (485)
Q Consensus 229 ~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~-~~~~~~~~V~f~~~~~~~lls~s~D~tIkIW 305 (485)
.++.. ..|.+++|+|++.++++++ .|++|++||+.+++++.++. .+...+..++|+ |++..|++++.|++|+||
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 143 KTLPAHSDPVSAVHFNRDGSLIVSSS--YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAATLDNTLKLW 219 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCSSCCCEEEEEEC-TTSSEEEEEETTTEEEEE
T ss_pred EEecCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCceeeEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEE
Confidence 88864 5899999999776666654 35899999999999998875 445567889996 778899999999999999
Q ss_pred ECCCCeeEEecccCCCceE---EEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEE
Q 011452 306 DVRNFELTEVSRTEFMTPS---AFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 380 (485)
Q Consensus 306 Dv~tg~~~~~l~gh~~~v~---avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~L 380 (485)
|+++++++..+.+|...+. .....+++++|++++ |++|++||++ ++++.++.+|... |.+++|+|++++|
T Consensus 220 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~p~~~~l 294 (312)
T 4ery_A 220 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV-----VISTACHPTENII 294 (312)
T ss_dssp ETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSC-----EEEEEECSSSSEE
T ss_pred ECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCc-----EEEEeecCcCCce
Confidence 9999999999988876533 233457899999999 9999999996 9999999999987 9999999999999
Q ss_pred EEEecCCCCCCCCcCCCCeEEEEeCC
Q 011452 381 ISYCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 381 aS~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
++++. +.|++|+||+..
T Consensus 295 ~s~~~---------~~d~~i~~W~~d 311 (312)
T 4ery_A 295 ASAAL---------ENDKTIKLWKSD 311 (312)
T ss_dssp EEEEC---------TTTCCEEEEECC
T ss_pred EEEEc---------cCCccEEEecCC
Confidence 99984 248999999853
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.4e-43 Score=338.54 Aligned_cols=293 Identities=9% Similarity=0.076 Sum_probs=233.2
Q ss_pred hccccccccccCCCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeecccCc-----EEEEeecCCcccEEEEE
Q 011452 69 NIRLQEEYDTHDPKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRETNQ-----RICFLNVTADEVIRSLF 143 (485)
Q Consensus 69 ~~~l~~~~~~~~~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~-----~l~tl~g~~~~~i~sv~ 143 (485)
.+.|+.+++.|..++.+..|.|. .+++|||+|.||+|++||+.+++ +++++.+ |...|.+++
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~------------~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~ 93 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQ------------FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVV 93 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTT------------CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEE
T ss_pred ceEEEEEECCccCCEEEEEEeCC------------CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEE
Confidence 44555566666665555555553 15799999999999999987654 5677777 888999999
Q ss_pred EeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecC
Q 011452 144 YNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK 223 (485)
Q Consensus 144 ~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~ 223 (485)
|+|||+.|++++. | +.+++|+...+.... .+. .....+..+.|+ +++++|++++.|+.+++||+.
T Consensus 94 ~s~dg~~l~s~~~----d------~~i~~~~~~~~~~~~---~~~-~~~~~~~~~~~~-~~~~~l~s~s~d~~~~~~d~~ 158 (340)
T 4aow_A 94 ISSDGQFALSGSW----D------GTLRLWDLTTGTTTR---RFV-GHTKDVLSVAFS-SDNRQIVSGSRDKTIKLWNTL 158 (340)
T ss_dssp ECTTSSEEEEEET----T------SEEEEEETTTTEEEE---EEE-CCSSCEEEEEEC-TTSSCEEEEETTSCEEEECTT
T ss_pred ECCCCCEEEEEcc----c------ccceEEeecccceee---eec-CCCCceeEEEEe-ecCccceeecCCCeEEEEEeC
Confidence 9999999999774 3 489999986665411 111 222334456776 799999999999999999998
Q ss_pred CCeEEEE-Ec--CCcEEEEEEcCC--ceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeC
Q 011452 224 NYTMLYS-IS--DKNVQEIKISPG--IMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQE 298 (485)
Q Consensus 224 ~g~~l~t-l~--~~~V~~VafSpg--~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~ 298 (485)
....... +. ...|..++|+++ ..++++++ .|++|++||+++++++.++.+|...+.+|+|+ |++..|++++.
T Consensus 159 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~ 235 (340)
T 4aow_A 159 GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG--WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS-PDGSLCASGGK 235 (340)
T ss_dssp SCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEET
T ss_pred CCceEEEEeccccCcccceEEccCCCCcEEEEEc--CCCEEEEEECCCCceeeEecCCCCcEEEEEEC-CCCCEEEEEeC
Confidence 7664433 22 468999999963 34444443 45899999999999999999999999999997 77889999999
Q ss_pred CCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEee---------cCCCCCCCCCe
Q 011452 299 NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFE---------DHLLWHPDCNT 368 (485)
Q Consensus 299 D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~---------gH~~~~~~~~v 368 (485)
|++|+|||+++++++..+.+| ..|.+++|+|++.+++++.|++|+|||++ +.++.++. +|... |
T Consensus 236 Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~-----v 309 (340)
T 4aow_A 236 DGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ-----C 309 (340)
T ss_dssp TCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCC-----E
T ss_pred CCeEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC-----E
Confidence 999999999999999998766 48999999999988776669999999997 77777665 45544 9
Q ss_pred eEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe
Q 011452 369 NNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK 409 (485)
Q Consensus 369 ~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk 409 (485)
++|+|+|||++||||+. ||+|+|||+.||+
T Consensus 310 ~~l~~s~dg~~l~sgs~-----------Dg~v~iW~~~tGt 339 (340)
T 4aow_A 310 TSLAWSADGQTLFAGYT-----------DNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEECTTSSEEEEEET-----------TSCEEEEEEEC--
T ss_pred EEEEECCCCCEEEEEeC-----------CCEEEEEeCCCcC
Confidence 99999999999999997 7999999999985
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-42 Score=335.55 Aligned_cols=296 Identities=14% Similarity=0.149 Sum_probs=244.8
Q ss_pred EEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEE
Q 011452 129 CFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVL 208 (485)
Q Consensus 129 ~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~L 208 (485)
.+|.+ |...|.+++|+|+|+.||+++. | ++++||++.+|++.. .+. .+...+..++|+ |+|++|
T Consensus 26 ~~l~~-h~~~v~~~~~s~~~~~l~~~~~----d------g~i~vwd~~~~~~~~---~~~-~h~~~v~~~~~~-~~~~~l 89 (369)
T 3zwl_B 26 IKLTG-HERPLTQVKYNKEGDLLFSCSK----D------SSASVWYSLNGERLG---TLD-GHTGTIWSIDVD-CFTKYC 89 (369)
T ss_dssp EEEEC-CSSCEEEEEECTTSCEEEEEES----S------SCEEEEETTTCCEEE---EEC-CCSSCEEEEEEC-TTSSEE
T ss_pred EEEEE-eeceEEEEEEcCCCCEEEEEeC----C------CEEEEEeCCCchhhh---hhh-hcCCcEEEEEEc-CCCCEE
Confidence 34666 8889999999999999999774 3 489999998888622 233 245567789998 799999
Q ss_pred EEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEEcCC---CCeeEEEEecCCCe-----------EEEEe
Q 011452 209 TYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIMLLIFTKAS---GHVPLKILSIEDGT-----------VLKSF 273 (485)
Q Consensus 209 as~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~ll~sss~~---~D~tIklWdi~tG~-----------~L~tl 273 (485)
++++.|++|+|||+.+++++.++. ...|.+++|+|++.+++++..+ .++.|++||+.+++ .+..+
T Consensus 90 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 90 VTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 999999999999999999988885 5689999999866666654432 12799999998774 44556
Q ss_pred ecCCc--ceeEEEEEecCCCEEEEEeCCCcEEEEECCC-CeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC
Q 011452 274 NHLLH--RNKKVDFIEQFNEKLLVKQENENLQILDVRN-FELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR 349 (485)
Q Consensus 274 ~~~~~--~~~~V~f~~~~~~~lls~s~D~tIkIWDv~t-g~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~ 349 (485)
..|.+ .+..++|+ |++..|++++.|++|++||+++ ++++..+.+|...|.+++|+|++++|++++ |++|++||++
T Consensus 170 ~~~~~~~~~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 170 ITHEGLDAATVAGWS-TKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp ECCTTCCCEEEEEEC-GGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCcCccceeEEEEc-CCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 66655 78899997 6788899999999999999999 899999999999999999999999999999 9999999996
Q ss_pred -CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCC---CCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcc
Q 011452 350 -GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDD---PLAEGNAGSINISNILTGKCLAKIRASNGLPAENE 425 (485)
Q Consensus 350 -G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d---~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~ 425 (485)
++++..+. |... +..++|+|+|++|++++.+.... .........|++||+.+++++.++.+|..
T Consensus 249 ~~~~~~~~~-~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------ 316 (369)
T 3zwl_B 249 TLQVLKKYE-TDCP-----LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG------ 316 (369)
T ss_dssp TCCEEEEEE-CSSC-----EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS------
T ss_pred CCceeeeec-CCCC-----ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC------
Confidence 99999998 4444 89999999999999998621000 00000011899999999999999999973
Q ss_pred cccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 426 CSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.|++++|+|||+.|+||+.||+|+||+.
T Consensus 317 --------------------------------~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 317 --------------------------------PLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp --------------------------------CEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred --------------------------------cEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 8999999999999999999999999983
No 48
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.1e-42 Score=351.68 Aligned_cols=310 Identities=14% Similarity=0.154 Sum_probs=255.0
Q ss_pred cccc-eEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEE
Q 011452 94 KRSK-IIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (485)
Q Consensus 94 ~~s~-V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~l 172 (485)
|..+ |..+.+.+++||+++.||+|++||..+|+++.++.+ |...|++++|+|++ .|++++. | +++++
T Consensus 120 h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s~----d------g~i~v 187 (464)
T 3v7d_B 120 HMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHGG-ILVSGST----D------RTVRV 187 (464)
T ss_dssp CSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSTT-EEEEEET----T------SCEEE
T ss_pred CCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCC-EEEEEeC----C------CCEEE
Confidence 4555 456667799999999999999999999999999987 88899999999999 8888774 4 59999
Q ss_pred eEeccCCcCcccceeeeccccCceEEEEeC-CCCeEEEEeeCCCcEEEeecCCCeE-----------------------E
Q 011452 173 EYIRRGKPDAGFALFESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTM-----------------------L 228 (485)
Q Consensus 173 w~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~-pnG~~Las~s~D~tiKlWdl~~g~~-----------------------l 228 (485)
|++.+|+.. ..|. .+...+..++|++ +++++|++++.|++|++||+.+++. +
T Consensus 188 wd~~~~~~~---~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 188 WDIKKGCCT---HVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp EETTTTEEE---EEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred EECCCCcEE---EEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 999888762 2333 2455667888874 6889999999999999999988763 3
Q ss_pred EEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEE
Q 011452 229 YSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILD 306 (485)
Q Consensus 229 ~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWD 306 (485)
..+.+ ..|.++ +|++.++++++ .|++|++||+.+++++.++.+|...+.+++|+ |++..+++++.|++|+|||
T Consensus 264 ~~~~~~~~~v~~~--~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 264 GVLRGHMASVRTV--SGHGNIVVSGS--YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD-HERKRCISASMDTTIRIWD 338 (464)
T ss_dssp EEECCCSSCEEEE--EEETTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEE
T ss_pred EEccCccceEEEE--cCCCCEEEEEe--CCCeEEEEECCCCcEEEEecCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEE
Confidence 44444 356665 55344444443 35899999999999999999999999999997 6788999999999999999
Q ss_pred CCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEe
Q 011452 307 VRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 384 (485)
Q Consensus 307 v~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s 384 (485)
+++++++.++.+|...|.+++|+ +++|++++ |++|++||++ ++....+. |... +..++|+|+|++|++++
T Consensus 339 ~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 339 LENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNL-----SAITTFYVSDNILVSGS 410 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTC-----CCEEEEEECSSEEEEEE
T ss_pred CCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCC-----ccEEEEEeCCCEEEEec
Confidence 99999999999999999999997 58899999 9999999996 77766653 3333 77899999999999987
Q ss_pred cCCCCCCCCcCCCCeEEEEeCCCCeEEEE-ecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEE
Q 011452 385 KADSDDPLAEGNAGSINISNILTGKCLAK-IRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALF 463 (485)
Q Consensus 385 ~d~~~d~~~~~~DgtIklWdl~TGk~l~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~ 463 (485)
||+|+|||+.+|+++.+ +.+|. ..|++|+
T Consensus 411 ------------dg~i~iwd~~~g~~~~~~~~~~~--------------------------------------~~v~~v~ 440 (464)
T 3v7d_B 411 ------------ENQFNIYNLRSGKLVHANILKDA--------------------------------------DQIWSVN 440 (464)
T ss_dssp ------------TTEEEEEETTTCCEEESCTTTTC--------------------------------------SEEEEEE
T ss_pred ------------CCeEEEEECCCCcEEehhhccCC--------------------------------------CcEEEEE
Confidence 59999999999999986 55554 2899999
Q ss_pred EcCCCCEEEEecCCCcEEEc
Q 011452 464 YDEDRNEIYTGNRHGLVHVW 483 (485)
Q Consensus 464 fspDg~~LaSgs~DgtVklW 483 (485)
|+ ++..+++++.|+.+.+|
T Consensus 441 ~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 441 FK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EE-TTEEEEEEEETTEEEEE
T ss_pred ec-CCEEEEEEEeCCeEEEE
Confidence 98 45666777788876655
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2e-43 Score=352.33 Aligned_cols=315 Identities=13% Similarity=0.101 Sum_probs=252.8
Q ss_pred eEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEe
Q 011452 98 IIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYI 175 (485)
Q Consensus 98 V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i 175 (485)
+..|+|+ +++||+++.||++++|+..+++...++.. + ..+...+|+|+|+.||+++. | ++++||++
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~----d------g~i~iwd~ 126 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKR-A-DYTAVDTAKLQMRRFILGTT----E------GDIKVLDS 126 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCS-C-CEEEEEEECSSSCEEEEEET----T------SCEEEECT
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEec-C-CceEEEEEecCCCEEEEEEC----C------CCEEEEeC
Confidence 3345566 99999999999999999998888877765 4 56777789999999999774 3 58999999
Q ss_pred ccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcC
Q 011452 176 RRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKA 253 (485)
Q Consensus 176 ~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~ 253 (485)
..+++. ..+. .+...+..++|+ |+|++|++++.|++|+|||+.+++++.++. ...|.+++|+|++.++++++
T Consensus 127 ~~~~~~---~~~~-~h~~~v~~~~~~-~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~- 200 (420)
T 3vl1_A 127 NFNLQR---EIDQ-AHVSEITKLKFF-PSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS- 200 (420)
T ss_dssp TSCEEE---EETT-SSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE-
T ss_pred CCccee---eecc-cccCccEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc-
Confidence 877652 1222 355667789998 799999999999999999999999888875 46899999999766666654
Q ss_pred CCCeeEEEEecCCCeEEEEeec---CCcceeEEEEEe--------------------cCCCEEEEEeCCCcEEEEECCCC
Q 011452 254 SGHVPLKILSIEDGTVLKSFNH---LLHRNKKVDFIE--------------------QFNEKLLVKQENENLQILDVRNF 310 (485)
Q Consensus 254 ~~D~tIklWdi~tG~~L~tl~~---~~~~~~~V~f~~--------------------~~~~~lls~s~D~tIkIWDv~tg 310 (485)
.|++|+|||+++|+++.++.. |...+..++|.+ |++..|++++.|++|+|||++++
T Consensus 201 -~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 201 -LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp -TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC
T ss_pred -CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC
Confidence 358999999999999999985 344455666542 56678888899999999999999
Q ss_pred eeEEec-ccCCCceEEEEEcCCCc-EEEEEe-CCcEEEEeCC-Cc-EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 311 ELTEVS-RTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-GE-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 311 ~~~~~l-~gh~~~v~avaFspdg~-llaS~s-D~TIklWd~~-G~-ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
+.+..+ .+|...|.+++|+|+++ +|++++ |++|++||++ ++ ++.++.+|... .|..++ +|+|++|++++.
T Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~----~v~~~~-~~~~~~l~s~~~ 354 (420)
T 3vl1_A 280 EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT----PINNVY-FAAGALFVSSGF 354 (420)
T ss_dssp CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS----CEEEEE-EETTEEEEEETT
T ss_pred ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC----CceEEE-eCCCCEEEEecC
Confidence 876665 56889999999999999 999999 9999999996 64 58888885432 277775 568899999986
Q ss_pred CCCCCCCCcCCCCeEEEEeCCCCeEE---------EEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhccc
Q 011452 386 ADSDDPLAEGNAGSINISNILTGKCL---------AKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEAL 456 (485)
Q Consensus 386 d~~~d~~~~~~DgtIklWdl~TGk~l---------~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 456 (485)
|++|+|||+.+++.. ..+.+|.
T Consensus 355 -----------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------- 385 (420)
T 3vl1_A 355 -----------DTSIKLDIISDPESERPAIEFETPTFLVSND-------------------------------------- 385 (420)
T ss_dssp -----------TEEEEEEEECCTTCCSCEECTTSCEEECCSS--------------------------------------
T ss_pred -----------CccEEEEeccCCCCCccceeccCccEEccCC--------------------------------------
Confidence 799999998864221 1222332
Q ss_pred CCeEEEEEcCCCC---EEEEecCCCcEEEccC
Q 011452 457 EDITALFYDEDRN---EIYTGNRHGLVHVWSN 485 (485)
Q Consensus 457 ~~V~sl~fspDg~---~LaSgs~DgtVklWd~ 485 (485)
..|.+++|+||++ .|++.+.+|.+++|++
T Consensus 386 ~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 386 DAVSQFCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp CCCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred cceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence 3899999999999 7777778999999984
No 50
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.9e-42 Score=374.71 Aligned_cols=302 Identities=12% Similarity=0.171 Sum_probs=238.9
Q ss_pred EeecCCcccEEEEEEeeCC-CEEEEEEeecCCCCcccceeEEEEeEeccCCcCccc--ceeeeccccCceEEEEeCCCCe
Q 011452 130 FLNVTADEVIRSLFYNKNN-DSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF--ALFESESLKWPGFVEFDDVNGK 206 (485)
Q Consensus 130 tl~g~~~~~i~sv~~spdg-~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~--~lf~~~~~~~~~~V~Fs~pnG~ 206 (485)
.|.+ |.+.|++|+|+|++ +.|+|+|. | ++++||++..++...+. ..+. +|...+..|+|+ |+|+
T Consensus 377 ~l~~-H~~~V~~v~~~~~~~~~l~s~s~----D------~~i~~W~~~~~~~~~~~~~~~~~-~h~~~v~~v~~s-~~g~ 443 (694)
T 3dm0_A 377 TMRA-HTDMVTAIATPIDNADIIVSASR----D------KSIILWKLTKDDKAYGVAQRRLT-GHSHFVEDVVLS-SDGQ 443 (694)
T ss_dssp EEEC-CSSCEEEEECCTTCCSEEEEEET----T------SEEEEEECCCSTTCSCEEEEEEE-CCSSCEEEEEEC-TTSS
T ss_pred hccc-CCceeEEEEecCCCCCEEEEEeC----C------CcEEEEEccCCCcccccccceec-CCCCcEEEEEEC-CCCC
Confidence 5666 89999999999975 78999774 4 59999998665432111 1122 355667789998 7999
Q ss_pred EEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEe----ecCCcce
Q 011452 207 VLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSF----NHLLHRN 280 (485)
Q Consensus 207 ~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl----~~~~~~~ 280 (485)
+|++|+.|++|||||+.+++++.++.+ ..|.+|+|||++.++++++ .|++|+|||+..+ +..++ .+|...+
T Consensus 444 ~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--~D~~i~iwd~~~~-~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 444 FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS--RDRTIKLWNTLGE-CKYTISEGGEGHRDWV 520 (694)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE--TTSCEEEECTTSC-EEEEECSSTTSCSSCE
T ss_pred EEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEe--CCCEEEEEECCCC-cceeeccCCCCCCCcE
Confidence 999999999999999999999888854 5899999999776666655 4589999998654 44444 3677789
Q ss_pred eEEEEEecCC--CEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEe
Q 011452 281 KKVDFIEQFN--EKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF 356 (485)
Q Consensus 281 ~~V~f~~~~~--~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl 356 (485)
..++|++ ++ ..+++++.|++|+|||++++++..++.+|...|++++|+|+|++|+|++ |++|+|||++ |+++.++
T Consensus 521 ~~~~~~~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 521 SCVRFSP-NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp EEEEECS-CSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred EEEEEeC-CCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 9999974 43 4688889999999999999999999999999999999999999999999 9999999996 9999988
Q ss_pred ecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCC
Q 011452 357 EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGS 436 (485)
Q Consensus 357 ~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~ 436 (485)
..|. . |.+++|+||+.+|++++ |+.|+|||+.+++++.++..|... ++...+.
T Consensus 600 ~~~~-~-----v~~~~~sp~~~~l~~~~------------~~~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~----- 652 (694)
T 3dm0_A 600 EANS-V-----IHALCFSPNRYWLCAAT------------EHGIKIWDLESKSIVEDLKVDLKA----EAEKADN----- 652 (694)
T ss_dssp BCSS-C-----EEEEEECSSSSEEEEEE------------TTEEEEEETTTTEEEEEECCCCC-----------------
T ss_pred cCCC-c-----EEEEEEcCCCcEEEEEc------------CCCEEEEECCCCCChhhhcccccc----ccccccc-----
Confidence 7653 3 89999999999999876 478999999999999999876420 0000000
Q ss_pred ccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 437 CNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
..+ .......-.|++|+|||||+.|+|||.||+|+||++
T Consensus 653 ---~~~-------~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 653 ---SGP-------AATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp ------------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred ---ccc-------ccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 000 000001125899999999999999999999999985
No 51
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.3e-44 Score=409.75 Aligned_cols=321 Identities=14% Similarity=0.205 Sum_probs=276.0
Q ss_pred ccccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEE
Q 011452 93 RKRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (485)
Q Consensus 93 ~~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~ 170 (485)
.+...|..+.|+ +.++++++.||++++|+..+++++.++.+ |...|.+++|+|+|+.|+++|.+ +++
T Consensus 838 ~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~s~s~d----------g~v 906 (1249)
T 3sfz_A 838 GHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG-HLSWVHGVMFSPDGSSFLTASDD----------QTI 906 (1249)
T ss_dssp SSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT----------SCE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC-CccceEEEEECCCCCEEEEEeCC----------CeE
Confidence 356788888888 99999999999999999999999999887 88899999999999999998743 366
Q ss_pred EEeEeccC-----------------------------------------------------------Cc------Ccccc
Q 011452 171 RIEYIRRG-----------------------------------------------------------KP------DAGFA 185 (485)
Q Consensus 171 ~lw~i~~G-----------------------------------------------------------~~------~~~~~ 185 (485)
++|++..+ +. +....
T Consensus 907 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~ 986 (1249)
T 3sfz_A 907 RVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIK 986 (1249)
T ss_dssp EEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCE
T ss_pred EEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEE
Confidence 66664221 00 00001
Q ss_pred eee--------e--ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE-cCCcEEEEEEcCCceEEEEEcCC
Q 011452 186 LFE--------S--ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-SDKNVQEIKISPGIMLLIFTKAS 254 (485)
Q Consensus 186 lf~--------~--~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl-~~~~V~~VafSpg~~ll~sss~~ 254 (485)
+|. . .+...+..++|+ |+|++|++++.|++|++||+.+++++... +...|.+++|+|++.+++++
T Consensus 987 i~d~~~~~~~~~~~~h~~~v~~l~~s-~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~--- 1062 (1249)
T 3sfz_A 987 IIELPNNRVFSSGVGHKKAVRHIQFT-ADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWS--- 1062 (1249)
T ss_dssp EEETTTTSCEEECCCCSSCCCCEEEC-SSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEE---
T ss_pred EEEcCCCceeeecccCCCceEEEEEC-CCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE---
Confidence 111 0 234456689998 79999999999999999999999977544 35689999999999888764
Q ss_pred CCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcE
Q 011452 255 GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQL 334 (485)
Q Consensus 255 ~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~l 334 (485)
.|++|++||+.+|+++.++.+|...+..++|+ |++..+++++.|++|+|||+.+++++.++.+|...|.+++|+|||++
T Consensus 1063 ~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~ 1141 (1249)
T 3sfz_A 1063 FDGTVKVWNVITGRIERDFTCHQGTVLSCAIS-SDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGIL 1141 (1249)
T ss_dssp SSSEEEEEETTTTCCCEEEECCSSCCCCEEEC-SSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSE
T ss_pred CCCcEEEEECCCCceeEEEcccCCcEEEEEEC-CCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCE
Confidence 34899999999999999999999999999997 78889999999999999999999999999999999999999999999
Q ss_pred EEEEe-CCcEEEEeCC-CcEEEEe---------ecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEE
Q 011452 335 FLTFR-NRTVAVWNFR-GELVTSF---------EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINIS 403 (485)
Q Consensus 335 laS~s-D~TIklWd~~-G~ll~tl---------~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklW 403 (485)
||+++ |++|+|||+. |+++.++ .+|..+ |.+++|||||++|+++ +|+|++|
T Consensus 1142 lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~l~fs~dg~~l~s~-------------~g~v~vw 1203 (1249)
T 3sfz_A 1142 LATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGW-----VTDVCFSPDSKTLVSA-------------GGYLKWW 1203 (1249)
T ss_dssp EEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSC-----CCEEEECTTSSCEEEE-------------SSSEEEB
T ss_pred EEEEeCCCEEEEEECCCCceEEEeccccccccccccCce-----EEEEEECCCCCEEEEC-------------CCeEEEE
Confidence 99999 9999999996 9988776 678777 9999999999999987 3899999
Q ss_pred eCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEc
Q 011452 404 NILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVW 483 (485)
Q Consensus 404 dl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklW 483 (485)
|+.+|+++.++.+|.. .|++++|+|||+.|++|+.||+|++|
T Consensus 1204 d~~~g~~~~~~~~~~~--------------------------------------~i~~~~~s~dg~~l~~~~~dg~v~vw 1245 (1249)
T 3sfz_A 1204 NVATGDSSQTFYTNGT--------------------------------------NLKKIHVSPDFRTYVTVDNLGILYIL 1245 (1249)
T ss_dssp CSSSCBCCCCCCCSSC--------------------------------------CCCCCEECSSSCCEEEECTTCCEEEE
T ss_pred ECCCCceeeeeeccCC--------------------------------------cccEEEECCCCCEEEEecCCcEEEEE
Confidence 9999999999988862 78899999999999999999999999
Q ss_pred cC
Q 011452 484 SN 485 (485)
Q Consensus 484 d~ 485 (485)
++
T Consensus 1246 ~l 1247 (1249)
T 3sfz_A 1246 QV 1247 (1249)
T ss_dssp CC
T ss_pred ee
Confidence 85
No 52
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.6e-42 Score=372.56 Aligned_cols=291 Identities=12% Similarity=0.115 Sum_probs=247.8
Q ss_pred ccccccccccCCCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCC
Q 011452 70 IRLQEEYDTHDPKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNND 149 (485)
Q Consensus 70 ~~l~~~~~~~~~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~ 149 (485)
+.++..|..|..++.++.+.|. +++||+++.||+|++||..+|+.+.++.+ |...|++++|+|+|+
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~-------------~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~ 68 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPT-------------EPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKN 68 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSS-------------SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT
T ss_pred cccceeeecCCCceEEEEECCC-------------CCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCC
Confidence 4455667777776666666666 99999999999999999999999999987 888999999999999
Q ss_pred EEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCC-eEE
Q 011452 150 SLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY-TML 228 (485)
Q Consensus 150 ~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g-~~l 228 (485)
.||+++. | ++++||++.+|+... .+. .+...+..++|+ |+|+.|++++.|++|+|||+.++ .+.
T Consensus 69 ~l~~~~~----d------g~i~vw~~~~~~~~~---~~~-~~~~~v~~~~~s-~~~~~l~~~~~dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 69 WIIVGSD----D------FRIRVFNYNTGEKVV---DFE-AHPDYIRSIAVH-PTKPYVLSGSDDLTVKLWNWENNWALE 133 (814)
T ss_dssp EEEEEET----T------SEEEEEETTTCCEEE---EEE-CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEGGGTSEEE
T ss_pred EEEEEeC----C------CeEEEEECCCCcEEE---EEe-cCCCCEEEEEEe-CCCCEEEEEcCCCEEEEEECCCCceEE
Confidence 9999773 4 599999999888622 233 245667789998 79999999999999999999987 566
Q ss_pred EEEc--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEEeecCC-cceeEEEEEe-cCCCEEEEEeCCCcEE
Q 011452 229 YSIS--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL-HRNKKVDFIE-QFNEKLLVKQENENLQ 303 (485)
Q Consensus 229 ~tl~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~-~~~~~V~f~~-~~~~~lls~s~D~tIk 303 (485)
..+. ...|.+++|+| ++.++++++. |++|++||+.+++...++..+. ..+..++|++ +++..|++++.|++|+
T Consensus 134 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 211 (814)
T 3mkq_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCL--DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (814)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEE
T ss_pred EEEcCCCCcEEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEE
Confidence 6664 46899999999 7766666543 4899999999999988887554 7788999974 2677888899999999
Q ss_pred EEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCC--E
Q 011452 304 ILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD--L 379 (485)
Q Consensus 304 IWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~--~ 379 (485)
+||+++++++.++.+|...|.+++|+|+|++|++++ |++|++||+. ++++.++..|... ++.++|+|+|+ +
T Consensus 212 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~ 286 (814)
T 3mkq_A 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-----SWCIATHPTGRKNY 286 (814)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSS-----EEEEEECTTCGGGE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCc-----EEEEEEccCCCceE
Confidence 999999999999999999999999999999999999 9999999996 9999999999876 99999999998 5
Q ss_pred EEEEecCCCCCCCCcCCCCeEEEEeCCCC
Q 011452 380 IISYCKADSDDPLAEGNAGSINISNILTG 408 (485)
Q Consensus 380 LaS~s~d~~~d~~~~~~DgtIklWdl~TG 408 (485)
+++++ |+.+.+|++.++
T Consensus 287 ~~~~~------------~~~~~~~~~~~~ 303 (814)
T 3mkq_A 287 IASGF------------DNGFTVLSLGND 303 (814)
T ss_dssp EEEEE------------TTEEEEEECSCC
T ss_pred EEEEe------------CCCEEEEEcCCC
Confidence 77766 477889987653
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-41 Score=321.75 Aligned_cols=278 Identities=13% Similarity=0.180 Sum_probs=238.0
Q ss_pred cEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCC
Q 011452 126 QRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNG 205 (485)
Q Consensus 126 ~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG 205 (485)
+++.++.+ |...|++|+| |+++.||+++. | ++++||++..++.. ..+. .+...+..++|+ |+|
T Consensus 9 ~~~~~l~~-h~~~v~~~~~-~~~~~l~s~~~----d------g~v~vw~~~~~~~~---~~~~-~~~~~v~~~~~~-~~~ 71 (313)
T 3odt_A 9 QLSATLKG-HDQDVRDVVA-VDDSKVASVSR----D------GTVRLWSKDDQWLG---TVVY-TGQGFLNSVCYD-SEK 71 (313)
T ss_dssp EEEEEECC-CSSCEEEEEE-EETTEEEEEET----T------SEEEEEEESSSEEE---EEEE-ECSSCEEEEEEE-TTT
T ss_pred HHHHHhhC-CCCCcEEEEe-cCCCEEEEEEc----C------CcEEEEECCCCEEE---EEee-cCCccEEEEEEC-CCC
Confidence 67777877 8889999999 99999999774 3 59999999777652 2232 244567789998 799
Q ss_pred eEEEEeeCCCcEEEeecCCC---eEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcce
Q 011452 206 KVLTYSAQDSIYKVFDLKNY---TMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRN 280 (485)
Q Consensus 206 ~~Las~s~D~tiKlWdl~~g---~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~ 280 (485)
++|++++.|++|++|++.+. +++..+. ...|.+++|+ +..++++ + .|++|++|| .++.+..+..|...+
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~-~--~d~~i~~~d--~~~~~~~~~~~~~~v 145 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ-DGVVISG-S--WDKTAKVWK--EGSLVYNLQAHNASV 145 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE-TTEEEEE-E--TTSEEEEEE--TTEEEEEEECCSSCE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec-CCEEEEE-e--CCCCEEEEc--CCcEEEecccCCCce
Confidence 99999999999999998754 4566664 4689999994 4455554 2 358999999 789999999999999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc-CCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEee
Q 011452 281 KKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFE 357 (485)
Q Consensus 281 ~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g-h~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~ 357 (485)
..++|.++++..+++++.|++|++|| .+++...+.. |...+.+++|+|+++ |++++ |++|++||++ ++++.++.
T Consensus 146 ~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 146 WDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh
Confidence 99999977899999999999999999 5677777777 999999999999999 77888 9999999996 99999999
Q ss_pred cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCc
Q 011452 358 DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSC 437 (485)
Q Consensus 358 gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~ 437 (485)
+|... |.+++|+||| .|++++. ||+|+|||+.+++++.++..|..
T Consensus 223 ~~~~~-----i~~~~~~~~~-~l~~~~~-----------dg~v~iwd~~~~~~~~~~~~~~~------------------ 267 (313)
T 3odt_A 223 GHESF-----VYCIKLLPNG-DIVSCGE-----------DRTVRIWSKENGSLKQVITLPAI------------------ 267 (313)
T ss_dssp CCSSC-----EEEEEECTTS-CEEEEET-----------TSEEEEECTTTCCEEEEEECSSS------------------
T ss_pred cCCce-----EEEEEEecCC-CEEEEec-----------CCEEEEEECCCCceeEEEeccCc------------------
Confidence 99977 9999999999 5788876 79999999999999999999873
Q ss_pred cccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 438 NVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.|++++|+|||+ |++|+.||+|++||.
T Consensus 268 --------------------~i~~~~~~~~~~-~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 268 --------------------SIWSVDCMSNGD-IIVGSSDNLVRIFSQ 294 (313)
T ss_dssp --------------------CEEEEEECTTSC-EEEEETTSCEEEEES
T ss_pred --------------------eEEEEEEccCCC-EEEEeCCCcEEEEeC
Confidence 899999999999 667999999999984
No 54
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.8e-42 Score=355.51 Aligned_cols=346 Identities=12% Similarity=0.070 Sum_probs=274.6
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccC----cEEEEeecCCccc-EEEEEEee--CCCEEEEEEeecCCCCcc
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETN----QRICFLNVTADEV-IRSLFYNK--NNDSLITVSVYASDNFSS 164 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG----~~l~tl~g~~~~~-i~sv~~sp--dg~~Las~S~d~~~d~st 164 (485)
++..|..++|+ +++||+++ ++.+++|+++++ +++.++.+ |... |.+++|+| ||+.||+++. |
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~~l~s~~~----d--- 87 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQYLCSGDE----S--- 87 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCCEEEEEET----T---
T ss_pred ccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCCEEEEecC----C---
Confidence 55667777777 89999998 899999999999 89998987 8888 99999999 9999999774 4
Q ss_pred cceeEEEEeEeccC------CcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC----CcEEEeecCCCeEEEEEc--
Q 011452 165 LRCRSTRIEYIRRG------KPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKNYTMLYSIS-- 232 (485)
Q Consensus 165 L~~~t~~lw~i~~G------~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D----~tiKlWdl~~g~~l~tl~-- 232 (485)
++++||++.+| +... ...+. .+...+..++|+ |+|++|++++.| +.|++|| +++++.++.
T Consensus 88 ---g~v~vw~~~~~~~~~~~~~~~-~~~~~-~~~~~v~~~~~s-~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~ 159 (615)
T 1pgu_A 88 ---GKVIVWGWTFDKESNSVEVNV-KSEFQ-VLAGPISDISWD-FEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGH 159 (615)
T ss_dssp ---SEEEEEEEEEEGGGTEEEEEE-EEEEE-CCSSCEEEEEEC-TTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSC
T ss_pred ---CEEEEEeCCCCcccccccccc-cchhh-cccccEEEEEEe-CCCCEEEEeccCCCCccEEEEEE--CCCcceeeecC
Confidence 59999999766 2110 11222 234567789998 799999999988 6899998 667777775
Q ss_pred CCcEEEEEEcCCce-EEEEEcCCCCeeEEEEecCCCeEEEEeecCCc---ceeEEEEEecC-CCEEEEEeCCCcEEEEEC
Q 011452 233 DKNVQEIKISPGIM-LLIFTKASGHVPLKILSIEDGTVLKSFNHLLH---RNKKVDFIEQF-NEKLLVKQENENLQILDV 307 (485)
Q Consensus 233 ~~~V~~VafSpg~~-ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~---~~~~V~f~~~~-~~~lls~s~D~tIkIWDv 307 (485)
...|.+++|+|++. ++++++ .|++|++||+++++++.++.+|.. .+..++|+ |+ +..|++++.|++|++||+
T Consensus 160 ~~~v~~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 160 SQRINACHLKQSRPMRSMTVG--DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS-PDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp SSCEEEEEECSSSSCEEEEEE--TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC-STTCCEEEEEETTCCEEEEET
T ss_pred CccEEEEEECCCCCcEEEEEe--CCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC-CCCCCEEEEEeCCCeEEEEEC
Confidence 45899999999764 444444 458999999999999999999988 89999997 66 788899999999999999
Q ss_pred CCCeeEEec-c---cCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEE
Q 011452 308 RNFELTEVS-R---TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (485)
Q Consensus 308 ~tg~~~~~l-~---gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~La 381 (485)
++++++..+ . +|...|.+++|+ ++++|++++ |++|++||++ ++++.++..|...+.. .+..+.|+ ++++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~l~ 313 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN-QQVGVVAT-GNGRII 313 (615)
T ss_dssp TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGG-CEEEEEEE-ETTEEE
T ss_pred CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccC-ceeEEEeC-CCCeEE
Confidence 999999998 6 899999999999 999999999 9999999996 9999999988422111 27788885 999999
Q ss_pred EEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccc-----cCCCCCCCCccccccccccccccchhccc
Q 011452 382 SYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECS-----CSGDYSSGSCNVKKHSHASRIRSTVAEAL 456 (485)
Q Consensus 382 S~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 456 (485)
+++. |++|++||+.+++++.++.+|.+ +....+. .+.++....|+... +. ..+.
T Consensus 314 ~~~~-----------~g~i~~~d~~~~~~~~~~~~~~~-~v~~~~~~~l~~~~~dg~i~~w~~~~------~~---~~~~ 372 (615)
T 1pgu_A 314 SLSL-----------DGTLNFYELGHDEVLKTISGHNK-GITALTVNPLISGSYDGRIMEWSSSS------MH---QDHS 372 (615)
T ss_dssp EEET-----------TSCEEEEETTEEEEEEEECCCSS-CEEEEETTTTEEEETTSCEEETTTTE------EE---CCCC
T ss_pred EEEC-----------CCCEEEEECCCCcEEEEEeCCCC-CEEEEEecCcEEECCCCeEEEEEchh------hc---Cccc
Confidence 9987 79999999999999999999974 2222222 22222222222210 00 1223
Q ss_pred CCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 457 EDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 457 ~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
..|++++| ++++.|++++.|++|++|+
T Consensus 373 ~~v~~~~~-~~~~~l~~~~~d~~i~~~~ 399 (615)
T 1pgu_A 373 NLIVSLDN-SKAQEYSSISWDDTLKVNG 399 (615)
T ss_dssp SCEEEEEC-CSTTCCEEEETTTEEEETT
T ss_pred CceEEEEE-CCCcEEEEEeCCCCEEEEE
Confidence 47888888 6678888999999999997
No 55
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=336.20 Aligned_cols=293 Identities=14% Similarity=0.149 Sum_probs=236.1
Q ss_pred cEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC-
Q 011452 126 QRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN- 204 (485)
Q Consensus 126 ~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn- 204 (485)
+.+..+..+|...|.+|+|+|+|+.|++++.....| ++++||++..+++. .+...++...+..++|+ |+
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d------~~v~iw~~~~~~~~---~~~~~~~~~~v~~~~~~-~~~ 77 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGT------GVIQLYEIQHGDLK---LLREIEKAKPIKCGTFG-ATS 77 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCC------EEEEEEEECSSSEE---EEEEEEESSCEEEEECT-TCC
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCC------cEEEEEeCCCCccc---ceeeecccCcEEEEEEc-CCC
Confidence 344444445999999999999997776544211125 79999999888762 23333445567789998 56
Q ss_pred --CeEEEEeeCCCcEEEeecCCCe-EEEEEc--CCcEEEEE------EcCCceEEEEEcCCCCeeEEEEecCCCe-EEEE
Q 011452 205 --GKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKNVQEIK------ISPGIMLLIFTKASGHVPLKILSIEDGT-VLKS 272 (485)
Q Consensus 205 --G~~Las~s~D~tiKlWdl~~g~-~l~tl~--~~~V~~Va------fSpg~~ll~sss~~~D~tIklWdi~tG~-~L~t 272 (485)
|++|++++.|++|++||+.+++ ++.++. ...|.+++ |+|++.++++++. |++|++||+++++ ++.+
T Consensus 78 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~ 155 (357)
T 3i2n_A 78 LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR--DGTVKVWDPRQKDDPVAN 155 (357)
T ss_dssp TTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET--TSCEEEECTTSCSSCSEE
T ss_pred CCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC--CCeEEEEeCCCCCCccee
Confidence 7999999999999999999988 777775 45799995 5676666666543 5899999999998 7888
Q ss_pred eecCCc----ceeEEEEEe---cCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcC---CCcEEEEEe-CC
Q 011452 273 FNHLLH----RNKKVDFIE---QFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLY---ENQLFLTFR-NR 341 (485)
Q Consensus 273 l~~~~~----~~~~V~f~~---~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFsp---dg~llaS~s-D~ 341 (485)
+..|.+ .+.+++|.. +++..+++++.|++|++||+++++++.. ..|...|.+++|+| ++++|++++ |+
T Consensus 156 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 156 MEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp ECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred ccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 876655 677888632 6788899999999999999999998655 57888999999999 999999999 99
Q ss_pred cEEEEeCC-CcEEEEee-----cCCCCCCCCCeeEEEECCCCC-EEEEEecCCCCCCCCcCCCCeEEEEeCCCC------
Q 011452 342 TVAVWNFR-GELVTSFE-----DHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNAGSINISNILTG------ 408 (485)
Q Consensus 342 TIklWd~~-G~ll~tl~-----gH~~~~~~~~v~svafSpDG~-~LaS~s~d~~~d~~~~~~DgtIklWdl~TG------ 408 (485)
+|++||++ ++++..+. +|... |.+++|+|+|+ +|++++. ||+|+|||+.++
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKST-----VWQVRHLPQNRELFLTAGG-----------AGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSC-----EEEEEEETTEEEEEEEEET-----------TSEEEEEEEECCSCC--C
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCC-----EEEEEECCCCCcEEEEEeC-----------CCcEEEeecCCCcccccc
Confidence 99999996 66554444 89877 99999999999 8999987 799999999864
Q ss_pred -------------eEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEE-Ee
Q 011452 409 -------------KCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIY-TG 474 (485)
Q Consensus 409 -------------k~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~La-Sg 474 (485)
+++.++.+|.. .|++++|+|||+.|+ ||
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~--------------------------------------~v~~~~~s~~~~~l~~s~ 340 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVTLSTQ--------------------------------------PISSLDWSPDKRGLCVCS 340 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEECCSS--------------------------------------CEEEEEECSSSTTEEEEE
T ss_pred cCCCCccccccccceeeccccCCC--------------------------------------CeeEEEEcCCCCeEEEEe
Confidence 57888888862 899999999999998 89
Q ss_pred cCCCcEEEccC
Q 011452 475 NRHGLVHVWSN 485 (485)
Q Consensus 475 s~DgtVklWd~ 485 (485)
+.|++|+|||.
T Consensus 341 ~~d~~i~iw~~ 351 (357)
T 3i2n_A 341 SFDQTVRVLIV 351 (357)
T ss_dssp ETTSEEEEEEE
T ss_pred cCCCcEEEEEC
Confidence 99999999983
No 56
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-42 Score=335.96 Aligned_cols=289 Identities=11% Similarity=0.152 Sum_probs=238.3
Q ss_pred EEeecCCcccEEEEEEeeC---CC-EEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceEEEEeCC
Q 011452 129 CFLNVTADEVIRSLFYNKN---ND-SLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGFVEFDDV 203 (485)
Q Consensus 129 ~tl~g~~~~~i~sv~~spd---g~-~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~p 203 (485)
..+..+|...|.+|+|+|+ ++ .+++++ +++ .++||++.+++.......+.. .+...+..++|+ |
T Consensus 11 ~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~---~~~-------~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~ 79 (366)
T 3k26_A 11 NSLKEDHNQPLFGVQFNWHSKEGDPLVFATV---GSN-------RVTLYECHSQGEIRLLQSYVDADADENFYTCAWT-Y 79 (366)
T ss_dssp EEEECTTCSCEEEEEECTTCCTTSCEEEEEE---ETT-------EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEE-E
T ss_pred EEeecCCCCceEEEEEecccCCCCceEEEEC---CCC-------EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEec-c
Confidence 3455569999999999984 54 333322 244 899999987776321111211 123446689998 6
Q ss_pred C----CeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEEe---
Q 011452 204 N----GKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSF--- 273 (485)
Q Consensus 204 n----G~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~tl--- 273 (485)
+ |++|++++.|++|+|||+.+++++.++. ...|.+++|+| ++.++++++. |++|+|||+++++++..+
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK--DHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET--TSCEEEEETTTTEEEEEECST
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC--CCeEEEEEeecCeEEEEeccc
Confidence 7 7899999999999999999999998886 45899999999 7776666553 589999999999999999
Q ss_pred ecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc----------------------------CCCceEE
Q 011452 274 NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT----------------------------EFMTPSA 325 (485)
Q Consensus 274 ~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g----------------------------h~~~v~a 325 (485)
.+|...+..++|+ |++..|++++.|++|++||+++++++..+.. |...|.+
T Consensus 158 ~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 158 EGHRDEVLSADYD-LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred ccccCceeEEEEC-CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 6888999999997 6788999999999999999999877655544 9999999
Q ss_pred EEEcCCCcEEEEEe-CCcEEEEeCC-Cc--------------EEEEeecCCCCCCCCCeeEEEECCC--CCEEEEEecCC
Q 011452 326 FIFLYENQLFLTFR-NRTVAVWNFR-GE--------------LVTSFEDHLLWHPDCNTNNIYITSD--QDLIISYCKAD 387 (485)
Q Consensus 326 vaFspdg~llaS~s-D~TIklWd~~-G~--------------ll~tl~gH~~~~~~~~v~svafSpD--G~~LaS~s~d~ 387 (485)
++|+ +++|++++ |++|++||+. ++ ++.++.+|... |+.++|+|| |++|++++.
T Consensus 237 ~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~~~l~~~~~-- 307 (366)
T 3k26_A 237 VRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD-----IWYMRFSMDFWQKMLALGNQ-- 307 (366)
T ss_dssp EEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC-----SSCCCCEECTTSSEEEEECT--
T ss_pred EEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc-----EEEEEEcCCCCCcEEEEEec--
Confidence 9999 77999999 9999999985 54 48899999877 899999999 999999986
Q ss_pred CCCCCCcCCCCeEEEEeCCCCe----EEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEE
Q 011452 388 SDDPLAEGNAGSINISNILTGK----CLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALF 463 (485)
Q Consensus 388 ~~d~~~~~~DgtIklWdl~TGk----~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~ 463 (485)
||+|+|||+.+++ .+.++.+|.. . ..|++|+
T Consensus 308 ---------dg~i~vwd~~~~~~~~~~~~~~~~~~~-------------------------~-----------~~v~~~~ 342 (366)
T 3k26_A 308 ---------VGKLYVWDLEVEDPHKAKCTTLTHHKC-------------------------G-----------AAIRQTS 342 (366)
T ss_dssp ---------TSCEEEEECCSSSGGGCEEEEECCTTC-------------------------C-----------SCEEEEE
T ss_pred ---------CCcEEEEECCCCCCccccceEEccccc-------------------------C-----------CceEEEE
Confidence 7999999999986 4558888841 0 2899999
Q ss_pred EcCCCCEEEEecCCCcEEEccC
Q 011452 464 YDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 464 fspDg~~LaSgs~DgtVklWd~ 485 (485)
|+|||+.|++|+.||+|+|||+
T Consensus 343 ~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 343 FSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC
T ss_pred eCCCCCeEEEEeCCCEEEEEEe
Confidence 9999999999999999999985
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-42 Score=336.03 Aligned_cols=300 Identities=16% Similarity=0.155 Sum_probs=240.2
Q ss_pred CCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCC-EEEEEEeecCCCCcccceeEEEEeEe----ccCCcCcc---cc
Q 011452 114 SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNND-SLITVSVYASDNFSSLRCRSTRIEYI----RRGKPDAG---FA 185 (485)
Q Consensus 114 dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~-~Las~S~d~~~d~stL~~~t~~lw~i----~~G~~~~~---~~ 185 (485)
...+.+|+.+.......... |...|.+++|+|+|+ +||+++. | ++++||++ ..|+.... ..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~~~~~----d------g~i~iw~~~~~~~~~~~~~~~~~~~ 92 (425)
T 1r5m_A 24 NSIDSSDDLDGFVKILKEIV-KLDNIVSSTWNPLDESILAYGEK----N------SVARLARIVETDQEGKKYWKLTIIA 92 (425)
T ss_dssp ----------CCCEECEEEE-ECSCCSEEEECSSCTTEEEEEET----B------TEEEEEEEEEC------CEEEEEEE
T ss_pred ccccccccchhhhhheeeee-ccCceEEEEECCCCCcEEEEecC----C------ceEEEEEEecccCCccccccccccc
Confidence 34556777654443332222 557899999999999 9999774 3 49999999 88872000 01
Q ss_pred eeee---------ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCC
Q 011452 186 LFES---------ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKAS 254 (485)
Q Consensus 186 lf~~---------~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~ 254 (485)
.+.. .+...+..++|+ |+|++|++++.|++|+||| .+++++..+. ...|.+++|+|++.++++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-- 168 (425)
T 1r5m_A 93 ELRHPFALSASSGKTTNQVTCLAWS-HDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMD-- 168 (425)
T ss_dssp EEECCCCCC------CBCEEEEEEC-TTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEE--
T ss_pred cccccccccccccCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEe--
Confidence 1111 023356789998 7999999999999999999 6788888886 45899999999776655554
Q ss_pred CCeeEEEEecCCCeEEEEeecCCcc---------------eeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccC
Q 011452 255 GHVPLKILSIEDGTVLKSFNHLLHR---------------NKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTE 319 (485)
Q Consensus 255 ~D~tIklWdi~tG~~L~tl~~~~~~---------------~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh 319 (485)
.|++|++||+++|+++..+..+... +..++|++ ++.+++++.|++|++||+++++++..+.+|
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 246 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD--DDKFVIPGPKGAIFVYQITEKTPTGKLIGH 246 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE--TTEEEEECGGGCEEEEETTCSSCSEEECCC
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC--CCEEEEEcCCCeEEEEEcCCCceeeeeccC
Confidence 3589999999999999999987766 88999974 578999999999999999999999999999
Q ss_pred CCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCC
Q 011452 320 FMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNA 397 (485)
Q Consensus 320 ~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~D 397 (485)
...|.+++|+|++++|++++ |++|++||++ ++++.++.+|... |.+++|+||| +|++++. |
T Consensus 247 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----i~~~~~~~~~-~l~~~~~-----------d 309 (425)
T 1r5m_A 247 HGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQS-----IVSASWVGDD-KVISCSM-----------D 309 (425)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSC-----EEEEEEETTT-EEEEEET-----------T
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCcc-----EEEEEECCCC-EEEEEeC-----------C
Confidence 99999999999999999999 9999999996 9999999999877 9999999999 9999986 7
Q ss_pred CeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCC
Q 011452 398 GSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRH 477 (485)
Q Consensus 398 gtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~D 477 (485)
++|+|||+.+++++.++.+|.. .|++++|+|||+.|++|+.|
T Consensus 310 ~~i~i~d~~~~~~~~~~~~~~~--------------------------------------~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLALSIVDGV--------------------------------------PIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp SEEEEEETTTTEEEEEEECTTC--------------------------------------CEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEECCCCcEeEecccCCc--------------------------------------cEEEEEEcCCCCEEEEEECC
Confidence 9999999999999999999873 89999999999999999999
Q ss_pred CcEEEccC
Q 011452 478 GLVHVWSN 485 (485)
Q Consensus 478 gtVklWd~ 485 (485)
|+|+|||.
T Consensus 352 g~i~i~~~ 359 (425)
T 1r5m_A 352 GQVNVYDL 359 (425)
T ss_dssp SCEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.9e-42 Score=338.44 Aligned_cols=299 Identities=9% Similarity=0.011 Sum_probs=241.0
Q ss_pred EEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCccc---ceeeeccccCceEEEEeCCC-
Q 011452 129 CFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF---ALFESESLKWPGFVEFDDVN- 204 (485)
Q Consensus 129 ~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~---~lf~~~~~~~~~~V~Fs~pn- 204 (485)
.++.+ |...|.+|+|+| +.||+++. | ++++||++..++..... ..+. .+...+..++|+ |+
T Consensus 10 ~~~~~-h~~~i~~~~~~~--~~l~s~~~----d------g~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-~~~ 74 (397)
T 1sq9_A 10 NAGKA-HDADIFSVSACN--SFTVSCSG----D------GYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVL-QAI 74 (397)
T ss_dssp EESSC-SSSCEEEEEECS--SEEEEEET----T------SEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEE-EEE
T ss_pred hhhhh-hhcCeEEEEecC--CeEEEEcC----C------CEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEe-ccc
Confidence 34555 889999999999 78999774 3 59999999888721111 1122 344567789998 68
Q ss_pred ---C---eEEEEeeCCCcEEEeecCCCeE-----EEEEc-------CCcEEEEEEc----CCceE-EEEEcCCCCeeEEE
Q 011452 205 ---G---KVLTYSAQDSIYKVFDLKNYTM-----LYSIS-------DKNVQEIKIS----PGIML-LIFTKASGHVPLKI 261 (485)
Q Consensus 205 ---G---~~Las~s~D~tiKlWdl~~g~~-----l~tl~-------~~~V~~VafS----pg~~l-l~sss~~~D~tIkl 261 (485)
| ++|++++.|++|+|||+.++++ +..+. ...|.+++|+ |++.+ +++++ .|++|++
T Consensus 75 ~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--~dg~i~i 152 (397)
T 1sq9_A 75 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD--VKGTTYI 152 (397)
T ss_dssp ETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE--TTSCEEE
T ss_pred ccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe--CCCcEEE
Confidence 9 9999999999999999998886 77764 2679999999 86665 55554 3489999
Q ss_pred EecCC------CeEEE-----Eeec-------CCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc---C-
Q 011452 262 LSIED------GTVLK-----SFNH-------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT---E- 319 (485)
Q Consensus 262 Wdi~t------G~~L~-----tl~~-------~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g---h- 319 (485)
||+.+ ++++. ++.+ |...+..++|+ |++ .+++++.|++|+|||+++++++..+.+ |
T Consensus 153 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~ 230 (397)
T 1sq9_A 153 WKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS-ERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMI 230 (397)
T ss_dssp EEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC-TTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---
T ss_pred EeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEEC-CCc-eEEEEeCCCcEEEEECCCCceeEEEecccccc
Confidence 99999 88887 8854 77889999997 567 888889999999999999999999998 9
Q ss_pred --CCceEEEEEcCCCcEEEEEe-C---CcEEEEeCC-CcEEEEeec-------------CCCCCCCCCeeEEEECCCCCE
Q 011452 320 --FMTPSAFIFLYENQLFLTFR-N---RTVAVWNFR-GELVTSFED-------------HLLWHPDCNTNNIYITSDQDL 379 (485)
Q Consensus 320 --~~~v~avaFspdg~llaS~s-D---~TIklWd~~-G~ll~tl~g-------------H~~~~~~~~v~svafSpDG~~ 379 (485)
...|.+++|+|++++|++++ | ++|++||++ ++++.++.+ |... |.+++|+|||++
T Consensus 231 ~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~ 305 (397)
T 1sq9_A 231 NNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-----VMSLSFNDSGET 305 (397)
T ss_dssp CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-----EEEEEECSSSSE
T ss_pred ccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc-----EEEEEECCCCCE
Confidence 99999999999999999999 9 999999996 999999999 8877 999999999999
Q ss_pred EEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEec------CCCCCCCCcccccCCCCCCCCccccccccccccccchh
Q 011452 380 IISYCKADSDDPLAEGNAGSINISNILTGKCLAKIR------ASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVA 453 (485)
Q Consensus 380 LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~------gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (485)
|++++. |++|+|||+.+++++.++. +|.. . ...+. .|. ..
T Consensus 306 l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~------~-~~~g~--------~~~--------~~ 351 (397)
T 1sq9_A 306 LCSAGW-----------DGKLRFWDVKTKERITTLNMHCDDIEIEE------D-ILAVD--------EHG--------DS 351 (397)
T ss_dssp EEEEET-----------TSEEEEEETTTTEEEEEEECCGGGCSSGG------G-CCCBC--------TTS--------CB
T ss_pred EEEEeC-----------CCeEEEEEcCCCceeEEEecccCcccchh------h-hhccc--------ccc--------cc
Confidence 999997 7999999999999999999 7610 0 00000 000 00
Q ss_pred cccCCeEEEEEcCCC----------CEEEEecCCCcEEEccC
Q 011452 454 EALEDITALFYDEDR----------NEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 454 ~~l~~V~sl~fspDg----------~~LaSgs~DgtVklWd~ 485 (485)
.+...|++++|+||| +.|+||+.||+|+||++
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred ccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 001389999999999 79999999999999983
No 59
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=323.45 Aligned_cols=275 Identities=11% Similarity=0.078 Sum_probs=223.5
Q ss_pred EEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceEEEEeCCCCeEEEEeeCCCcE
Q 011452 139 IRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIY 217 (485)
Q Consensus 139 i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~D~ti 217 (485)
.+.|+|||+| .||++. | ++|+|||+.+|++.. +++. ++..++.+|+|+ |+|++||+|+.|++|
T Consensus 28 ~~~l~WS~~~-~lAvg~----D-------~tV~iWd~~tg~~~~---~~~~~~~~~~V~~v~~~-~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL----D-------NSVYLWSASSGDILQ---LLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEV 91 (318)
T ss_dssp CBCEEECTTS-EEEEEE----T-------TEEEEEETTTCCEEE---EEECCSTTCCEEEEEEC-TTSSEEEEEETTSEE
T ss_pred ceEEEECCCC-EEEEEe----C-------CEEEEEECCCCCEEE---EEEecCCCCeEEEEEEC-CCCCEEEEEECCCcE
Confidence 4679999987 666533 3 499999999998732 4432 355667899998 799999999999999
Q ss_pred EEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCC-eEEEEeecCCcceeEEEEEecCCCEEEEE
Q 011452 218 KVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDG-TVLKSFNHLLHRNKKVDFIEQFNEKLLVK 296 (485)
Q Consensus 218 KlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG-~~L~tl~~~~~~~~~V~f~~~~~~~lls~ 296 (485)
+|||+++++++.++.++......+++.+.++++++ .++.+++|+..++ ..+.++.+|...+..++|. +++..++++
T Consensus 92 ~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~ 168 (318)
T 4ggc_A 92 QLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGS--RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA-PDGRHLASG 168 (318)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEE--TTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEEEEE
T ss_pred EEeecCCceeEEEecCccceEEEeecCCCEEEEEe--cCCceEeeecCCCceeEEEEcCccCceEEEEEc-CCCCEEEEE
Confidence 99999999999998765444444554334444444 3479999998876 4568889999999999986 678889999
Q ss_pred eCCCcEEEEECCCCee----EEecccCCCceEEEEEcCCCcEE---EEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCC
Q 011452 297 QENENLQILDVRNFEL----TEVSRTEFMTPSAFIFLYENQLF---LTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCN 367 (485)
Q Consensus 297 s~D~tIkIWDv~tg~~----~~~l~gh~~~v~avaFspdg~ll---aS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~ 367 (485)
+.|++|+|||+++++. ......|...|.+++++|++..+ ++++ |++|+|||.+ ++...... |...
T Consensus 169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~----- 242 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQ----- 242 (318)
T ss_dssp ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSC-----
T ss_pred ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceee-----
Confidence 9999999999998764 44556788899999999977643 3556 9999999997 66665554 4434
Q ss_pred eeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccc
Q 011452 368 TNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASR 447 (485)
Q Consensus 368 v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (485)
+..++|+|+++.+++++. +.|++|+|||+.+|+++++|++|.+
T Consensus 243 v~~~~~~~~~~~~~~~sg---------~~d~~i~iwd~~~~~~~~~l~gH~~---------------------------- 285 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHG---------FAQNQLVIWKYPTMAKVAELKGHTS---------------------------- 285 (318)
T ss_dssp EEEEEEETTTTEEEEEEC---------TTTCCEEEEETTTCCEEEEECCCSS----------------------------
T ss_pred eeeeeecccccceEEEEE---------cCCCEEEEEECCCCcEEEEEcCCCC----------------------------
Confidence 899999999999998763 3489999999999999999999983
Q ss_pred cccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 448 IRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 448 ~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.|++|+|+|||+.|||||.||+|||||+
T Consensus 286 ----------~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 286 ----------RVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp ----------CEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ----------CEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 8999999999999999999999999985
No 60
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.5e-43 Score=358.54 Aligned_cols=301 Identities=12% Similarity=0.090 Sum_probs=235.8
Q ss_pred EEeecCCcccEEEEEEee-CCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceee-eccccCceEEEEeCCCCe
Q 011452 129 CFLNVTADEVIRSLFYNK-NNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFE-SESLKWPGFVEFDDVNGK 206 (485)
Q Consensus 129 ~tl~g~~~~~i~sv~~sp-dg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~-~~~~~~~~~V~Fs~pnG~ 206 (485)
.+..+ |+..|.+|+|+| ++.+||++|. | ++|+||++..++... ++. .+|...+..|+|+|.||.
T Consensus 113 ~~~~~-~~~~V~~l~~~P~~~~~lasGs~----d------g~i~lWd~~~~~~~~---~~~~~gH~~~V~~l~f~p~~~~ 178 (435)
T 4e54_B 113 QKAAP-FDRRATSLAWHPTHPSTVAVGSK----G------GDIMLWNFGIKDKPT---FIKGIGAGGSITGLKFNPLNTN 178 (435)
T ss_dssp CEEEE-CSSCEEEEEECSSCTTCEEEEET----T------SCEEEECSSCCSCCE---EECCCSSSCCCCEEEECSSCTT
T ss_pred ccCCC-CCCCEEEEEEeCCCCCEEEEEeC----C------CEEEEEECCCCCcee---EEEccCCCCCEEEEEEeCCCCC
Confidence 34445 788899999999 5678988774 4 599999998776522 222 135567889999855899
Q ss_pred EEEEeeCCCcEEEeecCCCeEEEEEcC----CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeE
Q 011452 207 VLTYSAQDSIYKVFDLKNYTMLYSISD----KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKK 282 (485)
Q Consensus 207 ~Las~s~D~tiKlWdl~~g~~l~tl~~----~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~ 282 (485)
+|+++|.|++|||||++++.+...... ..|.+++|+|++.++++++ .|++|+|||++ |+++.++.+|...+.+
T Consensus 179 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~--~dg~i~~wd~~-~~~~~~~~~h~~~v~~ 255 (435)
T 4e54_B 179 QFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD--NVGNVILLNMD-GKELWNLRMHKKKVTH 255 (435)
T ss_dssp EEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC--SSSBEEEEESS-SCBCCCSBCCSSCEEE
T ss_pred EEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe--CCCcEeeeccC-cceeEEEecccceEEe
Confidence 999999999999999987665433332 3578999999777766654 45899999984 6788999999999999
Q ss_pred EEEEecCCC-EEEEEeCCCcEEEEECCCCeeEEe---cccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEe
Q 011452 283 VDFIEQFNE-KLLVKQENENLQILDVRNFELTEV---SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF 356 (485)
Q Consensus 283 V~f~~~~~~-~lls~s~D~tIkIWDv~tg~~~~~---l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl 356 (485)
|+|+ |++. .+++++.|++|+|||+++++.... ..+|...|++++|+|||++|+|++ |++|+|||+. +++...+
T Consensus 256 v~~~-p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 256 VALN-PCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp EEEC-TTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred eeec-CCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 9997 5555 566788999999999998775443 368999999999999999999999 9999999996 9999999
Q ss_pred ecCCCCCCC-CCeeEEEECCCCCEEEEEecCCCCC-CCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCC
Q 011452 357 EDHLLWHPD-CNTNNIYITSDQDLIISYCKADSDD-PLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSS 434 (485)
Q Consensus 357 ~gH~~~~~~-~~v~svafSpDG~~LaS~s~d~~~d-~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~ 434 (485)
.+|...+.. ..+....|+|++.++++++.++..- ......+++|+|||+.+|+++.++.++..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~--------------- 399 (435)
T 4e54_B 335 IPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPES--------------- 399 (435)
T ss_dssp CCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSC---------------
T ss_pred ecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCC---------------
Confidence 888753221 1234578899999998887543222 22233567999999999999999875431
Q ss_pred CCccccccccccccccchhcccCCeEEE-EEcCCCCEEEEecCCCcEEEccC
Q 011452 435 GSCNVKKHSHASRIRSTVAEALEDITAL-FYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~l~~V~sl-~fspDg~~LaSgs~DgtVklWd~ 485 (485)
..|.++ +|+|||++||||+ |++|+||+.
T Consensus 400 ----------------------~~v~s~~~fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 400 ----------------------SGISSLNEFNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp ----------------------CCCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred ----------------------CcEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence 267776 7999999999997 889999984
No 61
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-43 Score=347.44 Aligned_cols=283 Identities=10% Similarity=0.084 Sum_probs=237.1
Q ss_pred cEEEEEEeeCCC-EEEEEEeec------CCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEE
Q 011452 138 VIRSLFYNKNND-SLITVSVYA------SDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTY 210 (485)
Q Consensus 138 ~i~sv~~spdg~-~Las~S~d~------~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las 210 (485)
.|.+++|+|+|+ .||+++..+ +.| ++++||++..++...-...+. +...+..++|+ |+|++|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d------~~v~iw~~~~~~~~~~~~~~~--~~~~v~~~~~s-~~~~~l~~ 84 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTD------SSLELWSLLAADSEKPIASLQ--VDSKFNDLDWS-HNNKIIAG 84 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCC------CCCEEEESSSGGGCSCSCCCC--CSSCEEEEEEC-SSSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCC------CeEEEEEccCCCCCcEEEEEe--cCCceEEEEEC-CCCCeEEE
Confidence 578899999998 888874444 455 799999998775321112222 34456789998 79999999
Q ss_pred eeCCCcEEEeecCC----CeEEEEEc--CCcEEEEEEcCC-ceEEEEEcCCCCeeEEEEecCCCe------EEE---Eee
Q 011452 211 SAQDSIYKVFDLKN----YTMLYSIS--DKNVQEIKISPG-IMLLIFTKASGHVPLKILSIEDGT------VLK---SFN 274 (485)
Q Consensus 211 ~s~D~tiKlWdl~~----g~~l~tl~--~~~V~~VafSpg-~~ll~sss~~~D~tIklWdi~tG~------~L~---tl~ 274 (485)
++.|++|+|||+.+ .+++.++. ...|.+++|+|+ +.++++++ .|++|+|||+.+++ ... .+.
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG--NNGEIFIWDMNKCTESPSNYTPLTPGQSM 162 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEEC--SSSCEEBCBTTTTSSCTTTCCCBCCCCSC
T ss_pred EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEc--CCCeEEEEECCCCcccccccccccccccc
Confidence 99999999999987 35777775 458999999985 66655544 45899999999997 333 346
Q ss_pred cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccC------CCceEEEEEcCCC-cEEEEEe-CC---cE
Q 011452 275 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTE------FMTPSAFIFLYEN-QLFLTFR-NR---TV 343 (485)
Q Consensus 275 ~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh------~~~v~avaFspdg-~llaS~s-D~---TI 343 (485)
+|...+..++|++..+..+++++.|++|+|||+++++++..+..| ...|.+++|+|++ ++|++++ |+ +|
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 788899999997432677888899999999999999999998776 7899999999997 6899999 88 99
Q ss_pred EEEeCC-C-cEEEEee-cCCCCCCCCCeeEEEECC-CCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCC
Q 011452 344 AVWNFR-G-ELVTSFE-DHLLWHPDCNTNNIYITS-DQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNG 419 (485)
Q Consensus 344 klWd~~-G-~ll~tl~-gH~~~~~~~~v~svafSp-DG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~ 419 (485)
++||++ + +++.++. +|... |.+++|+| |+++|++++. |++|+|||+.+++++.++.+|.+
T Consensus 243 ~~~d~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~~l~s~~~-----------dg~v~~wd~~~~~~~~~~~~~~~ 306 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQGHQKG-----ILSLDWCHQDEHLLLSSGR-----------DNTVLLWNPESAEQLSQFPARGN 306 (416)
T ss_dssp CEEETTSTTSCSBCCCSCCSSC-----EEEEEECSSCSSCEEEEES-----------SSEEEEECSSSCCEEEEEECSSS
T ss_pred EEEeCCCCCCCcEEeecCccCc-----eeEEEeCCCCCCeEEEEeC-----------CCCEEEeeCCCCccceeecCCCC
Confidence 999996 4 7888898 99877 99999999 9999999997 79999999999999999999973
Q ss_pred CCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCC-CEEEEecCCCcEEEccC
Q 011452 420 LPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDR-NEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg-~~LaSgs~DgtVklWd~ 485 (485)
.|++++|+||+ +.|++|+.|++|+||++
T Consensus 307 --------------------------------------~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 307 --------------------------------------WCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp --------------------------------------CCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred --------------------------------------ceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 89999999999 89999999999999984
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=333.47 Aligned_cols=310 Identities=11% Similarity=0.144 Sum_probs=249.3
Q ss_pred eCCCeEEeeecccCcEEEEeecCCcccEEEEEEee-CCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceee--
Q 011452 112 AQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNK-NNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFE-- 188 (485)
Q Consensus 112 s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~sp-dg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~-- 188 (485)
+.++++++|+.++++....+.+ |...|.+++|+| +|+.||+++. | ++++||++..++.........
T Consensus 20 ~~~~~~~v~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~~l~~~~~----d------g~i~iw~~~~~~~~~~~~~~~~~ 88 (408)
T 4a11_B 20 RAESTRRVLGLELNKDRDVERI-HGGGINTLDIEPVEGRYMLSGGS----D------GVIVLYDLENSSRQSYYTCKAVC 88 (408)
T ss_dssp HHHHHHHHHTEEECTTEEECCC-CSSCEEEEEECTTTCCEEEEEET----T------SCEEEEECCCCSSSSCEEECEEE
T ss_pred eccCcceeeccccCcceeeeec-cCCcEEEEEEecCCCCEEEEEcC----C------CeEEEEECCCCcccceEeccccc
Confidence 4567889999999999988877 888999999999 9999999774 3 589999998887643211100
Q ss_pred -------eccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcC---CceEEEEEcCCCCe
Q 011452 189 -------SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISP---GIMLLIFTKASGHV 257 (485)
Q Consensus 189 -------~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSp---g~~ll~sss~~~D~ 257 (485)
..+...+..++|++.++.+|++++.|++|++||+.+++++..+. ...+.+++|+| ++.++++++ .|+
T Consensus 89 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 166 (408)
T 4a11_B 89 SIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT--RGP 166 (408)
T ss_dssp EECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE--SSS
T ss_pred cccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc--CCC
Confidence 12445677899984488899999999999999999999888875 56899999997 333555544 348
Q ss_pred eEEEEecCCCeEEEEeecCCcceeEEEEEecCCCE-EEEEeCCCcEEEEECCCCe-eEEec---------------ccCC
Q 011452 258 PLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK-LLVKQENENLQILDVRNFE-LTEVS---------------RTEF 320 (485)
Q Consensus 258 tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~-lls~s~D~tIkIWDv~tg~-~~~~l---------------~gh~ 320 (485)
.|++||+++++++.++.+|...+..++|+ |++.. +++++.|++|+|||+++++ ++..+ .+|.
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWS-PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHN 245 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEEC-SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCS
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEEC-CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccccc
Confidence 99999999999999999999999999997 56664 7778999999999999876 44444 6799
Q ss_pred CceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCC-eeEEEECCCCCEEEEEecCCCCCCCCcCCC
Q 011452 321 MTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCN-TNNIYITSDQDLIISYCKADSDDPLAEGNA 397 (485)
Q Consensus 321 ~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~-v~svafSpDG~~LaS~s~d~~~d~~~~~~D 397 (485)
..|.+++|+|++++|++++ |++|++||++ ++.+..+.++........ ...+...+.+.+++ ++. |
T Consensus 246 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~ 313 (408)
T 4a11_B 246 GKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVF-VPY-----------G 313 (408)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEE-EEE-----------T
T ss_pred CceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEE-Eec-----------C
Confidence 9999999999999999999 9999999996 887766665543211111 22333334444444 454 6
Q ss_pred CeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCC
Q 011452 398 GSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRH 477 (485)
Q Consensus 398 gtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~D 477 (485)
++|++||+.+++++.++.+|.. .|++++|+|||+.|+||+.|
T Consensus 314 ~~i~v~d~~~~~~~~~~~~~~~--------------------------------------~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 314 STIAVYTVYSGEQITMLKGHYK--------------------------------------TVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp TEEEEEETTTCCEEEEECCCSS--------------------------------------CEEEEEEETTTTEEEEEETT
T ss_pred CEEEEEECcCCcceeeeccCCC--------------------------------------eEEEEEEcCCCCEEEEECCC
Confidence 9999999999999999999973 89999999999999999999
Q ss_pred CcEEEccC
Q 011452 478 GLVHVWSN 485 (485)
Q Consensus 478 gtVklWd~ 485 (485)
|+|++||.
T Consensus 356 g~i~iw~~ 363 (408)
T 4a11_B 356 CNILAWVP 363 (408)
T ss_dssp SCEEEEEE
T ss_pred CeEEEEeC
Confidence 99999983
No 63
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-41 Score=330.04 Aligned_cols=237 Identities=12% Similarity=0.149 Sum_probs=199.2
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC--CeEEEEEcC--CcEEEEEEcC--CceEEEEEcCCCCeeEEEEec
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN--YTMLYSISD--KNVQEIKISP--GIMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~--g~~l~tl~~--~~V~~VafSp--g~~ll~sss~~~D~tIklWdi 264 (485)
|...+..++|+ |+|++||+|+.|++|||||+.+ ++++.++.+ ..|++|+|+| ++.++++++ .|++|+|||+
T Consensus 8 h~~~V~~~~~s-~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s--~D~~v~iWd~ 84 (297)
T 2pm7_B 8 HNEMIHDAVMD-YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDGKVMIWKE 84 (297)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE--TTTEEEEEEB
T ss_pred CcCceEEEEEC-CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc--CCCEEEEEEc
Confidence 55677899998 8999999999999999999975 357777754 5899999985 244444544 4589999999
Q ss_pred CCCe--EEEEeecCCcceeEEEEEecC-CCEEEEEeCCCcEEEEECCCCee--EEecccCCCceEEEEEcCC--------
Q 011452 265 EDGT--VLKSFNHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNFEL--TEVSRTEFMTPSAFIFLYE-------- 331 (485)
Q Consensus 265 ~tG~--~L~tl~~~~~~~~~V~f~~~~-~~~lls~s~D~tIkIWDv~tg~~--~~~l~gh~~~v~avaFspd-------- 331 (485)
++|+ .+.++.+|...+.+|+|++.. +..|++++.|++|+|||++++.. ...+.+|...|.+++|+|+
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 164 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccC
Confidence 9984 677888999999999997432 67888899999999999997642 4567899999999999997
Q ss_pred -----CcEEEEEe-CCcEEEEeCC-Cc----EEEEeecCCCCCCCCCeeEEEECCCC---CEEEEEecCCCCCCCCcCCC
Q 011452 332 -----NQLFLTFR-NRTVAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSDQ---DLIISYCKADSDDPLAEGNA 397 (485)
Q Consensus 332 -----g~llaS~s-D~TIklWd~~-G~----ll~tl~gH~~~~~~~~v~svafSpDG---~~LaS~s~d~~~d~~~~~~D 397 (485)
+++|||++ |++|+|||++ ++ ++.+|++|..+ |++|+|+|++ ++|||++. |
T Consensus 165 ~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~-----V~~v~~sp~~~~~~~las~s~-----------D 228 (297)
T 2pm7_B 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYMASVSQ-----------D 228 (297)
T ss_dssp -----CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEET-----------T
T ss_pred CCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc-----eEEEEECCCCCCceEEEEEEC-----------C
Confidence 57999999 9999999995 66 78899999988 9999999995 89999997 7
Q ss_pred CeEEEEeCCCCe---EEEEe--cCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEE
Q 011452 398 GSINISNILTGK---CLAKI--RASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIY 472 (485)
Q Consensus 398 gtIklWdl~TGk---~l~tl--~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~La 472 (485)
++|+|||+.+++ ....+ .+|. ..|++++|+|||+.||
T Consensus 229 ~~v~iWd~~~~~~~~~~~~~~~~~~~--------------------------------------~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 229 RTCIIWTQDNEQGPWKKTLLKEEKFP--------------------------------------DVLWRASWSLSGNVLA 270 (297)
T ss_dssp SCEEEEEESSTTSCCEEEESSSSCCS--------------------------------------SCEEEEEECSSSCCEE
T ss_pred CcEEEEEeCCCCCccceeeeecccCC--------------------------------------CcEEEEEECCCCCEEE
Confidence 999999998753 22333 2343 2899999999999999
Q ss_pred EecCCCcEEEcc
Q 011452 473 TGNRHGLVHVWS 484 (485)
Q Consensus 473 Sgs~DgtVklWd 484 (485)
+|+.|++|+||+
T Consensus 271 s~~~D~~v~lw~ 282 (297)
T 2pm7_B 271 LSGGDNKVTLWK 282 (297)
T ss_dssp EEETTSCEEEEE
T ss_pred EEcCCCcEEEEE
Confidence 999999999997
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.3e-41 Score=332.26 Aligned_cols=285 Identities=10% Similarity=0.052 Sum_probs=238.9
Q ss_pred cccceEEEEEecCEEEEEeCCCeEEeeecccCc------EEEEeecCCcccEEEEEEeeC----C---CEEEEEEeecCC
Q 011452 94 KRSKIIEIVAARDIVFALAQSGVCAAFCRETNQ------RICFLNVTADEVIRSLFYNKN----N---DSLITVSVYASD 160 (485)
Q Consensus 94 ~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~------~l~tl~g~~~~~i~sv~~spd----g---~~Las~S~d~~~ 160 (485)
|..+|.+|.|+.++||+++.||+|++|+..+++ ++.++.+ |...|.+++|+|+ | +.|++++.
T Consensus 15 h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s~~~---- 89 (397)
T 1sq9_A 15 HDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVATTSF---- 89 (397)
T ss_dssp SSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEEEET----
T ss_pred hhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEEEcC----
Confidence 666777777777899999999999999999988 7888886 8889999999999 9 99999774
Q ss_pred CCcccceeEEEEeEeccCCcCcccceeee-cc-----ccCceEEEEeC---CCCeE-EEEeeCCCcEEEeecCC------
Q 011452 161 NFSSLRCRSTRIEYIRRGKPDAGFALFES-ES-----LKWPGFVEFDD---VNGKV-LTYSAQDSIYKVFDLKN------ 224 (485)
Q Consensus 161 d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~-----~~~~~~V~Fs~---pnG~~-Las~s~D~tiKlWdl~~------ 224 (485)
| +++++|++..++......+... .+ ...+..++|++ |+|++ |++++.|++|++||+.+
T Consensus 90 d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 90 S------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp T------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred C------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 3 5899999988874110001111 12 25577899972 58999 99999999999999998
Q ss_pred CeEEE-----EE---------cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeec---C---CcceeEEE
Q 011452 225 YTMLY-----SI---------SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH---L---LHRNKKVD 284 (485)
Q Consensus 225 g~~l~-----tl---------~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~---~---~~~~~~V~ 284 (485)
++++. ++ +...|.+++|+|++ ++++++ .|++|++||+.+++++.++.. | ...+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCccceEE
Confidence 66554 55 35689999999977 665544 458999999999999999998 8 88999999
Q ss_pred EEecCCCEEEEEeCC---CcEEEEECCCCeeEEeccc-------------CCCceEEEEEcCCCcEEEEEe-CCcEEEEe
Q 011452 285 FIEQFNEKLLVKQEN---ENLQILDVRNFELTEVSRT-------------EFMTPSAFIFLYENQLFLTFR-NRTVAVWN 347 (485)
Q Consensus 285 f~~~~~~~lls~s~D---~tIkIWDv~tg~~~~~l~g-------------h~~~v~avaFspdg~llaS~s-D~TIklWd 347 (485)
|+ |++..|++++.| ++|+|||+++++++..+.+ |...|.+++|+|++++|++++ |++|+|||
T Consensus 241 ~~-~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 241 FS-PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp EC-SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred EC-CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 97 678899999999 9999999999999999998 999999999999999999999 99999999
Q ss_pred CC-CcEEEEee------cC---------------CCCCCCCCeeEEEECCCC----------CEEEEEecCCCCCCCCcC
Q 011452 348 FR-GELVTSFE------DH---------------LLWHPDCNTNNIYITSDQ----------DLIISYCKADSDDPLAEG 395 (485)
Q Consensus 348 ~~-G~ll~tl~------gH---------------~~~~~~~~v~svafSpDG----------~~LaS~s~d~~~d~~~~~ 395 (485)
++ ++++.++. +| ... |++++|+||| ++|++++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----v~~~~~~~~g~~~~~~~~~~~~l~s~~~---------- 384 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG-----VFDVKFLKKGWRSGMGADLNESLCCVCL---------- 384 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC-----EEEEEEECTTTSBSTTCTTSCEEEEEET----------
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCc-----eeEEEeccccccccccccccceEEEecC----------
Confidence 96 99999999 87 655 9999999999 79999987
Q ss_pred CCCeEEEEeCCCCe
Q 011452 396 NAGSINISNILTGK 409 (485)
Q Consensus 396 ~DgtIklWdl~TGk 409 (485)
||+|+|||+.+|+
T Consensus 385 -dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 385 -DRSIRWFREAGGK 397 (397)
T ss_dssp -TTEEEEEEEEC--
T ss_pred -CCcEEEEEcCCCC
Confidence 7999999998875
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.8e-41 Score=326.96 Aligned_cols=305 Identities=12% Similarity=0.057 Sum_probs=234.0
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD 214 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D 214 (485)
|.+.|.+++|+|+|+.||+++. + ++++||++..+++.. ...+. .+...+..++|+ |+|++|++++.|
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~----d------~~v~i~~~~~~~~~~-~~~~~-~h~~~v~~~~~~-~~~~~l~~~~~d 73 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPN----N------HEVHIYEKSGNKWVQ-VHELK-EHNGQVTGVDWA-PDSNRIVTCGTD 73 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECS----S------SEEEEEEEETTEEEE-EEEEE-CCSSCEEEEEEE-TTTTEEEEEETT
T ss_pred cCCCeEEEEECCCCCEEEEEeC----C------CEEEEEeCCCCcEEe-eeeec-CCCCcccEEEEe-CCCCEEEEEcCC
Confidence 7788999999999999998653 4 599999998875211 11232 244567789998 799999999999
Q ss_pred CcEEEeecCCCeEEEEE----cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCe---EEEEe-ecCCcceeEEEEE
Q 011452 215 SIYKVFDLKNYTMLYSI----SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGT---VLKSF-NHLLHRNKKVDFI 286 (485)
Q Consensus 215 ~tiKlWdl~~g~~l~tl----~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~---~L~tl-~~~~~~~~~V~f~ 286 (485)
++|+|||+.++++...+ +...|.+++|+|++.++++++ .|++|++||+++++ ++..+ .+|...+..++|+
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS--GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE--TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe--CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 99999999999865544 346899999998666665554 34899999999987 34444 5778889999997
Q ss_pred ecCCCEEEEEeCCCcEEEEEC------------------CCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEe
Q 011452 287 EQFNEKLLVKQENENLQILDV------------------RNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 347 (485)
Q Consensus 287 ~~~~~~lls~s~D~tIkIWDv------------------~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd 347 (485)
|++..+++++.|++|+|||+ .+++++..+.+|...|.+++|+|++++|++++ |++|++||
T Consensus 152 -~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 152 -PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp -TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred -CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 67888999999999999995 47899999999999999999999999999999 99999999
Q ss_pred CC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC--C--eEEEEecCCCCCCC
Q 011452 348 FR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILT--G--KCLAKIRASNGLPA 422 (485)
Q Consensus 348 ~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T--G--k~l~tl~gH~~~~~ 422 (485)
++ ++++.++.+|... |.+++|+|||++|+++ . |++|+|||+.+ | +++.++..+.....
T Consensus 231 ~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~-~-----------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 293 (372)
T 1k8k_C 231 ADKKMAVATLASETLP-----LLAVTFITESSLVAAG-H-----------DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQ 293 (372)
T ss_dssp GGGTTEEEEEECSSCC-----EEEEEEEETTEEEEEE-T-----------TSSCEEEEEETTTTEEEECCCCCCC-----
T ss_pred CCCCceeEEEccCCCC-----eEEEEEecCCCEEEEE-e-----------CCeEEEEEccCcCceEEEeeccCccccchh
Confidence 96 9999999999877 9999999999999988 4 69999999988 6 44444433321000
Q ss_pred C-------cccccCCCCCC-----CCccccccccccccccchhcccCCeEEEEE-cCCC---CEEEEecCCCcEEEccC
Q 011452 423 E-------NECSCSGDYSS-----GSCNVKKHSHASRIRSTVAEALEDITALFY-DEDR---NEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 423 ~-------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~V~sl~f-spDg---~~LaSgs~DgtVklWd~ 485 (485)
. ......+++.. ..+.. ..+...|++|+| ++|| +.|+||+.||+|+||++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 294 RGLTARERFQNLDKKASSEGSAAAGAGLD-------------SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp ---CHHHHHHHCCCCC---------CCCS-------------SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred hhcchhhhhhhcccccccccCcccccccc-------------ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 0 00000000000 00000 012248999984 5887 99999999999999983
No 66
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.5e-41 Score=337.76 Aligned_cols=287 Identities=12% Similarity=0.137 Sum_probs=219.0
Q ss_pred ceEEEEEe--cCEEEEEeCCC-------eEEeeecccCcEE----------EEeecCCcccEEEEEEeeCCCEEEEEEee
Q 011452 97 KIIEIVAA--RDIVFALAQSG-------VCAAFCRETNQRI----------CFLNVTADEVIRSLFYNKNNDSLITVSVY 157 (485)
Q Consensus 97 ~V~~i~~s--~~~ias~s~dg-------tiklW~~~tG~~l----------~tl~g~~~~~i~sv~~spdg~~Las~S~d 157 (485)
||++++|+ +++||+|+.|. .+++|++..+... .+|.+ |+..|.++++ +++.|+++..+
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~-~~~~v~s~~~--~~~~~~~g~~~ 92 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALED-NDDSPTAIDA--SKGIILVGCNE 92 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCT-TSCCCCEEEE--ETTEEEEECCC
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccC-CCCceEEEEe--CCCEEEEEECC
Confidence 56667766 89999997644 5999998765421 23555 6677888765 55677776532
Q ss_pred cCCCC-cccceeEEEEeEeccCCcCc----ccceeee-ccccCceEEEEeCCCCeEEE--EeeCCCcEEEeecCCCeEEE
Q 011452 158 ASDNF-SSLRCRSTRIEYIRRGKPDA----GFALFES-ESLKWPGFVEFDDVNGKVLT--YSAQDSIYKVFDLKNYTMLY 229 (485)
Q Consensus 158 ~~~d~-stL~~~t~~lw~i~~G~~~~----~~~lf~~-~~~~~~~~V~Fs~pnG~~La--s~s~D~tiKlWdl~~g~~l~ 229 (485)
+...+ +.-..+++++|++..++... ...+... ..-.++..|+|| |||++|| +++.|++|||||++++++++
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fS-pDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYIS-REGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEEC-TTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEc-CCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 21110 11112688999986554310 0001111 122346689998 8999875 55689999999999999999
Q ss_pred EEc-CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEE--eecCCcceeEEEEEecCCCEEEEEeCCC----cE
Q 011452 230 SIS-DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS--FNHLLHRNKKVDFIEQFNEKLLVKQENE----NL 302 (485)
Q Consensus 230 tl~-~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~t--l~~~~~~~~~V~f~~~~~~~lls~s~D~----tI 302 (485)
++. ...|.+|+|||++.+++++++ .++++|+..+|+.+.. +.+|...+.+|+|+ |++..+++++.|+ ++
T Consensus 172 ~~~~~~~V~~v~fspdg~~l~s~s~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs-pdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 172 EIETRGEVKDLHFSTDGKVVAYITG---SSLEVISTVTGSCIARKTDFDKNWSLSKINFI-ADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECS---SCEEEEETTTCCEEEEECCCCTTEEEEEEEEE-ETTEEEEEEEESSSCCEEE
T ss_pred EeCCCCceEEEEEccCCceEEeccc---eeEEEEEeccCcceeeeecCCCCCCEEEEEEc-CCCCEEEEEecCCcceeEE
Confidence 885 568999999998888887654 4788888888888754 45677789999998 6788888888776 79
Q ss_pred EEEECCCCee----EEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEe-ecCCCCCCCCCeeEEEECC
Q 011452 303 QILDVRNFEL----TEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF-EDHLLWHPDCNTNNIYITS 375 (485)
Q Consensus 303 kIWDv~tg~~----~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl-~gH~~~~~~~~v~svafSp 375 (485)
++||+..+.. ...+.+|...|++++|||||++||+++ |++|+|||++ |+++.++ ++|..+ |++|+|||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~-----V~~v~fSp 322 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFA-----ITEVTISP 322 (365)
T ss_dssp EEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSC-----EEEEEECT
T ss_pred eecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCC-----EEEEEECC
Confidence 9999987764 456788999999999999999999999 9999999996 9999885 899988 99999999
Q ss_pred CCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 376 DQDLIISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 376 DG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
||++|||+|. |+|||||||.+
T Consensus 323 dg~~laS~S~-----------D~tvrvw~ip~ 343 (365)
T 4h5i_A 323 DSTYVASVSA-----------ANTIHIIKLPL 343 (365)
T ss_dssp TSCEEEEEET-----------TSEEEEEECCT
T ss_pred CCCEEEEEeC-----------CCeEEEEEcCC
Confidence 9999999997 79999999864
No 67
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.6e-40 Score=337.52 Aligned_cols=274 Identities=11% Similarity=0.119 Sum_probs=229.6
Q ss_pred cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceEEEEeCCCCeEEEEeeCCCc
Q 011452 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSI 216 (485)
Q Consensus 138 ~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~D~t 216 (485)
-++.|+||++| .||++. | ++|+||++.+|++. .+++. ++..++.+|+|+ |||++||+|+.|++
T Consensus 107 y~~~l~wS~~n-~lAvgl----d-------~tV~lWd~~tg~~~---~~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~ 170 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVAL----D-------NSVYLWSASSGDIL---QLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAE 170 (420)
T ss_dssp TCBCEEECTTS-EEEEEE----T-------TEEEEEETTTCCEE---EEEECCSTTCCEEEEEEC-TTSSEEEEEETTSC
T ss_pred cceeEEECCCC-EEEEEe----C-------CEEEEEECCCCCEE---EEEEecCCCCcEEEEEEC-CCCCEEEEEECCCe
Confidence 36679999875 676633 3 49999999999873 34543 355678899998 79999999999999
Q ss_pred EEEeecCCCeEEEEEcCC--cEEEEEEcCCceEEEEEcCCCCeeEEEEecCC-CeEEEEeecCCcceeEEEEEecCCCEE
Q 011452 217 YKVFDLKNYTMLYSISDK--NVQEIKISPGIMLLIFTKASGHVPLKILSIED-GTVLKSFNHLLHRNKKVDFIEQFNEKL 293 (485)
Q Consensus 217 iKlWdl~~g~~l~tl~~~--~V~~VafSpg~~ll~sss~~~D~tIklWdi~t-G~~L~tl~~~~~~~~~V~f~~~~~~~l 293 (485)
|+|||+.+++++.++.++ .|.++++++ .++++++ .|+++++||... ...+.++.+|...+..+.|. +++..+
T Consensus 171 v~iWd~~~~~~~~~~~~h~~~v~~~s~~~--~~l~sgs--~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~-~~g~~l 245 (420)
T 4gga_A 171 VQLWDVQQQKRLRNMTSHSARVGSLSWNS--YILSSGS--RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA-PDGRHL 245 (420)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEET--TEEEEEE--TTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEE
T ss_pred EEEEEcCCCcEEEEEeCCCCceEEEeeCC--CEEEEEe--CCCceeEeeecccceeeEEecccccceeeeeec-CCCCee
Confidence 999999999999998754 677666653 3444544 458999999876 45678899999999999986 778899
Q ss_pred EEEeCCCcEEEEECCCCe----eEEecccCCCceEEEEEcCCC-cEEEE--Ee-CCcEEEEeCC-CcEEEEeecCCCCCC
Q 011452 294 LVKQENENLQILDVRNFE----LTEVSRTEFMTPSAFIFLYEN-QLFLT--FR-NRTVAVWNFR-GELVTSFEDHLLWHP 364 (485)
Q Consensus 294 ls~s~D~tIkIWDv~tg~----~~~~l~gh~~~v~avaFspdg-~llaS--~s-D~TIklWd~~-G~ll~tl~gH~~~~~ 364 (485)
++++.|++|+|||+.+++ .+.....|...|.+++|+|++ .++++ ++ |++|+|||++ |+++..+..|..
T Consensus 246 ~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~--- 322 (420)
T 4gga_A 246 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ--- 322 (420)
T ss_dssp EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC---
T ss_pred eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc---
Confidence 999999999999999876 356677899999999999965 45554 45 9999999996 999999987752
Q ss_pred CCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCcccccccc
Q 011452 365 DCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSH 444 (485)
Q Consensus 365 ~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (485)
+.++.|+|+++.|++++. +.|++|+|||+.+++++++|.||++
T Consensus 323 ---v~~~~~~~~~~~lv~~sg---------~~d~~I~iwd~~~~~~v~~l~gH~~------------------------- 365 (420)
T 4gga_A 323 ---VCSILWSPHYKELISGHG---------FAQNQLVIWKYPTMAKVAELKGHTS------------------------- 365 (420)
T ss_dssp ---EEEEEEETTTTEEEEEEC---------TTTCCEEEEETTTCCEEEEECCCSS-------------------------
T ss_pred ---eeeeeecCCCCeEEEEEe---------cCCCEEEEEECCCCcEEEEEcCCCC-------------------------
Confidence 789999999999999873 2489999999999999999999983
Q ss_pred ccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 445 ASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 445 ~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.|++|+|+|||++|||||.|++|||||+
T Consensus 366 -------------~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 366 -------------RVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp -------------CEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred -------------CEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 8999999999999999999999999984
No 68
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-40 Score=319.59 Aligned_cols=286 Identities=11% Similarity=0.084 Sum_probs=244.9
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
|..+|..++|+ +++||+++.||++++||..+++.+.++.+ |...|.+++|+|+|+.|++++. | ++++
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~----d------g~i~ 99 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTKYCVTGSA----D------YSIK 99 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEET----T------TEEE
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCCEEEEEeC----C------CeEE
Confidence 56666666666 89999999999999999999999999987 8889999999999999999774 3 5999
Q ss_pred EeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC-----CcEEEeecCCCeE-----------EEEE--cC
Q 011452 172 IEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYTM-----------LYSI--SD 233 (485)
Q Consensus 172 lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D-----~tiKlWdl~~g~~-----------l~tl--~~ 233 (485)
||++.+|++.. .+. +...+..++|+ |+|++|++++.| ++|++||+.++.. +..+ +.
T Consensus 100 iwd~~~~~~~~---~~~--~~~~v~~~~~~-~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 100 LWDVSNGQCVA---TWK--SPVPVKRVEFS-PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp EEETTTCCEEE---EEE--CSSCEEEEEEC-TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred EEECCCCcEEE---Eee--cCCCeEEEEEc-cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 99999888732 333 33456789998 799999999999 9999999976542 1122 12
Q ss_pred C--cEEEEEEcCCceEEEEEcCCCCeeEEEEecCC-CeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q 011452 234 K--NVQEIKISPGIMLLIFTKASGHVPLKILSIED-GTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNF 310 (485)
Q Consensus 234 ~--~V~~VafSpg~~ll~sss~~~D~tIklWdi~t-G~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg 310 (485)
. .|.+++|+|++.++++++ .|++|++||+.+ ++++.++..|...+..++|+ |++..|++++.|++|++||++++
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGH--KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS-PDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEE--TTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTC
T ss_pred CccceeEEEEcCCCCEEEEEc--CCCEEEEEECCCCcEeEEEEecCCCceeEEEEC-CCCCEEEEecCCceEEEEECCCC
Confidence 2 899999999776666654 348999999999 89999999999999999997 67889999999999999999999
Q ss_pred eeEEecccCCCceEEEEEcCCCcEEEEEe-CC--------------cEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEEC
Q 011452 311 ELTEVSRTEFMTPSAFIFLYENQLFLTFR-NR--------------TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYIT 374 (485)
Q Consensus 311 ~~~~~l~gh~~~v~avaFspdg~llaS~s-D~--------------TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafS 374 (485)
+++..+. +...+.+++|+|+++++++++ ++ +|++||.. ++++.++.+|... |.+++|+
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----v~~~~~s 324 (369)
T 3zwl_B 251 QVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGP-----LNTVAIS 324 (369)
T ss_dssp CEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSC-----EEEEEEC
T ss_pred ceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCc-----EEEEEEC
Confidence 9999886 677999999999999999999 77 89999996 9999999999877 9999999
Q ss_pred CCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 375 SDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 375 pDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
|||++|++++. ||+|+|||+.++.....+..
T Consensus 325 ~~~~~l~s~~~-----------dg~v~iw~~~~~~~~~~~~~ 355 (369)
T 3zwl_B 325 PQGTSYASGGE-----------DGFIRLHHFEKSYFDFKYDV 355 (369)
T ss_dssp TTSSEEEEEET-----------TSEEEEEEECHHHHTCCCHH
T ss_pred CCCCEEEEEcC-----------CCeEEEEECccccchhHHHH
Confidence 99999999997 79999999988776555443
No 69
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2e-41 Score=337.97 Aligned_cols=273 Identities=10% Similarity=0.099 Sum_probs=227.7
Q ss_pred EEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEE
Q 011452 139 IRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYK 218 (485)
Q Consensus 139 i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiK 218 (485)
+.+++|+|+|+.|++++.+ +++++|++..++... .+.. + ..+....|+ ++|++||+++.|++|+
T Consensus 59 ~~~~~~s~~g~~l~~~~~d----------~~v~i~d~~~~~~~~---~~~~-~-~~~~~~~~~-~~~~~l~~~~~dg~i~ 122 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLD----------GHDFLFNTIIRDGSK---MLKR-A-DYTAVDTAK-LQMRRFILGTTEGDIK 122 (420)
T ss_dssp CTTCEEEEEETTEEEEEET----------TEEEEEECCSEETTT---TSCS-C-CEEEEEEEC-SSSCEEEEEETTSCEE
T ss_pred ccceeeeecCCeEEEEEcC----------CcEEEEEecccceee---EEec-C-CceEEEEEe-cCCCEEEEEECCCCEE
Confidence 4579999999999998853 499999997776532 2222 1 222234665 8999999999999999
Q ss_pred EeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEE
Q 011452 219 VFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK 296 (485)
Q Consensus 219 lWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~ 296 (485)
|||+.+++++..+. ...|.+++|+|++.++++++. |++|+|||+++|+++.++.+|...+..++|+ |++..|+++
T Consensus 123 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~ 199 (420)
T 3vl1_A 123 VLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ--DMQLKIWSVKDGSNPRTLIGHRATVTDIAII-DRGRNVLSA 199 (420)
T ss_dssp EECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCCCEEEECCSSCEEEEEEE-TTTTEEEEE
T ss_pred EEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC--CCeEEEEeCCCCcCceEEcCCCCcEEEEEEc-CCCCEEEEE
Confidence 99999999988874 468999999997766666554 5899999999999999999999999999997 678899999
Q ss_pred eCCCcEEEEECCCCeeEEeccc---CCCceEEE---------------------EEcCCCcEEEEEe-CCcEEEEeCC-C
Q 011452 297 QENENLQILDVRNFELTEVSRT---EFMTPSAF---------------------IFLYENQLFLTFR-NRTVAVWNFR-G 350 (485)
Q Consensus 297 s~D~tIkIWDv~tg~~~~~l~g---h~~~v~av---------------------aFspdg~llaS~s-D~TIklWd~~-G 350 (485)
+.|++|+|||+++++++..+.. |...+.++ +|+|+|++|++++ |++|++||++ +
T Consensus 200 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 200 SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC
T ss_pred cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999999999999999998875 33444444 4579999999999 9999999996 8
Q ss_pred cEEEEee-cCCCCCCCCCeeEEEECCCCC-EEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE-EEEecCCCCCCCCcccc
Q 011452 351 ELVTSFE-DHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNAGSINISNILTGKC-LAKIRASNGLPAENECS 427 (485)
Q Consensus 351 ~ll~tl~-gH~~~~~~~~v~svafSpDG~-~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~-l~tl~gH~~~~~~~~~~ 427 (485)
+.+..+. +|... |.+++|+|+|+ +|++++. ||+|+|||+.++++ +.++.+|..
T Consensus 280 ~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~g~~-----------dg~i~vwd~~~~~~~~~~~~~~~~-------- 335 (420)
T 3vl1_A 280 EQTIQLPSKFTCS-----CNSLTVDGNNANYIYAGYE-----------NGMLAQWDLRSPECPVGEFLINEG-------- 335 (420)
T ss_dssp CEEEEECCTTSSC-----EEEEEECSSCTTEEEEEET-----------TSEEEEEETTCTTSCSEEEEESTT--------
T ss_pred ceeEEcccccCCC-----ceeEEEeCCCCCEEEEEeC-----------CCeEEEEEcCCCcCchhhhhccCC--------
Confidence 8777665 46666 99999999999 9999987 79999999999865 888988652
Q ss_pred cCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 428 CSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
..|++++| |+++.|+||+.|++|+||+
T Consensus 336 -----------------------------~~v~~~~~-~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 336 -----------------------------TPINNVYF-AAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp -----------------------------SCEEEEEE-ETTEEEEEETTTEEEEEEE
T ss_pred -----------------------------CCceEEEe-CCCCEEEEecCCccEEEEe
Confidence 27888855 5889999999999999998
No 70
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.7e-41 Score=331.49 Aligned_cols=278 Identities=13% Similarity=0.152 Sum_probs=224.4
Q ss_pred cccceEEEEEe--c-CEEEEEeCCCeEEeeecccCcEEEEeec-CCcccEEEEEEee-CCCEEEEEEeecCCCCccccee
Q 011452 94 KRSKIIEIVAA--R-DIVFALAQSGVCAAFCRETNQRICFLNV-TADEVIRSLFYNK-NNDSLITVSVYASDNFSSLRCR 168 (485)
Q Consensus 94 ~~s~V~~i~~s--~-~~ias~s~dgtiklW~~~tG~~l~tl~g-~~~~~i~sv~~sp-dg~~Las~S~d~~~d~stL~~~ 168 (485)
+..+|.+|.|+ + ++||+++.||+|++||..+++..+.+.. +|...|.+++|+| +++.|++++. | +
T Consensus 72 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~----d------~ 141 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI----R------G 141 (383)
T ss_dssp CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET----T------T
T ss_pred CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC----C------C
Confidence 34455555555 6 7999999999999999999998887763 4888999999999 7899998774 3 5
Q ss_pred EEEEeEeccCCcCcccceeee--ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC
Q 011452 169 STRIEYIRRGKPDAGFALFES--ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPG 244 (485)
Q Consensus 169 t~~lw~i~~G~~~~~~~lf~~--~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg 244 (485)
+++||++..+.+ ..+.. .+...+..++|+ |+|++|++++.|++|++||+ +++++.++. ...|.+|+|+|+
T Consensus 142 ~i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 142 ATTLRDFSGSVI----QVFAKTDSWDYWYCCVDVS-VSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp EEEEEETTSCEE----EEEECCCCSSCCEEEEEEE-TTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSS
T ss_pred EEEEEECCCCce----EEEeccCCCCCCeEEEEEC-CCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCC
Confidence 999999864322 22222 122456789998 79999999999999999999 677887775 468999999997
Q ss_pred ce-EEEEEcCCCCeeEEEEecCC----CeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccC
Q 011452 245 IM-LLIFTKASGHVPLKILSIED----GTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTE 319 (485)
Q Consensus 245 ~~-ll~sss~~~D~tIklWdi~t----G~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh 319 (485)
+. ++++++ .|++|+|||+.+ ++++.++ +|...+.+++|++.++..|++++.|++|+|||+++++++..+.+|
T Consensus 216 ~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 216 CDWLMATSS--VDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp CTTEEEEEE--TTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred CCCEEEEEe--CCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence 65 555544 358999999998 8888888 588999999997328889999999999999999999887777766
Q ss_pred C-----------------CceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEE
Q 011452 320 F-----------------MTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 380 (485)
Q Consensus 320 ~-----------------~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~L 380 (485)
. ..+.+++|+|||++ +++ |++|+|||+. |+++.+|.+|... ..+..++|+|||++|
T Consensus 293 ~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~---~~~~~~~~s~~g~~l 367 (383)
T 3ei3_B 293 PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAA---GIISLNKFSPTGDVL 367 (383)
T ss_dssp CBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBC---SCCCEEEECTTSSEE
T ss_pred cccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCC---ceEEEEEEecCccEE
Confidence 4 34455788888887 777 9999999995 9999999985421 227778999999999
Q ss_pred EEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 381 ISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 381 aS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
|+++ |++|+|||+.+
T Consensus 368 ~s~s------------d~~i~iw~~~~ 382 (383)
T 3ei3_B 368 ASGM------------GFNILIWNRED 382 (383)
T ss_dssp EEEE------------TTEEEEEECC-
T ss_pred EEec------------CCcEEEEecCC
Confidence 9996 59999999864
No 71
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.1e-40 Score=355.03 Aligned_cols=281 Identities=11% Similarity=0.109 Sum_probs=230.6
Q ss_pred cccceEEEEEe---cCEEEEEeCCCeEEeeeccc-----CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCccc
Q 011452 94 KRSKIIEIVAA---RDIVFALAQSGVCAAFCRET-----NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSL 165 (485)
Q Consensus 94 ~~s~V~~i~~s---~~~ias~s~dgtiklW~~~t-----G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL 165 (485)
|...|..|.++ +++||++|.||+|++|++.+ +.+.+.+.+ |...|.+|+|+|+|+.|+++|. |
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs~----D---- 451 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGSW----D---- 451 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEET----T----
T ss_pred CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCCEEEEEeC----C----
Confidence 56666666666 47999999999999999875 345667777 8889999999999999999774 4
Q ss_pred ceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE------cCCcEEEE
Q 011452 166 RCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI------SDKNVQEI 239 (485)
Q Consensus 166 ~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl------~~~~V~~V 239 (485)
++++|||+.+|+.. ..+. .|...+.+|+|+ |+|+.|++++.|++|||||+... +..++ |...|.++
T Consensus 452 --g~v~vwd~~~~~~~---~~~~-~h~~~v~~~~~s-~~~~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 452 --GELRLWDLAAGVST---RRFV-GHTKDVLSVAFS-LDNRQIVSASRDRTIKLWNTLGE-CKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp --SEEEEEETTTTEEE---EEEE-CCSSCEEEEEEC-TTSSCEEEEETTSCEEEECTTSC-EEEEECSSTTSCSSCEEEE
T ss_pred --CcEEEEECCCCcce---eEEe-CCCCCEEEEEEe-CCCCEEEEEeCCCEEEEEECCCC-cceeeccCCCCCCCcEEEE
Confidence 59999999888762 2232 355667799998 79999999999999999998654 44444 23479999
Q ss_pred EEcCCc--eEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecc
Q 011452 240 KISPGI--MLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR 317 (485)
Q Consensus 240 afSpg~--~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~ 317 (485)
+|+|++ .++++++ .|++|+|||+.+++++.++.+|.+.+.+|+|+ |++..|++++.|++|+|||+++++++..+.
T Consensus 524 ~~~~~~~~~~l~s~s--~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s-pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 524 RFSPNTLQPTIVSAS--WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS-PDGSLCASGGKDGVVLLWDLAEGKKLYSLE 600 (694)
T ss_dssp EECSCSSSCEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSBCEEEETTTTEEEECCB
T ss_pred EEeCCCCcceEEEEe--CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCceEEEec
Confidence 999864 3444444 45899999999999999999999999999997 788899999999999999999999998886
Q ss_pred cCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCC--------------CCCCeeEEEECCCCCEEEE
Q 011452 318 TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWH--------------PDCNTNNIYITSDQDLIIS 382 (485)
Q Consensus 318 gh~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~--------------~~~~v~svafSpDG~~LaS 382 (485)
.+ ..|.+++|+|++.+|++++|+.|+|||++ ++++.++..|.... ....+.+++|||||++|+|
T Consensus 601 ~~-~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s 679 (694)
T 3dm0_A 601 AN-SVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS 679 (694)
T ss_dssp CS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE
T ss_pred CC-CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE
Confidence 55 57999999999999998888899999996 88998887543210 0012689999999999999
Q ss_pred EecCCCCCCCCcCCCCeEEEEeCC
Q 011452 383 YCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 383 ~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
|+. ||+|+|||+.
T Consensus 680 gs~-----------Dg~i~iW~i~ 692 (694)
T 3dm0_A 680 GYT-----------DGVIRVWGIG 692 (694)
T ss_dssp EET-----------TSEEEEEEC-
T ss_pred EcC-----------CCeEEEEecc
Confidence 997 7999999974
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-39 Score=309.98 Aligned_cols=293 Identities=11% Similarity=0.137 Sum_probs=235.2
Q ss_pred hhccccccccccCCCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeC
Q 011452 68 RNIRLQEEYDTHDPKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKN 147 (485)
Q Consensus 68 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spd 147 (485)
..+++...|..|..++.++.+ |. +++||+++.||++++||..+++.+..+.. |...|.+++|+|+
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~~-------------~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~ 70 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-VD-------------DSKVASVSRDGTVRLWSKDDQWLGTVVYT-GQGFLNSVCYDSE 70 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-EE-------------TTEEEEEETTSEEEEEEESSSEEEEEEEE-CSSCEEEEEEETT
T ss_pred ccHHHHHHhhCCCCCcEEEEe-cC-------------CCEEEEEEcCCcEEEEECCCCEEEEEeec-CCccEEEEEECCC
Confidence 345555566666555555554 44 89999999999999999999999988887 7889999999999
Q ss_pred CCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE
Q 011452 148 NDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM 227 (485)
Q Consensus 148 g~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~ 227 (485)
|+.|++++. | +.+++|++...........+. .+...+..++|+ +.+|++++.|++|++|| .++.
T Consensus 71 ~~~l~~~~~----d------g~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~ 134 (313)
T 3odt_A 71 KELLLFGGK----D------TMINGVPLFATSGEDPLYTLI-GHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSL 134 (313)
T ss_dssp TTEEEEEET----T------SCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEE
T ss_pred CCEEEEecC----C------CeEEEEEeeecCCCCcccchh-hcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcE
Confidence 999999774 3 488999986553211112222 244556678884 67899999999999999 6677
Q ss_pred EEEEc--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEEeec-CCcceeEEEEEecCCCEEEEEeCCCcEE
Q 011452 228 LYSIS--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSFNH-LLHRNKKVDFIEQFNEKLLVKQENENLQ 303 (485)
Q Consensus 228 l~tl~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~-~~~~~~~V~f~~~~~~~lls~s~D~tIk 303 (485)
+..+. ...|.+++|+| ++.++++++ .|++|++|| .++.+.++.. |...+..++|++ + +.+++++.|++|+
T Consensus 135 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~dg~i~ 208 (313)
T 3odt_A 135 VYNLQAHNASVWDAKVVSFSENKFLTAS--ADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD-D-GHFISCSNDGLIK 208 (313)
T ss_dssp EEEEECCSSCEEEEEEEETTTTEEEEEE--TTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE-T-TEEEEEETTSEEE
T ss_pred EEecccCCCceeEEEEccCCCCEEEEEE--CCCCEEEEe--cCceEEEEeccCcccEEEEEEcC-C-CeEEEccCCCeEE
Confidence 76664 56899999996 554455544 348999999 6788999987 888899999974 3 4588899999999
Q ss_pred EEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEE
Q 011452 304 ILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (485)
Q Consensus 304 IWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~La 381 (485)
|||+++++++..+.+|...|.+++|+|+++ |++++ |++|++||++ ++++.++..|... |.+++|+|||+++
T Consensus 209 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~- 281 (313)
T 3odt_A 209 LVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAIS-----IWSVDCMSNGDII- 281 (313)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSSC-----EEEEEECTTSCEE-
T ss_pred EEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEeccCce-----EEEEEEccCCCEE-
Confidence 999999999999999999999999999995 77777 9999999996 9999999999876 9999999999955
Q ss_pred EEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEec
Q 011452 382 SYCKADSDDPLAEGNAGSINISNILTGKCLAKIR 415 (485)
Q Consensus 382 S~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~ 415 (485)
+++. ||+|+|||+.+++++....
T Consensus 282 ~~~~-----------dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 282 VGSS-----------DNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEET-----------TSCEEEEESCGGGCCC---
T ss_pred EEeC-----------CCcEEEEeCCCCceeehhh
Confidence 5665 7999999999988766554
No 73
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.6e-40 Score=341.56 Aligned_cols=271 Identities=14% Similarity=0.140 Sum_probs=214.0
Q ss_pred cCEEEEEeCCCeEEeeecccC---cEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcC
Q 011452 105 RDIVFALAQSGVCAAFCRETN---QRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD 181 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG---~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~ 181 (485)
++.-+..+...+++||+...+ +++.++.+ |..+|..|+|+||---|+.+. -|++
T Consensus 53 ~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~---------------------~~~~- 109 (356)
T 2w18_A 53 KEPCIITACEDVVSLWKALDAWQWEKLYTWHF-AEVPVLQIVPVPDVYNLVCVA---------------------LGNL- 109 (356)
T ss_dssp CEEEEEEEESSEEEEEEESSSSBEEEEEEEEC-CSSCEEEECCCTTCCSCEEEE---------------------ECSS-
T ss_pred CccEEEEeccceEEEcccCCCccceeeEEEec-cCceeEEEEEcCcccceeeee---------------------eccc-
Confidence 555555566779999999999 89999998 888999999999987776643 3544
Q ss_pred cccceeeeccccCceEEEEeCCC----CeEEEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCCCCe
Q 011452 182 AGFALFESESLKWPGFVEFDDVN----GKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGHV 257 (485)
Q Consensus 182 ~~~~lf~~~~~~~~~~V~Fs~pn----G~~Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~~D~ 257 (485)
+...+.+|+|+ || ++++++++++ ++||++.+|++ +.++....|+
T Consensus 110 ---------~~~~v~sla~s-pd~~~~~~~l~s~g~~--~~v~~l~~g~l--------------------v~ss~~g~d~ 157 (356)
T 2w18_A 110 ---------EIREIRALFCS-SDDESEKQVLLKSGNI--KAVLGLTKRRL--------------------VSSSGTLSDQ 157 (356)
T ss_dssp ---------SEEEEEEECC-------CCEEEEEEEEE--EEEEEETTTEE--------------------EEEESSSTTC
T ss_pred ---------cccceEEEEEC-CCccccccEEEeCCCe--EEEEecCCCcE--------------------EEecccCCCC
Confidence 13456689998 79 9999998844 88998755544 4443333568
Q ss_pred eEEEEec-CCCeEEEEeecCCcceeEEEEEe-c-CCCEEEEEeCCCcEEEEECCCCeeEEecccCC---CceEEEEEcCC
Q 011452 258 PLKILSI-EDGTVLKSFNHLLHRNKKVDFIE-Q-FNEKLLVKQENENLQILDVRNFELTEVSRTEF---MTPSAFIFLYE 331 (485)
Q Consensus 258 tIklWdi-~tG~~L~tl~~~~~~~~~V~f~~-~-~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~---~~v~avaFspd 331 (485)
+|++|++ ++|+.+.++.+|.+.+..++|++ + +++.|++++.|+||||||+++|++++++.+|. ..+.+++|+||
T Consensus 158 ~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpd 237 (356)
T 2w18_A 158 QVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEM 237 (356)
T ss_dssp EEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEET
T ss_pred cEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCC
Confidence 9999998 66999999999999999999986 2 45778888999999999999999999998754 36778899999
Q ss_pred CcEE------------EEEe-CCcEEEEeCC-CcEEEEe-----ecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCC
Q 011452 332 NQLF------------LTFR-NRTVAVWNFR-GELVTSF-----EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPL 392 (485)
Q Consensus 332 g~ll------------aS~s-D~TIklWd~~-G~ll~tl-----~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~ 392 (485)
|+++ +|++ |+|||+||.. |+++.++ +||... +.+..+ +|.++||++.
T Consensus 238 G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~-----~lsg~~--sg~~lASgS~------- 303 (356)
T 2w18_A 238 GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR-----FLEGDV--KDHCAAAILT------- 303 (356)
T ss_dssp TEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC-----EEEEEE--ETTEEEEEET-------
T ss_pred CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce-----eEcccc--CCCEEEEEcC-------
Confidence 9987 6678 9999999996 9988877 477644 444444 4899999987
Q ss_pred CcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEE
Q 011452 393 AEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIY 472 (485)
Q Consensus 393 ~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~La 472 (485)
|+||||||+.+|+|+++|++|.+ ..+.+|+|||||++||
T Consensus 304 ----DgTIkIWDl~tGk~l~tL~gH~~-------------------------------------~vvs~vafSPDG~~La 342 (356)
T 2w18_A 304 ----SGTIAIWDLLLGQCTALLPPVSD-------------------------------------QHWSFVKWSGTDSHLL 342 (356)
T ss_dssp ----TSCEEEEETTTCSEEEEECCC---------------------------------------CCCCEEEECSSSSEEE
T ss_pred ----CCcEEEEECCCCcEEEEecCCCC-------------------------------------CeEEEEEECCCCCEEE
Confidence 79999999999999999999973 1345699999999999
Q ss_pred EecCCCcEEEccC
Q 011452 473 TGNRHGLVHVWSN 485 (485)
Q Consensus 473 Sgs~DgtVklWd~ 485 (485)
|||.|++|||||.
T Consensus 343 SGS~D~TIklWd~ 355 (356)
T 2w18_A 343 AGQKDGNIFVYHY 355 (356)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEECCCcEEEecC
Confidence 9999999999983
No 74
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-40 Score=321.97 Aligned_cols=279 Identities=13% Similarity=0.112 Sum_probs=231.2
Q ss_pred cccceEEEEEe------cCEEEEEeCCCeEEeeecccCcEEEEeecC----CcccEEEEEEeeC----CCEEEEEEeecC
Q 011452 94 KRSKIIEIVAA------RDIVFALAQSGVCAAFCRETNQRICFLNVT----ADEVIRSLFYNKN----NDSLITVSVYAS 159 (485)
Q Consensus 94 ~~s~V~~i~~s------~~~ias~s~dgtiklW~~~tG~~l~tl~g~----~~~~i~sv~~spd----g~~Las~S~d~~ 159 (485)
|..+|..|+|+ ...+++++.++.+++|+..+++.+..+... |...|.+++|+|+ |+.|++++.
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~--- 93 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS--- 93 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET---
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC---
Confidence 45556666665 456777777889999999999988877652 4567999999999 668988773
Q ss_pred CCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE-----cCC
Q 011452 160 DNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-----SDK 234 (485)
Q Consensus 160 ~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl-----~~~ 234 (485)
| ++++||++.++++.. .+. .+...+..++|++.++++|++++.|++|+|||+.+++++..+ +..
T Consensus 94 -d------g~i~v~d~~~~~~~~---~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 94 -R------GIIRIINPITMQCIK---HYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp -T------CEEEEECTTTCCEEE---EEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS
T ss_pred -C------CEEEEEEchhceEee---eec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC
Confidence 4 599999998888622 233 245667789998339999999999999999999999999888 346
Q ss_pred cEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeec----------------------------CCcceeEEEEE
Q 011452 235 NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH----------------------------LLHRNKKVDFI 286 (485)
Q Consensus 235 ~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~----------------------------~~~~~~~V~f~ 286 (485)
.|.+++|+|++.++++++. |++|++||+.+++++..+.. |...+..|+|+
T Consensus 163 ~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 240 (366)
T 3k26_A 163 EVLSADYDLLGEKIMSCGM--DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL 240 (366)
T ss_dssp CEEEEEECTTSSEEEEEET--TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC--CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc
Confidence 8999999997666666543 58999999999887765554 88899999997
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCee--------------EEecccCCCceEEEEEcCC--CcEEEEEe-CCcEEEEeCC
Q 011452 287 EQFNEKLLVKQENENLQILDVRNFEL--------------TEVSRTEFMTPSAFIFLYE--NQLFLTFR-NRTVAVWNFR 349 (485)
Q Consensus 287 ~~~~~~lls~s~D~tIkIWDv~tg~~--------------~~~l~gh~~~v~avaFspd--g~llaS~s-D~TIklWd~~ 349 (485)
++.+++++.|++|++||+.++++ +..+.+|...|++++|+|+ +++|++++ |++|++||++
T Consensus 241 ---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 241 ---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLE 317 (366)
T ss_dssp ---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECC
T ss_pred ---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECC
Confidence 67899999999999999998754 8888899999999999999 99999999 9999999996
Q ss_pred -Cc----EEEEeecC--CCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 350 -GE----LVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 350 -G~----ll~tl~gH--~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
++ .+.++.+| ... |++++|+|||++||+++. ||+|+|||+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~s~~~-----------dg~i~iwd~~~ 366 (366)
T 3k26_A 318 VEDPHKAKCTTLTHHKCGAA-----IRQTSFSRDSSILIAVCD-----------DASIWRWDRLR 366 (366)
T ss_dssp SSSGGGCEEEEECCTTCCSC-----EEEEEECTTSSEEEEEET-----------TSEEEEEEC--
T ss_pred CCCCccccceEEcccccCCc-----eEEEEeCCCCCeEEEEeC-----------CCEEEEEEecC
Confidence 65 56689988 445 999999999999999997 79999999864
No 75
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.8e-41 Score=333.14 Aligned_cols=237 Identities=13% Similarity=0.145 Sum_probs=198.7
Q ss_pred ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcC---CceEEEEEcCCCCeeEEEE
Q 011452 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKNVQEIKISP---GIMLLIFTKASGHVPLKIL 262 (485)
Q Consensus 190 ~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~--~l~tl~--~~~V~~VafSp---g~~ll~sss~~~D~tIklW 262 (485)
+|...+..|+|+ |+|++||+|+.|++|||||+.+++ ++.++. ...|++|+|+| +..++ +++ .|++|+||
T Consensus 11 ~H~~~V~~v~~s-~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~-s~s--~D~~v~iW 86 (316)
T 3bg1_A 11 SHEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILA-SCS--YDRKVIIW 86 (316)
T ss_dssp ---CCEEEEEEC-GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEE-EEE--TTSCEEEE
T ss_pred cccCeEEEeeEc-CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEE-EEE--CCCEEEEE
Confidence 355677899998 799999999999999999999875 466775 45899999985 44554 444 45899999
Q ss_pred ecCCC--eEEEEeecCCcceeEEEEEecC-CCEEEEEeCCCcEEEEECCCCe---eEEecccCCCceEEEEEcCC-----
Q 011452 263 SIEDG--TVLKSFNHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNFE---LTEVSRTEFMTPSAFIFLYE----- 331 (485)
Q Consensus 263 di~tG--~~L~tl~~~~~~~~~V~f~~~~-~~~lls~s~D~tIkIWDv~tg~---~~~~l~gh~~~v~avaFspd----- 331 (485)
|+++| +++.++.+|...+.+|+|++.. +..|++++.|++|+|||++++. +...+.+|...|.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99998 4778899999999999997432 5678888999999999999763 35667899999999999998
Q ss_pred ------------CcEEEEEe-CCcEEEEeCC-C---cEEEEeecCCCCCCCCCeeEEEECCCC----CEEEEEecCCCCC
Q 011452 332 ------------NQLFLTFR-NRTVAVWNFR-G---ELVTSFEDHLLWHPDCNTNNIYITSDQ----DLIISYCKADSDD 390 (485)
Q Consensus 332 ------------g~llaS~s-D~TIklWd~~-G---~ll~tl~gH~~~~~~~~v~svafSpDG----~~LaS~s~d~~~d 390 (485)
+++|||++ |++|+|||++ + +++.+|++|..+ |++|+|+|++ ++|||++.
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~-----V~~v~~sp~~~~~~~~las~s~----- 236 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW-----VRDVAWAPSIGLPTSTIASCSQ----- 236 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC-----EEEEECCCCSSCSCCEEEEEET-----
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc-----eEEEEecCCCCCCCceEEEEcC-----
Confidence 57899999 9999999996 4 478899999988 9999999997 89999997
Q ss_pred CCCcCCCCeEEEEeCCCC---e-EEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcC
Q 011452 391 PLAEGNAGSINISNILTG---K-CLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDE 466 (485)
Q Consensus 391 ~~~~~~DgtIklWdl~TG---k-~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fsp 466 (485)
|++|+|||+.++ + +...+.+|. ..|++|+|+|
T Consensus 237 ------D~~v~iw~~~~~~~~~~~~~~~~~~~--------------------------------------~~v~~v~~sp 272 (316)
T 3bg1_A 237 ------DGRVFIWTCDDASSNTWSPKLLHKFN--------------------------------------DVVWHVSWSI 272 (316)
T ss_dssp ------TCEEEEEECSSTTCCCCBCCEEEECS--------------------------------------SCEEEEEECT
T ss_pred ------CCeEEEEEccCccccchhhhhhhcCC--------------------------------------CcEEEEEEcC
Confidence 799999999763 2 233455665 2899999999
Q ss_pred CCCEEEEecCCCcEEEcc
Q 011452 467 DRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 467 Dg~~LaSgs~DgtVklWd 484 (485)
||+.||||+.|++|+||+
T Consensus 273 ~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 273 TANILAVSGGDNKVTLWK 290 (316)
T ss_dssp TTCCEEEEESSSCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEE
Confidence 999999999999999997
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.2e-40 Score=321.71 Aligned_cols=284 Identities=11% Similarity=0.109 Sum_probs=233.9
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCc--EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeE
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQ--RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRS 169 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~--~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t 169 (485)
+..+|.++.|+ +++||+++.|+++++|+.++++ ++.++.+ |...|.+++|+|+|+.|++++. | ++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~----d------g~ 75 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGT----D------RN 75 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEET----T------SC
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEcC----C------Ce
Confidence 34445555555 8999999999999999999887 8888887 8889999999999999999773 3 58
Q ss_pred EEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe---EEEEE---cCCcEEEEEEcC
Q 011452 170 TRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSI---SDKNVQEIKISP 243 (485)
Q Consensus 170 ~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~---~l~tl---~~~~V~~VafSp 243 (485)
+++|++..+++.....+. .+...+..++|+ |+|++|++++.|++|++||+.+++ ....+ +...|.+++|+|
T Consensus 76 i~vwd~~~~~~~~~~~~~--~~~~~v~~~~~~-~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVIL--RINRAARCVRWA-PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp EEEEEEETTEEEEEEECC--CCSSCEEEEEEC-TTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred EEEEECCCCeeeeeEEee--cCCCceeEEEEC-CCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 999999888752211112 234557789998 799999999999999999998876 23444 245899999999
Q ss_pred CceEEEEEcCCCCeeEEEEec------------------CCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEE
Q 011452 244 GIMLLIFTKASGHVPLKILSI------------------EDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQIL 305 (485)
Q Consensus 244 g~~ll~sss~~~D~tIklWdi------------------~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIW 305 (485)
++.++++++ .|++|++||+ .+++++.++.+|...+..++|+ |++..|++++.|++|+||
T Consensus 153 ~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~ 229 (372)
T 1k8k_C 153 NSVLLAAGS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-ANGSRVAWVSHDSTVCLA 229 (372)
T ss_dssp TSSEEEEEE--TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SSSSEEEEEETTTEEEEE
T ss_pred CCCEEEEEc--CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC-CCCCEEEEEeCCCEEEEE
Confidence 776666654 3489999994 5899999999999999999997 678899999999999999
Q ss_pred ECCCCeeEEecccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC---Cc--EE---------------------------
Q 011452 306 DVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR---GE--LV--------------------------- 353 (485)
Q Consensus 306 Dv~tg~~~~~l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~---G~--ll--------------------------- 353 (485)
|+++++++..+.+|...|.+++|+|++++|+++.|++|++||++ |+ ++
T Consensus 230 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
T 1k8k_C 230 DADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 309 (372)
T ss_dssp EGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC
T ss_pred ECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccc
Confidence 99999999999999999999999999999998889999999994 32 11
Q ss_pred ---------EEe-ecCCCCCCCCCeeEEEE-CCCC---CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 354 ---------TSF-EDHLLWHPDCNTNNIYI-TSDQ---DLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 354 ---------~tl-~gH~~~~~~~~v~svaf-SpDG---~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
..+ .+|... |++++| ++|| ++|+|++. ||+|+|||+.+++.
T Consensus 310 ~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~g~~~~~l~s~~~-----------Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 310 SSEGSAAAGAGLDSLHKNS-----VSQISVLSGGKAKCSQFCTTGM-----------DGGMSIWDVRSLES 364 (372)
T ss_dssp ---------CCCSSSSSSC-----EEEEEEEESTTTSCSEEEEEET-----------TSEEEEEEHHHHHH
T ss_pred ccccCccccccccccccCC-----cceeEEecCCCcceeeEEEecC-----------CCceEEEEecChhH
Confidence 223 378766 999985 4788 99999997 79999999987654
No 77
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=321.89 Aligned_cols=291 Identities=11% Similarity=0.077 Sum_probs=220.8
Q ss_pred cccceEEEEEe---cCEEEEEeCCCeEEeeecccCcEEEEee------------cCCcccEEEEEEee-CCCEEEEEEee
Q 011452 94 KRSKIIEIVAA---RDIVFALAQSGVCAAFCRETNQRICFLN------------VTADEVIRSLFYNK-NNDSLITVSVY 157 (485)
Q Consensus 94 ~~s~V~~i~~s---~~~ias~s~dgtiklW~~~tG~~l~tl~------------g~~~~~i~sv~~sp-dg~~Las~S~d 157 (485)
|..+|.+|+|+ +++||+++.||+|++|++.+++.+..+. ..|...|.+++|+| +++.|++++.
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~- 120 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF- 120 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET-
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC-
Confidence 34444444443 7999999999999999999988776654 24888999999999 7788988763
Q ss_pred cCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeC--CCCeEEEEeeCCCcEEEeecCCCeEEEEEc--C
Q 011452 158 ASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDD--VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--D 233 (485)
Q Consensus 158 ~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~--pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~ 233 (485)
| +++++|++..++.. ..+.. ...+..+.|++ +++.+|++++.|++|++||+.+++++.++. .
T Consensus 121 ---d------~~i~iwd~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 186 (408)
T 4a11_B 121 ---D------KTLKVWDTNTLQTA---DVFNF--EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR 186 (408)
T ss_dssp ---T------SEEEEEETTTTEEE---EEEEC--SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC
T ss_pred ---C------CeEEEeeCCCCccc---eeccC--CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC
Confidence 3 59999999888762 23332 33455788863 256699999999999999999999888886 4
Q ss_pred CcEEEEEEcCCce-EEEEEcCCCCeeEEEEecCCCe-EEEEe---------------ecCCcceeEEEEEecCCCEEEEE
Q 011452 234 KNVQEIKISPGIM-LLIFTKASGHVPLKILSIEDGT-VLKSF---------------NHLLHRNKKVDFIEQFNEKLLVK 296 (485)
Q Consensus 234 ~~V~~VafSpg~~-ll~sss~~~D~tIklWdi~tG~-~L~tl---------------~~~~~~~~~V~f~~~~~~~lls~ 296 (485)
..|.+++|+|++. ++++++ .|++|++||+.+++ ++..+ .+|...+..++|+ |++..|+++
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~ 263 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATAS--ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTV 263 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEE--TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC-TTSSEEEEE
T ss_pred CcEEEEEECCCCCcEEEEEc--CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc-CCCCEEEEe
Confidence 5899999998664 454444 45899999998887 56666 5677889999997 678899999
Q ss_pred eCCCcEEEEECCCCeeEEecccC------CCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCCCCCCee
Q 011452 297 QENENLQILDVRNFELTEVSRTE------FMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTN 369 (485)
Q Consensus 297 s~D~tIkIWDv~tg~~~~~l~gh------~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~~~~v~ 369 (485)
+.|++|++||+.+++......++ ......+...+.+.+++++.|++|++||+. ++++.++.+|... |.
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-----v~ 338 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT-----VD 338 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC-----EE
T ss_pred cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe-----EE
Confidence 99999999999999876655433 112222333445555555449999999996 9999999999877 99
Q ss_pred EEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 370 NIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 370 svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
+++|+|||++|++++. ||+|+|||+.+++.+.....+.
T Consensus 339 ~~~~s~~~~~l~s~~~-----------dg~i~iw~~~~~~~~~~~~~~~ 376 (408)
T 4a11_B 339 CCVFQSNFQELYSGSR-----------DCNILAWVPSLYEPVPDDDETT 376 (408)
T ss_dssp EEEEETTTTEEEEEET-----------TSCEEEEEECC-----------
T ss_pred EEEEcCCCCEEEEECC-----------CCeEEEEeCCCCCccCCCCceE
Confidence 9999999999999997 7999999999999887665543
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-41 Score=334.65 Aligned_cols=236 Identities=11% Similarity=0.036 Sum_probs=188.7
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccC--CcCcccceeeeccccCceEEEEeCCCCeEEEEee
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRG--KPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA 212 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G--~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s 212 (485)
+...|++++|+|||+.||+++ .| ++++||++..+ ++. ..+. .+...+..++|+ |+|++|++++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~----~d------~~i~iw~~~~~~~~~~---~~~~-~h~~~v~~~~~s-~~~~~l~s~s 74 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTT----AT------NQVELYEQDGNGWKHA---RTFS-DHDKIVTCVDWA-PKSNRIVTCS 74 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCC----SS------SCBCEEEEETTEEEEC---CCBC-CCSSCEEEEEEC-TTTCCEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEec----CC------CEEEEEEccCCceEEE---EEEe-cCCceEEEEEEe-CCCCEEEEEe
Confidence 556899999999999999865 34 58999999877 332 1232 245667789998 7999999999
Q ss_pred CCCcEEEeecCCCe---EEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCe---EEEEeec-CCcceeEE
Q 011452 213 QDSIYKVFDLKNYT---MLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGT---VLKSFNH-LLHRNKKV 283 (485)
Q Consensus 213 ~D~tiKlWdl~~g~---~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~---~L~tl~~-~~~~~~~V 283 (485)
.|++|+|||+.+++ ++..+. ...|.+++|+|++.++++++. |++|+|||+++++ +++.+.+ |...+..+
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG--ARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES--SSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec--CCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 99999999999877 555554 468999999997666555543 5899999999998 4888988 99999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECC------------------CCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEE
Q 011452 284 DFIEQFNEKLLVKQENENLQILDVR------------------NFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVA 344 (485)
Q Consensus 284 ~f~~~~~~~lls~s~D~tIkIWDv~------------------tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIk 344 (485)
+|+ |++..|++++.|++|+|||++ +++++..+ +|...|.+++|+|+|++|++++ |++|+
T Consensus 153 ~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 230 (377)
T 3dwl_C 153 DWH-PNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVT 230 (377)
T ss_dssp EEC-TTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC
T ss_pred EEc-CCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEE
Confidence 997 678889999999999999995 46788888 9999999999999999999999 99999
Q ss_pred EEeCC-CcE----EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC
Q 011452 345 VWNFR-GEL----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 345 lWd~~-G~l----l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
|||++ +++ +.++.+|... |.+++|+|||++|++++. |+.+ +|+..
T Consensus 231 iwd~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~-----------~~~~-~~~~~ 280 (377)
T 3dwl_C 231 IAYPSAPEQPPRALITVKLSQLP-----LRSLLWANESAIVAAGYN-----------YSPI-LLQGN 280 (377)
T ss_dssp -CEECSTTSCEEECCCEECSSSC-----EEEEEEEETTEEEEEESS-----------SSEE-EECCC
T ss_pred EEECCCCCCcceeeEeecCCCCc-----eEEEEEcCCCCEEEEEcC-----------CcEE-EEEeC
Confidence 99996 877 8899999987 999999999999999874 4655 66654
No 79
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.2e-39 Score=327.12 Aligned_cols=294 Identities=10% Similarity=0.121 Sum_probs=233.9
Q ss_pred cccccccccceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEeec-CCcccEEEEEEeeCCCEEEEEEeecCCCCccc
Q 011452 88 VLPFLRKRSKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNV-TADEVIRSLFYNKNNDSLITVSVYASDNFSSL 165 (485)
Q Consensus 88 ~~~~~~~~s~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g-~~~~~i~sv~~spdg~~Las~S~d~~~d~stL 165 (485)
-.|.|+...-+.-|.++ +++||++. |++|+|||..+|+++..+.. .|...|.+|+|+|||++||+++. |
T Consensus 98 ~ap~~~~d~y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~----D---- 168 (420)
T 4gga_A 98 DAPEIRNDYYLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS----S---- 168 (420)
T ss_dssp ECTTCCCCTTCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET----T----
T ss_pred ECCCCcccccceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC----C----
Confidence 45666666556667888 77777665 99999999999998887764 36778999999999999999774 4
Q ss_pred ceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe-EEEEEc--CCcEEEEEEc
Q 011452 166 RCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKNVQEIKIS 242 (485)
Q Consensus 166 ~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~-~l~tl~--~~~V~~VafS 242 (485)
++++||++.+|++.. .+. .+...+..+++ |+.+|++|+.|+++++||..... .+.++. ...|..+.++
T Consensus 169 --g~v~iWd~~~~~~~~---~~~-~h~~~v~~~s~---~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~ 239 (420)
T 4gga_A 169 --AEVQLWDVQQQKRLR---NMT-SHSARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA 239 (420)
T ss_dssp --SCEEEEETTTTEEEE---EEC-CCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred --CeEEEEEcCCCcEEE---EEe-CCCCceEEEee---CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeec
Confidence 599999999887621 222 23444445555 57899999999999999988654 556664 4689999999
Q ss_pred CCceEEEEEcCCCCeeEEEEecCCCe----EEEEeecCCcceeEEEEEecCCCEEEEE--eCCCcEEEEECCCCeeEEec
Q 011452 243 PGIMLLIFTKASGHVPLKILSIEDGT----VLKSFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTEVS 316 (485)
Q Consensus 243 pg~~ll~sss~~~D~tIklWdi~tG~----~L~tl~~~~~~~~~V~f~~~~~~~lls~--s~D~tIkIWDv~tg~~~~~l 316 (485)
|++.++++++ .|+.|+||++.+|+ .+..+..|...+..++|++.....++++ +.|++|+|||+.+++++..+
T Consensus 240 ~~g~~l~s~~--~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 240 PDGRHLASGG--NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp TTSSEEEEEE--TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE
T ss_pred CCCCeeeeee--ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee
Confidence 8766666654 45899999999886 4577888889999999985545555553 48999999999999999998
Q ss_pred ccCCCceEEEEEcCCCcEEEEEe---CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCC
Q 011452 317 RTEFMTPSAFIFLYENQLFLTFR---NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPL 392 (485)
Q Consensus 317 ~gh~~~v~avaFspdg~llaS~s---D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~ 392 (485)
..|. .+.+++|+|+++.|++++ |++|+|||+. ++++.+|.||... |++|+|||||++|||||.
T Consensus 318 ~~~~-~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~-----V~~l~~spdg~~l~S~s~------- 384 (420)
T 4gga_A 318 DAHS-QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-----VLSLTMSPDGATVASAAA------- 384 (420)
T ss_dssp ECSS-CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-----EEEEEECTTSSCEEEEET-------
T ss_pred cccc-ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC-----EEEEEEcCCCCEEEEEec-------
Confidence 7665 788999999999888763 8999999996 9999999999987 999999999999999997
Q ss_pred CcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 393 AEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 393 ~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
|++|||||+.+..+..+.+.|.
T Consensus 385 ----D~tvriWdv~~~~~~~~~~~~~ 406 (420)
T 4gga_A 385 ----DETLRLWRCFELDPARRREREK 406 (420)
T ss_dssp ----TTEEEEECCSCSSCC-------
T ss_pred ----CCeEEEEECCCCCccchhhhcc
Confidence 7999999998877766665554
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=316.74 Aligned_cols=284 Identities=10% Similarity=0.094 Sum_probs=227.0
Q ss_pred cccceEEEEEe--c-CEEEEEeC---CCeEEeeecccCcEEEEeecCCcccEEEEEEeeC---CCEEEEEEeecCCCCcc
Q 011452 94 KRSKIIEIVAA--R-DIVFALAQ---SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKN---NDSLITVSVYASDNFSS 164 (485)
Q Consensus 94 ~~s~V~~i~~s--~-~~ias~s~---dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spd---g~~Las~S~d~~~d~st 164 (485)
|..+|.+|.|+ + .++++++. ||++++|++.+++........|...|.+++|+|+ |+.|++++. |
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----d--- 89 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF----G--- 89 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET----T---
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC----C---
Confidence 55666666666 5 45667776 9999999999999877666568889999999999 699998773 3
Q ss_pred cceeEEEEeEeccCC-cCcccceeeeccccCceEEE------EeCCCCeEEEEeeCCCcEEEeecCCCe-EEEEEc---C
Q 011452 165 LRCRSTRIEYIRRGK-PDAGFALFESESLKWPGFVE------FDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS---D 233 (485)
Q Consensus 165 L~~~t~~lw~i~~G~-~~~~~~lf~~~~~~~~~~V~------Fs~pnG~~Las~s~D~tiKlWdl~~g~-~l~tl~---~ 233 (485)
+++++|++..++ +. ..+. .+...+..++ |+ |+|++|++++.|++|+|||+.+++ .+.++. +
T Consensus 90 ---g~i~iwd~~~~~~~~---~~~~-~~~~~v~~~~~~~~~~~s-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 90 ---GNLHIWNLEAPEMPV---YSVK-GHKEIINAIDGIGGLGIG-EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG 161 (357)
T ss_dssp ---SCEEEECTTSCSSCS---EEEC-CCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT
T ss_pred ---CeEEEEeCCCCCccE---EEEE-ecccceEEEeeccccccC-CCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC
Confidence 589999998887 42 1232 2445566674 44 799999999999999999999887 666663 2
Q ss_pred ---CcEEEEE----EcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEec--CCCEEEEEeCCCcEEE
Q 011452 234 ---KNVQEIK----ISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQ--FNEKLLVKQENENLQI 304 (485)
Q Consensus 234 ---~~V~~Va----fSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~--~~~~lls~s~D~tIkI 304 (485)
..|++++ |+|++.++++++. |++|++||+++++++.. ..|...+..++|++. ++..+++++.|++|+|
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 162 ENKRDCWTVAFGNAYNQEERVVCAGYD--NGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp SCCCCEEEEEEECCCC-CCCEEEEEET--TSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred CCCCceEEEEEEeccCCCCCEEEEEcc--CCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 2799998 6776666666543 48999999999998655 456788999999732 7889999999999999
Q ss_pred EECCCCeeEEecc-----cCCCceEEEEEcCCCc-EEEEEe-CCcEEEEeCC-C-------------------cEEEEee
Q 011452 305 LDVRNFELTEVSR-----TEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-G-------------------ELVTSFE 357 (485)
Q Consensus 305 WDv~tg~~~~~l~-----gh~~~v~avaFspdg~-llaS~s-D~TIklWd~~-G-------------------~ll~tl~ 357 (485)
||+++++++..+. +|...|.+++|+|+++ +|++++ |++|+|||++ + +++.++.
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 318 (357)
T 3i2n_A 239 FDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT 318 (357)
T ss_dssp EEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE
T ss_pred EeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc
Confidence 9999988766554 8999999999999999 899999 9999999985 3 4788999
Q ss_pred cCCCCCCCCCeeEEEECCCCCEEE-EEecCCCCCCCCcCCCCeEEEEeCCCCeEE
Q 011452 358 DHLLWHPDCNTNNIYITSDQDLII-SYCKADSDDPLAEGNAGSINISNILTGKCL 411 (485)
Q Consensus 358 gH~~~~~~~~v~svafSpDG~~La-S~s~d~~~d~~~~~~DgtIklWdl~TGk~l 411 (485)
+|... |.+++|+|||++|+ |++. |++|+|||+.+.++|
T Consensus 319 ~~~~~-----v~~~~~s~~~~~l~~s~~~-----------d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 319 LSTQP-----ISSLDWSPDKRGLCVCSSF-----------DQTVRVLIVTKLNKI 357 (357)
T ss_dssp CCSSC-----EEEEEECSSSTTEEEEEET-----------TSEEEEEEECC----
T ss_pred cCCCC-----eeEEEEcCCCCeEEEEecC-----------CCcEEEEECCCcccC
Confidence 99877 99999999999998 7886 799999999876653
No 81
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-38 Score=303.35 Aligned_cols=276 Identities=15% Similarity=0.132 Sum_probs=227.2
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEE---Eeec-CCcccEEEEEEeeCCCEEEEEEeecCCCCcccce
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRIC---FLNV-TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRC 167 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~---tl~g-~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~ 167 (485)
|..+|..+.|+ +++|++++ ||++++|++.+++... ++.. .|...|.+++|+|+|+.|++++. |
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d------ 118 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE----A------ 118 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----S------
T ss_pred CCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC----C------
Confidence 45555555555 89999999 9999999999876433 3331 47889999999999999999773 3
Q ss_pred eEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCc
Q 011452 168 RSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGI 245 (485)
Q Consensus 168 ~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~ 245 (485)
+++++|++..++... ...+. .+...+..++|+ |+|++|++++.|++|++||+.+++++.++. ...|.+++|+|++
T Consensus 119 ~~i~~~d~~~~~~~~-~~~~~-~~~~~i~~~~~~-~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 119 STLSIWDLAAPTPRI-KAELT-SSAPACYALAIS-PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp SEEEEEECCCC--EE-EEEEE-CSSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred CcEEEEECCCCCcce-eeecc-cCCCceEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCC
Confidence 599999998877411 11122 234456689998 799999999999999999999999998886 4589999999976
Q ss_pred eEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEE
Q 011452 246 MLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSA 325 (485)
Q Consensus 246 ~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~a 325 (485)
.++++++ .|++|++||+++++++..+. |...+..++|+ |++..+++++.|++|++||+++++.. .+.+|...|.+
T Consensus 196 ~~l~~~~--~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s-~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~ 270 (337)
T 1gxr_A 196 TKLWTGG--LDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC-PTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLS 270 (337)
T ss_dssp SEEEEEE--TTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEE
T ss_pred CEEEEEe--cCCcEEEEECCCCceEeeec-CCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeE
Confidence 6555544 35899999999999999886 45788999996 77889999999999999999998875 45689999999
Q ss_pred EEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEE
Q 011452 326 FIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINIS 403 (485)
Q Consensus 326 vaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklW 403 (485)
++|+|++++|++++ |++|++||++ ++++..+ .|... |.+++|+|||++|++++. ||+|+||
T Consensus 271 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~-----v~~~~~s~~~~~l~~~~~-----------dg~i~iw 333 (337)
T 1gxr_A 271 LKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSS-----VLSCDISVDDKYIVTGSG-----------DKKATVY 333 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSC-----EEEEEECTTSCEEEEEET-----------TSCEEEE
T ss_pred EEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCc-----EEEEEECCCCCEEEEecC-----------CCeEEEE
Confidence 99999999999999 9999999996 8877554 46555 999999999999999987 7999999
Q ss_pred eC
Q 011452 404 NI 405 (485)
Q Consensus 404 dl 405 (485)
|+
T Consensus 334 ~~ 335 (337)
T 1gxr_A 334 EV 335 (337)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=309.43 Aligned_cols=299 Identities=13% Similarity=0.067 Sum_probs=235.8
Q ss_pred eEEeeecccCcEEEEeecCCcccEEEEEEeeC---CCEEEEEEeecCCCCcccceeEEEEeEecc-CCcCcccceeeecc
Q 011452 116 VCAAFCRETNQRICFLNVTADEVIRSLFYNKN---NDSLITVSVYASDNFSSLRCRSTRIEYIRR-GKPDAGFALFESES 191 (485)
Q Consensus 116 tiklW~~~tG~~l~tl~g~~~~~i~sv~~spd---g~~Las~S~d~~~d~stL~~~t~~lw~i~~-G~~~~~~~lf~~~~ 191 (485)
.+..|+....+.+..+.+ |.+.|.+|+|+|+ |+.||+++. | ++++||++.. ++... ..+. .+
T Consensus 20 ~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~g~~l~~~~~----d------g~i~iw~~~~~~~~~~--~~~~-~h 85 (368)
T 3mmy_A 20 SATTDNHNPMKDIEVTSS-PDDSIGCLSFSPPTLPGNFLIAGSW----A------NDVRCWEVQDSGQTIP--KAQQ-MH 85 (368)
T ss_dssp ---CCSSCTTCCEECSSC-CSSCEEEEEECCTTSSSEEEEEEET----T------SEEEEEEECTTSCEEE--EEEE-EC
T ss_pred EeccCCCCCcceeEeccC-CCCceEEEEEcCCCCCceEEEEECC----C------CcEEEEEcCCCCceeE--EEec-cc
Confidence 344556666777777776 8889999999999 699999774 4 5999999977 44310 1222 34
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE-cCCcEEEEEE--cCCceEEEEEcCCCCeeEEEEecCCCe
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-SDKNVQEIKI--SPGIMLLIFTKASGHVPLKILSIEDGT 268 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl-~~~~V~~Vaf--Spg~~ll~sss~~~D~tIklWdi~tG~ 268 (485)
...+..++|+ |+|++|++++.|++|+|||+.+++++... +...|.+++| +|++.++++++. |++|++||+++++
T Consensus 86 ~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 86 TGPVLDVCWS-DDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW--DKTLKFWDTRSSN 162 (368)
T ss_dssp SSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEET--TSEEEEECSSCSS
T ss_pred cCCEEEEEEC-cCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccC--CCcEEEEECCCCc
Confidence 5667789998 79999999999999999999999977655 4678999999 887776666543 4899999999999
Q ss_pred EEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE--ecccCCCceEEEEEcCCCcE----EEEEe-CC
Q 011452 269 VLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE--VSRTEFMTPSAFIFLYENQL----FLTFR-NR 341 (485)
Q Consensus 269 ~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~--~l~gh~~~v~avaFspdg~l----laS~s-D~ 341 (485)
++.++..+ ..+..+.+. +..+++++.|+++++||+++..... ....+...+..+++.++... +++++ |+
T Consensus 163 ~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg 238 (368)
T 3mmy_A 163 PMMVLQLP-ERCYCADVI---YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG 238 (368)
T ss_dssp CSEEEECS-SCEEEEEEE---TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS
T ss_pred EEEEEecC-CCceEEEec---CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC
Confidence 99999976 355566654 4688889999999999999764322 22334456666777666554 88998 99
Q ss_pred cEEEEeCC-C---cEEEEeecCCCCCC-------CCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 342 TVAVWNFR-G---ELVTSFEDHLLWHP-------DCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 342 TIklWd~~-G---~ll~tl~gH~~~~~-------~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
+|++||++ + +++.++.+|..... ...|.+++|+|||++|++++. ||+|+|||+.++++
T Consensus 239 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-----------dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 239 RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGS-----------DGRFSFWDKDARTK 307 (368)
T ss_dssp EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEET-----------TSCEEEEETTTTEE
T ss_pred cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEcc-----------CCeEEEEECCCCcE
Confidence 99999996 5 67889999875100 001899999999999999997 79999999999999
Q ss_pred EEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 411 LAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 411 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
+.++.+|.. .|++|+|+|||+.||+||.|+.++.|+
T Consensus 308 ~~~~~~~~~--------------------------------------~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 308 LKTSEQLDQ--------------------------------------PISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp EEECCCCSS--------------------------------------CEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred EEEecCCCC--------------------------------------CceEEEECCCCCeEEEEeccccccccc
Confidence 999999973 899999999999999999998776664
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.4e-38 Score=320.67 Aligned_cols=278 Identities=13% Similarity=0.158 Sum_probs=233.6
Q ss_pred EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCe
Q 011452 127 RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGK 206 (485)
Q Consensus 127 ~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~ 206 (485)
...++.+++...+.++.| +++.|+++|. | ++++||++.+|++.. .+. +|...+..++|+ |++
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~----d------g~i~vwd~~~~~~~~---~~~-~h~~~V~~l~~~-~~~- 174 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGAD----D------KMIRVYDSINKKFLL---QLS-GHDGGVWALKYA-HGG- 174 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEET----T------SCEEEEETTTTEEEE---EEC-CCSSCEEEEEEC-STT-
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcC----C------CcEEEEECCCCcEEE---EEe-CCCcCEEEEEEc-CCC-
Confidence 455777744555676666 5679999774 4 599999998888622 222 355677889997 677
Q ss_pred EEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEc--CCceEEEEEcCCCCeeEEEEecCCCe--------------
Q 011452 207 VLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKIS--PGIMLLIFTKASGHVPLKILSIEDGT-------------- 268 (485)
Q Consensus 207 ~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafS--pg~~ll~sss~~~D~tIklWdi~tG~-------------- 268 (485)
+|++|+.|++|+|||+.+++++.++. ...|.+++|+ |++.++++++ .|++|++||+.+++
T Consensus 175 ~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s--~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS--RDNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE--TTSCEEEEECCCCCCC------CCSSEE
T ss_pred EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEc--CCCcEEEeeCCCCcccccccccCCcceE
Confidence 89999999999999999999999986 4589999999 4656666654 35899999999887
Q ss_pred ---------EEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe
Q 011452 269 ---------VLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 269 ---------~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s 339 (485)
++.++.+|...+..+. +++..+++++.|++|++||+++++++..+.+|...|.+++|+|++++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVS---GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEE---EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred eeccCCCeEEEEEccCccceEEEEc---CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe
Confidence 3667888877777764 5688999999999999999999999999999999999999999999999999
Q ss_pred -CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 340 -NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 340 -D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
|++|++||++ |+++.++.+|... |..++|+ +++|+|++. ||+|++||+.+++++..+. |
T Consensus 330 ~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~--~~~l~s~s~-----------dg~v~vwd~~~~~~~~~~~-~ 390 (464)
T 3v7d_B 330 MDTTIRIWDLENGELMYTLQGHTAL-----VGLLRLS--DKFLVSAAA-----------DGSIRGWDANDYSRKFSYH-H 390 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSC-----EEEEEEC--SSEEEEEET-----------TSEEEEEETTTCCEEEEEE-C
T ss_pred CCCcEEEEECCCCcEEEEEeCCCCc-----EEEEEEc--CCEEEEEeC-----------CCcEEEEECCCCceeeeec-C
Confidence 9999999996 9999999999987 9999997 589999997 7999999999998877764 3
Q ss_pred CCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 418 NGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
. ..+..++|+|+++.|++|+ |++|+|||.
T Consensus 391 ~--------------------------------------~~~~~~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 391 T--------------------------------------NLSAITTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp T--------------------------------------TCCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred C--------------------------------------CCccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence 2 1667789999999999999 999999984
No 84
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.2e-39 Score=320.64 Aligned_cols=303 Identities=9% Similarity=0.078 Sum_probs=215.4
Q ss_pred eeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEE
Q 011452 119 AFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFV 198 (485)
Q Consensus 119 lW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V 198 (485)
+|++.+.+.+.+++. |...|++|+|||||+.||+++ ++ .++||++..++. ++.. ....+..+
T Consensus 3 i~s~~~~~~~~~~~~-h~~~V~~v~fs~dg~~la~g~----~~-------~~~iw~~~~~~~-----~~~~-~~~~~~~~ 64 (355)
T 3vu4_A 3 LGSMITRNPIVPENH-VSNPVTDYEFNQDQSCLILST----LK-------SFEIYNVHPVAH-----IMSQ-EMRHLSKV 64 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEEC----SS-------EEEEEEETTEEE-----EEEE-ECSCCCEE
T ss_pred cccccccCCcccccc-CCCceEEEEECCCCCEEEEEc----CC-------EEEEEecCCcce-----eeee-ecCCeEEE
Confidence 566777888877776 888999999999999998855 44 578999876654 2322 22345678
Q ss_pred EEeCCCCeEE-EEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCC-eEEEEeec
Q 011452 199 EFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDG-TVLKSFNH 275 (485)
Q Consensus 199 ~Fs~pnG~~L-as~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG-~~L~tl~~ 275 (485)
+|. +++..+ ++++.|++|+|||+.+++++.++. ...|.+|+|+|+..+++. |++|+|||+.++ ++++++..
T Consensus 65 ~~~-~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-----~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 65 RML-HRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSY-----GDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp EEC-TTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEE-----TTEEEEEESSTTCCBSSCCEE
T ss_pred EEc-CCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEE-----cCEEEEEECCCCceeeEEecc
Confidence 887 566665 567889999999999999998886 468999999998765543 368999999999 88877774
Q ss_pred CCcceeEEEEEecCCCEEEEE--eCCCcEEEEECCCCe----------------eEEecccCCCceEEEEEcCCCcEEEE
Q 011452 276 LLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFE----------------LTEVSRTEFMTPSAFIFLYENQLFLT 337 (485)
Q Consensus 276 ~~~~~~~V~f~~~~~~~lls~--s~D~tIkIWDv~tg~----------------~~~~l~gh~~~v~avaFspdg~llaS 337 (485)
....++|+ + ..++++ +.|++|+|||+.+++ ++.++.+|...|++++|+|||++|||
T Consensus 139 ---~~~~~~~s-~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 139 ---FGGVCEFS-N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp ---EEEEEEEE-T--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ---CCceEEEE-c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 33455554 3 677774 699999999999876 37888999999999999999999999
Q ss_pred Ee-CCc-EEEEeCC-CcEEEEee-c-CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE--
Q 011452 338 FR-NRT-VAVWNFR-GELVTSFE-D-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC-- 410 (485)
Q Consensus 338 ~s-D~T-IklWd~~-G~ll~tl~-g-H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~-- 410 (485)
++ |++ |+|||++ |+++.+|. + |... |++++|+|||++|++++. |++|+|||+.++..
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~-----v~~~~~s~~~~~l~s~s~-----------d~~v~iw~~~~~~~~~ 276 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRGLDRAD-----VVDMKWSTDGSKLAVVSD-----------KWTLHVFEIFNDQDNK 276 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECTTCCSC-----EEEEEECTTSCEEEEEET-----------TCEEEEEESSCCSCCC
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCCCCc-----EEEEEECCCCCEEEEEEC-----------CCEEEEEEccCCCCcc
Confidence 99 999 9999996 99999999 6 8877 999999999999999997 79999999986531
Q ss_pred EEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 411 LAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 411 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
...+.++- .+.++.. ......+... ......+..++|+|||+.|++|+.||++++|+
T Consensus 277 ~~~~~~~~-~~~~~~~----~~~~~~~~~~------------~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 277 RHALKGWI-NMKYFQS----EWSLCNFKLS------------VDKHVRGCKIAWISESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp SEETTTTE-ECCCCCC----SSCSEEEECC------------CCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred ccccccee-ecccccc----ccceeEEEec------------cCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 12222210 0000000 0000000000 00001346799999999999999999999997
No 85
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-41 Score=359.07 Aligned_cols=266 Identities=12% Similarity=0.080 Sum_probs=206.1
Q ss_pred cCcEEEEeecCCcccEEEEEEeeCC---------CEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccC
Q 011452 124 TNQRICFLNVTADEVIRSLFYNKNN---------DSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKW 194 (485)
Q Consensus 124 tG~~l~tl~g~~~~~i~sv~~spdg---------~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~ 194 (485)
++++..+++ +.+.|++|+|+|++ ++||+++.. + +. .
T Consensus 123 ~~r~~~~~~--~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~---~----------------~~----------~---- 167 (524)
T 2j04_B 123 GKRRGFIYN--VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQ---Y----------------MD----------E---- 167 (524)
T ss_dssp CCSCEEEEE--CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-------------------------------------
T ss_pred CCcceEEEE--CCCceeEEEecccCCCCccCcCCeEEEEEEec---c----------------cC----------C----
Confidence 355555665 45689999999998 788886631 1 00 0
Q ss_pred ceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE----EEEEc--CCcEEEEEEcCC------ceEEEEEcCCCCeeEEEE
Q 011452 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM----LYSIS--DKNVQEIKISPG------IMLLIFTKASGHVPLKIL 262 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~----l~tl~--~~~V~~VafSpg------~~ll~sss~~~D~tIklW 262 (485)
.++ |++++|||++.|++|||||+.++++ ..++. ...|+.|+|+|+ +.+|++++ .|++||||
T Consensus 168 ----~~~-~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s--~DgtvrlW 240 (524)
T 2j04_B 168 ----PLN-EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVS--QEGTINFL 240 (524)
T ss_dssp -------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEE--TTSCEEEE
T ss_pred ----ccc-hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEe--cCCeEEEE
Confidence 123 7999999999999999999988764 23443 467999999985 34555544 35899999
Q ss_pred ecCCCeE-----------EEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCe-eEEecccCCCceEEE--EE
Q 011452 263 SIEDGTV-----------LKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFE-LTEVSRTEFMTPSAF--IF 328 (485)
Q Consensus 263 di~tG~~-----------L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~-~~~~l~gh~~~v~av--aF 328 (485)
|+.++++ ..++.+|...+.+|+|++ ++.|++++.|++|+|||+++++ +..++.+|...|.+| +|
T Consensus 241 d~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~--~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~ 318 (524)
T 2j04_B 241 EIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS--PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAY 318 (524)
T ss_dssp ECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS--SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEEC
T ss_pred EcCCCccccccceeecCceEEEEcCCCCEEEEEecC--CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEc
Confidence 9988753 247889999999999974 4589999999999999999874 456788999999999 68
Q ss_pred cCCC-cEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeC
Q 011452 329 LYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNI 405 (485)
Q Consensus 329 spdg-~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl 405 (485)
+|+| ++|||++ |+||||||++ ++++.++.+|... ..|++|+|+|||+.||+++. |++|||||+
T Consensus 319 s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~---~~v~~v~fsp~~~~l~s~~~-----------d~tv~lwd~ 384 (524)
T 2j04_B 319 SDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG---SNLVPVVYCPQIYSYIYSDG-----------ASSLRAVPS 384 (524)
T ss_dssp CTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC---CSCCCEEEETTTTEEEEECS-----------SSEEEEEET
T ss_pred CCCCCeEEEEeccCCeEEEEECCCCCccccccccccc---CcccceEeCCCcCeEEEeCC-----------CCcEEEEEC
Confidence 9998 9999999 9999999996 8888889888642 12789999999999999886 799999999
Q ss_pred CCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 406 LTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 406 ~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.+++|+.++.+|.+ .|++|+|||||+.|+|||.|++|+|||.
T Consensus 385 ~~~~~~~~l~gH~~--------------------------------------~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 385 RAAFAVHPLVSRET--------------------------------------TITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp TCTTCCEEEEECSS--------------------------------------CEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred cccccceeeecCCC--------------------------------------ceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 99999999999983 8999999999999999999999999983
No 86
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=299.61 Aligned_cols=271 Identities=10% Similarity=0.114 Sum_probs=216.0
Q ss_pred EEEe-cCEEEEEeCCCeEEeeecccCcEEEEeec-CCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccC
Q 011452 101 IVAA-RDIVFALAQSGVCAAFCRETNQRICFLNV-TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRG 178 (485)
Q Consensus 101 i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g-~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G 178 (485)
|.+| +.+||++ .|++|+|||.++|+++.++.. +|...|.+|+|+|+|+.||++|. | ++++||++.+|
T Consensus 31 l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~----D------g~v~iw~~~~~ 99 (318)
T 4ggc_A 31 VDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS----S------AEVQLWDVQQQ 99 (318)
T ss_dssp EEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET----T------SEEEEEETTTT
T ss_pred EEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC----C------CcEEEeecCCc
Confidence 4455 4677665 599999999999999998864 37778999999999999999774 4 59999999998
Q ss_pred CcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe-EEEEEc--CCcEEEEEEcCCceEEEEEcCCC
Q 011452 179 KPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKNVQEIKISPGIMLLIFTKASG 255 (485)
Q Consensus 179 ~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~-~l~tl~--~~~V~~VafSpg~~ll~sss~~~ 255 (485)
++.. .+. .+... ...++ +++++|++++.|+++++|+..++. .+.++. ...+..++|++.+.++++++ .
T Consensus 100 ~~~~---~~~-~h~~~--~~~~~-~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~--~ 170 (318)
T 4ggc_A 100 KRLR---NMT-SHSAR--VGSLS-WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG--N 170 (318)
T ss_dssp EEEE---EEE-CCSSC--EEEEE-EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE--T
T ss_pred eeEE---Eec-Cccce--EEEee-cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEe--c
Confidence 8622 222 23232 33444 467899999999999999998765 555554 46899999998666666654 4
Q ss_pred CeeEEEEecCCCeE----EEEeecCCcceeEEEEEecCCCEEEE--EeCCCcEEEEECCCCeeEEecccCCCceEEEEEc
Q 011452 256 HVPLKILSIEDGTV----LKSFNHLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNFELTEVSRTEFMTPSAFIFL 329 (485)
Q Consensus 256 D~tIklWdi~tG~~----L~tl~~~~~~~~~V~f~~~~~~~lls--~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFs 329 (485)
|++|+|||+++|+. +.....|.+.+..+++.+..+..+.. ++.|++|+|||.+++...... .|...+..+.|+
T Consensus 171 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~ 249 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWS 249 (318)
T ss_dssp TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEE
T ss_pred CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeec
Confidence 58999999998874 35556677888899997443443333 358999999999998887776 466689999999
Q ss_pred CCCcEEEEE--e-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeC
Q 011452 330 YENQLFLTF--R-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNI 405 (485)
Q Consensus 330 pdg~llaS~--s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl 405 (485)
|+++.++++ + |++|+|||++ |+++.+|++|... |++|+|+|||++|||+|. ||+|||||+
T Consensus 250 ~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~-----V~~l~~spdg~~l~S~s~-----------D~~v~iWd~ 313 (318)
T 4ggc_A 250 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-----VLSLTMSPDGATVASAAA-----------DETLRLWRC 313 (318)
T ss_dssp TTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-----EEEEEECTTSSCEEEEET-----------TTEEEEECC
T ss_pred ccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC-----EEEEEEcCCCCEEEEEec-----------CCeEEEEEC
Confidence 999988765 3 8999999996 9999999999988 999999999999999997 799999998
Q ss_pred CCC
Q 011452 406 LTG 408 (485)
Q Consensus 406 ~TG 408 (485)
.+.
T Consensus 314 ~~~ 316 (318)
T 4ggc_A 314 FEL 316 (318)
T ss_dssp SCC
T ss_pred CCC
Confidence 653
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.6e-39 Score=313.99 Aligned_cols=281 Identities=12% Similarity=0.034 Sum_probs=230.1
Q ss_pred eecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcc-cceeeeccccCceEEEEeCCCCe-EE
Q 011452 131 LNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAG-FALFESESLKWPGFVEFDDVNGK-VL 208 (485)
Q Consensus 131 l~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~-~~lf~~~~~~~~~~V~Fs~pnG~-~L 208 (485)
+...|.+.|.+++|+|+|+.|++++. | ++++||++..++.... ..++ .+...+..++|+ |+|+ +|
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~----d------~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~-~~~~~~l 72 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSW----D------GSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFI-DNTDLQI 72 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEET----T------SEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEE-ESSSEEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcC----C------CeEEEEEeCCCCccccceeee--ecCCceEEEEEC-CCCCcEE
Confidence 33458899999999999999999774 3 5999999988772110 1122 345567789998 7999 99
Q ss_pred EEeeCCCcEEEeec-CCCeEEEEE----cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCC---------CeEEEEee
Q 011452 209 TYSAQDSIYKVFDL-KNYTMLYSI----SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIED---------GTVLKSFN 274 (485)
Q Consensus 209 as~s~D~tiKlWdl-~~g~~l~tl----~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~t---------G~~L~tl~ 274 (485)
++++.|++|++||+ .+++. ..+ +...|.+++|+|+..++++ + .|++|++||+.+ ++++.++.
T Consensus 73 ~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~-~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 73 YVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAA-S--WDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp EEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEE-E--TTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred EEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEE-c--CCCeEEEEcccccccccccccCCeeeEEe
Confidence 99999999999999 88775 344 4458999999995555544 3 458999999998 88888888
Q ss_pred cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCC-Ce--eEEecccCCCceEEEEEcC-CCcEEEEEe-CCcEEEEeCC
Q 011452 275 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-FE--LTEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFR 349 (485)
Q Consensus 275 ~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~t-g~--~~~~l~gh~~~v~avaFsp-dg~llaS~s-D~TIklWd~~ 349 (485)
|...+..++|+ + +.+++++.|++|++||+++ ++ .......|...|.+++|+| ++++|++++ |++|+||+++
T Consensus 149 -~~~~v~~~~~~-~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 149 -VKNKIFTMDTN-S--SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp -SCCCEEEEEEC-S--SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred -eCCceEEEEec-C--CcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 77889999996 3 3388899999999999998 54 3445567888999999999 999999999 9999999996
Q ss_pred -C------cEEEEeecCCCCC----CCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC-
Q 011452 350 -G------ELVTSFEDHLLWH----PDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS- 417 (485)
Q Consensus 350 -G------~ll~tl~gH~~~~----~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH- 417 (485)
+ +++.+|.+|.... ....|.+++|+|||++|++++. ||+|+|||+.+++++.++.+|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~~~h 293 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS-----------DGIISCWNLQTRKKIKNFAKFN 293 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET-----------TSCEEEEETTTTEEEEECCCCS
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC-----------CceEEEEcCccHhHhhhhhccc
Confidence 5 8899999996500 0012999999999999999987 799999999999999999998
Q ss_pred CCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCc-EEEc
Q 011452 418 NGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGL-VHVW 483 (485)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~Dgt-VklW 483 (485)
.. .|++++ |||+.|+||+.||+ .+.|
T Consensus 294 ~~--------------------------------------~v~~~~--~~~~~l~s~s~Dg~~~~~~ 320 (342)
T 1yfq_A 294 ED--------------------------------------SVVKIA--CSDNILCLATSDDTFKTNA 320 (342)
T ss_dssp SS--------------------------------------EEEEEE--ECSSEEEEEEECTHHHHCS
T ss_pred CC--------------------------------------CceEec--CCCCeEEEEecCCcccccc
Confidence 62 899999 99999999999999 4433
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=325.32 Aligned_cols=316 Identities=11% Similarity=0.151 Sum_probs=229.1
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCc-----c---cceeeeccc------------cC
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDA-----G---FALFESESL------------KW 194 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~-----~---~~lf~~~~~------------~~ 194 (485)
+.+.|.+|+|+|+|+.||+++. | ++++||++..++... . ...+. .|. ..
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~----d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDK----G------GRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEK 95 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEET----T------SEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCC
T ss_pred ccCcEEEEEECCCCCEEEEEcC----C------CeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCc
Confidence 5678999999999999999774 3 599999998776200 0 11222 233 45
Q ss_pred ceEEEEeCCCC--eEEEEeeCCCcEEEeecCCCeEE---------------------------------------EEE--
Q 011452 195 PGFVEFDDVNG--KVLTYSAQDSIYKVFDLKNYTML---------------------------------------YSI-- 231 (485)
Q Consensus 195 ~~~V~Fs~pnG--~~Las~s~D~tiKlWdl~~g~~l---------------------------------------~tl-- 231 (485)
+..|+|+ |++ ..|++++.|++|+|||+.+++.. ..+
T Consensus 96 V~~l~~~-~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 96 INKIRWL-PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCEEEEC-CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred eEEEEEc-CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 7789998 687 78999999999999999875542 122
Q ss_pred -cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecC-CCeEEEE-------eecCCcceeEEEEEecCC-CEEEEEeCCCc
Q 011452 232 -SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIE-DGTVLKS-------FNHLLHRNKKVDFIEQFN-EKLLVKQENEN 301 (485)
Q Consensus 232 -~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~-tG~~L~t-------l~~~~~~~~~V~f~~~~~-~~lls~s~D~t 301 (485)
|...|.+++|+|++.+++++ .|++|+|||++ .++++.. +.+|...+..++|+ |++ ..|++++.|++
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSA---DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH-PNSCNTFVYSSSKGT 250 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEE---CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC-SSCTTEEEEEETTSC
T ss_pred CCCcceEEEEEcCCCCEEEEe---CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEEC-CCCCcEEEEEeCCCe
Confidence 34689999999977777765 36899999998 5566663 56888899999997 566 78888999999
Q ss_pred EEEEECCCCee----EEecccCCC------------ceEEEEEcCCCcEEEEEeCCcEEEEeCC--CcEEEEeecCCCCC
Q 011452 302 LQILDVRNFEL----TEVSRTEFM------------TPSAFIFLYENQLFLTFRNRTVAVWNFR--GELVTSFEDHLLWH 363 (485)
Q Consensus 302 IkIWDv~tg~~----~~~l~gh~~------------~v~avaFspdg~llaS~sD~TIklWd~~--G~ll~tl~gH~~~~ 363 (485)
|+|||++++++ +..+.+|.. .|.+++|+|+|++|+++++++|+|||++ ++++.++.+|....
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccc
Confidence 99999999997 788888886 8999999999999999989999999994 88999999997431
Q ss_pred C--------CC--CeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCC
Q 011452 364 P--------DC--NTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYS 433 (485)
Q Consensus 364 ~--------~~--~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~ 433 (485)
. ++ .+..++|+|||++|++++. ||+|+|||+.+++++ ++.+|.+.... .++.+..+
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~-----------dg~v~iwd~~~~~~~-~~~~~~~~~~~-~~~~~~~~- 396 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSY-----------NNFFRMFDRNTKRDI-TLEASRENNKP-RTVLKPRK- 396 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECS-----------TTEEEEEETTTCCEE-EEECCSTTCCT-TCBCCCCC-
T ss_pred ccccccccccccccceEEEECCCCCEEEEecc-----------CCEEEEEEcCCCcce-eeeeccccccc-ccccCCcc-
Confidence 1 00 0224999999999999987 799999999999987 67777641110 00000000
Q ss_pred CCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 434 SGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
.... .+.. ........-.+...|..++|+|+|+.||+|+.|+ +.+|+
T Consensus 397 ~~~~--~~~~-~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 397 VCAS--GKRK-KDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp EECS--SCCC-TTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred cccc--CCcc-cccccccccccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 0000 0000 0000000111224789999999999999999988 56664
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.2e-40 Score=338.58 Aligned_cols=282 Identities=14% Similarity=0.150 Sum_probs=217.4
Q ss_pred cccceEEEEEe---cCEEEEEeCCCeEEeeecccCcEEEEee-cCCcccEEEEEEee-CCCEEEEEEeecCCCCccccee
Q 011452 94 KRSKIIEIVAA---RDIVFALAQSGVCAAFCRETNQRICFLN-VTADEVIRSLFYNK-NNDSLITVSVYASDNFSSLRCR 168 (485)
Q Consensus 94 ~~s~V~~i~~s---~~~ias~s~dgtiklW~~~tG~~l~tl~-g~~~~~i~sv~~sp-dg~~Las~S~d~~~d~stL~~~ 168 (485)
+...|.+|+|+ +.+||+|+.||+|+|||..+++..+.+. .+|...|.+|+|+| |++.|+|+|. | +
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~----D------~ 187 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM----E------G 187 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS----S------S
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC----C------C
Confidence 46679999997 5699999999999999998887655443 23888999999998 6899999774 4 5
Q ss_pred EEEEeEeccCCcCcccceeee--ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCC
Q 011452 169 STRIEYIRRGKPDAGFALFES--ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPG 244 (485)
Q Consensus 169 t~~lw~i~~G~~~~~~~lf~~--~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg 244 (485)
+++|||++.+.+ ..+.. ....++.+++|+ |+|++|++|+.|++|+|||+. ++++.++. ...|.+|+|+|+
T Consensus 188 ~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 188 TTRLQDFKGNIL----RVFASSDTINIWFCSLDVS-ASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp CEEEEETTSCEE----EEEECCSSCSCCCCCEEEE-TTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTT
T ss_pred EEEEeeccCCce----eEEeccCCCCccEEEEEEC-CCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCC
Confidence 999999865543 12222 223345689998 799999999999999999986 45566664 468999999984
Q ss_pred -ceEEEEEcCCCCeeEEEEecCCCeEEEEe---ecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCC
Q 011452 245 -IMLLIFTKASGHVPLKILSIEDGTVLKSF---NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEF 320 (485)
Q Consensus 245 -~~ll~sss~~~D~tIklWdi~tG~~L~tl---~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~ 320 (485)
..++++++ .|++|+|||+.+++....+ .+|...|.+|+|+ |++.+|++++.|++|+|||+.++++...+.+|.
T Consensus 262 ~~~~~~s~s--~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 262 CDWFLATAS--VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS-PDGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp CSSEEEEEE--TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBC-TTSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred CceEEEEec--CcceeeEEecccccccceEEEeeeccccccceeEC-CCCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 44555544 4589999999988765544 5788889999997 788999999999999999999999888876664
Q ss_pred C------ceEEEEEcCCCcEEEEEe-------------CCcEEEEeCC-CcEEEEee-cCCCCCCCCCeeEE-EECCCCC
Q 011452 321 M------TPSAFIFLYENQLFLTFR-------------NRTVAVWNFR-GELVTSFE-DHLLWHPDCNTNNI-YITSDQD 378 (485)
Q Consensus 321 ~------~v~avaFspdg~llaS~s-------------D~TIklWd~~-G~ll~tl~-gH~~~~~~~~v~sv-afSpDG~ 378 (485)
. .+....|+|++.++++++ +++|++||.+ |+++.++. +|... |.++ +|+|||+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~-----v~s~~~fspdg~ 413 (435)
T 4e54_B 339 HRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG-----ISSLNEFNPMGD 413 (435)
T ss_dssp CCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC-----CCCEEEECTTSS
T ss_pred ccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc-----EEEEEEECCCCC
Confidence 3 233445666666655543 3689999996 99998875 56555 7776 7999999
Q ss_pred EEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEE
Q 011452 379 LIISYCKADSDDPLAEGNAGSINISNILTGKCL 411 (485)
Q Consensus 379 ~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l 411 (485)
+||||+ |++|+|||+++|+..
T Consensus 414 ~lasg~------------d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 414 TLASAM------------GYHILIWSQQEARTR 434 (435)
T ss_dssp CEEEEC------------SSEEEECCCC-----
T ss_pred EEEEEc------------CCcEEEEECCcCeee
Confidence 999986 589999999999864
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-39 Score=327.14 Aligned_cols=282 Identities=13% Similarity=0.125 Sum_probs=221.2
Q ss_pred cccceEEEEEe---cCEEEEEeCCCeEEeeeccc---CcEEE-EeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccc
Q 011452 94 KRSKIIEIVAA---RDIVFALAQSGVCAAFCRET---NQRIC-FLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLR 166 (485)
Q Consensus 94 ~~s~V~~i~~s---~~~ias~s~dgtiklW~~~t---G~~l~-tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~ 166 (485)
|..+|.+|+|+ +++||+++.||+|++||+.+ ++... .+...|...|.+|+|+|+++.|++++. |
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~----d----- 132 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSK----D----- 132 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEET----T-----
T ss_pred CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeC----C-----
Confidence 44556666665 68999999999999999987 65332 333348889999999999999999774 4
Q ss_pred eeEEEEeEec---cCCcCcccceeeec-----------cccCceEEE--EeCCCCeEEEEeeCCCcEEEeecCCCeEEEE
Q 011452 167 CRSTRIEYIR---RGKPDAGFALFESE-----------SLKWPGFVE--FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS 230 (485)
Q Consensus 167 ~~t~~lw~i~---~G~~~~~~~lf~~~-----------~~~~~~~V~--Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~t 230 (485)
++++||++. .|+... .+... +...+..++ ++ ++|.+|++++.|++|++||+.+++++.+
T Consensus 133 -g~i~vwd~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 133 -GQIIVLKVNHYQQESEVK---FLNCECIRKINLKNFGKNEYAVRMRAFVN-EEKSLLVALTNLSRVIIFDIRTLERLQI 207 (437)
T ss_dssp -SEEEEEEEEEEEETTEEE---EEEEEEEEEEEGGGGSSCCCEEEEEEEEC-SSCEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -CEEEEEEeccccCCceee---ccccceeEEEEccCcccccCceEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCeeeEE
Confidence 599999994 666521 11110 111222333 43 6899999999999999999999999988
Q ss_pred EcC----CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEee-cCCcceeEEEEEe---cCCCEEEEEeCCCcE
Q 011452 231 ISD----KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFN-HLLHRNKKVDFIE---QFNEKLLVKQENENL 302 (485)
Q Consensus 231 l~~----~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~-~~~~~~~~V~f~~---~~~~~lls~s~D~tI 302 (485)
+.. ..|.+++|+|++.++++++. |++|+|||++++++++++. .|...+..++|.+ +++..|++++.|++|
T Consensus 208 ~~~~~h~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 208 IENSPRHGAVSSICIDEECCVLILGTT--RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EECCGGGCCEEEEEECTTSCEEEEEET--TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EccCCCCCceEEEEECCCCCEEEEEcC--CCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 854 68999999997777666554 4899999999999999997 6667888997764 345577778899999
Q ss_pred EEEECCCCeeEEecccC--------------------------CCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEE
Q 011452 303 QILDVRNFELTEVSRTE--------------------------FMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 354 (485)
Q Consensus 303 kIWDv~tg~~~~~l~gh--------------------------~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~ 354 (485)
+|||+++++++.++.+| ...|++++|+ ++++|+|++ |++|++||++ ++++.
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 99999999998887654 4557788888 779999999 9999999996 99998
Q ss_pred EeecCCC---------------------------------CCCCCCeeEEEECCC--CCEEEEEecCCCCCCCCcCCCCe
Q 011452 355 SFEDHLL---------------------------------WHPDCNTNNIYITSD--QDLIISYCKADSDDPLAEGNAGS 399 (485)
Q Consensus 355 tl~gH~~---------------------------------~~~~~~v~svafSpD--G~~LaS~s~d~~~d~~~~~~Dgt 399 (485)
++.+|.. .|.+ .|++|+|+++ +.+|+||+. ||+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~I~~i~~~~~~~~~~l~s~~~-----------dG~ 432 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHD-IINSISTCEVDETPLLVACDN-----------SGL 432 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC-------------CC-CEEEEEEEESSSSEEEEEEET-----------TSC
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCccccccc-ceeeEeeeccCCceEEEEEcC-----------Cce
Confidence 8887421 0122 2999999998 889999987 799
Q ss_pred EEEEe
Q 011452 400 INISN 404 (485)
Q Consensus 400 IklWd 404 (485)
|+||+
T Consensus 433 I~iw~ 437 (437)
T 3gre_A 433 IGIFQ 437 (437)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99995
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.6e-39 Score=312.16 Aligned_cols=247 Identities=9% Similarity=0.060 Sum_probs=196.4
Q ss_pred EEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCC-CCeE
Q 011452 129 CFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDV-NGKV 207 (485)
Q Consensus 129 ~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~p-nG~~ 207 (485)
.++.+ |.+.|++++|+|+|+.||++|. | ++++||++..+.... ...+. +|...+..|+|++| +|++
T Consensus 3 ~~~~~-h~~~V~~~~~s~~g~~las~s~----D------~~v~iw~~~~~~~~~-~~~l~-gH~~~V~~v~~s~~~~g~~ 69 (297)
T 2pm7_B 3 VIANA-HNEMIHDAVMDYYGKRMATCSS----D------KTIKIFEVEGETHKL-IDTLT-GHEGPVWRVDWAHPKFGTI 69 (297)
T ss_dssp EECCS-CSSCEEEEEECTTSSEEEEEET----T------SCEEEEEBCSSCBCC-CEEEC-CCSSCEEEEEECCGGGCSE
T ss_pred eeccC-CcCceEEEEECCCCCEEEEEeC----C------CEEEEEecCCCCcEE-EEEEc-cccCCeEEEEecCCCcCCE
Confidence 34555 8889999999999999999874 4 599999986432211 11222 35566788999754 5999
Q ss_pred EEEeeCCCcEEEeecCCCe--EEEEE--cCCcEEEEEEcCC--ceEEEEEcCCCCeeEEEEecCCCeE--EEEeecCCcc
Q 011452 208 LTYSAQDSIYKVFDLKNYT--MLYSI--SDKNVQEIKISPG--IMLLIFTKASGHVPLKILSIEDGTV--LKSFNHLLHR 279 (485)
Q Consensus 208 Las~s~D~tiKlWdl~~g~--~l~tl--~~~~V~~VafSpg--~~ll~sss~~~D~tIklWdi~tG~~--L~tl~~~~~~ 279 (485)
||+||.|++|||||+.+++ .+.++ +...|.+|+|+|+ +.++++++ .|++|+|||+.++.. ...+.+|...
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~h~~~ 147 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIG 147 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEEBCSSSCBCCEEEECCSSC
T ss_pred EEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEE--CCCcEEEEEecCCCceeeeeeecccCc
Confidence 9999999999999999874 45555 4568999999984 44444444 458999999988742 4678899999
Q ss_pred eeEEEEEec------------CCCEEEEEeCCCcEEEEECCCCe----eEEecccCCCceEEEEEcCCC---cEEEEEe-
Q 011452 280 NKKVDFIEQ------------FNEKLLVKQENENLQILDVRNFE----LTEVSRTEFMTPSAFIFLYEN---QLFLTFR- 339 (485)
Q Consensus 280 ~~~V~f~~~------------~~~~lls~s~D~tIkIWDv~tg~----~~~~l~gh~~~v~avaFspdg---~llaS~s- 339 (485)
+.+++|++. ++..|++++.|++|+|||+++++ +..++.+|...|.+++|+|++ ++|||++
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 999999742 14578889999999999999876 677899999999999999995 8999999
Q ss_pred CCcEEEEeCC-Cc---EEEEe--ecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC
Q 011452 340 NRTVAVWNFR-GE---LVTSF--EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 340 D~TIklWd~~-G~---ll~tl--~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
|++|+|||++ ++ ....+ .+|..+ |++++|+|||++||+++. |++|+||+..
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~las~~~-----------D~~v~lw~~~ 284 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGG-----------DNKVTLWKEN 284 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSC-----EEEEEECSSSCCEEEEET-----------TSCEEEEEEC
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCCc-----EEEEEECCCCCEEEEEcC-----------CCcEEEEEEC
Confidence 9999999985 32 23344 466655 999999999999999997 7999999976
No 92
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-40 Score=356.38 Aligned_cols=309 Identities=10% Similarity=0.029 Sum_probs=229.0
Q ss_pred cceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEe
Q 011452 96 SKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (485)
Q Consensus 96 s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw 173 (485)
..|.+|+++ |++||+++.|+||+ +.++++ ++.+ |...|++|+|+|||. + +++++|
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~g-h~~~v~~V~FsPdg~----------~-------~~~~~~ 72 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINC-NSKNLFHVKEFPLEF----------E-------NKLDFE 72 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSS-BGGGTEEEEEECCCC----------C-------CTTTTS
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccc---eecC-CCccEEEEEECCCCC----------c-------ceEEEE
Confidence 457777777 99999999999999 755555 4455 888999999999991 2 244444
Q ss_pred EeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCC------cEEEEEEcCCceE
Q 011452 174 YIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK------NVQEIKISPGIML 247 (485)
Q Consensus 174 ~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~------~V~~VafSpg~~l 247 (485)
+ ++.. .+++..+..++..|+|| |||++||+++.|++|+|||.++ ++.++..+ .|.+|+|||++.+
T Consensus 73 ~---~~~~---~~~~~~~~~~V~~vawS-PdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~ 143 (588)
T 2j04_A 73 L---AQQN---GLLNSQPVCYPRVCKPS-PIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESS 143 (588)
T ss_dssp C---CCSS---CSSTTSCSCCEEEEEEC-SSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSC
T ss_pred e---CCCc---eEeecCCCCcEEEEEEC-CCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCE
Confidence 4 3321 13332234678899998 7999999999999999999655 66665522 3999999997777
Q ss_pred EEEEcCCCCeeEEEEecCCCe-------EEEEe----ecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE---
Q 011452 248 LIFTKASGHVPLKILSIEDGT-------VLKSF----NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELT--- 313 (485)
Q Consensus 248 l~sss~~~D~tIklWdi~tG~-------~L~tl----~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~--- 313 (485)
+++++. |++|+|||+++|+ .++++ .+|...|.+|+|+ |++ +++++.|++|||||+.++++.
T Consensus 144 LAsgs~--DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS-Pdg--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 144 IVVGNE--DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY-EDV--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp EEEEET--TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE-TTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred EEEEcC--CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc-CCc--EEEEeCCCeEEEEECCCCccccce
Confidence 766554 5899999999986 47888 6777899999998 555 888999999999999988843
Q ss_pred Eec-ccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCCCcEEEEee-cCCCCCCCCCeeEEEE--CCCCCEEEEEecCCCC
Q 011452 314 EVS-RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFE-DHLLWHPDCNTNNIYI--TSDQDLIISYCKADSD 389 (485)
Q Consensus 314 ~~l-~gh~~~v~avaFspdg~llaS~sD~TIklWd~~G~ll~tl~-gH~~~~~~~~v~svaf--SpDG~~LaS~s~d~~~ 389 (485)
+++ .+|...|.+++|+ |+.||+++|++|+|||+.+..+.++. ||... |++|+| +|||+.|++++.
T Consensus 219 ~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~-----V~~va~~~s~d~~~La~a~e---- 287 (588)
T 2j04_A 219 RMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLEN-----FHIIPLNHEKESTILLMSNK---- 287 (588)
T ss_dssp EEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSC-----CCEEEETTCSSCEEEEECSS----
T ss_pred eeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCce-----EEEEEeeeCCCCCEEEEEcC----
Confidence 566 4888999999999 68999999999999999855553444 89987 999999 999999999986
Q ss_pred CCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCC
Q 011452 390 DPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRN 469 (485)
Q Consensus 390 d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~ 469 (485)
||+ |||.... ++ +..... . .|.. ++....|+..... +. .. ++...|++|+|||||+
T Consensus 288 -------dG~-klw~~d~---~~-~spd~~--l--~a~~--d~~v~lW~~~g~~----l~-~~-~~~~~I~~va~SPdG~ 343 (588)
T 2j04_A 288 -------TSY-KVLLEDE---LH-VTADNI--I--APYL--EKKFKKWSTIWNE----FN-NY-ETTLVIHGISLSPDGY 343 (588)
T ss_dssp -------CEE-EEEESSS---EE-EECCCS--S--HHHH--HHHHHHTTTTTTS----SS-SS-CCEEEEEEEEECTTSS
T ss_pred -------CCC-EEEeecc---EE-ECCCce--E--EEEc--CCEEEEEECCCCc----ee-ee-ccceEEEEEEECCCCC
Confidence 799 9999762 33 333220 0 0110 2222223221100 00 00 1123699999999999
Q ss_pred EEEEecC
Q 011452 470 EIYTGNR 476 (485)
Q Consensus 470 ~LaSgs~ 476 (485)
+||+++.
T Consensus 344 ~lA~~~~ 350 (588)
T 2j04_A 344 SIAIVYD 350 (588)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999984
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-38 Score=318.38 Aligned_cols=284 Identities=8% Similarity=0.077 Sum_probs=229.5
Q ss_pred eEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEecc
Q 011452 98 IIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRR 177 (485)
Q Consensus 98 V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~ 177 (485)
+..+.++++.+++++.||++++|+..+|+.+..+...|...|.+|+|+|+|+.|++++. | ++++||++.+
T Consensus 96 ~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~----d------g~i~iwd~~~ 165 (401)
T 4aez_A 96 LNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG----N------GLVDIYDVES 165 (401)
T ss_dssp CBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET----T------SCEEEEETTT
T ss_pred EEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC----C------CeEEEEECcC
Confidence 44456667778999999999999999999999888878889999999999999999774 3 4899999988
Q ss_pred CCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecC-CCeEEEEEc--CCcEEEEEEcCCceEEEEEcCC
Q 011452 178 GKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSIS--DKNVQEIKISPGIMLLIFTKAS 254 (485)
Q Consensus 178 G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~-~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~ 254 (485)
++... .+. .+...+..++|+ +.+|++++.|++|++||+. .+..+.++. ...|.+++|+|++.++++++
T Consensus 166 ~~~~~---~~~-~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-- 236 (401)
T 4aez_A 166 QTKLR---TMA-GHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG-- 236 (401)
T ss_dssp CCEEE---EEC-CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE--
T ss_pred CeEEE---Eec-CCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe--
Confidence 87622 232 344556688885 5799999999999999998 455666664 46899999999776666654
Q ss_pred CCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEE-Ee--CCCcEEEEECCCCeeEEecccCCCceEEEEEcCC
Q 011452 255 GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLV-KQ--ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE 331 (485)
Q Consensus 255 ~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls-~s--~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspd 331 (485)
.|++|++||+.+++++.++.+|...+..++|+ |++..+++ ++ .|++|++||+++++++..+. |...|.+++|+|+
T Consensus 237 ~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~-p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~ 314 (401)
T 4aez_A 237 NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWC-PWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPH 314 (401)
T ss_dssp TTSCEEEEETTCSSEEEEECCCSSCCCEEEEC-TTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSS
T ss_pred CCCeEEEccCCCCCccEEecCCcceEEEEEEC-CCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCC
Confidence 34899999999999999999999999999997 55555555 44 79999999999999999885 5568999999999
Q ss_pred CcEEEE--Ee-CCcEEEEeCC-CcEEE--EeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeC
Q 011452 332 NQLFLT--FR-NRTVAVWNFR-GELVT--SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNI 405 (485)
Q Consensus 332 g~llaS--~s-D~TIklWd~~-G~ll~--tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl 405 (485)
+++|++ ++ |++|+|||+. +++.. .+.+|... |..++|+|||++|++++. ||+|+|||+
T Consensus 315 ~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~-----v~~~~~s~dg~~l~s~~~-----------dg~i~iw~~ 378 (401)
T 4aez_A 315 SKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR-----VLYSALSPDGRILSTAAS-----------DENLKFWRV 378 (401)
T ss_dssp SSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC-----CCEEEECTTSSEEEEECT-----------TSEEEEEEC
T ss_pred CCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC-----EEEEEECCCCCEEEEEeC-----------CCcEEEEEC
Confidence 999999 55 9999999995 66544 47799877 999999999999999987 799999999
Q ss_pred CCCeEEEEecCCC
Q 011452 406 LTGKCLAKIRASN 418 (485)
Q Consensus 406 ~TGk~l~tl~gH~ 418 (485)
.+|+++.++..+.
T Consensus 379 ~~~~~~~~~~~~~ 391 (401)
T 4aez_A 379 YDGDHVKRPIPIT 391 (401)
T ss_dssp CC-----------
T ss_pred CCCcccccccccc
Confidence 9999998776554
No 94
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.7e-38 Score=343.85 Aligned_cols=285 Identities=12% Similarity=0.092 Sum_probs=243.6
Q ss_pred EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCe
Q 011452 127 RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGK 206 (485)
Q Consensus 127 ~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~ 206 (485)
..+++.+ |.+.|.+++|||+|+.||+++. + ++++||++.+|+... .+. .+...+..++|+ |+|+
T Consensus 5 ~~~~~~~-h~~~v~~i~~sp~~~~la~~~~----~------g~v~iwd~~~~~~~~---~~~-~~~~~v~~~~~s-~~~~ 68 (814)
T 3mkq_A 5 IKKTFSN-RSDRVKGIDFHPTEPWVLTTLY----S------GRVEIWNYETQVEVR---SIQ-VTETPVRAGKFI-ARKN 68 (814)
T ss_dssp CEEEEEE-ECSCEEEEEECSSSSEEEEEET----T------SEEEEEETTTTEEEE---EEE-CCSSCEEEEEEE-GGGT
T ss_pred cceeeec-CCCceEEEEECCCCCEEEEEeC----C------CEEEEEECCCCceEE---EEe-cCCCcEEEEEEe-CCCC
Confidence 3456766 8889999999999999999773 3 599999998887622 233 244567789998 7999
Q ss_pred EEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCC-eEEEEeecCCcceeEE
Q 011452 207 VLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDG-TVLKSFNHLLHRNKKV 283 (485)
Q Consensus 207 ~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG-~~L~tl~~~~~~~~~V 283 (485)
+||+++.|++|+|||+.+++++.++. ...|.+++|||++.++++++ .|++|++||++++ .+...+.+|.+.+..+
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTSEEEEEEGGGTSEEEEEEECCSSCEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc--CCCEEEEEECCCCceEEEEEcCCCCcEEEE
Confidence 99999999999999999999988885 45899999999776555544 3589999999998 7888999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCC-CceEEEEEcC--CCcEEEEEe-CCcEEEEeCC-CcEEEEeec
Q 011452 284 DFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEF-MTPSAFIFLY--ENQLFLTFR-NRTVAVWNFR-GELVTSFED 358 (485)
Q Consensus 284 ~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~-~~v~avaFsp--dg~llaS~s-D~TIklWd~~-G~ll~tl~g 358 (485)
+|++.++..+++++.|++|++||+.+++....+..|. ..+..++|+| ++++|++++ |++|++||++ ++++.++.+
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 226 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 9984367788889999999999999988877776554 8999999999 999999999 9999999996 999999999
Q ss_pred CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCcc
Q 011452 359 HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCN 438 (485)
Q Consensus 359 H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~ 438 (485)
|... |..++|+|||++|++++. ||+|++||+.+++++.++..|..
T Consensus 227 ~~~~-----v~~~~~~~~~~~l~~~~~-----------dg~v~vwd~~~~~~~~~~~~~~~------------------- 271 (814)
T 3mkq_A 227 HMSN-----VSFAVFHPTLPIIISGSE-----------DGTLKIWNSSTYKVEKTLNVGLE------------------- 271 (814)
T ss_dssp CSSC-----EEEEEECSSSSEEEEEET-----------TSCEEEEETTTCSEEEEECCSSS-------------------
T ss_pred CCCC-----EEEEEEcCCCCEEEEEeC-----------CCeEEEEECCCCcEEEEeecCCC-------------------
Confidence 9877 999999999999999987 79999999999999999998862
Q ss_pred ccccccccccccchhcccCCeEEEEEcCCCC--EEEEecCCCcEEEcc
Q 011452 439 VKKHSHASRIRSTVAEALEDITALFYDEDRN--EIYTGNRHGLVHVWS 484 (485)
Q Consensus 439 ~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~--~LaSgs~DgtVklWd 484 (485)
.|++++|+|+|+ .+++|+ |+.+.+|+
T Consensus 272 -------------------~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 299 (814)
T 3mkq_A 272 -------------------RSWCIATHPTGRKNYIASGF-DNGFTVLS 299 (814)
T ss_dssp -------------------SEEEEEECTTCGGGEEEEEE-TTEEEEEE
T ss_pred -------------------cEEEEEEccCCCceEEEEEe-CCCEEEEE
Confidence 889999999987 456555 55566765
No 95
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.8e-39 Score=318.83 Aligned_cols=259 Identities=11% Similarity=0.081 Sum_probs=201.1
Q ss_pred EeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCC-CCeEE
Q 011452 130 FLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDV-NGKVL 208 (485)
Q Consensus 130 tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~p-nG~~L 208 (485)
++..+|...|++|+|+|+|++||++|. | ++++||++..|+... ...+. +|...+..|+|++| +|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~----D------~~v~lwd~~~~~~~~-~~~l~-gH~~~V~~v~~~~~~~~~~l 74 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSS----D------RSVKIFDVRNGGQIL-IADLR-GHEGPVWQVAWAHPMYGNIL 74 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEET----T------TEEEEEEEETTEEEE-EEEEE-CCSSCEEEEEECCGGGSSCE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeC----C------CeEEEEEecCCCcEE-EEEEc-CCCccEEEEEeCCCCCCCEE
Confidence 344458999999999999999999874 4 599999998775311 01122 35567789999754 59999
Q ss_pred EEeeCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcCC--ceEEEEEcCCCCeeEEEEecCCCeE---EEEeecCCcc
Q 011452 209 TYSAQDSIYKVFDLKNYT--MLYSIS--DKNVQEIKISPG--IMLLIFTKASGHVPLKILSIEDGTV---LKSFNHLLHR 279 (485)
Q Consensus 209 as~s~D~tiKlWdl~~g~--~l~tl~--~~~V~~VafSpg--~~ll~sss~~~D~tIklWdi~tG~~---L~tl~~~~~~ 279 (485)
+|++.|++|||||+.+++ ++.++. ...|.+|+|+|+ +.++++++ .|++|+|||+.++.. ++.+.+|...
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs--~D~~i~lwd~~~~~~~~~~~~~~~h~~~ 152 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGS--SDGAISLLTYTGEGQWEVKKINNAHTIG 152 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEEC--SSSCEEEEEECSSSCEEECCBTTSSSSC
T ss_pred EEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEc--CCCCEEEEecCCCCCcceeeeeccccCC
Confidence 999999999999999874 666764 458999999985 55555544 458999999988732 4566788888
Q ss_pred eeEEEEEecC----------------CCEEEEEeCCCcEEEEECCCC---eeEEecccCCCceEEEEEcCCC----cEEE
Q 011452 280 NKKVDFIEQF----------------NEKLLVKQENENLQILDVRNF---ELTEVSRTEFMTPSAFIFLYEN----QLFL 336 (485)
Q Consensus 280 ~~~V~f~~~~----------------~~~lls~s~D~tIkIWDv~tg---~~~~~l~gh~~~v~avaFspdg----~lla 336 (485)
+..++|++.. +..|++++.|++|||||++++ +++.++.+|...|++++|+|++ ++||
T Consensus 153 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 153 CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp BCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEE
T ss_pred cceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEE
Confidence 9999997421 357888899999999999865 5788899999999999999997 8999
Q ss_pred EEe-CCcEEEEeCCC----c-EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC-CC-
Q 011452 337 TFR-NRTVAVWNFRG----E-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL-TG- 408 (485)
Q Consensus 337 S~s-D~TIklWd~~G----~-ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~-TG- 408 (485)
|++ |++|+|||++. + ....+.+|..+ |++++|+|||++||+++. |++|+||+.. .|
T Consensus 233 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~-----v~~v~~sp~g~~las~~~-----------D~~v~lw~~~~~g~ 296 (316)
T 3bg1_A 233 SCSQDGRVFIWTCDDASSNTWSPKLLHKFNDV-----VWHVSWSITANILAVSGG-----------DNKVTLWKESVDGQ 296 (316)
T ss_dssp EEETTCEEEEEECSSTTCCCCBCCEEEECSSC-----EEEEEECTTTCCEEEEES-----------SSCEEEEEECTTSC
T ss_pred EEcCCCeEEEEEccCccccchhhhhhhcCCCc-----EEEEEEcCCCCEEEEEcC-----------CCeEEEEEECCCCc
Confidence 999 99999999852 1 23456778766 999999999999999997 7999999975 34
Q ss_pred -eEEEEecCCC
Q 011452 409 -KCLAKIRASN 418 (485)
Q Consensus 409 -k~l~tl~gH~ 418 (485)
+|+.++...+
T Consensus 297 ~~~~~~~~~~~ 307 (316)
T 3bg1_A 297 WVCISDVNKGQ 307 (316)
T ss_dssp EEEEEECC---
T ss_pred EEEeeeccCCC
Confidence 6788887654
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.3e-38 Score=315.53 Aligned_cols=273 Identities=13% Similarity=0.142 Sum_probs=228.6
Q ss_pred EEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEE
Q 011452 139 IRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYK 218 (485)
Q Consensus 139 i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiK 218 (485)
+.++.|++ +.|++++. | ++++||++.+|++. .++...+...+..|+|+ |+|++|++++.|++|+
T Consensus 96 ~~~~~~s~--~~l~~~~~----d------~~v~lw~~~~~~~~---~~~~~~~~~~v~~v~~s-~~~~~l~~~~~dg~i~ 159 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVAL----E------RNVYVWNADSGSVS---ALAETDESTYVASVKWS-HDGSFLSVGLGNGLVD 159 (401)
T ss_dssp CBCEEECT--TSEEEEEE----T------TEEEEEETTTCCEE---EEEECCTTCCEEEEEEC-TTSSEEEEEETTSCEE
T ss_pred EEEEeecC--CCEEEEEC----C------CeEEEeeCCCCcEe---EeeecCCCCCEEEEEEC-CCCCEEEEECCCCeEE
Confidence 44566665 45677663 3 49999999998873 34444345667799998 7999999999999999
Q ss_pred EeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecC-CCeEEEEeecCCcceeEEEEEecCCCEEEE
Q 011452 219 VFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIE-DGTVLKSFNHLLHRNKKVDFIEQFNEKLLV 295 (485)
Q Consensus 219 lWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~-tG~~L~tl~~~~~~~~~V~f~~~~~~~lls 295 (485)
|||+.+++++.++. ...|.+++|++. .++++ + .|++|++||+. .++.+.++.+|...+..++|+ |++..|++
T Consensus 160 iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~-~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~s 234 (401)
T 4aez_A 160 IYDVESQTKLRTMAGHQARVGCLSWNRH-VLSSG-S--RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR-SDGLQLAS 234 (401)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEETT-EEEEE-E--TTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEEEE
T ss_pred EEECcCCeEEEEecCCCCceEEEEECCC-EEEEE-c--CCCCEEEEecccCcceeeEEcCCCCCeeEEEEc-CCCCEEEE
Confidence 99999999998886 458999999653 44444 3 45899999999 677899999999999999997 57889999
Q ss_pred EeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCC-cEEEEEe---CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeE
Q 011452 296 KQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-QLFLTFR---NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 370 (485)
Q Consensus 296 ~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg-~llaS~s---D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~s 370 (485)
++.|++|+|||+++++++..+.+|...|.+++|+|++ .++++++ |++|++||++ ++++.++..+ .. |.+
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~-----v~~ 308 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-SQ-----VTS 308 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-SC-----EEE
T ss_pred EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-Cc-----EEE
Confidence 9999999999999999999999999999999999976 5677753 9999999996 9999999744 34 899
Q ss_pred EEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEE--ecCCCCCCCCcccccCCCCCCCCcccccccccccc
Q 011452 371 IYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAK--IRASNGLPAENECSCSGDYSSGSCNVKKHSHASRI 448 (485)
Q Consensus 371 vafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~t--l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (485)
++|+|+|++|++++. +.||+|+|||+.++++... +.+|..
T Consensus 309 ~~~s~~~~~l~~~~g---------~~dg~i~v~~~~~~~~~~~~~~~~h~~----------------------------- 350 (401)
T 4aez_A 309 LIWSPHSKEIMSTHG---------FPDNNLSIWSYSSSGLTKQVDIPAHDT----------------------------- 350 (401)
T ss_dssp EEECSSSSEEEEEEC---------TTTCEEEEEEEETTEEEEEEEEECCSS-----------------------------
T ss_pred EEECCCCCeEEEEee---------cCCCcEEEEecCCccceeEEEecCCCC-----------------------------
Confidence 999999999999652 2379999999999876655 668862
Q ss_pred ccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 449 RSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 449 ~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.|++++|+|||+.|+||+.||+|++|+.
T Consensus 351 ---------~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 351 ---------RVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp ---------CCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred ---------CEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 8999999999999999999999999984
No 97
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.6e-38 Score=322.07 Aligned_cols=265 Identities=14% Similarity=0.280 Sum_probs=228.8
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD 214 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D 214 (485)
|...|.++.| +|+.||+++. | +++++|++.+|++.. .+. .+...+.+++| +|++|++|+.|
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~----d------g~i~iwd~~~~~~~~---~~~-~h~~~v~~l~~---~~~~l~sg~~d 192 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLR----D------NTIKIWDKNTLECKR---ILT-GHTGSVLCLQY---DERVIITGSSD 192 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEES----S------SCEEEEESSSCCEEE---EEC-CCSSCEEEEEC---CSSEEEEEETT
T ss_pred CCCcEEEEEE--CCCEEEEEeC----C------CeEEEEeCCCCeEEE---EEc-CCCCcEEEEEE---CCCEEEEEcCC
Confidence 5567888876 8999999774 3 599999998888632 232 24455667777 57899999999
Q ss_pred CcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEE---EEeecCCcceeEEEEEecC
Q 011452 215 SIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVL---KSFNHLLHRNKKVDFIEQF 289 (485)
Q Consensus 215 ~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L---~tl~~~~~~~~~V~f~~~~ 289 (485)
++|+|||+.+++++.++.+ ..|.+++|+++ .++++ + .|++|++||+++++.+ ..+.+|...+..++| +
T Consensus 193 g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~-~l~s~-s--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~ 265 (435)
T 1p22_A 193 STVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTC-S--KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---D 265 (435)
T ss_dssp SCEEEEESSSCCEEEEECCCCSCEEEEECCTT-EEEEE-E--TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---E
T ss_pred CeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC-EEEEe-e--CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---C
Confidence 9999999999999999864 58999999865 55544 3 4589999999998876 778899899999998 4
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCC
Q 011452 290 NEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCN 367 (485)
Q Consensus 290 ~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~ 367 (485)
+..+++++.|++|+|||+++++++..+.+|...|.+++| ++++|++++ |++|++||++ |+++.++.+|...
T Consensus 266 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~----- 338 (435)
T 1p22_A 266 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL----- 338 (435)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSC-----
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCc-----
Confidence 789999999999999999999999999999999999988 578999999 9999999996 9999999999987
Q ss_pred eeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe---------EEEEecCCCCCCCCcccccCCCCCCCCcc
Q 011452 368 TNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK---------CLAKIRASNGLPAENECSCSGDYSSGSCN 438 (485)
Q Consensus 368 v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk---------~l~tl~gH~~~~~~~~~~~~~~~~~~~~~ 438 (485)
|.+++| ||++|++|+. ||+|+|||+.+++ ++.++.+|.+
T Consensus 339 v~~~~~--~~~~l~sg~~-----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~------------------- 386 (435)
T 1p22_A 339 VRCIRF--DNKRIVSGAY-----------DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG------------------- 386 (435)
T ss_dssp EEEEEC--CSSEEEEEET-----------TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS-------------------
T ss_pred EEEEEe--cCCEEEEEeC-----------CCcEEEEECCCCCCccccccchheeeccCCCC-------------------
Confidence 999998 8999999997 7999999998887 9999999973
Q ss_pred ccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 439 VKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 439 ~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.|++++| |++.|+||+.||+|+|||.
T Consensus 387 -------------------~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 387 -------------------RVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp -------------------CCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred -------------------CeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 8899999 7899999999999999984
No 98
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.9e-38 Score=298.35 Aligned_cols=238 Identities=16% Similarity=0.161 Sum_probs=204.2
Q ss_pred ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCC----eEEEEEc--CCcEEEEEEcC--CceEEEEEcCCCCeeEEE
Q 011452 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKNVQEIKISP--GIMLLIFTKASGHVPLKI 261 (485)
Q Consensus 190 ~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g----~~l~tl~--~~~V~~VafSp--g~~ll~sss~~~D~tIkl 261 (485)
+|...+..++|+ |+|++||+++.|++|+|||+.++ +++.++. ...|.+|+|+| ++.++++++ .|++|+|
T Consensus 9 gH~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~--~dg~v~v 85 (351)
T 3f3f_A 9 GHDDLVHDVVYD-FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS--YDKTVKL 85 (351)
T ss_dssp CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE--TTSCEEE
T ss_pred ccccceeEEEEc-CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc--CCCeEEE
Confidence 456678899998 79999999999999999999976 4566664 46899999998 354444544 3589999
Q ss_pred EecCCC---------eEEEEeecCCcceeEEEEEecC--CCEEEEEeCCCcEEEEECCCCeeEEecc-------------
Q 011452 262 LSIEDG---------TVLKSFNHLLHRNKKVDFIEQF--NEKLLVKQENENLQILDVRNFELTEVSR------------- 317 (485)
Q Consensus 262 Wdi~tG---------~~L~tl~~~~~~~~~V~f~~~~--~~~lls~s~D~tIkIWDv~tg~~~~~l~------------- 317 (485)
||++++ +++.++.+|...+..++|+ |+ +..+++++.|++|+|||+++++++..+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFA-PAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEEC-CGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEc-CCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 999998 7799999999999999997 55 7788899999999999999988655443
Q ss_pred cCCCceEEEEEcCC---CcEEEEEe-CCcEEEEeCC-CcE--EEEeecCCCCCCCCCeeEEEECCCC----CEEEEEecC
Q 011452 318 TEFMTPSAFIFLYE---NQLFLTFR-NRTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQ----DLIISYCKA 386 (485)
Q Consensus 318 gh~~~v~avaFspd---g~llaS~s-D~TIklWd~~-G~l--l~tl~gH~~~~~~~~v~svafSpDG----~~LaS~s~d 386 (485)
+|...+.+++|+|+ +++|++++ |+.+.+|+.. ++. +.++.+|... |.+++|+|+| ++|++++.
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----i~~~~~~p~~~~~~~~l~s~~~- 238 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL-----IRSISWAPSIGRWYQLIATGCK- 238 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC-----EEEEEECCCSSCSSEEEEEEET-
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc-----eeEEEECCCCCCcceEEEEEcC-
Confidence 78899999999998 99999999 9999888875 664 8889999887 9999999999 89999987
Q ss_pred CCCCCCCcCCCCeEEEEeCCCC----------------------------------------------eEEEEecCCCCC
Q 011452 387 DSDDPLAEGNAGSINISNILTG----------------------------------------------KCLAKIRASNGL 420 (485)
Q Consensus 387 ~~~d~~~~~~DgtIklWdl~TG----------------------------------------------k~l~tl~gH~~~ 420 (485)
||+|+|||+.++ +++.++.+|.
T Consensus 239 ----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-- 306 (351)
T 3f3f_A 239 ----------DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN-- 306 (351)
T ss_dssp ----------TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTS--
T ss_pred ----------CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc--
Confidence 799999999876 5666666665
Q ss_pred CCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 421 PAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
..|++|+|+|||+.||||+.||+|+||+.
T Consensus 307 ------------------------------------~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 307 ------------------------------------GEVWSVSWNLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp ------------------------------------SCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred ------------------------------------ccEEEEEEcCCCCEEEEecCCCcEEEEec
Confidence 38999999999999999999999999983
No 99
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-39 Score=321.29 Aligned_cols=244 Identities=11% Similarity=0.070 Sum_probs=191.8
Q ss_pred cccccCCCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeecccC--cEEEEeecCCcccEEEEEEeeCCCEEE
Q 011452 75 EYDTHDPKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRETN--QRICFLNVTADEVIRSLFYNKNNDSLI 152 (485)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG--~~l~tl~g~~~~~i~sv~~spdg~~La 152 (485)
.+..|+.++.++.|+|. +++||+++.||++++|++.++ +++.++.+ |...|.+++|+|+|+.||
T Consensus 6 ~~~~~~~~v~~~~~s~~-------------g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~ 71 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQ-------------RTEFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRIV 71 (377)
T ss_dssp EEEECSSCCSCCEECSS-------------SSEEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCEE
T ss_pred eEecCCCcEEEEEECCC-------------CCEEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEEE
Confidence 44445556666666666 999999999999999999988 78888887 888999999999999999
Q ss_pred EEEeecCCCCcccceeEEEEeEeccCC-cCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe---EE
Q 011452 153 TVSVYASDNFSSLRCRSTRIEYIRRGK-PDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---ML 228 (485)
Q Consensus 153 s~S~d~~~d~stL~~~t~~lw~i~~G~-~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~---~l 228 (485)
+++. | ++++||++..++ +.....+. .+...+..++|+ |+|++|++++.|++|+|||+.+++ ++
T Consensus 72 s~s~----d------~~v~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 138 (377)
T 3dwl_C 72 TCSQ----D------RNAYVYEKRPDGTWKQTLVLL--RLNRAATFVRWS-PNEDKFAVGSGARVISVCYFEQENDWWVS 138 (377)
T ss_dssp EEET----T------SSEEEC------CCCCEEECC--CCSSCEEEEECC-TTSSCCEEEESSSCEEECCC-----CCCC
T ss_pred EEeC----C------CeEEEEEcCCCCceeeeeEec--ccCCceEEEEEC-CCCCEEEEEecCCeEEEEEECCcccceee
Confidence 9874 4 589999998887 21111111 244567789998 799999999999999999999887 36
Q ss_pred EEEc---CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecC------------------CCeEEEEeecCCcceeEEEEEe
Q 011452 229 YSIS---DKNVQEIKISPGIMLLIFTKASGHVPLKILSIE------------------DGTVLKSFNHLLHRNKKVDFIE 287 (485)
Q Consensus 229 ~tl~---~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~------------------tG~~L~tl~~~~~~~~~V~f~~ 287 (485)
..+. ...|.+++|+|++.++++++. |++|+|||++ +|+++.++ +|...+..++|+
T Consensus 139 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s- 214 (377)
T 3dwl_C 139 KHLKRPLRSTILSLDWHPNNVLLAAGCA--DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS- 214 (377)
T ss_dssp EEECSSCCSCEEEEEECTTSSEEEEEES--SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC-
T ss_pred eEeecccCCCeEEEEEcCCCCEEEEEeC--CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC-
Confidence 6664 458999999997766666544 4899999995 57888889 899999999997
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCee----EEecccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC
Q 011452 288 QFNEKLLVKQENENLQILDVRNFEL----TEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR 349 (485)
Q Consensus 288 ~~~~~lls~s~D~tIkIWDv~tg~~----~~~l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~ 349 (485)
|++..|++++.|++|+|||++++++ +..+.+|...|.+++|+|||++|++++|+.+.+|+..
T Consensus 215 p~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 215 PSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp TTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 7788999999999999999999988 8889999999999999999999999994444477763
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.4e-38 Score=320.46 Aligned_cols=276 Identities=11% Similarity=0.136 Sum_probs=227.6
Q ss_pred cccceEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEe
Q 011452 94 KRSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (485)
Q Consensus 94 ~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw 173 (485)
+...|..+.+.+++||+++.||+|++||..+++++.++.+ |...|.++.| +++.||+++. | +++++|
T Consensus 132 ~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~sg~~----d------g~i~vw 198 (435)
T 1p22_A 132 TSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY--DERVIITGSS----D------STVRVW 198 (435)
T ss_dssp SCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC--CSSEEEEEET----T------SCEEEE
T ss_pred CCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE--CCCEEEEEcC----C------CeEEEE
Confidence 4567999999999999999999999999999999999987 8889999999 8899999774 4 599999
Q ss_pred EeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEE---EEEc--CCcEEEEEEcCCceEE
Q 011452 174 YIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML---YSIS--DKNVQEIKISPGIMLL 248 (485)
Q Consensus 174 ~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l---~tl~--~~~V~~VafSpg~~ll 248 (485)
++.+|++.. .+. .+...+..++|+ +..|++++.|++|++||+.+++.+ ..+. ...|.+++| .+..++
T Consensus 199 d~~~~~~~~---~~~-~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~ 270 (435)
T 1p22_A 199 DVNTGEMLN---TLI-HHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIV 270 (435)
T ss_dssp ESSSCCEEE---EEC-CCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEE
T ss_pred ECCCCcEEE---EEc-CCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEE
Confidence 999998732 222 244556678885 358999999999999999987744 4443 458999999 445555
Q ss_pred EEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEE
Q 011452 249 IFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIF 328 (485)
Q Consensus 249 ~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaF 328 (485)
++ + .|++|++||+++++++.++.+|...+..++|. +..+++++.|++|+|||+++++++.++.+|...|.+++|
T Consensus 271 s~-~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 344 (435)
T 1p22_A 271 SA-S--GDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 344 (435)
T ss_dssp EE-E--TTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC
T ss_pred EE-e--CCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe
Confidence 44 3 35899999999999999999999999999884 678999999999999999999999999999999999988
Q ss_pred cCCCcEEEEEe-CCcEEEEeCC-Cc---------EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCC
Q 011452 329 LYENQLFLTFR-NRTVAVWNFR-GE---------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNA 397 (485)
Q Consensus 329 spdg~llaS~s-D~TIklWd~~-G~---------ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~D 397 (485)
++++|++++ |++|++||++ ++ ++.++.+|... |.+++| ||++|+|++. |
T Consensus 345 --~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~--~~~~l~s~s~-----------D 404 (435)
T 1p22_A 345 --DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR-----VFRLQF--DEFQIVSSSH-----------D 404 (435)
T ss_dssp --CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSC-----CCCEEE--CSSCEEECCS-----------S
T ss_pred --cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCC-----eEEEEe--CCCEEEEEeC-----------C
Confidence 899999999 9999999995 66 89999999987 899999 8899999986 7
Q ss_pred CeEEEEeCCCCeEEEEecC
Q 011452 398 GSINISNILTGKCLAKIRA 416 (485)
Q Consensus 398 gtIklWdl~TGk~l~tl~g 416 (485)
|+|+|||+.++........
T Consensus 405 g~i~iwd~~~~~~~~~~~~ 423 (435)
T 1p22_A 405 DTILIWDFLNDPAAQAEPP 423 (435)
T ss_dssp SEEEEEC------------
T ss_pred CEEEEEECCCCCCcccCCC
Confidence 9999999998776655443
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.9e-37 Score=312.39 Aligned_cols=282 Identities=15% Similarity=0.235 Sum_probs=235.3
Q ss_pred eecccCcEEEEeecCCcc-cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEE
Q 011452 120 FCRETNQRICFLNVTADE-VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFV 198 (485)
Q Consensus 120 W~~~tG~~l~tl~g~~~~-~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V 198 (485)
|....-+....+.+ |.+ .+.+ ++++|+.|++++. | +++++|++.+|++.. .+. .+...+..+
T Consensus 103 w~~~~~~~~~~l~~-h~~~v~~~--~~~~g~~l~sg~~----d------g~i~vwd~~~~~~~~---~~~-~h~~~v~~~ 165 (445)
T 2ovr_B 103 WRRGELKSPKVLKG-HDDHVITC--LQFCGNRIVSGSD----D------NTLKVWSAVTGKCLR---TLV-GHTGGVWSS 165 (445)
T ss_dssp HHHSCCCCCEEEEC-STTSCEEE--EEEETTEEEEEET----T------SCEEEEETTTCCEEE---ECC-CCSSCEEEE
T ss_pred ccCCCcceeEEecc-cCCCcEEE--EEEcCCEEEEEEC----C------CcEEEEECCCCcEEE---EEc-CCCCCEEEE
Confidence 54443445667777 555 4554 5567999999774 4 599999999888632 222 345567788
Q ss_pred EEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecC
Q 011452 199 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHL 276 (485)
Q Consensus 199 ~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~ 276 (485)
+|+ +.+|++++.|++|++||+.+++++.++.+ ..|.+++|+++ .++++ + .|++|++||+++|+++.++.+|
T Consensus 166 ~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-~l~s~-s--~dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 166 QMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-RVVSG-S--RDATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT-EEEEE-E--TTSEEEEEESSSCCEEEEEECC
T ss_pred Eec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCC-EEEEE-e--CCCEEEEEECCCCcEEEEEcCC
Confidence 996 56999999999999999999999999864 57999999754 44444 3 4589999999999999999999
Q ss_pred CcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEE
Q 011452 277 LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 354 (485)
Q Consensus 277 ~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~ 354 (485)
...+..++| ++..+++++.|++|++||+++++++..+.+|...|.+++| ++++|++++ |++|++||++ ++++.
T Consensus 239 ~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 239 VAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIH 313 (445)
T ss_dssp SSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred cccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEE
Confidence 999999988 5788999999999999999999999999999999999999 899999999 9999999996 99999
Q ss_pred EeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCC
Q 011452 355 SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSS 434 (485)
Q Consensus 355 tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~ 434 (485)
++.+|... +..+.+ ++++|++++. ||+|++||+.+|+++.++.+|..
T Consensus 314 ~~~~~~~~-----v~~~~~--~~~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~~~~~--------------- 360 (445)
T 2ovr_B 314 TLTGHQSL-----TSGMEL--KDNILVSGNA-----------DSTVKIWDIKTGQCLQTLQGPNK--------------- 360 (445)
T ss_dssp EECCCCSC-----EEEEEE--ETTEEEEEET-----------TSCEEEEETTTCCEEEEECSTTS---------------
T ss_pred EEcCCccc-----EEEEEE--eCCEEEEEeC-----------CCeEEEEECCCCcEEEEEccCCC---------------
Confidence 99999876 776665 6789999987 79999999999999999998541
Q ss_pred CCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 435 GSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
| ...|++++|+ ++.|++|+.||+|+|||.
T Consensus 361 -------~-------------~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 361 -------H-------------QSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp -------C-------------SSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred -------C-------------CCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 0 0289999996 589999999999999984
No 102
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.4e-37 Score=291.75 Aligned_cols=256 Identities=13% Similarity=0.164 Sum_probs=209.9
Q ss_pred cCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcc-cceeeeccccCceEEEEeCC-CCeEEEE
Q 011452 133 VTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAG-FALFESESLKWPGFVEFDDV-NGKVLTY 210 (485)
Q Consensus 133 g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~-~~lf~~~~~~~~~~V~Fs~p-nG~~Las 210 (485)
.+|.+.|.+++|+|+|+.||+++. | ++++||++..+..... ...+. .+...+..++|++. ||++|++
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~----d------g~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSS----D------QHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEET----T------SEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeC----C------CeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEE
Confidence 348999999999999999999773 4 5999999976643110 11122 34556778999833 6999999
Q ss_pred eeCCCcEEEeecCCC---------eEEEEEc--CCcEEEEEEcCC--ceEEEEEcCCCCeeEEEEecCCCeEEEEee---
Q 011452 211 SAQDSIYKVFDLKNY---------TMLYSIS--DKNVQEIKISPG--IMLLIFTKASGHVPLKILSIEDGTVLKSFN--- 274 (485)
Q Consensus 211 ~s~D~tiKlWdl~~g---------~~l~tl~--~~~V~~VafSpg--~~ll~sss~~~D~tIklWdi~tG~~L~tl~--- 274 (485)
++.|++|+|||+.++ +++.++. ...|.+++|+|+ +.++++++ .|++|+|||+.+++++.++.
T Consensus 77 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~ 154 (351)
T 3f3f_A 77 ASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG--NDGILRLYDALEPSDLRSWTLTS 154 (351)
T ss_dssp EETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTCEEEEEECSSTTCTTCCEEEE
T ss_pred EcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec--CCCcEEEecCCChHHhccccccc
Confidence 999999999999987 5677775 468999999986 66555544 35899999999998776554
Q ss_pred ----------cCCcceeEEEEEec--CCCEEEEEeCCCcEEEEECCCCee--EEecccCCCceEEEEEcCCC----cEEE
Q 011452 275 ----------HLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNFEL--TEVSRTEFMTPSAFIFLYEN----QLFL 336 (485)
Q Consensus 275 ----------~~~~~~~~V~f~~~--~~~~lls~s~D~tIkIWDv~tg~~--~~~l~gh~~~v~avaFspdg----~lla 336 (485)
+|...+..++|++. .+..+++++.|+.+.+|+..+++. +..+.+|...|.+++|+|++ ++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~ 234 (351)
T 3f3f_A 155 EMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIA 234 (351)
T ss_dssp EEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEE
T ss_pred cccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEE
Confidence 57778889999742 378888899999999999988875 77888999999999999999 8999
Q ss_pred EEe-CCcEEEEeCC-C----------------------------------------------cEEEEeecCCCCCCCCCe
Q 011452 337 TFR-NRTVAVWNFR-G----------------------------------------------ELVTSFEDHLLWHPDCNT 368 (485)
Q Consensus 337 S~s-D~TIklWd~~-G----------------------------------------------~ll~tl~gH~~~~~~~~v 368 (485)
+++ |++|++||++ + +++.++.+|... |
T Consensus 235 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v 309 (351)
T 3f3f_A 235 TGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE-----V 309 (351)
T ss_dssp EEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC-----E
T ss_pred EEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc-----E
Confidence 999 9999999996 4 788899999877 9
Q ss_pred eEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCC---eEEEEecCC
Q 011452 369 NNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTG---KCLAKIRAS 417 (485)
Q Consensus 369 ~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TG---k~l~tl~gH 417 (485)
++++|+|||++|||++. ||+|+|||+.++ +|+.++..|
T Consensus 310 ~~~~~s~~~~~l~s~~~-----------dg~v~iw~~~~~~~~~~~~~~~~~ 350 (351)
T 3f3f_A 310 WSVSWNLTGTILSSAGD-----------DGKVRLWKATYSNEFKCMSVITAQ 350 (351)
T ss_dssp EEEEECSSSCCEEEEET-----------TSCEEEEEECTTSCEEEEEEEC--
T ss_pred EEEEEcCCCCEEEEecC-----------CCcEEEEecCcCcchhheeehccc
Confidence 99999999999999997 799999999988 466666665
No 103
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.5e-35 Score=293.36 Aligned_cols=275 Identities=12% Similarity=0.112 Sum_probs=226.0
Q ss_pred CEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccc
Q 011452 106 DIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFA 185 (485)
Q Consensus 106 ~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~ 185 (485)
.++++++.|+++++||.++|+++.++.+ |. .+.+++|+|+|+.|+.++ +.+ +++++|++.+|++. .
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~---~~d------~~i~v~d~~~~~~~---~ 68 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPV-GS-NPMGAVISPDGTKVYVAN---AHS------NDVSIIDTATNNVI---A 68 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEEC-SS-SEEEEEECTTSSEEEEEE---GGG------TEEEEEETTTTEEE---E
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeec-CC-CcceEEECCCCCEEEEEC---CCC------CeEEEEECCCCeEE---E
Confidence 4688999999999999999999998876 54 489999999999874433 123 59999999888862 2
Q ss_pred eeeeccccCceEEEEeCCCCeEE-EEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCce-EEEEEcCCCCeeEEEE
Q 011452 186 LFESESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIM-LLIFTKASGHVPLKIL 262 (485)
Q Consensus 186 lf~~~~~~~~~~V~Fs~pnG~~L-as~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~-ll~sss~~~D~tIklW 262 (485)
.+.. -..+..++|+ |+|+.| ++++.|++|++||+.+++++..+. ...+.+++|+|++. ++++++ .|++|++|
T Consensus 69 ~~~~--~~~v~~~~~s-pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~v~~~ 143 (391)
T 1l0q_A 69 TVPA--GSSPQGVAVS-PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN--GDKTVSVI 143 (391)
T ss_dssp EEEC--SSSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET--TTTEEEEE
T ss_pred EEEC--CCCccceEEC-CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeC--CCCEEEEE
Confidence 3332 2367789998 789876 556678999999999999988876 45899999998665 435543 45899999
Q ss_pred ecCCCeEEEEeecCCcceeEEEEEecCCCEEEE-EeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe--
Q 011452 263 SIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLV-KQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-- 339 (485)
Q Consensus 263 di~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls-~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-- 339 (485)
|+.+|+++..+..+ ..+..++|+ |++..|++ ++.|++|++||+++++++..+. |...+.+++|+|+|++|++++
T Consensus 144 d~~~~~~~~~~~~~-~~~~~~~~~-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~ 220 (391)
T 1l0q_A 144 NTVTKAVINTVSVG-RSPKGIAVT-PDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVD 220 (391)
T ss_dssp ETTTTEEEEEEECC-SSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEEC
T ss_pred ECCCCcEEEEEecC-CCcceEEEC-CCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecC
Confidence 99999999999865 456889986 67777754 5689999999999999988885 456899999999999888775
Q ss_pred --CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEE-EEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEec
Q 011452 340 --NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI-ISYCKADSDDPLAEGNAGSINISNILTGKCLAKIR 415 (485)
Q Consensus 340 --D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~L-aS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~ 415 (485)
|++|++||++ ++++.++..|.. +..++|+|||++| ++++. |++|++||+.+|++++++.
T Consensus 221 ~~~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~s~~~-----------d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 221 KYFNTVSMIDTGTNKITARIPVGPD------PAGIAVTPDGKKVYVALSF-----------XNTVSVIDTATNTITATMA 283 (391)
T ss_dssp SSCCEEEEEETTTTEEEEEEECCSS------EEEEEECTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEEE
T ss_pred cCCCcEEEEECCCCeEEEEEecCCC------ccEEEEccCCCEEEEEcCC-----------CCEEEEEECCCCcEEEEEE
Confidence 7899999996 999999988752 6899999999988 55554 7999999999999999999
Q ss_pred CCCC
Q 011452 416 ASNG 419 (485)
Q Consensus 416 gH~~ 419 (485)
.|..
T Consensus 284 ~~~~ 287 (391)
T 1l0q_A 284 VGKN 287 (391)
T ss_dssp CSSS
T ss_pred CCcC
Confidence 8864
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-37 Score=297.98 Aligned_cols=237 Identities=13% Similarity=0.172 Sum_probs=201.9
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecC--CCeEEEEEcC--CcEEEEEEcCC--ceEEEEEcCCCCeeEEEEec
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSISD--KNVQEIKISPG--IMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~--~g~~l~tl~~--~~V~~VafSpg--~~ll~sss~~~D~tIklWdi 264 (485)
|...+..++|+ |+|++||+++.|++|+|||+. +++++.++.+ ..|.+|+|+|+ +.++++++ .|++|+|||+
T Consensus 10 h~~~v~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iwd~ 86 (379)
T 3jrp_A 10 HNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDGKVLIWKE 86 (379)
T ss_dssp CCCCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSCEEEEEE
T ss_pred CcccEEEEEEc-CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec--cCCEEEEEEc
Confidence 56678899998 799999999999999999998 5567777754 58999999954 55555544 3589999999
Q ss_pred CCCe--EEEEeecCCcceeEEEEEecC--CCEEEEEeCCCcEEEEECCCCe--eEEecccCCCceEEEEEcC--------
Q 011452 265 EDGT--VLKSFNHLLHRNKKVDFIEQF--NEKLLVKQENENLQILDVRNFE--LTEVSRTEFMTPSAFIFLY-------- 330 (485)
Q Consensus 265 ~tG~--~L~tl~~~~~~~~~V~f~~~~--~~~lls~s~D~tIkIWDv~tg~--~~~~l~gh~~~v~avaFsp-------- 330 (485)
++|+ ++..+.+|...+..++|+ |+ +..+++++.|++|+|||+++++ ....+.+|...|.+++|+|
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWA-PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEEC-CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred CCCceeEeeeecCCCcceEEEEeC-CCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 9998 788899999999999997 55 7788999999999999999883 4556678999999999999
Q ss_pred -----CCcEEEEEe-CCcEEEEeCC-Cc----EEEEeecCCCCCCCCCeeEEEECCC---CCEEEEEecCCCCCCCCcCC
Q 011452 331 -----ENQLFLTFR-NRTVAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSD---QDLIISYCKADSDDPLAEGN 396 (485)
Q Consensus 331 -----dg~llaS~s-D~TIklWd~~-G~----ll~tl~gH~~~~~~~~v~svafSpD---G~~LaS~s~d~~~d~~~~~~ 396 (485)
++++|++++ |++|+|||++ ++ ++.++.+|... |.+++|+|| |++|++++.
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~-----v~~~~~sp~~~~~~~l~s~~~----------- 229 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYLASVSQ----------- 229 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEET-----------
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc-----EeEEEECCCCCCCCeEEEEeC-----------
Confidence 799999999 9999999985 43 67789999887 999999999 999999997
Q ss_pred CCeEEEEeCCCCe---EEEEecC--CCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEE
Q 011452 397 AGSINISNILTGK---CLAKIRA--SNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEI 471 (485)
Q Consensus 397 DgtIklWdl~TGk---~l~tl~g--H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~L 471 (485)
||+|+|||+.+++ ....+.. |. ..|++++|+|||+.|
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~--------------------------------------~~v~~~~~s~~g~~l 271 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFP--------------------------------------DVLWRASWSLSGNVL 271 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCS--------------------------------------SCEEEEEECSSSCCE
T ss_pred CCEEEEEeCCCCCccceeeeeccccCC--------------------------------------CcEEEEEEcCCCCEE
Confidence 7999999999874 2223322 32 289999999999999
Q ss_pred EEecCCCcEEEccC
Q 011452 472 YTGNRHGLVHVWSN 485 (485)
Q Consensus 472 aSgs~DgtVklWd~ 485 (485)
++|+.||+|+||+.
T Consensus 272 ~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 272 ALSGGDNKVTLWKE 285 (379)
T ss_dssp EEEESSSSEEEEEE
T ss_pred EEecCCCcEEEEeC
Confidence 99999999999983
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=306.89 Aligned_cols=284 Identities=8% Similarity=0.093 Sum_probs=222.5
Q ss_pred cccccceEEEEEe--cCEEEEEeCCCeEEeeecccCc-----------EEEEeecCCc------------ccEEEEEEee
Q 011452 92 LRKRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQ-----------RICFLNVTAD------------EVIRSLFYNK 146 (485)
Q Consensus 92 ~~~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~-----------~l~tl~g~~~------------~~i~sv~~sp 146 (485)
+-+..+|..|.|+ +++||+++.||+|++|++.+++ ++.++.+ |. ..|.+|.|+|
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcC
Confidence 4567788888888 9999999999999999999887 5788887 76 7899999999
Q ss_pred CC--CEEEEEEeecCCCCcccceeEEEEeEeccCCcCcc------------------------------------cceee
Q 011452 147 NN--DSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAG------------------------------------FALFE 188 (485)
Q Consensus 147 dg--~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~------------------------------------~~lf~ 188 (485)
++ ..|++++. | ++++||++..++.... ...+.
T Consensus 104 ~~~~~~l~s~s~----d------~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 104 QKNAAQFLLSTN----D------KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCSSSEEEEEEC----S------SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CCCcceEEEeCC----C------CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 98 78998774 3 5999999876443100 00122
Q ss_pred eccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC-CeEEEEE---------cCCcEEEEEEcCCc-eEEEEEcCCCCe
Q 011452 189 SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-YTMLYSI---------SDKNVQEIKISPGI-MLLIFTKASGHV 257 (485)
Q Consensus 189 ~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~-g~~l~tl---------~~~~V~~VafSpg~-~ll~sss~~~D~ 257 (485)
..+...+..++|+ |+|++|++| .|++|+|||+.+ ++++..+ +...|.+++|+|++ .++++++ .|+
T Consensus 174 ~~h~~~v~~~~~~-~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg 249 (447)
T 3dw8_B 174 NAHTYHINSISIN-SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS--SKG 249 (447)
T ss_dssp SCCSSCCCEEEEC-TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE--TTS
T ss_pred cCCCcceEEEEEc-CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe--CCC
Confidence 2355667789998 799999998 799999999984 4455533 24579999999965 5555544 358
Q ss_pred eEEEEecCCCeE----EEEeecCCc------------ceeEEEEEecCCCEEEEEeCCCcEEEEECCC-CeeEEecccCC
Q 011452 258 PLKILSIEDGTV----LKSFNHLLH------------RNKKVDFIEQFNEKLLVKQENENLQILDVRN-FELTEVSRTEF 320 (485)
Q Consensus 258 tIklWdi~tG~~----L~tl~~~~~------------~~~~V~f~~~~~~~lls~s~D~tIkIWDv~t-g~~~~~l~gh~ 320 (485)
+|+|||+.++++ ++++.+|.. .+..++|+ |++..|++++. ++|+|||+++ ++++.++.+|.
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFS-HSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEEC-TTSSEEEEEES-SEEEEEETTCCSSCSCCEESCG
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEEC-CCCCEEEEeeC-CeEEEEeCCCCccccceeeccc
Confidence 999999999998 899998876 89999997 67888888888 9999999998 99999998886
Q ss_pred Cc---------------eEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCC---------------------
Q 011452 321 MT---------------PSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLW--------------------- 362 (485)
Q Consensus 321 ~~---------------v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~--------------------- 362 (485)
.. +..++|+|+|++|++++ |++|+|||++ ++++ ++++|...
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKD 406 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTT
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccc
Confidence 42 23489999999999999 9999999997 6665 67766421
Q ss_pred -------CCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeC
Q 011452 363 -------HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNI 405 (485)
Q Consensus 363 -------~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl 405 (485)
.....|..++|+|+|.+||+++. +.+.||+-
T Consensus 407 ~~~~~~~~~~~~i~~~~~~p~~~~la~~~~------------~~~~~~~~ 444 (447)
T 3dw8_B 407 EISVDSLDFNKKILHTAWHPKENIIAVATT------------NNLYIFQD 444 (447)
T ss_dssp CEEGGGCCTTSCCCEEEECSSSSEEEEECS------------SCEEEEEC
T ss_pred cccccccccCCceeEEEECCCCCEEEEEec------------ceeeeecc
Confidence 11223788999999999999985 45888873
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=293.24 Aligned_cols=283 Identities=8% Similarity=0.039 Sum_probs=223.4
Q ss_pred cccceEEEEEe--c---CEEEEEeCCCeEEeeeccc-CcEE-EEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccc
Q 011452 94 KRSKIIEIVAA--R---DIVFALAQSGVCAAFCRET-NQRI-CFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLR 166 (485)
Q Consensus 94 ~~s~V~~i~~s--~---~~ias~s~dgtiklW~~~t-G~~l-~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~ 166 (485)
|..+|..|+|+ + ++||+++.||++++|++++ ++.+ ..+.+ |...|.+++|+|+|+.|++++. |
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~----d----- 107 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASC----D----- 107 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEET----T-----
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcC----C-----
Confidence 45556666666 3 7999999999999999998 7776 56665 8889999999999999999774 4
Q ss_pred eeEEEEeEeccCCcCcccceeeeccccCceEEEE--eCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC-CcEEEEEEcC
Q 011452 167 CRSTRIEYIRRGKPDAGFALFESESLKWPGFVEF--DDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KNVQEIKISP 243 (485)
Q Consensus 167 ~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~F--s~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~-~~V~~VafSp 243 (485)
++++||++..+++. .++. +...+..++| + |+|++|++++.|++|+|||+.+++++.++.. ..+.++.+++
T Consensus 108 -g~v~iwd~~~~~~~---~~~~--~~~~v~~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 108 -KTAKMWDLSSNQAI---QIAQ--HDAPVKTIHWIKA-PNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 180 (368)
T ss_dssp -SEEEEEETTTTEEE---EEEE--CSSCEEEEEEEEC-SSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred -CcEEEEEcCCCCce---eecc--ccCceEEEEEEeC-CCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC
Confidence 59999999888762 2333 4456778999 6 7999999999999999999999998888864 5788888887
Q ss_pred CceEEEEEcCCCCeeEEEEecCCCeEEEEe-e-cCCcceeEEEEEecCCCE----EEEEeCCCcEEEEECCCC---eeEE
Q 011452 244 GIMLLIFTKASGHVPLKILSIEDGTVLKSF-N-HLLHRNKKVDFIEQFNEK----LLVKQENENLQILDVRNF---ELTE 314 (485)
Q Consensus 244 g~~ll~sss~~~D~tIklWdi~tG~~L~tl-~-~~~~~~~~V~f~~~~~~~----lls~s~D~tIkIWDv~tg---~~~~ 314 (485)
...++ +. .++.+++|++..+...... . .+.+....+.+.. +... +++++.|++|+|||+++. +++.
T Consensus 181 ~~~~~-~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 181 PMAVV-AT---AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp TEEEE-EE---GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred CeeEE-Ee---CCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 64443 32 3479999999887654333 2 2334455666642 2332 888999999999999988 6677
Q ss_pred ecccCCC------------ceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEE
Q 011452 315 VSRTEFM------------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 380 (485)
Q Consensus 315 ~l~gh~~------------~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~L 380 (485)
.+.+|.. .|.+++|+|++++|++++ |++|+|||++ ++++.++.+|... |.+++|+|||++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l 330 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQP-----ISACCFNHNGNIF 330 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSC-----EEEEEECTTSSCE
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCC-----ceEEEECCCCCeE
Confidence 7788876 799999999999999999 9999999996 9999999999887 9999999999999
Q ss_pred EEEecCCCCCCCCcCCCCeEEEEeCCCCeEE
Q 011452 381 ISYCKADSDDPLAEGNAGSINISNILTGKCL 411 (485)
Q Consensus 381 aS~s~d~~~d~~~~~~DgtIklWdl~TGk~l 411 (485)
|+++.| +.+..+++|+.+..+.+
T Consensus 331 ~~~s~d--------~~~~~~~~~~~~~~~~i 353 (368)
T 3mmy_A 331 AYASSY--------DWSKGHEFYNPQKKNYI 353 (368)
T ss_dssp EEEECC--------CSTTCGGGCCTTSCCEE
T ss_pred EEEecc--------cccccccccCCCcccee
Confidence 999972 12344556666555444
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.4e-35 Score=297.45 Aligned_cols=313 Identities=11% Similarity=0.082 Sum_probs=241.8
Q ss_pred EEeCCCeEEeeec--ccC--cEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccc
Q 011452 110 ALAQSGVCAAFCR--ETN--QRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFA 185 (485)
Q Consensus 110 s~s~dgtiklW~~--~tG--~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~ 185 (485)
+++.++.+++|.+ +++ +.+..+.. +. .+.+++|+|++..++++ +.+ +++.+|++.+|++....+
T Consensus 94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~-~~-~~~~~~~s~~~~~~~~~----~~~------~~i~~~d~~~g~~~~~~~ 161 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGITHRFISRFKT-GF-QPKSVRFIDNTRLAIPL----LED------EGMDVLDINSGQTVRLSP 161 (433)
T ss_dssp SSGGGGTTCEEECCBTTCSEEEEEEEEC-SS-CBCCCEESSSSEEEEEB----TTS------SSEEEEETTTCCEEEECC
T ss_pred cccCCCceEEEEECCCCCcceEEEEEcC-CC-CceEEEEeCCCeEEEEe----CCC------CeEEEEECCCCeEeeecC
Confidence 4567775566554 335 66666655 33 46699999966655552 234 589999998888732111
Q ss_pred eee-eccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCce-EEEEEcCCCCeeEEE
Q 011452 186 LFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIM-LLIFTKASGHVPLKI 261 (485)
Q Consensus 186 lf~-~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~-ll~sss~~~D~tIkl 261 (485)
.-. ..+...+..++|+ ++|+++++++.|++|++||+++++++.++. ...+.+++|+|++. ++++++ .|++|++
T Consensus 162 ~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~i~~ 238 (433)
T 3bws_A 162 PEKYKKKLGFVETISIP-EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW--ISEDISV 238 (433)
T ss_dssp CHHHHTTCCEEEEEEEG-GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET--TTTEEEE
T ss_pred cccccccCCceeEEEEc-CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec--CCCcEEE
Confidence 000 1234456679996 799999999999999999999999988885 56899999998654 445543 3579999
Q ss_pred EecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEe--------CCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCc
Q 011452 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ--------ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQ 333 (485)
Q Consensus 262 Wdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s--------~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~ 333 (485)
||+.+|+++.++..+ ..+..++|+ |++..+++++ .|++|++||+++++++..+ .|...+..++|+|+|+
T Consensus 239 ~d~~~~~~~~~~~~~-~~~~~~~~~-~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 239 IDRKTKLEIRKTDKI-GLPRGLLLS-KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTEN 315 (433)
T ss_dssp EETTTTEEEEECCCC-SEEEEEEEC-TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTT
T ss_pred EECCCCcEEEEecCC-CCceEEEEc-CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCC
Confidence 999999999999865 457889996 6788888876 4889999999999988876 5666899999999996
Q ss_pred -EEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCC----CCCCcCCCCeEEEEeCC
Q 011452 334 -LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSD----DPLAEGNAGSINISNIL 406 (485)
Q Consensus 334 -llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~----d~~~~~~DgtIklWdl~ 406 (485)
++++++ |++|++||++ ++++..+. |... +..++|+|||++|++++.+... -...++.||+|++||+.
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~-----~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDK-----PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSS-----EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEec-CCCC-----CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 556767 9999999996 88888886 4444 8999999999999998862100 01233457899999999
Q ss_pred CCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecC-CCcEEEccC
Q 011452 407 TGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNR-HGLVHVWSN 485 (485)
Q Consensus 407 TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~-DgtVklWd~ 485 (485)
+++++..+.++. .+.+++|+|||+.|++++. |++|++|++
T Consensus 390 ~~~~~~~~~~~~---------------------------------------~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 390 TDTVKEFWEAGN---------------------------------------QPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp TTEEEEEEECSS---------------------------------------SEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEecCCC---------------------------------------CCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 999999998754 7899999999999998875 999999983
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-36 Score=305.80 Aligned_cols=279 Identities=11% Similarity=0.138 Sum_probs=226.1
Q ss_pred cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCC---cCcccceeee-------------------------
Q 011452 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGK---PDAGFALFES------------------------- 189 (485)
Q Consensus 138 ~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~---~~~~~~lf~~------------------------- 189 (485)
++.+|+|||||++|++++ + ..+.+|++.+|+ ... .|..
T Consensus 6 p~~~v~~s~dg~~l~~~~----~-------~~i~v~d~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAII----K-------NCILSFKYQSPNHWEFAG---KWSDDFDKIQESRNTTAKEQQGQSSENEN 71 (450)
T ss_dssp CCCEEEECSSSSEEEEEE----T-------TEEEEEEEETTTEEEEEE---EEECCC-----------------------
T ss_pred cEEEEEecCCCCEEEEEe----C-------CeEEEEECCCCCcceeee---ecCCccccccccccccchhhccccccccc
Confidence 688999999999776643 3 389999999998 311 1110
Q ss_pred ----------------------------ccccCceEEEEeCCCCeEE-EEeeCCCcEEEeecC--CCeEEEEEc----CC
Q 011452 190 ----------------------------ESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLK--NYTMLYSIS----DK 234 (485)
Q Consensus 190 ----------------------------~~~~~~~~V~Fs~pnG~~L-as~s~D~tiKlWdl~--~g~~l~tl~----~~ 234 (485)
.+...+..++|+ |+|++| ++++.|++|+|||+. +++++..+. ..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 150 (450)
T 2vdu_B 72 ENKKLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLT-SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSK 150 (450)
T ss_dssp ----------------------------CCCCCEEEEEEC-TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSS
T ss_pred cccccccCcCccccccCccccCCCCCCCccCCceEEEEEc-CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCC
Confidence 011246789998 799996 999999999999999 888887763 36
Q ss_pred cEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEE----EeecCCcceeEEEEEecC---CCEEEEEeCCCcEEEEEC
Q 011452 235 NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLK----SFNHLLHRNKKVDFIEQF---NEKLLVKQENENLQILDV 307 (485)
Q Consensus 235 ~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~----tl~~~~~~~~~V~f~~~~---~~~lls~s~D~tIkIWDv 307 (485)
.|.+|+|+|++.++++++. |+.|++|++.+++... ++.+|...+..|+|+ |+ +..|++++.|++|+|||+
T Consensus 151 ~v~~~~~sp~~~~l~~~~~--~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADK--FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLI-KDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp CEEEEEECTTSSEEEEEET--TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEE-ECTTSCEEEEEEETTSCEEEEEE
T ss_pred CceEEEEcCCCCEEEEEeC--CCcEEEEecCCcccccccceeeecccCceEEEEEc-CCCCCCcEEEEEcCCCcEEEEEC
Confidence 8999999997766666543 5899999999988665 888999999999998 55 667888899999999999
Q ss_pred CCCeeEEe-cccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCC--------------------CC
Q 011452 308 RNFELTEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLW--------------------HP 364 (485)
Q Consensus 308 ~tg~~~~~-l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~--------------------~~ 364 (485)
++++++.. +.+|...|.+++|+ ++++|+|++ |++|+|||++ |+++.++..|... ..
T Consensus 228 ~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 99998887 67999999999999 999999999 9999999996 9999999754200 01
Q ss_pred CCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeC--CCC---eEEEEecCCCCCCCCcccccCCCCCCCCccc
Q 011452 365 DCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNI--LTG---KCLAKIRASNGLPAENECSCSGDYSSGSCNV 439 (485)
Q Consensus 365 ~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl--~TG---k~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~ 439 (485)
...|.+|+|+|||++|++++. .|++|+|||+ .++ +++.++.+|.
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~----------~d~~i~iw~~~~~~~~~l~~~~~~~~~~--------------------- 355 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVE----------ATKCIIILEMSEKQKGDLALKQIITFPY--------------------- 355 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEET----------TCSEEEEEEECSSSTTCEEEEEEEECSS---------------------
T ss_pred eEEEEEEEEeCCCCEEEEEEC----------CCCeEEEEEeccCCCCceeeccEeccCC---------------------
Confidence 123899999999999999983 2799999999 777 8899998874
Q ss_pred cccccccccccchhcccCCeEEEEEcCCCCEEEEecC------CCcEEEcc
Q 011452 440 KKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNR------HGLVHVWS 484 (485)
Q Consensus 440 ~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~------DgtVklWd 484 (485)
.|++++|+|++..++.++. +..|+||.
T Consensus 356 ------------------~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 356 ------------------NVISLSAHNDEFQVTLDNKESSGVQKNFAKFIE 388 (450)
T ss_dssp ------------------CEEEEEEETTEEEEEECCTTCCSSCCCSEEEEE
T ss_pred ------------------ceEEEEecCCcEEEEEecccCCCCCCcceEEEE
Confidence 7999999997655655554 55688885
No 109
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.5e-37 Score=312.51 Aligned_cols=223 Identities=15% Similarity=0.134 Sum_probs=169.5
Q ss_pred EeCCCCeEEEEeeCCCcEEEeecCCCeEEEE-----E--cCCcEEEEEEcC--------CceEEEEEcCCCCeeEEEEec
Q 011452 200 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-----I--SDKNVQEIKISP--------GIMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 200 Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~t-----l--~~~~V~~VafSp--------g~~ll~sss~~~D~tIklWdi 264 (485)
+.++++.+||+++.|++|||||++++++... + |.+.|++|+|+| ++.++++++. |+||||||+
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~--D~tv~~Wd~ 173 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD--DCTLIIWRL 173 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET--TSEEEEEEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC--CCeEEEEEC
Confidence 3357899999999999999999999876432 2 345899999997 6677777654 589999999
Q ss_pred CCCeEEEEeecCCcceeEEEEEecCC-CEEEEEeCCCcEEEEECCCCeeEEe-------------------------ccc
Q 011452 265 EDGTVLKSFNHLLHRNKKVDFIEQFN-EKLLVKQENENLQILDVRNFELTEV-------------------------SRT 318 (485)
Q Consensus 265 ~tG~~L~tl~~~~~~~~~V~f~~~~~-~~lls~s~D~tIkIWDv~tg~~~~~-------------------------l~g 318 (485)
+++.++..+.+|...+.+|+|+ |++ .+|++++.|++|+|||+++++.... ..+
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~-p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFR-PSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEE-TTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCCceeeeecCCCCCcEEEEEC-CCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 9999988888888999999998 445 4677889999999999999875433 246
Q ss_pred CCCceEEEEEc-CCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCC-------------------
Q 011452 319 EFMTPSAFIFL-YENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSD------------------- 376 (485)
Q Consensus 319 h~~~v~avaFs-pdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpD------------------- 376 (485)
|...+.+++|+ |||++|++++ |++|++||+. ++....+.+|... +..+.++|+
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK-----LGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCc-----cccEEEccccccccccCcceeEEEccCC
Confidence 88889999986 8999999999 9999999996 8888888888765 555555543
Q ss_pred -CCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcc
Q 011452 377 -QDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEA 455 (485)
Q Consensus 377 -G~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (485)
+.++++|+. ||+|+|||+.+|+++.++.+|..
T Consensus 328 ~~~~~~sgs~-----------Dg~V~lwd~~~~~~~~~~~~~~~------------------------------------ 360 (393)
T 4gq1_A 328 MDYFATAHSQ-----------HGLIQLINTYEKDSNSIPIQLGM------------------------------------ 360 (393)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTCTTCCEEEEECSS------------------------------------
T ss_pred CCEEEEEECC-----------CCEEEEEECCCCcEEEEecCCCC------------------------------------
Confidence 446677665 89999999999999999988872
Q ss_pred cCCeEEEEEcCCCCEEEEecCCCc
Q 011452 456 LEDITALFYDEDRNEIYTGNRHGL 479 (485)
Q Consensus 456 l~~V~sl~fspDg~~LaSgs~Dgt 479 (485)
.|++|+|||||+.||+|+.||.
T Consensus 361 --~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 361 --PIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp --CEEEEEECTTSSEEEEEESSEE
T ss_pred --cEEEEEEcCCCCEEEEEeCCCe
Confidence 8999999999999999998885
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-37 Score=334.77 Aligned_cols=255 Identities=9% Similarity=0.041 Sum_probs=205.8
Q ss_pred cccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCC
Q 011452 136 DEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS 215 (485)
Q Consensus 136 ~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~ 215 (485)
..+|.+|+|||||++|||+| .| +|++ +...++. ++ +|.+.++.|+|+ |+| .|+
T Consensus 15 ~~~v~sv~~SpDG~~iASas----~D------~TV~--d~~~~~~------l~-gh~~~v~~V~Fs-Pdg-------~~~ 67 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTF----PD------ISIG--QPKYAKD------IN-CNSKNLFHVKEF-PLE-------FEN 67 (588)
T ss_dssp SSSSCCEEECTTSCEEEECS----SS------EEEE--EECCCSC------CS-SBGGGTEEEEEE-CCC-------CCC
T ss_pred hccEEEEEECCCCCEEEEEc----CC------ceee--cccccce------ec-CCCccEEEEEEC-CCC-------Ccc
Confidence 35899999999999999966 56 6887 5555543 22 466778899998 788 577
Q ss_pred cEEEeecCCCeEEEEE-cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCc-----ceeEEEEEecC
Q 011452 216 IYKVFDLKNYTMLYSI-SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH-----RNKKVDFIEQF 289 (485)
Q Consensus 216 tiKlWdl~~g~~l~tl-~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~-----~~~~V~f~~~~ 289 (485)
++++|+.+. ..+.++ +...|.+|+|||++.++++++ .|++|+|||.++ ++.++. |.. .+.+|+|+ |+
T Consensus 68 ~~~~~~~~~-~~~~~~~~~~~V~~vawSPdG~~LAs~s--~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafS-PD 140 (588)
T 2j04_A 68 KLDFELAQQ-NGLLNSQPVCYPRVCKPSPIDDWMAVLS--NNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWN-PI 140 (588)
T ss_dssp TTTTSCCCS-SCSSTTSCSCCEEEEEECSSSSCEEEEE--TTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEEC-SS
T ss_pred eEEEEeCCC-ceEeecCCCCcEEEEEECCCCCEEEEEe--CCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEc-CC
Confidence 777777542 233333 356899999999777666654 458999999654 888888 554 48899997 78
Q ss_pred CCEEEEEeCCCcEEEEECCCCee-------EEec----ccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-Cc---EE
Q 011452 290 NEKLLVKQENENLQILDVRNFEL-------TEVS----RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE---LV 353 (485)
Q Consensus 290 ~~~lls~s~D~tIkIWDv~tg~~-------~~~l----~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~---ll 353 (485)
|+.|+++++|++|+|||++++++ ++++ .||..+|.+++|+||| +|+++ |++|++||+. ++ .+
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce
Confidence 99999999999999999999863 6675 7788999999999999 55666 9999999997 45 34
Q ss_pred EEee-cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCC
Q 011452 354 TSFE-DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDY 432 (485)
Q Consensus 354 ~tl~-gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~ 432 (485)
++|. +|... |.+|+|+ |++|||++ +++|+|||+.+++......+|.+
T Consensus 219 ~tL~~~h~~~-----V~svaFs--g~~LASa~------------~~tIkLWd~~~~~~~~~~~gh~~------------- 266 (588)
T 2j04_A 219 RMIQNASRRK-----ITDLKIV--DYKVVLTC------------PGYVHKIDLKNYSISSLKTGSLE------------- 266 (588)
T ss_dssp EEEECCCSSC-----CCCEEEE--TTEEEEEC------------SSEEEEEETTTTEEEEEECSCCS-------------
T ss_pred eeecccccCc-----EEEEEEE--CCEEEEEe------------CCeEEEEECCCCeEEEEEcCCCc-------------
Confidence 6784 78766 9999999 69999987 59999999998887544448873
Q ss_pred CCCCccccccccccccccchhcccCCeEEEEE--cCCCCEEEEecCCCcEEEcc
Q 011452 433 SSGSCNVKKHSHASRIRSTVAEALEDITALFY--DEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~f--spDg~~LaSgs~DgtVklWd 484 (485)
.|+.++| +||++.|+++++||+ |||.
T Consensus 267 -------------------------~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 267 -------------------------NFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp -------------------------CCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred -------------------------eEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 8999999 999999999999999 9996
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.6e-36 Score=289.13 Aligned_cols=264 Identities=9% Similarity=0.047 Sum_probs=219.0
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCc---EEEEeecCCcccEEEEEEeeCCC-EEEEEEeecCCCCcccce
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQ---RICFLNVTADEVIRSLFYNKNND-SLITVSVYASDNFSSLRC 167 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~---~l~tl~g~~~~~i~sv~~spdg~-~Las~S~d~~~d~stL~~ 167 (485)
|...|.++.|+ +++||+++.||++++|++.+++ .+..+.+ |...|.+++|+|+|+ .|++++. |
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~----d------ 78 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGTV----Q------ 78 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEET----T------
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEcC----C------
Confidence 55667777777 8999999999999999999887 3444554 888999999999999 9999774 3
Q ss_pred eEEEEeEe-ccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC---------CeEEEEEc-CCcE
Q 011452 168 RSTRIEYI-RRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN---------YTMLYSIS-DKNV 236 (485)
Q Consensus 168 ~t~~lw~i-~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~---------g~~l~tl~-~~~V 236 (485)
+++++|++ ..++. ..+....+...+..++|+ | +.+|++++.|++|++||+.+ ++++.++. ...|
T Consensus 79 g~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~-~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 153 (342)
T 1yfq_A 79 GEILKVDLIGSPSF---QALTNNEANLGICRICKY-G-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKI 153 (342)
T ss_dssp SCEEEECSSSSSSE---EECBSCCCCSCEEEEEEE-T-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCE
T ss_pred CeEEEEEeccCCce---EeccccCCCCceEEEEeC-C-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCce
Confidence 58999999 88765 112210044567789998 5 89999999999999999987 66665554 5689
Q ss_pred EEEEEcCCceEEEEEcCCCCeeEEEEecCC-CeE--EEEeecCCcceeEEEEEec-CCCEEEEEeCCCcEEEEECCCC--
Q 011452 237 QEIKISPGIMLLIFTKASGHVPLKILSIED-GTV--LKSFNHLLHRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNF-- 310 (485)
Q Consensus 237 ~~VafSpg~~ll~sss~~~D~tIklWdi~t-G~~--L~tl~~~~~~~~~V~f~~~-~~~~lls~s~D~tIkIWDv~tg-- 310 (485)
.+++|+|++ +++++ .|++|++||+++ ++. ......|...+..|+|+ | ++..+++++.|++|+|||++.+
T Consensus 154 ~~~~~~~~~-l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 154 FTMDTNSSR-LIVGM---NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL-PKEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp EEEEECSSE-EEEEE---STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC-SGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred EEEEecCCc-EEEEe---CCCeEEEEECCccccccceeeecCCCCceeEEEEC-CCCCCEEEEEecCCcEEEEEEcCCCc
Confidence 999999988 55542 347999999998 653 33444667789999997 6 7889999999999999999987
Q ss_pred ----eeEEecccCCC---------ceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecC-CCCCCCCCeeEEEEC
Q 011452 311 ----ELTEVSRTEFM---------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDH-LLWHPDCNTNNIYIT 374 (485)
Q Consensus 311 ----~~~~~l~gh~~---------~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH-~~~~~~~~v~svafS 374 (485)
+++..+.+|.. .|.+++|+|++++|++++ |++|++||++ ++++.++.+| ... |.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~-----v~~~~-- 301 (342)
T 1yfq_A 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS-----VVKIA-- 301 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSE-----EEEEE--
T ss_pred ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCC-----ceEec--
Confidence 78888888865 999999999999999999 9999999996 9999999998 777 99999
Q ss_pred CCCCEEEEEec
Q 011452 375 SDQDLIISYCK 385 (485)
Q Consensus 375 pDG~~LaS~s~ 385 (485)
|||++|++++.
T Consensus 302 ~~~~~l~s~s~ 312 (342)
T 1yfq_A 302 CSDNILCLATS 312 (342)
T ss_dssp ECSSEEEEEEE
T ss_pred CCCCeEEEEec
Confidence 99999999998
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.9e-36 Score=304.08 Aligned_cols=279 Identities=15% Similarity=0.150 Sum_probs=220.7
Q ss_pred EEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEecc-CCcCcccceeeeccccCceEEEEeCC-CCeEEEEeeCCCcE
Q 011452 140 RSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRR-GKPDAGFALFESESLKWPGFVEFDDV-NGKVLTYSAQDSIY 217 (485)
Q Consensus 140 ~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~-G~~~~~~~lf~~~~~~~~~~V~Fs~p-nG~~Las~s~D~ti 217 (485)
..+++||+...++.. ++.+ +++.||++.. |++......+. +|...+..++|+ | ++++|++++.|++|
T Consensus 38 ~~~~~~~~~~~~~~~---~~~~------g~i~v~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~-p~~~~~l~s~s~dg~v 106 (402)
T 2aq5_A 38 GFCAVNPKFMALICE---ASGG------GAFLVLPLGKTGRVDKNVPLVC-GHTAPVLDIAWC-PHNDNVIASGSEDCTV 106 (402)
T ss_dssp CSEEECSSEEEEEBC---CSSS------CCEEEEETTCCEECCTTCCCBC-CCSSCEEEEEEC-TTCTTEEEEEETTSEE
T ss_pred CcEEECCCeEEEEEE---EcCC------CEEEEEECccCCCCCCCCceEe-cCCCCEEEEEeC-CCCCCEEEEEeCCCeE
Confidence 457788877654431 2344 6999999843 33322222333 355667799998 6 99999999999999
Q ss_pred EEeecCCC-------eEEEEEc--CCcEEEEEEcCCc-eEEEEEcCCCCeeEEEEecCCCeEEEEe--ecCCcceeEEEE
Q 011452 218 KVFDLKNY-------TMLYSIS--DKNVQEIKISPGI-MLLIFTKASGHVPLKILSIEDGTVLKSF--NHLLHRNKKVDF 285 (485)
Q Consensus 218 KlWdl~~g-------~~l~tl~--~~~V~~VafSpg~-~ll~sss~~~D~tIklWdi~tG~~L~tl--~~~~~~~~~V~f 285 (485)
+|||+.++ +++.++. ...|.+|+|+|++ .++++++ .|++|+|||+++|+++.++ .+|...+..++|
T Consensus 107 ~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 184 (402)
T 2aq5_A 107 MVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG--CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDW 184 (402)
T ss_dssp EEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE--TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEE
T ss_pred EEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc--CCCEEEEEECCCCCccEEEecCCCCCceEEEEE
Confidence 99999988 4555664 5689999999975 4555544 4589999999999999999 889999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCeeEEec-ccCCCc-eEEEEEcCCCcEEEEE---e-CCcEEEEeCC-CcE-EEEee
Q 011452 286 IEQFNEKLLVKQENENLQILDVRNFELTEVS-RTEFMT-PSAFIFLYENQLFLTF---R-NRTVAVWNFR-GEL-VTSFE 357 (485)
Q Consensus 286 ~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l-~gh~~~-v~avaFspdg~llaS~---s-D~TIklWd~~-G~l-l~tl~ 357 (485)
+ |++..|++++.|++|+|||+++++++..+ .+|... +..++|+|++++|+++ + |++|++||++ ++. +..+.
T Consensus 185 ~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 263 (402)
T 2aq5_A 185 S-RDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE 263 (402)
T ss_dssp C-TTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE
T ss_pred C-CCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe
Confidence 7 68889999999999999999999999988 788876 8999999999999999 6 9999999996 553 33333
Q ss_pred -cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE-EEEecCCCCCCCCcccccCCCCCCC
Q 011452 358 -DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC-LAKIRASNGLPAENECSCSGDYSSG 435 (485)
Q Consensus 358 -gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~-l~tl~gH~~~~~~~~~~~~~~~~~~ 435 (485)
+|... +..++|+|||++|+.++. .|++|+|||+.+++. +..+..|..
T Consensus 264 ~~~~~~-----v~~~~~s~~~~~l~~~g~----------~dg~i~i~d~~~~~~~~~~l~~~~~---------------- 312 (402)
T 2aq5_A 264 LDTSSG-----VLLPFFDPDTNIVYLCGK----------GDSSIRYFEITSEAPFLHYLSMFSS---------------- 312 (402)
T ss_dssp CCCCSS-----CEEEEEETTTTEEEEEET----------TCSCEEEEEECSSTTCEEEEEEECC----------------
T ss_pred ccCCCc-----eeEEEEcCCCCEEEEEEc----------CCCeEEEEEecCCCcceEeeccccc----------------
Confidence 45544 899999999999975542 279999999999883 777776641
Q ss_pred CccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 436 SCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
. ..|++++|+|||..+++ .|+.+++|++
T Consensus 313 ----------~----------~~v~~~~~sp~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 313 ----------K----------ESQRGMGYMPKRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp ----------S----------SCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred ----------C----------CcccceEEeccccccee--cceeEEEEEc
Confidence 0 28999999999999875 5679999973
No 113
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-35 Score=287.71 Aligned_cols=255 Identities=9% Similarity=0.058 Sum_probs=201.7
Q ss_pred CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC
Q 011452 125 NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN 204 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn 204 (485)
|+++.++.+ |...|.+++|+|+|+.||+++. | ++++||++..+.... ...+. .+...+..++|+ ++
T Consensus 1 G~~~~~~~~-h~~~v~~~~~s~~~~~l~~~~~----d------g~i~iw~~~~~~~~~-~~~~~-~h~~~v~~~~~~-~~ 66 (379)
T 3jrp_A 1 GSMVVIANA-HNELIHDAVLDYYGKRLATCSS----D------KTIKIFEVEGETHKL-IDTLT-GHEGPVWRVDWA-HP 66 (379)
T ss_dssp ----CCEEE-CCCCEEEEEECSSSSEEEEEET----T------SCEEEEEEETTEEEE-EEEEC-CCSSCEEEEEEC-CG
T ss_pred CCccEEecC-CcccEEEEEEcCCCCEEEEEEC----C------CcEEEEecCCCccee-eeEec-CCCCcEEEEEeC-CC
Confidence 566777887 8889999999999999999774 3 589999986332210 11222 245567789997 45
Q ss_pred --CeEEEEeeCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcCC--ceEEEEEcCCCCeeEEEEecCCCe--EEEEee
Q 011452 205 --GKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKNVQEIKISPG--IMLLIFTKASGHVPLKILSIEDGT--VLKSFN 274 (485)
Q Consensus 205 --G~~Las~s~D~tiKlWdl~~g~--~l~tl~--~~~V~~VafSpg--~~ll~sss~~~D~tIklWdi~tG~--~L~tl~ 274 (485)
|++|++++.|++|+|||+.+++ .+..+. ...|.+++|+|+ +.++++++ .|++|++||+.+++ ....+.
T Consensus 67 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~ 144 (379)
T 3jrp_A 67 KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIID 144 (379)
T ss_dssp GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCTTSCCCEEEEE
T ss_pred CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec--CCCcEEEEecCCCCceeeEEec
Confidence 9999999999999999999997 666664 468999999986 65555544 34899999999884 445677
Q ss_pred cCCcceeEEEEEec------------CCCEEEEEeCCCcEEEEECCCCe----eEEecccCCCceEEEEEcCC---CcEE
Q 011452 275 HLLHRNKKVDFIEQ------------FNEKLLVKQENENLQILDVRNFE----LTEVSRTEFMTPSAFIFLYE---NQLF 335 (485)
Q Consensus 275 ~~~~~~~~V~f~~~------------~~~~lls~s~D~tIkIWDv~tg~----~~~~l~gh~~~v~avaFspd---g~ll 335 (485)
+|...+..++|++. ++..+++++.|++|+|||+++++ ++..+.+|...|.+++|+|+ +++|
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeE
Confidence 88899999999753 57889999999999999998764 56778899999999999999 9999
Q ss_pred EEEe-CCcEEEEeCC-Cc---EEEEee--cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCC
Q 011452 336 LTFR-NRTVAVWNFR-GE---LVTSFE--DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTG 408 (485)
Q Consensus 336 aS~s-D~TIklWd~~-G~---ll~tl~--gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TG 408 (485)
++++ |++|+|||++ ++ ....+. .|... |.+++|+|||++|++++. ||+|+|||+.++
T Consensus 225 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~~~~~-----------dg~i~iw~~~~~ 288 (379)
T 3jrp_A 225 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGG-----------DNKVTLWKENLE 288 (379)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC-----EEEEEECSSSCCEEEEES-----------SSSEEEEEEEET
T ss_pred EEEeCCCEEEEEeCCCCCccceeeeeccccCCCc-----EEEEEEcCCCCEEEEecC-----------CCcEEEEeCCCC
Confidence 9999 9999999996 53 233333 35544 999999999999999987 799999999865
Q ss_pred eEE
Q 011452 409 KCL 411 (485)
Q Consensus 409 k~l 411 (485)
...
T Consensus 289 ~~~ 291 (379)
T 3jrp_A 289 GKW 291 (379)
T ss_dssp TEE
T ss_pred Ccc
Confidence 433
No 114
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.6e-36 Score=300.17 Aligned_cols=271 Identities=10% Similarity=0.107 Sum_probs=215.6
Q ss_pred EEEEEeCCCeEEeeecccC-c---EEEEeecCCcccEEEEEEee-CCCEEEEEEeecCCCCcccceeEEEEeEeccCCcC
Q 011452 107 IVFALAQSGVCAAFCRETN-Q---RICFLNVTADEVIRSLFYNK-NNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD 181 (485)
Q Consensus 107 ~ias~s~dgtiklW~~~tG-~---~l~tl~g~~~~~i~sv~~sp-dg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~ 181 (485)
++++++.||++++|+..+. + .+.++.+ |...|.+++|+| +++.||+++. | ++++||++..+++.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s~----d------g~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCG-HTAPVLDIAWCPHNDNVIASGSE----D------CTVMVWEIPDGGLV 117 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCC-CSSCEEEEEECTTCTTEEEEEET----T------SEEEEEECCTTCCS
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEec-CCCCEEEEEeCCCCCCEEEEEeC----C------CeEEEEEccCCCCc
Confidence 3445789999999998653 2 3445655 888999999999 9999999774 4 59999999888542
Q ss_pred c----ccceeeeccccCceEEEEeCCCC-eEEEEeeCCCcEEEeecCCCeEEEEE----cCCcEEEEEEcCCceEEEEEc
Q 011452 182 A----GFALFESESLKWPGFVEFDDVNG-KVLTYSAQDSIYKVFDLKNYTMLYSI----SDKNVQEIKISPGIMLLIFTK 252 (485)
Q Consensus 182 ~----~~~lf~~~~~~~~~~V~Fs~pnG-~~Las~s~D~tiKlWdl~~g~~l~tl----~~~~V~~VafSpg~~ll~sss 252 (485)
. ....+. ++...+..|+|+ |+| .+|++++.|++|+|||+.+++++.++ +...|.+++|+|++.++++++
T Consensus 118 ~~~~~~~~~~~-~h~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 118 LPLREPVITLE-GHTKRVGIVAWH-PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp SCBCSCSEEEE-CCSSCEEEEEEC-SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred cccCCceEEec-CCCCeEEEEEEC-cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 1 011222 355667789998 787 69999999999999999999999999 356899999998666555544
Q ss_pred CCCCeeEEEEecCCCeEEEEe-ecCCcc-eeEEEEEecCCCEEEEE---eCCCcEEEEECCCCee-EEec-ccCCCceEE
Q 011452 253 ASGHVPLKILSIEDGTVLKSF-NHLLHR-NKKVDFIEQFNEKLLVK---QENENLQILDVRNFEL-TEVS-RTEFMTPSA 325 (485)
Q Consensus 253 ~~~D~tIklWdi~tG~~L~tl-~~~~~~-~~~V~f~~~~~~~lls~---s~D~tIkIWDv~tg~~-~~~l-~gh~~~v~a 325 (485)
.|++|+|||+++|+++.++ .+|.+. +..+.|+ +++..|+++ +.|++|+|||+++++. +... ..|...+.+
T Consensus 196 --~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 196 --RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV-SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp --TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC-STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred --cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc-CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence 4589999999999999999 677665 7899997 666666666 6999999999998764 3322 357778999
Q ss_pred EEEcCCCcEEE-EEe-CCcEEEEeCC-Cc-EEEEeecCC--CCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCe
Q 011452 326 FIFLYENQLFL-TFR-NRTVAVWNFR-GE-LVTSFEDHL--LWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGS 399 (485)
Q Consensus 326 vaFspdg~lla-S~s-D~TIklWd~~-G~-ll~tl~gH~--~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dgt 399 (485)
++|+|++++|+ +++ |++|++||++ ++ ++..+..|. .. |.+++|+|||.+++++ +++
T Consensus 273 ~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~-----v~~~~~sp~~~~~~s~-------------~~~ 334 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKES-----QRGMGYMPKRGLEVNK-------------CEI 334 (402)
T ss_dssp EEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSC-----CSEEEECCGGGSCGGG-------------TEE
T ss_pred EEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCc-----ccceEEecccccceec-------------cee
Confidence 99999999986 566 9999999996 66 366776664 34 8999999999999864 579
Q ss_pred EEEEeCCCCeEE
Q 011452 400 INISNILTGKCL 411 (485)
Q Consensus 400 IklWdl~TGk~l 411 (485)
+++|++.++++.
T Consensus 335 ~~~~~l~~~~~~ 346 (402)
T 2aq5_A 335 ARFYKLHERKCE 346 (402)
T ss_dssp EEEEEEETTEEE
T ss_pred EEEEEcCCCcEE
Confidence 999999998764
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-36 Score=293.97 Aligned_cols=265 Identities=11% Similarity=0.057 Sum_probs=203.6
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCccc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~ 184 (485)
+.+||+++.||+|++||+++|+.+.++. ...|+++.|+|+ |+++| .| +++++|+.. +
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s----~D------~~i~~w~~~-~------ 104 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRG----PC------NRLLLLYPG-N------ 104 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEEC----ST------TEEEEEETT-T------
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEec----CC------CeEEEEEcc-C------
Confidence 6889999999999999999888888775 234666777776 55544 33 466666631 0
Q ss_pred ceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc---CCcEEEEEEcC--CceEEEEEcCCCCeeE
Q 011452 185 ALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS---DKNVQEIKISP--GIMLLIFTKASGHVPL 259 (485)
Q Consensus 185 ~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~---~~~V~~VafSp--g~~ll~sss~~~D~tI 259 (485)
.+.+||+.+++++..+. ...|.+++|+| ++.++++++ .|++|
T Consensus 105 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s--~dg~i 151 (343)
T 3lrv_A 105 -------------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWAD--NRGTI 151 (343)
T ss_dssp -------------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEE--TTCCE
T ss_pred -------------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe--CCCcE
Confidence 34456666777665553 25799999999 887777665 45899
Q ss_pred EEEecCCCeEEEEeec-CCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE-Eeccc-CCCceEEEEEcCCCcEEE
Q 011452 260 KILSIEDGTVLKSFNH-LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELT-EVSRT-EFMTPSAFIFLYENQLFL 336 (485)
Q Consensus 260 klWdi~tG~~L~tl~~-~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~-~~l~g-h~~~v~avaFspdg~lla 336 (485)
+|||+++|+++..+.. |...+..++|+ |++..|++++.|++|+|||+++++++ ..+.+ |...|.+++|+|+|++|+
T Consensus 152 ~~wd~~~~~~~~~~~~~~~~~i~~~~~~-pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~ 230 (343)
T 3lrv_A 152 GFQSYEDDSQYIVHSAKSDVEYSSGVLH-KDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMV 230 (343)
T ss_dssp EEEESSSSCEEEEECCCSSCCCCEEEEC-TTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEE
T ss_pred EEEECCCCcEEEEEecCCCCceEEEEEC-CCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEE
Confidence 9999999999888753 44478899997 67888888999999999999999988 78888 999999999999999999
Q ss_pred EEeCCcEEEEeCC-CcEEEEeec---CCCCCCCCCee--EEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 337 TFRNRTVAVWNFR-GELVTSFED---HLLWHPDCNTN--NIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 337 S~sD~TIklWd~~-G~ll~tl~g---H~~~~~~~~v~--svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
+++|++|+|||++ ++++.+++. |... +. .++|+|+|++|++++. .|++|+||++.+++.
T Consensus 231 s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~s~----------~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 231 VECDQTVVCFDLRKDVGTLAYPTYTIPEFK-----TGTVTYDIDDSGKNMIAYSN----------ESNSLTIYKFDKKTK 295 (343)
T ss_dssp EEESSBEEEEETTSSTTCBSSCCCBC----------CCEEEEECTTSSEEEEEET----------TTTEEEEEEECTTTC
T ss_pred EEeCCeEEEEEcCCCCcceeeccccccccc-----ccceEEEECCCCCEEEEecC----------CCCcEEEEEEccccc
Confidence 9996699999996 777666554 4433 44 5999999999999875 269999999865432
Q ss_pred EEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcC---CCCEEEEecCCCcEEEc
Q 011452 411 LAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDE---DRNEIYTGNRHGLVHVW 483 (485)
Q Consensus 411 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fsp---Dg~~LaSgs~DgtVklW 483 (485)
.... ..+..++|+| +++.|++++.|+++++|
T Consensus 296 ~~~~------------------------------------------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 296 NWTK------------------------------------------DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp SEEE------------------------------------------EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred ceEe------------------------------------------cCceeEecCccccccceeEEEecCCceEEE
Confidence 2221 1577889999 99999999999999987
No 116
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=4.1e-34 Score=306.28 Aligned_cols=310 Identities=9% Similarity=0.049 Sum_probs=247.7
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEe--ccCCcCc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYI--RRGKPDA 182 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i--~~G~~~~ 182 (485)
+.++++.+.|+++++||..+|+++.++..++. +++++|||||++|++++.+ + ++.+||+ .++++..
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d---~-------~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRD---A-------RIDMIDLWAKEPTKVA 216 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETT---S-------EEEEEETTSSSCEEEE
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCC---C-------eEEEEECcCCCCcEEE
Confidence 88999999999999999999999999985454 8999999999999998742 3 8999998 6776522
Q ss_pred ccceeeeccccCceEEEEeCC----CCeEEEEee-CCCcEEEeecCCCeEEEEEcC-------------CcEEEEEEcC-
Q 011452 183 GFALFESESLKWPGFVEFDDV----NGKVLTYSA-QDSIYKVFDLKNYTMLYSISD-------------KNVQEIKISP- 243 (485)
Q Consensus 183 ~~~lf~~~~~~~~~~V~Fs~p----nG~~Las~s-~D~tiKlWdl~~g~~l~tl~~-------------~~V~~VafSp- 243 (485)
.+. .-..|..|+|+ | ||++|++++ .|++|+|||..+++++.++.. ..|.+|+|||
T Consensus 217 ---~i~--~g~~p~~va~s-p~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 217 ---EIK--IGIEARSVESS-KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp ---EEE--CCSEEEEEEEC-CSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred ---EEe--cCCCcceEEeC-CCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 122 23457799998 8 999998887 489999999999999988752 2689999998
Q ss_pred CceEEEEEcCCCCeeEEEEecCCCeEEE--EeecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEeccc--
Q 011452 244 GIMLLIFTKASGHVPLKILSIEDGTVLK--SFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRT-- 318 (485)
Q Consensus 244 g~~ll~sss~~~D~tIklWdi~tG~~L~--tl~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~g-- 318 (485)
+..++++.. .+++|.+||+.+++.++ ++. +......++|+ |++.+++++ ..|++|++||+++++++.++..
T Consensus 291 ~~~~~vs~~--~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~s-pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~ 366 (543)
T 1nir_A 291 HPEFIVNVK--ETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWD-SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK 366 (543)
T ss_dssp SSEEEEEET--TTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEEC-TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEEC--CCCeEEEEEecCCCcceeEEec-cCcCccCceEC-CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC
Confidence 566666544 45899999999988765 454 44567789996 788888776 4799999999999999988764
Q ss_pred --CCCceEEEEEcCC-CcEEEEEe--CCcEEEEeC-C-------CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 319 --EFMTPSAFIFLYE-NQLFLTFR--NRTVAVWNF-R-------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 319 --h~~~v~avaFspd-g~llaS~s--D~TIklWd~-~-------G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
|......+ ++|+ |++++|++ |++|+|||. . +++++++++|..+ +..|+|+|||++|.+++.
T Consensus 367 ~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-----~~~v~~~pdg~~l~v~~~ 440 (543)
T 1nir_A 367 TPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-----SLFIKTHPKSSHLYVDTT 440 (543)
T ss_dssp SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-----CCCEECCTTCCEEEECCT
T ss_pred CCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC-----ceEEEcCCCCCcEEEecC
Confidence 65555555 4666 88899885 899999998 4 7899999999876 788999999999999862
Q ss_pred CCCCCCCCcCCCCeEEEEeCCCCeEE-EEe--------cCCCCCCCCcccccCCCCCCCCccccccccccccccchhccc
Q 011452 386 ADSDDPLAEGNAGSINISNILTGKCL-AKI--------RASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEAL 456 (485)
Q Consensus 386 d~~~d~~~~~~DgtIklWdl~TGk~l-~tl--------~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 456 (485)
-.++ ...+++|.|||+.|++++ ..| ..|.
T Consensus 441 ~~~~----~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~-------------------------------------- 478 (543)
T 1nir_A 441 FNPD----ARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA-------------------------------------- 478 (543)
T ss_dssp TCSS----HHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC--------------------------------------
T ss_pred CCCC----cccCceEEEEECCCCCCCeEEeechhhcccCCCC--------------------------------------
Confidence 0000 001589999999999988 554 2222
Q ss_pred CCeEEEEEcCCCCEEEEe-----cCCCcEEEcc
Q 011452 457 EDITALFYDEDRNEIYTG-----NRHGLVHVWS 484 (485)
Q Consensus 457 ~~V~sl~fspDg~~LaSg-----s~DgtVklWd 484 (485)
..|..++|+|||++|+.+ +.|++|.|||
T Consensus 479 ~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 479 KRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp CEEEEEEECSSSSEEEEEEECCTTSCCEEEEEE
T ss_pred CceEeccCCCCCCEEEEEeecCCCCCCeEEEEE
Confidence 388999999999999966 3589999998
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-36 Score=294.44 Aligned_cols=224 Identities=9% Similarity=0.063 Sum_probs=190.0
Q ss_pred CCCeEEEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEec---------CCCeEEEEe
Q 011452 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSI---------EDGTVLKSF 273 (485)
Q Consensus 203 pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi---------~tG~~L~tl 273 (485)
+++.+|++|+.|++|+|||+++++++.++....|.+++|+|. ++ ++ +.|++|++|+. +++++++.+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~--~~-s~--s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA--II-SR--GPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS--EE-EE--CSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc--eE-Ee--cCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 478999999999999999999999988887778889999998 44 43 34589999954 477777777
Q ss_pred e-cCCcceeEEEEEec--CCCEEEEEeCCCcEEEEECCCCeeEEecc-cCCCceEEEEEcCCCcEEEEEe-CCcEEEEeC
Q 011452 274 N-HLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNFELTEVSR-TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF 348 (485)
Q Consensus 274 ~-~~~~~~~~V~f~~~--~~~~lls~s~D~tIkIWDv~tg~~~~~l~-gh~~~v~avaFspdg~llaS~s-D~TIklWd~ 348 (485)
. +|...+..++|+ | ++..+++++.|++|+|||+++++++.... .|...+.+++|+|||++||+++ |++|+|||+
T Consensus 121 ~~~~~~~v~~~~~~-~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 121 EVDSANEIIYMYGH-NEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp ECCCSSCEEEEECC-C---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred ecCCCCCEEEEEcC-CCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 6 666789999997 5 78889999999999999999999987764 4555899999999999999999 999999999
Q ss_pred C-CcEE-EEeec-CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcc
Q 011452 349 R-GELV-TSFED-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENE 425 (485)
Q Consensus 349 ~-G~ll-~tl~g-H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~ 425 (485)
+ ++++ .+|++ |... |.+|+|+|||++|++++. ++|+|||+.+++++.++..+...
T Consensus 200 ~~~~~~~~~~~~~h~~~-----v~~l~fs~~g~~l~s~~~------------~~v~iwd~~~~~~~~~~~~~~~~----- 257 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAK-----IKEVKFADNGYWMVVECD------------QTVVCFDLRKDVGTLAYPTYTIP----- 257 (343)
T ss_dssp SCTTSCCEECCCCTTSC-----EEEEEECTTSSEEEEEES------------SBEEEEETTSSTTCBSSCCCBC------
T ss_pred CCCCCCccEEeccCCCC-----EEEEEEeCCCCEEEEEeC------------CeEEEEEcCCCCcceeecccccc-----
Confidence 6 8887 89998 9877 999999999999999983 59999999999988777764320
Q ss_pred cccCCCCCCCCccccccccccccccchhcccCCe--EEEEEcCCCCEEEEecC-CCcEEEcc
Q 011452 426 CSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDI--TALFYDEDRNEIYTGNR-HGLVHVWS 484 (485)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V--~sl~fspDg~~LaSgs~-DgtVklWd 484 (485)
. ..+ .+++|+|+|+.|++|+. |+.|+||+
T Consensus 258 -------------------~-----------~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 258 -------------------E-----------FKTGTVTYDIDDSGKNMIAYSNESNSLTIYK 289 (343)
T ss_dssp ----------------------------------CCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred -------------------c-----------ccccceEEEECCCCCEEEEecCCCCcEEEEE
Confidence 0 022 46999999999999998 99999996
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3e-33 Score=276.83 Aligned_cols=254 Identities=10% Similarity=0.100 Sum_probs=210.9
Q ss_pred eEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEE-EEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCc
Q 011452 168 RSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGI 245 (485)
Q Consensus 168 ~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~L-as~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~ 245 (485)
+++++|++.+|++.. .+.. -..+..++|+ |+|+.| ++++.|++|++||+.+++++.++. ...|.+++|+|++
T Consensus 12 ~~v~v~d~~~~~~~~---~~~~--~~~~~~~~~s-~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg 85 (391)
T 1l0q_A 12 DNISVIDVTSNKVTA---TIPV--GSNPMGAVIS-PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG 85 (391)
T ss_dssp TEEEEEETTTTEEEE---EEEC--SSSEEEEEEC-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS
T ss_pred CEEEEEECCCCeEEE---Eeec--CCCcceEEEC-CCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCC
Confidence 599999998887622 3332 2346789998 799866 788899999999999999998886 4589999999866
Q ss_pred e-EEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEE-EEeCCCcEEEEECCCCeeEEecccCCCce
Q 011452 246 M-LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLL-VKQENENLQILDVRNFELTEVSRTEFMTP 323 (485)
Q Consensus 246 ~-ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~ll-s~s~D~tIkIWDv~tg~~~~~l~gh~~~v 323 (485)
. ++++++ .|++|++||+++|+++..+.++ ..+..++|+ |++..++ +++.|++|++||+.+++++..+..|. .+
T Consensus 86 ~~l~~~~~--~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~ 160 (391)
T 1l0q_A 86 KQVYVTNM--ASSTLSVIDTTSNTVAGTVKTG-KSPLGLALS-PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SP 160 (391)
T ss_dssp SEEEEEET--TTTEEEEEETTTTEEEEEEECS-SSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SE
T ss_pred CEEEEEEC--CCCEEEEEECCCCeEEEEEeCC-CCcceEEEC-CCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-Cc
Confidence 5 445543 3489999999999999999865 467899996 6777774 56789999999999999999987764 67
Q ss_pred EEEEEcCCCcEE-EEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeE
Q 011452 324 SAFIFLYENQLF-LTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSI 400 (485)
Q Consensus 324 ~avaFspdg~ll-aS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtI 400 (485)
..++|+|+|+.| ++++ |++|++||++ ++++..+..+. . +..++|+|||++|++++. .+.+++|
T Consensus 161 ~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~-----~~~~~~~~~g~~l~~~~~--------~~~~~~v 226 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-A-----PSGIAVNPEGTKAYVTNV--------DKYFNTV 226 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-E-----EEEEEECTTSSEEEEEEE--------CSSCCEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-C-----ccceEECCCCCEEEEEec--------CcCCCcE
Confidence 999999999877 6777 9999999996 88888887543 3 889999999999999874 1127999
Q ss_pred EEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEE-EEecCCCc
Q 011452 401 NISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEI-YTGNRHGL 479 (485)
Q Consensus 401 klWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~L-aSgs~Dgt 479 (485)
++||+.+++++.++..|. .+.+++|+|||+.| ++++.|++
T Consensus 227 ~~~d~~~~~~~~~~~~~~---------------------------------------~~~~~~~s~dg~~l~~s~~~d~~ 267 (391)
T 1l0q_A 227 SMIDTGTNKITARIPVGP---------------------------------------DPAGIAVTPDGKKVYVALSFXNT 267 (391)
T ss_dssp EEEETTTTEEEEEEECCS---------------------------------------SEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEECCCCeEEEEEecCC---------------------------------------CccEEEEccCCCEEEEEcCCCCE
Confidence 999999999999998875 67899999999987 78899999
Q ss_pred EEEccC
Q 011452 480 VHVWSN 485 (485)
Q Consensus 480 VklWd~ 485 (485)
|++||.
T Consensus 268 v~v~d~ 273 (391)
T 1l0q_A 268 VSVIDT 273 (391)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999984
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.5e-34 Score=287.68 Aligned_cols=227 Identities=10% Similarity=0.105 Sum_probs=185.8
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeE
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTV 269 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~ 269 (485)
+...+.+|+|+ |||++||+|+.| .++|||+.++++++......+..+++++ +..++++++ .|++|+|||+++|++
T Consensus 18 h~~~V~~v~fs-~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 18 VSNPVTDYEFN-QDQSCLILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTG--VKEVVHIWDDVKKQD 93 (355)
T ss_dssp -CCCCCEEEEC-TTSSEEEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECS--STTEEEEEETTTTEE
T ss_pred CCCceEEEEEC-CCCCEEEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEEC--CccEEEEEECCCCcE
Confidence 44567799998 799999998866 5899999999888777655678888886 444444433 447999999999999
Q ss_pred EEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCC-eeEEecccCCCceEEEEEcCCCcEEEE--Ee-CCcEEE
Q 011452 270 LKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNF-ELTEVSRTEFMTPSAFIFLYENQLFLT--FR-NRTVAV 345 (485)
Q Consensus 270 L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg-~~~~~l~gh~~~v~avaFspdg~llaS--~s-D~TIkl 345 (485)
+.++.+ ...+..|+|.+ +.++++ .|++|+|||+.++ +++..+.+ ....++|+| ++++. ++ |++|+|
T Consensus 94 ~~~~~~-~~~v~~v~~~~---~~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 94 VSRIKV-DAPVKDLFLSR---EFIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEEEEC-SSCEEEEEECS---SEEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred EEEEEC-CCceEEEEEcC---CEEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 999984 46888999852 344444 5889999999998 77777655 445567788 55555 46 999999
Q ss_pred EeCC-Cc----------------EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCe-EEEEeCCC
Q 011452 346 WNFR-GE----------------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGS-INISNILT 407 (485)
Q Consensus 346 Wd~~-G~----------------ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dgt-IklWdl~T 407 (485)
||++ ++ ++.++.+|... |++|+|+|||++|||++. |++ |+|||+.+
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~-----v~~~~~s~~g~~l~s~s~-----------d~~~v~iwd~~~ 227 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP-----IKMVRLNRKSDMVATCSQ-----------DGTIIRVFKTED 227 (355)
T ss_dssp EECCC------------------CCEEECCCSSC-----EEEEEECTTSSEEEEEET-----------TCSEEEEEETTT
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCc-----eEEEEECCCCCEEEEEeC-----------CCCEEEEEECCC
Confidence 9996 54 27899999987 999999999999999997 799 99999999
Q ss_pred CeEEEEec-C-CCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 408 GKCLAKIR-A-SNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 408 Gk~l~tl~-g-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
|+++.++. + |.. .|++|+|+|||+.|+||+.|++|+|||+
T Consensus 228 ~~~~~~~~~g~h~~--------------------------------------~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 228 GVLVREFRRGLDRA--------------------------------------DVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp CCEEEEEECTTCCS--------------------------------------CEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred CcEEEEEEcCCCCC--------------------------------------cEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 99999998 5 762 8999999999999999999999999984
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.5e-34 Score=290.38 Aligned_cols=239 Identities=14% Similarity=0.163 Sum_probs=203.4
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC----------CeEEEEEc--CCcEEEEEEcCCce-EEEEEcCCCCe
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----------YTMLYSIS--DKNVQEIKISPGIM-LLIFTKASGHV 257 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~----------g~~l~tl~--~~~V~~VafSpg~~-ll~sss~~~D~ 257 (485)
+...+..++|++.++.+||+++.|++|+|||+.+ ++.+.++. ...|.+|+|+|++. ++++++ .|+
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~--~dg 204 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS--DDH 204 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC--TTS
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe--CCC
Confidence 4566779999843488999999999999999986 56666664 56899999998654 555543 458
Q ss_pred eEEEEecCCCeE-------EEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCC---eeEEecccCCCceEEEE
Q 011452 258 PLKILSIEDGTV-------LKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNF---ELTEVSRTEFMTPSAFI 327 (485)
Q Consensus 258 tIklWdi~tG~~-------L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg---~~~~~l~gh~~~v~ava 327 (485)
+|+|||+.++.. ...+.+|...+..|+|++.++..+++++.|++|+|||++++ +++..+.+|...|++++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 999999988432 46777898999999998545677778899999999999987 57778889999999999
Q ss_pred EcCCCc-EEEEEe-CCcEEEEeCC--CcEEEEeecCCCCCCCCCeeEEEECCCCC-EEEEEecCCCCCCCCcCCCCeEEE
Q 011452 328 FLYENQ-LFLTFR-NRTVAVWNFR--GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNAGSINI 402 (485)
Q Consensus 328 Fspdg~-llaS~s-D~TIklWd~~--G~ll~tl~gH~~~~~~~~v~svafSpDG~-~LaS~s~d~~~d~~~~~~DgtIkl 402 (485)
|+|+++ +|++++ |++|+|||++ ++++.++.+|... |.+|+|+|+|+ +|+|++. |++|+|
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~-----v~~i~~sp~~~~~l~s~~~-----------d~~i~i 348 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE-----IFQVQWSPHNETILASSGT-----------DRRLHV 348 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC-----EEEEEECSSCTTEEEEEET-----------TSCCEE
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC-----EEEEEECCCCCCEEEEEeC-----------CCcEEE
Confidence 999998 788999 9999999995 6789999999887 99999999995 6899886 799999
Q ss_pred EeCCC--------------CeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCC
Q 011452 403 SNILT--------------GKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDR 468 (485)
Q Consensus 403 Wdl~T--------------Gk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg 468 (485)
||+.+ .+++..+.+|.+ .|++++|+|++
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--------------------------------------~v~~~~~~p~~ 390 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTA--------------------------------------KISDFSWNPNE 390 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEECCCCSS--------------------------------------CEEEEEECSSS
T ss_pred EeCCCCccccCccccccCCcceEEEcCCCCC--------------------------------------CceEEEECCCC
Confidence 99987 478888888872 89999999999
Q ss_pred C-EEEEecCCCcEEEccC
Q 011452 469 N-EIYTGNRHGLVHVWSN 485 (485)
Q Consensus 469 ~-~LaSgs~DgtVklWd~ 485 (485)
+ .|+|++.||+|+||+.
T Consensus 391 ~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 391 PWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp TTEEEEEETTSEEEEEEE
T ss_pred CCEEEEEECCCCEEEeEc
Confidence 9 9999999999999973
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.1e-34 Score=290.83 Aligned_cols=239 Identities=8% Similarity=0.002 Sum_probs=168.4
Q ss_pred ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee--ccccCceEEEEeC-------CCCeE
Q 011452 137 EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES--ESLKWPGFVEFDD-------VNGKV 207 (485)
Q Consensus 137 ~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~--~~~~~~~~V~Fs~-------pnG~~ 207 (485)
..+...++++++..||++| .| ++++||++..++.... ..+.. +|..++..|+|+| .||++
T Consensus 90 ~~~~~~~~~~~~~~las~~----~d------~~v~lw~~~~~~~~~~-~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~ 158 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVC----QD------NTVRLIITKNETIITQ-HVLGGKSGHHNFVNDIDIADVYSADNRLAEQV 158 (393)
T ss_dssp -------CCEEEEEEEEEE----TT------SCEEEEEEETTEEEEE-EEECTTTSCSSCEEEEEEEEEECTTCSEEEEE
T ss_pred CCcceeecCCCCCEEEEEe----CC------CcEEEEECCCCcccee-eeecccCCCCCceEEEEEccccccccCCCCCE
Confidence 3445566677888898877 44 6999999988865321 12211 4667888999983 28999
Q ss_pred EEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCc-eEEEEEcCCCCeeEEEEecCCCeEEEEe-----------
Q 011452 208 LTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGI-MLLIFTKASGHVPLKILSIEDGTVLKSF----------- 273 (485)
Q Consensus 208 Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~-~ll~sss~~~D~tIklWdi~tG~~L~tl----------- 273 (485)
|||+|.|+||||||+.++.++..+. ...|.+|+|+|++ .++++++ .|++|+|||+.+++...++
T Consensus 159 las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~--~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE--RNGNIRIFDWTLNLSAEENSQTELVKNPWL 236 (393)
T ss_dssp EEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE--TTSEEEEEETTCCC----------CSCCCS
T ss_pred EEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC--CCCEEEEEECCCCcccccccccCCcccceE
Confidence 9999999999999999888766553 5689999999854 4555544 4589999999999876543
Q ss_pred --------------ecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcC---------
Q 011452 274 --------------NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLY--------- 330 (485)
Q Consensus 274 --------------~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFsp--------- 330 (485)
.+|...+..|.|.++++.+|++++.|++++|||+.+++....+.+|...+..+.|+|
T Consensus 237 ~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 237 LTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp EEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSC
T ss_pred EecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccC
Confidence 356667789999988999999999999999999999998888888877777776665
Q ss_pred -----------CCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCC
Q 011452 331 -----------ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNA 397 (485)
Q Consensus 331 -----------dg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~D 397 (485)
++.++++++ |++|+|||++ |+++..+.+|..+ |++|+|||||++||+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~-----V~svafspdG~~LA~as~------------ 379 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP-----IVDFCWHQDGSHLAIATE------------ 379 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC-----EEEEEECTTSSEEEEEES------------
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc-----EEEEEEcCCCCEEEEEeC------------
Confidence 344678888 9999999996 9999999999877 999999999999999984
Q ss_pred CeEEEEeC
Q 011452 398 GSINISNI 405 (485)
Q Consensus 398 gtIklWdl 405 (485)
+.|.||.+
T Consensus 380 ~Gv~lvrL 387 (393)
T 4gq1_A 380 GSVLLTRL 387 (393)
T ss_dssp SEEEEEEE
T ss_pred CCeEEEEE
Confidence 56777764
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=289.67 Aligned_cols=255 Identities=9% Similarity=0.081 Sum_probs=202.0
Q ss_pred eEEEEeCCCCeEEEEeeCCCcEEEeecCCCe---EEEEEcCC--------------------------------------
Q 011452 196 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSISDK-------------------------------------- 234 (485)
Q Consensus 196 ~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~---~l~tl~~~-------------------------------------- 234 (485)
..|+|+ +||++|+.+ .++.|+|||+.+|+ .+.++..+
T Consensus 8 ~~v~~s-~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (450)
T 2vdu_B 8 QNLLTS-RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIK 85 (450)
T ss_dssp CEEEEC-SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------
T ss_pred EEEEec-CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccc
Confidence 478998 799977766 48899999999999 66665421
Q ss_pred ------------------cEEEEEEcCCceEE-EEEcCCCCeeEEEEecC--CCeEEEEee--cCCcceeEEEEEecCCC
Q 011452 235 ------------------NVQEIKISPGIMLL-IFTKASGHVPLKILSIE--DGTVLKSFN--HLLHRNKKVDFIEQFNE 291 (485)
Q Consensus 235 ------------------~V~~VafSpg~~ll-~sss~~~D~tIklWdi~--tG~~L~tl~--~~~~~~~~V~f~~~~~~ 291 (485)
.|.+++|||++.++ ++++ .|++|+|||+. +|++++.+. .|...+..|+|+ |++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~ 162 (450)
T 2vdu_B 86 RTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD--SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA-EDDT 162 (450)
T ss_dssp --------------CCCCCEEEEEECTTSSEEEEEEG--GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC-TTSS
T ss_pred ccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC--CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc-CCCC
Confidence 59999999977664 5544 45899999999 999999997 455778899997 7788
Q ss_pred EEEEEeCCCcEEEEECCCCeeEE----ecccCCCceEEEEEcCC---CcEEEEEe-CCcEEEEeCC-CcEEEE-eecCCC
Q 011452 292 KLLVKQENENLQILDVRNFELTE----VSRTEFMTPSAFIFLYE---NQLFLTFR-NRTVAVWNFR-GELVTS-FEDHLL 361 (485)
Q Consensus 292 ~lls~s~D~tIkIWDv~tg~~~~----~l~gh~~~v~avaFspd---g~llaS~s-D~TIklWd~~-G~ll~t-l~gH~~ 361 (485)
.|++++.|++|++||+.+++... .+.+|...|.+++|+|+ +++|++++ |++|+|||++ ++++.+ +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999999988655 88899999999999999 99999999 9999999996 888887 669988
Q ss_pred CCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccc
Q 011452 362 WHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKK 441 (485)
Q Consensus 362 ~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~ 441 (485)
+ |.+++|+ ||++|+|++. |++|+|||+.+|+++.++..|.... ..|....
T Consensus 243 ~-----v~~~~~s-d~~~l~s~~~-----------d~~v~vwd~~~~~~~~~~~~~~~~~-------------~~~~~~~ 292 (450)
T 2vdu_B 243 F-----VSSICCG-KDYLLLSAGG-----------DDKIFAWDWKTGKNLSTFDYNSLIK-------------PYLNDQH 292 (450)
T ss_dssp C-----EEEEEEC-STTEEEEEES-----------SSEEEEEETTTCCEEEEEECHHHHG-------------GGCCTTS
T ss_pred c-----eEEEEEC-CCCEEEEEeC-----------CCeEEEEECCCCcEeeeecchhhhh-------------hhhhhcc
Confidence 7 9999999 9999999997 7999999999999999997653100 0000000
Q ss_pred cccccccccchhcccCCeEEEEEcCCCCEEEEec-CCCcEEEccC
Q 011452 442 HSHASRIRSTVAEALEDITALFYDEDRNEIYTGN-RHGLVHVWSN 485 (485)
Q Consensus 442 ~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs-~DgtVklWd~ 485 (485)
+................|.+|+|+||++.|++++ .|++|+||++
T Consensus 293 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 293 LAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp BC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred cccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 0000000000001113799999999999999999 9999999983
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=311.78 Aligned_cols=237 Identities=14% Similarity=0.175 Sum_probs=201.9
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecC--CCeEEEEEcC--CcEEEEEEcCC--ceEEEEEcCCCCeeEEEEec
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSISD--KNVQEIKISPG--IMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~--~g~~l~tl~~--~~V~~VafSpg--~~ll~sss~~~D~tIklWdi 264 (485)
|...+..++|+ |+|++|++|+.|++|+|||+. +++++.++.+ ..|.+|+|+|+ +.++++++ .|++|++||+
T Consensus 8 H~~~V~~l~~s-~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s--~Dg~I~vwd~ 84 (753)
T 3jro_A 8 HNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDGKVLIWKE 84 (753)
T ss_dssp CCCCEEEECCC-SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE--TTSCEEEEEE
T ss_pred CcceeEEEEEC-CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe--CCCeEEEEEC
Confidence 56677899998 799999999999999999998 4567777764 58999999964 55555544 3589999999
Q ss_pred CCCe--EEEEeecCCcceeEEEEEecC--CCEEEEEeCCCcEEEEECCCCe--eEEecccCCCceEEEEEcC--------
Q 011452 265 EDGT--VLKSFNHLLHRNKKVDFIEQF--NEKLLVKQENENLQILDVRNFE--LTEVSRTEFMTPSAFIFLY-------- 330 (485)
Q Consensus 265 ~tG~--~L~tl~~~~~~~~~V~f~~~~--~~~lls~s~D~tIkIWDv~tg~--~~~~l~gh~~~v~avaFsp-------- 330 (485)
.+|+ .+..+.+|...+..|+|+ |+ +..+++++.|++|+|||++++. ....+.+|...|.+++|+|
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~s-p~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWA-PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEEC-CGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCcccccccccCCCCCeEEEEEC-CCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 9998 788899999999999997 55 7889999999999999999883 4556678999999999999
Q ss_pred -----CCcEEEEEe-CCcEEEEeCC-C----cEEEEeecCCCCCCCCCeeEEEECCC---CCEEEEEecCCCCCCCCcCC
Q 011452 331 -----ENQLFLTFR-NRTVAVWNFR-G----ELVTSFEDHLLWHPDCNTNNIYITSD---QDLIISYCKADSDDPLAEGN 396 (485)
Q Consensus 331 -----dg~llaS~s-D~TIklWd~~-G----~ll~tl~gH~~~~~~~~v~svafSpD---G~~LaS~s~d~~~d~~~~~~ 396 (485)
++++|++++ |++|++||++ + +++.++.+|... |.+++|+|+ |++|+|++.
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~-----V~~l~~sp~~~~~~~l~s~s~----------- 227 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYLASVSQ----------- 227 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEES-----------
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc-----EEEEEeccCCCCCCEEEEEec-----------
Confidence 699999999 9999999995 5 678899999987 999999999 999999997
Q ss_pred CCeEEEEeCCCCe-----EEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEE
Q 011452 397 AGSINISNILTGK-----CLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEI 471 (485)
Q Consensus 397 DgtIklWdl~TGk-----~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~L 471 (485)
||+|+|||+.+++ .+....+|. ..|++++|+|||+.|
T Consensus 228 Dg~I~iwd~~~~~~~~~~~~~~~~~~~--------------------------------------~~v~~l~~spdg~~l 269 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWKKTLLKEEKFP--------------------------------------DVLWRASWSLSGNVL 269 (753)
T ss_dssp SSCEEEEEESSSSSCCBCCBSSSSCCS--------------------------------------SCCCCEEECTTTCCE
T ss_pred CCEEEEecCCCCCCcceeEEeccCCCC--------------------------------------CceEEEEEcCCCCEE
Confidence 7999999998864 222222232 389999999999999
Q ss_pred EEecCCCcEEEccC
Q 011452 472 YTGNRHGLVHVWSN 485 (485)
Q Consensus 472 aSgs~DgtVklWd~ 485 (485)
++|+.||+|+||+.
T Consensus 270 ~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 270 ALSGGDNKVTLWKE 283 (753)
T ss_dssp EEECSSSCEECCBC
T ss_pred EEEcCCCEEEEEec
Confidence 99999999999984
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=6.7e-32 Score=270.76 Aligned_cols=276 Identities=10% Similarity=0.076 Sum_probs=221.5
Q ss_pred ceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEee----cCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEE
Q 011452 97 KIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLN----VTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (485)
Q Consensus 97 ~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~----g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~ 170 (485)
.+..++|+ +.++++++.|+++++||..+|+.+..+. .+|...|++++|+|+|+.+++++. + +++
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~----d------~~v 193 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ----A------NAV 193 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG----G------TEE
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC----C------CEE
Confidence 34466666 7788888899999999999999987432 137778999999999999988663 3 589
Q ss_pred EEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEE-EEeeCCCcEEEeecCCCeEEEEEcC-CcEEEEEEcCCc-eE
Q 011452 171 RIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSISD-KNVQEIKISPGI-ML 247 (485)
Q Consensus 171 ~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~L-as~s~D~tiKlWdl~~g~~l~tl~~-~~V~~VafSpg~-~l 247 (485)
++|++.++++.. .+. .+...+..++|+ |+|+.| ++++.|++|++||+.+++++..+.. ..+..++|+|++ .+
T Consensus 194 ~~~d~~~~~~~~---~~~-~~~~~~~~~~~~-~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l 268 (433)
T 3bws_A 194 HVFDLKTLAYKA---TVD-LTGKWSKILLYD-PIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKEL 268 (433)
T ss_dssp EEEETTTCCEEE---EEE-CSSSSEEEEEEE-TTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEE
T ss_pred EEEECCCceEEE---EEc-CCCCCeeEEEEc-CCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEE
Confidence 999998887622 222 234567789998 688776 5666899999999999999888864 579999999866 44
Q ss_pred EEEEcCC-----CCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEecccCCC
Q 011452 248 LIFTKAS-----GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRTEFM 321 (485)
Q Consensus 248 l~sss~~-----~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~ 321 (485)
++++... .|++|++||+.+|+++..+. |...+..++|+ |++..++++ +.|++|++||+++++++..+. |..
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~-~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~ 345 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSG-NTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFD 345 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEEC-SSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSS
T ss_pred EEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEEC-CCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCC
Confidence 4443221 36899999999999988874 33567789996 677777665 799999999999999988885 667
Q ss_pred ceEEEEEcCCCcEEEEEe-C---------------CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEe
Q 011452 322 TPSAFIFLYENQLFLTFR-N---------------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 384 (485)
Q Consensus 322 ~v~avaFspdg~llaS~s-D---------------~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s 384 (485)
.+.+++|+|||++|++++ + ++|.+||.. ++++.++.++. . +.+++|+|||++|++++
T Consensus 346 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~-~-----~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 346 KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN-Q-----PTGLDVSPDNRYLVISD 419 (433)
T ss_dssp SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS-S-----EEEEEECTTSCEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC-C-----CceEEEcCCCCEEEEEE
Confidence 899999999999888776 3 599999995 99999998753 3 89999999999999887
Q ss_pred cCCCCCCCCcCCCCeEEEEeCC
Q 011452 385 KADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 385 ~d~~~d~~~~~~DgtIklWdl~ 406 (485)
. .|++|++|++.
T Consensus 420 ~----------~d~~i~v~~~~ 431 (433)
T 3bws_A 420 F----------LDHQIRVYRRD 431 (433)
T ss_dssp T----------TTTEEEEEEET
T ss_pred C----------CCCeEEEEEec
Confidence 4 27999999975
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.2e-32 Score=283.18 Aligned_cols=238 Identities=10% Similarity=0.027 Sum_probs=184.8
Q ss_pred ccccccccCCCCccccccccc----------ccccceEEEEEe------cCEEEEEeCCCeEEeeecccCcEEEEeecCC
Q 011452 72 LQEEYDTHDPKGHCSMVLPFL----------RKRSKIIEIVAA------RDIVFALAQSGVCAAFCRETNQRICFLNVTA 135 (485)
Q Consensus 72 l~~~~~~~~~~~~~~~~~~~~----------~~~s~V~~i~~s------~~~ias~s~dgtiklW~~~tG~~l~tl~g~~ 135 (485)
+-..+.-|..|+...++.|+- .+...|..|+++ ++++++++++ +++|++.+|+++++.-.+|
T Consensus 78 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~ 155 (356)
T 2w18_A 78 KLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLS 155 (356)
T ss_dssp EEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSST
T ss_pred eeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCC
Confidence 445667777788887777721 256679999999 4688888854 8889999999999854449
Q ss_pred cccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCC--CCeEEEEeeC
Q 011452 136 DEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDV--NGKVLTYSAQ 213 (485)
Q Consensus 136 ~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~p--nG~~Las~s~ 213 (485)
+..|+.++|+|+|+.+++- .+ +. ..+..++|++. +|.+|||+|.
T Consensus 156 d~~V~~~~~s~dG~~~~s~----------------------~~--------~~----~~v~~l~fs~~~g~~~~LaSgS~ 201 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQ----------------------FL--------MP----PEETILTFAEVQGMQEALLGTTI 201 (356)
T ss_dssp TCEEEEEEECTTSCEEEEE----------------------EE--------CC----CSSCEEEEEEEETSTTEEEEEET
T ss_pred CCcEEEEEECCCCceeeee----------------------cc--------CC----CceeeEEeeccCCCCceEEEecC
Confidence 9999999999999977540 01 11 23346777732 7799999999
Q ss_pred CCcEEEeecCCCeEEEEEcCC-----cEEEEEEcCCceEEEE----------EcCCCCeeEEEEecCCCeEEEEee----
Q 011452 214 DSIYKVFDLKNYTMLYSISDK-----NVQEIKISPGIMLLIF----------TKASGHVPLKILSIEDGTVLKSFN---- 274 (485)
Q Consensus 214 D~tiKlWdl~~g~~l~tl~~~-----~V~~VafSpg~~ll~s----------ss~~~D~tIklWdi~tG~~L~tl~---- 274 (485)
|+||||||+++|+++++++++ .|..++|||++.++++ ++++.|++||+||..+|+++.++.
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p 281 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLP 281 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeecc
Confidence 999999999999999999742 5778899998777643 234678999999999999998873
Q ss_pred -cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceE-EEEEcCCCcEEEEEe-CCcEEEEeC
Q 011452 275 -HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPS-AFIFLYENQLFLTFR-NRTVAVWNF 348 (485)
Q Consensus 275 -~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~-avaFspdg~llaS~s-D~TIklWd~ 348 (485)
+|.....+.++. +..+++++.|+||||||+++|++++++.+|...+. .++|||||++|+|++ |+||||||+
T Consensus 282 ~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 282 PGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCcceeEccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 554444444443 56777889999999999999999999999988766 589999999999999 999999995
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=2.3e-31 Score=273.35 Aligned_cols=281 Identities=11% Similarity=0.099 Sum_probs=218.6
Q ss_pred CEEEEEe----CCC----eEEeeec--ccCcEE--EEeecCCcccEEEEEEee--------------CCCEEEEEEeecC
Q 011452 106 DIVFALA----QSG----VCAAFCR--ETNQRI--CFLNVTADEVIRSLFYNK--------------NNDSLITVSVYAS 159 (485)
Q Consensus 106 ~~ias~s----~dg----tiklW~~--~tG~~l--~tl~g~~~~~i~sv~~sp--------------dg~~Las~S~d~~ 159 (485)
+.+++++ .|| +++|||. .+|+++ .++.+ |...++.+++++ ++..|+.++.+..
T Consensus 76 ~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~ 154 (415)
T 2hqs_A 76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKV-NKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNG 154 (415)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEE-CGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSS
T ss_pred CEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEc-ChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCC
Confidence 5666665 567 9999999 999988 45777 777899998886 3778888886533
Q ss_pred CCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCC---cEEEeecCCCeEEEEE-cCCc
Q 011452 160 DNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS---IYKVFDLKNYTMLYSI-SDKN 235 (485)
Q Consensus 160 ~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~---tiKlWdl~~g~~l~tl-~~~~ 235 (485)
++ ...++++||+..+++ ..+.. +...+..++|+ |||+.||+++.|+ +|++||+.++++.... +...
T Consensus 155 ~~----~~~~i~i~d~~g~~~---~~l~~--~~~~v~~~~~S-pdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~ 224 (415)
T 2hqs_A 155 GQ----FPYELRVSDYDGYNQ---FVVHR--SPQPLMSPAWS-PDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH 224 (415)
T ss_dssp SS----CCEEEEEEETTSCSC---EEEEE--ESSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSC
T ss_pred CC----ccceEEEEcCCCCCC---EEEeC--CCCcceeeEEc-CCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCc
Confidence 31 015899999753333 22333 34567789998 8999999999885 9999999999876433 3457
Q ss_pred EEEEEEcCCce-EEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeC-CC--cEEEEECCCCe
Q 011452 236 VQEIKISPGIM-LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQE-NE--NLQILDVRNFE 311 (485)
Q Consensus 236 V~~VafSpg~~-ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~-D~--tIkIWDv~tg~ 311 (485)
+.+++|||++. ++.+++.+.+..|++||+++|++ ..+..|...+..++|+ |++..|++++. ++ .|.+||+.+++
T Consensus 225 ~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s-pdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWF-PDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEEC-CCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 99999999776 55465555567899999999887 6777777888999996 78888988875 55 67777999888
Q ss_pred eEEecccCCCceEEEEEcCCCcEEEEEe-C---CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecC
Q 011452 312 LTEVSRTEFMTPSAFIFLYENQLFLTFR-N---RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 386 (485)
Q Consensus 312 ~~~~l~gh~~~v~avaFspdg~llaS~s-D---~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d 386 (485)
+.. +..|...+.+++|+|||++|++++ + .+|.+||++ |++ ..+..|. . +.+++|+|||++|++++.+
T Consensus 303 ~~~-l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~-----~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 303 PQR-ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-L-----DETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp CEE-CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-S-----CEEEEECTTSSEEEEEEEE
T ss_pred EEE-EecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-C-----cCCeEEcCCCCEEEEEEcC
Confidence 644 456777899999999999999887 5 489999997 665 5677764 4 8999999999999999872
Q ss_pred CCCCCCCcCCCC--eEEEEeCCCCeEEEEecCCC
Q 011452 387 DSDDPLAEGNAG--SINISNILTGKCLAKIRASN 418 (485)
Q Consensus 387 ~~~d~~~~~~Dg--tIklWdl~TGk~l~tl~gH~ 418 (485)
++ .|.+||+. |+++..|.+|.
T Consensus 375 ----------~~~~~l~~~d~~-g~~~~~l~~~~ 397 (415)
T 2hqs_A 375 ----------GMGSVLNLVSTD-GRFKARLPATD 397 (415)
T ss_dssp ----------TTEEEEEEEETT-SCCEEECCCSS
T ss_pred ----------CCccEEEEEECC-CCcEEEeeCCC
Confidence 22 89999986 78889999987
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-33 Score=307.29 Aligned_cols=248 Identities=9% Similarity=0.057 Sum_probs=199.3
Q ss_pred EeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC--CeE
Q 011452 130 FLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN--GKV 207 (485)
Q Consensus 130 tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn--G~~ 207 (485)
++.+ |.+.|++++|+|+|+.||+++. | ++++||++..+.... ...+. .|...+.+|+|+ |+ |++
T Consensus 4 ~l~g-H~~~V~~l~~s~dg~~latg~~----d------g~I~vwd~~~~~~~~-~~~l~-~h~~~V~~l~~s-~~~~~~~ 69 (753)
T 3jro_A 4 IANA-HNELIHDAVLDYYGKRLATCSS----D------KTIKIFEVEGETHKL-IDTLT-GHEGPVWRVDWA-HPKFGTI 69 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEET----T------TEEEEEEEETTEEEE-EEEEC-CCSSCEEEEEEC-CTTSCSE
T ss_pred eccc-CcceeEEEEECCCCCeEEEEEC----C------CcEEEEecCCCCCcc-ceecc-CCcCceEEEEec-CCCCCCE
Confidence 4555 8899999999999999999774 4 599999987433211 11222 345667789997 45 999
Q ss_pred EEEeeCCCcEEEeecCCCe--EEEEEc--CCcEEEEEEcCC--ceEEEEEcCCCCeeEEEEecCCCe--EEEEeecCCcc
Q 011452 208 LTYSAQDSIYKVFDLKNYT--MLYSIS--DKNVQEIKISPG--IMLLIFTKASGHVPLKILSIEDGT--VLKSFNHLLHR 279 (485)
Q Consensus 208 Las~s~D~tiKlWdl~~g~--~l~tl~--~~~V~~VafSpg--~~ll~sss~~~D~tIklWdi~tG~--~L~tl~~~~~~ 279 (485)
|++|+.|++|+|||+.+++ .+..+. ...|.+++|+|+ +.++++++ .|++|++||+.++. ....+.+|...
T Consensus 70 l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 70 LASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred EEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe--CCCcEEEEEeecCCCcceeEeecCCCc
Confidence 9999999999999999987 566664 468999999986 65555554 45899999999883 44567788899
Q ss_pred eeEEEEEec------------CCCEEEEEeCCCcEEEEECCCC----eeEEecccCCCceEEEEEcCC---CcEEEEEe-
Q 011452 280 NKKVDFIEQ------------FNEKLLVKQENENLQILDVRNF----ELTEVSRTEFMTPSAFIFLYE---NQLFLTFR- 339 (485)
Q Consensus 280 ~~~V~f~~~------------~~~~lls~s~D~tIkIWDv~tg----~~~~~l~gh~~~v~avaFspd---g~llaS~s- 339 (485)
+..++|++. ++..+++++.|++|+|||++++ .+...+.+|...|.+++|+|+ +++|+|++
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 999999753 5788999999999999999987 677888999999999999999 99999999
Q ss_pred CCcEEEEeCC-Cc-----EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe
Q 011452 340 NRTVAVWNFR-GE-----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK 409 (485)
Q Consensus 340 D~TIklWd~~-G~-----ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk 409 (485)
|++|++||++ ++ .+....+|... |.+++|+|||++|++++. ||+|+|||+.++.
T Consensus 228 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-----v~~l~~spdg~~l~s~s~-----------Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGG-----------DNKVTLWKENLEG 287 (753)
T ss_dssp SSCEEEEEESSSSSCCBCCBSSSSCCSSC-----CCCEEECTTTCCEEEECS-----------SSCEECCBCCSSS
T ss_pred CCEEEEecCCCCCCcceeEEeccCCCCCc-----eEEEEEcCCCCEEEEEcC-----------CCEEEEEecCCCC
Confidence 9999999996 53 33334456555 899999999999999986 7999999998654
No 128
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=6e-32 Score=291.68 Aligned_cols=315 Identities=8% Similarity=0.063 Sum_probs=239.4
Q ss_pred ccceEEEEEe--cCEEEEEeC-CC-----eEEeeecccCcEEEEeecCCc-----------------------ccEEEEE
Q 011452 95 RSKIIEIVAA--RDIVFALAQ-SG-----VCAAFCRETNQRICFLNVTAD-----------------------EVIRSLF 143 (485)
Q Consensus 95 ~s~V~~i~~s--~~~ias~s~-dg-----tiklW~~~tG~~l~tl~g~~~-----------------------~~i~sv~ 143 (485)
...|.+++|+ |++||+++. |+ ++++||+++|+....+..... ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 3456677777 999999998 88 999999999998776654211 2388999
Q ss_pred EeeCCCEEEEEEeecCCCCcccceeEEEEeEeccC---CcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEe
Q 011452 144 YNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRG---KPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVF 220 (485)
Q Consensus 144 ~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G---~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlW 220 (485)
|||||+.|++++. .++.+|++..| ++. .+.. +...+..++|| |||+.||+++ +++|++|
T Consensus 116 ~SpDg~~l~~~~~-----------~~i~~~d~~~~~~~~~~---~l~~--~~~~~~~~~~S-PDG~~la~~~-~~~i~~~ 177 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-----------GELYLYDLKQEGKAAVR---QLTH--GEGFATDAKLS-PKGGFVSFIR-GRNLWVI 177 (741)
T ss_dssp ECTTSSEEEEEET-----------TEEEEEESSSCSTTSCC---BCCC--SSSCEEEEEEC-TTSSEEEEEE-TTEEEEE
T ss_pred ECCCCCEEEEEeC-----------CcEEEEECCCCCcceEE---Eccc--CCcccccccCC-CCCCEEEEEe-CCcEEEE
Confidence 9999999998773 48999999887 541 2332 23456789998 8999999988 5699999
Q ss_pred ecCCCeEEEEEcC--Cc----------------EEEEEEcCCceEEEEEcCCC---------------------------
Q 011452 221 DLKNYTMLYSISD--KN----------------VQEIKISPGIMLLIFTKASG--------------------------- 255 (485)
Q Consensus 221 dl~~g~~l~tl~~--~~----------------V~~VafSpg~~ll~sss~~~--------------------------- 255 (485)
|+.+++....... .. +..++|||++..+++++.+.
T Consensus 178 d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 178 DLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp ETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred ecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 9999987654432 11 47899999776555543321
Q ss_pred ----CeeEEEEecCC-CeEEEEee--cCCcceeEEEEEecCCCEEEEEe-----CCCcEEEEECCCCeeEEecccCCC--
Q 011452 256 ----HVPLKILSIED-GTVLKSFN--HLLHRNKKVDFIEQFNEKLLVKQ-----ENENLQILDVRNFELTEVSRTEFM-- 321 (485)
Q Consensus 256 ----D~tIklWdi~t-G~~L~tl~--~~~~~~~~V~f~~~~~~~lls~s-----~D~tIkIWDv~tg~~~~~l~gh~~-- 321 (485)
...|.+||+.+ |++..... .|...+..++| |++..|++.+ .+.+|.+||+.++++..++.+|..
T Consensus 258 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW--RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp SCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE--EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe--CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 12889999999 98766543 36677889999 6788888764 468899999999999888876653
Q ss_pred --ceEEEEEcCCCcEEEEEe-CCcEEEEeC--CCcEEEEeecCCCCCCCCCeeEE-EECCCCCEEEEEecCCCCCCCCcC
Q 011452 322 --TPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNNI-YITSDQDLIISYCKADSDDPLAEG 395 (485)
Q Consensus 322 --~v~avaFspdg~llaS~s-D~TIklWd~--~G~ll~tl~gH~~~~~~~~v~sv-afSpDG~~LaS~s~d~~~d~~~~~ 395 (485)
.+..++|+|||+++++++ |++++||.+ +|+ +..|.+|... |.++ +|||||++|+..+.+
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~-----v~~~~~~s~dg~~l~~~~~~--------- 400 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWS-----VDELLAVDEKAGLAYFRAGI--------- 400 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSC-----EEEEEEEETTTTEEEEEECS---------
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceE-----EEeEeEEeCCCCEEEEEEeC---------
Confidence 346889999999999988 998888876 477 8899988655 7787 599999988655431
Q ss_pred CCC--eEEEEeCCC-CeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEE
Q 011452 396 NAG--SINISNILT-GKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIY 472 (485)
Q Consensus 396 ~Dg--tIklWdl~T-Gk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~La 472 (485)
++ +++||++.. |+++..|.+ . ..|.+++|||||+.|+
T Consensus 401 -~~~~~~~l~~~~~~g~~~~~l~~-~--------------------------------------~~~~~~~~spdg~~l~ 440 (741)
T 2ecf_A 401 -ESARESQIYAVPLQGGQPQRLSK-A--------------------------------------PGMHSASFARNASVYV 440 (741)
T ss_dssp -SCTTCBEEEEEETTCCCCEECCC-S--------------------------------------CSEEEEEECTTSSEEE
T ss_pred -CCCceEEEEEEEcCCCCeeeccc-C--------------------------------------CCceEEEECCCCCEEE
Confidence 34 899999864 777777765 2 1788999999999988
Q ss_pred EecCC----CcEEEcc
Q 011452 473 TGNRH----GLVHVWS 484 (485)
Q Consensus 473 Sgs~D----gtVklWd 484 (485)
....+ ..+.+|+
T Consensus 441 ~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 441 DSWSNNSTPPQIELFR 456 (741)
T ss_dssp EEEEETTEEEEEEEEE
T ss_pred EEecCCCCCCeEEEEE
Confidence 76543 3466664
No 129
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-31 Score=273.12 Aligned_cols=252 Identities=11% Similarity=0.083 Sum_probs=200.6
Q ss_pred cCcEEEEeecCCcccEEEEEEeeC-CCEEEEEEeecCCCCcccceeEEEEeEecc--------CCcCcccceeee-cccc
Q 011452 124 TNQRICFLNVTADEVIRSLFYNKN-NDSLITVSVYASDNFSSLRCRSTRIEYIRR--------GKPDAGFALFES-ESLK 193 (485)
Q Consensus 124 tG~~l~tl~g~~~~~i~sv~~spd-g~~Las~S~d~~~d~stL~~~t~~lw~i~~--------G~~~~~~~lf~~-~~~~ 193 (485)
+++........|...|.+++|+|+ ++.||+++ .+ ++++||++.. ++. .++... .+..
T Consensus 116 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~----~d------g~V~vwd~~~~~~~~~~~~~~---~~~~~~~~h~~ 182 (430)
T 2xyi_A 116 CGKIEIEIKINHEGEVNRARYMPQNACVIATKT----PS------SDVLVFDYTKHPSKPEPSGEC---QPDLRLRGHQK 182 (430)
T ss_dssp --CEEEEEEEEESSCCSEEEEETTEEEEEEEEC----SS------SCEEEEEGGGSCSSCCTTCCC---CCSEEEECCSS
T ss_pred CCceEEEEEEcCCCcEEEEEECCCCCcEEEEEC----CC------CcEEEEECCCcccccCccccC---CCcEEecCCCC
Confidence 344432333348889999999998 67787765 34 5899999965 222 112221 3445
Q ss_pred CceEEEEeCCCCe-EEEEeeCCCcEEEeecCCCeE-------EEEE--cCCcEEEEEEcC-CceEEEEEcCCCCeeEEEE
Q 011452 194 WPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTM-------LYSI--SDKNVQEIKISP-GIMLLIFTKASGHVPLKIL 262 (485)
Q Consensus 194 ~~~~V~Fs~pnG~-~Las~s~D~tiKlWdl~~g~~-------l~tl--~~~~V~~VafSp-g~~ll~sss~~~D~tIklW 262 (485)
.+..++|+ |+++ +|++++.|++|+|||+.++.. ...+ +...|.+|+|+| ++.++++++ .|++|++|
T Consensus 183 ~v~~l~~~-~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~--~dg~i~i~ 259 (430)
T 2xyi_A 183 EGYGLSWN-PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA--DDQKLMIW 259 (430)
T ss_dssp CCCCEEEC-TTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE--TTSEEEEE
T ss_pred CeEEEEeC-CCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe--CCCeEEEE
Confidence 56789998 6888 999999999999999987431 2334 345799999998 666666654 34899999
Q ss_pred ecCCC---eEEEEeecCCcceeEEEEEecCCC-EEEEEeCCCcEEEEECCC-CeeEEecccCCCceEEEEEcCCCc-EEE
Q 011452 263 SIEDG---TVLKSFNHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRN-FELTEVSRTEFMTPSAFIFLYENQ-LFL 336 (485)
Q Consensus 263 di~tG---~~L~tl~~~~~~~~~V~f~~~~~~-~lls~s~D~tIkIWDv~t-g~~~~~l~gh~~~v~avaFspdg~-lla 336 (485)
|+.++ +++.++..|...+..|+|+ |++. .+++++.|++|+|||+++ ++++..+.+|...|.+++|+|+++ +|+
T Consensus 260 d~~~~~~~~~~~~~~~~~~~v~~i~~~-p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 260 DTRNNNTSKPSHTVDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp ETTCSCSSSCSEEEECCSSCEEEEEEC-SSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred ECCCCCCCcceeEeecCCCCeEEEEeC-CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEE
Confidence 99988 6888898899999999997 5565 577789999999999998 677888999999999999999995 799
Q ss_pred EEe-CCcEEEEeCCC---------------cEEEEeecCCCCCCCCCeeEEEECCCCC-EEEEEecCCCCCCCCcCCCCe
Q 011452 337 TFR-NRTVAVWNFRG---------------ELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNAGS 399 (485)
Q Consensus 337 S~s-D~TIklWd~~G---------------~ll~tl~gH~~~~~~~~v~svafSpDG~-~LaS~s~d~~~d~~~~~~Dgt 399 (485)
+++ |++|+|||+.. +++..+.+|... |+.++|+|+++ +|+|++. ||+
T Consensus 339 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~p~~~~~l~s~s~-----------dg~ 402 (430)
T 2xyi_A 339 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK-----ISDFSWNPNEPWIICSVSE-----------DNI 402 (430)
T ss_dssp EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSC-----EEEEEECSSSTTEEEEEET-----------TSE
T ss_pred EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCC-----ceEEEECCCCCCEEEEEEC-----------CCC
Confidence 998 99999999953 789999999887 99999999999 9999986 799
Q ss_pred EEEEeCCCC
Q 011452 400 INISNILTG 408 (485)
Q Consensus 400 IklWdl~TG 408 (485)
|+||++.++
T Consensus 403 i~iw~~~~~ 411 (430)
T 2xyi_A 403 MQVWQMAEN 411 (430)
T ss_dssp EEEEEECHH
T ss_pred EEEeEcccc
Confidence 999998754
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=4.6e-30 Score=274.88 Aligned_cols=295 Identities=6% Similarity=-0.000 Sum_probs=230.4
Q ss_pred eEEEEEe--cCEEEEEeCCCeEEeeec--ccCcEEEEeecCCcccEEEEEEee----CCCEEEEEEeecCCCCcccceeE
Q 011452 98 IIEIVAA--RDIVFALAQSGVCAAFCR--ETNQRICFLNVTADEVIRSLFYNK----NNDSLITVSVYASDNFSSLRCRS 169 (485)
Q Consensus 98 V~~i~~s--~~~ias~s~dgtiklW~~--~tG~~l~tl~g~~~~~i~sv~~sp----dg~~Las~S~d~~~d~stL~~~t 169 (485)
+..++|+ |++|++++.|++|++||+ .+++++.++.. ....++|+||| ||++|++++.. + .+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~~~---~------~~ 249 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYW---P------PQ 249 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEE---S------SE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec--CCCcceEEeCCCcCCCCCEEEEEEcc---C------Ce
Confidence 7778888 999999999999999999 89999999875 33589999999 99999987742 2 58
Q ss_pred EEEeEeccCCcCcccceeeec-------cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEE--EEc-CCcEEEE
Q 011452 170 TRIEYIRRGKPDAGFALFESE-------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--SIS-DKNVQEI 239 (485)
Q Consensus 170 ~~lw~i~~G~~~~~~~lf~~~-------~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~--tl~-~~~V~~V 239 (485)
+.|||..++++.+...+-... .-.++..+.|++.++.++++...|++|.+||+.+++.+. ++. +..+..+
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~ 329 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDG 329 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCc
Confidence 999999888874322211100 012466899985466778888999999999998876443 443 5678899
Q ss_pred EEcCCce-EEEEEcCCCCeeEEEEecCCCeEEEEeec----CCcceeEEEEEecCCCEEEEE-e-CCCcEEEEECCC---
Q 011452 240 KISPGIM-LLIFTKASGHVPLKILSIEDGTVLKSFNH----LLHRNKKVDFIEQFNEKLLVK-Q-ENENLQILDVRN--- 309 (485)
Q Consensus 240 afSpg~~-ll~sss~~~D~tIklWdi~tG~~L~tl~~----~~~~~~~V~f~~~~~~~lls~-s-~D~tIkIWDv~t--- 309 (485)
+|+|++. +++++.. +.+|++||+++|++++++.. |.+ ..+.|..|+++.++++ + .|++|+|||+.+
T Consensus 330 ~~spdg~~l~va~~~--~~~v~v~D~~tg~l~~~i~~g~~ph~g--~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 330 GWDSSHRYFMTAANN--SNKVAVIDSKDRRLSALVDVGKTPHPG--RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp EECTTSCEEEEEEGG--GTEEEEEETTTTEEEEEEECSSSBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred eECCCCCEEEEEecC--CCeEEEEECCCCeEEEeeccCCCCCCC--CCcccCCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 9999776 4555443 47999999999999999984 332 2344544665666555 3 689999999999
Q ss_pred ----CeeEEecccCCCceEEEEEcCCCcEEEEEe--------CCcEEEEeCC-CcEE-EEe--------ecCCCCCCCCC
Q 011452 310 ----FELTEVSRTEFMTPSAFIFLYENQLFLTFR--------NRTVAVWNFR-GELV-TSF--------EDHLLWHPDCN 367 (485)
Q Consensus 310 ----g~~~~~l~gh~~~v~avaFspdg~llaS~s--------D~TIklWd~~-G~ll-~tl--------~gH~~~~~~~~ 367 (485)
.++++++.+|...+..++|+|||+.|.+++ +++|+|||++ ++++ ..| ..|...
T Consensus 406 ~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~----- 480 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKR----- 480 (543)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCE-----
T ss_pred chhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCc-----
Confidence 899999999999999999999999999986 5799999996 8876 554 344444
Q ss_pred eeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 368 TNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 368 v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
+..++|+|||+.|..+....+ +.|++|.|||.+|++|+++|+++.
T Consensus 481 ~~~~~~~~~g~~~~~s~~~~~------~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 481 VVQPEYNKRGDEVWFSVWNGK------NDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp EEEEEECSSSSEEEEEEECCT------TSCCEEEEEETTTTEEEEEECCTT
T ss_pred eEeccCCCCCCEEEEEeecCC------CCCCeEEEEECCCceEEEeecCCC
Confidence 899999999999998754111 237999999999999999998754
No 131
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=1.3e-30 Score=279.88 Aligned_cols=319 Identities=9% Similarity=-0.008 Sum_probs=225.1
Q ss_pred CCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcc---cEEEEEEeeCCCEEEEEEee
Q 011452 81 PKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADE---VIRSLFYNKNNDSLITVSVY 157 (485)
Q Consensus 81 ~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~---~i~sv~~spdg~~Las~S~d 157 (485)
.+.....++|+ |+++++ +.||++++||..+|++...+.+ |.. .|.+++|||||+.||+++.+
T Consensus 17 ~~~~~~~~spd-------------g~~~~~-~~dg~i~~~d~~~g~~~~~~~~-~~~~~~~v~~~~~SpDg~~l~~~~~~ 81 (723)
T 1xfd_A 17 IHDPEAKWISD-------------TEFIYR-EQKGTVRLWNVETNTSTVLIEG-KKIESLRAIRYEISPDREYALFSYNV 81 (723)
T ss_dssp CCCCCCCBSSS-------------SCBCCC-CSSSCEEEBCGGGCCCEEEECT-TTTTTTTCSEEEECTTSSEEEEEESC
T ss_pred ccccccEEcCC-------------CcEEEE-eCCCCEEEEECCCCcEEEEecc-ccccccccceEEECCCCCEEEEEecC
Confidence 34556666777 887766 8899999999999998877765 443 49999999999999998754
Q ss_pred cCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--C
Q 011452 158 ASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--K 234 (485)
Q Consensus 158 ~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~ 234 (485)
.... ..=...++.||++..|++ ..+-.. .+...+..++|| |||+.||+++. ++|++||+.++++...... .
T Consensus 82 ~~~~-~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~S-PdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~ 155 (723)
T 1xfd_A 82 EPIY-QHSYTGYYVLSKIPHGDP---QSLDPPEVSNAKLQYAGWG-PKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE 155 (723)
T ss_dssp CCCS-SSCCCSEEEEEESSSCCC---EECCCTTCCSCCCSBCCBC-SSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT
T ss_pred ccce-eecceeeEEEEECCCCce---EeccCCccccccccccEEC-CCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC
Confidence 3210 000125888999988876 112211 122235678998 89999999985 8999999999887655432 2
Q ss_pred cE------------------EEEEEcCCceEEEEEcCCC--------------------------------CeeEEEEec
Q 011452 235 NV------------------QEIKISPGIMLLIFTKASG--------------------------------HVPLKILSI 264 (485)
Q Consensus 235 ~V------------------~~VafSpg~~ll~sss~~~--------------------------------D~tIklWdi 264 (485)
.| .+++|||++..+++++.+. +.+|++||+
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~ 235 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL 235 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC
Confidence 23 7899999776555544221 348999999
Q ss_pred CCCeEEEEeecC------CcceeEEEEEecCCCEEEEEe----CCCcEEEEECCCCeeEEeccc-CCCceE----EEEEc
Q 011452 265 EDGTVLKSFNHL------LHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNFELTEVSRT-EFMTPS----AFIFL 329 (485)
Q Consensus 265 ~tG~~L~tl~~~------~~~~~~V~f~~~~~~~lls~s----~D~tIkIWDv~tg~~~~~l~g-h~~~v~----avaFs 329 (485)
.+|++...+..+ ...+..++|+ ||+..|++.+ .+.+|++||+.++++...+.. |..++. .++||
T Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 314 (723)
T 1xfd_A 236 NGPTHDLEMMPPDDPRMREYYITMVKWA-TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFS 314 (723)
T ss_dssp SSSCCCEECCCCCCGGGSSEEEEEEEES-SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEEC
T ss_pred CCCceeEEeeCCccCCCccceeEEEEEe-CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEc
Confidence 999987777754 5567899997 6676665553 347899999999998887644 444443 78999
Q ss_pred CCCcEEEEE--e-CC------cEEEEe-CCCcE---EEEeecCCCCCCCCCeeE-EEECCCCCEEEEEecCCCCCCCCcC
Q 011452 330 YENQLFLTF--R-NR------TVAVWN-FRGEL---VTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKADSDDPLAEG 395 (485)
Q Consensus 330 pdg~llaS~--s-D~------TIklWd-~~G~l---l~tl~gH~~~~~~~~v~s-vafSpDG~~LaS~s~d~~~d~~~~~ 395 (485)
|||+.|+.. . |+ .|.+|| ..+.. +..|..+... +.. ++|||||++|+..+.+
T Consensus 315 pdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-----~~~~~~~spdg~~l~~~~~~--------- 380 (723)
T 1xfd_A 315 KDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWD-----VTKILAYDEKGNKIYFLSTE--------- 380 (723)
T ss_dssp TTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSC-----EEEEEEEETTTTEEEEEESS---------
T ss_pred CCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeE-----EEeeeEEcCCCCEEEEEEcC---------
Confidence 999977753 3 77 577788 45443 6666643222 444 6999999999877651
Q ss_pred CC--CeEEEEeCCCC--eEEEEecC---CCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCC
Q 011452 396 NA--GSINISNILTG--KCLAKIRA---SNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDR 468 (485)
Q Consensus 396 ~D--gtIklWdl~TG--k~l~tl~g---H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg 468 (485)
+ ++++||++..+ .....|.+ |. ..|..++|||||
T Consensus 381 -~~~~~~~l~~~~~~~~~~~~~l~~~~~~~--------------------------------------~~~~~~~~spdg 421 (723)
T 1xfd_A 381 -DLPRRRQLYSANTVGNFNRQCLSCDLVEN--------------------------------------CTYFSASFSHSM 421 (723)
T ss_dssp -SCTTCCEEEEECSSTTCCCBCSSTTSSSS--------------------------------------CCCCEEEECTTS
T ss_pred -CCCcceEEEEEeCCCCCCcceecccccCC--------------------------------------CCeEEEEECCCC
Confidence 3 78999998643 23334433 22 267889999999
Q ss_pred CEEEEe
Q 011452 469 NEIYTG 474 (485)
Q Consensus 469 ~~LaSg 474 (485)
+.|+..
T Consensus 422 ~~l~~~ 427 (723)
T 1xfd_A 422 DFFLLK 427 (723)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 987754
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.97 E-value=5.4e-28 Score=234.26 Aligned_cols=274 Identities=8% Similarity=0.022 Sum_probs=215.0
Q ss_pred ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCe-EEEEeeCCC
Q 011452 137 EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGK-VLTYSAQDS 215 (485)
Q Consensus 137 ~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~-~Las~s~D~ 215 (485)
..+..++|+|+|+.|++++..+. ...+..++.+||..+|+... .+.. ...+..++|+ |+|+ +++++..++
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~---~~~~~~~v~~~d~~~~~~~~---~~~~--~~~~~~~~~s-~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSR---KLDKGGVVYRLDPVTLEVTQ---AIHN--DLKPFGATIN-NTTQTLWFGNTVNS 111 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCT---TTEESEEEEEECTTTCCEEE---EEEE--SSCCCSEEEE-TTTTEEEEEETTTT
T ss_pred cCccceEECCCCCEEEEEcCCCc---CCCCCccEEEEcCCCCeEEE---EEec--CCCcceEEEC-CCCCEEEEEecCCC
Confidence 35789999999999988775321 11112689999998888632 2322 2346689998 7887 566667789
Q ss_pred cEEEeecCCCeEEEEEcCC-----------cEEEEEEcCCce-EEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEE
Q 011452 216 IYKVFDLKNYTMLYSISDK-----------NVQEIKISPGIM-LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKV 283 (485)
Q Consensus 216 tiKlWdl~~g~~l~tl~~~-----------~V~~VafSpg~~-ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V 283 (485)
+|.+||+++++.+.++... .+.+++|||++. ++++. ...+..|.+||+++++.+..+..+......+
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISG-IGKESVIWVVDGGNIKLKTAIQNTGKMSTGL 190 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEE-ESSSCEEEEEETTTTEEEEEECCCCTTCCCC
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEe-cCCCceEEEEcCCCCceEEEecCCCCccceE
Confidence 9999999999988887532 278999998654 54443 2335799999999999999998555667889
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc----CCCceEEEEEcCCCcEEEEEe--CCcEEEEeCC-CcEEEEe
Q 011452 284 DFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT----EFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GELVTSF 356 (485)
Q Consensus 284 ~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g----h~~~v~avaFspdg~llaS~s--D~TIklWd~~-G~ll~tl 356 (485)
+|+ |++.+++++..|+.|.+||+.+++.+..+.. +...+..++|+|||+.|+.++ +++|.+||.. |+++..+
T Consensus 191 ~~s-~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 191 ALD-SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp EEE-TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred EEC-CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 997 7888999999999999999999998877653 566788999999999666555 6999999995 9999888
Q ss_pred ecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCC
Q 011452 357 EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGS 436 (485)
Q Consensus 357 ~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~ 436 (485)
..+. -..++|+|||++|+.++. .+++|.+||+.+++.+.++..+.
T Consensus 270 ~~~~-------~~~~~~s~dg~~l~v~~~----------~~~~v~~~d~~~~~~~~~~~~~~------------------ 314 (353)
T 3vgz_A 270 AAPE-------SLAVLFNPARNEAYVTHR----------QAGKVSVIDAKSYKVVKTFDTPT------------------ 314 (353)
T ss_dssp ECSS-------CCCEEEETTTTEEEEEET----------TTTEEEEEETTTTEEEEEEECCS------------------
T ss_pred EcCC-------CceEEECCCCCEEEEEEC----------CCCeEEEEECCCCeEEEEEecCC------------------
Confidence 7543 246999999997666553 27999999999999999987653
Q ss_pred ccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCC
Q 011452 437 CNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRH 477 (485)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~D 477 (485)
.+++++|+|||+.|+.++.+
T Consensus 315 ---------------------~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 315 ---------------------HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---------------------EEEEEEECTTSCEEEEEEEC
T ss_pred ---------------------CCCeEEEcCCCCEEEEEEcc
Confidence 67899999999988777665
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=3.7e-29 Score=284.21 Aligned_cols=233 Identities=12% Similarity=0.059 Sum_probs=187.9
Q ss_pred EEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCC-------------cEEEEEEc-CCceEEEEEcCCCCeeEEEE
Q 011452 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-------------NVQEIKIS-PGIMLLIFTKASGHVPLKIL 262 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~-------------~V~~VafS-pg~~ll~sss~~~D~tIklW 262 (485)
.++|+ |||+.||+++ |++|.+||+.+.++ ..+..+ .|.+++|| |++..+++.+ +..|.+|
T Consensus 249 ~~~~S-pDG~~la~~~-~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~---~~~i~~~ 322 (1045)
T 1k32_A 249 PRHLN-TDGRRILFSK-GGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS---RGQAFIQ 322 (1045)
T ss_dssp EEEEE-ESSSCEEEEE-TTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE---TTEEEEE
T ss_pred eeeEc-CCCCEEEEEe-CCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE---cCEEEEE
Confidence 56888 7999998875 89999999855443 366542 58899999 9776555544 3689999
Q ss_pred ecCCCeEEEEeecCCc-ceeEEEEEecCCCEEEEEeCCCcEE-EEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-
Q 011452 263 SIEDGTVLKSFNHLLH-RNKKVDFIEQFNEKLLVKQENENLQ-ILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR- 339 (485)
Q Consensus 263 di~tG~~L~tl~~~~~-~~~~V~f~~~~~~~lls~s~D~tIk-IWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s- 339 (485)
++.+|+... +..|.. .+..++|+ ++..|+..+++..|. +||+.++++.... +|...+.+++|||||++||+++
T Consensus 323 ~~~~~~~~~-~~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~ 398 (1045)
T 1k32_A 323 DVSGTYVLK-VPEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVAND 398 (1045)
T ss_dssp CTTSSBEEE-CSCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEET
T ss_pred cCCCCceEE-ccCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECC
Confidence 999887654 666666 78889996 778888888888898 9999988876655 8888999999999999999999
Q ss_pred CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 340 NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 340 D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
|++|++||++ |++...+++|... +.+++|||||++||+++.+..- ......+++|++||+.+|+ +..+.+|.
T Consensus 399 ~~~v~~~d~~tg~~~~~~~~~~~~-----v~~~~~SpDG~~la~~~~~~~~-~~~~~~~~~i~l~d~~~g~-~~~l~~~~ 471 (1045)
T 1k32_A 399 RFEIMTVDLETGKPTVIERSREAM-----ITDFTISDNSRFIAYGFPLKHG-ETDGYVMQAIHVYDMEGRK-IFAATTEN 471 (1045)
T ss_dssp TSEEEEEETTTCCEEEEEECSSSC-----CCCEEECTTSCEEEEEEEECSS-TTCSCCEEEEEEEETTTTE-EEECSCSS
T ss_pred CCeEEEEECCCCceEEeccCCCCC-----ccceEECCCCCeEEEEecCccc-cccCCCCCeEEEEECCCCc-EEEeeCCC
Confidence 9999999996 8888888888876 8899999999999998762000 0000123699999999988 77888876
Q ss_pred CCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 419 GLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
. .+.+++|+|||+.|++++.++.+++|+
T Consensus 472 ~--------------------------------------~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 472 S--------------------------------------HDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp S--------------------------------------BEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred c--------------------------------------ccCCceEcCCCCEEEEEecccCCcCcc
Confidence 2 678899999999999999999988886
No 134
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.97 E-value=1.9e-29 Score=271.24 Aligned_cols=307 Identities=13% Similarity=0.055 Sum_probs=223.3
Q ss_pred EEEecCEEEEEeCCCeEEeeecccCcEE-EEeecCCc-----------------ccEEEEEEeeCCCEEEEEEeecCCCC
Q 011452 101 IVAARDIVFALAQSGVCAAFCRETNQRI-CFLNVTAD-----------------EVIRSLFYNKNNDSLITVSVYASDNF 162 (485)
Q Consensus 101 i~~s~~~ias~s~dgtiklW~~~tG~~l-~tl~g~~~-----------------~~i~sv~~spdg~~Las~S~d~~~d~ 162 (485)
+.+.++.+++.+.|+ | +||..+|+.+ ..+.. +. ..|.+++|||| ..|+.++ +
T Consensus 31 ~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~-~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~----~-- 100 (706)
T 2z3z_A 31 LQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFS-AADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT----Q-- 100 (706)
T ss_dssp CEEETTEEEEEETTE-E-EEEC-------CEEEE-HHHHHTTC-----------CCCEEEEETTT-TEEEEEE----T--
T ss_pred CcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeec-hhHhhhhccchhccccccccCceeEEECCC-CeEEEEE----C--
Confidence 444477888888899 7 9999999984 55544 22 35999999999 6665533 2
Q ss_pred cccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC-----CeEEEEEcC--Cc
Q 011452 163 SSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-----YTMLYSISD--KN 235 (485)
Q Consensus 163 stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~-----g~~l~tl~~--~~ 235 (485)
.++.+|++.+|++ ..+... ...+..++|| |||+.||++ .|++|++||+.+ ++....... ..
T Consensus 101 -----~~i~~~d~~~~~~---~~l~~~--~~~~~~~~~S-pdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~ 168 (706)
T 2z3z_A 101 -----GGLVGFDMLARKV---TYLFDT--NEETASLDFS-PVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTET 168 (706)
T ss_dssp -----TEEEEEETTTTEE---EEEECC--TTCCTTCEEC-TTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTT
T ss_pred -----CEEEEEECCCCce---EEccCC--cccccCCcCC-CCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCC
Confidence 4899999988875 223332 2345678998 899999995 689999999998 876553332 22
Q ss_pred --------------EEEEEEcCCceEEEEEc-------------------------------CCCCeeEEEEecCCCeEE
Q 011452 236 --------------VQEIKISPGIMLLIFTK-------------------------------ASGHVPLKILSIEDGTVL 270 (485)
Q Consensus 236 --------------V~~VafSpg~~ll~sss-------------------------------~~~D~tIklWdi~tG~~L 270 (485)
+.+++|||++..+++++ ...+.+|++||+++|+..
T Consensus 169 ~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~ 248 (706)
T 2z3z_A 169 LVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV 248 (706)
T ss_dssp EEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE
T ss_pred eEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE
Confidence 48999999777666654 124578999999999876
Q ss_pred EEee--cCCcceeEEEEEecCCCEEEEEeCCC-----cEEEEECCCC-eeEEecc-cCCCc---eEEEEEcC--CCcEEE
Q 011452 271 KSFN--HLLHRNKKVDFIEQFNEKLLVKQENE-----NLQILDVRNF-ELTEVSR-TEFMT---PSAFIFLY--ENQLFL 336 (485)
Q Consensus 271 ~tl~--~~~~~~~~V~f~~~~~~~lls~s~D~-----tIkIWDv~tg-~~~~~l~-gh~~~---v~avaFsp--dg~lla 336 (485)
.... .|...+..++|+ |++..|++++.|+ +|++||+.++ ++..... .+..+ +.+++|+| ||++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~ 327 (706)
T 2z3z_A 249 YLQTGEPKEKFLTNLSWS-PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIW 327 (706)
T ss_dssp ECCCCSCTTCEEEEEEEC-TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEE
T ss_pred eeccCCCCceeEeeEEEE-CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEE
Confidence 6553 355667899997 7888898887665 9999999999 4444332 22222 36789999 999999
Q ss_pred EEe-CCcEEEEeC--CCcEEEEeecCCCCCCCCCeeE-EEECCCCCEEEEEecCCCCCCCCcCCCC----eEEEEeCCCC
Q 011452 337 TFR-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKADSDDPLAEGNAG----SINISNILTG 408 (485)
Q Consensus 337 S~s-D~TIklWd~--~G~ll~tl~gH~~~~~~~~v~s-vafSpDG~~LaS~s~d~~~d~~~~~~Dg----tIklWdl~TG 408 (485)
+++ |++++||.+ +|+.+..+.+|... +.+ ++|+|||+.|+.++.+ ++ .|..||+.+|
T Consensus 328 ~~~~~g~~~l~~~~~~~~~~~~l~~~~~~-----v~~~~~~spdg~~l~~~~~~----------~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 328 QSRRDGWNHLYLYDTTGRLIRQVTKGEWE-----VTNFAGFDPKGTRLYFESTE----------ASPLERHFYCIDIKGG 392 (706)
T ss_dssp EECTTSSCEEEEEETTSCEEEECCCSSSC-----EEEEEEECTTSSEEEEEESS----------SCTTCBEEEEEETTCC
T ss_pred EEccCCccEEEEEECCCCEEEecCCCCeE-----EEeeeEEcCCCCEEEEEecC----------CCCceEEEEEEEcCCC
Confidence 998 999999987 48889999888654 666 8999999998877652 33 6777888877
Q ss_pred eEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCC----CcEEEcc
Q 011452 409 KCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRH----GLVHVWS 484 (485)
Q Consensus 409 k~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~D----gtVklWd 484 (485)
+ +..+. |. ..|.+++|||||+.|+.+..+ +.|++||
T Consensus 393 ~-~~~l~-~~--------------------------------------~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 393 K-TKDLT-PE--------------------------------------SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp C-CEESC-CS--------------------------------------SSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred C-ceecc-CC--------------------------------------CceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 6 45554 43 278899999999998877544 5699997
Q ss_pred C
Q 011452 485 N 485 (485)
Q Consensus 485 ~ 485 (485)
.
T Consensus 433 ~ 433 (706)
T 2z3z_A 433 I 433 (706)
T ss_dssp S
T ss_pred C
Confidence 3
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.7e-29 Score=259.46 Aligned_cols=287 Identities=13% Similarity=0.131 Sum_probs=206.3
Q ss_pred cEEEEEEeeCCC-EEEEEEeecCCCCcccceeEEEEeEe--ccCCcCcccceeeeccccCceEEEEeC------------
Q 011452 138 VIRSLFYNKNND-SLITVSVYASDNFSSLRCRSTRIEYI--RRGKPDAGFALFESESLKWPGFVEFDD------------ 202 (485)
Q Consensus 138 ~i~sv~~spdg~-~Las~S~d~~~d~stL~~~t~~lw~i--~~G~~~~~~~lf~~~~~~~~~~V~Fs~------------ 202 (485)
.+....|++.|- .+|+++.....+ -.+ -.+++|||+ .+|+......+.. +..++..++|++
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~-G~~-~~~i~lwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPD-GSY-NVAYQLVDTGGAPGTVLAQNSYKV--NKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTT-SCE-EEEEEEEECSSSTTCEEEEEEEEE--CGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCC-CeE-EEEEEEEeCCCCCCCEEeeeEEEc--ChhHHHHHHHHHHHHHHHHHcCCC
Confidence 466667777774 555776542223 000 038999999 8888632111221 223333444431
Q ss_pred -CCCeEEEEeeCC------CcEEEeecCCCeEEEEE--cCCcEEEEEEcCCceEEEEEcCC-CCeeEEEEecCCCeEEEE
Q 011452 203 -VNGKVLTYSAQD------SIYKVFDLKNYTMLYSI--SDKNVQEIKISPGIMLLIFTKAS-GHVPLKILSIEDGTVLKS 272 (485)
Q Consensus 203 -pnG~~Las~s~D------~tiKlWdl~~g~~l~tl--~~~~V~~VafSpg~~ll~sss~~-~D~tIklWdi~tG~~L~t 272 (485)
+.+..|++++.+ ++|++||+.++. +..+ +...|.+++|||++..+++.+.+ .+.+|++||+++|++. .
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~ 217 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-Q 217 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-E
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-E
Confidence 125666776654 799999997544 3344 45689999999977655554433 3469999999999986 4
Q ss_pred eecCCcceeEEEEEecCCCEEEE-EeCCC--cEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe--CC--cEEE
Q 011452 273 FNHLLHRNKKVDFIEQFNEKLLV-KQENE--NLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR--NR--TVAV 345 (485)
Q Consensus 273 l~~~~~~~~~V~f~~~~~~~lls-~s~D~--tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s--D~--TIkl 345 (485)
+..|...+..++|+ |++.+|+. ++.|+ .|.+||+.++++ ..+.+|...+.+++|+|||+.|+.++ ++ .|.+
T Consensus 218 l~~~~~~~~~~~~s-pdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 218 VASFPRHNGAPAFS-PDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp EECCSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred eecCCCcccCEEEc-CCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 66677788999997 78888884 45555 499999999887 45667888999999999999988887 44 6777
Q ss_pred EeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcc
Q 011452 346 WNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENE 425 (485)
Q Consensus 346 Wd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~ 425 (485)
||+.+..+..+..|..+ +.+++|||||++|++++.+ ..+.+|.+||+.+|++. .+..|.
T Consensus 296 ~d~~~~~~~~l~~~~~~-----~~~~~~spdG~~l~~~~~~--------~g~~~i~~~d~~~~~~~-~l~~~~------- 354 (415)
T 2hqs_A 296 VNINGGAPQRITWEGSQ-----NQDADVSSDGKFMVMVSSN--------GGQQHIAKQDLATGGVQ-VLSSTF------- 354 (415)
T ss_dssp EETTSSCCEECCCSSSE-----EEEEEECTTSSEEEEEEEC--------SSCEEEEEEETTTCCEE-ECCCSS-------
T ss_pred EECCCCCEEEEecCCCc-----ccCeEECCCCCEEEEEECc--------CCceEEEEEECCCCCEE-EecCCC-------
Confidence 79874334566666655 8899999999999998862 11368999999999884 566553
Q ss_pred cccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCC---cEEEccC
Q 011452 426 CSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHG---LVHVWSN 485 (485)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~Dg---tVklWd~ 485 (485)
.+.+++|+|||+.|++++.|+ .|.+||.
T Consensus 355 --------------------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 355 --------------------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp --------------------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred --------------------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 678999999999999999888 7999873
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.97 E-value=1.7e-28 Score=235.02 Aligned_cols=277 Identities=9% Similarity=-0.009 Sum_probs=214.9
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcc-cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADE-VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAG 183 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~-~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~ 183 (485)
+++|++++.++++++||..+|+.+.++...+.. .+.+++|+|||+.|+.++. .+ .++.+|++.+|+...
T Consensus 1 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~---~~------~~v~~~d~~~~~~~~- 70 (337)
T 1pby_B 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN---KS------ESLVKIDLVTGETLG- 70 (337)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET---TT------TEEEEEETTTCCEEE-
T ss_pred CcEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC---CC------CeEEEEECCCCCeEe-
Confidence 368999999999999999999999988753422 3789999999988766442 33 589999998888632
Q ss_pred cceeeecc----ccCceEEEEeCCCCeEEEEee------------CCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCce
Q 011452 184 FALFESES----LKWPGFVEFDDVNGKVLTYSA------------QDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIM 246 (485)
Q Consensus 184 ~~lf~~~~----~~~~~~V~Fs~pnG~~Las~s------------~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~ 246 (485)
.+.... ...+..++|+ |||+.|+.++ .|+.|.+||+++++.+..+. +..+..++|||++.
T Consensus 71 --~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 147 (337)
T 1pby_B 71 --RIDLSTPEERVKSLFGAALS-PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS 147 (337)
T ss_dssp --EEECCBTTEEEECTTCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSS
T ss_pred --eEEcCCcccccccccceEEC-CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCC
Confidence 122211 1156689998 7998888875 68999999999999888776 45788999999776
Q ss_pred EEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEe-CCC-----------------------cE
Q 011452 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-ENE-----------------------NL 302 (485)
Q Consensus 247 ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s-~D~-----------------------tI 302 (485)
.+..+ +..|.+||+++|+++..+..+. ....+.|+ |++..+++.+ .++ +|
T Consensus 148 ~l~~~----~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 148 KLYGL----GRDLHVMDPEAGTLVEDKPIQS-WEAETYAQ-PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp CEEEE----SSSEEEEETTTTEEEEEECSTT-TTTTTBCC-CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred EEEEe----CCeEEEEECCCCcEeeeeeccc-cCCCceeC-CCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 44443 2589999999999998887533 11234554 6676665554 333 47
Q ss_pred EEEECCCCeeEE-ecccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEE
Q 011452 303 QILDVRNFELTE-VSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 380 (485)
Q Consensus 303 kIWDv~tg~~~~-~l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~L 380 (485)
.+||+.++++.. .+..|...+..++|+|||++|+++ |++|.+||+. ++++..+..+. . +.+++|+|||++|
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~-~-----~~~~~~s~dg~~l 294 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPH-S-----YYSVNVSTDGSTV 294 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSS-C-----CCEEEECTTSCEE
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCC-c-----eeeEEECCCCCEE
Confidence 999999998752 244566788999999999999888 8999999996 88888887543 2 6799999999999
Q ss_pred EEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 381 ISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 381 aS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
++++. +++|++||+.+++.+.++..+.
T Consensus 295 ~~~~~-----------~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 295 WLGGA-----------LGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEESB-----------SSEEEEEETTTCCEEEEEECGG
T ss_pred EEEcC-----------CCcEEEEECcCCcEEEEEEcCC
Confidence 98865 7999999999999999997764
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=2e-28 Score=278.13 Aligned_cols=316 Identities=11% Similarity=0.023 Sum_probs=230.0
Q ss_pred ccceEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeec--CCCCcccceeEEEE
Q 011452 95 RSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYA--SDNFSSLRCRSTRI 172 (485)
Q Consensus 95 ~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~--~~d~stL~~~t~~l 172 (485)
...+..+.|+++.||..+. +.+.+|++.+|+. ..|.+ |...|.+++|||||+.||+++.+. ..+ .++.+
T Consensus 14 ~~~~~~~~~S~~~iaf~~~-~~l~~~~~~gg~~-~~lt~-~~~~v~~~~~SPDG~~la~~s~~~~~~~~------~~i~~ 84 (1045)
T 1k32_A 14 PNLLLNPDIHGDRIIFVCC-DDLWEHDLKSGST-RKIVS-NLGVINNARFFPDGRKIAIRVMRGSSLNT------ADLYF 84 (1045)
T ss_dssp CCCCEEEEEETTEEEEEET-TEEEEEETTTCCE-EEEEC-SSSEEEEEEECTTSSEEEEEEEESTTCCE------EEEEE
T ss_pred cceEeCcEEeCCEEEEEEC-CcEEEEECCCCcE-EEeee-CCCcccCeEECCCCCEEEEEEeeccCCCC------CeEEE
Confidence 4567888899888888876 7999999987764 45766 778899999999999999988652 122 48899
Q ss_pred eEeccCCcCcccceeeeccccCc-------eEEEEeCCCCeEEEEeeCC------CcEEEeecCCCeEEEE---------
Q 011452 173 EYIRRGKPDAGFALFESESLKWP-------GFVEFDDVNGKVLTYSAQD------SIYKVFDLKNYTMLYS--------- 230 (485)
Q Consensus 173 w~i~~G~~~~~~~lf~~~~~~~~-------~~V~Fs~pnG~~Las~s~D------~tiKlWdl~~g~~l~t--------- 230 (485)
|++..|++ ..|..+ ...+ ..++|+ |||+++++++.| ..+.+||+.++++...
T Consensus 85 ~d~~~g~~---~~lt~~--~~~~~~~~~~~~~~~~S-pDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~ 158 (1045)
T 1k32_A 85 YNGENGEI---KRITYF--SGKSTGRRMFTDVAGFD-PDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHIL 158 (1045)
T ss_dssp EETTTTEE---EECCCC--CEEEETTEECSEEEEEC-TTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEE
T ss_pred EECCCCCe---EEcccC--CCcccccccccccccCC-CCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceee
Confidence 99877764 122222 2223 689998 799988877755 4577788877663210
Q ss_pred ----------------------------------------E--cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCC-C
Q 011452 231 ----------------------------------------I--SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIED-G 267 (485)
Q Consensus 231 ----------------------------------------l--~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~t-G 267 (485)
+ +...|..++|+|+ .++.+++ .|++++||.+.. |
T Consensus 159 ~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~--~dg~~~l~~~~~~g 235 (1045)
T 1k32_A 159 FADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITD--IDGFGQIYSTDLDG 235 (1045)
T ss_dssp EETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEEC--TTSSCEEEEEETTS
T ss_pred eCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEe--ccCceEEEEEeCCC
Confidence 0 1124555666666 3333322 335666775432 2
Q ss_pred eEEEEe---------------------------------------ec-----------CCcceeEEEEEecCCCEEEEEe
Q 011452 268 TVLKSF---------------------------------------NH-----------LLHRNKKVDFIEQFNEKLLVKQ 297 (485)
Q Consensus 268 ~~L~tl---------------------------------------~~-----------~~~~~~~V~f~~~~~~~lls~s 297 (485)
..++.+ .+ |...+..++|++|++..|++++
T Consensus 236 ~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 236 KDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp CSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred CcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE
Confidence 222222 22 1124567788635677777766
Q ss_pred CCCcEEEEECCCCeeEEecccCCC-ceEEEEEcCCCcEEEEEe-CCcEE-EEeCCCcEEEEeecCCCCCCCCCeeEEEEC
Q 011452 298 ENENLQILDVRNFELTEVSRTEFM-TPSAFIFLYENQLFLTFR-NRTVA-VWNFRGELVTSFEDHLLWHPDCNTNNIYIT 374 (485)
Q Consensus 298 ~D~tIkIWDv~tg~~~~~l~gh~~-~v~avaFspdg~llaS~s-D~TIk-lWd~~G~ll~tl~gH~~~~~~~~v~svafS 374 (485)
+++|.+||+.+++... +..|.. .+..++|+ ||+.|++++ +..|. +||+.+..+..+.+|... +..++||
T Consensus 316 -~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~-----~~~~~~S 387 (1045)
T 1k32_A 316 -RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGN-----VFAMGVD 387 (1045)
T ss_dssp -TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCS-----EEEEEEC
T ss_pred -cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccc-----eeeeEEC
Confidence 7889999999887665 556777 89999999 999999999 77888 889975545566677655 8999999
Q ss_pred CCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhc
Q 011452 375 SDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAE 454 (485)
Q Consensus 375 pDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (485)
|||++||+++. +++|++||+.+|++...+.+|..
T Consensus 388 pDG~~la~~~~-----------~~~v~~~d~~tg~~~~~~~~~~~----------------------------------- 421 (1045)
T 1k32_A 388 RNGKFAVVAND-----------RFEIMTVDLETGKPTVIERSREA----------------------------------- 421 (1045)
T ss_dssp TTSSEEEEEET-----------TSEEEEEETTTCCEEEEEECSSS-----------------------------------
T ss_pred CCCCEEEEECC-----------CCeEEEEECCCCceEEeccCCCC-----------------------------------
Confidence 99999999886 68999999999999988878863
Q ss_pred ccCCeEEEEEcCCCCEEEEecCCC----------cEEEccC
Q 011452 455 ALEDITALFYDEDRNEIYTGNRHG----------LVHVWSN 485 (485)
Q Consensus 455 ~l~~V~sl~fspDg~~LaSgs~Dg----------tVklWd~ 485 (485)
.|.+++|||||+.||+++.++ +|++||.
T Consensus 422 ---~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 422 ---MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp ---CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred ---CccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 778899999999999988755 9999984
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=6.7e-27 Score=226.15 Aligned_cols=281 Identities=13% Similarity=0.126 Sum_probs=206.6
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCc-Ccc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKP-DAG 183 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~-~~~ 183 (485)
+..+++.+.++++++||.++|+.+..+.. +...+ +++|+|||+.|++++. .+ .++.+|++.+|++ ..
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~--~~-------~~i~~~d~~~~~~~~~- 77 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITL-GYDFV-DTAITSDCSNVVVTSD--FC-------QTLVQIETQLEPPKVV- 77 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEEC-CCCEE-EEEECSSSCEEEEEES--TT-------CEEEEEECSSSSCEEE-
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEc-cCCcc-eEEEcCCCCEEEEEeC--CC-------CeEEEEECCCCceeEE-
Confidence 55688889999999999999999988876 44456 9999999998877663 23 4899999988875 21
Q ss_pred cceeeeccccCceE-EEEeCCCCeEEEEeeCCC---cEEEeecCCCeEEEEEc-CCcEEEEEEcCCce-EEEEEcCCCCe
Q 011452 184 FALFESESLKWPGF-VEFDDVNGKVLTYSAQDS---IYKVFDLKNYTMLYSIS-DKNVQEIKISPGIM-LLIFTKASGHV 257 (485)
Q Consensus 184 ~~lf~~~~~~~~~~-V~Fs~pnG~~Las~s~D~---tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~-ll~sss~~~D~ 257 (485)
.+.. ...+.. ++|+ |||++|+.+..++ +|++||+++++.+.++. +....+++|+|++. ++++... +.
T Consensus 78 --~~~~--~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~ 150 (331)
T 3u4y_A 78 --AIQE--GQSSMADVDIT-PDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS--SA 150 (331)
T ss_dssp --EEEE--CSSCCCCEEEC-TTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET--TT
T ss_pred --eccc--CCCCccceEEC-CCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC--CC
Confidence 2222 234556 9998 7999988555442 99999999999988886 45789999999765 5555443 24
Q ss_pred e-EEEEecCCCeEE-----EEeecCCcceeEEEEEecCCCEEEEEe-CCCcEEEEECCCCee---EEecccCCCceEEEE
Q 011452 258 P-LKILSIEDGTVL-----KSFNHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNFEL---TEVSRTEFMTPSAFI 327 (485)
Q Consensus 258 t-IklWdi~tG~~L-----~tl~~~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~tg~~---~~~l~gh~~~v~ava 327 (485)
. |++|++.....+ +.+. .......++|+ |++.++++++ .+++|++||+.+++. +..+..+ ..+..++
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~ 227 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFIS-GGTRPFNITFT-PDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIV 227 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEEC-SSSSEEEEEEC-TTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEE
T ss_pred ceEEEEEECCCCcEeecCCcccc-CCCCccceEEC-CCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEE
Confidence 6 999998764443 2222 22456788986 7787777764 799999999999998 7777644 5788999
Q ss_pred EcCCCcEEE-EEe-CCcEEEEeCC-CcE--EEEeecCCCCCC--CCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeE
Q 011452 328 FLYENQLFL-TFR-NRTVAVWNFR-GEL--VTSFEDHLLWHP--DCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSI 400 (485)
Q Consensus 328 Fspdg~lla-S~s-D~TIklWd~~-G~l--l~tl~gH~~~~~--~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtI 400 (485)
|+|||++|+ +.. +++|.+||.+ |++ +.++..+...++ ...++.++|+|||++|+.++.+ +++|
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~----------~~~v 297 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI----------SREL 297 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT----------TTEE
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC----------CCcE
Confidence 999999655 444 8899999996 887 666665522111 1113569999999999777652 6899
Q ss_pred EEEeCCCCeEEEEecCCC
Q 011452 401 NISNILTGKCLAKIRASN 418 (485)
Q Consensus 401 klWdl~TGk~l~tl~gH~ 418 (485)
++||+.+ +.+..+.+..
T Consensus 298 ~v~d~~~-~~~~~~~~~~ 314 (331)
T 3u4y_A 298 KVFTISG-KVVGYVAGIE 314 (331)
T ss_dssp EEEETTS-CEEEECTTCC
T ss_pred EEEEecC-Ccccceeccc
Confidence 9999975 4445555543
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=2.3e-28 Score=263.68 Aligned_cols=281 Identities=12% Similarity=0.121 Sum_probs=213.9
Q ss_pred cccEEEEEEeeCCCEEEEEEe-ecCCCCcccceeEEEEeEeccCCcCcccceeeeccc----------------------
Q 011452 136 DEVIRSLFYNKNNDSLITVSV-YASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESL---------------------- 192 (485)
Q Consensus 136 ~~~i~sv~~spdg~~Las~S~-d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~---------------------- 192 (485)
...|.+++|||||+.|++++. ++... ..++.+|++.+|+.. .++.....
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~-----~~~i~~~d~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRN-----QLDLWSYDIGSGQTR---LLVDSKVVLPGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTT-----EEEEEEEETTTCCEE---EEECGGGTC--------------------C
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCc-----ccEEEEEECCCCcee---Eccchhhcccccccccchhhhhhhhhhhcc
Confidence 346999999999999999885 32111 248999999888762 23332111
Q ss_pred -cCceEEEEeCCCCeEEEEeeCCCcEEEeecCCC---eEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCC
Q 011452 193 -KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY---TMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIED 266 (485)
Q Consensus 193 -~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g---~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~t 266 (485)
..+..++|| |||+.|++++. ++|++||+.++ +. ..+. ...+..++|||++..+++.+. .+|++||+.+
T Consensus 108 ~~~v~~~~~S-pDg~~l~~~~~-~~i~~~d~~~~~~~~~-~~l~~~~~~~~~~~~SPDG~~la~~~~---~~i~~~d~~~ 181 (741)
T 2ecf_A 108 MTGIVDYQWS-PDAQRLLFPLG-GELYLYDLKQEGKAAV-RQLTHGEGFATDAKLSPKGGFVSFIRG---RNLWVIDLAS 181 (741)
T ss_dssp CEESCCCEEC-TTSSEEEEEET-TEEEEEESSSCSTTSC-CBCCCSSSCEEEEEECTTSSEEEEEET---TEEEEEETTT
T ss_pred ccCcceeEEC-CCCCEEEEEeC-CcEEEEECCCCCcceE-EEcccCCcccccccCCCCCCEEEEEeC---CcEEEEecCC
Confidence 124578998 89999999986 99999999988 43 3333 467999999998876666553 4899999999
Q ss_pred CeEEEEeecCCcc----------------eeEEEEEecCCCEEEEEeCCC------------------------------
Q 011452 267 GTVLKSFNHLLHR----------------NKKVDFIEQFNEKLLVKQENE------------------------------ 300 (485)
Q Consensus 267 G~~L~tl~~~~~~----------------~~~V~f~~~~~~~lls~s~D~------------------------------ 300 (485)
|++.+....+... +..++|+ ||+.+|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S-pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA-PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC-TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEEC-CCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 9887765543322 3679996 7899999987665
Q ss_pred ---cEEEEECCC-CeeEEecc--cCCCceEEEEEcCCCcEEEEEe------CCcEEEEeCC-CcEEEEeecCCC-CCCCC
Q 011452 301 ---NLQILDVRN-FELTEVSR--TEFMTPSAFIFLYENQLFLTFR------NRTVAVWNFR-GELVTSFEDHLL-WHPDC 366 (485)
Q Consensus 301 ---tIkIWDv~t-g~~~~~l~--gh~~~v~avaFspdg~llaS~s------D~TIklWd~~-G~ll~tl~gH~~-~~~~~ 366 (485)
+|.+||+.+ +++..... +|...+.+++| |||+.|+.++ +.+|.+||++ |++...+..|.. |..
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~-- 337 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVP-- 337 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCC--
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCC--
Confidence 899999999 98876654 47889999999 9999998664 3589999996 898888877653 311
Q ss_pred CeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC-CCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccc
Q 011452 367 NTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL-TGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHA 445 (485)
Q Consensus 367 ~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~-TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (485)
.+.+++|||||++|++++. ||+++||.+. +|+ +..|.+|..
T Consensus 338 ~~~~~~~spdg~~~~~~~~-----------~g~~~l~~~~~~~~-~~~l~~~~~-------------------------- 379 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSSER-----------TGFQHLYRIDSKGK-AAALTHGNW-------------------------- 379 (741)
T ss_dssp CCSCCEECTTSCEEEEECT-----------TSSCEEEEECSSSC-EEESCCSSS--------------------------
T ss_pred cCCceEECCCCeEEEEecC-----------CCccEEEEEcCCCC-eeeeeecce--------------------------
Confidence 1468999999999888765 6888888775 567 888888752
Q ss_pred cccccchhcccCCeEEE-EEcCCCCEEE-EecCCC--cEEEcc
Q 011452 446 SRIRSTVAEALEDITAL-FYDEDRNEIY-TGNRHG--LVHVWS 484 (485)
Q Consensus 446 ~~~~~~~~~~l~~V~sl-~fspDg~~La-Sgs~Dg--tVklWd 484 (485)
.|.++ +|||||+.|+ +++.|+ +++||+
T Consensus 380 ------------~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 380 ------------SVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp ------------CEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred ------------EEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 67777 5999999775 566666 999996
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=9.1e-27 Score=225.21 Aligned_cols=278 Identities=8% Similarity=0.065 Sum_probs=195.4
Q ss_pred EEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEe-eCCCcEEEe
Q 011452 142 LFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYS-AQDSIYKVF 220 (485)
Q Consensus 142 v~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~-s~D~tiKlW 220 (485)
..|+++++.+..+. . .+ +++.+||+.+|++.. .+.. ....+ .++|+ |||+.|..+ ..|++|.+|
T Consensus 3 ~~~~~~~~~~~v~~--~-~~------~~v~~~d~~~~~~~~---~~~~-~~~~~-~~~~s-~dg~~l~~~~~~~~~i~~~ 67 (331)
T 3u4y_A 3 AMFQTTSNFGIVVE--Q-HL------RRISFFSTDTLEILN---QITL-GYDFV-DTAIT-SDCSNVVVTSDFCQTLVQI 67 (331)
T ss_dssp ----CCCCEEEEEE--G-GG------TEEEEEETTTCCEEE---EEEC-CCCEE-EEEEC-SSSCEEEEEESTTCEEEEE
T ss_pred eeEcCCCCEEEEEe--c-CC------CeEEEEeCcccceee---eEEc-cCCcc-eEEEc-CCCCEEEEEeCCCCeEEEE
Confidence 35667766655433 2 23 599999999898732 2322 23445 89998 799855544 458999999
Q ss_pred ecCCCeE-EEEEc-CCcEEE-EEEcCCceEEEEEcCCCCe--eEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEE
Q 011452 221 DLKNYTM-LYSIS-DKNVQE-IKISPGIMLLIFTKASGHV--PLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLV 295 (485)
Q Consensus 221 dl~~g~~-l~tl~-~~~V~~-VafSpg~~ll~sss~~~D~--tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls 295 (485)
|+++++. ...+. +..... ++|||++..++. ....+. +|++||+++|+++.++..+ .....++|+ |++.++++
T Consensus 68 d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s-pdg~~l~~ 144 (331)
T 3u4y_A 68 ETQLEPPKVVAIQEGQSSMADVDITPDDQFAVT-VTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAIS-PNGNGLIL 144 (331)
T ss_dssp ECSSSSCEEEEEEECSSCCCCEEECTTSSEEEE-CCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEEC-TTSSCEEE
T ss_pred ECCCCceeEEecccCCCCccceEECCCCCEEEE-ecCCCCcccEEEEECCCCCeEEEEECC-CCccceEEC-CCCCEEEE
Confidence 9999987 66654 334444 999997766554 332223 9999999999999998754 445789996 77777777
Q ss_pred E-eCCCc-EEEEECCCCeeE-----EecccCCCceEEEEEcCCCc-EEEEEe-CCcEEEEeCC-CcE---EEEeecCCCC
Q 011452 296 K-QENEN-LQILDVRNFELT-----EVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-GEL---VTSFEDHLLW 362 (485)
Q Consensus 296 ~-s~D~t-IkIWDv~tg~~~-----~~l~gh~~~v~avaFspdg~-llaS~s-D~TIklWd~~-G~l---l~tl~gH~~~ 362 (485)
+ ..+++ |++|++.....+ +.+ .+...+..++|+|||+ ++++.. +++|.+||++ |++ +.++..+. .
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~-~ 222 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNN-L 222 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSS-C
T ss_pred EecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCC-C
Confidence 6 56688 999998864332 222 3345689999999998 455666 9999999996 888 88888653 2
Q ss_pred CCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE--EEEecCCCCCCCCcccccCCCCCCCCcccc
Q 011452 363 HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC--LAKIRASNGLPAENECSCSGDYSSGSCNVK 440 (485)
Q Consensus 363 ~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~--l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~ 440 (485)
+..++|+|||++|+.++. .+++|.+||+.+|+. +.++..+-..
T Consensus 223 -----~~~~~~spdg~~l~v~~~----------~~~~i~~~d~~~~~~~~~~~~~~~~~~-------------------- 267 (331)
T 3u4y_A 223 -----PGTIVVSRDGSTVYVLTE----------STVDVFNFNQLSGTLSFVKSFGHGLLI-------------------- 267 (331)
T ss_dssp -----CCCEEECTTSSEEEEECS----------SEEEEEEEETTTTEEEEEEEEECCCCC--------------------
T ss_pred -----CceEEECCCCCEEEEEEc----------CCCEEEEEECCCCceeeeccccccccc--------------------
Confidence 678999999998776653 268899999999998 6666554100
Q ss_pred ccccccccccchhcccCCeEEEEEcCCCCEEEEec-CCCcEEEccC
Q 011452 441 KHSHASRIRSTVAEALEDITALFYDEDRNEIYTGN-RHGLVHVWSN 485 (485)
Q Consensus 441 ~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs-~DgtVklWd~ 485 (485)
+ . .....+.+++|+|||+.|+.++ .+++|+|||+
T Consensus 268 -~---~-------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 268 -D---P-------RPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp -C---C-------GGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred -C---C-------CCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 0 0 0001335689999999986554 5679999984
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.96 E-value=9.2e-29 Score=261.33 Aligned_cols=273 Identities=9% Similarity=-0.056 Sum_probs=201.4
Q ss_pred EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCe
Q 011452 127 RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGK 206 (485)
Q Consensus 127 ~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~ 206 (485)
+++.+...+...|++|+|+|||++||++|.. + ++++||.+..|++ .++... +...+..++|+ || +
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~DG~~la~~s~~---~------g~~~lw~~~~g~~---~~lt~~-~~~~~~~~~~s-pd-~ 76 (582)
T 3o4h_A 12 IVRDVERLIAVEKYSLQGVVDGDKLLVVGFS---E------GSVNAYLYDGGET---VKLNRE-PINSVLDPHYG-VG-R 76 (582)
T ss_dssp HHHHHHHHHHSCEEEEEEEETTTEEEEEEEE---T------TEEEEEEEETTEE---EECCSS-CCSEECEECTT-CS-E
T ss_pred HHHHHHHHhccchheeecCCCCCeEEEEEcc---C------CceeEEEEcCCCc---Eeeecc-cccccccccCC-CC-e
Confidence 3334443345579999999999999998852 3 4899999866654 122222 22345688998 78 8
Q ss_pred EEEEeeC---CCcEEEeecCC---CeEEEEEc-CCcEEEEEEcCCc--eEEEEEcCCCCeeEEEEecCCCeEEEEeecCC
Q 011452 207 VLTYSAQ---DSIYKVFDLKN---YTMLYSIS-DKNVQEIKISPGI--MLLIFTKASGHVPLKILSIEDGTVLKSFNHLL 277 (485)
Q Consensus 207 ~Las~s~---D~tiKlWdl~~---g~~l~tl~-~~~V~~VafSpg~--~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~ 277 (485)
+|++++. +..++||.+.. +... .+. ...+...+|||++ .++++.+ .+.+ .|||+++|++.....++.
T Consensus 77 ~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~--~~~~-~l~d~~~g~~~~l~~~~~ 152 (582)
T 3o4h_A 77 VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGAT--EDRV-ALYALDGGGLRELARLPG 152 (582)
T ss_dssp EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEEC--SSCE-EEEEEETTEEEEEEEESS
T ss_pred EEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecC--CCCc-eEEEccCCcEEEeecCCC
Confidence 8887765 66778876543 3333 342 3344456777543 4555433 3344 499999998776665432
Q ss_pred cceeEEEEEecCCCEEEEEeCC----CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CC--cEEEEeCC-
Q 011452 278 HRNKKVDFIEQFNEKLLVKQEN----ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NR--TVAVWNFR- 349 (485)
Q Consensus 278 ~~~~~V~f~~~~~~~lls~s~D----~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~--TIklWd~~- 349 (485)
.+++|+ |||.+|++++.| .+|.+||+.++++. .+.+|...+..++|||||++|+++. |+ +|.+||++
T Consensus 153 ---~~~~~s-pDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 153 ---FGFVSD-IRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp ---CEEEEE-EETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred ---ceEEEC-CCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 789997 789899887766 78999999999876 5678888999999999999999777 88 99999997
Q ss_pred CcEEEEeecCCCCCCCCCeeEEE--------ECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCC
Q 011452 350 GELVTSFEDHLLWHPDCNTNNIY--------ITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLP 421 (485)
Q Consensus 350 G~ll~tl~gH~~~~~~~~v~sva--------fSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~ 421 (485)
|++. .+++|... +.+++ |||||+++++++. |++++||++ |+++.++ .
T Consensus 228 ~~~~-~~~~~~~~-----~~~~~~~~~~~~~~spdg~~~~~~~~-----------~g~~~l~~~--g~~~~~~---~--- 282 (582)
T 3o4h_A 228 GSVE-DLELPSKD-----FSSYRPTAITWLGYLPDGRLAVVARR-----------EGRSAVFID--GERVEAP---Q--- 282 (582)
T ss_dssp CCEE-ECCCSCSH-----HHHHCCSEEEEEEECTTSCEEEEEEE-----------TTEEEEEET--TEEECCC---S---
T ss_pred CcEE-EccCCCcC-----hhhhhhccccceeEcCCCcEEEEEEc-----------CCcEEEEEE--CCeeccC---C---
Confidence 7777 88888765 66777 9999999999987 799999999 8876522 2
Q ss_pred CCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCc---EEEcc
Q 011452 422 AENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGL---VHVWS 484 (485)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~Dgt---VklWd 484 (485)
..|.+++|+ ||+.+++++.+.+ |.+|+
T Consensus 283 -----------------------------------~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 283 -----------------------------------GNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp -----------------------------------SEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred -----------------------------------CceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 178899999 9999999998865 55554
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=7e-29 Score=266.50 Aligned_cols=278 Identities=13% Similarity=0.099 Sum_probs=202.0
Q ss_pred cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccc--cCceEEEEeCCCCeEEEEeeCC-
Q 011452 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESL--KWPGFVEFDDVNGKVLTYSAQD- 214 (485)
Q Consensus 138 ~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~--~~~~~V~Fs~pnG~~Las~s~D- 214 (485)
.+.+++|||||++|++ + .| +++++|++.+|+.. .++..... ..+..++|| |||+.||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-~----~d------g~i~~~d~~~g~~~---~~~~~~~~~~~~v~~~~~S-pDg~~l~~~~~~~ 82 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-E----QK------GTVRLWNVETNTST---VLIEGKKIESLRAIRYEIS-PDREYALFSYNVE 82 (723)
T ss_dssp CCCCCCBSSSSCBCCC-C----SS------SCEEEBCGGGCCCE---EEECTTTTTTTTCSEEEEC-TTSSEEEEEESCC
T ss_pred cccccEEcCCCcEEEE-e----CC------CCEEEEECCCCcEE---EEeccccccccccceEEEC-CCCCEEEEEecCc
Confidence 4788999999996654 3 23 48999999999872 34443211 136789998 899999999875
Q ss_pred --------CcEEEeecCCCeEEEEEc---C--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcce-
Q 011452 215 --------SIYKVFDLKNYTMLYSIS---D--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRN- 280 (485)
Q Consensus 215 --------~tiKlWdl~~g~~l~tl~---~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~- 280 (485)
++|.|||++++++ ..+. + ..|..++|||++..+++.+. .+|++||+.+|++.+....+...+
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~---~~i~~~~~~~g~~~~~~~~~~~~~~ 158 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE---NNIYYCAHVGKQAIRVVSTGKEGVI 158 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET---TEEEEESSSSSCCEEEECCCBTTTE
T ss_pred cceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC---CeEEEEECCCCceEEEecCCCCCce
Confidence 7788999999886 3332 1 24889999997766666553 589999999999887766533322
Q ss_pred -----------------eEEEEEecCCCEEEEEeCCC----------------------------------cEEEEECCC
Q 011452 281 -----------------KKVDFIEQFNEKLLVKQENE----------------------------------NLQILDVRN 309 (485)
Q Consensus 281 -----------------~~V~f~~~~~~~lls~s~D~----------------------------------tIkIWDv~t 309 (485)
..++|+ ||+.+|++++.|+ +|++||+.+
T Consensus 159 ~~g~~~~v~~ee~~~~~~~~~~S-pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~ 237 (723)
T 1xfd_A 159 YNGLSDWLYEEEILKTHIAHWWS-PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG 237 (723)
T ss_dssp EEEECCHHHHHTTSSSSEEEEEC-TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS
T ss_pred ECcccceeEEEEeccCcceEEEC-CCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC
Confidence 689996 7899999887543 899999999
Q ss_pred CeeEEecccC------CCceEEEEEcCCCcEEEEEe-C----CcEEEEeCC-CcEEEEeec-CCCCCCCCCeeEEEECCC
Q 011452 310 FELTEVSRTE------FMTPSAFIFLYENQLFLTFR-N----RTVAVWNFR-GELVTSFED-HLLWHPDCNTNNIYITSD 376 (485)
Q Consensus 310 g~~~~~l~gh------~~~v~avaFspdg~llaS~s-D----~TIklWd~~-G~ll~tl~g-H~~~~~~~~v~svafSpD 376 (485)
+++...+..| ...+.+++|||||++|++.+ . .+|.+||+. |++...+.. |..|.... ...++||||
T Consensus 238 ~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-~~~~~~spd 316 (723)
T 1xfd_A 238 PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQ-NEEPVFSKD 316 (723)
T ss_dssp SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCC-CCCCEECTT
T ss_pred CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEecc-CCCceEcCC
Confidence 9876666554 67899999999999998775 2 589999996 888877754 44451100 027899999
Q ss_pred CCEEEEE-ecCCCCCCCCcCCCC------eEEEEe-CCCCe--EEEEecCCCCCCCCcccccCCCCCCCCcccccccccc
Q 011452 377 QDLIISY-CKADSDDPLAEGNAG------SINISN-ILTGK--CLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHAS 446 (485)
Q Consensus 377 G~~LaS~-s~d~~~d~~~~~~Dg------tIklWd-l~TGk--~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (485)
|++|+.. +. .|+ .|.+|| ..+++ |+..|..+.
T Consensus 317 g~~l~~~~~~----------~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~---------------------------- 358 (723)
T 1xfd_A 317 GRKFFFIRAI----------PQGGRGKFYHITVSSSQPNSSNDNIQSITSGD---------------------------- 358 (723)
T ss_dssp SCSEEEEEEE----------CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS----------------------------
T ss_pred CCeEEEEEec----------ccCCCcceeEEEEEeccCCCCccceeEeecCC----------------------------
Confidence 9988865 33 145 577777 34444 255565432
Q ss_pred ccccchhcccCCeEE-EEEcCCCCEEEEecCC---CcEEEcc
Q 011452 447 RIRSTVAEALEDITA-LFYDEDRNEIYTGNRH---GLVHVWS 484 (485)
Q Consensus 447 ~~~~~~~~~l~~V~s-l~fspDg~~LaSgs~D---gtVklWd 484 (485)
..|.. ++|||||+.||..+.+ ++++||+
T Consensus 359 ----------~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 359 ----------WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp ----------SCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred ----------eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 14444 7999999999766544 8999996
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=1.9e-26 Score=221.37 Aligned_cols=277 Identities=9% Similarity=0.063 Sum_probs=191.9
Q ss_pred CEEEEE-eCCCeEEeeecc-cCc--EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEec--cCC
Q 011452 106 DIVFAL-AQSGVCAAFCRE-TNQ--RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIR--RGK 179 (485)
Q Consensus 106 ~~ias~-s~dgtiklW~~~-tG~--~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~--~G~ 179 (485)
++|+++ +.|+++++|++. +|+ .+.++. +...+.+++|+|+|+.|++++. ++ ..+.+|++. .|+
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~---~~------~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVR---PE------FRVLAYRIAPDDGA 73 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEET---TT------TEEEEEEECTTTCC
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeec---CC------CeEEEEEecCCCCc
Confidence 444444 889999999985 453 344432 5567899999999999988763 22 489999986 566
Q ss_pred cCcccceeeeccccCceEEEEeCCCCeEEEEee-CCCcEEEeecC---CCeEEEEEcC-CcEEEEEEcCCce-EEEEEcC
Q 011452 180 PDAGFALFESESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLK---NYTMLYSISD-KNVQEIKISPGIM-LLIFTKA 253 (485)
Q Consensus 180 ~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s-~D~tiKlWdl~---~g~~l~tl~~-~~V~~VafSpg~~-ll~sss~ 253 (485)
+.. +........+..++|+ |+|+.|+.++ .|++|++||+. +++.+..+.. ..+.+++|+|++. +++++.
T Consensus 74 ~~~---~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~- 148 (343)
T 1ri6_A 74 LTF---AAESALPGSLTHISTD-HQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL- 148 (343)
T ss_dssp EEE---EEEEECSSCCSEEEEC-TTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG-
T ss_pred eee---ccccccCCCCcEEEEc-CCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC-
Confidence 421 1111112357789998 7999775554 58999999994 4455666653 4689999999665 554432
Q ss_pred CCCeeEEEEecCC-CeEEE----EeecC-CcceeEEEEEecCCCEEEEEe-CCCcEEEEECC--CCee--EEec---c-c
Q 011452 254 SGHVPLKILSIED-GTVLK----SFNHL-LHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR--NFEL--TEVS---R-T 318 (485)
Q Consensus 254 ~~D~tIklWdi~t-G~~L~----tl~~~-~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~--tg~~--~~~l---~-g 318 (485)
.+.+|++||+.+ |+... .+..+ ......++|+ |++..+++++ .+++|++||+. +++. .+.. . +
T Consensus 149 -~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 149 -KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH-PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp -GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred -CCCEEEEEEecCCCceeeecccccccCCCCCcceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 347999999998 86643 23322 2356688986 7788787765 89999999995 4543 2222 1 1
Q ss_pred C--CCceEEEEEcCCCcEEE-EEe-CCcEEEEeCC--C---cEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCC
Q 011452 319 E--FMTPSAFIFLYENQLFL-TFR-NRTVAVWNFR--G---ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSD 389 (485)
Q Consensus 319 h--~~~v~avaFspdg~lla-S~s-D~TIklWd~~--G---~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~ 389 (485)
| ...+..++|+|||+.|+ +.+ |++|++||++ + +.+..+..+.. +..++|+|||++|+.++.
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~~---- 296 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ------PRGFNVDHSGKYLIAAGQ---- 296 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS------CCCEEECTTSSEEEEECT----
T ss_pred ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc------cceEEECCCCCEEEEecC----
Confidence 1 34677899999998666 665 9999999996 3 34555655432 678999999999998874
Q ss_pred CCCCcCCCCeEEEE--eCCCCe--EEEEecC
Q 011452 390 DPLAEGNAGSINIS--NILTGK--CLAKIRA 416 (485)
Q Consensus 390 d~~~~~~DgtIklW--dl~TGk--~l~tl~g 416 (485)
.+++|.+| |..+|+ .+..+..
T Consensus 297 ------~~~~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 297 ------KSHHISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp ------TTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred ------CCCeEEEEEEcCCCceeeEcccccc
Confidence 27999999 555775 3445543
No 144
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.96 E-value=3.5e-28 Score=262.34 Aligned_cols=318 Identities=11% Similarity=0.036 Sum_probs=218.0
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcc---cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcC
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADE---VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD 181 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~---~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~ 181 (485)
++++++ +.|+++++|+..+|++...+.+ +.. .|.+++|||||+.||+++..... +.+-.-.++.+|++.+|++.
T Consensus 27 g~~~~~-~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~~la~~~~~~~~-~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 27 QEYLHQ-SADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQFVYLESDYSKL-WRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp SEEEEE-CTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSSEEEEEEEEEEC-SSSCEEEEEEEEETTTTEEC
T ss_pred CeEEEE-cCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCCeEEEEecCcee-EEeecceEEEEEECCCCccc
Confidence 655554 5699999999999998876654 433 38999999999999998753210 00001168999999888752
Q ss_pred cccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-C--CcE-----------------EEEEE
Q 011452 182 AGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D--KNV-----------------QEIKI 241 (485)
Q Consensus 182 ~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~--~~V-----------------~~Vaf 241 (485)
...++ . ..+..++|| |||+.||+++ |++|++||+.++++..... + ..| .+++|
T Consensus 104 ~~~~l-~----~~~~~~~~S-PDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 104 RGNEL-P----RPIQYLCWS-PVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp CSSCC-C----SSBCCEEEC-SSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred cceec-C----cccccceEC-CCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 11111 1 245689998 8999999986 8899999999988654322 2 123 48999
Q ss_pred cCCceEEEEEcCCC--------------------------------CeeEEEEecCCCeEE--------EEeecCCccee
Q 011452 242 SPGIMLLIFTKASG--------------------------------HVPLKILSIEDGTVL--------KSFNHLLHRNK 281 (485)
Q Consensus 242 Spg~~ll~sss~~~--------------------------------D~tIklWdi~tG~~L--------~tl~~~~~~~~ 281 (485)
||++..+++++.+. ..+|++||+.+|+++ ..+.+|.+.+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE
Confidence 99776666654321 238999999998863 22446777888
Q ss_pred EEEEEecCCCEEEEE-e--CC--CcEEEEE----CCCCeeEEec----ccCCCceE-----EEEEcCCCcEEEE--Ee-C
Q 011452 282 KVDFIEQFNEKLLVK-Q--EN--ENLQILD----VRNFELTEVS----RTEFMTPS-----AFIFLYENQLFLT--FR-N 340 (485)
Q Consensus 282 ~V~f~~~~~~~lls~-s--~D--~tIkIWD----v~tg~~~~~l----~gh~~~v~-----avaFspdg~llaS--~s-D 340 (485)
.++|+ || +++++. . .+ ..|.+|| +.++++..++ .+|..++. .++|+|||+.|+. +. +
T Consensus 257 ~~~~S-pD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 257 WLTWV-TD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEES-SS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EeEEe-CC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 99997 66 456554 2 22 3488899 9999988877 57888777 8899999996543 43 5
Q ss_pred C--cEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC--Ce-EEEEec
Q 011452 341 R--TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILT--GK-CLAKIR 415 (485)
Q Consensus 341 ~--TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T--Gk-~l~tl~ 415 (485)
+ .|.+||+.+.....|..+... |..+.++ ||+.|+..+.+. +..+++++||.+.. |+ ....|.
T Consensus 335 g~~~l~~~~~~~~~~~~lt~~~~~-----v~~~~~~-d~~~i~~~~~~~------~~~~~~~~l~~~~~~~g~~~~~~l~ 402 (719)
T 1z68_A 335 GYKHIHYIKDTVENAIQITSGKWE-----AINIFRV-TQDSLFYSSNEF------EEYPGRRNIYRISIGSYPPSKKCVT 402 (719)
T ss_dssp SCEEEEEESSCSTTCEECSCSSSC-----EEEEEEE-CSSEEEEEESCG------GGCTTCBEEEEEECSSSSCCEEESS
T ss_pred CceEEEEEECCCCceEecccCceE-----EEEEEEE-eCCEEEEEEecC------CCCCceEEEEEEeCCCCCCCceecc
Confidence 5 677778874436677765433 7888888 888888776400 01148899998754 42 123332
Q ss_pred C----CCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEE-EecCC--CcEEEcc
Q 011452 416 A----SNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIY-TGNRH--GLVHVWS 484 (485)
Q Consensus 416 g----H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~La-Sgs~D--gtVklWd 484 (485)
. |. ..+..+.|||||+.|+ +++.+ .++.+||
T Consensus 403 ~~~~~~~--------------------------------------~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 403 CHLRKER--------------------------------------CQYYTASFSDYAKYYALVCYGPGIPISTLHD 440 (719)
T ss_dssp TTTTTTT--------------------------------------BCBEEEEECGGGSSEEEEECCBSSCEEEEEC
T ss_pred CccCCCC--------------------------------------CceEEEEECCCCCEEEEEcCCCCCCeEEEEE
Confidence 2 32 2678899999999877 44444 4677776
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=6.7e-27 Score=217.72 Aligned_cols=257 Identities=11% Similarity=0.039 Sum_probs=190.8
Q ss_pred eEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC-CeEEEEEcC---CcEEEEEEcC
Q 011452 168 RSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-YTMLYSISD---KNVQEIKISP 243 (485)
Q Consensus 168 ~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~-g~~l~tl~~---~~V~~VafSp 243 (485)
.++.+|++..|+.. .++.+ ...+..++|+ |||++|++++ |+.|++||+.+ ++....... ..|.+++|||
T Consensus 22 ~~i~~~d~~~~~~~---~~~~~--~~~v~~~~~s-pdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 22 SSIEIFNIRTRKMR---VVWQT--PELFEAPNWS-PDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp EEEEEEETTTTEEE---EEEEE--SSCCEEEEEC-TTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred eeEEEEeCCCCcee---eeccC--CcceEeeEEC-CCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 69999999888762 24443 4567799998 8999999987 88999999999 887655532 4688999999
Q ss_pred CceEEEEEcCCCCeeEEE--EecCCCeEEEEeecCCcceeEEEEEecCCCEEE-EEeCCCcEEEEEC--CCCeeEEeccc
Q 011452 244 GIMLLIFTKASGHVPLKI--LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLL-VKQENENLQILDV--RNFELTEVSRT 318 (485)
Q Consensus 244 g~~ll~sss~~~D~tIkl--Wdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~ll-s~s~D~tIkIWDv--~tg~~~~~l~g 318 (485)
++.++++...+.+..++| |++.+++ .+.+..+ ..+..++|+ |++..|+ +++.|++++||++ .+++. ..+..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~s-pdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 170 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWS-PDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTH 170 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEEC-TTSSEEEEEEEETTEEEEEEEETTTCCE-EECCC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEEC-CCCCEEEEEECCCCceEEEEEECCCCcc-eEccc
Confidence 777666666333344455 4556665 5556544 347788886 7788888 4679999999995 44554 55667
Q ss_pred CCCceEEEEEcCCCcEEEEEe--CCcEEEEeC--CCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCc
Q 011452 319 EFMTPSAFIFLYENQLFLTFR--NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAE 394 (485)
Q Consensus 319 h~~~v~avaFspdg~llaS~s--D~TIklWd~--~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~ 394 (485)
|...+..++|+|||+.|+.++ |++++||++ .++.+..+..|... +..++|+|||++|+.++.+........
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG-----DWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE-----EEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc-----cCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 888999999999999877554 899999998 47788889888755 899999999999999886210000000
Q ss_pred CCCCeEEEEeCCCCeE--EEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEE
Q 011452 395 GNAGSINISNILTGKC--LAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIY 472 (485)
Q Consensus 395 ~~DgtIklWdl~TGk~--l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~La 472 (485)
..++.|.+||+.+++. +..+.+|.. .|..++|+|||+.|+
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~spdg~~l~ 287 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQG--------------------------------------TMNSPNWSPDGDEFA 287 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTT--------------------------------------TSCSCCBCTTSSEEE
T ss_pred cCceEEEEEecCCCCceeeeccCCCCc--------------------------------------ccccceECCCCCEEE
Confidence 0126799999998865 555557752 677899999999999
Q ss_pred EecCCC
Q 011452 473 TGNRHG 478 (485)
Q Consensus 473 Sgs~Dg 478 (485)
+++.|.
T Consensus 288 ~~~~~~ 293 (297)
T 2ojh_A 288 YVRYFP 293 (297)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 988764
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=4.5e-27 Score=248.40 Aligned_cols=279 Identities=13% Similarity=0.030 Sum_probs=202.8
Q ss_pred ccceEEEEEe--cCEEEEEeC-CCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 95 RSKIIEIVAA--RDIVFALAQ-SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 95 ~s~V~~i~~s--~~~ias~s~-dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
..+|..|+|+ |++||.++. ||+++||++++|+.. .+...+...|++++|||| +.|++++.+++++ ..+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~-------~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAE-------QHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSC-------CEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCc-------ceE
Confidence 3357777777 999999887 999999999766654 466545468999999999 6666654323333 456
Q ss_pred EeEec---cCCcCcccceeeeccccCceEEEEeCCCC--eEEEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCce
Q 011452 172 IEYIR---RGKPDAGFALFESESLKWPGFVEFDDVNG--KVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIM 246 (485)
Q Consensus 172 lw~i~---~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG--~~Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ 246 (485)
||.+. .|+. ..+.... .....+|+ ||| .++++++.|+++ |||++++++........ .+++|||+|+
T Consensus 92 l~~~~~~~~g~~---~~l~~~~---~~~~~~~s-~dg~~~~~~s~~~~~~~-l~d~~~g~~~~l~~~~~-~~~~~spDG~ 162 (582)
T 3o4h_A 92 LFKVNTSRPGEE---QRLEAVK---PMRILSGV-DTGEAVVFTGATEDRVA-LYALDGGGLRELARLPG-FGFVSDIRGD 162 (582)
T ss_dssp EEEEETTSTTCC---EECTTSC---SBEEEEEE-ECSSCEEEEEECSSCEE-EEEEETTEEEEEEEESS-CEEEEEEETT
T ss_pred EEEEeccCCCcc---ccccCCC---CceeeeeC-CCCCeEEEEecCCCCce-EEEccCCcEEEeecCCC-ceEEECCCCC
Confidence 66553 3432 1122111 12244555 455 577777777766 99999998655443333 8999999776
Q ss_pred EEEEEcCC--CCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCC--cEEEEECCCCeeEEecccCCCc
Q 011452 247 LLIFTKAS--GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENE--NLQILDVRNFELTEVSRTEFMT 322 (485)
Q Consensus 247 ll~sss~~--~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~--tIkIWDv~tg~~~~~l~gh~~~ 322 (485)
.+++++.+ ...+|++||+++|++. ++.+|...+..++|+ |||..|+++..|+ +|.+||+.++++. ++.+|...
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~ 239 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASIS-PGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKD 239 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEEC-TTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSH
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceEC-CCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcC
Confidence 66644432 2278999999998865 778888888999997 7888888777888 9999999999988 88889888
Q ss_pred eEEEE--------EcCCCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCC
Q 011452 323 PSAFI--------FLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLA 393 (485)
Q Consensus 323 v~ava--------Fspdg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~ 393 (485)
+.+++ |+|||+++++++ |++++||++ |+++.++. .. |.+++|+ ||+++++++.+
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-g~~~~~~~---~~-----v~~~~~s-dg~~l~~~s~~------- 302 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID-GERVEAPQ---GN-----HGRVVLW-RGKLVTSHTSL------- 302 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-TEEECCCS---SE-----EEEEEEE-TTEEEEEEEET-------
T ss_pred hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-CCeeccCC---Cc-----eEEEEec-CCEEEEEEcCC-------
Confidence 88888 999999999999 999999999 98776433 22 8899999 99999998862
Q ss_pred cCCCCeEEEEeCCCCeEEEEe
Q 011452 394 EGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 394 ~~~DgtIklWdl~TGk~l~tl 414 (485)
..-..|.+||+.+ .+..|
T Consensus 303 -~~p~~l~~~d~~~--~~~~l 320 (582)
T 3o4h_A 303 -STPPRIVSLPSGE--PLLEG 320 (582)
T ss_dssp -TEEEEEEEETTCC--EEECC
T ss_pred -CCCCeEEEEcCCC--ceEEE
Confidence 1113477777653 44444
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=3e-26 Score=219.42 Aligned_cols=252 Identities=10% Similarity=0.089 Sum_probs=191.2
Q ss_pred eEEEEeEeccCCcCcccceeeecccc-CceEEEEeCCCCeE-EEEeeCCCcEEEeecCCCeEEEEEc-CC------cEEE
Q 011452 168 RSTRIEYIRRGKPDAGFALFESESLK-WPGFVEFDDVNGKV-LTYSAQDSIYKVFDLKNYTMLYSIS-DK------NVQE 238 (485)
Q Consensus 168 ~t~~lw~i~~G~~~~~~~lf~~~~~~-~~~~V~Fs~pnG~~-Las~s~D~tiKlWdl~~g~~l~tl~-~~------~V~~ 238 (485)
.++.+||+.+|++.. .+...... .+..++|+ |||+. +++++.+++|.+||+.+++.+.++. .. .+..
T Consensus 11 ~~v~~~d~~~~~~~~---~~~~~~~~~~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (337)
T 1pby_B 11 DKLVVIDTEKMAVDK---VITIADAGPTPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG 86 (337)
T ss_dssp TEEEEEETTTTEEEE---EEECTTCTTCCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTC
T ss_pred CeEEEEECCCCcEEE---EEEcCCCCCCccceEEc-CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccc
Confidence 489999998887622 22222111 36789998 78865 5667778999999999999887775 22 6778
Q ss_pred EEEcCCc-eEEEEEcC-----C----CCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECC
Q 011452 239 IKISPGI-MLLIFTKA-----S----GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR 308 (485)
Q Consensus 239 VafSpg~-~ll~sss~-----~----~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~ 308 (485)
++|||++ .++++... + .+..|.+||+++|+.+..+.. ......++|+ |++.+|+++ ++.|.+||+.
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s-~dg~~l~~~--~~~i~~~d~~ 162 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWA-RDGSKLYGL--GRDLHVMDPE 162 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEEC-TTSSCEEEE--SSSEEEEETT
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEEC-CCCCEEEEe--CCeEEEEECC
Confidence 9999877 44444210 0 347999999999999988874 3456788886 777778877 7899999999
Q ss_pred CCeeEEecccCCCceEEEEEcCCCcEEEEEe--CC-----------------------cEEEEeCC-CcEE-EEeecCCC
Q 011452 309 NFELTEVSRTEFMTPSAFIFLYENQLFLTFR--NR-----------------------TVAVWNFR-GELV-TSFEDHLL 361 (485)
Q Consensus 309 tg~~~~~l~gh~~~v~avaFspdg~llaS~s--D~-----------------------TIklWd~~-G~ll-~tl~gH~~ 361 (485)
+++++..+..+.. ...++|+|||+.|+... ++ +|.+||++ |++. ..+..|..
T Consensus 163 ~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 241 (337)
T 1pby_B 163 AGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241 (337)
T ss_dssp TTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSS
T ss_pred CCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCC
Confidence 9998877754431 11337899999765544 33 46899996 7764 33445543
Q ss_pred CCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccc
Q 011452 362 WHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKK 441 (485)
Q Consensus 362 ~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~ 441 (485)
. +.+++|+|||++|+.+ +++|.+||+.+++.+..+..+.
T Consensus 242 ~-----~~~~~~s~dg~~l~~~-------------~~~v~~~d~~~~~~~~~~~~~~----------------------- 280 (337)
T 1pby_B 242 F-----YFSTAVNPAKTRAFGA-------------YNVLESFDLEKNASIKRVPLPH----------------------- 280 (337)
T ss_dssp C-----EEEEEECTTSSEEEEE-------------ESEEEEEETTTTEEEEEEECSS-----------------------
T ss_pred c-----eeeEEECCCCCEEEEe-------------CCeEEEEECCCCcCcceecCCC-----------------------
Confidence 3 7899999999999987 2899999999999999887543
Q ss_pred cccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 442 HSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 442 ~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.+.+++|+|||+.|++++.|+.|++||.
T Consensus 281 ----------------~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 281 ----------------SYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp ----------------CCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred ----------------ceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 5678999999999999999999999984
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.7e-25 Score=214.66 Aligned_cols=260 Identities=11% Similarity=0.093 Sum_probs=184.1
Q ss_pred eEEEEeEec-cCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC-CcEEEeecC--CCe--EEEEEc-CCcEEEEE
Q 011452 168 RSTRIEYIR-RGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-SIYKVFDLK--NYT--MLYSIS-DKNVQEIK 240 (485)
Q Consensus 168 ~t~~lw~i~-~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D-~tiKlWdl~--~g~--~l~tl~-~~~V~~Va 240 (485)
+++.+|++. .|++. .+....+...+..++|+ |+|++|++++.+ ++|++|++. +++ .+..+. ...+..++
T Consensus 15 ~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (343)
T 1ri6_A 15 QQIHVWNLNHEGALT---LTQVVDVPGQVQPMVVS-PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHIS 90 (343)
T ss_dssp TEEEEEEECTTSCEE---EEEEEECSSCCCCEEEC-TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEE
T ss_pred CeEEEEEECCCCcEE---EeeeEecCCCCceEEEC-CCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEE
Confidence 589999984 45431 11112233456789998 799988888876 999999998 666 344554 34789999
Q ss_pred EcCCce-EEEEEcCCCCeeEEEEec---CCCeEEEEeecCCcceeEEEEEecCCCEEEEEe-CCCcEEEEECCC-CeeEE
Q 011452 241 ISPGIM-LLIFTKASGHVPLKILSI---EDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRN-FELTE 314 (485)
Q Consensus 241 fSpg~~-ll~sss~~~D~tIklWdi---~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~t-g~~~~ 314 (485)
|+|++. +++++. .+++|++||+ .+++.+..+.++ ..+..++|+ |++..+++++ .|++|++||+.+ ++...
T Consensus 91 ~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 91 TDHQGQFVFVGSY--NAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANIS-PDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp ECTTSSEEEEEET--TTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEEC-TTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred EcCCCCEEEEEec--CCCeEEEEECCCCccccccccccCC-CCceEEEEC-CCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 998666 444433 3479999999 555666777654 457789986 7788888886 899999999998 76542
Q ss_pred ----ecc-cCCCceEEEEEcCCCcEE-EEEe-CCcEEEEeCC---CcE--EEEeecCCC-CCCCCCeeEEEECCCCCEEE
Q 011452 315 ----VSR-TEFMTPSAFIFLYENQLF-LTFR-NRTVAVWNFR---GEL--VTSFEDHLL-WHPDCNTNNIYITSDQDLII 381 (485)
Q Consensus 315 ----~l~-gh~~~v~avaFspdg~ll-aS~s-D~TIklWd~~---G~l--l~tl~gH~~-~~~~~~v~svafSpDG~~La 381 (485)
... .....+..++|+|||++| +++. +++|++||++ |++ +..+..... ......+..++|+|||++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 222 234578999999999965 4554 9999999993 543 333331110 00011267899999999887
Q ss_pred EEecCCCCCCCCcCCCCeEEEEeCC--C--CeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccC
Q 011452 382 SYCKADSDDPLAEGNAGSINISNIL--T--GKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALE 457 (485)
Q Consensus 382 S~s~d~~~d~~~~~~DgtIklWdl~--T--Gk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 457 (485)
.++. .|++|++||+. + .+.+..+..+.
T Consensus 247 v~~~----------~~~~i~v~d~~~~~~~~~~~~~~~~~~--------------------------------------- 277 (343)
T 1ri6_A 247 ACDR----------TASLITVFSVSEDGSVLSKEGFQPTET--------------------------------------- 277 (343)
T ss_dssp EEET----------TTTEEEEEEECTTSCCEEEEEEEECSS---------------------------------------
T ss_pred EEec----------CCCEEEEEEEcCCCCceEEeeeecCCC---------------------------------------
Confidence 5543 27999999998 3 35666665543
Q ss_pred CeEEEEEcCCCCEEEEec-CCCcEEEcc
Q 011452 458 DITALFYDEDRNEIYTGN-RHGLVHVWS 484 (485)
Q Consensus 458 ~V~sl~fspDg~~LaSgs-~DgtVklWd 484 (485)
.+.+++|+|||+.|+.++ .|+.|+||+
T Consensus 278 ~~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 278 QPRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp SCCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred ccceEEECCCCCEEEEecCCCCeEEEEE
Confidence 467899999999888888 689999995
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1.1e-25 Score=241.83 Aligned_cols=286 Identities=12% Similarity=0.104 Sum_probs=203.3
Q ss_pred cceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeE
Q 011452 96 SKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEY 174 (485)
Q Consensus 96 s~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~ 174 (485)
..|..++|+ ...|+.. .++++++||+.+|++.. +.. +...+.+++|||||+.||++. + .++.+|+
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~-l~~-~~~~~~~~~~SpdG~~la~~~----~-------~~i~v~~ 147 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTY-LFD-TNEETASLDFSPVGDRVAYVR----N-------HNLYIAR 147 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEE-EEC-CTTCCTTCEECTTSSEEEEEE----T-------TEEEEEE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEE-ccC-CcccccCCcCCCCCCEEEEEE----C-------CeEEEEe
Confidence 346677777 3334433 46999999999887765 433 455689999999999998843 2 4899999
Q ss_pred ecc-----CCcCcccceeeec-------------cccCceEEEEeCCCCeEEEEee------------------------
Q 011452 175 IRR-----GKPDAGFALFESE-------------SLKWPGFVEFDDVNGKVLTYSA------------------------ 212 (485)
Q Consensus 175 i~~-----G~~~~~~~lf~~~-------------~~~~~~~V~Fs~pnG~~Las~s------------------------ 212 (485)
+.. |+.. .+.... ...++..++|| |||+.|++++
T Consensus 148 ~~~~~~~~g~~~---~~~~~~~~~~~~g~~~~~ee~~~~~~~~~S-pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 148 GGKLGEGMSRAI---AVTIDGTETLVYGQAVHQREFGIEKGTFWS-PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp CBCTTSCCCCCE---ESCSCCBTTEEESSCCGGGCTTCCCSEEEC-TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred cCcccccCCCcE---EeccCCCCCeEcccchhhhhcCCCceEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 987 7752 122111 11234689998 8999999998
Q ss_pred ---------CCCcEEEeecCCCeEEEEEc----CCcEEEEEEcCCceEEEEEcCC---CCeeEEEEecCCCeEEEEee--
Q 011452 213 ---------QDSIYKVFDLKNYTMLYSIS----DKNVQEIKISPGIMLLIFTKAS---GHVPLKILSIEDGTVLKSFN-- 274 (485)
Q Consensus 213 ---------~D~tiKlWdl~~g~~l~tl~----~~~V~~VafSpg~~ll~sss~~---~D~tIklWdi~tG~~L~tl~-- 274 (485)
.+.+|++||+++++...... ...|..++|||++..+++++.+ .+.+|++||+++|+.++.+.
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~ 303 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE 303 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred eCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc
Confidence 45789999999998654432 3569999999977655443322 22599999999995544443
Q ss_pred cCCcc---eeEEEEEec--CCCEEEEEeCCCcEEEEECC-CCeeEEecccCCCceEE-EEEcCCCcEEEEEe--CC----
Q 011452 275 HLLHR---NKKVDFIEQ--FNEKLLVKQENENLQILDVR-NFELTEVSRTEFMTPSA-FIFLYENQLFLTFR--NR---- 341 (485)
Q Consensus 275 ~~~~~---~~~V~f~~~--~~~~lls~s~D~tIkIWDv~-tg~~~~~l~gh~~~v~a-vaFspdg~llaS~s--D~---- 341 (485)
.+... +..++|+ | ++..+++++.|++++||++. +++.++.+.+|...+.. ++|+|||+.|+.++ ++
T Consensus 304 ~~~~~~~~~~~~~~s-p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~ 382 (706)
T 2z3z_A 304 TDKHYVEPLHPLTFL-PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLER 382 (706)
T ss_dssp ECSSCCCCCSCCEEC-TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCB
T ss_pred cCCCeECccCCceee-cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceE
Confidence 22221 2568896 6 67766667899999999887 67788888888877877 79999998876655 44
Q ss_pred cEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 342 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 342 TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
.|..||+++..++.+. |... +.+++|||||++|+..+.+ ....+.|.+||+.+++ +..+
T Consensus 383 ~l~~~d~~~~~~~~l~-~~~~-----~~~~~~spdg~~l~~~~~~-------~~~p~~i~l~d~~~~~-~~~~ 441 (706)
T 2z3z_A 383 HFYCIDIKGGKTKDLT-PESG-----MHRTQLSPDGSAIIDIFQS-------PTVPRKVTVTNIGKGS-HTLL 441 (706)
T ss_dssp EEEEEETTCCCCEESC-CSSS-----EEEEEECTTSSEEEEEEEC-------SSCSCEEEEEESSSCE-EEEE
T ss_pred EEEEEEcCCCCceecc-CCCc-----eEEEEECCCCCEEEEEecC-------CCCCcEEEEEECCCCe-Eeec
Confidence 5666677643355555 4433 8999999999999887652 1123679999999988 4444
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=3.4e-26 Score=212.98 Aligned_cols=249 Identities=12% Similarity=0.002 Sum_probs=189.5
Q ss_pred EEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEecc-CCcCcccceee
Q 011452 110 ALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRR-GKPDAGFALFE 188 (485)
Q Consensus 110 s~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~-G~~~~~~~lf~ 188 (485)
+.+.|+++++||..+|+... +.. |...|.+++|+|||+.|++++ + ..+.+|++.. |++. .++.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~-~~~~v~~~~~spdg~~l~~~~----~-------~~i~~~d~~~~~~~~---~~~~ 80 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQ-TPELFEAPNWSPDGKYLLLNS----E-------GLLYRLSLAGDPSPE---KVDT 80 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEE-ESSCCEEEEECTTSSEEEEEE----T-------TEEEEEESSSCCSCE---ECCC
T ss_pred CCCcceeEEEEeCCCCceee-ecc-CCcceEeeEECCCCCEEEEEc----C-------CeEEEEeCCCCCCce---Eecc
Confidence 45789999999999888765 444 677899999999999998854 3 3899999988 7762 2332
Q ss_pred eccccCceEEEEeCCCCeEEEEee--CCCcEEEeec--CCCeEEEEEc-CCcEEEEEEcCCceEEE-EEcCCCCeeEEEE
Q 011452 189 SESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDL--KNYTMLYSIS-DKNVQEIKISPGIMLLI-FTKASGHVPLKIL 262 (485)
Q Consensus 189 ~~~~~~~~~V~Fs~pnG~~Las~s--~D~tiKlWdl--~~g~~l~tl~-~~~V~~VafSpg~~ll~-sss~~~D~tIklW 262 (485)
......+..++|+ |||+.|++++ .|+.++||.+ .+++ ...+. ...+..++|||++..++ ++.. |++++||
T Consensus 81 ~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~~~l~ 156 (297)
T 2ojh_A 81 GFATICNNDHGIS-PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIR--DQVFDIY 156 (297)
T ss_dssp TTCCCBCSCCEEC-TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEE--TTEEEEE
T ss_pred ccccccccceEEC-CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECC--CCceEEE
Confidence 2222345578998 7999999998 4466777765 4554 34443 45699999998666444 4433 3688999
Q ss_pred ec--CCCeEEEEeecCCcceeEEEEEecCCCEEEEEe-CCCcEEEEECC-CCeeEEecccCCCceEEEEEcCCCcEEEEE
Q 011452 263 SI--EDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-NFELTEVSRTEFMTPSAFIFLYENQLFLTF 338 (485)
Q Consensus 263 di--~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~-tg~~~~~l~gh~~~v~avaFspdg~llaS~ 338 (485)
++ .+++ ...+..|...+..++|+ |++..|++++ .|++++||++. .+..+..+..|...+..++|+|||++|+.+
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 157 SMDIDSGV-ETRLTHGEGRNDGPDYS-PDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp EEETTTCC-EEECCCSSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEE
T ss_pred EEECCCCc-ceEcccCCCccccceEC-CCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEE
Confidence 84 4554 45666677788899996 7788888775 69999999986 566677788888899999999999999988
Q ss_pred e-C-----------CcEEEEeCC-CcE--EEEeecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 339 R-N-----------RTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 339 s-D-----------~TIklWd~~-G~l--l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
+ | ..|.+||++ +++ +..+.+|... +..++|+|||++|++++.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGT-----MNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTT-----SCSCCBCTTSSEEEEEEE
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcc-----cccceECCCCCEEEEEEe
Confidence 7 6 569999996 665 5556688766 888999999999999987
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=6.8e-25 Score=214.85 Aligned_cols=270 Identities=10% Similarity=0.109 Sum_probs=188.8
Q ss_pred CCCeEEeeecc--cCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceee-e
Q 011452 113 QSGVCAAFCRE--TNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFE-S 189 (485)
Q Consensus 113 ~dgtiklW~~~--tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~-~ 189 (485)
.++.+.+|.++ +|+....-...+......|+|+|||+ |++++..+ .+ ..+.+|++..|++.. +-. .
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~-~~------~~v~~~~~~~g~~~~---~~~~~ 82 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKED-DE------GGIAAWQIDGQTAHK---LNTVV 82 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEET-TE------EEEEEEEEETTEEEE---EEEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecC-CC------ceEEEEEecCCcEEE---eeeee
Confidence 35667777654 56654311122344578899999999 77666432 23 689999997776421 111 1
Q ss_pred ccccCceEEEEeCCCCeEEEEee-CCCcEEEeecC-CCe--EEEEEcC-----------CcEEEEEEcCCceEEEEEcCC
Q 011452 190 ESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLK-NYT--MLYSISD-----------KNVQEIKISPGIMLLIFTKAS 254 (485)
Q Consensus 190 ~~~~~~~~V~Fs~pnG~~Las~s-~D~tiKlWdl~-~g~--~l~tl~~-----------~~V~~VafSpg~~ll~sss~~ 254 (485)
.....|..|+|+ |||++|++++ .|++|++||+. +|+ .+..+.. ..+..++|||++.++++...
T Consensus 83 ~~~~~p~~~a~s-pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~- 160 (347)
T 3hfq_A 83 APGTPPAYVAVD-EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG- 160 (347)
T ss_dssp EESCCCSEEEEE-TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-
T ss_pred cCCCCCEEEEEC-CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-
Confidence 234567799998 7999888777 78999999995 444 3444421 24889999997776666443
Q ss_pred CCeeEEEEecC-CCeEEE--EeecCC-cceeEEEEEecCCCEEEEE-eCCCcEEEEECCC--CeeE--EecccCC-----
Q 011452 255 GHVPLKILSIE-DGTVLK--SFNHLL-HRNKKVDFIEQFNEKLLVK-QENENLQILDVRN--FELT--EVSRTEF----- 320 (485)
Q Consensus 255 ~D~tIklWdi~-tG~~L~--tl~~~~-~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~t--g~~~--~~l~gh~----- 320 (485)
+.+|++|++. +|++.. .+..+. .....++|+ |++.++++. ..+++|++||+.. +++. ..+....
T Consensus 161 -~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 161 -SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS-PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp -TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred -CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 4799999998 676543 223222 245678996 778777775 5889999999884 6542 2222222
Q ss_pred -CceEEEEEcCCCcEE-EEEe-CCcEEEEeCC--C--cEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCC
Q 011452 321 -MTPSAFIFLYENQLF-LTFR-NRTVAVWNFR--G--ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLA 393 (485)
Q Consensus 321 -~~v~avaFspdg~ll-aS~s-D~TIklWd~~--G--~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~ 393 (485)
..+..++|+|||++| ++.. +++|.+|+++ | +.+.++..|... +..++|+|||++|++++.+
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~-----~~~~~~spdg~~l~v~~~~------- 306 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDF-----PRDFDLDPTEAFVVVVNQN------- 306 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSC-----CCEEEECTTSSEEEEEETT-------
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCC-----cCeEEECCCCCEEEEEEcC-------
Confidence 458999999999966 6666 9999999985 5 456677776555 7899999999999988762
Q ss_pred cCCCCeEEEE--eCCCCeEEE
Q 011452 394 EGNAGSINIS--NILTGKCLA 412 (485)
Q Consensus 394 ~~~DgtIklW--dl~TGk~l~ 412 (485)
+++|.|| |..+|+...
T Consensus 307 ---~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 307 ---TDNATLYARDLTSGKLSL 324 (347)
T ss_dssp ---TTEEEEEEECTTTCCEEE
T ss_pred ---CCcEEEEEEeCCCCeEEe
Confidence 6899999 667888653
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=5.4e-24 Score=206.13 Aligned_cols=264 Identities=14% Similarity=0.114 Sum_probs=203.3
Q ss_pred cceEEEEEe--cCEEEEEeC-------CCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccc
Q 011452 96 SKIIEIVAA--RDIVFALAQ-------SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLR 166 (485)
Q Consensus 96 s~V~~i~~s--~~~ias~s~-------dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~ 166 (485)
..+.+++++ ++.|++++. ++++.+||..+|+.+.++... ..+.+++|+|||+.|+.++. .+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~---~~----- 110 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNT---VN----- 110 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEET---TT-----
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEec---CC-----
Confidence 456678888 778887774 679999999999999988763 24789999999997766442 23
Q ss_pred eeEEEEeEeccCCcCcccceeeeccc--------cCceEEEEeCCCCeEEEEee--CCCcEEEeecCCCeEEEEEc--CC
Q 011452 167 CRSTRIEYIRRGKPDAGFALFESESL--------KWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSIS--DK 234 (485)
Q Consensus 167 ~~t~~lw~i~~G~~~~~~~lf~~~~~--------~~~~~V~Fs~pnG~~Las~s--~D~tiKlWdl~~g~~l~tl~--~~ 234 (485)
.++.+||+.+|+... .+..... .++..++|+ |+|+.|..++ .|++|.+||+++++.+..+. +.
T Consensus 111 -~~v~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 185 (353)
T 3vgz_A 111 -SAVTAIDAKTGEVKG---RLVLDDRKRTEEVRPLQPRELVAD-DATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK 185 (353)
T ss_dssp -TEEEEEETTTCCEEE---EEESCCCCCCSSCCCCEEEEEEEE-TTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT
T ss_pred -CEEEEEeCCCCeeEE---EEecCCCccccccCCCCCceEEEC-CCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC
Confidence 489999998888632 2221110 125679998 7888666554 58999999999999998886 45
Q ss_pred cEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeec----CCcceeEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q 011452 235 NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH----LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRN 309 (485)
Q Consensus 235 ~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~----~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~t 309 (485)
.+..++|+|++..+..+. .++.|.+||+++|+.+.++.. +.+....++|+ |++..+++++ .++.|.+||+.+
T Consensus 186 ~~~~~~~s~dg~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTN--ADGELITIDTADNKILSRKKLLDDGKEHFFINISLD-TARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp TCCCCEEETTTTEEEEEC--TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE-TTTTEEEEEESSSSEEEEEETTT
T ss_pred ccceEEECCCCCEEEEEc--CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC-CCCCEEEEEeCCCCEEEEEECCC
Confidence 689999998665444433 357999999999999998874 44556689997 6788888775 669999999999
Q ss_pred CeeEEecccCCCceEEEEEcCCCc-EEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 310 FELTEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 310 g~~~~~l~gh~~~v~avaFspdg~-llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
++.+..+..+. ...++|+|||+ ++++.. +++|.+||.. ++.+.++..+. . +.+++|+|||++|+.++.
T Consensus 263 ~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~-----~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 263 GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-H-----PNSLALSADGKTLYVSVK 333 (353)
T ss_dssp CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-E-----EEEEEECTTSCEEEEEEE
T ss_pred CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-C-----CCeEEEcCCCCEEEEEEc
Confidence 99888776443 46799999998 556665 9999999996 99998887654 2 789999999997777665
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=1.5e-24 Score=212.51 Aligned_cols=262 Identities=10% Similarity=0.129 Sum_probs=175.8
Q ss_pred eEEEEeEe--ccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeC--CCcEEEeecCCCe--EEEEE--cCCcEEEE
Q 011452 168 RSTRIEYI--RRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYT--MLYSI--SDKNVQEI 239 (485)
Q Consensus 168 ~t~~lw~i--~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~--D~tiKlWdl~~g~--~l~tl--~~~~V~~V 239 (485)
+.+.+|.+ .+|++.. +-.......|..++|+ |||++++++.. |++|++||+.+++ .+.++ ++..+..|
T Consensus 16 ~~i~v~~~d~~tg~~~~---~~~~~~~~~p~~~a~s-pdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTN---DGLLAATQNPTYLALS-AKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp CEEEEEEEETTTTEEEE---EEEEEECSCCCCEEEC-TTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred CCEEEEEEcCCCCeEEE---eeeeeccCCcceEEEc-cCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 56677766 3455421 1111234567789998 79995444432 7999999998887 34443 35678899
Q ss_pred EEcCCceEEEEEcCCCCeeEEEEecC-CCe--EEEEeecC---------CcceeEEEEEecCCCEEEEE-eCCCcEEEEE
Q 011452 240 KISPGIMLLIFTKASGHVPLKILSIE-DGT--VLKSFNHL---------LHRNKKVDFIEQFNEKLLVK-QENENLQILD 306 (485)
Q Consensus 240 afSpg~~ll~sss~~~D~tIklWdi~-tG~--~L~tl~~~---------~~~~~~V~f~~~~~~~lls~-s~D~tIkIWD 306 (485)
+|||++.++..++. .+++|++|++. +|+ .+..+... ..++..++|+ |++. ++++ ..+++|++||
T Consensus 92 a~spdg~~l~~~~~-~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~s-pdg~-l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 92 AVDEARQLVYSANY-HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLT-PDNR-LAVIDLGSDKVYVYN 168 (347)
T ss_dssp EEETTTTEEEEEET-TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEEC-TTSC-EEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeC-CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEEC-CCCc-EEEEeCCCCEEEEEE
Confidence 99997664444332 34799999995 443 34444321 1236679996 6777 5555 5789999999
Q ss_pred CC-CCeeEEe--ccc-CCCceEEEEEcCCCcEEEE-Ee-CCcEEEEeCC---CcE--EEEeecCCC-CCCCCCeeEEEEC
Q 011452 307 VR-NFELTEV--SRT-EFMTPSAFIFLYENQLFLT-FR-NRTVAVWNFR---GEL--VTSFEDHLL-WHPDCNTNNIYIT 374 (485)
Q Consensus 307 v~-tg~~~~~--l~g-h~~~v~avaFspdg~llaS-~s-D~TIklWd~~---G~l--l~tl~gH~~-~~~~~~v~svafS 374 (485)
+. ++++... +.. ....+..++|+|||++|+. .. +++|.+|+++ |++ +..+..+.. +.....+..++||
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 99 6765432 122 2337889999999995554 45 8999999985 553 334433321 0001227889999
Q ss_pred CCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC-CC--eEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccc
Q 011452 375 SDQDLIISYCKADSDDPLAEGNAGSINISNIL-TG--KCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRST 451 (485)
Q Consensus 375 pDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~-TG--k~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (485)
|||++|+.++. .+++|.+||+. +| +.+.++..|..
T Consensus 249 pdG~~l~v~~~----------~~~~v~v~~~~~~g~~~~~~~~~~~~~-------------------------------- 286 (347)
T 3hfq_A 249 HDGHFLYVSNR----------GYNTLAVFAVTADGHLTLIQQISTEGD-------------------------------- 286 (347)
T ss_dssp TTSCEEEEEEE----------TTTEEEEEEECGGGCEEEEEEEECSSS--------------------------------
T ss_pred CCCCEEEEEeC----------CCCEEEEEEECCCCcEEEeEEEecCCC--------------------------------
Confidence 99998854443 16999999997 33 66677766541
Q ss_pred hhcccCCeEEEEEcCCCCEEEEecCC-CcEEEcc
Q 011452 452 VAEALEDITALFYDEDRNEIYTGNRH-GLVHVWS 484 (485)
Q Consensus 452 ~~~~l~~V~sl~fspDg~~LaSgs~D-gtVklWd 484 (485)
.+.+++|+|||+.||+++.+ ++|.||+
T Consensus 287 ------~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 287 ------FPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp ------CCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ------CcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 57789999999999888765 9999994
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.94 E-value=1.4e-24 Score=214.46 Aligned_cols=320 Identities=10% Similarity=0.022 Sum_probs=205.7
Q ss_pred EeeecccCcEEEEeecCCcccEEE-----EEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccc
Q 011452 118 AAFCRETNQRICFLNVTADEVIRS-----LFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESL 192 (485)
Q Consensus 118 klW~~~tG~~l~tl~g~~~~~i~s-----v~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~ 192 (485)
..++..+|..+..|.. +.....+ .+|||||+.||.++.... . ..+.+|++..|++. ++... +.
T Consensus 13 ~~~~~~~g~~~~~lt~-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g-~------~~l~~~d~~~g~~~---~lt~~-~~ 80 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTP-PDVTCHRNYFYQKCFTRDGSKLLFGGAFDG-P------WNYYLLDLNTQVAT---QLTEG-RG 80 (388)
T ss_dssp EEECTTTCCEEEECSC-TTSCEECCCTTSCCBCTTSCEEEEEECTTS-S------CEEEEEETTTCEEE---ECCCS-SC
T ss_pred EEecCCCCcceEEecC-CcccccchhhcCccCCCCCCEEEEEEcCCC-C------ceEEEEeCCCCceE---EeeeC-CC
Confidence 3456778988888876 4445566 889999999999874211 1 25777888777752 23322 22
Q ss_pred cCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEE--EEEcCCcEEEEE--EcCCceEEEEEc----------------
Q 011452 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML--YSISDKNVQEIK--ISPGIMLLIFTK---------------- 252 (485)
Q Consensus 193 ~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l--~tl~~~~V~~Va--fSpg~~ll~sss---------------- 252 (485)
..+..++|+ |||+.|++++.|+++.+||+.+++.. +.++...+.... ++|++.+++...
T Consensus 81 ~~~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~ 159 (388)
T 3pe7_A 81 DNTFGGFLS-PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFH 159 (388)
T ss_dssp BCSSSCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHH
T ss_pred CCccceEEc-CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhh
Confidence 222356898 89999999999999999999999854 444455554443 478777665321
Q ss_pred ----CCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEec-CCCEEEEEeC------CCcEEEEECCCCeeEEecccCC-
Q 011452 253 ----ASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQ-FNEKLLVKQE------NENLQILDVRNFELTEVSRTEF- 320 (485)
Q Consensus 253 ----~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~-~~~~lls~s~------D~tIkIWDv~tg~~~~~l~gh~- 320 (485)
.+.+..|.+||+++|+..... .+...+..++|+ | ++.+|+..+. +..|.++|+.+++......++.
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~s-p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 237 (388)
T 3pe7_A 160 EFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYR-PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEG 237 (388)
T ss_dssp HHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE-TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTT
T ss_pred hhhccCCcceEEEEECCCCceEEee-cCCccccccEEC-CCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCC
Confidence 234478999999999765444 444667889997 6 7888887654 3478888888776555444332
Q ss_pred CceEEEEEcCCCcEEEEEe--CC----cEEEEeCC-Cc--EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCC
Q 011452 321 MTPSAFIFLYENQLFLTFR--NR----TVAVWNFR-GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDP 391 (485)
Q Consensus 321 ~~v~avaFspdg~llaS~s--D~----TIklWd~~-G~--ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~ 391 (485)
..+..++|||||+.|+..+ ++ +|.+||+. |+ .+..+.++.... .....++|||||++|+....+. ..
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~--~~ 313 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLM--SNYDGSLMVGDGSDAPVDVQDD--SG 313 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEE--ECTTSSEEEEEECCC-----------
T ss_pred cccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeee--ecCCCCeEccCCCcceeEeeec--cc
Confidence 3577889999999776654 22 39999996 76 455555522110 0012347999999998653200 00
Q ss_pred CCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEE
Q 011452 392 LAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEI 471 (485)
Q Consensus 392 ~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~L 471 (485)
...+.+..|.+||+.+|+. ..|..|..... .-.. .....+.+++|||||+.|
T Consensus 314 ~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~----------------~~~~-----------~~~~~~~~~~~spDg~~l 365 (388)
T 3pe7_A 314 YKIENDPFLYVFNMKNGTQ-HRVARHDTSWK----------------VFEG-----------DRQVTHPHPSFTPDDKQI 365 (388)
T ss_dssp ---CCCCEEEEEETTTTEE-EEEEECCCCCC----------------CBTT-----------BSSTTCCCCEECTTSSEE
T ss_pred cccCCCCEEEEEeccCCce-EEeccccCccc----------------cccc-----------ccccCCCCccCCCCCCEE
Confidence 0012367999999998875 55666641000 0000 000136678999999988
Q ss_pred EEec-CCCcEEEcc
Q 011452 472 YTGN-RHGLVHVWS 484 (485)
Q Consensus 472 aSgs-~DgtVklWd 484 (485)
+.++ .++..+||.
T Consensus 366 ~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 366 LFTSDVHGKPALYL 379 (388)
T ss_dssp EEEECTTSSCEEEE
T ss_pred EEEecCCCceeEEE
Confidence 8665 688888884
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=1.9e-24 Score=208.50 Aligned_cols=267 Identities=7% Similarity=-0.048 Sum_probs=194.7
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCccc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~ 184 (485)
+.++++.+.++++++||..+|+.+.++.......+.+++|+|||+.|+.++ ..+ .++.+|++.+|+...
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---~~~------~~i~~~d~~t~~~~~-- 79 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---NHY------GDIYGIDLDTCKNTF-- 79 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE---TTT------TEEEEEETTTTEEEE--
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe---CCC------CcEEEEeCCCCcEEE--
Confidence 778999999999999999999999988764323578999999999776544 233 489999988887621
Q ss_pred ceeeecc-----ccCceEEEEeCCCCeEEEEeeCC------------CcEEEeecCCCe---EEEEEc-CCcEEEEEEcC
Q 011452 185 ALFESES-----LKWPGFVEFDDVNGKVLTYSAQD------------SIYKVFDLKNYT---MLYSIS-DKNVQEIKISP 243 (485)
Q Consensus 185 ~lf~~~~-----~~~~~~V~Fs~pnG~~Las~s~D------------~tiKlWdl~~g~---~l~tl~-~~~V~~VafSp 243 (485)
.+.... ...+..++|+ |||++|+.++.| ++|.+||+++++ .+..+. ...+.+++|+|
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 80 -HANLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp -EEESCCSTTEEEECSSCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred -EEEcccccccccccccceEEC-CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 122111 1236689998 799999988865 999999999854 334443 34688999999
Q ss_pred CceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCc------------------------ceeEEEEEecCCC--------
Q 011452 244 GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH------------------------RNKKVDFIEQFNE-------- 291 (485)
Q Consensus 244 g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~------------------------~~~~V~f~~~~~~-------- 291 (485)
++.+++. + ..|++||+.+|+++.++..+.. ....++|. +++.
T Consensus 158 dg~l~~~-~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~ 231 (349)
T 1jmx_B 158 DGSLYVA-G----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF-KDDKQDPATADL 231 (349)
T ss_dssp TSCEEEE-S----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCEE
T ss_pred CCcEEEc-c----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeec-CCCcCCcccccc
Confidence 8875553 2 3499999999999998874310 11234443 1111
Q ss_pred --EEE-EEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcC-CCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCCCCC
Q 011452 292 --KLL-VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDC 366 (485)
Q Consensus 292 --~ll-s~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFsp-dg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~~~ 366 (485)
.++ ....++++++|++. .+...+.+++|+| ||++++++ +++|.+||+. ++++.++..+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~----- 296 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFA---------DLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHT----- 296 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEE---------ECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSC-----
T ss_pred ceeEEEEeccCCcEEecccc---------cCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCC-----
Confidence 011 12244555555542 3556789999999 99999988 8999999996 998888874321
Q ss_pred CeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 367 NTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 367 ~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
+..++|+|||++|++++. +++|++||+.+++++.+++.+
T Consensus 297 -~~~~~~s~dg~~l~~~~~-----------~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 297 -YYCVAFDKKGDKLYLGGT-----------FNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp -CCEEEECSSSSCEEEESB-----------SSEEEEEETTTTEEEEEEECS
T ss_pred -ccceEECCCCCEEEEecC-----------CCeEEEEeccccceeeeeecC
Confidence 578999999999988765 699999999999999998765
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=3.4e-26 Score=246.80 Aligned_cols=273 Identities=10% Similarity=0.126 Sum_probs=198.8
Q ss_pred EEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccc--cCceEEEEeCCCCeEEEEeeC----
Q 011452 140 RSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESL--KWPGFVEFDDVNGKVLTYSAQ---- 213 (485)
Q Consensus 140 ~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~--~~~~~V~Fs~pnG~~Las~s~---- 213 (485)
.++.|+|||+.+++ + .| +++++|++..|+. ..++..... ..+..++|| |||+.||+++.
T Consensus 19 ~~~~~s~dg~~~~~-~----~d------~~i~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~S-pDg~~la~~~~~~~~ 83 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-S----AD------NNIVLYNIETGQS---YTILSNRTMKSVNASNYGLS-PDRQFVYLESDYSKL 83 (719)
T ss_dssp CCCEESSSSEEEEE-C----TT------SCEEEEESSSCCE---EEEECHHHHHTTTCSEEEEC-TTSSEEEEEEEEEEC
T ss_pred CccEECCCCeEEEE-c----CC------CCEEEEEcCCCcE---EEEEccccccccceeeEEEC-CCCCeEEEEecCcee
Confidence 47899999965543 2 23 5899999988886 234443111 126689998 89999999886
Q ss_pred -----CCcEEEeecCCCeEE--EEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEe-ecCCcce-----
Q 011452 214 -----DSIYKVFDLKNYTML--YSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSF-NHLLHRN----- 280 (485)
Q Consensus 214 -----D~tiKlWdl~~g~~l--~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl-~~~~~~~----- 280 (485)
|++|+|||+++++++ ..+ ...|..++|||+|..+++.+ |.+|++||+.+|++.+.. .++...+
T Consensus 84 ~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~---~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~ 159 (719)
T 1z68_A 84 WRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY---QNNIYLKQRPGDPPFQITFNGRENKIFNGIP 159 (719)
T ss_dssp SSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCCCCBTTTEEESSC
T ss_pred EEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE---CCeEEEEeCCCCCcEEEecCCCcCCeEcccc
Confidence 799999999999873 223 25688999999776666654 369999999999886533 2322211
Q ss_pred ------------eEEEEEecCCCEEEEEeCCC----------------------------------cEEEEECCCCeeE-
Q 011452 281 ------------KKVDFIEQFNEKLLVKQENE----------------------------------NLQILDVRNFELT- 313 (485)
Q Consensus 281 ------------~~V~f~~~~~~~lls~s~D~----------------------------------tIkIWDv~tg~~~- 313 (485)
..++|+ |||.+|++++.|. +|++||+.+++++
T Consensus 160 ~~v~~ee~~~~~~~~~wS-PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~ 238 (719)
T 1z68_A 160 DWVYEEEMLATKYALWWS-PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVG 238 (719)
T ss_dssp CHHHHHHTTCSSCCEEEC-TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHC
T ss_pred cceeeeecccCcccEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccc
Confidence 489997 8899999987542 8999999998863
Q ss_pred --E-----ecccCCCceEEEEEcCCCcEEEEEe-C----CcEEEEe----CC-CcEEEEe----ecCCCCCCCCCee---
Q 011452 314 --E-----VSRTEFMTPSAFIFLYENQLFLTFR-N----RTVAVWN----FR-GELVTSF----EDHLLWHPDCNTN--- 369 (485)
Q Consensus 314 --~-----~l~gh~~~v~avaFspdg~llaS~s-D----~TIklWd----~~-G~ll~tl----~gH~~~~~~~~v~--- 369 (485)
+ .+.+|...+.+++||||++++++.. . ..|.+|| .. |++...+ ++|..| +.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~ 313 (719)
T 1z68_A 239 PQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGW-----AGGFF 313 (719)
T ss_dssp CEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSC-----SSSSS
T ss_pred eeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCce-----Ecccc
Confidence 2 2447888999999999999888854 2 2488899 85 7776666 588877 55
Q ss_pred --EEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccc
Q 011452 370 --NIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASR 447 (485)
Q Consensus 370 --svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (485)
.++|||||+.|+..+.+ .+....|.+||+.+++ +..|..+.
T Consensus 314 ~~~~~~spdg~~l~~~~~~-------~~g~~~l~~~~~~~~~-~~~lt~~~----------------------------- 356 (719)
T 1z68_A 314 VSTPVFSYDAISYYKIFSD-------KDGYKHIHYIKDTVEN-AIQITSGK----------------------------- 356 (719)
T ss_dssp CCCCEECTTSSCEEEEEEC-------TTSCEEEEEESSCSTT-CEECSCSS-----------------------------
T ss_pred CCccEECCCCCeEEEEEEc-------cCCceEEEEEECCCCc-eEecccCc-----------------------------
Confidence 78999999976653220 0113478888988877 55666554
Q ss_pred cccchhcccCCeEEEEEcCCCCEEEEecCC-----CcEEEcc
Q 011452 448 IRSTVAEALEDITALFYDEDRNEIYTGNRH-----GLVHVWS 484 (485)
Q Consensus 448 ~~~~~~~~l~~V~sl~fspDg~~LaSgs~D-----gtVklWd 484 (485)
..|..+.++ ||+.|+..+.+ ++++||.
T Consensus 357 ---------~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 357 ---------WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp ---------SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred ---------eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 167778888 88877666654 8999996
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=2e-24 Score=208.27 Aligned_cols=229 Identities=7% Similarity=0.021 Sum_probs=178.1
Q ss_pred EEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CC--cEEEEEEcCCce-EEEEEcCCCCeeEEEEecCCCeEEEEe
Q 011452 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DK--NVQEIKISPGIM-LLIFTKASGHVPLKILSIEDGTVLKSF 273 (485)
Q Consensus 198 V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~--~V~~VafSpg~~-ll~sss~~~D~tIklWdi~tG~~L~tl 273 (485)
++|+ ++++++++++.|++|++||+++++.+.++. +. .+..++|+|++. ++++.. .+.+|.+||+++|+.+.++
T Consensus 5 ~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~--~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 5 PALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN--HYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEE
T ss_pred cccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC--CCCcEEEEeCCCCcEEEEE
Confidence 5675 789999999999999999999999988876 33 588999999765 555543 4479999999999999888
Q ss_pred ecCC------cceeEEEEEecCCCEEEEEeCC------------CcEEEEECCCCee---EEecccCCCceEEEEEcCCC
Q 011452 274 NHLL------HRNKKVDFIEQFNEKLLVKQEN------------ENLQILDVRNFEL---TEVSRTEFMTPSAFIFLYEN 332 (485)
Q Consensus 274 ~~~~------~~~~~V~f~~~~~~~lls~s~D------------~tIkIWDv~tg~~---~~~l~gh~~~v~avaFspdg 332 (485)
.... ..+..++|+ |++.+|++++.+ ++|.+||+.+++. +..+.. ...+.+++|+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg 159 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDG 159 (349)
T ss_dssp ESCCSTTEEEECSSCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTS
T ss_pred EcccccccccccccceEEC-CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCC
Confidence 7321 125688986 788888888754 9999999998554 334433 3468899999999
Q ss_pred cEEEEEeCCcEEEEeCC-CcEEEEeecCCCCCC-----------------------------------------------
Q 011452 333 QLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHP----------------------------------------------- 364 (485)
Q Consensus 333 ~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~----------------------------------------------- 364 (485)
++++ ++ +.|.+||.. |+++.++..+....+
T Consensus 160 ~l~~-~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 160 SLYV-AG-PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp CEEE-ES-SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred cEEE-cc-CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 9555 43 349999995 998888765420000
Q ss_pred ----------------CCCeeEEEECC-CCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccc
Q 011452 365 ----------------DCNTNNIYITS-DQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECS 427 (485)
Q Consensus 365 ----------------~~~v~svafSp-DG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~ 427 (485)
...+.+++|+| ||++|+.+ . ++|.+||+.+++.+.++..+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~------------~~v~~~d~~~~~~~~~~~~~~--------- 295 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-L------------NRLAKYDLKQRKLIKAANLDH--------- 295 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-E------------SEEEEEETTTTEEEEEEECSS---------
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-c------------CeEEEEECccCeEEEEEcCCC---------
Confidence 01245778889 99999987 3 799999999999999886532
Q ss_pred cCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 428 CSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
.+.+++|+|||+.|++++.+++|++||.
T Consensus 296 ------------------------------~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 296 ------------------------------TYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp ------------------------------CCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred ------------------------------CccceEECCCCCEEEEecCCCeEEEEec
Confidence 5668999999999999999999999983
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=1.8e-22 Score=199.06 Aligned_cols=275 Identities=14% Similarity=0.134 Sum_probs=184.9
Q ss_pred EEEEEe----CCCeEEeeec--ccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEecc--C
Q 011452 107 IVFALA----QSGVCAAFCR--ETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRR--G 178 (485)
Q Consensus 107 ~ias~s----~dgtiklW~~--~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~--G 178 (485)
+++.++ .++.+.+|.+ ++|+....... +......|+|+|||+.|++++.++..+ ..+.+|++.. |
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~------~~v~~~~~~~~~g 87 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQ------AAVSAFAFDKEKG 87 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTT------CEEEEEEEETTTT
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCC------CcEEEEEEeCCCC
Confidence 445553 4678999876 56765443333 555678899999999999988653233 5888998854 5
Q ss_pred CcCcccceeeec-cccCceEEEEeCCCCeEEEEee-CCCcEEEeecCCCeEEE------EEcC----------CcEEEEE
Q 011452 179 KPDAGFALFESE-SLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLKNYTMLY------SISD----------KNVQEIK 240 (485)
Q Consensus 179 ~~~~~~~lf~~~-~~~~~~~V~Fs~pnG~~Las~s-~D~tiKlWdl~~g~~l~------tl~~----------~~V~~Va 240 (485)
++. .+.... ....+..++| +|+.|+.++ .|++|.+|++.....+. ...+ ..+.+++
T Consensus 88 ~~~---~~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 88 TLH---LLNTQKTMGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR 161 (361)
T ss_dssp EEE---EEEEEECSSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred cEE---EeeEeccCCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence 541 122211 2234556777 566665554 68999999997533221 1111 2468899
Q ss_pred EcCCce-EEEEEcCCCCeeEEEEecCCCe-------EE-----EEee-cCCcceeEEEEEecCCCEEEEEe-CCCcEEEE
Q 011452 241 ISPGIM-LLIFTKASGHVPLKILSIEDGT-------VL-----KSFN-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQIL 305 (485)
Q Consensus 241 fSpg~~-ll~sss~~~D~tIklWdi~tG~-------~L-----~tl~-~~~~~~~~V~f~~~~~~~lls~s-~D~tIkIW 305 (485)
|||++. ++++.. .+.+|++|++.... +. ..+. .+......++|+ |++..+++++ .+++|++|
T Consensus 162 ~spdg~~l~~~~~--~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~ 238 (361)
T 3scy_A 162 ITPDGKYLLADDL--GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFN-SDGKFAYLINEIGGTVIAF 238 (361)
T ss_dssp ECTTSSEEEEEET--TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTCEEEEE
T ss_pred ECCCCCEEEEEeC--CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEc-CCCCEEEEEcCCCCeEEEE
Confidence 999776 555543 34799999887543 21 1111 222445689996 7788887776 79999999
Q ss_pred ECCCCeeE--E---ecccCCCceEEEEEcCCCcEEEEEe-C--CcEEEEeCC---Cc--EEEEeecCCCCCCCCCeeEEE
Q 011452 306 DVRNFELT--E---VSRTEFMTPSAFIFLYENQLFLTFR-N--RTVAVWNFR---GE--LVTSFEDHLLWHPDCNTNNIY 372 (485)
Q Consensus 306 Dv~tg~~~--~---~l~gh~~~v~avaFspdg~llaS~s-D--~TIklWd~~---G~--ll~tl~gH~~~~~~~~v~sva 372 (485)
|+.++++. . ....+...+..++|+|||++|+.+. + ++|.+|+++ |+ .+..+.. ... +..++
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~-----~~~~~ 312 (361)
T 3scy_A 239 RYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIH-----PRNFI 312 (361)
T ss_dssp EEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSC-----CCEEE
T ss_pred EecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCC-----CceEE
Confidence 99988652 2 2344556788999999999886655 5 799999984 66 4555554 223 68999
Q ss_pred ECCCCCEEEEEecCCCCCCCCcCCCCeEEEE--eCCCCeEEEE
Q 011452 373 ITSDQDLIISYCKADSDDPLAEGNAGSINIS--NILTGKCLAK 413 (485)
Q Consensus 373 fSpDG~~LaS~s~d~~~d~~~~~~DgtIklW--dl~TGk~l~t 413 (485)
|+|||++|+.++.+ +++|.+| |..+|++...
T Consensus 313 ~spdg~~l~~~~~~----------~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 313 ITPNGKYLLVACRD----------TNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp ECTTSCEEEEEETT----------TTEEEEEEECTTTCCEEEC
T ss_pred ECCCCCEEEEEECC----------CCCEEEEEEECCCCcEeec
Confidence 99999999998852 6899995 6668887554
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=1e-22 Score=200.88 Aligned_cols=258 Identities=10% Similarity=0.149 Sum_probs=178.1
Q ss_pred eEEEEeEe--ccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC----CcEEEeecCC--CeE--EEEEc--CCc
Q 011452 168 RSTRIEYI--RRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKN--YTM--LYSIS--DKN 235 (485)
Q Consensus 168 ~t~~lw~i--~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D----~tiKlWdl~~--g~~--l~tl~--~~~ 235 (485)
..+.+|.+ .+|++.. +... +...|..++|+ |||++|++++.| ++|.+|++.. |++ +..+. +..
T Consensus 27 ~~i~~~~~d~~~g~~~~---~~~~-~~~~p~~l~~s-pdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 27 KGIYTFRFNEETGESLP---LSDA-EVANPSYLIPS-ADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp CEEEEEEEETTTCCEEE---EEEE-ECSCCCSEEEC-TTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCEEEEEEeCCCCCEEE---eecc-cCCCCceEEEC-CCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 57778876 5676522 2221 34567789998 799999988876 8999999865 653 34443 456
Q ss_pred EEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEee------c--------CCcceeEEEEEecCCCEEEEEe-CCC
Q 011452 236 VQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFN------H--------LLHRNKKVDFIEQFNEKLLVKQ-ENE 300 (485)
Q Consensus 236 V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~------~--------~~~~~~~V~f~~~~~~~lls~s-~D~ 300 (485)
...+++ ++..++++.. .+++|.+|++.++..+..+. + +..+...++|+ |++.++++++ .++
T Consensus 102 p~~~~~-dg~~l~~~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~ 177 (361)
T 3scy_A 102 PCYLTT-NGKNIVTANY--SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT-PDGKYLLADDLGTD 177 (361)
T ss_dssp EEEEEE-CSSEEEEEET--TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC-TTSSEEEEEETTTT
T ss_pred cEEEEE-CCCEEEEEEC--CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC-CCCCEEEEEeCCCC
Confidence 788888 7776766643 34799999997554433221 1 12234679996 7788787775 689
Q ss_pred cEEEEECCCCe-------e------EEecccCCCceEEEEEcCCCcEEEEEe--CCcEEEEeCC-CcE--EEEeecCCCC
Q 011452 301 NLQILDVRNFE-------L------TEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GEL--VTSFEDHLLW 362 (485)
Q Consensus 301 tIkIWDv~tg~-------~------~~~l~gh~~~v~avaFspdg~llaS~s--D~TIklWd~~-G~l--l~tl~gH~~~ 362 (485)
+|++|++.... + ......+...+..++|+|||++|+.++ +++|.+||++ |++ +.++..+...
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~ 257 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN 257 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC
Confidence 99999887533 2 122234456789999999999765554 8999999995 765 3444332211
Q ss_pred CCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC--CCe--EEEEecCCCCCCCCcccccCCCCCCCCcc
Q 011452 363 HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL--TGK--CLAKIRASNGLPAENECSCSGDYSSGSCN 438 (485)
Q Consensus 363 ~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~--TGk--~l~tl~gH~~~~~~~~~~~~~~~~~~~~~ 438 (485)
......++|||||++|+.++. +.+++|.||++. +|+ .+..+.. .
T Consensus 258 --~~~~~~i~~spdg~~l~v~~~---------~~~~~i~v~~~~~~~g~~~~~~~~~~-g-------------------- 305 (361)
T 3scy_A 258 --AQGSGDIHLSPDGKYLYASNR---------LKADGVAIFKVDETNGTLTKVGYQLT-G-------------------- 305 (361)
T ss_dssp --CCCEEEEEECTTSSEEEEEEC---------SSSCEEEEEEECTTTCCEEEEEEEEC-S--------------------
T ss_pred --CCCcccEEECCCCCEEEEECC---------CCCCEEEEEEEcCCCCcEEEeeEecC-C--------------------
Confidence 011679999999999977664 014899999995 566 4444443 2
Q ss_pred ccccccccccccchhcccCCeEEEEEcCCCCEEEEec-CCCcEEEcc
Q 011452 439 VKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGN-RHGLVHVWS 484 (485)
Q Consensus 439 ~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs-~DgtVklWd 484 (485)
..+.+++|+|||+.|+.++ .+++|++|+
T Consensus 306 ------------------~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 306 ------------------IHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp ------------------SCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred ------------------CCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 1677899999999988887 679999974
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.92 E-value=6.2e-24 Score=208.89 Aligned_cols=317 Identities=9% Similarity=-0.008 Sum_probs=201.4
Q ss_pred eeecccCcEEEEeecCCc----ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccC
Q 011452 119 AFCRETNQRICFLNVTAD----EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKW 194 (485)
Q Consensus 119 lW~~~tG~~l~tl~g~~~----~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~ 194 (485)
..|..+|+.+..|..... ..+.+++|||||+.|+.++..... ..+.+|++..|+.. .+... ....
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~-------~~l~~~d~~~~~~~---~l~~~-~~~~ 82 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGN-------RNYYLLNLETQQAV---QLTEG-KGDN 82 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSS-------CEEEEEETTTTEEE---ECCCS-SCBC
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCC-------ceEEEEECCCCcEE---EeecC-CCCc
Confidence 447788988888765211 126788999999999887643222 36678887777651 22221 1111
Q ss_pred ceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE--cCCcEEE-------------------EEEcCCceEEEEEc-
Q 011452 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI--SDKNVQE-------------------IKISPGIMLLIFTK- 252 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl--~~~~V~~-------------------VafSpg~~ll~sss- 252 (485)
...+.|+ |||+.|++.+.++.|.+||+.+++..... +..+... ++++|++..++...
T Consensus 83 ~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 83 TFGGFIS-TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TTTCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cccceEC-CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 2236787 89999999999999999999998854433 3333333 34566444332211
Q ss_pred --CCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCC------CcEEEEECCCCeeEEecccC-CCce
Q 011452 253 --ASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNFELTEVSRTE-FMTP 323 (485)
Q Consensus 253 --~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D------~tIkIWDv~tg~~~~~l~gh-~~~v 323 (485)
...+..|.+||+.+|++..... +...+..++|++.++.+|+..+.+ ..|.+||+.+++......++ ...+
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC 240 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEE
T ss_pred ccCCCcceEEEEECCCCcEEeecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccc
Confidence 1345799999999998766554 446678899973267777776533 46899999877765555422 3368
Q ss_pred EEEEEcCCCcEEEEEe-C-----CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECC-CCCEEEEEecCCC---CC--
Q 011452 324 SAFIFLYENQLFLTFR-N-----RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS-DQDLIISYCKADS---DD-- 390 (485)
Q Consensus 324 ~avaFspdg~llaS~s-D-----~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSp-DG~~LaS~s~d~~---~d-- 390 (485)
..++|+|||+.|+..+ + ++|.+||+. |+.... ..... .. ++|+| ||++|+.++.+.+ .|
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~------~~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEV-MVMPP------CS-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEE-EECCS------EE-EEEECSSSSEEEEEECCC--------
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEe-eeCCC------CC-CCccCCCCceEEEecCCcceeecccc
Confidence 8899999999877775 4 459999996 665432 22211 33 89999 9999998653100 00
Q ss_pred CCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCE
Q 011452 391 PLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNE 470 (485)
Q Consensus 391 ~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~ 470 (485)
......+..|.+||+.+|+. ..|..|...... .+.+ ....+.+++|+|||+.
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~-------------~~~~--------------~~~~~~~~~~s~dg~~ 364 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDV-------------LDGD--------------RQITHPHPSFTPNDDG 364 (396)
T ss_dssp --CCCCCCEEEEEETTTTBC-CEEEECCCCCCC-------------BTTB--------------SSTTCCCCEECTTSSE
T ss_pred ccccCCCCcEEEEecccCce-EEccCCCCcccc-------------cccc--------------ccCCCCCceEccCCCe
Confidence 00011357899999998875 456555410000 0000 0012456789999999
Q ss_pred EEEec-CCCcEEEcc
Q 011452 471 IYTGN-RHGLVHVWS 484 (485)
Q Consensus 471 LaSgs-~DgtVklWd 484 (485)
|+.++ .++...||.
T Consensus 365 l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 365 VLFTSDFEGVPAIYI 379 (396)
T ss_dssp EEEEECTTSSCEEEE
T ss_pred EEEEecCCCCceEEE
Confidence 88776 467777774
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=2.6e-23 Score=227.88 Aligned_cols=295 Identities=9% Similarity=0.041 Sum_probs=194.6
Q ss_pred ccCCCCcccccccccccccceEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcc----cEEEEEEeeCCCEEEE
Q 011452 78 THDPKGHCSMVLPFLRKRSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADE----VIRSLFYNKNNDSLIT 153 (485)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~s~V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~----~i~sv~~spdg~~Las 153 (485)
+|.++.....+.|. +++|++. ||+|++||..+|++...+.+.... ...+++|||||+.|++
T Consensus 14 ~~~~~~~~~~w~~d-------------g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~ 78 (740)
T 4a5s_A 14 TYRLKLYSLRWISD-------------HEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILL 78 (740)
T ss_dssp CSCCCCCCEEECSS-------------SEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEE
T ss_pred cccccccccEECCC-------------CcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEE
Confidence 44455555555555 8888886 999999999999988777663222 2245889999999999
Q ss_pred EEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEE-Ec
Q 011452 154 VSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-IS 232 (485)
Q Consensus 154 ~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~t-l~ 232 (485)
++.+...- .+=.-..+.|||+.+|++. +|.. +...+..++|| |||+.||+++ |+.|.+||+.+|++... ..
T Consensus 79 ~~~~~~~~-r~~~~~~~~~~d~~~~~~~---~l~~--~~~~~~~~~~S-PdG~~la~~~-~~~i~~~~~~~~~~~~lt~~ 150 (740)
T 4a5s_A 79 EYNYVKQW-RHSYTASYDIYDLNKRQLI---TEER--IPNNTQWVTWS-PVGHKLAYVW-NNDIYVKIEPNLPSYRITWT 150 (740)
T ss_dssp EEEEEECS-SSCEEEEEEEEETTTTEEC---CSSC--CCTTEEEEEEC-SSTTCEEEEE-TTEEEEESSTTSCCEECCSC
T ss_pred EECCeeeE-EEccceEEEEEECCCCcEE---Eccc--CCCcceeeEEC-CCCCEEEEEE-CCeEEEEECCCCceEEEcCC
Confidence 88643211 1111246679999888862 2332 23456689998 8999999986 78999999998885432 22
Q ss_pred C--CcE-----------------EEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEE
Q 011452 233 D--KNV-----------------QEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL 293 (485)
Q Consensus 233 ~--~~V-----------------~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~l 293 (485)
+ ..+ .+++||||+..+++.+.+ +..+++|++...... .++......+.|. ..++.
T Consensus 151 g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d-~~~v~~~~~~~~~~~---~~~~~~~~~~~yp-~~G~~- 224 (740)
T 4a5s_A 151 GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN-DTEVPLIEYSFYSDE---SLQYPKTVRVPYP-KAGAV- 224 (740)
T ss_dssp CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE-CTTCCEEEEEECCST---TCSSCEEEEEECC-BTTSC-
T ss_pred CCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEc-ccCCceEEEEeecCC---CCCCCcceeecCC-CCcCc-
Confidence 2 123 248999988766665533 245888875211000 0133445566663 32321
Q ss_pred EEEeCCCcEEEEECCC---C---eeEEecc-----cCCCceEEEEEcCCCcEEEEEe-----CCcEEEEeCC-Cc----E
Q 011452 294 LVKQENENLQILDVRN---F---ELTEVSR-----TEFMTPSAFIFLYENQLFLTFR-----NRTVAVWNFR-GE----L 352 (485)
Q Consensus 294 ls~s~D~tIkIWDv~t---g---~~~~~l~-----gh~~~v~avaFspdg~llaS~s-----D~TIklWd~~-G~----l 352 (485)
..+.+|+|||+.+ + ++.+... +|...+..++|||||++++... +.+|.+||++ |+ |
T Consensus 225 ---~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~ 301 (740)
T 4a5s_A 225 ---NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC 301 (740)
T ss_dssp ---CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE
T ss_pred ---CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce
Confidence 1223789999999 8 5555433 4888999999999999777654 2379999995 77 3
Q ss_pred E--EEe--ecCCCCCCCCCeeEEEECCCCCEEE-EEecCCCCCCCCcCCCCeEEEEeCCCCeEEE
Q 011452 353 V--TSF--EDHLLWHPDCNTNNIYITSDQDLII-SYCKADSDDPLAEGNAGSINISNILTGKCLA 412 (485)
Q Consensus 353 l--~tl--~gH~~~~~~~~v~svafSpDG~~La-S~s~d~~~d~~~~~~DgtIklWdl~TGk~l~ 412 (485)
. .++ ++|..|.......+++|||||+.|+ ..+.. +....|.+||+.+|++.+
T Consensus 302 ~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~--------~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 302 LVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE--------EGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp CGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT--------TSCEEEEEEETTCSSCEE
T ss_pred eEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC--------CCceEEEEEECCCCceEe
Confidence 3 233 6788882100012789999999988 77641 123679999998777654
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=3.6e-22 Score=199.62 Aligned_cols=270 Identities=9% Similarity=0.023 Sum_probs=184.5
Q ss_pred EEEEEeCC--CeEEeeec--ccCcEEE--EeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEec-cCC
Q 011452 107 IVFALAQS--GVCAAFCR--ETNQRIC--FLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIR-RGK 179 (485)
Q Consensus 107 ~ias~s~d--gtiklW~~--~tG~~l~--tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~-~G~ 179 (485)
.|+.+++. +.|.+|++ ++|++-. .........+..++|+|||+.|++++. + ++.+|++. +|+
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~----~-------~v~~~~~~~~g~ 72 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM----K-------KWSSFAVKSPTE 72 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB----T-------EEEEEEEEETTE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc----c-------eEEEEEECCCCC
Confidence 45566653 56777664 5676532 221112335788999999999988663 2 78899986 777
Q ss_pred cCcccceeeeccccCceEEEEeCCCCeE--EEEee-------------CCCcEEEeecC-CCeEEEEEc------CCcEE
Q 011452 180 PDAGFALFESESLKWPGFVEFDDVNGKV--LTYSA-------------QDSIYKVFDLK-NYTMLYSIS------DKNVQ 237 (485)
Q Consensus 180 ~~~~~~lf~~~~~~~~~~V~Fs~pnG~~--Las~s-------------~D~tiKlWdl~-~g~~l~tl~------~~~V~ 237 (485)
+. .+......+.+..++|+ |||+. |+++. .|+++++|++. +|++...+. ...+.
T Consensus 73 ~~---~~~~~~~~g~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~ 148 (365)
T 1jof_A 73 IV---HEASHPIGGHPRANDAD-TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIH 148 (365)
T ss_dssp EE---EEEEEECCSSGGGGCTT-SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEE
T ss_pred EE---EeeEeecCCCCccEEEC-CCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcce
Confidence 62 12322111345578997 79994 55553 69999999997 577654432 35799
Q ss_pred EEEEcCCceEEEEEcCCCCeeEEEEecC-CCeEE--EEee--cCCcceeEEEEEecCCCEEEEEe-CCCcEEEEECC--C
Q 011452 238 EIKISPGIMLLIFTKASGHVPLKILSIE-DGTVL--KSFN--HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR--N 309 (485)
Q Consensus 238 ~VafSpg~~ll~sss~~~D~tIklWdi~-tG~~L--~tl~--~~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~--t 309 (485)
+++|||++..+..+. ..+.+|++||+. +|++. ..+. .|......++|+ |++..|++++ .+++|++|++. +
T Consensus 149 ~~~~spdG~~l~~~~-~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 149 GMVFDPTETYLYSAD-LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH-PTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp EEEECTTSSEEEEEE-TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEECCCCCEEEEEc-CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEEC-CCCCEEEEEECCCCeEEEEEEeCCC
Confidence 999999776444332 234699999998 88764 3443 134567789996 7788888876 57999999765 6
Q ss_pred CeeE------Eecc----cCCC------ceEEEE-EcCCCcEEEEEe--CC-----cEEEEeCC--CcEEE---EeecCC
Q 011452 310 FELT------EVSR----TEFM------TPSAFI-FLYENQLFLTFR--NR-----TVAVWNFR--GELVT---SFEDHL 360 (485)
Q Consensus 310 g~~~------~~l~----gh~~------~v~ava-Fspdg~llaS~s--D~-----TIklWd~~--G~ll~---tl~gH~ 360 (485)
|++. .++. +|.. .+.+++ |+|||++|+++. +. +|++|+++ |++.. .+..+.
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~ 306 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT 306 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC
Confidence 7653 2232 2332 589999 999999877665 33 89999983 77654 233343
Q ss_pred CCCCCCCeeEEEECC---CCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCC
Q 011452 361 LWHPDCNTNNIYITS---DQDLIISYCKADSDDPLAEGNAGSINISNILTG 408 (485)
Q Consensus 361 ~~~~~~~v~svafSp---DG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TG 408 (485)
.. ...++|+| ||++|++++.+ +++|+||++..+
T Consensus 307 ~~-----~~~~a~sp~~~dg~~l~v~~~~----------~~~v~v~~~~~~ 342 (365)
T 1jof_A 307 SG-----GHSNAVSPCPWSDEWMAITDDQ----------EGWLEIYRWKDE 342 (365)
T ss_dssp CC-----TTCCCEEECTTCTTEEEEECSS----------SCEEEEEEEETT
T ss_pred CC-----cccceecCCCcCCCEEEEEEcC----------CCeEEEEEEchh
Confidence 33 56899999 89999998752 589999998766
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=8.5e-23 Score=204.11 Aligned_cols=245 Identities=11% Similarity=0.046 Sum_probs=171.9
Q ss_pred CceEEEEeCCCCeEEEEeeCCCcEEEeecC-CCeEEEEEc---CCcEEEEEEcCCce--EEEEEc-------CC----CC
Q 011452 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSIS---DKNVQEIKISPGIM--LLIFTK-------AS----GH 256 (485)
Q Consensus 194 ~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~-~g~~l~tl~---~~~V~~VafSpg~~--ll~sss-------~~----~D 256 (485)
.+.+++|+ |||++|++++.+ +|.+||+. +|++..... ...+..++|||++. ++..+. .. .+
T Consensus 41 ~~~~~a~s-pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 41 PISWMTFD-HERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCSEEEEC-TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCcEEEEC-CCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 56789998 799999888888 99999997 888754432 12355689999777 333322 10 35
Q ss_pred eeEEEEecC-CCeEEEEeec----CCcceeEEEEEecCCCEEEEEe-CCCcEEEEECC-CCeeEE--ecc--cCCCceEE
Q 011452 257 VPLKILSIE-DGTVLKSFNH----LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-NFELTE--VSR--TEFMTPSA 325 (485)
Q Consensus 257 ~tIklWdi~-tG~~L~tl~~----~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~-tg~~~~--~l~--gh~~~v~a 325 (485)
+++++|++. +|++..++.. +..+...++|+ |++.+|+++. .+++|++||+. +|++.. .+. .|...+..
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~s-pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFD-PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEEC-CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 799999997 6887766542 44567899996 7788888775 57899999998 787643 232 24567999
Q ss_pred EEEcCCCcEEEEEe--CCcEEEEeCC---CcEEE---Eee-------cCCCC-CCCCCeeEEE-ECCCCCEEEEEecCCC
Q 011452 326 FIFLYENQLFLTFR--NRTVAVWNFR---GELVT---SFE-------DHLLW-HPDCNTNNIY-ITSDQDLIISYCKADS 388 (485)
Q Consensus 326 vaFspdg~llaS~s--D~TIklWd~~---G~ll~---tl~-------gH~~~-~~~~~v~sva-fSpDG~~LaS~s~d~~ 388 (485)
++|+|||++|+.++ +++|.+|+++ |++.. ++. +|... .+...+..++ |||||++|++++...
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~- 276 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN- 276 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES-
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC-
Confidence 99999999887766 7899999763 77632 222 22210 0000278999 999999998776410
Q ss_pred CCCCCcCCCCeEEEEeCC-CCeEEEE---ecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEE
Q 011452 389 DDPLAEGNAGSINISNIL-TGKCLAK---IRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFY 464 (485)
Q Consensus 389 ~d~~~~~~DgtIklWdl~-TGk~l~t---l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~f 464 (485)
+ ....++|++|++. +|++... +..+. ..+.+++|
T Consensus 277 -~---~~~~~~i~v~~~~~~g~~~~~~~~~~~~~--------------------------------------~~~~~~a~ 314 (365)
T 1jof_A 277 -K---FELQGYIAGFKLRDCGSIEKQLFLSPTPT--------------------------------------SGGHSNAV 314 (365)
T ss_dssp -S---TTSCCEEEEEEECTTSCEEEEEEEEECSS--------------------------------------CCTTCCCE
T ss_pred -C---CCCCCeEEEEEECCCCCEEEeeeeeecCC--------------------------------------CCccccee
Confidence 0 0001399999996 7886542 32332 14556899
Q ss_pred cC---CCCEEEEecCC-CcEEEcc
Q 011452 465 DE---DRNEIYTGNRH-GLVHVWS 484 (485)
Q Consensus 465 sp---Dg~~LaSgs~D-gtVklWd 484 (485)
+| ||+.||+++.+ ++|+||+
T Consensus 315 sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 315 SPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp EECTTCTTEEEEECSSSCEEEEEE
T ss_pred cCCCcCCCEEEEEEcCCCeEEEEE
Confidence 99 89999999875 9999997
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=5.2e-24 Score=233.34 Aligned_cols=213 Identities=9% Similarity=0.052 Sum_probs=155.1
Q ss_pred eEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCC-----cE--EEEE
Q 011452 168 RSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-----NV--QEIK 240 (485)
Q Consensus 168 ~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~-----~V--~~Va 240 (485)
+.+.|+++..|.+ . .+...|+|+ |||++|+++ |++|++||+++|++...+.++ .+ .+++
T Consensus 3 ~~~tl~~~~~~~~-------~----~~~~~~~w~-~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (740)
T 4a5s_A 3 KTYTLTDYLKNTY-------R----LKLYSLRWI-SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYS 68 (740)
T ss_dssp EECCHHHHHHTCS-------C----CCCCCEEEC-SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEE
T ss_pred CceeHHHHhcCcc-------c----ccccccEEC-CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceE
Confidence 3455666666643 1 123478998 799999986 999999999999987776542 12 4589
Q ss_pred EcCCceEEEEEcCCC-------CeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q 011452 241 ISPGIMLLIFTKASG-------HVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELT 313 (485)
Q Consensus 241 fSpg~~ll~sss~~~-------D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~ 313 (485)
|||++..+++++.+. ...+.|||+++|++. .+..|...+..++|+ |||.+|+.. .|++|.+||+.++++.
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~S-PdG~~la~~-~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWS-PVGHKLAYV-WNNDIYVKIEPNLPSY 145 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEEC-SSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEEC-CCCCEEEEE-ECCeEEEEECCCCceE
Confidence 999777666554321 145679999999865 466677788999997 788888877 5789999999999876
Q ss_pred Eec-ccCCCce-----------------EEEEEcCCCcEEEEEe-CC---------------------------------
Q 011452 314 EVS-RTEFMTP-----------------SAFIFLYENQLFLTFR-NR--------------------------------- 341 (485)
Q Consensus 314 ~~l-~gh~~~v-----------------~avaFspdg~llaS~s-D~--------------------------------- 341 (485)
+.. .++...+ .+++|||||+.||..+ |.
T Consensus 146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~ 225 (740)
T 4a5s_A 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN 225 (740)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcC
Confidence 643 3443322 3589999999999987 43
Q ss_pred ---cEEEEeCCC---c---EEEEee------cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC
Q 011452 342 ---TVAVWNFRG---E---LVTSFE------DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 342 ---TIklWd~~G---~---ll~tl~------gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
+|.|||+++ . ....+. +|..+ +.+++|||||++++..... .+++.+|++||+.
T Consensus 226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~wspdg~~~~~~~~r-------~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY-----LCDVTWATQERISLQWLRR-------IQNYSVMDICDYD 293 (740)
T ss_dssp CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEE-----EEEEEEEETTEEEEEEEES-------STTEEEEEEEEEE
T ss_pred CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeE-----EEEEEEeCCCeEEEEEeCC-------CCCEEEEEEEECC
Confidence 478888855 3 333443 36655 8999999999988876541 2235689999999
Q ss_pred CCe
Q 011452 407 TGK 409 (485)
Q Consensus 407 TGk 409 (485)
||+
T Consensus 294 tg~ 296 (740)
T 4a5s_A 294 ESS 296 (740)
T ss_dssp TTT
T ss_pred CCc
Confidence 998
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.91 E-value=3.1e-21 Score=184.26 Aligned_cols=235 Identities=10% Similarity=0.209 Sum_probs=186.0
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--------CcEEEEEEc-CCceEEEEEcCCCCeeEEE
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--------KNVQEIKIS-PGIMLLIFTKASGHVPLKI 261 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--------~~V~~VafS-pg~~ll~sss~~~D~tIkl 261 (485)
++..|..|+|+ ++|+++++.+.++.|++||.+ ++.+..+.. ..+..|+|+ +++.++++... .+..|++
T Consensus 28 ~~~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-~~~~i~~ 104 (286)
T 1q7f_A 28 QFTEPSGVAVN-AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-PTHQIQI 104 (286)
T ss_dssp CBSCEEEEEEC-TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-GGCEEEE
T ss_pred ccCCCceEEEC-CCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-CCCEEEE
Confidence 45678899998 799999998899999999986 677766632 468999995 78887777432 2479999
Q ss_pred EecCCCeEEEEee-cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecc--cCCCceEEEEEcCCCcEEEEE
Q 011452 262 LSIEDGTVLKSFN-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR--TEFMTPSAFIFLYENQLFLTF 338 (485)
Q Consensus 262 Wdi~tG~~L~tl~-~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~--gh~~~v~avaFspdg~llaS~ 338 (485)
|| .+|+.+.++. .+......|+|. +++..+++...++.|.+||.. ++.+..+. ++...+..++|+|+|+++++.
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVD-NKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEe-CCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 99 6899998885 334567789886 556544444678999999975 56655553 566789999999999999998
Q ss_pred e-CCcEEEEeCCCcEEEEeecCC--CCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCC-eEEEEeCCCCeEEEEe
Q 011452 339 R-NRTVAVWNFRGELVTSFEDHL--LWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAG-SINISNILTGKCLAKI 414 (485)
Q Consensus 339 s-D~TIklWd~~G~ll~tl~gH~--~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dg-tIklWdl~TGk~l~tl 414 (485)
+ ++.|++||.+|+.+.++..+. .. ..+|+|+|||+++++... ++ .|.+|| .+|+.+.++
T Consensus 182 ~~~~~i~~~~~~g~~~~~~~~~g~~~~-----p~~i~~d~~G~l~v~~~~-----------~~~~i~~~~-~~g~~~~~~ 244 (286)
T 1q7f_A 182 NRAHCVKVFNYEGQYLRQIGGEGITNY-----PIGVGINSNGEILIADNH-----------NNFNLTIFT-QDGQLISAL 244 (286)
T ss_dssp GGGTEEEEEETTCCEEEEESCTTTSCS-----EEEEEECTTCCEEEEECS-----------SSCEEEEEC-TTSCEEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEccCCccCC-----CcEEEECCCCCEEEEeCC-----------CCEEEEEEC-CCCCEEEEE
Confidence 8 999999999999998886542 33 789999999999998765 45 999999 469999998
Q ss_pred cCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 415 RASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 415 ~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
..+.. ...+.+++|+|||+.+++ +.|++|++|+.
T Consensus 245 ~~~~~------------------------------------~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 245 ESKVK------------------------------------HAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp EESSC------------------------------------CSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred cccCC------------------------------------CCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 77642 015789999999998887 57999999973
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.90 E-value=4.2e-22 Score=212.47 Aligned_cols=293 Identities=11% Similarity=-0.015 Sum_probs=195.3
Q ss_pred cccceEEEEEecCEEEEEe----CCCeEEeeecccCcEEEEeecCCcccEE---------EEEEe--eCCCE-EEEEEee
Q 011452 94 KRSKIIEIVAARDIVFALA----QSGVCAAFCRETNQRICFLNVTADEVIR---------SLFYN--KNNDS-LITVSVY 157 (485)
Q Consensus 94 ~~s~V~~i~~s~~~ias~s----~dgtiklW~~~tG~~l~tl~g~~~~~i~---------sv~~s--pdg~~-Las~S~d 157 (485)
+...|.+++++++.++-.+ .+++.+||.+..+.....|.. +...++ +.+++ |||+. |+.++.
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~- 99 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALP-APWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF- 99 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSC-TTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT-
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCC-CCccccccccccCCccceeeeecCCCeEEEEEEC-
Confidence 3456888888866554444 488999999655666667766 444556 66565 99999 776441
Q ss_pred cCCCCcccceeEEEEeEec--c-CCcCcccceeeec---cccCceEEEEeCCCCeEEEEeeCC----------CcEEEee
Q 011452 158 ASDNFSSLRCRSTRIEYIR--R-GKPDAGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQD----------SIYKVFD 221 (485)
Q Consensus 158 ~~~d~stL~~~t~~lw~i~--~-G~~~~~~~lf~~~---~~~~~~~V~Fs~pnG~~Las~s~D----------~tiKlWd 221 (485)
. + ..+.++++. . |+. .+|.... +...+..++|+ |||+.|++++.| .+|++||
T Consensus 100 ~--~------~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~~s-pDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 100 G--D------QRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADPVLL-PERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp T--T------CCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEEEEE-TTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred C--C------CeEEEEcCCCCCCCCC---EeccCCccCCCCccccCcEEC-CCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 1 2 234444433 1 443 2222211 12345578998 899999999887 6899999
Q ss_pred cCC------CeEEEEE-c-CCcEEEEEEcCCceEEEEEcCCC------CeeEEEEecC-CC---eEEEEeecCCcceeEE
Q 011452 222 LKN------YTMLYSI-S-DKNVQEIKISPGIMLLIFTKASG------HVPLKILSIE-DG---TVLKSFNHLLHRNKKV 283 (485)
Q Consensus 222 l~~------g~~l~tl-~-~~~V~~VafSpg~~ll~sss~~~------D~tIklWdi~-tG---~~L~tl~~~~~~~~~V 283 (485)
+.+ ++..... . ...+..++|||++..+++.+.+. ..+|.+||++ +| +......+|...+..+
T Consensus 168 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~ 247 (662)
T 3azo_A 168 LDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQA 247 (662)
T ss_dssp TTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEE
T ss_pred CCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcce
Confidence 988 6643222 2 34688899999776655544332 2689999999 68 5555555666788899
Q ss_pred EEEecCCCEEEEEeCCC--cEEEEECCCCeeEEecccCCCc--------eEEEEEcCCCcEEEEEeCCcEEEE--eCCCc
Q 011452 284 DFIEQFNEKLLVKQENE--NLQILDVRNFELTEVSRTEFMT--------PSAFIFLYENQLFLTFRNRTVAVW--NFRGE 351 (485)
Q Consensus 284 ~f~~~~~~~lls~s~D~--tIkIWDv~tg~~~~~l~gh~~~--------v~avaFspdg~llaS~sD~TIklW--d~~G~ 351 (485)
+|+ |++..++++..|+ +|.+||+.++++.+...+|... +..++|+|++++++++++++++|| |+++.
T Consensus 248 ~~s-pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 326 (662)
T 3azo_A 248 EWA-PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESG 326 (662)
T ss_dssp EEC-TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTT
T ss_pred EEC-CCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCC
Confidence 997 6777555556777 6666677788887776655443 568999999999998877899999 66656
Q ss_pred EEEEeecCCCCCCCCCeeEEEECCCCCEEE--EEecCCCCCCCCcCCCC--eEEEEeCCCCeEEEEecCCC
Q 011452 352 LVTSFEDHLLWHPDCNTNNIYITSDQDLII--SYCKADSDDPLAEGNAG--SINISNILTGKCLAKIRASN 418 (485)
Q Consensus 352 ll~tl~gH~~~~~~~~v~svafSpDG~~La--S~s~d~~~d~~~~~~Dg--tIklWdl~TGk~l~tl~gH~ 418 (485)
.++.|..|... +..+. ++||+.++ +++. +. .|.+||+.+|++......|.
T Consensus 327 ~~~~l~~~~~~-----~~~~~-s~~~~~~~~~~~~~-----------~~~~~i~~~d~~~g~~~~l~~~~~ 380 (662)
T 3azo_A 327 ELVDAAGPWTE-----WAATL-TVSGTRAVGVAASP-----------RTAYEVVELDTVTGRARTIGARHT 380 (662)
T ss_dssp EEEECCSSCCE-----EEEEE-EEETTEEEEEEEET-----------TEEEEEEEEETTTCCEEEEESCCC
T ss_pred cEEEecCCCCe-----EEEEE-ecCCCEEEEEEcCC-----------CCCCEEEEEECCCCceEEeecCCc
Confidence 68889888654 66662 45555433 3332 33 56666777888655444543
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.90 E-value=8.1e-21 Score=187.81 Aligned_cols=245 Identities=13% Similarity=0.084 Sum_probs=187.6
Q ss_pred ccCceEEEEeCCCCeEEEEeeCC------------------------CcEEEeecCCCeEEEEEcC---CcEEEEEEcCC
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQD------------------------SIYKVFDLKNYTMLYSISD---KNVQEIKISPG 244 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D------------------------~tiKlWdl~~g~~l~tl~~---~~V~~VafSpg 244 (485)
+..+..|+|+ |+|+++++.+.+ ++|.+||.++|+++..+.. .....|+|+|+
T Consensus 23 l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 4567789998 799999998877 4799999999998877652 47899999997
Q ss_pred ceEEEEEcCCCCeeEEEEecCCCe--EEEEe---------ecCCcceeEEEEEecCCCEEEEEe-CCCcEEEEECCCCee
Q 011452 245 IMLLIFTKASGHVPLKILSIEDGT--VLKSF---------NHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNFEL 312 (485)
Q Consensus 245 ~~ll~sss~~~D~tIklWdi~tG~--~L~tl---------~~~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~tg~~ 312 (485)
+.++++... +..|++||. +|+ .+.++ .++......|+|.+.++..+++.+ .++.|++|| .+|+.
T Consensus 102 g~l~v~d~~--~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~ 177 (329)
T 3fvz_A 102 GNYWVTDVA--LHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKF 177 (329)
T ss_dssp SCEEEEETT--TTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred CCEEEEECC--CCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCE
Confidence 777777543 479999997 455 67777 344556778999632444445555 699999999 56777
Q ss_pred EEecc----------cCCCceEEEEEcCC-CcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCE
Q 011452 313 TEVSR----------TEFMTPSAFIFLYE-NQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 379 (485)
Q Consensus 313 ~~~l~----------gh~~~v~avaFspd-g~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~ 379 (485)
+..+. ++...+..++|+|+ |+++++.+ +++|++||.+ |+++.++...... ..+.+++|+| |..
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~---~~~~~~~~~p-g~~ 253 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFG---RNVFAISYIP-GFL 253 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTT---TCEEEEEEET-TEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccC---CCcceeeecC-CEE
Confidence 77763 34556999999999 89999988 9999999997 9999998643211 2278999999 555
Q ss_pred EEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCe
Q 011452 380 IISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDI 459 (485)
Q Consensus 380 LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V 459 (485)
+++.+. .-.+.+.+.+|++||+.+|+++.++..... .+..+
T Consensus 254 ~~~~g~----~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~-----------------------------------~~~~p 294 (329)
T 3fvz_A 254 FAVNGK----PYFGDQEPVQGFVMNFSSGEIIDVFKPVRK-----------------------------------HFDMP 294 (329)
T ss_dssp EEEECC----CCTTCSCCCCEEEEETTTCCEEEEECCSSS-----------------------------------CCSSE
T ss_pred EEeCCC----EEeccCCCcEEEEEEcCCCeEEEEEcCCCC-----------------------------------ccCCe
Confidence 555432 223334567999999999999999852110 01378
Q ss_pred EEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 460 TALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 460 ~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
.+|+|+|||+.+++...++.|++|+
T Consensus 295 ~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 295 HDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEEEECTTSEEEEEESSSCCEEEEE
T ss_pred eEEEECCCCCEEEEECCCCEEEEEe
Confidence 8999999999999999999999997
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=4.7e-22 Score=196.33 Aligned_cols=273 Identities=10% Similarity=0.048 Sum_probs=184.4
Q ss_pred cCEEEEEeC-CCe--EEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcC
Q 011452 105 RDIVFALAQ-SGV--CAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD 181 (485)
Q Consensus 105 ~~~ias~s~-dgt--iklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~ 181 (485)
|+.||.++. +|. +.+|++++|+......+ +...+.+++|||||+.|+.++. + +++.+|++..|+.
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~~l~~~~~----~------~~l~~~d~~~g~~- 114 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDDALFYVKD----G------RNLMRVDLATLEE- 114 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSSEEEEEET----T------TEEEEEETTTCCE-
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCCEEEEEeC----C------CeEEEEECCCCcc-
Confidence 898888887 775 77789888887764444 6656667899999999998773 3 5899999988876
Q ss_pred cccceeeeccccCceEE--EEeCCCCeEEEE----------------------eeCCCcEEEeecCCCeEEEEE-cCCcE
Q 011452 182 AGFALFESESLKWPGFV--EFDDVNGKVLTY----------------------SAQDSIYKVFDLKNYTMLYSI-SDKNV 236 (485)
Q Consensus 182 ~~~~lf~~~~~~~~~~V--~Fs~pnG~~Las----------------------~s~D~tiKlWdl~~g~~l~tl-~~~~V 236 (485)
..++.. +..+.... .++ |||+.|+. ...+..|.+||+++|+..... ....+
T Consensus 115 --~~~~~~-~~~~~~~~~~~~~-~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~ 190 (388)
T 3pe7_A 115 --NVVYQV-PAEWVGYGTWVAN-SDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWL 190 (388)
T ss_dssp --EEEEEC-CTTEEEEEEEEEC-TTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCE
T ss_pred --eeeeec-hhhcccccceeEC-CCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccc
Confidence 234443 22333222 345 79999874 235678999999999854433 34579
Q ss_pred EEEEEcC-CceEEEEEcCCC----CeeEEEEecCCCeEEEEeecCCc--ceeEEEEEecCCCEEEEEe-C-CC---cEEE
Q 011452 237 QEIKISP-GIMLLIFTKASG----HVPLKILSIEDGTVLKSFNHLLH--RNKKVDFIEQFNEKLLVKQ-E-NE---NLQI 304 (485)
Q Consensus 237 ~~VafSp-g~~ll~sss~~~----D~tIklWdi~tG~~L~tl~~~~~--~~~~V~f~~~~~~~lls~s-~-D~---tIkI 304 (485)
..++||| ++..+++.+... ...|.++|+.+++ ++.+..+.. .+..++|+ |++.+|+..+ . +. +|.+
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~ 268 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWV-PDGSALVYVSYLKGSPDRFIYS 268 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEEC-TTSSCEEEEEEETTCCCEEEEE
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceEC-CCCCEEEEEecCCCCCcceEEE
Confidence 9999999 887666555432 3478888886654 455554332 45678886 7888887754 2 22 4999
Q ss_pred EECCCCeeEEe--cccCCCc---eEEEEEcCCCcEEEEE---------e-CCcEEEEeCCCcEEEEeecCCC-CC-----
Q 011452 305 LDVRNFELTEV--SRTEFMT---PSAFIFLYENQLFLTF---------R-NRTVAVWNFRGELVTSFEDHLL-WH----- 363 (485)
Q Consensus 305 WDv~tg~~~~~--l~gh~~~---v~avaFspdg~llaS~---------s-D~TIklWd~~G~ll~tl~gH~~-~~----- 363 (485)
||+.+++.... +.++... +..++|+|||+.|+.. . +..|.+||+++..++.+..|.. |.
T Consensus 269 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~ 348 (388)
T 3pe7_A 269 ADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGD 348 (388)
T ss_dssp ECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTB
T ss_pred EecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccc
Confidence 99999985443 3331111 1123799999988853 4 6799999998555667777764 10
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeC
Q 011452 364 PDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNI 405 (485)
Q Consensus 364 ~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl 405 (485)
....+..++|||||++|+..+. .++...||.+
T Consensus 349 ~~~~~~~~~~spDg~~l~~~s~----------~~g~~~l~~~ 380 (388)
T 3pe7_A 349 RQVTHPHPSFTPDDKQILFTSD----------VHGKPALYLA 380 (388)
T ss_dssp SSTTCCCCEECTTSSEEEEEEC----------TTSSCEEEEE
T ss_pred cccCCCCccCCCCCCEEEEEec----------CCCceeEEEE
Confidence 0002678999999999998875 2577777754
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.89 E-value=9e-21 Score=191.62 Aligned_cols=279 Identities=11% Similarity=0.087 Sum_probs=191.2
Q ss_pred CCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee--c
Q 011452 113 QSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES--E 190 (485)
Q Consensus 113 ~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~--~ 190 (485)
.|+++.+||.++|+.+.++.. +..+ .++|||||+.|.+++...+.....=.-.++.+||+.+++..+..++-.. .
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPT-AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEEC-CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred ccCeEEEEECCCCeEEEEecC-CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 478999999999999998876 3434 8999999999998764211100000015899999888776432222100 0
Q ss_pred cccCceEEEEeCCCCeEEEEeeC--CCcEEEeecCCCeEEEE-EcCCcEEEEEEcCCc-eEEEEEcCCCCeeEEEEecCC
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYS-ISDKNVQEIKISPGI-MLLIFTKASGHVPLKILSIED 266 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~--D~tiKlWdl~~g~~l~t-l~~~~V~~VafSpg~-~ll~sss~~~D~tIklWdi~t 266 (485)
...+|..++|+ |||++|..+.. +++|.|||+++++.+.+ +.....+.+.+.|.+ ..+++.+ .|+.+.+|++++
T Consensus 106 ~g~~p~~i~~s-pdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~--~dg~~~~v~~~~ 182 (361)
T 2oiz_A 106 GLNYDGLFRQT-TDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC--GDGGLLTINLGE 182 (361)
T ss_dssp BCCCGGGEEEC-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE--TTSSEEEEEECT
T ss_pred cCCCcceEEEC-CCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC--CCCcEEEEEECC
Confidence 12467789998 89999877753 68999999999999998 765455667788743 3333333 347888998865
Q ss_pred -CeEEEEe------ecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCee--EEecc------cCCC----ceEEEE
Q 011452 267 -GTVLKSF------NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFEL--TEVSR------TEFM----TPSAFI 327 (485)
Q Consensus 267 -G~~L~tl------~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~--~~~l~------gh~~----~v~ava 327 (485)
|+++... ....+.+ .+.+. +++..++..+.+++|.++|+..+.. ..... .+.. ....++
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~-~~~~~-~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPI-FIAPA-LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCB-CSCCE-ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred CCcEeeeccccceEcCCCCce-EEEec-ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE
Confidence 7776322 1111111 22233 5567777777889999999986542 22110 0111 111278
Q ss_pred EcCCCcEEEEE-e-C----------CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCc
Q 011452 328 FLYENQLFLTF-R-N----------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAE 394 (485)
Q Consensus 328 Fspdg~llaS~-s-D----------~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~ 394 (485)
|+||++.+..+ . + .+|.+||+. ++.+.++..|. .++|+|||||++|++++
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-------p~~ia~spdg~~l~v~n---------- 323 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-------ALSMTIDQQRNLMLTLD---------- 323 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-------CCEEEEETTTTEEEEEC----------
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-------eeEEEECCCCCEEEEeC----------
Confidence 99996655543 3 2 389999996 99999999876 36999999999999875
Q ss_pred CCCCeEEEEeCCCC--eEEEEecCCC
Q 011452 395 GNAGSINISNILTG--KCLAKIRASN 418 (485)
Q Consensus 395 ~~DgtIklWdl~TG--k~l~tl~gH~ 418 (485)
+++|.+||..|| ++++++.++.
T Consensus 324 --~~~v~v~D~~t~~l~~~~~i~~~G 347 (361)
T 2oiz_A 324 --GGNVNVYDISQPEPKLLRTIEGAA 347 (361)
T ss_dssp --SSCEEEEECSSSSCEEEEEETTSC
T ss_pred --CCeEEEEECCCCcceeeEEeccCC
Confidence 389999999999 9999986654
No 170
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=7.6e-22 Score=204.99 Aligned_cols=208 Identities=8% Similarity=0.042 Sum_probs=158.5
Q ss_pred ceEEEEeCCCCeEEEEeeCCCcEEEeecCCC-----------eEE-----EEEc-CCcEEEEEEcCCceEEEEE--cCCC
Q 011452 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY-----------TML-----YSIS-DKNVQEIKISPGIMLLIFT--KASG 255 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g-----------~~l-----~tl~-~~~V~~VafSpg~~ll~ss--s~~~ 255 (485)
...++++ +++.+|+.++.|+ ++||+.... ... .+++ ...|.+|+|||++.+++.+ +.+.
T Consensus 39 ~n~lavs-~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 39 SSLLAVS-NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CBCEEEE-TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred ccEEEEe-cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 3478998 6778888888887 999875311 111 1222 3469999999866665521 2456
Q ss_pred CeeEEEEecCCC--------e---EEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceE
Q 011452 256 HVPLKILSIEDG--------T---VLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPS 324 (485)
Q Consensus 256 D~tIklWdi~tG--------~---~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~ 324 (485)
|++|+|||++++ + .++.+.+|...+..|+|++..+..|++++.|++|+|||+++++++....+|...|.
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence 799999999876 2 35677788899999999844467888899999999999999988777778999999
Q ss_pred EEEEcCCCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCC--CCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEE
Q 011452 325 AFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHP--DCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSIN 401 (485)
Q Consensus 325 avaFspdg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~--~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIk 401 (485)
+++|+|+|++|++++ |++|++||.+|+...++..|...+. ...|.+++|++++.++++++..+... .....++
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~----~~~~~v~ 272 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL----ETSPDVV 272 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCS----SSCCEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCcc----CCCCceE
Confidence 999999999999999 9999999999888888887754321 11389999999999999887521000 0113599
Q ss_pred EEeCCCC
Q 011452 402 ISNILTG 408 (485)
Q Consensus 402 lWdl~TG 408 (485)
+|++...
T Consensus 273 i~~l~~~ 279 (434)
T 2oit_A 273 MALLPKK 279 (434)
T ss_dssp EEECCCT
T ss_pred EEEeccC
Confidence 9999754
No 171
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.1e-22 Score=207.03 Aligned_cols=213 Identities=9% Similarity=-0.005 Sum_probs=158.6
Q ss_pred CcEEEeecCCCeEEEEEcCCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCC----------eEEEEee-----cCCc
Q 011452 215 SIYKVFDLKNYTMLYSISDKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDG----------TVLKSFN-----HLLH 278 (485)
Q Consensus 215 ~tiKlWdl~~g~~l~tl~~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG----------~~L~tl~-----~~~~ 278 (485)
+.||+|+... . +....++.+++|| ++.++++ .. |+ ++||+...- ..+..+. .|..
T Consensus 23 ~~vri~~~~~-~----~~~~~~n~lavs~~~~~l~~~-~~--dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPE-E----LPKERSSLLAVSNKYGLVFAG-GA--SG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF 93 (434)
T ss_dssp CEEECSCCCS-S----CCCSCCBCEEEETTTTEEEEE-ET--TE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred eeEEecCCcc-c----cCCCCccEEEEecCCCEEEEE-CC--CE-EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence 5789987532 1 3345688899997 4555444 33 24 999875311 0111111 2345
Q ss_pred ceeEEEEEecCCCEEE----EEeCCCcEEEEECCCC--------e---eEEecccCCCceEEEEEcCC-CcEEEEEe-CC
Q 011452 279 RNKKVDFIEQFNEKLL----VKQENENLQILDVRNF--------E---LTEVSRTEFMTPSAFIFLYE-NQLFLTFR-NR 341 (485)
Q Consensus 279 ~~~~V~f~~~~~~~ll----s~s~D~tIkIWDv~tg--------~---~~~~l~gh~~~v~avaFspd-g~llaS~s-D~ 341 (485)
.+..|+|+ +++..|+ +++.|++|+|||++++ + .+..+.+|...|.+++|+|+ +++|||++ |+
T Consensus 94 ~v~~l~~s-pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALS-CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEEC-TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred cccEEEEc-CCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 68899997 6788888 5679999999999765 1 25677889999999999998 89999999 99
Q ss_pred cEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCC
Q 011452 342 TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGL 420 (485)
Q Consensus 342 TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~ 420 (485)
+|+|||++ ++.+....+|... |.+++|+|||++||+|+. ||+|+|||+. ++...++..|...
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~-----v~~v~wspdg~~lasgs~-----------dg~v~iwd~~-~~~~~~~~~~~~~ 235 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVA-----VTSVCWSPKGKQLAVGKQ-----------NGTVVQYLPT-LQEKKVIPCPPFY 235 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGC-----EEEEEECTTSSCEEEEET-----------TSCEEEECTT-CCEEEEECCCTTC
T ss_pred eEEEEEcCCCcceeeccCCCCc-----eeEEEEcCCCCEEEEEcC-----------CCcEEEEccC-CcccccccCCccc
Confidence 99999996 8777778888766 999999999999999997 7999999998 8888888877520
Q ss_pred CCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEE-ecCCCc------EEEccC
Q 011452 421 PAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYT-GNRHGL------VHVWSN 485 (485)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaS-gs~Dgt------VklWd~ 485 (485)
. + .+...|.+++|+|++..+++ ++.||. +++|++
T Consensus 236 ~--------------------~-----------~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 236 E--------------------S-----------DHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp C--------------------T-----------TSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred C--------------------C-----------CCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEe
Confidence 0 0 00027899999999998854 334533 889974
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.87 E-value=1.1e-19 Score=177.09 Aligned_cols=271 Identities=11% Similarity=0.090 Sum_probs=186.7
Q ss_pred eEEEEEecCEEEEEe---------CCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCccccee
Q 011452 98 IIEIVAARDIVFALA---------QSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCR 168 (485)
Q Consensus 98 V~~i~~s~~~ias~s---------~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~ 168 (485)
|.+..+.|+.||... .++.+.+|++++|+.. .| ..+.+++|||||+.||.++..+... -.
T Consensus 17 ~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l-----~~~~~~~~SpDg~~la~~~~~~~~~-----~~ 85 (347)
T 2gop_A 17 LSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI-----ENATMPRISPDGKKIAFMRANEEKK-----VS 85 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE-----ESCEEEEECTTSSEEEEEEEETTTT-----EE
T ss_pred cccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec-----ccCCCeEECCCCCEEEEEEeccCCC-----cc
Confidence 344444666666542 3678999999988754 34 3578999999999999988643211 13
Q ss_pred EEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC---------------------------CcEEEee
Q 011452 169 STRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD---------------------------SIYKVFD 221 (485)
Q Consensus 169 t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D---------------------------~tiKlWd 221 (485)
.+.++++..|+. ..+.... . +..++|+ |||+.|++++.+ ..|.+||
T Consensus 86 ~l~~~~~~~g~~---~~l~~~~--~-~~~~~ws-pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 86 EIWVADLETLSS---KKILEAK--N-IRSLEWN-EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp EEEEEETTTTEE---EEEEEES--E-EEEEEEC-TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred eEEEEECCCCce---EEEEcCC--C-ccceeEC-CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 566777766665 2344432 2 6689998 799999998743 5799999
Q ss_pred cCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCCCC----e-eEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEE
Q 011452 222 LKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGH----V-PLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK 296 (485)
Q Consensus 222 l~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~~D----~-tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~ 296 (485)
+.+++.+..+....+..++|||++ ++.++..+.+ . ..+||.+.+|++ +.+..+ ..+..+ .|++.+|+..
T Consensus 159 ~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~---spdg~~l~~~ 232 (347)
T 2gop_A 159 TESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV---DSDGERILLY 232 (347)
T ss_dssp TTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE---EECSSCEEEE
T ss_pred CCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE---CCCCCEEEEE
Confidence 999987443321278899999988 6655443321 2 345554446664 444433 333333 4788888887
Q ss_pred eCC--------CcEEEEECCCCeeEEecccCCCceEE-EEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCC
Q 011452 297 QEN--------ENLQILDVRNFELTEVSRTEFMTPSA-FIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPD 365 (485)
Q Consensus 297 s~D--------~tIkIWDv~tg~~~~~l~gh~~~v~a-vaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~ 365 (485)
+.+ ..|.+|| +++..+...+|...+.. ++|+ || ++++++ |++++|| ++ |++...+. +...
T Consensus 233 ~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~-~~~~--- 303 (347)
T 2gop_A 233 GKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK-GRHW--- 303 (347)
T ss_dssp ECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEEC-SSSE---
T ss_pred EccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec-CCCe---
Confidence 633 4688888 78877777777788886 8999 98 888888 9999999 85 87755443 4434
Q ss_pred CCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCe-EEEEeCCCCeEEEEecCCC
Q 011452 366 CNTNNIYITSDQDLIISYCKADSDDPLAEGNAGS-INISNILTGKCLAKIRASN 418 (485)
Q Consensus 366 ~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dgt-IklWdl~TGk~l~tl~gH~ 418 (485)
|.+++|+| .++++++. +++ .+||.+. |+ +..|..|+
T Consensus 304 --v~~~~~s~--~~~~~~~~-----------~~~~~~l~~~~-g~-~~~lt~~n 340 (347)
T 2gop_A 304 --IMGFDVDE--IVVYLKET-----------ATRLRELFTWD-GE-EKQLTDYN 340 (347)
T ss_dssp --EEEEEESS--SEEEEEEC-----------SSSCCEEEEES-SS-EEECCCTT
T ss_pred --EEeeeeeC--cEEEEEcC-----------CCChHHheEeC-Cc-EEEecccc
Confidence 89999999 78888775 344 3788776 76 55688776
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.87 E-value=2.3e-19 Score=174.83 Aligned_cols=266 Identities=11% Similarity=0.098 Sum_probs=183.4
Q ss_pred ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC--
Q 011452 137 EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-- 214 (485)
Q Consensus 137 ~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D-- 214 (485)
..+.++.+ ||+.|+.+....... ..-....+.+|++..|+. ..+ ..+..++|+ |||+.||+.+.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~-~~~~~~~l~~~d~~~~~~---~~l------~~~~~~~~S-pDg~~la~~~~~~~ 81 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLK-DNKYENTIVIENLKNNAR---RFI------ENATMPRIS-PDGKKIAFMRANEE 81 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETT-TTEEEEEEEEEETTTCCE---EEE------ESCEEEEEC-TTSSEEEEEEEETT
T ss_pred EEcccceE--CCcEEEEEEeecCcc-cCCccceEEEEeCCCCce---EEc------ccCCCeEEC-CCCCEEEEEEeccC
Confidence 35777788 999998865432110 001125778888877765 122 345578998 899999998754
Q ss_pred -C--cEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCC-------------------------CCeeEEEEecCC
Q 011452 215 -S--IYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKAS-------------------------GHVPLKILSIED 266 (485)
Q Consensus 215 -~--tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~-------------------------~D~tIklWdi~t 266 (485)
+ .|.+||+.+++.........|..++|||++..+++.+.+ ....|.+||+.+
T Consensus 82 ~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 82 KKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp TTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred CCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 2 377888988886544332229999999876544444321 136899999999
Q ss_pred CeEEEEeecCCcceeEEEEEecCCCEEEEEeCC------C-cEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe
Q 011452 267 GTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQEN------E-NLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 267 G~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D------~-tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s 339 (485)
|++++.+.. . .+..++|+ |++ .++++..+ . ..+||.+.++++..... + ..+.++ +|||+.|+..+
T Consensus 162 ~~~~~~l~~-~-~~~~~~~s-pdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~-~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 162 EEVIEEFEK-P-RFSSGIWH-RDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFE-K-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp TEEEEEEEE-E-TTCEEEEE-TTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEE-E-ESEEEE--EECSSCEEEEE
T ss_pred CeEEeeecC-C-CcccccCC-CCe-EEEEEecccccccccccccEEEeCCCceEEecc-C-cceeeE--CCCCCEEEEEE
Confidence 988677765 3 67789997 666 55555543 2 55666555777655443 4 455554 99999988776
Q ss_pred -CC--------cEEEEeCCCcEEEEeecCCCCCCCCCeeE-EEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe
Q 011452 340 -NR--------TVAVWNFRGELVTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK 409 (485)
Q Consensus 340 -D~--------TIklWd~~G~ll~tl~gH~~~~~~~~v~s-vafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk 409 (485)
+. .|.+|| .|++...+.+|... +.+ ++|+ || ++++++. +++++|| +.+|+
T Consensus 234 ~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~-----~~~~~~~s-dg-~~~~~~~-----------~~~~~l~-~~~g~ 293 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD-GKEVMGILDEVDRG-----VGQAKIKD-GK-VYFTLFE-----------EGSVNLY-IWDGE 293 (347)
T ss_dssp CCSSSCCCSSCEEEEEC-SSCEEESSTTCCSE-----EEEEEEET-TE-EEEEEEE-----------TTEEEEE-EESSS
T ss_pred ccccCCccccceEEEEC-CCceEeccccCCcc-----cCCccEEc-Cc-EEEEEec-----------CCcEEEE-EcCCc
Confidence 43 677888 77776655666544 776 9999 99 9998886 6899999 88888
Q ss_pred EEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcE-EEcc
Q 011452 410 CLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLV-HVWS 484 (485)
Q Consensus 410 ~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtV-klWd 484 (485)
+...+ .+. ..|.+++|+| ..+++++.+++. +||.
T Consensus 294 ~~~~~-~~~--------------------------------------~~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 294 IKPIA-KGR--------------------------------------HWIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp EEEEE-CSS--------------------------------------SEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred eEEEe-cCC--------------------------------------CeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 75544 333 2789999999 788888887765 7874
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=5.5e-19 Score=168.61 Aligned_cols=237 Identities=11% Similarity=0.185 Sum_probs=178.8
Q ss_pred cccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-----ccccCceEEEEeCCCCeEEEE
Q 011452 136 DEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-----ESLKWPGFVEFDDVNGKVLTY 210 (485)
Q Consensus 136 ~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-----~~~~~~~~V~Fs~pnG~~Las 210 (485)
-....+|+++|+|+.+++.+ .+ +.+.+|+. .|+.. ..|.. .++..|..++|++++|.++++
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~----~~------~~i~~~d~-~g~~~---~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~ 94 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADT----NN------HRIQIFDK-EGRFK---FQFGECGKRDSQLLYPNRVAVVRNSGDIIVT 94 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEG----GG------TEEEEECT-TSCEE---EEECCBSSSTTCBSSEEEEEEETTTTEEEEE
T ss_pred cCCCceEEECCCCCEEEEEC----CC------CEEEEECC-CCcEE---EEecccCCCcccccCceEEEEEcCCCeEEEE
Confidence 34689999999999776633 23 47888985 46652 12221 234567789996579998888
Q ss_pred eeC-CCcEEEeecCCCeEEEEEcC---CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEee--cCCcceeEEE
Q 011452 211 SAQ-DSIYKVFDLKNYTMLYSISD---KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFN--HLLHRNKKVD 284 (485)
Q Consensus 211 ~s~-D~tiKlWdl~~g~~l~tl~~---~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~--~~~~~~~~V~ 284 (485)
... ++.|++|| .+++.+.++.. ..+..|+|+|++.++++... +..|.+||. +|+.+.++. ++......|+
T Consensus 95 ~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 95 ERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK--VMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVV 170 (286)
T ss_dssp ECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT--TTEEEEECT-TSCEEEEEECTTTCSSEEEEE
T ss_pred cCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECC--CCEEEEEcC-CCCEEEEeCCCCccCCcEEEE
Confidence 754 89999999 67888777742 47899999997777776543 379999995 688888885 3445677899
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc--CCCceEEEEEcCCCcEEEEEe-CC-cEEEEeCCCcEEEEeecCC
Q 011452 285 FIEQFNEKLLVKQENENLQILDVRNFELTEVSRT--EFMTPSAFIFLYENQLFLTFR-NR-TVAVWNFRGELVTSFEDHL 360 (485)
Q Consensus 285 f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g--h~~~v~avaFspdg~llaS~s-D~-TIklWd~~G~ll~tl~gH~ 360 (485)
|. +++..+++...++.|++||.. ++.+..+.. +...+..++|+|+|+++++.. ++ +|.+||.+|+.+.++..|.
T Consensus 171 ~~-~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~ 248 (286)
T 1q7f_A 171 VN-DKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV 248 (286)
T ss_dssp EC-SSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS
T ss_pred EC-CCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccC
Confidence 86 445444444689999999985 566665543 457899999999999999998 75 9999999999999998765
Q ss_pred CCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 361 LWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 361 ~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
.. ....+++|+|||+++++ +. |++|++|++..
T Consensus 249 ~~---~~~~~i~~~~~g~l~vs-~~-----------~~~v~v~~~~~ 280 (286)
T 1q7f_A 249 KH---AQCFDVALMDDGSVVLA-SK-----------DYRLYIYRYVQ 280 (286)
T ss_dssp CC---SCEEEEEEETTTEEEEE-ET-----------TTEEEEEECSC
T ss_pred CC---CcceeEEECCCCcEEEE-CC-----------CCeEEEEEccc
Confidence 32 12679999999998888 44 69999999764
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=3e-19 Score=176.51 Aligned_cols=239 Identities=9% Similarity=0.088 Sum_probs=185.7
Q ss_pred ccceEEEEEe--cCEEEEEeCC------------------------CeEEeeecccCcEEEEeecCCcccEEEEEEeeCC
Q 011452 95 RSKIIEIVAA--RDIVFALAQS------------------------GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNN 148 (485)
Q Consensus 95 ~s~V~~i~~s--~~~ias~s~d------------------------gtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg 148 (485)
-..|..|+++ |+++++.+.+ +++.+||.++|+.+..+...+-.....|+++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3568899998 8899888888 5899999999999887654455578999999999
Q ss_pred CEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceee--------eccccCceEEEEeCCCCeEEEEee-CCCcEEE
Q 011452 149 DSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFE--------SESLKWPGFVEFDDVNGKVLTYSA-QDSIYKV 219 (485)
Q Consensus 149 ~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~--------~~~~~~~~~V~Fs~pnG~~Las~s-~D~tiKl 219 (485)
+.+++.+ .+ +.+.+|+. .|+... ...+. ...+..|..|+|++.+|.++++.+ .++.|++
T Consensus 103 ~l~v~d~----~~------~~v~~~~~-~g~~~~-~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 103 NYWVTDV----AL------HQVFKLDP-HSKEGP-LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ 170 (329)
T ss_dssp CEEEEET----TT------TEEEEECT-TCSSCC-SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEE
T ss_pred CEEEEEC----CC------CEEEEEeC-CCCeEE-EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEE
Confidence 9776532 23 48888984 665210 11121 234567889999833899999997 7999999
Q ss_pred eecCCCeEEEEEc--C----------CcEEEEEEcCC-ceEEEEEcCCCCeeEEEEecCCCeEEEEee--cCCcceeEEE
Q 011452 220 FDLKNYTMLYSIS--D----------KNVQEIKISPG-IMLLIFTKASGHVPLKILSIEDGTVLKSFN--HLLHRNKKVD 284 (485)
Q Consensus 220 Wdl~~g~~l~tl~--~----------~~V~~VafSpg-~~ll~sss~~~D~tIklWdi~tG~~L~tl~--~~~~~~~~V~ 284 (485)
|| .+|+.+.++. + .....|+|+|+ +.++++... +..|++||.++|+.+.++. .+......++
T Consensus 171 ~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 171 FS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--NGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT--TTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred Ec-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC--CCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 99 6788887774 1 23899999986 888887654 4799999999999999995 3445677888
Q ss_pred EEecCCCEEEEE-e-------CCCcEEEEECCCCeeEEec---ccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCCCc
Q 011452 285 FIEQFNEKLLVK-Q-------ENENLQILDVRNFELTEVS---RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGE 351 (485)
Q Consensus 285 f~~~~~~~lls~-s-------~D~tIkIWDv~tg~~~~~l---~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~G~ 351 (485)
|. | +.++.. + .+.+|++||+.+|+++.++ .+|...+..++|+|||+++++.+ +++|++|+++|+
T Consensus 248 ~~-p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 248 YI-P--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EE-T--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred ec-C--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 87 4 333332 2 4569999999999999987 47888999999999999999998 999999998653
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=1.5e-19 Score=182.60 Aligned_cols=266 Identities=14% Similarity=0.120 Sum_probs=183.3
Q ss_pred eeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEee----------CCCcEEEeecCCCeEEEEEc----
Q 011452 167 CRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QDSIYKVFDLKNYTMLYSIS---- 232 (485)
Q Consensus 167 ~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s----------~D~tiKlWdl~~g~~l~tl~---- 232 (485)
-.++.+||..+|++.. .+..+ ..+ .++|+ |||++|..+. .|++|.+||+.+++.+.++.
T Consensus 30 d~~v~v~D~~t~~~~~---~i~~g--~~p-~i~~s-pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLG---MVPTA--FNG-HVQVS-NDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GCEEEEEETTTCCEEE---EEECC--EEE-EEEEC-TTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred cCeEEEEECCCCeEEE---EecCC--CCC-ceEEC-CCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 3689999988888732 22222 234 89998 7999888775 37889999999999888774
Q ss_pred ----CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEE-eecCCcceeEEEEEecCC-CEEEEEeCCCcEEEEE
Q 011452 233 ----DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS-FNHLLHRNKKVDFIEQFN-EKLLVKQENENLQILD 306 (485)
Q Consensus 233 ----~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~t-l~~~~~~~~~V~f~~~~~-~~lls~s~D~tIkIWD 306 (485)
+.....++|||++..|..+....+.+|.+||+++++.+.+ +.. +....+.+. |++ ..+++.+.|+++.+|+
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~~~v~~~-p~~~~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGCWSVIPQ-PNRPRSFMTICGDGGLLTIN 179 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTEEEEEEC-TTSSSEEEEEETTSSEEEEE
T ss_pred ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCcceeEEc-CCCCeeEEEECCCCcEEEEE
Confidence 2346689999877655544433358999999999999998 663 223345554 444 4666678999999999
Q ss_pred CCC-CeeEE------ecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-Cc--EEEEee------cCCCCCCCCCee
Q 011452 307 VRN-FELTE------VSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE--LVTSFE------DHLLWHPDCNTN 369 (485)
Q Consensus 307 v~t-g~~~~------~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~--ll~tl~------gH~~~~~~~~v~ 369 (485)
+.. ++... ++..+.. +..+.++|++..++..+ +++|.+||+. ++ .+.+++ .+..|.|.+ ..
T Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g-~~ 257 (361)
T 2oiz_A 180 LGEDGKVASQSRSKQMFSVKDD-PIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGG-YN 257 (361)
T ss_dssp ECTTSSEEEEEECCCCSCTTTS-CBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECC-SS
T ss_pred ECCCCcEeeeccccceEcCCCC-ceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCC-ee
Confidence 875 66552 2222222 22345688888888778 9999999996 33 233332 122232222 13
Q ss_pred EEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccc
Q 011452 370 NIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIR 449 (485)
Q Consensus 370 svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (485)
.++|+|||+.|..+......+......+++|.+||+.|++.++++..|.
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~------------------------------- 306 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD------------------------------- 306 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-------------------------------
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-------------------------------
Confidence 4899999888876643000000000024689999999999999998762
Q ss_pred cchhcccCCeEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 450 STVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 450 ~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
+++++|+|||++||+++. ++|.|||.
T Consensus 307 ---------p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 307 ---------ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp ---------CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred ---------eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 568999999999999997 99999983
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=2.5e-20 Score=183.19 Aligned_cols=274 Identities=10% Similarity=0.062 Sum_probs=177.5
Q ss_pred cCEEEEEeCC---CeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcC
Q 011452 105 RDIVFALAQS---GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD 181 (485)
Q Consensus 105 ~~~ias~s~d---gtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~ 181 (485)
|+.||..+.. ..+.+|++.+|+... +...+......++|||||+.|+.++. + .++.+|++..|+.
T Consensus 47 G~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg~~l~~~~~----~------~~l~~~d~~~~~~- 114 (396)
T 3c5m_A 47 GKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDERAFFYVKN----E------LNLMKVDLETLEE- 114 (396)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTSSEEEEEET----T------TEEEEEETTTCCE-
T ss_pred CCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCCCEEEEEEc----C------CcEEEEECCCCCc-
Confidence 8887776543 367888998887654 44434333344889999999988773 2 3788999877775
Q ss_pred cccceeeeccccCceE-------------------EEEeCCCCeEEEEe-----eCCCcEEEeecCCCeEEEEEc-CCcE
Q 011452 182 AGFALFESESLKWPGF-------------------VEFDDVNGKVLTYS-----AQDSIYKVFDLKNYTMLYSIS-DKNV 236 (485)
Q Consensus 182 ~~~~lf~~~~~~~~~~-------------------V~Fs~pnG~~Las~-----s~D~tiKlWdl~~g~~l~tl~-~~~V 236 (485)
..++.. ...|... ++|+ |+|+.++.. ..+..|.+||+.+++...... ...+
T Consensus 115 --~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~s-pdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~ 190 (396)
T 3c5m_A 115 --QVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQ-PLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWL 190 (396)
T ss_dssp --EEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCC-CCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCE
T ss_pred --EEEEec-ccccCCCCCEEEeccCCccccccccccccC-CCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccc
Confidence 223332 1122111 2345 677766654 467789999999988654443 4679
Q ss_pred EEEEEcC-CceEEEEEcCCCC----eeEEEEecCCCeEEEEeecCC--cceeEEEEEecCCCEEEEEeCC-----CcEEE
Q 011452 237 QEIKISP-GIMLLIFTKASGH----VPLKILSIEDGTVLKSFNHLL--HRNKKVDFIEQFNEKLLVKQEN-----ENLQI 304 (485)
Q Consensus 237 ~~VafSp-g~~ll~sss~~~D----~tIklWdi~tG~~L~tl~~~~--~~~~~V~f~~~~~~~lls~s~D-----~tIkI 304 (485)
..++||| ++..+++.+.+.. ..|.+||+.+++. +.+..+. ..+..++|+ |++.+|+..+.+ ++|.+
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWI-PDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEEC-TTSSCEEEEEEETTTCCEEEEE
T ss_pred ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEEC-CCCCEEEEEecCCCCccceEEE
Confidence 9999999 6654444333333 5789999877654 3343321 245678886 788888876533 45999
Q ss_pred EECCCCeeEEecccCCCceEEEEEcC-CCcEEEEEe-----------------CCcEEEEeCC-CcEEEEeecCCC-CC-
Q 011452 305 LDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFR-----------------NRTVAVWNFR-GELVTSFEDHLL-WH- 363 (485)
Q Consensus 305 WDv~tg~~~~~l~gh~~~v~avaFsp-dg~llaS~s-----------------D~TIklWd~~-G~ll~tl~gH~~-~~- 363 (485)
||+.+++........ ... ++|+| ||+++++++ +..|.+||+. |++ ..+..|.. +.
T Consensus 269 ~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~ 344 (396)
T 3c5m_A 269 ANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDV 344 (396)
T ss_dssp ECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCC
T ss_pred EECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCcccc
Confidence 999999765543222 123 88999 999998753 3789999997 554 45665543 10
Q ss_pred ----CCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEE--eCCCCeE
Q 011452 364 ----PDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINIS--NILTGKC 410 (485)
Q Consensus 364 ----~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklW--dl~TGk~ 410 (485)
....+..++|+|||++|+..+.. ++...|| |+.++++
T Consensus 345 ~~~~~~~~~~~~~~s~dg~~l~~~s~~----------~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 345 LDGDRQITHPHPSFTPNDDGVLFTSDF----------EGVPAIYIADVPESYK 387 (396)
T ss_dssp BTTBSSTTCCCCEECTTSSEEEEEECT----------TSSCEEEEEECCTTCC
T ss_pred ccccccCCCCCceEccCCCeEEEEecC----------CCCceEEEEEEccccc
Confidence 00014568999999999988752 3444444 5556554
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.85 E-value=2e-19 Score=191.74 Aligned_cols=285 Identities=7% Similarity=-0.026 Sum_probs=188.0
Q ss_pred eecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCce---------EEEEe
Q 011452 131 LNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPG---------FVEFD 201 (485)
Q Consensus 131 l~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~---------~V~Fs 201 (485)
+.+ |...|.+++|++++ ++.++.....+ ++.+||....+... ..|... . ..+. .+.|+
T Consensus 19 ~~~-~~~~~~~~~~s~~~--~~~~~~~~~~~------~~~~l~~~~~~~~~--~~l~~~-~-~~~~~~~~~~~~~~~~~~ 85 (662)
T 3azo_A 19 VAS-RSGRPACVGAVGDE--VWWVAPRPAEA------GRATLVRRRADGAE--ESALPA-P-WNVRNRVFEYSGFPWAGV 85 (662)
T ss_dssp HHH-TCSCCEEEEEETTE--EEEEEEETTTT------TEEEEEEECTTSCE--EESSCT-T-CCBCCCGGGTCCCCEEEE
T ss_pred Hhh-cCCccceeEEcCCe--EEEEecCcccC------CcEEEEEECCCCCc--ceeCCC-C-ccccccccccCCccceee
Confidence 444 67789999999764 44444422334 47888886333210 112111 1 1111 34565
Q ss_pred C-CCCeE-EEEeeC-CCcEEEeecC--C-CeEEEEEcC-------CcEEEEEEcCCceEEEEEcCC--------CCeeEE
Q 011452 202 D-VNGKV-LTYSAQ-DSIYKVFDLK--N-YTMLYSISD-------KNVQEIKISPGIMLLIFTKAS--------GHVPLK 260 (485)
Q Consensus 202 ~-pnG~~-Las~s~-D~tiKlWdl~--~-g~~l~tl~~-------~~V~~VafSpg~~ll~sss~~--------~D~tIk 260 (485)
. |||+. |+.++. +..|.+|++. + ++ ...+.. ..+.+++|||++..+++.+.+ ...+|+
T Consensus 86 ~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 86 PRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp CCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred eecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 2 89998 887764 4555555654 2 43 344432 368899999977655554432 126899
Q ss_pred EEecCC------CeEEEEee-cCCcceeEEEEEecCCCEEEEEeCC--------CcEEEEECC-CC---eeEEecccCCC
Q 011452 261 ILSIED------GTVLKSFN-HLLHRNKKVDFIEQFNEKLLVKQEN--------ENLQILDVR-NF---ELTEVSRTEFM 321 (485)
Q Consensus 261 lWdi~t------G~~L~tl~-~~~~~~~~V~f~~~~~~~lls~s~D--------~tIkIWDv~-tg---~~~~~l~gh~~ 321 (485)
+||+.+ |+. +.+. .+...+..++|+ |||.+|+..+.| .+|.+||+. +| +......+|..
T Consensus 165 ~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~S-pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~ 242 (662)
T 3azo_A 165 AVPLDGSAAADRSAV-RELSDDAHRFVTGPRLS-PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE 242 (662)
T ss_dssp EEETTSTTTTCGGGS-EESSCSCSSEECCCEEC-TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB
T ss_pred EEECCCCccccCCce-eEEEecCCCcccCceEC-CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc
Confidence 999988 664 4555 444667788996 789899887744 389999999 67 66666667778
Q ss_pred ceEEEEEcCCCcEEEEEe-CC--cEEEEeCC-CcEEEEeecCCC-----CCCCCCeeEEEECCCCCEEEEEecCCCCCCC
Q 011452 322 TPSAFIFLYENQLFLTFR-NR--TVAVWNFR-GELVTSFEDHLL-----WHPDCNTNNIYITSDQDLIISYCKADSDDPL 392 (485)
Q Consensus 322 ~v~avaFspdg~llaS~s-D~--TIklWd~~-G~ll~tl~gH~~-----~~~~~~v~svafSpDG~~LaS~s~d~~~d~~ 392 (485)
.+..++|+|||+++++++ |+ .|.+||+. |++...+.+|.. |.++ +..++|+|||+++++++
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~--~~~~~~~~~~~~~~~~~-------- 312 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPG--MRWFAPLANGLIAVVHG-------- 312 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTT--CCSEEECTTSCEEEEEB--------
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCcccccc--CceEeEeCCCEEEEEEE--------
Confidence 999999999999888888 88 55566664 666554443322 3222 46799999999999875
Q ss_pred CcCCCCeEEEE--eCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEE-EEcCCCC
Q 011452 393 AEGNAGSINIS--NILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITAL-FYDEDRN 469 (485)
Q Consensus 393 ~~~~DgtIklW--dl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl-~fspDg~ 469 (485)
. ++++|| |+.+|+ +.+|..|.. .|.++ ++++++-
T Consensus 313 ---~-~~~~l~~~d~~~~~-~~~l~~~~~--------------------------------------~~~~~~s~~~~~~ 349 (662)
T 3azo_A 313 ---K-GAAVLGILDPESGE-LVDAAGPWT--------------------------------------EWAATLTVSGTRA 349 (662)
T ss_dssp ---S-SSCEEEEEETTTTE-EEECCSSCC--------------------------------------EEEEEEEEETTEE
T ss_pred ---c-CccEEEEEECCCCc-EEEecCCCC--------------------------------------eEEEEEecCCCEE
Confidence 3 788999 766665 788887752 56666 6655555
Q ss_pred EEEEecCCCcEEEcc
Q 011452 470 EIYTGNRHGLVHVWS 484 (485)
Q Consensus 470 ~LaSgs~DgtVklWd 484 (485)
.+++++.+....||.
T Consensus 350 ~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 350 VGVAASPRTAYEVVE 364 (662)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EEEEcCCCCCCEEEE
Confidence 566777777666663
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.84 E-value=4.7e-19 Score=192.77 Aligned_cols=283 Identities=10% Similarity=0.044 Sum_probs=196.6
Q ss_pred cCEEEEEeCCC---eEEeeecc--cCcEEEEee-----cCCcccEEEEEEeeCCCEEEEEEe-ecCCCCcccceeEEEEe
Q 011452 105 RDIVFALAQSG---VCAAFCRE--TNQRICFLN-----VTADEVIRSLFYNKNNDSLITVSV-YASDNFSSLRCRSTRIE 173 (485)
Q Consensus 105 ~~~ias~s~dg---tiklW~~~--tG~~l~tl~-----g~~~~~i~sv~~spdg~~Las~S~-d~~~d~stL~~~t~~lw 173 (485)
|+.++-...++ .-.||-+. .|+.-..+. ..|...+.+++|||||+.||.++. .|+++ .++++|
T Consensus 79 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~------~~i~v~ 152 (695)
T 2bkl_A 79 NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADE------AVLHVI 152 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSC------CEEEEE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCce------EEEEEE
Confidence 77777777655 45667653 344222222 124457999999999999987655 34455 699999
Q ss_pred EeccCCcCcccceeeeccccCc--eEEEEeCCCCeEEEEeeCCCc-------------EEEeecCCCe----EEEEEcC-
Q 011452 174 YIRRGKPDAGFALFESESLKWP--GFVEFDDVNGKVLTYSAQDSI-------------YKVFDLKNYT----MLYSISD- 233 (485)
Q Consensus 174 ~i~~G~~~~~~~lf~~~~~~~~--~~V~Fs~pnG~~Las~s~D~t-------------iKlWdl~~g~----~l~tl~~- 233 (485)
++.+|+... ...+.+. ..++|+ |||+.|++++.|.+ |++|++.+++ +++...+
T Consensus 153 dl~tg~~~~------~~~~~~~~~~~~~ws-pDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~ 225 (695)
T 2bkl_A 153 DVDSGEWSK------VDVIEGGKYATPKWT-PDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD 225 (695)
T ss_dssp ETTTCCBCS------SCCBSCCTTCCCEEC-TTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC
T ss_pred ECCCCCCcC------CcccCcccccceEEe-cCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC
Confidence 999888620 1112222 478998 79999999999887 9999999876 5555544
Q ss_pred -CcEEEEEEcCCceEEEEEcCC--CCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEe----CCCcEEEEE
Q 011452 234 -KNVQEIKISPGIMLLIFTKAS--GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ----ENENLQILD 306 (485)
Q Consensus 234 -~~V~~VafSpg~~ll~sss~~--~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s----~D~tIkIWD 306 (485)
..+.+++|||++..++..+.+ ....|.+|+..+|+ ++.+..+...+....+ ++++ +++.+ .++.|.+||
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~--~~g~-l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA--WKDR-FYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE--ETTE-EEEEECTTCTTCEEEEEB
T ss_pred CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe--cCCc-EEEEECCCCCCCEEEEEe
Confidence 478999999866544443322 23578888877775 4555555555555555 4566 66654 368999999
Q ss_pred CCCCee---EEecccC-CCceEEEEEcCCCcEEEEEe-CCcEEEEeC--CCcEEEEeecC-CCCCCCCCeeEEEECCCCC
Q 011452 307 VRNFEL---TEVSRTE-FMTPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDH-LLWHPDCNTNNIYITSDQD 378 (485)
Q Consensus 307 v~tg~~---~~~l~gh-~~~v~avaFspdg~llaS~s-D~TIklWd~--~G~ll~tl~gH-~~~~~~~~v~svafSpDG~ 378 (485)
+.+++. ...+.++ ...+..++|+ +++++++.+ |++.+||.+ +|+.++.+..+ ... |..++++|||+
T Consensus 302 ~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~-----v~~~~~s~d~~ 375 (695)
T 2bkl_A 302 PAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGA-----ASNLMGLEDLD 375 (695)
T ss_dssp TTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSE-----ECCCBSCTTCS
T ss_pred CCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeE-----EEEeecCCCCC
Confidence 998763 4444444 5568889998 888999998 999999876 48888888765 333 78899999998
Q ss_pred EEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 379 LIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 379 ~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
.|+-...+ ....++|.+||+.+|+ +..|+.+.
T Consensus 376 ~l~~~~ss-------~~~P~~v~~~d~~~g~-~~~l~~~~ 407 (695)
T 2bkl_A 376 DAYYVFTS-------FTTPRQIYKTSVSTGK-SELWAKVD 407 (695)
T ss_dssp EEEEEEEE-------TTEEEEEEEEETTTCC-EEEEEECC
T ss_pred EEEEEEcC-------CCCCCEEEEEECCCCc-EEEEecCC
Confidence 77733221 1235899999999988 45666654
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=1.1e-17 Score=182.22 Aligned_cols=257 Identities=12% Similarity=0.047 Sum_probs=184.1
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecC-CCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeC
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYAS-DNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQ 213 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~-~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~ 213 (485)
+...+.+++|||||+.||.++..++ +. .++++|++.+|+... + ..... .+..++|+ |||+.|++++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~------~~i~v~d~~tg~~~~---~-~~~~~-~~~~~~ws-pDg~~l~~~~~ 190 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDW------VTIKFMKVDGAKELP---D-VLERV-KFSCMAWT-HDGKGMFYNAY 190 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSC------EEEEEEETTTTEEEE---E-EEEEE-CSCCEEEC-TTSSEEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCce------EEEEEEECCCCCCCc---c-cccCc-ccceEEEE-eCCCEEEEEEE
Confidence 4446899999999999998776433 33 489999998887622 1 11111 14579998 79999999998
Q ss_pred CCc----------------EEEeecCCCe----EEEEEcC--CcEEEEEEcCCceEEEEEcC-CC--CeeEEEEecCC--
Q 011452 214 DSI----------------YKVFDLKNYT----MLYSISD--KNVQEIKISPGIMLLIFTKA-SG--HVPLKILSIED-- 266 (485)
Q Consensus 214 D~t----------------iKlWdl~~g~----~l~tl~~--~~V~~VafSpg~~ll~sss~-~~--D~tIklWdi~t-- 266 (485)
|+. |++|++.+++ +++.... ..+..++|||++..++..+. +. +..|.+||+.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQES 270 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSS
T ss_pred CCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccc
Confidence 877 9999999876 4455433 35889999986654444332 22 57899999987
Q ss_pred ----Ce-EEEEeecCCcceeEEEEEecCCCEEEEEeC----CCcEEEEECCCCe--eEEecccCCC--ceEEEEEcCCCc
Q 011452 267 ----GT-VLKSFNHLLHRNKKVDFIEQFNEKLLVKQE----NENLQILDVRNFE--LTEVSRTEFM--TPSAFIFLYENQ 333 (485)
Q Consensus 267 ----G~-~L~tl~~~~~~~~~V~f~~~~~~~lls~s~----D~tIkIWDv~tg~--~~~~l~gh~~--~v~avaFspdg~ 333 (485)
|+ .++.+..+...+..+ |+ +++++|+..+. +..|.+||+.+++ ..+.+..|.. .+..++|++++.
T Consensus 271 ~~~~~~~~~~~l~~~~~~~~~~-~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEGEYDY-VT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp SSSCSSCCCEEEECSSSSCEEE-EE-EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE
T ss_pred cccCCccceEEeeCCCCcEEEE-Ee-ccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE
Confidence 64 467777665555443 54 67888887653 3469999999875 2344444544 688899999999
Q ss_pred EEEEEe-CCc--EEEEeC-CCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe
Q 011452 334 LFLTFR-NRT--VAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK 409 (485)
Q Consensus 334 llaS~s-D~T--IklWd~-~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk 409 (485)
++++.+ |+. |.+||+ +|++++.+..|... |.+++++||++.|+-...+ ....++|.+||+.+|+
T Consensus 349 lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~-----v~~~~~s~d~~~l~~~~ss-------~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQLHDLATGALLKIFPLEVGS-----VVGYSGQKKDTEIFYQFTS-------FLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEECCCSSE-----EEEEECCTTCSEEEEEEEC-------SSCCCEEEEEETTSSS
T ss_pred EEEEEEECCEEEEEEEECCCCCEEEecCCCCce-----EEEEecCCCCCEEEEEEeC-------CCCCCEEEEEECCCCc
Confidence 999998 885 556788 59988999887544 8899999999866633221 2346899999999998
Q ss_pred E-EEEecCC
Q 011452 410 C-LAKIRAS 417 (485)
Q Consensus 410 ~-l~tl~gH 417 (485)
+ +..++.+
T Consensus 417 ~~~~~l~~~ 425 (710)
T 2xdw_A 417 LEPRVFREV 425 (710)
T ss_dssp CCCEEEEEC
T ss_pred cceEEeeec
Confidence 5 5556554
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.82 E-value=4.2e-18 Score=163.97 Aligned_cols=228 Identities=10% Similarity=0.070 Sum_probs=167.7
Q ss_pred cccCceEEEEeCCCCe-EEEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeE
Q 011452 191 SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTV 269 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~-~Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~ 269 (485)
...++..++|+ |+|+ +++++..++.|.+||..++...+..+...+..++|+|++.++++... +..|.+||.++|+.
T Consensus 26 ~~~~~eg~~~d-~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~--~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 26 GFTWTEGPVYV-PARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHG--LRRLERQREPGGEW 102 (296)
T ss_dssp CCSSEEEEEEE-GGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETT--TTEEEEECSTTCCE
T ss_pred CCccccCCeEe-CCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecC--CCeEEEEcCCCCcE
Confidence 34567789998 6887 88888899999999999882223334567999999998877776543 36899999999987
Q ss_pred EEEeecC----CcceeEEEEEecCCCEEEEEeC-----------------CCcEEEEECCCCeeEEecccCCCceEEEEE
Q 011452 270 LKSFNHL----LHRNKKVDFIEQFNEKLLVKQE-----------------NENLQILDVRNFELTEVSRTEFMTPSAFIF 328 (485)
Q Consensus 270 L~tl~~~----~~~~~~V~f~~~~~~~lls~s~-----------------D~tIkIWDv~tg~~~~~l~gh~~~v~avaF 328 (485)
...+... ......+++. ++|..+++.+. .+.|..+|.. ++. ..+..+...++.++|
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d-~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLA-PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAF 179 (296)
T ss_dssp EEEECEETTEECCCCCCEEEC-TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEE
T ss_pred EEEeeccCCCCCCCCCCEEEC-CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEE
Confidence 5543321 1234578885 55655554221 2344445554 554 344567778999999
Q ss_pred cCCCcEEEEEe-CCcEEEEeCC--CcE---EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEE
Q 011452 329 LYENQLFLTFR-NRTVAVWNFR--GEL---VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINI 402 (485)
Q Consensus 329 spdg~llaS~s-D~TIklWd~~--G~l---l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIkl 402 (485)
+|||++|++.+ +++|.+||++ |++ ...+..+... ..+|+++|||+++++. . +.|.+
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-----p~~i~~d~~G~l~v~~-~------------~~v~~ 241 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGK-----TDGLRVDAGGLIWASA-G------------DGVHV 241 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSC-----CCSEEEBTTSCEEEEE-T------------TEEEE
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCC-----CCeEEECCCCCEEEEc-C------------CeEEE
Confidence 99999997777 8999999984 776 4555333222 5689999999988876 2 78999
Q ss_pred EeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEE-cCCCCEEEEecCCCcEE
Q 011452 403 SNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFY-DEDRNEIYTGNRHGLVH 481 (485)
Q Consensus 403 Wdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~f-spDg~~LaSgs~DgtVk 481 (485)
||.. |+++.++..+. .+++++| +||++.|+.++.++.++
T Consensus 242 ~~~~-g~~~~~~~~~~---------------------------------------~~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 242 LTPD-GDELGRVLTPQ---------------------------------------TTSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp ECTT-SCEEEEEECSS---------------------------------------CCCEEEEESTTSCEEEEEETTEEEE
T ss_pred ECCC-CCEEEEEECCC---------------------------------------CceeEEEECCCCCEEEEEcCCeEEE
Confidence 9976 99999998765 3778999 69999999999988766
Q ss_pred E
Q 011452 482 V 482 (485)
Q Consensus 482 l 482 (485)
+
T Consensus 282 ~ 282 (296)
T 3e5z_A 282 I 282 (296)
T ss_dssp E
T ss_pred E
Confidence 5
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=2.2e-18 Score=167.63 Aligned_cols=271 Identities=11% Similarity=0.112 Sum_probs=183.2
Q ss_pred ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCc
Q 011452 137 EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI 216 (485)
Q Consensus 137 ~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~t 216 (485)
..|++|+|+|++..++..+. + ++++.| .++. ...+. ....++..++|+ ++|++++++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~----~------~~~~~~---~~~~---~~~~~-~~~~~~~~~~~~-~~g~l~~~~~~~~~ 67 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIIS----E------SELQTI---TAEP---WLEIS-KKGLQLEGLNFD-RQGQLFLLDVFEGN 67 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCC----G------GGSCEE---ECEE---EEEEE-SSCCCEEEEEEC-TTSCEEEEETTTCE
T ss_pred cccceeeecCCccceeEEee----c------ccCccc---ccce---eEEEe-ccCccccCcEEC-CCCCEEEEECCCCE
Confidence 35788999999988766432 2 233344 1221 01111 234567789998 79999888889999
Q ss_pred EEEeecCCCeEEEEE--cCCcEEEEEEcCCceEEEEEcCC--CCeeEEEEecCCCeEEEEee--cCCcceeEEEEEecCC
Q 011452 217 YKVFDLKNYTMLYSI--SDKNVQEIKISPGIMLLIFTKAS--GHVPLKILSIEDGTVLKSFN--HLLHRNKKVDFIEQFN 290 (485)
Q Consensus 217 iKlWdl~~g~~l~tl--~~~~V~~VafSpg~~ll~sss~~--~D~tIklWdi~tG~~L~tl~--~~~~~~~~V~f~~~~~ 290 (485)
|.+||+++++..... ....+.+++++|++.++++...+ ....|.+||.++++....+. .+...+..++|. +++
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d-~~g 146 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFD-SKG 146 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEEC-TTS
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEEC-CCC
Confidence 999999998865443 35689999999987777765432 01589999999887654443 223456788886 555
Q ss_pred CEEEEEeC------CCcEEEEECCCCeeEEecccCCCceEEEEEcCCCc-EEEEEe-CCcEEEEeC--CCcEEEEe----
Q 011452 291 EKLLVKQE------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNF--RGELVTSF---- 356 (485)
Q Consensus 291 ~~lls~s~------D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~-llaS~s-D~TIklWd~--~G~ll~tl---- 356 (485)
..+++... .+.|..+|..+++..... .+...+..++|+|||+ ++++.+ ++.|.+||+ +|+.+..+
T Consensus 147 ~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~ 225 (333)
T 2dg1_A 147 GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATI 225 (333)
T ss_dssp CEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEE
T ss_pred CEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceE
Confidence 54444433 245556666666654443 3445689999999998 556666 899999999 46544332
Q ss_pred ----ecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCC
Q 011452 357 ----EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDY 432 (485)
Q Consensus 357 ----~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~ 432 (485)
.++ . .+..++++|||+++++... ++.|.+||. +|+.+.++..+.. ..
T Consensus 226 ~~~~~~~-~-----~~~~i~~d~~G~l~v~~~~-----------~~~v~~~d~-~g~~~~~~~~~~~---------~~-- 276 (333)
T 2dg1_A 226 PYYFTGH-E-----GPDSCCIDSDDNLYVAMYG-----------QGRVLVFNK-RGYPIGQILIPGR---------DE-- 276 (333)
T ss_dssp EEECCSS-S-----EEEEEEEBTTCCEEEEEET-----------TTEEEEECT-TSCEEEEEECTTG---------GG--
T ss_pred EEecCCC-C-----CCCceEECCCCCEEEEEcC-----------CCEEEEECC-CCCEEEEEEcCCC---------cc--
Confidence 232 1 2688999999999988764 589999998 6888888865431 00
Q ss_pred CCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCC
Q 011452 433 SSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRH 477 (485)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~D 477 (485)
-.+..+.+++|+|||+.|+.++.+
T Consensus 277 ---------------------g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 277 ---------------------GHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ---------------------TCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ---------------------ccccCcceEEECCCCCEEEEEeCc
Confidence 000157889999999888766555
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=3.4e-18 Score=186.15 Aligned_cols=236 Identities=11% Similarity=0.054 Sum_probs=171.2
Q ss_pred ceEEEEeCCCCeEEEEeeCCC-----cEEEeecCCCeEEE-EEcCCcEEEEEEcCCceEEEEEcCCC-------------
Q 011452 195 PGFVEFDDVNGKVLTYSAQDS-----IYKVFDLKNYTMLY-SISDKNVQEIKISPGIMLLIFTKASG------------- 255 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~D~-----tiKlWdl~~g~~l~-tl~~~~V~~VafSpg~~ll~sss~~~------------- 255 (485)
+..++|| |||+.||+++.++ +|+|||+++|+.+. ++....+.+++|||++..+++++.+.
T Consensus 127 ~~~~~~S-PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 127 LRGYAFS-EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEEC-TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 4578998 8999999887544 99999999999765 34333467899998776555554432
Q ss_pred -CeeEEEEecCCCe----EEEEeecCCcceeEEEEEecCCCEEEEEeC-----CCcEEEEECCC------Ce-eEEeccc
Q 011452 256 -HVPLKILSIEDGT----VLKSFNHLLHRNKKVDFIEQFNEKLLVKQE-----NENLQILDVRN------FE-LTEVSRT 318 (485)
Q Consensus 256 -D~tIklWdi~tG~----~L~tl~~~~~~~~~V~f~~~~~~~lls~s~-----D~tIkIWDv~t------g~-~~~~l~g 318 (485)
...|++|++.+++ ++.....|......++|+ |++.+|+..+. +..|.+||+.+ ++ ..+.+..
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELS-DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEEC-TTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEc-CCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 1239999999987 333333344456788886 78888888653 67899999987 53 3555666
Q ss_pred CCCceEEEEEcCCCcEEEEEe--CC---cEEEEeCC-Cc--EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCC
Q 011452 319 EFMTPSAFIFLYENQLFLTFR--NR---TVAVWNFR-GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDD 390 (485)
Q Consensus 319 h~~~v~avaFspdg~llaS~s--D~---TIklWd~~-G~--ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d 390 (485)
|...+.. .|+|||+.|+..+ +. .|.+||+. ++ ..+++..|... ..+.+++|++++.+++++..
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~lv~~~~~----- 355 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK---DVLEWVACVRSNFLVLCYLH----- 355 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS---CEEEEEEEETTTEEEEEEEE-----
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC---CeEEEEEEEcCCEEEEEEEE-----
Confidence 7766665 4888888776555 32 69999996 53 34566666542 12788999999999999886
Q ss_pred CCCcCCCCe--EEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCC
Q 011452 391 PLAEGNAGS--INISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDR 468 (485)
Q Consensus 391 ~~~~~~Dgt--IklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg 468 (485)
|+. |.+||+.+|+++..|..|.. .|.+++++||+
T Consensus 356 ------~g~~~l~~~~~~~g~~~~~l~~~~~--------------------------------------~v~~~~~s~d~ 391 (710)
T 2xdw_A 356 ------DVKNTLQLHDLATGALLKIFPLEVG--------------------------------------SVVGYSGQKKD 391 (710)
T ss_dssp ------TTEEEEEEEETTTCCEEEEECCCSS--------------------------------------EEEEEECCTTC
T ss_pred ------CCEEEEEEEECCCCCEEEecCCCCc--------------------------------------eEEEEecCCCC
Confidence 564 66778778999999987742 78889999999
Q ss_pred CEEE----EecCCCcEEEccC
Q 011452 469 NEIY----TGNRHGLVHVWSN 485 (485)
Q Consensus 469 ~~La----Sgs~DgtVklWd~ 485 (485)
+.|+ |....++|.+||.
T Consensus 392 ~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 392 TEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp SEEEEEEECSSCCCEEEEEET
T ss_pred CEEEEEEeCCCCCCEEEEEEC
Confidence 8776 3335678888873
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.80 E-value=1.9e-17 Score=181.61 Aligned_cols=283 Identities=12% Similarity=0.070 Sum_probs=193.8
Q ss_pred cCEEEEEeCCCe---EEeeecc-----cCcEEEE-----eecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 105 RDIVFALAQSGV---CAAFCRE-----TNQRICF-----LNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 105 ~~~ias~s~dgt---iklW~~~-----tG~~l~t-----l~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
|++++-...++. -.||-+. .|+.-.- |...++..+.+++|||||+.||.++.+++.+ -.+++
T Consensus 118 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e-----~~~i~ 192 (741)
T 1yr2_A 118 GASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSD-----WRTVK 192 (741)
T ss_dssp TTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCS-----EEEEE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCc-----eEEEE
Confidence 788877776655 6777654 2332211 2222334789999999999999988664332 15799
Q ss_pred EeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCc--------------EEEeecCCCe----EEEEEcC
Q 011452 172 IEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI--------------YKVFDLKNYT----MLYSISD 233 (485)
Q Consensus 172 lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~t--------------iKlWdl~~g~----~l~tl~~ 233 (485)
+|++.+|+... . ..... ....++|+ || +.|++++.|.. |++|++.++. +++...+
T Consensus 193 v~dl~tg~~~~---~-~~~~~-~~~~~~ws-pD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 193 FVGVADGKPLA---D-ELKWV-KFSGLAWL-GN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp EEETTTCCEEE---E-EEEEE-ESCCCEES-TT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEECCCCCCCC---c-cCCCc-eeccEEEE-CC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 99998888621 1 11111 12368898 78 99999988765 8999998775 4555444
Q ss_pred C--cEEEEEEcCCce-EEEEEcCC--CCeeEEEEecCCC--eEEEEeecCCcceeEEEEEecCCCEEEEEeC----CCcE
Q 011452 234 K--NVQEIKISPGIM-LLIFTKAS--GHVPLKILSIEDG--TVLKSFNHLLHRNKKVDFIEQFNEKLLVKQE----NENL 302 (485)
Q Consensus 234 ~--~V~~VafSpg~~-ll~sss~~--~D~tIklWdi~tG--~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~----D~tI 302 (485)
+ .+..+.|||++. +++++... ....|.+||+.+| ++++.+..+........+ ++++.|+..+. +..|
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~--~dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD--GVGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE--EETTEEEEEECTTCTTCEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe--ccCCEEEEEECCCCCCCEE
Confidence 3 589999998775 44444322 2468999999988 425667655444444432 67888888764 4559
Q ss_pred EEEECCCC--eeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeC--CCcEEEEeecC-CCCCCCCCeeEEEECCC
Q 011452 303 QILDVRNF--ELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDH-LLWHPDCNTNNIYITSD 376 (485)
Q Consensus 303 kIWDv~tg--~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~--~G~ll~tl~gH-~~~~~~~~v~svafSpD 376 (485)
.+||+.++ +...++.++...+..++|+ +++++++.. |++.+||.+ +|+.++.+..+ ... |..++++||
T Consensus 344 ~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~-----v~~~~~s~d 417 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGS-----ASGLSGRPG 417 (741)
T ss_dssp EEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCE-----EEEEECCBT
T ss_pred EEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeE-----EEEeecCCC
Confidence 99999984 5666666666677788887 778888888 999888865 58888888753 333 889999999
Q ss_pred CCEEE-EEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 377 QDLII-SYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 377 G~~La-S~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
|+.|+ +++. ....++|.+||+.+|+ +..++.
T Consensus 418 ~~~l~~~~ss--------~~~P~~i~~~d~~tg~-~~~l~~ 449 (741)
T 1yr2_A 418 DRHAYLSFSS--------FTQPATVLALDPATAK-TTPWEP 449 (741)
T ss_dssp CSCEEEEEEE--------TTEEEEEEEEETTTTE-EEECSC
T ss_pred CCEEEEEEcC--------CCCCCEEEEEECCCCc-EEEEec
Confidence 98665 3332 1235899999999988 556654
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=1.8e-18 Score=188.14 Aligned_cols=275 Identities=11% Similarity=0.073 Sum_probs=183.9
Q ss_pred eeCCCEEEEEEeecCCCCcccceeEEEEeEec--cCCcCcccceeee-----ccccCceEEEEeCCCCeEEE-----Eee
Q 011452 145 NKNNDSLITVSVYASDNFSSLRCRSTRIEYIR--RGKPDAGFALFES-----ESLKWPGFVEFDDVNGKVLT-----YSA 212 (485)
Q Consensus 145 spdg~~Las~S~d~~~d~stL~~~t~~lw~i~--~G~~~~~~~lf~~-----~~~~~~~~V~Fs~pnG~~La-----s~s 212 (485)
+|+|+.|+.++.++... ...||-.. .|+. ..|+.. ++...+..++|| |||+.|| +|+
T Consensus 76 ~~dG~~~~~~~~~~~~~-------~~~l~~~~~~~~~~---~~l~d~~~~a~~~~~~~~~~~~S-PDG~~la~~~~~~G~ 144 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKE-------KAILYWRQGESGQE---KVLLDPNGWSKDGTVSLGTWAVS-WDGKKVAFAQKPNAA 144 (695)
T ss_dssp EEETTEEEEEEECTTCS-------SCEEEEEESTTSCC---EEEECGGGSSSSSCEEEEEEEEC-TTSSEEEEEEEETTC
T ss_pred EEECCEEEEEEEcCCCe-------EEEEEEEcCCCCCc---EEEEchHHhccCCCEEEEEEEEC-CCCCEEEEEECCCCC
Confidence 37888888776544322 23344432 3332 223321 111235578998 8999999 455
Q ss_pred CCCcEEEeecCCCeEE-E-EEcCCcEEEEEEcCCceEEEEEcCCC-----------CeeEEEEecCCCe----EEEEeec
Q 011452 213 QDSIYKVFDLKNYTML-Y-SISDKNVQEIKISPGIMLLIFTKASG-----------HVPLKILSIEDGT----VLKSFNH 275 (485)
Q Consensus 213 ~D~tiKlWdl~~g~~l-~-tl~~~~V~~VafSpg~~ll~sss~~~-----------D~tIklWdi~tG~----~L~tl~~ 275 (485)
.+.+|+|||+++|+.+ . .+......+++|||++..+++++.+. ...|++|++.+|+ ++.....
T Consensus 145 ~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~ 224 (695)
T 2bkl_A 145 DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG 224 (695)
T ss_dssp SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC
T ss_pred ceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC
Confidence 6789999999999864 2 12222226899999877666655432 1239999999887 4555555
Q ss_pred CCcceeEEEEEecCCCEEEEEeCCC----cEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe----CCcEEEEe
Q 011452 276 LLHRNKKVDFIEQFNEKLLVKQENE----NLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR----NRTVAVWN 347 (485)
Q Consensus 276 ~~~~~~~V~f~~~~~~~lls~s~D~----tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s----D~TIklWd 347 (485)
|...+..+.|+ |++.+|++.+.++ .|.+||..+++.... ..+...+...++ |+|++++++. ++.|.+||
T Consensus 225 ~~~~~~~~~~S-pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l-~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 225 DPTTFLQSDLS-RDGKYLFVYILRGWSENDVYWKRPGEKDFRLL-VKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp CTTCEEEEEEC-TTSCCEEEEEEETTTEEEEEEECTTCSSCEEE-EECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEB
T ss_pred CCEEEEEEEEC-CCCCEEEEEEeCCCCceEEEEEcCCCCceEEe-ecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEe
Confidence 55567789986 7888888876555 677777766765444 456666777777 5666666554 37899999
Q ss_pred CC-CcE--EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC-CCeEEEEecCCCCCCCC
Q 011452 348 FR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL-TGKCLAKIRASNGLPAE 423 (485)
Q Consensus 348 ~~-G~l--l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~-TGk~l~tl~gH~~~~~~ 423 (485)
++ ++. .+.+..|.. +..+.+++|+ ++++++++.. |++.+||.+. +|+++..+..+..
T Consensus 302 ~~~~~~~~~~~l~~~~~---~~~l~~~~~~-~~~lv~~~~~-----------dg~~~l~~~~~~g~~~~~l~~~~~---- 362 (695)
T 2bkl_A 302 PAKPARASWKEIVPEDS---SASLLSVSIV-GGHLSLEYLK-----------DATSEVRVATLKGKPVRTVQLPGV---- 362 (695)
T ss_dssp TTBCSGGGCEEEECCCS---SCEEEEEEEE-TTEEEEEEEE-----------TTEEEEEEEETTCCEEEECCCSSS----
T ss_pred CCCCCccCCeEEecCCC---CCeEEEEEEE-CCEEEEEEEE-----------CCEEEEEEEeCCCCeeEEecCCCC----
Confidence 96 653 234443321 1227889998 7889999887 7898888664 5888888876531
Q ss_pred cccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEE----EecCCCcEEEccC
Q 011452 424 NECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIY----TGNRHGLVHVWSN 485 (485)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~La----Sgs~DgtVklWd~ 485 (485)
..|.+++++||++.|+ |...+++|.+||.
T Consensus 363 ---------------------------------~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 363 ---------------------------------GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp ---------------------------------SEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred ---------------------------------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 2677789999999888 6667789999973
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=6.2e-17 Score=157.36 Aligned_cols=266 Identities=8% Similarity=0.007 Sum_probs=185.3
Q ss_pred eEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEe
Q 011452 98 IIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYI 175 (485)
Q Consensus 98 V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i 175 (485)
|.++.|+ ...+++.+.+++++.| .++.+..+.. +...+.+++|+|+|+.+++.+ .+ ..+.+|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~----~~------~~i~~~d~ 73 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISK-KGLQLEGLNFDRQGQLFLLDV----FE------GNIFKINP 73 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEES-SCCCEEEEEECTTSCEEEEET----TT------CEEEEECT
T ss_pred cceeeecCCccceeEEeecccCccc---ccceeEEEec-cCccccCcEECCCCCEEEEEC----CC------CEEEEEeC
Confidence 3334444 5667777889999999 3777777776 445689999999999766533 33 58889998
Q ss_pred ccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC----CcEEEeecCCCeEEEEEc----CCcEEEEEEcCCceE
Q 011452 176 RRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKNYTMLYSIS----DKNVQEIKISPGIML 247 (485)
Q Consensus 176 ~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D----~tiKlWdl~~g~~l~tl~----~~~V~~VafSpg~~l 247 (485)
..|++. .++. .....+..++|+ ++|+++++...+ +.|.+||.++++....+. ...+.+++++|++.+
T Consensus 74 ~~~~~~---~~~~-~~~~~~~~i~~~-~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l 148 (333)
T 2dg1_A 74 ETKEIK---RPFV-SHKANPAAIKIH-KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGF 148 (333)
T ss_dssp TTCCEE---EEEE-CSSSSEEEEEEC-TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCE
T ss_pred CCCcEE---EEee-CCCCCcceEEEC-CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCE
Confidence 777752 1221 223457789998 799998887766 789999998887653332 357999999998777
Q ss_pred EEEEcCC----CCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCC-CeeEE-------
Q 011452 248 LIFTKAS----GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN-FELTE------- 314 (485)
Q Consensus 248 l~sss~~----~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~t-g~~~~------- 314 (485)
+++.... ....|..+|.++++...... .......++|+ +++..|.++ +.++.|.+||+.+ ++.+.
T Consensus 149 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~-~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~ 226 (333)
T 2dg1_A 149 YFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NISVANGIALS-TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIP 226 (333)
T ss_dssp EEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEE
T ss_pred EEEeccccccCCCceEEEEeCCCCEEEEeec-CCCcccceEEC-CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEE
Confidence 7765421 12456666666666543332 23456788886 667767665 5789999999964 43322
Q ss_pred -ecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCC-CCCeeEEEECCCCCEEEEEec
Q 011452 315 -VSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHP-DCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 315 -~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~-~~~v~svafSpDG~~LaS~s~ 385 (485)
.+.++ ..+..++++++|+++++.. ++.|.+||.+|+.+.++..+....- ...+.+++|+|||+.|..++.
T Consensus 227 ~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 227 YYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred EecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 12233 4788999999999999888 8999999999998888865432000 001789999999877765543
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.79 E-value=4.5e-17 Score=159.54 Aligned_cols=215 Identities=9% Similarity=0.015 Sum_probs=171.4
Q ss_pred CCeEEEEeeCCCcEEEeecCCCeEEEEEcC---CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecC-Ccc
Q 011452 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISD---KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHL-LHR 279 (485)
Q Consensus 204 nG~~Las~s~D~tiKlWdl~~g~~l~tl~~---~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~-~~~ 279 (485)
.|++|++++.|+.|.+||.++|+.+.++.. ..+.+++++|++.++++ .+..|..||. +|+.+.++..+ ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs----~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS----YSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE----CBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe----CCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 378999999999999999999999998864 36899999998887774 2368999999 99999999854 245
Q ss_pred eeEEEEEecCCCEEEEEeC-CCcEEEEECCCCeeEEecc------cCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCCCc
Q 011452 280 NKKVDFIEQFNEKLLVKQE-NENLQILDVRNFELTEVSR------TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGE 351 (485)
Q Consensus 280 ~~~V~f~~~~~~~lls~s~-D~tIkIWDv~tg~~~~~l~------gh~~~v~avaFspdg~llaS~s-D~TIklWd~~G~ 351 (485)
+.++.+. +++..+++.+. ++.|..+|. +|+.+..+. ++...+..++++++|+++++.. ++.|..||.+|+
T Consensus 79 ~~~~~~~-~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~ 156 (276)
T 3no2_A 79 MQTARIL-PDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQ 156 (276)
T ss_dssp EEEEEEC-TTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred ccccEEC-CCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCC
Confidence 6778876 66777777666 788888886 577655542 3334567778999999999998 999999999999
Q ss_pred EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCC
Q 011452 352 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGD 431 (485)
Q Consensus 352 ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~ 431 (485)
++.++..+. + ..++.+.|+|++|++++. ++.|..+|..||+.+.++..+...
T Consensus 157 ~~w~~~~~~-~-----~~~~~~~~~g~~~v~~~~-----------~~~v~~~d~~tG~~~w~~~~~~~~----------- 208 (276)
T 3no2_A 157 LLNSVKLSG-T-----PFSSAFLDNGDCLVACGD-----------AHCFVQLNLESNRIVRRVNANDIE----------- 208 (276)
T ss_dssp EEEEEECSS-C-----CCEEEECTTSCEEEECBT-----------TSEEEEECTTTCCEEEEEEGGGSB-----------
T ss_pred EEEEEECCC-C-----ccceeEcCCCCEEEEeCC-----------CCeEEEEeCcCCcEEEEecCCCCC-----------
Confidence 999998753 2 567899999999998775 578999999999999999764310
Q ss_pred CCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEe
Q 011452 432 YSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTG 474 (485)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSg 474 (485)
...+..+.+++..|+|+++++.
T Consensus 209 ---------------------~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 209 ---------------------GVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp ---------------------SCCCSEEEEEEECTTSCEEEEE
T ss_pred ---------------------CccccccccceEcCCCCEEEEe
Confidence 0012367888888888888887
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=1e-16 Score=159.08 Aligned_cols=254 Identities=7% Similarity=0.018 Sum_probs=188.0
Q ss_pred eEEEEeEeccCCcCcccceeee---ccc-cCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEc
Q 011452 168 RSTRIEYIRRGKPDAGFALFES---ESL-KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKIS 242 (485)
Q Consensus 168 ~t~~lw~i~~G~~~~~~~lf~~---~~~-~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafS 242 (485)
.++.++|..+|+.... ++.. ..+ ..+..+.++ ++++.+....+++|.+||.++++.+.++. ......|+|+
T Consensus 17 ~~l~~~d~~t~~~~~~--i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~ 92 (328)
T 3dsm_A 17 ATLSYYDPATCEVENE--VFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFL 92 (328)
T ss_dssp BEEEEEETTTTEEECS--HHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEE
T ss_pred ceEEEEECCCCEEhhh--hHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEe
Confidence 5788888877876321 1211 011 224568886 57888888889999999999999999886 4679999999
Q ss_pred CCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCC-----cceeEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeEEe
Q 011452 243 PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL-----HRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNFELTEV 315 (485)
Q Consensus 243 pg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~-----~~~~~V~f~~~~~~~lls~s--~D~tIkIWDv~tg~~~~~ 315 (485)
|++++.++.. .+.+|.+||++++++++++.... .....+++ ++++|.++. .+++|.++|+.+++.+..
T Consensus 93 ~~g~lyv~~~--~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~---~~~~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 93 SDEKAYVTQI--WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ---YGKYVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp ETTEEEEEEB--SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE---ETTEEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred CCCeEEEEEC--CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE---ECCEEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 8778777753 34799999999999998887322 13456776 367887775 489999999999998887
Q ss_pred cccCCCceEEEEEcCCCcEEEEEe-C----------CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEE
Q 011452 316 SRTEFMTPSAFIFLYENQLFLTFR-N----------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (485)
Q Consensus 316 l~gh~~~v~avaFspdg~llaS~s-D----------~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~ 383 (485)
+... ..+..++|+|||++++++. + ++|.++|.+ ++++.++.-.... ..+.++|+|||++|..+
T Consensus 168 i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~----~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 168 LTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD----WPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp EECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC----CCEEEEECTTSCEEEEE
T ss_pred EEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC----CceeEEEecCCCEEEEE
Confidence 7543 3578899999999999887 6 799999996 8888777532111 16899999999999875
Q ss_pred ecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEE
Q 011452 384 CKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALF 463 (485)
Q Consensus 384 s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~ 463 (485)
. ++|.+||+.+++.+....... ......+++
T Consensus 243 ~-------------~~v~~~d~~t~~~~~~~~~~~------------------------------------~~~~p~gi~ 273 (328)
T 3dsm_A 243 N-------------NDIWRMPVEADRVPVRPFLEF------------------------------------RDTKYYGLT 273 (328)
T ss_dssp S-------------SSEEEEETTCSSCCSSCSBCC------------------------------------CSSCEEEEE
T ss_pred c-------------cEEEEEECCCCceeeeeeecC------------------------------------CCCceEEEE
Confidence 2 489999999887532100000 002678899
Q ss_pred EcC-CCCEEEEe----cCCCcEEEcc
Q 011452 464 YDE-DRNEIYTG----NRHGLVHVWS 484 (485)
Q Consensus 464 fsp-Dg~~LaSg----s~DgtVklWd 484 (485)
++| +|+..++. ..+++|.+||
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred EcCCCCeEEEEcccccccCCEEEEEC
Confidence 999 56666666 6789999997
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=8.6e-15 Score=138.11 Aligned_cols=269 Identities=10% Similarity=0.043 Sum_probs=190.8
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceEEEEeCCCCeEEEEeeC
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQ 213 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~ 213 (485)
+...+++|++.|+|..+++.. .. ..+..++.. |+.. .+.. .....+..++++ ++|.++++...
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~---~~-------~~v~~~d~~-~~~~----~~~~~~~~~~~~~i~~~-~~g~l~v~~~~ 76 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQH---KA-------NMISCINLD-GKIT----EYPLPTPDAKVMCLTIS-SDGEVWFTENA 76 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEET---TT-------TEEEEECTT-CCEE----EEECSSTTCCEEEEEEC-TTSCEEEEETT
T ss_pred cCCCccceEECCCCCEEEEec---CC-------CcEEEEcCC-CCeE----EecCCcccCceeeEEEC-CCCCEEEeCCC
Confidence 445799999999999776522 12 367778855 6541 2221 123457789997 79999888777
Q ss_pred CCcEEEeecCCCeE-EEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEE-eecCCcceeEEEEEecC
Q 011452 214 DSIYKVFDLKNYTM-LYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS-FNHLLHRNKKVDFIEQF 289 (485)
Q Consensus 214 D~tiKlWdl~~g~~-l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~t-l~~~~~~~~~V~f~~~~ 289 (485)
++.|..||.+ ++. .+.+. ...+..|++.|++.+.++... +..|.+||. +|+.... +..+......+++. ++
T Consensus 77 ~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~-~~ 151 (299)
T 2z2n_A 77 ANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN--GNRIGRITD-DGKIREYELPNKGSYPSFITLG-SD 151 (299)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT--TTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TT
T ss_pred CCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC--CceEEEECC-CCCEEEecCCCCCCCCceEEEc-CC
Confidence 8999999986 443 33433 457999999997777776543 368999998 7776543 23334556788875 45
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEe-cccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCCCcEEEE-eecCCCCCCCC
Q 011452 290 NEKLLVKQENENLQILDVRNFELTEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPDC 366 (485)
Q Consensus 290 ~~~lls~s~D~tIkIWDv~tg~~~~~-l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~G~ll~t-l~gH~~~~~~~ 366 (485)
+..+++...++.|..||. +++.... +..+...+..+++.++|+++++.. ++.|.+||.+|+.... +..+...
T Consensus 152 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~---- 226 (299)
T 2z2n_A 152 NALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNAR---- 226 (299)
T ss_dssp SCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCC----
T ss_pred CCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCCC----
Confidence 544444457899999999 7776654 444566799999999999999887 8999999997775432 2323222
Q ss_pred CeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEec--CCCCCCCCcccccCCCCCCCCcccccccc
Q 011452 367 NTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIR--ASNGLPAENECSCSGDYSSGSCNVKKHSH 444 (485)
Q Consensus 367 ~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~--gH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (485)
+.+|+++|+|++.++... ++.|..||. +|+.. .+. .+.
T Consensus 227 -~~~i~~~~~g~l~v~~~~-----------~~~i~~~d~-~g~~~-~~~~~~~~-------------------------- 266 (299)
T 2z2n_A 227 -PHAITAGAGIDLWFTEWG-----------ANKIGRLTS-NNIIE-EYPIQIKS-------------------------- 266 (299)
T ss_dssp -EEEEEECSTTCEEEEETT-----------TTEEEEEET-TTEEE-EEECSSSS--------------------------
T ss_pred -ceeEEECCCCCEEEeccC-----------CceEEEECC-CCceE-EEeCCCCC--------------------------
Confidence 889999999998887643 589999998 57543 332 221
Q ss_pred ccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEE
Q 011452 445 ASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHV 482 (485)
Q Consensus 445 ~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVkl 482 (485)
..+.++++ ++|+..++.+.++.+++
T Consensus 267 ------------~~~~~i~~-~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 267 ------------AEPHGICF-DGETIWFAMECDKIGKL 291 (299)
T ss_dssp ------------CCEEEEEE-CSSCEEEEETTTEEEEE
T ss_pred ------------CccceEEe-cCCCEEEEecCCcEEEE
Confidence 27889999 99999888776666665
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=3.3e-16 Score=155.42 Aligned_cols=268 Identities=10% Similarity=0.061 Sum_probs=189.4
Q ss_pred CCCeEEeeecccCcEEEEeec----C-CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCccccee
Q 011452 113 QSGVCAAFCRETNQRICFLNV----T-ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALF 187 (485)
Q Consensus 113 ~dgtiklW~~~tG~~l~tl~g----~-~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf 187 (485)
.++++.++|.+||+...++.. . .....+.+++. +++..++.. .. .++.++|..+|+... .+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~---~~-------~~v~viD~~t~~~~~---~i 80 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVN---NS-------HVIFAIDINTFKEVG---RI 80 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEG---GG-------TEEEEEETTTCCEEE---EE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEc---CC-------CEEEEEECcccEEEE---Ec
Confidence 489999999999998776521 1 11346788884 344444322 12 489999998888732 12
Q ss_pred eeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CC------cEEEEEEcCCceEEEEEcCCCCeeEE
Q 011452 188 ESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DK------NVQEIKISPGIMLLIFTKASGHVPLK 260 (485)
Q Consensus 188 ~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~------~V~~VafSpg~~ll~sss~~~D~tIk 260 (485)
. ....|..++|+ ++|++.++...+++|.+||+++++.+.++. +. ....|++ +++.+.++... .+.+|.
T Consensus 81 ~--~~~~p~~i~~~-~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~-~~~~v~ 155 (328)
T 3dsm_A 81 T--GFTSPRYIHFL-SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWS-YQNRIL 155 (328)
T ss_dssp E--CCSSEEEEEEE-ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECT-TCCEEE
T ss_pred C--CCCCCcEEEEe-CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCC-CCCEEE
Confidence 2 34678899997 688888877689999999999999887775 34 6677888 67777766431 247999
Q ss_pred EEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEe-CC----------CcEEEEECCCCeeEEecccC-CCceEEEEE
Q 011452 261 ILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-EN----------ENLQILDVRNFELTEVSRTE-FMTPSAFIF 328 (485)
Q Consensus 261 lWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s-~D----------~tIkIWDv~tg~~~~~l~gh-~~~v~avaF 328 (485)
++|++++++++++... .....+++. +++ ++.++. .+ ++|.++|.++++..+.+.-. ...++.++|
T Consensus 156 viD~~t~~~~~~i~~g-~~p~~i~~~-~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~ 232 (328)
T 3dsm_A 156 KIDTETDKVVDELTIG-IQPTSLVMD-KYN-KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL 232 (328)
T ss_dssp EEETTTTEEEEEEECS-SCBCCCEEC-TTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE
T ss_pred EEECCCCeEEEEEEcC-CCccceEEc-CCC-CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE
Confidence 9999999999988742 233567775 555 455543 33 79999999999988765422 247999999
Q ss_pred cCCCcEEEEEeCCcEEEEeCC-CcEEEE--eecCCCCCCCCCeeEEEECC-CCCEEEEEecCCCCCCCCcCCCCeEEEEe
Q 011452 329 LYENQLFLTFRNRTVAVWNFR-GELVTS--FEDHLLWHPDCNTNNIYITS-DQDLIISYCKADSDDPLAEGNAGSINISN 404 (485)
Q Consensus 329 spdg~llaS~sD~TIklWd~~-G~ll~t--l~gH~~~~~~~~v~svafSp-DG~~LaS~s~d~~~d~~~~~~DgtIklWd 404 (485)
+||+++|..+. ++|.+||.. +++... +..+.. ....|+++| +|.+.++...+ -..+++|.+||
T Consensus 233 ~~d~~~lyv~~-~~v~~~d~~t~~~~~~~~~~~~~~-----~p~gi~vdp~~g~lyva~~~~-------y~~~~~V~v~d 299 (328)
T 3dsm_A 233 NGTRDTLYWIN-NDIWRMPVEADRVPVRPFLEFRDT-----KYYGLTVNPNNGEVYVADAID-------YQQQGIVYRYS 299 (328)
T ss_dssp CTTSCEEEEES-SSEEEEETTCSSCCSSCSBCCCSS-----CEEEEEECTTTCCEEEEECTT-------SSSEEEEEEEC
T ss_pred ecCCCEEEEEc-cEEEEEECCCCceeeeeeecCCCC-----ceEEEEEcCCCCeEEEEcccc-------cccCCEEEEEC
Confidence 99988776543 499999996 775321 221111 268999999 67777775110 01268999999
Q ss_pred CCCCeEEEEecC
Q 011452 405 ILTGKCLAKIRA 416 (485)
Q Consensus 405 l~TGk~l~tl~g 416 (485)
.. |+.++++.-
T Consensus 300 ~~-g~~~~~i~~ 310 (328)
T 3dsm_A 300 PQ-GKLIDEFYV 310 (328)
T ss_dssp TT-CCEEEEEEE
T ss_pred CC-CCEEEEEEe
Confidence 88 999999864
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.76 E-value=4.8e-15 Score=160.45 Aligned_cols=320 Identities=12% Similarity=0.053 Sum_probs=217.7
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEec--cCCcCc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIR--RGKPDA 182 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~--~G~~~~ 182 (485)
+.++++...++++.++|..|++.+.++..+. .+..+.|||||++|.+++. + ..+.++|+. +++..
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~--~p~~v~~SpDGr~lyv~~~----d------g~V~viD~~~~t~~~v- 233 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGR----D------GKVNMIDLWMKEPTTV- 233 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSS--CEEEEEECTTSCEEEEEET----T------SEEEEEETTSSSCCEE-
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCC--CccceEECCCCCEEEEEcC----C------CeEEEEECCCCCCcEe-
Confidence 5677888899999999999999999887633 4779999999999987662 3 378899985 66542
Q ss_pred ccceeeeccccCceEEEEeC---CCCeEEEEee-CCCcEEEeecCCCeEEEEEcC------------C-cEEEEEEcCC-
Q 011452 183 GFALFESESLKWPGFVEFDD---VNGKVLTYSA-QDSIYKVFDLKNYTMLYSISD------------K-NVQEIKISPG- 244 (485)
Q Consensus 183 ~~~lf~~~~~~~~~~V~Fs~---pnG~~Las~s-~D~tiKlWdl~~g~~l~tl~~------------~-~V~~VafSpg- 244 (485)
.+...-..+..++|++ |||++|..+. .+++|.|+|..+.+.+.++.. . .|..|.+|++
T Consensus 234 ----~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 234 ----AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp ----EEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred ----EEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 1211123467899985 6998776655 569999999999999888751 1 5889999975
Q ss_pred ceEEEEEcCCCCeeEEEEecCCCeEEEEee-cCCcceeEEEEEecCCCEEEEEe-CCCcEEEEECCCCeeEEeccc----
Q 011452 245 IMLLIFTKASGHVPLKILSIEDGTVLKSFN-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNFELTEVSRT---- 318 (485)
Q Consensus 245 ~~ll~sss~~~D~tIklWdi~tG~~L~tl~-~~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~tg~~~~~l~g---- 318 (485)
..++... ...+.|.++|..+.+.++.-. ........+.|. +++.+++++. .+++|.++|+.+++++..+.-
T Consensus 310 ~~~vv~~--~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~-pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~ 386 (567)
T 1qks_A 310 PEFIVNV--KETGKILLVDYTDLNNLKTTEISAERFLHDGGLD-GSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT 386 (567)
T ss_dssp SEEEEEE--TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEEC-TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS
T ss_pred CEEEEEe--cCCCeEEEEecCCCccceeeeeeccccccCceEC-CCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC
Confidence 4444443 334799999988765444322 112334467775 7888888864 789999999999998766533
Q ss_pred -CCCceEEEEEcCC-CcEEEEEe--CCcEEEEeCC--------CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecC
Q 011452 319 -EFMTPSAFIFLYE-NQLFLTFR--NRTVAVWNFR--------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 386 (485)
Q Consensus 319 -h~~~v~avaFspd-g~llaS~s--D~TIklWd~~--------G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d 386 (485)
|...--.+ |.|+ |.+++++. +++|.++|.+ .+.++++...... -.-|.++||+++|-....-
T Consensus 387 Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g-----~~~i~~~p~~~~l~v~~~~ 460 (567)
T 1qks_A 387 PHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG-----SLFIKTHPNSQYLYVDATL 460 (567)
T ss_dssp BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-----CCCEECCTTCSEEEEECTT
T ss_pred CCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCC-----CEEEEeCCCCCeEEEecCC
Confidence 33222223 6887 66777775 7999999985 4688888865321 1347889999988875420
Q ss_pred CCCCCCCcCCCCeEEEEeCCCC------eEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeE
Q 011452 387 DSDDPLAEGNAGSINISNILTG------KCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDIT 460 (485)
Q Consensus 387 ~~~d~~~~~~DgtIklWdl~TG------k~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~ 460 (485)
.++ ....++|-++|+.+. +++..+.--+ .+.+++.-..+.
T Consensus 461 ~~~----~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~------------------------------~~~~~~~~~~~~ 506 (567)
T 1qks_A 461 NPE----AEISGSVAVFDIKAMTGDGSDPEFKTLPIAE------------------------------WAGITEGQPRVV 506 (567)
T ss_dssp CSS----HHHHTCEEEEEGGGCCCSSSCCCEEEECHHH------------------------------HHTCCSSCCEEE
T ss_pred CCC----cccCceEEEEECCcccccccCCCcEEecccc------------------------------ccccCCCCcceE
Confidence 000 000369999999876 1223332000 000000012788
Q ss_pred EEEEcCCCCEEEEecC-----CCcEEEcc
Q 011452 461 ALFYDEDRNEIYTGNR-----HGLVHVWS 484 (485)
Q Consensus 461 sl~fspDg~~LaSgs~-----DgtVklWd 484 (485)
.+.|+|||++|+.+.+ ++.|-|.|
T Consensus 507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp EEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred eeeECCCCCEEEEEeecCCCCCCcEEEEE
Confidence 8999999999887743 68887765
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.76 E-value=8.2e-17 Score=176.60 Aligned_cols=274 Identities=10% Similarity=0.057 Sum_probs=181.0
Q ss_pred eeCCCEEEEEEeecCCCCcccceeEEEEeEec-----cCCcCcccceeee-----ccccCceEEEEeCCCCeEEEEeeCC
Q 011452 145 NKNNDSLITVSVYASDNFSSLRCRSTRIEYIR-----RGKPDAGFALFES-----ESLKWPGFVEFDDVNGKVLTYSAQD 214 (485)
Q Consensus 145 spdg~~Las~S~d~~~d~stL~~~t~~lw~i~-----~G~~~~~~~lf~~-----~~~~~~~~V~Fs~pnG~~Las~s~D 214 (485)
+|||+.++..+.++..+ ...||-.. .|+. ..|+.. ++...+..++|| |||+.||+++.+
T Consensus 115 ~pdG~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~---~~lld~~~l~~~~~~~~~~~~~S-PDG~~la~~~~~ 183 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMN-------QSQLLVRPADAPVGTKG---RVLLDPNTWAKDGATALDAWAAS-DDGRLLAYSVQD 183 (741)
T ss_dssp EEETTEEEEEEECSSCS-------SCEEEEEETTSCTTCCC---EEEECGGGCC----EEEEEEEEC-TTSSEEEEEEEE
T ss_pred EEECCEEEEEEEcCCCe-------EEEEEEEcCCccCCCCC---EEEECHHHhccCCCEEEEeEEEC-CCCCEEEEEEcC
Confidence 49999999877655433 23455542 2332 223221 111234578998 899999998754
Q ss_pred -----CcEEEeecCCCeEEEE-EcCCcEEEEEEcCCceEEEEEcCCC------------CeeEEEEecCCCe----EEEE
Q 011452 215 -----SIYKVFDLKNYTMLYS-ISDKNVQEIKISPGIMLLIFTKASG------------HVPLKILSIEDGT----VLKS 272 (485)
Q Consensus 215 -----~tiKlWdl~~g~~l~t-l~~~~V~~VafSpg~~ll~sss~~~------------D~tIklWdi~tG~----~L~t 272 (485)
.+|+|||+++|+.+.. +....+.+++|||+ ..+.+++.+. ...|++|++.+++ ++..
T Consensus 184 ~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~ 262 (741)
T 1yr2_A 184 GGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA 262 (741)
T ss_dssp TTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC
T ss_pred CCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec
Confidence 5799999999987543 22222357999998 5444544332 2349999998886 3333
Q ss_pred eecCCcceeEEEEEecCCCEEEEEeCC-----CcEEEEECCCC--eeEEecccCCCceEEEEEcCCCcEEEEEe-CC---
Q 011452 273 FNHLLHRNKKVDFIEQFNEKLLVKQEN-----ENLQILDVRNF--ELTEVSRTEFMTPSAFIFLYENQLFLTFR-NR--- 341 (485)
Q Consensus 273 l~~~~~~~~~V~f~~~~~~~lls~s~D-----~tIkIWDv~tg--~~~~~l~gh~~~v~avaFspdg~llaS~s-D~--- 341 (485)
...+...+..+.|+ ||+.+|+..+.+ ..|.+||+.++ ++.+.+..+...+...+ +|+|+.|+..+ ++
T Consensus 263 ~~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 263 TPELPKRGHGASVS-SDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPL 340 (741)
T ss_dssp CTTCTTCEEEEEEC-TTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTT
T ss_pred cCCCCeEEEEEEEC-CCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCC
Confidence 33332346788886 788888887643 48999999988 52455555665666664 48888877766 33
Q ss_pred -cEEEEeCC-C-cEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC-CCeEEEEecCC
Q 011452 342 -TVAVWNFR-G-ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL-TGKCLAKIRAS 417 (485)
Q Consensus 342 -TIklWd~~-G-~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~-TGk~l~tl~gH 417 (485)
.|.+||++ + ...+.+..|... .+.+++++ ++.+++++.. |+..+||.+. +|+++..+..+
T Consensus 341 ~~l~~~d~~~~~~~~~~l~~~~~~----~l~~~~~~-~~~lv~~~~~-----------dg~~~l~~~~~~g~~~~~l~~~ 404 (741)
T 1yr2_A 341 KKIVRVDLSGSTPRFDTVVPESKD----NLESVGIA-GNRLFASYIH-----------DAKSQVLAFDLDGKPAGAVSLP 404 (741)
T ss_dssp CEEEEEECSSSSCEEEEEECCCSS----EEEEEEEE-BTEEEEEEEE-----------TTEEEEEEEETTSCEEEECBCS
T ss_pred CEEEEEeCCCCccccEEEecCCCC----eEEEEEEE-CCEEEEEEEE-----------CCEEEEEEEeCCCCceeeccCC
Confidence 49999996 3 344444433322 26788887 6778888886 6888888654 58888888654
Q ss_pred CCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEE----EecCCCcEEEccC
Q 011452 418 NGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIY----TGNRHGLVHVWSN 485 (485)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~La----Sgs~DgtVklWd~ 485 (485)
.. ..|..++++||++.|+ |....++|.+||.
T Consensus 405 ~~-------------------------------------~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 405 GI-------------------------------------GSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp SS-------------------------------------CEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred CC-------------------------------------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 21 2688899999999877 5566789999873
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=2.5e-16 Score=147.92 Aligned_cols=231 Identities=10% Similarity=-0.021 Sum_probs=164.4
Q ss_pred CceEEEEeCCCCeEEE-EeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEE
Q 011452 194 WPGFVEFDDVNGKVLT-YSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVL 270 (485)
Q Consensus 194 ~~~~V~Fs~pnG~~La-s~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L 270 (485)
.|..++|+ ++|++++ +.+.++.|.+||..++....... ...+..|+++|++.+.++.. ++.|.+||..++. +
T Consensus 25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~---~~~i~~~d~~~~~-~ 99 (270)
T 1rwi_B 25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF---NNRVVTLAAGSNN-Q 99 (270)
T ss_dssp CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET---TTEEEEECTTCSC-C
T ss_pred CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC---CCEEEEEeCCCce-E
Confidence 67799998 7999888 66788999999976655322111 24688999998777777644 3689999986654 3
Q ss_pred EEee-cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeC
Q 011452 271 KSFN-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF 348 (485)
Q Consensus 271 ~tl~-~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~ 348 (485)
..+. ........+++. +++..+++...++.|.+||..+.........+...+..+++.|+|+++++.. ++.|.+||.
T Consensus 100 ~~~~~~~~~~p~~i~~~-~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVD-TQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp EECCCCSCSSEEEEEEC-TTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred eeeecCCcCCCcceEEC-CCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 4443 223456788885 4555444446789999998776655444444556789999999999999988 899999999
Q ss_pred CCcEE-EEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccc
Q 011452 349 RGELV-TSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECS 427 (485)
Q Consensus 349 ~G~ll-~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~ 427 (485)
++... .....+... ..+|+++|+|.+.++... ++.|.+||..+.........+
T Consensus 179 ~~~~~~~~~~~~~~~-----p~~i~~d~~g~l~v~~~~-----------~~~v~~~~~~~~~~~~~~~~~---------- 232 (270)
T 1rwi_B 179 ESNNQVVLPFTDITA-----PWGIAVDEAGTVYVTEHN-----------TNQVVKLLAGSTTSTVLPFTG---------- 232 (270)
T ss_dssp TTCCEEECCCSSCCS-----EEEEEECTTCCEEEEETT-----------TSCEEEECTTCSCCEECCCCS----------
T ss_pred CCCceEeecccCCCC-----ceEEEECCCCCEEEEECC-----------CCcEEEEcCCCCcceeeccCC----------
Confidence 85433 332333222 789999999988888654 589999998654432211111
Q ss_pred cCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 428 CSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
+..+.+++++|||+.+++.+.+++|++++
T Consensus 233 ----------------------------~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 233 ----------------------------LNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp ----------------------------CSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred ----------------------------CCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 12688999999999999999999999986
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=5.6e-16 Score=149.09 Aligned_cols=234 Identities=9% Similarity=-0.060 Sum_probs=167.5
Q ss_pred CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC
Q 011452 125 NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN 204 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn 204 (485)
+..+..+.. +.....+++|+|+|+.|+.++. .+ ..+..|+...+ . ..|.. ....+..++|+ ++
T Consensus 17 ~~~~~~l~~-~~~~~eg~~~d~~g~~l~~~~~---~~------~~i~~~~~~~~-~----~~~~~-~~~~~~~l~~~-~d 79 (296)
T 3e5z_A 17 GAEARRLAD-GFTWTEGPVYVPARSAVIFSDV---RQ------NRTWAWSDDGQ-L----SPEMH-PSHHQNGHCLN-KQ 79 (296)
T ss_dssp TCCCEEEEC-CCSSEEEEEEEGGGTEEEEEEG---GG------TEEEEEETTSC-E----EEEES-SCSSEEEEEEC-TT
T ss_pred CCcEEEEec-CCccccCCeEeCCCCEEEEEeC---CC------CEEEEEECCCC-e----EEEEC-CCCCcceeeEC-CC
Confidence 444444544 4456889999999994443331 22 47888886554 3 23443 34567789998 79
Q ss_pred CeEEEEeeCCCcEEEeecCCCeEEEEEc------CCcEEEEEEcCCceEEEEEcCC---------------CCeeEEEEe
Q 011452 205 GKVLTYSAQDSIYKVFDLKNYTMLYSIS------DKNVQEIKISPGIMLLIFTKAS---------------GHVPLKILS 263 (485)
Q Consensus 205 G~~Las~s~D~tiKlWdl~~g~~l~tl~------~~~V~~VafSpg~~ll~sss~~---------------~D~tIklWd 263 (485)
|+++++...++.|.+||.++|+...... ...+.+|+++|++.++++.+.. ....|..++
T Consensus 80 g~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 80 GHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp CCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred CcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 9999988888999999998888644332 1356789999988877763210 112444445
Q ss_pred cCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECC-CCee---EEecccCCCceEEEEEcCCCcEEEEEe
Q 011452 264 IEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR-NFEL---TEVSRTEFMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 264 i~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~-tg~~---~~~l~gh~~~v~avaFspdg~llaS~s 339 (485)
.. |+. ..+..+......++|+ |++..|++.+.++.|.+||+. +|++ .+++..+...+..++|.++|+++++.
T Consensus 160 ~~-g~~-~~~~~~~~~~~gi~~s-~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 160 PD-GTL-SAPIRDRVKPNGLAFL-PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp TT-SCE-EEEECCCSSEEEEEEC-TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred CC-CCE-EEeecCCCCCccEEEC-CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 43 554 4455555667789996 777777555788999999997 6665 34444466678899999999999888
Q ss_pred CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEE-CCCCCEEEEEec
Q 011452 340 NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYI-TSDQDLIISYCK 385 (485)
Q Consensus 340 D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svaf-SpDG~~LaS~s~ 385 (485)
++.|.+||.+|+++..+..+.. +.+++| +|||+.|..++.
T Consensus 236 ~~~v~~~~~~g~~~~~~~~~~~------~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 236 GDGVHVLTPDGDELGRVLTPQT------TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp TTEEEEECTTSCEEEEEECSSC------CCEEEEESTTSCEEEEEET
T ss_pred CCeEEEECCCCCEEEEEECCCC------ceeEEEECCCCCEEEEEcC
Confidence 8999999999999999987652 578999 699998888875
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=4e-14 Score=133.54 Aligned_cols=274 Identities=9% Similarity=0.020 Sum_probs=191.0
Q ss_pred ccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEE
Q 011452 95 RSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (485)
Q Consensus 95 ~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~l 172 (485)
.+.+..|++. |.+.++...++.+..|+.. |+........+...+.+|+++|+|..+++.. .+ ..+..
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~------~~i~~ 82 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTEN----AA------NKIGR 82 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEET----TT------TEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCC----CC------CeEEE
Confidence 3567888888 7777776668999999988 7755433222456799999999999777632 12 35666
Q ss_pred eEeccCCcCcccceeee-ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEE-EEEc--CCcEEEEEEcCCceEE
Q 011452 173 EYIRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--DKNVQEIKISPGIMLL 248 (485)
Q Consensus 173 w~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l-~tl~--~~~V~~VafSpg~~ll 248 (485)
++. .|+. ..+.. .....+..++++ ++|.++++...++.|.+||. +++.. +.+. ...+..++++|++.+.
T Consensus 83 ~~~-~g~~----~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 155 (299)
T 2z2n_A 83 ITK-KGII----KEYTLPNPDSAPYGITEG-PNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALW 155 (299)
T ss_dssp ECT-TSCE----EEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred ECC-CCcE----EEEeCCCcCCCceeeEEC-CCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEE
Confidence 664 3543 12221 123467789997 79999988877899999998 66644 3333 3579999999877777
Q ss_pred EEEcCCCCeeEEEEecCCCeEEEE-eecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEe-cccCCCceEEE
Q 011452 249 IFTKASGHVPLKILSIEDGTVLKS-FNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEV-SRTEFMTPSAF 326 (485)
Q Consensus 249 ~sss~~~D~tIklWdi~tG~~L~t-l~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~-l~gh~~~v~av 326 (485)
++... ...|..||. +|+.... +.........+++. +++..+++...++.|.+||. +++.... +..+...+.++
T Consensus 156 v~~~~--~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i 230 (299)
T 2z2n_A 156 FTENQ--NNAIGRITE-SGDITEFKIPTPASGPVGITKG-NDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAI 230 (299)
T ss_dssp EEETT--TTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred EEeCC--CCEEEEEcC-CCcEEEeeCCCCCCcceeEEEC-CCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeE
Confidence 76443 368999999 8887653 33334556688875 45554444457899999999 7775543 44466789999
Q ss_pred EEcCCCcEEEEEe-CCcEEEEeCCCcEEEE-eecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEe
Q 011452 327 IFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISN 404 (485)
Q Consensus 327 aFspdg~llaS~s-D~TIklWd~~G~ll~t-l~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWd 404 (485)
++.++|+++++.. ++.|..||.+|+.... +.++... +.++++ ++|++.++.+. +.|..+|
T Consensus 231 ~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~-----~~~i~~-~~g~l~v~~~~------------~~l~~~~ 292 (299)
T 2z2n_A 231 TAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAE-----PHGICF-DGETIWFAMEC------------DKIGKLT 292 (299)
T ss_dssp EECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCC-----EEEEEE-CSSCEEEEETT------------TEEEEEE
T ss_pred EECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCc-----cceEEe-cCCCEEEEecC------------CcEEEEE
Confidence 9999999999886 8999999998764322 3344333 889999 99999998642 5566667
Q ss_pred CCCCe
Q 011452 405 ILTGK 409 (485)
Q Consensus 405 l~TGk 409 (485)
..+++
T Consensus 293 ~~~~~ 297 (299)
T 2z2n_A 293 LIKDN 297 (299)
T ss_dssp EC---
T ss_pred cCccc
Confidence 66553
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=2.1e-15 Score=155.70 Aligned_cols=255 Identities=13% Similarity=0.150 Sum_probs=180.6
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC-CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeE
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTV 269 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~-~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~ 269 (485)
.+..|..|+|+ ++|+++++...++.|++||++++++...+.. .... ++|+|++..+..+..+....|.+++..++..
T Consensus 129 ~~~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 129 KFKYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCCCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred ccCCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 46788899998 7999999988889999999998887655543 3334 9999865544443333323899999888776
Q ss_pred EEEe----ecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEe----cccCCCc-eE-EEEEcC-CCcEEEEE
Q 011452 270 LKSF----NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEV----SRTEFMT-PS-AFIFLY-ENQLFLTF 338 (485)
Q Consensus 270 L~tl----~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~----l~gh~~~-v~-avaFsp-dg~llaS~ 338 (485)
+..+ .........+++. |+++.|.++..+++|..||..+++.... ..++... +. .++|+| ++.++++.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~-p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALD-ETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEEC-TTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEe-CCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 6666 3234566788885 5567788776789999999998875444 3333322 34 999999 68888888
Q ss_pred e-CCcEEEEeCCCcEEEEeecCC---CCCC-------CCCeeEEEECCCCCEEEEEe-cCCCCCCCCcCCCCeEEEEeCC
Q 011452 339 R-NRTVAVWNFRGELVTSFEDHL---LWHP-------DCNTNNIYITSDQDLIISYC-KADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 339 s-D~TIklWd~~G~ll~tl~gH~---~~~~-------~~~v~svafSpDG~~LaS~s-~d~~~d~~~~~~DgtIklWdl~ 406 (485)
+ +++|..|+.+|+ +.++.++. .+.. ...-+.|+|+|||+++++-+ . ++.|+.||+.
T Consensus 286 ~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----------~~~I~~~~~~ 353 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----------GYCLRKLDIL 353 (409)
T ss_dssp TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----------TCEEEEEETT
T ss_pred CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----------CCEEEEEECC
Confidence 8 999999999987 55666654 0000 01267999999999888855 4 6899999988
Q ss_pred CCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 407 TGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 407 TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
+|+ +.++.++.... ...++ ......+...++|+++|||+.+++-..++.|+..+
T Consensus 354 ~G~-v~~~~g~~~~~-----g~~~g------------------~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 354 DGY-VSTVAGQVDVA-----SQIDG------------------TPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp TTE-EEEEEECTTCB-----SCCCB------------------STTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred CCE-EEEEeCCCCCC-----CcCCC------------------ChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 887 56676763100 00000 00011134788999999999999999999998754
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.72 E-value=3.7e-15 Score=142.62 Aligned_cols=232 Identities=12% Similarity=0.113 Sum_probs=168.0
Q ss_pred cccCceEEEEeCCCCeEEEE-------eeCCCcEEEeecCCCeEEEE-E-----cCCcEEEEEEcCC-ceEEEEEcCCCC
Q 011452 191 SLKWPGFVEFDDVNGKVLTY-------SAQDSIYKVFDLKNYTMLYS-I-----SDKNVQEIKISPG-IMLLIFTKASGH 256 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las-------~s~D~tiKlWdl~~g~~l~t-l-----~~~~V~~VafSpg-~~ll~sss~~~D 256 (485)
.+..+..++|+ ++|.++++ +..++.|.+||+.+++.... . ....+..++++|+ +.+.++...
T Consensus 16 ~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~--- 91 (314)
T 1pjx_A 16 DIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR--- 91 (314)
T ss_dssp CCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT---
T ss_pred cCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC---
Confidence 35678899998 79999888 67789999999988886432 2 2357999999987 887776542
Q ss_pred eeEEEEecCCCeEEEE-eec----CCcceeEEEEEecCCCEEEEEeCC---------------CcEEEEECCCCeeEEec
Q 011452 257 VPLKILSIEDGTVLKS-FNH----LLHRNKKVDFIEQFNEKLLVKQEN---------------ENLQILDVRNFELTEVS 316 (485)
Q Consensus 257 ~tIklWdi~tG~~L~t-l~~----~~~~~~~V~f~~~~~~~lls~s~D---------------~tIkIWDv~tg~~~~~l 316 (485)
..|.+||.+ |+.... ... ....+..+++. +++..+++...+ +.|..||.. ++.....
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD-YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEEC-TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEEC-CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 379999998 886543 221 11345688885 555444444444 567777776 6654443
Q ss_pred ccCCCceEEEEEc----CCCc-EEEEEe-CCcEEEEeCC--Cc-----EEEEeecCC-CCCCCCCeeEEEECCCCCEEEE
Q 011452 317 RTEFMTPSAFIFL----YENQ-LFLTFR-NRTVAVWNFR--GE-----LVTSFEDHL-LWHPDCNTNNIYITSDQDLIIS 382 (485)
Q Consensus 317 ~gh~~~v~avaFs----pdg~-llaS~s-D~TIklWd~~--G~-----ll~tl~gH~-~~~~~~~v~svafSpDG~~LaS 382 (485)
.+...+..++|+ |||+ ++++.. ++.|.+||.+ |+ .+..+.++. .. ...++++|||++.++
T Consensus 169 -~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~-----p~~i~~d~~G~l~v~ 242 (314)
T 1pjx_A 169 -TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG-----ADGMDFDEDNNLLVA 242 (314)
T ss_dssp -EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE-----EEEEEEBTTCCEEEE
T ss_pred -cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC-----CCceEECCCCCEEEE
Confidence 345568899999 9996 456656 8999999974 54 334455443 23 688999999999998
Q ss_pred EecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEE
Q 011452 383 YCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITAL 462 (485)
Q Consensus 383 ~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl 462 (485)
... ++.|.+||..+|+.+..+..+. ..+.++
T Consensus 243 ~~~-----------~~~i~~~d~~~g~~~~~~~~~~--------------------------------------~~~~~i 273 (314)
T 1pjx_A 243 NWG-----------SSHIEVFGPDGGQPKMRIRCPF--------------------------------------EKPSNL 273 (314)
T ss_dssp EET-----------TTEEEEECTTCBSCSEEEECSS--------------------------------------SCEEEE
T ss_pred EcC-----------CCEEEEEcCCCCcEeEEEeCCC--------------------------------------CCceeE
Confidence 764 5899999998899888876653 278999
Q ss_pred EEcCCCCEE-EEecCCCcEEEcc
Q 011452 463 FYDEDRNEI-YTGNRHGLVHVWS 484 (485)
Q Consensus 463 ~fspDg~~L-aSgs~DgtVklWd 484 (485)
+|+|||+.| ++.+.++.|..|+
T Consensus 274 ~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 274 HFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp EECTTSSEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEe
Confidence 999999955 4555677887775
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=5.7e-15 Score=138.65 Aligned_cols=237 Identities=9% Similarity=0.009 Sum_probs=165.3
Q ss_pred cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcE
Q 011452 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIY 217 (485)
Q Consensus 138 ~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~ti 217 (485)
...+|+++|+|+.++++. . .+ ..+..++...+.. ..+.......|..++|+ ++|+++++.. ++.|
T Consensus 25 ~p~~i~~~~~g~l~v~~~--~-~~------~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~-~~g~l~v~~~-~~~i 89 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSE--G-MY------GRVVKLATGSTGT----TVLPFNGLYQPQGLAVD-GAGTVYVTDF-NNRV 89 (270)
T ss_dssp CEEEEEECTTCCEEEEEC--S-SS------CEEEEECC---------EECCCCSCCSCCCEEEC-TTCCEEEEET-TTEE
T ss_pred CccceEECCCCCEEEEcc--C-CC------CcEEEecCCCccc----ceEeeCCcCCcceeEEC-CCCCEEEEcC-CCEE
Confidence 578999999999666221 1 22 4677777533332 11222234567789997 7899888777 8899
Q ss_pred EEeecCCCeEEEEE--cC-CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEE
Q 011452 218 KVFDLKNYTMLYSI--SD-KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLL 294 (485)
Q Consensus 218 KlWdl~~g~~l~tl--~~-~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~ll 294 (485)
.+||..+.... .+ .+ ..+..|+++|++.+.++... ++.|.+|+..++...............+++. +++..++
T Consensus 90 ~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~-~~g~l~v 165 (270)
T 1rwi_B 90 VTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRG--NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD-NSGNVYV 165 (270)
T ss_dssp EEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGG--GTEEEEECTTCCSCEECCCCSCCSCCCEEEC-TTCCEEE
T ss_pred EEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECC--CCEEEEEECCCceeEeeccccCCCceeEEEe-CCCCEEE
Confidence 99998765432 23 22 57999999987777776443 3689999876655443332333456688885 5555444
Q ss_pred EEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCCCcEEEEee-cCCCCCCCCCeeEEE
Q 011452 295 VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFE-DHLLWHPDCNTNNIY 372 (485)
Q Consensus 295 s~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~G~ll~tl~-gH~~~~~~~~v~sva 372 (485)
+...++.|.+||..++........+...+..+++.|+|.++++.. ++.|.+||.+|.....+. .+... +.+|+
T Consensus 166 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----p~~i~ 240 (270)
T 1rwi_B 166 TDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNT-----PLAVA 240 (270)
T ss_dssp EEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSC-----EEEEE
T ss_pred EECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCC-----ceeEE
Confidence 445789999999998776665555657899999999999999988 999999999866544332 23223 78999
Q ss_pred ECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe
Q 011452 373 ITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGK 409 (485)
Q Consensus 373 fSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk 409 (485)
|+|||+++++.+. +++|+++++...+
T Consensus 241 ~~~~g~l~v~~~~-----------~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 241 VDSDRTVYVADRG-----------NDRVVKLTSLEHH 266 (270)
T ss_dssp ECTTCCEEEEEGG-----------GTEEEEECCCGGG
T ss_pred ECCCCCEEEEECC-----------CCEEEEEcCCCcc
Confidence 9999998888775 6999999976543
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.70 E-value=5.5e-15 Score=144.68 Aligned_cols=233 Identities=10% Similarity=0.097 Sum_probs=173.4
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCccc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~ 184 (485)
+++|++++.|+.+.+||.+||+.+-++.......+++++++|||+.|++ . + ..+..++. +|+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~---~-------~~V~~~d~-~G~~---- 67 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--Y---S-------KGAKMITR-DGRE---- 67 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--C---B-------SEEEEECT-TSCE----
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--C---C-------CCEEEECC-CCCE----
Confidence 6899999999999999998999999887733246899999999998873 1 2 36888885 8886
Q ss_pred ceeeecc--ccCceEEEEeCCCCeEEEEeeC-CCcEEEeecCCCeEEEEEc--C------CcEEEEEEcCCceEEEEEcC
Q 011452 185 ALFESES--LKWPGFVEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSIS--D------KNVQEIKISPGIMLLIFTKA 253 (485)
Q Consensus 185 ~lf~~~~--~~~~~~V~Fs~pnG~~Las~s~-D~tiKlWdl~~g~~l~tl~--~------~~V~~VafSpg~~ll~sss~ 253 (485)
+|+... ...+..+.+. +||++|++.+. ++.|..+|. +|+.+.++. . .....+++.+++.++++..
T Consensus 68 -~W~~~~~~~~~~~~~~~~-~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~- 143 (276)
T 3no2_A 68 -LWNIAAPAGCEMQTARIL-PDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF- 143 (276)
T ss_dssp -EEEEECCTTCEEEEEEEC-TTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET-
T ss_pred -EEEEcCCCCccccccEEC-CCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEec-
Confidence 555421 1234578887 79999999887 777777775 788877663 1 1355678888666666654
Q ss_pred CCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccC------CCceEEEE
Q 011452 254 SGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTE------FMTPSAFI 327 (485)
Q Consensus 254 ~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh------~~~v~ava 327 (485)
.++.|..||.+ |+.+.++... .....+.+. +++..++++..++.|..+|.+||+.+-.+..+ ...+..++
T Consensus 144 -~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~ 219 (276)
T 3no2_A 144 -ATSEVREIAPN-GQLLNSVKLS-GTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLF 219 (276)
T ss_dssp -TTTEEEEECTT-SCEEEEEECS-SCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEE
T ss_pred -CCCEEEEECCC-CCEEEEEECC-CCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccce
Confidence 34799999997 9999999854 345566664 55666666778889999999999998777432 23588999
Q ss_pred EcCCCcEEEEEeCC---------cEEEEeC--CCcEEEEeecCCCC
Q 011452 328 FLYENQLFLTFRNR---------TVAVWNF--RGELVTSFEDHLLW 362 (485)
Q Consensus 328 Fspdg~llaS~sD~---------TIklWd~--~G~ll~tl~gH~~~ 362 (485)
..++|.++++.+++ ..++..+ +|+++-+|..+..+
T Consensus 220 ~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~ 265 (276)
T 3no2_A 220 PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKF 265 (276)
T ss_dssp ECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTS
T ss_pred EcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcccc
Confidence 99999999987533 2345555 37777777776655
No 200
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=2.2e-15 Score=150.17 Aligned_cols=265 Identities=10% Similarity=0.076 Sum_probs=177.1
Q ss_pred ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCccccee---eeccccCceEEEEeCCCCeEEEEeeC
Q 011452 137 EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALF---ESESLKWPGFVEFDDVNGKVLTYSAQ 213 (485)
Q Consensus 137 ~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf---~~~~~~~~~~V~Fs~pnG~~Las~s~ 213 (485)
.....|+++|+|+.+++..... .+ .++||.+..|++.. ++-+ ..+++..|..|+|+ ++|++++..+.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~-~~-------~~~l~~~~~g~~~~-~p~~~~~~~~~~~~p~gv~~d-~~g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFY-QP-------EMQVAELTQDGLIP-FPPQSGNAIITFDTVLGIKSD-GNGIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGG-CC-------SCSEEEEETTEEEE-SCCCCSSCCCCCSCEEEEEEC-SSSEEEEEECH
T ss_pred CCcceEEECCCCCEEEEeCCCC-CC-------ceEEEEECCCCeec-CCCcccCcccceeEeeEEEEc-CCCcEEEEcCC
Confidence 5789999999999887754322 12 14566665555421 1111 11346778899998 78998887654
Q ss_pred -----CCcEEEeecCCCeEEEEEc--C------CcEEEEEEcC-CceEEEEEcC-CCCeeEEEEecCCCeEEEEeecCCc
Q 011452 214 -----DSIYKVFDLKNYTMLYSIS--D------KNVQEIKISP-GIMLLIFTKA-SGHVPLKILSIEDGTVLKSFNHLLH 278 (485)
Q Consensus 214 -----D~tiKlWdl~~g~~l~tl~--~------~~V~~VafSp-g~~ll~sss~-~~D~tIklWdi~tG~~L~tl~~~~~ 278 (485)
+..|.+||+++++++.++. . ..+..|+|+| ++.+.++.+. +.+..|.+||+++|+..+.+.+|..
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~ 166 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG 166 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc
Confidence 6889999999999776663 1 2568999996 6676666431 0357999999999998888865432
Q ss_pred cee-EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC------C
Q 011452 279 RNK-KVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR------G 350 (485)
Q Consensus 279 ~~~-~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~------G 350 (485)
... .+.|. +++..+.+.+.|++++.|.. .++.++|+|||+.|..+. +++ +||.++ +
T Consensus 167 ~~~~~~~~~-~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 167 IAPEDIDLV-IDGVPVQIGQPDGTVIRPHL--------------GVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNL 230 (343)
T ss_dssp TSCCSCCCE-ETTEECBEECTTSCEECCCC--------------CEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCT
T ss_pred cccccccee-ECCEEEEeccCCCceeceec--------------ccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCC
Confidence 211 13343 33444555678888877742 468899999998777776 554 566652 1
Q ss_pred c-----EEE--EeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCC
Q 011452 351 E-----LVT--SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAE 423 (485)
Q Consensus 351 ~-----ll~--tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~ 423 (485)
. ... ...++... ..++++++||.++++... ++.|.+||..+|+.. ++....
T Consensus 231 ~~~~~~~~~~~~~~g~~g~-----pdgia~d~~G~l~va~~~-----------~~~V~~~d~~~G~~~-~~~~~~----- 288 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPI-----CDGISIDKDHNIYVGDLA-----------HSAIGVITSADRAYK-LLVTDE----- 288 (343)
T ss_dssp TCCHHHHHTTCEEEEECCS-----CSCEEECTTCCEEEEEGG-----------GTEEEEEETTTTEEE-EEEECG-----
T ss_pred CCChhhhhcceEecccCCC-----CceEEECCCCCEEEEccC-----------CCeEEEEECCCCCEE-EEEECC-----
Confidence 1 000 12233332 467999999999998765 689999998678743 333221
Q ss_pred cccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcE
Q 011452 424 NECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLV 480 (485)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtV 480 (485)
.+..+++|+|+|||+.+++.+..+.+
T Consensus 289 -------------------------------~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 289 -------------------------------KLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp -------------------------------GGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred -------------------------------ceecCCeeEECCCCcEEEEeCccccc
Confidence 01378999999999999998865544
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=7.1e-14 Score=135.99 Aligned_cols=224 Identities=10% Similarity=0.125 Sum_probs=159.7
Q ss_pred cCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEE
Q 011452 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (485)
Q Consensus 193 ~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~t 272 (485)
.+.....|++.++.++.+...+++|..||.++++....-....+..++++|++.++++. +..|.+||.++|+....
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATI----GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEE----TTEEEEEETTTTEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEE----CCeEEEEECCCCcEEEE
Confidence 34557888855788888888899999999998876332235689999999877777764 24899999999876433
Q ss_pred eec----CCcceeEEEEEecCCCEEEEEe-C--------CCcEEEEECCC-CeeEEecccCCCceEEEEEcCCCcEE-EE
Q 011452 273 FNH----LLHRNKKVDFIEQFNEKLLVKQ-E--------NENLQILDVRN-FELTEVSRTEFMTPSAFIFLYENQLF-LT 337 (485)
Q Consensus 273 l~~----~~~~~~~V~f~~~~~~~lls~s-~--------D~tIkIWDv~t-g~~~~~l~gh~~~v~avaFspdg~ll-aS 337 (485)
... .......+++. +++..+++.. . ..+-+||.+.. ++... +..+...++.++|+|||+.| ++
T Consensus 89 ~~~~~~~~~~~~~di~~d-~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVD-PAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EECCTTCSSEEEEEEEEC-TTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCCCCCCEEEC-CCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEe
Confidence 221 11235678875 5565444432 2 24567776653 44433 33455678999999999855 56
Q ss_pred Ee-CCcEEEEeC--C-CcE-----EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCC
Q 011452 338 FR-NRTVAVWNF--R-GEL-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTG 408 (485)
Q Consensus 338 ~s-D~TIklWd~--~-G~l-----l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TG 408 (485)
.+ ++.|.+||+ . |++ +..+..+... ..++++.+||.+.++... .+.|..||..||
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~-----p~g~~~d~~G~lwva~~~-----------~~~v~~~d~~tG 230 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI-----PDGMCIDAEGKLWVACYN-----------GGRVIRLDPVTG 230 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCE-----EEEEEEBTTSCEEEEEET-----------TTEEEEECTTTC
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCC-----CCeeEECCCCCEEEEEcC-----------CCEEEEEcCCCc
Confidence 66 899999986 3 654 2333333222 679999999998888764 588999999999
Q ss_pred eEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEc-CCCCEEEEecC
Q 011452 409 KCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYD-EDRNEIYTGNR 476 (485)
Q Consensus 409 k~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fs-pDg~~LaSgs~ 476 (485)
+++.++..+. ..+++++|+ ||+++|+-++.
T Consensus 231 ~~~~~i~~p~--------------------------------------~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 KRLQTVKLPV--------------------------------------DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEECSS--------------------------------------SBEEEEEEESGGGCEEEEEEB
T ss_pred eEEEEEECCC--------------------------------------CCceEEEEeCCCCCEEEEEcC
Confidence 9999998764 278999999 99998766553
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=1.9e-12 Score=122.00 Aligned_cols=264 Identities=10% Similarity=0.042 Sum_probs=185.3
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee-ccccCceEEEEeCCCCeEEEEeeC
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQ 213 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~ 213 (485)
.....++|++.|+|..+++.. .. ..+.+++.. |+.. .+.. .....+..++++ ++|.+.++...
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~---~~-------~~v~~~~~~-~~~~----~~~~~~~~~~~~~i~~~-~~g~l~v~~~~ 81 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQH---KA-------NKISSLDQS-GRIK----EFEVPTPDAKVMCLIVS-SLGDIWFTENG 81 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEET---TT-------TEEEEECTT-SCEE----EEECSSTTCCEEEEEEC-TTSCEEEEETT
T ss_pred CCCCcceeeECCCCCEEEEcC---CC-------CeEEEECCC-CceE----EEECCCCCCcceeEEEC-CCCCEEEEecC
Confidence 345789999999999776532 12 367777754 6542 1221 123567789997 79999888777
Q ss_pred CCcEEEeecCCCeEE-EEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEE-EeecCCcceeEEEEEecC
Q 011452 214 DSIYKVFDLKNYTML-YSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLK-SFNHLLHRNKKVDFIEQF 289 (485)
Q Consensus 214 D~tiKlWdl~~g~~l-~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~-tl~~~~~~~~~V~f~~~~ 289 (485)
++.|..+|.+ ++.. +.+. ...+..+++.|++.+.++... +..|..+|.. |+... .+.........+++. ++
T Consensus 82 ~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d-~~ 156 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN--GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG-SD 156 (300)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT--TTEEEEECTT-SCEEEEECSSTTCCEEEEEEC-TT
T ss_pred CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC--CCeEEEECCC-CCEEEccCCCCCCCceeEEEC-CC
Confidence 8999999988 6643 3333 357999999987777776442 3689999987 77653 233334556778875 45
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEe-cccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCCCcEEEE-eecCCCCCCCC
Q 011452 290 NEKLLVKQENENLQILDVRNFELTEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPDC 366 (485)
Q Consensus 290 ~~~lls~s~D~tIkIWDv~tg~~~~~-l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~G~ll~t-l~gH~~~~~~~ 366 (485)
+..+++...++.|..+|. +++.... +..+...+..+++.++|+++++.. ++.|.+||.+|+.... +..+...
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~---- 231 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNAR---- 231 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCC----
T ss_pred CCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCC----
Confidence 553444456889999999 6665543 334566899999999999999887 7889999998776543 3333322
Q ss_pred CeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEE-ecCCCCCCCCcccccCCCCCCCCccccccccc
Q 011452 367 NTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAK-IRASNGLPAENECSCSGDYSSGSCNVKKHSHA 445 (485)
Q Consensus 367 ~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (485)
+.+|+++|+|++.++... ++.|..+|. +|+.... +..+.
T Consensus 232 -~~~i~~d~~g~l~v~~~~-----------~~~i~~~~~-~g~~~~~~~~~~~--------------------------- 271 (300)
T 2qc5_A 232 -PHAITAGKNSEIWFTEWG-----------ANQIGRITN-DNTIQEYQLQTEN--------------------------- 271 (300)
T ss_dssp -EEEEEECSTTCEEEEETT-----------TTEEEEECT-TSCEEEEECCSTT---------------------------
T ss_pred -ceEEEECCCCCEEEeccC-----------CCeEEEECC-CCcEEEEECCccC---------------------------
Confidence 789999999998887643 589999997 5764422 22111
Q ss_pred cccccchhcccCCeEEEEEcCCCCEEEEec
Q 011452 446 SRIRSTVAEALEDITALFYDEDRNEIYTGN 475 (485)
Q Consensus 446 ~~~~~~~~~~l~~V~sl~fspDg~~LaSgs 475 (485)
..+.+++++|+|+..++..
T Consensus 272 -----------~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 272 -----------AEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp -----------CCCCCEEECTTSCEEEECS
T ss_pred -----------CccceeEeCCCCCEEEEcc
Confidence 2677899999999877776
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=2.2e-12 Score=139.71 Aligned_cols=302 Identities=8% Similarity=0.023 Sum_probs=205.8
Q ss_pred ceEEEEEe--cCEEEEEeCCCeEEeeecc--cCcEEEEeecCCcccEEEEEEe----eCCCEEEEEEeecCCCCccccee
Q 011452 97 KIIEIVAA--RDIVFALAQSGVCAAFCRE--TNQRICFLNVTADEVIRSLFYN----KNNDSLITVSVYASDNFSSLRCR 168 (485)
Q Consensus 97 ~V~~i~~s--~~~ias~s~dgtiklW~~~--tG~~l~tl~g~~~~~i~sv~~s----pdg~~Las~S~d~~~d~stL~~~ 168 (485)
.+..++|+ |.++++++.|+++.+||+. +++.+.++..+. .-+.++|| |||+.|++++... .
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--~P~~ia~s~~~~pDGk~l~v~n~~~---------~ 266 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--EARSIETSKMEGWEDKYAIAGAYWP---------P 266 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--EEEEEEECCSTTCTTTEEEEEEEET---------T
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC--CCceeEEccccCCCCCEEEEEEccC---------C
Confidence 45678888 8999999999999999995 899999887643 36899999 7999998877532 4
Q ss_pred EEEEeEeccCCcCcccceeeec------c-ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEE--EEEc-CCcEEE
Q 011452 169 STRIEYIRRGKPDAGFALFESE------S-LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML--YSIS-DKNVQE 238 (485)
Q Consensus 169 t~~lw~i~~G~~~~~~~lf~~~------~-~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l--~tl~-~~~V~~ 238 (485)
++.++|..+.++.+..++-... + ...+..+.+++.+...+++...+++|.++|..+.+.+ .++. +.....
T Consensus 267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d 346 (567)
T 1qks_A 267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHD 346 (567)
T ss_dssp EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEE
T ss_pred eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccC
Confidence 7888898777764322221110 0 0123467777434555666677899999998876532 3333 457889
Q ss_pred EEEcCCceE-EEEEcCCCCeeEEEEecCCCeEEEEeec-C--CcceeEEEEEecCCCEEEEEe--CCCcEEEEECCC---
Q 011452 239 IKISPGIML-LIFTKASGHVPLKILSIEDGTVLKSFNH-L--LHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRN--- 309 (485)
Q Consensus 239 VafSpg~~l-l~sss~~~D~tIklWdi~tG~~L~tl~~-~--~~~~~~V~f~~~~~~~lls~s--~D~tIkIWDv~t--- 309 (485)
+.|+|++++ ++++.. +.+|.++|+++|+++.++.- - -|.-..+.|..|+++.+.+.+ .+++|-++|..+
T Consensus 347 ~~~~pdgr~~~va~~~--sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~ 424 (567)
T 1qks_A 347 GGLDGSHRYFITAANA--RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGH 424 (567)
T ss_dssp EEECTTSCEEEEEEGG--GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred ceECCCCCEEEEEeCC--CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCC
Confidence 999986654 444433 36899999999999888763 1 111234556557666666554 579999999998
Q ss_pred ----CeeEEecccCCCceEEEEEcCCCcEEEEEe----C----CcEEEEeCC-C-----c-EEEEee-c--CCCCCCCCC
Q 011452 310 ----FELTEVSRTEFMTPSAFIFLYENQLFLTFR----N----RTVAVWNFR-G-----E-LVTSFE-D--HLLWHPDCN 367 (485)
Q Consensus 310 ----g~~~~~l~gh~~~v~avaFspdg~llaS~s----D----~TIklWd~~-G-----~-ll~tl~-g--H~~~~~~~~ 367 (485)
.+.++++.+.......+.++||++.|-... | ++|.++|+. . + .+..+. + .........
T Consensus 425 ~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 504 (567)
T 1qks_A 425 PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPR 504 (567)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCE
T ss_pred ccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcc
Confidence 567777765544445577899998766544 2 499999985 5 1 223332 0 000000112
Q ss_pred eeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 368 TNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 368 v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
+..+.|+|||+++..+....+++ ++.|-+.|.+|++++++|++.
T Consensus 505 ~~~~~~~~~G~~~~~s~~~~~~~------~~~i~v~D~~t~~~~~~i~~~ 548 (567)
T 1qks_A 505 VVQGEFNKDGTEVWFSVWNGKDQ------ESALVVVDDKTLELKHVIKDE 548 (567)
T ss_dssp EEEEEECTTSSEEEEEEECCTTS------CCEEEEEETTTTEEEEEECCT
T ss_pred eEeeeECCCCCEEEEEeecCCCC------CCcEEEEECCCceEEEEeCCC
Confidence 78999999999887764311112 689999999999999999863
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.63 E-value=1.5e-12 Score=133.06 Aligned_cols=284 Identities=10% Similarity=0.039 Sum_probs=182.0
Q ss_pred EEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEee----------
Q 011452 143 FYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA---------- 212 (485)
Q Consensus 143 ~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s---------- 212 (485)
...|+++.+..+... ..+ .+. ++.++|..++++.. .+..+ ..+ .++|+ |||+.|..+.
T Consensus 27 ~~~~~~~~~yv~~~~-~~~--~~~--~v~v~D~~t~~~~~---~i~~g--~~p-~i~~s-pDg~~lyv~n~~~~~~~rg~ 94 (373)
T 2mad_H 27 APGADGRRSYINLPA-HHS--AII--QQWVLDAGSGSILG---HVNGG--FLP-NPVAA-HSGSEFALASTSFSRIAKGK 94 (373)
T ss_pred cCCCCCCEEEEeCCc-ccC--Ccc--EEEEEECCCCeEEE---EecCC--CCC-CeEEC-CCCCEEEEEeccccccccCC
Confidence 345777765543210 121 122 77888888887632 12222 234 89998 7999887764
Q ss_pred CCCcEEEeecCCCeEEEEEcC---------CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEE-eecCCcceeE
Q 011452 213 QDSIYKVFDLKNYTMLYSISD---------KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS-FNHLLHRNKK 282 (485)
Q Consensus 213 ~D~tiKlWdl~~g~~l~tl~~---------~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~t-l~~~~~~~~~ 282 (485)
.|++|-+||+.+++.+.++.- ..-..++|||+++.|..+....+.+|-++| ++|+++++ +.- . ..
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--~--~~ 169 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--P--TC 169 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--C--ce
Confidence 378999999999998877742 234579999866655544332246899999 99999988 652 1 12
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecc------cCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-C--cE
Q 011452 283 VDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR------TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-G--EL 352 (485)
Q Consensus 283 V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~------gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G--~l 352 (485)
+.+.+..+..+++.+.|+++.++|. +++...... +.........|++++..++-.+ .++|.+.|+. + +.
T Consensus 170 ~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v 248 (373)
T 2mad_H 170 YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN 248 (373)
T ss_pred EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE
Confidence 4554333344455579999999999 887663321 1111112245677665544444 7889999986 3 23
Q ss_pred EEEeec------CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCccc
Q 011452 353 VTSFED------HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENEC 426 (485)
Q Consensus 353 l~tl~g------H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~ 426 (485)
+.+++- ...|.|.+ ...++|+|||+.|..+.....++ .-...+++|-+.|+.|++.+++|..-.
T Consensus 249 ~~~~~~~~~~~~~~~~~p~g-~~~~~~s~d~~~lyV~~~~~~~~-~~~~~~~~V~VID~~t~~vv~~i~~g~-------- 318 (373)
T 2mad_H 249 KAPIDALSGGRKADTWRPGG-WQQVAYLKSSDGIYLLTSEQSAW-KLHAAAKEVTSVTGLVGQTSSQISLGH-------- 318 (373)
T ss_pred eeeeeecCCcccccceecCc-eEeEEECCCCCEEEEEeccCCcc-cccCCCCeEEEEECCCCEEEEEEECCC--------
Confidence 344421 12233333 35589999999887765310000 000114689999999999999996422
Q ss_pred ccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCC-EEEEec-CCCcEEEccC
Q 011452 427 SCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRN-EIYTGN-RHGLVHVWSN 485 (485)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~-~LaSgs-~DgtVklWd~ 485 (485)
..++++|+|||+ .||+++ .+++|.|+|.
T Consensus 319 -------------------------------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 319 -------------------------------DVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred -------------------------------CcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 467899999999 899998 5999999983
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.59 E-value=2.6e-13 Score=148.28 Aligned_cols=251 Identities=14% Similarity=0.068 Sum_probs=173.3
Q ss_pred CcccEEEEEEeeCCCEEEEEEe-ecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCc--eEEEEeCCCCeEEEEe
Q 011452 135 ADEVIRSLFYNKNNDSLITVSV-YASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWP--GFVEFDDVNGKVLTYS 211 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~-d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~--~~V~Fs~pnG~~Las~ 211 (485)
+...+.++.|||||+.||-++. .|++. .+++++|+.+|+... . .+.+. ..++|+ ||+.|+++
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~------~~i~v~dl~tg~~~~---~----~~~~~k~~~~~Ws--Dg~~l~y~ 191 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDW------REIHLMDVESKQPLE---T----PLKDVKFSGISWL--GNEGFFYS 191 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCE------EEEEEEETTTCSEEE---E----EEEEEESCCCEEE--TTTEEEEE
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCce------EEEEEEECCCCCCCc---c----ccCCceeccEEEe--CCCEEEEE
Confidence 4457999999999999986554 34444 689999999998621 1 11122 367897 89999999
Q ss_pred eCCCc-------------EEEeecCCCe----EEEEEcC---CcEEEEEEcCCce-EEEEEcCC-CCeeEEEEecCCCe-
Q 011452 212 AQDSI-------------YKVFDLKNYT----MLYSISD---KNVQEIKISPGIM-LLIFTKAS-GHVPLKILSIEDGT- 268 (485)
Q Consensus 212 s~D~t-------------iKlWdl~~g~----~l~tl~~---~~V~~VafSpg~~-ll~sss~~-~D~tIklWdi~tG~- 268 (485)
+.|.+ |++|++.++. +++...+ ..+.++.+||++. |+++...+ ....|.+||+.+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 98855 9999998764 5555544 2578999998665 44443322 23589999998874
Q ss_pred EEEEeecCCcceeEEEEEecCCCEEEEEe-C---CCcEEEEECCCCee--EEecccCCCceEEEEEcCCCcEEEEEe--C
Q 011452 269 VLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-E---NENLQILDVRNFEL--TEVSRTEFMTPSAFIFLYENQLFLTFR--N 340 (485)
Q Consensus 269 ~L~tl~~~~~~~~~V~f~~~~~~~lls~s-~---D~tIkIWDv~tg~~--~~~l~gh~~~v~avaFspdg~llaS~s--D 340 (485)
.++.+..+......+ +. +++++|+..+ . ...|.+||+.++++ .+.+..|...+. .|+|+++.|+... |
T Consensus 272 ~~~~l~~~~~~~~~~-~~-~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 272 PLLTVQGDLDADVSL-VD-NKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp CCEEEECSSSSCEEE-EE-EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET
T ss_pred ceEEEeCCCCceEEE-Ee-ccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEEC
Confidence 466676555555444 33 5677777754 3 36899999998765 344556666665 8999999887766 5
Q ss_pred C--cEEEEeCCCcEEEEeec-CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 341 R--TVAVWNFRGELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 341 ~--TIklWd~~G~ll~tl~g-H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
+ .|++||++|...+.+.- +... +..+.++||++.|+-...+ ...-++|.+||+.+|+. ..|...
T Consensus 348 g~~~l~~~d~~g~~~~~l~~p~~~~-----~~~~~~~~d~~~l~~~~ss-------~~tP~~l~~~d~~~g~~-~~l~~~ 414 (693)
T 3iuj_A 348 ATARVEQFDYEGKRVREVALPGLGS-----VSGFNGKHDDPALYFGFEN-------YAQPPTLYRFEPKSGAI-SLYRAS 414 (693)
T ss_dssp TEEEEEEECTTSCEEEEECCSSSSE-----EEECCCCTTCSCEEEEEEC-------SSSCCEEEEECTTTCCE-EEEECC
T ss_pred CeeEEEEEECCCCeeEEeecCCCce-----EEeeecCCCCCEEEEEecC-------CCCCCEEEEEECCCCeE-EEEEeC
Confidence 4 78999998777666642 2222 7788889999877655431 11237999999998874 445543
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=1.7e-11 Score=115.47 Aligned_cols=261 Identities=10% Similarity=0.045 Sum_probs=182.2
Q ss_pred ccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEE
Q 011452 95 RSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (485)
Q Consensus 95 ~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~l 172 (485)
.+.+..|++. |.+.++...++.+..|+.. |+........+...+.+|++.++|..+++.. .+ ..+..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~------~~v~~ 87 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTEN----GA------NKIGK 87 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEET----TT------TEEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEec----CC------CeEEE
Confidence 3456677777 7777777788999999987 7765432222335799999999999776522 12 35666
Q ss_pred eEeccCCcCcccceeee-ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEE-EEEc--CCcEEEEEEcCCceEE
Q 011452 173 EYIRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--DKNVQEIKISPGIMLL 248 (485)
Q Consensus 173 w~i~~G~~~~~~~lf~~-~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l-~tl~--~~~V~~VafSpg~~ll 248 (485)
++.. |+.. .+.. .....+..++++ ++|+++++...++.|..+|.+ ++.. +.+. ...+..+++.|++.+.
T Consensus 88 ~d~~-g~~~----~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~ 160 (300)
T 2qc5_A 88 LSKK-GGFT----EYPLPQPDSGPYGITEG-LNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALW 160 (300)
T ss_dssp ECTT-SCEE----EEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEE
T ss_pred ECCC-CCeE----EecCCCCCCCCccceEC-CCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEE
Confidence 6754 6641 2221 123457789997 799998888778899999987 6654 3343 3579999999877776
Q ss_pred EEEcCCCCeeEEEEecCCCeEEEE-eecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEe-cccCCCceEEE
Q 011452 249 IFTKASGHVPLKILSIEDGTVLKS-FNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEV-SRTEFMTPSAF 326 (485)
Q Consensus 249 ~sss~~~D~tIklWdi~tG~~L~t-l~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~-l~gh~~~v~av 326 (485)
++... ...|..+|. +|+.... +..+......+++. +++..+++...++.|.+||. +++.... +..+...+.++
T Consensus 161 v~~~~--~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i 235 (300)
T 2qc5_A 161 FTENQ--NNSIGRITN-TGKLEEYPLPTNAAAPVGITSG-NDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAI 235 (300)
T ss_dssp EEETT--TTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred EEecC--CCeEEEECC-CCcEEEeeCCCCCCCcceEEEC-CCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEE
Confidence 66443 368999998 7776542 22333456688875 44544444456788999999 5665544 44566789999
Q ss_pred EEcCCCcEEEEEe-CCcEEEEeCCCcEEE-EeecCCCCCCCCCeeEEEECCCCCEEEEE
Q 011452 327 IFLYENQLFLTFR-NRTVAVWNFRGELVT-SFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (485)
Q Consensus 327 aFspdg~llaS~s-D~TIklWd~~G~ll~-tl~gH~~~~~~~~v~svafSpDG~~LaS~ 383 (485)
++.++|+++++.. ++.|..+|.+|+... .+..+... +.+|+++|+|++.++.
T Consensus 236 ~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~-----~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 236 TAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAE-----PHGITFGKDGSVWFAL 289 (300)
T ss_dssp EECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCC-----CCCEEECTTSCEEEEC
T ss_pred EECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCc-----cceeEeCCCCCEEEEc
Confidence 9999999999887 899999999876543 23323222 7899999999988863
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=1.2e-12 Score=125.24 Aligned_cols=233 Identities=12% Similarity=0.094 Sum_probs=159.8
Q ss_pred ceEEEEEe--cCEEEE-------EeCCCeEEeeecccCcEEEEee---cCCcccEEEEEEeeC-CCEEEEEEeecCCCCc
Q 011452 97 KIIEIVAA--RDIVFA-------LAQSGVCAAFCRETNQRICFLN---VTADEVIRSLFYNKN-NDSLITVSVYASDNFS 163 (485)
Q Consensus 97 ~V~~i~~s--~~~ias-------~s~dgtiklW~~~tG~~l~tl~---g~~~~~i~sv~~spd-g~~Las~S~d~~~d~s 163 (485)
....+++. +.++++ ...++.+..|+..+|+...... .++...+.+++++|+ |+.+++.+ .+
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~----~~-- 92 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM----RL-- 92 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET----TT--
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC----CC--
Confidence 34567776 666666 5788999999988888654322 013356899999999 77665422 22
Q ss_pred ccceeEEEEeEeccCCcCcccce-eee---ccccCceEEEEeCCCCeEEEEeeCC---------------CcEEEeecCC
Q 011452 164 SLRCRSTRIEYIRRGKPDAGFAL-FES---ESLKWPGFVEFDDVNGKVLTYSAQD---------------SIYKVFDLKN 224 (485)
Q Consensus 164 tL~~~t~~lw~i~~G~~~~~~~l-f~~---~~~~~~~~V~Fs~pnG~~Las~s~D---------------~tiKlWdl~~ 224 (485)
.+.+++.. |++.. + ... .....+..++|+ ++|+++++...+ +.|..||.+
T Consensus 93 -----~l~~~d~~-g~~~~---~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 93 -----GLLVVQTD-GTFEE---IAKKDSEGRRMQGCNDCAFD-YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp -----EEEEEETT-SCEEE---CCSBCTTSCBCBCCCEEEEC-TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred -----CEEEEeCC-CCEEE---EEeccCCCccccCCcCEEEC-CCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 56677865 76521 1 111 122457789998 799988877655 456666665
Q ss_pred CeEEEEEc-CCcEEEEEEc----CCc-eEEEEEcCCCCeeEEEEecC-CCe-----EEEEeecCC-cceeEEEEEecCCC
Q 011452 225 YTMLYSIS-DKNVQEIKIS----PGI-MLLIFTKASGHVPLKILSIE-DGT-----VLKSFNHLL-HRNKKVDFIEQFNE 291 (485)
Q Consensus 225 g~~l~tl~-~~~V~~VafS----pg~-~ll~sss~~~D~tIklWdi~-tG~-----~L~tl~~~~-~~~~~V~f~~~~~~ 291 (485)
++...... ......++|+ |++ .+.++... +..|.+||+. +|+ .+..+.++. .....+++. +++.
T Consensus 162 g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~ 238 (314)
T 1pjx_A 162 GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP--TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD-EDNN 238 (314)
T ss_dssp SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT--TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB-TTCC
T ss_pred CCEEEeccCCCCcceEEEecccCCCCCEEEEEECC--CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC-CCCC
Confidence 66543332 2467889999 987 45555332 3689999986 675 334444433 455678875 5565
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCc-EEEEEe-CCcEEEEeCC
Q 011452 292 KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR 349 (485)
Q Consensus 292 ~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~-llaS~s-D~TIklWd~~ 349 (485)
.+++...++.|.+||.++++.+..+..+...+.+++|+|||+ ++++.. ++.|..|++.
T Consensus 239 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 239 LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 555556889999999998888777777778899999999999 666666 7899999985
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.58 E-value=7.5e-12 Score=127.93 Aligned_cols=266 Identities=8% Similarity=-0.071 Sum_probs=177.6
Q ss_pred eEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEee------cCCCCcccceeEEEEeEeccCCcCccccee-e
Q 011452 116 VCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVY------ASDNFSSLRCRSTRIEYIRRGKPDAGFALF-E 188 (485)
Q Consensus 116 tiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d------~~~d~stL~~~t~~lw~i~~G~~~~~~~lf-~ 188 (485)
++.++|..+++.+.++..+. .. .++|||||+.|..+... +..+ .++.++|+.+++.....++- .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~-~p--~i~~spDg~~lyv~n~~~~~~~rg~~~------~~v~viD~~t~~~~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGF-LP--NPVAAHSGSEFALASTSFSRIAKGKRT------DYVEVFDPVTFLPIADIELPDA 118 (373)
T ss_pred EEEEEECCCCeEEEEecCCC-CC--CeEECCCCCEEEEEeccccccccCCCC------CeEEEEECCCCcEEEEEECCCc
Confidence 89999999999999887643 23 99999999999876532 1112 37888888777663322211 0
Q ss_pred e--ccccCceEEEEeCCCCeEEEEeeC--CCcEEEeecCCCeEEEE-EcCCcEEEEEEcC-CceEEEEEcCCCCeeEEEE
Q 011452 189 S--ESLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYS-ISDKNVQEIKISP-GIMLLIFTKASGHVPLKIL 262 (485)
Q Consensus 189 ~--~~~~~~~~V~Fs~pnG~~Las~s~--D~tiKlWdl~~g~~l~t-l~~~~V~~VafSp-g~~ll~sss~~~D~tIklW 262 (485)
. ....+|..++|+ |||++|..+.. +++|-++| ++++.+.+ +.-.. ++.+.| +...+++.. .|+.+.++
T Consensus 119 ~~~~~g~~p~~~~~s-pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~--~~~~~~~~~~~~~~~~--~dg~~~~v 192 (373)
T 2mad_H 119 PRFDVGPYSWMNANT-PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT--CYHIHPGAPSTFYLLC--AQGGLAKT 192 (373)
T ss_pred cccccCCCccceEEC-CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc--eEEEEeCCCceEEEEc--CCCCEEEE
Confidence 0 012457789998 89999887764 58899999 99999888 75321 245555 333333333 45789999
Q ss_pred ecCCCeEEEEee------cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCe--eEEeccc-------C---CCceE
Q 011452 263 SIEDGTVLKSFN------HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFE--LTEVSRT-------E---FMTPS 324 (485)
Q Consensus 263 di~tG~~L~tl~------~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~--~~~~l~g-------h---~~~v~ 324 (485)
|. +|+...... +.........|. ++++.++..+.++++.+.|+.++. .+..+.- . .....
T Consensus 193 d~-~g~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 270 (373)
T 2mad_H 193 DH-AGGAAGAGLVGAMLTAAQNLLTQPAQA-NKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ 270 (373)
T ss_pred EC-CCcEEEEEeccccccCCcceeecceeE-ecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceE
Confidence 99 998874322 111111123454 445666655577899999997653 2222210 0 11233
Q ss_pred EEEEcCCCcEEEEEe-C----------CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCC-EEEEEecCCCCCC
Q 011452 325 AFIFLYENQLFLTFR-N----------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDP 391 (485)
Q Consensus 325 avaFspdg~llaS~s-D----------~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~-~LaS~s~d~~~d~ 391 (485)
.++|+||++.+..+. + ++|-+.|.. ++.+.++..-. . .+.++|||||+ +|+++..
T Consensus 271 ~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~-----p~~i~~s~Dg~~~l~v~~~------ 338 (373)
T 2mad_H 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-D-----VDAISVAQDGGPDLYALSA------ 338 (373)
T ss_pred eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-C-----cCeEEECCCCCeEEEEEcC------
Confidence 478899988766543 2 479999996 89989886432 1 57999999999 7777653
Q ss_pred CCcCCCCeEEEEeCCCCeEEEEe
Q 011452 392 LAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 392 ~~~~~DgtIklWdl~TGk~l~tl 414 (485)
.+++|-++|+.|++.++++
T Consensus 339 ----~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 339 ----GTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ----CCCeEEEEECCCCCEEeee
Confidence 2699999999999999985
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.56 E-value=2.9e-12 Score=133.14 Aligned_cols=288 Identities=12% Similarity=0.088 Sum_probs=184.6
Q ss_pred cCEEEEEeC-----CCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCC
Q 011452 105 RDIVFALAQ-----SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGK 179 (485)
Q Consensus 105 ~~~ias~s~-----dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~ 179 (485)
+..|+.... ++++.+.|..|++.+.++..+.. + . +++||||+.|..++.+.+.....=.-.++.+||..+++
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 566666655 68999999999999999987544 4 4 99999999987766421100000001479999998888
Q ss_pred cCcccceee-e--ccccCceEEEEeCCCCeEEEEee--CCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCC
Q 011452 180 PDAGFALFE-S--ESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKAS 254 (485)
Q Consensus 180 ~~~~~~lf~-~--~~~~~~~~V~Fs~pnG~~Las~s--~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~ 254 (485)
.....++-. . ....+|..++|+ |||++|..+. .+++|-|+|+++++.+.++.-... ...+..+...+.+.+
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~s-pDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~~~~~~-- 196 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLT-PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFFMHC-- 196 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEEC-TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEE--
T ss_pred EEEEEECCCccccccCCCCceEEEc-CCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCceeEEEC--
Confidence 633222110 0 012367789998 7999766654 378999999999999999863222 122222322221212
Q ss_pred CCeeEEEEecCC-CeEEEEeecCC----ccee-EEEEEecCCCEEEEEeCCCcEEEEECCCCee--EEecc---------
Q 011452 255 GHVPLKILSIED-GTVLKSFNHLL----HRNK-KVDFIEQFNEKLLVKQENENLQILDVRNFEL--TEVSR--------- 317 (485)
Q Consensus 255 ~D~tIklWdi~t-G~~L~tl~~~~----~~~~-~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~--~~~l~--------- 317 (485)
.|+++-+.++.+ |+...+...+. ..+. ..+|..+ +++++..+.+++|.+.|+.++.. +....
T Consensus 197 ~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~-dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~ 275 (386)
T 3sjl_D 197 RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK-AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD 275 (386)
T ss_dssp TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT-TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHT
T ss_pred CCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC-CCcEEEEeCCCEEEEEECCCCcceeecceeccccccccc
Confidence 235566666665 66543332111 1111 2466544 45777777789999999987642 22111
Q ss_pred c-CCCceEEEEEcCCCcEEEEEe-C----------CcEEEEeCC-CcEEEEee-cCCCCCCCCCeeEEEECCCCC-EEEE
Q 011452 318 T-EFMTPSAFIFLYENQLFLTFR-N----------RTVAVWNFR-GELVTSFE-DHLLWHPDCNTNNIYITSDQD-LIIS 382 (485)
Q Consensus 318 g-h~~~v~avaFspdg~llaS~s-D----------~TIklWd~~-G~ll~tl~-gH~~~~~~~~v~svafSpDG~-~LaS 382 (485)
+ .......++++|+++.+--.. + ++|-+-|+. ++.+.++. ++. +++|+|||||+ +|.+
T Consensus 276 g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~-------~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 276 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE-------IDSINVSQDEKPLLYA 348 (386)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-------ECEEEECSSSSCEEEE
T ss_pred cccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC-------cceEEECCCCCeEEEE
Confidence 0 011222467798888766653 1 478888995 99988875 332 78999999997 7776
Q ss_pred EecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 383 YCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 383 ~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
.+. .+++|-++|..|++.++++..-
T Consensus 349 tn~----------~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 349 LST----------GDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EET----------TTTEEEEEETTTCCEEEEECCC
T ss_pred EcC----------CCCeEEEEECCCCcEEEEecCC
Confidence 654 2699999999999999999653
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.56 E-value=5.8e-12 Score=124.70 Aligned_cols=221 Identities=10% Similarity=0.030 Sum_probs=152.1
Q ss_pred CceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEe
Q 011452 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSF 273 (485)
Q Consensus 194 ~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl 273 (485)
.+....|++.++.++.++..++.|.+||.++++....-....|.+++++|++.++++.. ..|.+||.++|+.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~~----~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIASD----DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEET----TEEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEEC----CCEEEEECCCCcEEEEe
Confidence 34567888434777788878899999999988754322356899999998777777642 24999999999864322
Q ss_pred ec---C-CcceeEEEEEecCCCEEEEEeC----CCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEE-EEEe-CCcE
Q 011452 274 NH---L-LHRNKKVDFIEQFNEKLLVKQE----NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLF-LTFR-NRTV 343 (485)
Q Consensus 274 ~~---~-~~~~~~V~f~~~~~~~lls~s~----D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~ll-aS~s-D~TI 343 (485)
.. + ...+..+++. +++..+++... ..+.+||.+.+++..... .+...++.++|+|||+.| ++.+ ++.|
T Consensus 126 ~~~~~~~~~~~~~i~~d-~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMH-PSGALWIGTMGRKAETGAGSIYHVAKGKVTKLF-ADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp CSSTTCTTEEEEEEEEC-TTSCEEEEEEETTCCTTCEEEEEEETTEEEEEE-EEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred eCCCCCCCCCCCCEEEC-CCCCEEEEeCCCcCCCCceEEEEEeCCcEEEee-CCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 21 1 1345678875 55554443332 134555554466655433 344578899999999865 5555 8899
Q ss_pred EEEeCC---C-c-----EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 344 AVWNFR---G-E-----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 344 klWd~~---G-~-----ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
.+||++ | + .+..+.++... ..++++.+||.+.++... ++.|.+||. +|+.+.++
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~-----p~gi~~d~~G~lwva~~~-----------~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGG-----MDGSVCDAEGHIWNARWG-----------EGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSE-----EEEEEECTTSCEEEEEET-----------TTEEEEECT-TCCEEEEE
T ss_pred EEEEcccccCCcccCceEEEECCCCCCC-----CCeeEECCCCCEEEEEeC-----------CCEEEEECC-CCCEEEEE
Confidence 999973 6 3 23344333222 678999999998887654 578999998 68988888
Q ss_pred cCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEc-CCCCEEEEec
Q 011452 415 RASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYD-EDRNEIYTGN 475 (485)
Q Consensus 415 ~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fs-pDg~~LaSgs 475 (485)
..+. ..+++++|+ ||++.|+.++
T Consensus 267 ~~~~--------------------------------------~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 267 EVPG--------------------------------------KQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp ECSC--------------------------------------SBEEEEEEESTTSCEEEEEE
T ss_pred ECCC--------------------------------------CCcEEEEEecCCCCEEEEEe
Confidence 7654 278999999 9998775544
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=1.1e-13 Score=137.81 Aligned_cols=221 Identities=10% Similarity=0.067 Sum_probs=155.9
Q ss_pred cCceEEEEeCCCCeEEEEee--CCCcEEEeecCCCeEEEEEc---------CCcEEEEEEcCCceEEEEEcCC---CCee
Q 011452 193 KWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSIS---------DKNVQEIKISPGIMLLIFTKAS---GHVP 258 (485)
Q Consensus 193 ~~~~~V~Fs~pnG~~Las~s--~D~tiKlWdl~~g~~l~tl~---------~~~V~~VafSpg~~ll~sss~~---~D~t 258 (485)
.+|..|+|+ ++|+++++.. .++.++||.+.+|++. .+. -..+..|+|+|++.|.+..... .+..
T Consensus 17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 578899998 7999999864 2344788887777643 332 1379999999988887764320 0358
Q ss_pred EEEEecCCCeEEEEeecC------CcceeEEEEEecCCCEEEEE-e---CCCcEEEEECCCCeeEEecccCCCc-eEEEE
Q 011452 259 LKILSIEDGTVLKSFNHL------LHRNKKVDFIEQFNEKLLVK-Q---ENENLQILDVRNFELTEVSRTEFMT-PSAFI 327 (485)
Q Consensus 259 IklWdi~tG~~L~tl~~~------~~~~~~V~f~~~~~~~lls~-s---~D~tIkIWDv~tg~~~~~l~gh~~~-v~ava 327 (485)
|.+||+++|++++++... ......|+|. ++++.+.++ . .++.|.+||+.+++..+++.+|... ...+.
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd-~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVD-LIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEE-TTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEe-cCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 999999999998887632 1234688886 445666555 4 6899999999999998888776322 21256
Q ss_pred EcCCCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC
Q 011452 328 FLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 328 Fspdg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
|+++|+.|.+.+ |++++.|.. . ++.|+|||||++|..+.. ++. +||.+.
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~-------------~-----~~gia~s~dg~~ly~~~~-----------~~~-~l~~~~ 223 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHL-------------G-----VNGIVLDAENEWLYLSPM-----------HST-SMYRIK 223 (343)
T ss_dssp CEETTEECBEECTTSCEECCCC-------------C-----EEEEEECTTSCEEEEEES-----------SCS-EEEEEE
T ss_pred eeECCEEEEeccCCCceeceec-------------c-----cceeEeccCCCEEEEEeC-----------CCC-eEEEEE
Confidence 788999888888 988877741 1 789999999999988765 232 566654
Q ss_pred CCeEE----------E--EecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEe
Q 011452 407 TGKCL----------A--KIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTG 474 (485)
Q Consensus 407 TGk~l----------~--tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSg 474 (485)
+.... . +..++. .....+++++||+.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~--------------------------------------g~pdgia~d~~G~l~va~ 265 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEK--------------------------------------PICDGISIDKDHNIYVGD 265 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEEC--------------------------------------CSCSCEEECTTCCEEEEE
T ss_pred HHHhcCCCCChhhhhcceEecccC--------------------------------------CCCceEEECCCCCEEEEc
Confidence 31100 0 000111 134568999999999999
Q ss_pred cCCCcEEEcc
Q 011452 475 NRHGLVHVWS 484 (485)
Q Consensus 475 s~DgtVklWd 484 (485)
..++.|.+||
T Consensus 266 ~~~~~V~~~d 275 (343)
T 2qe8_A 266 LAHSAIGVIT 275 (343)
T ss_dssp GGGTEEEEEE
T ss_pred cCCCeEEEEE
Confidence 9999999997
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=5.6e-13 Score=138.54 Aligned_cols=291 Identities=10% Similarity=0.070 Sum_probs=188.1
Q ss_pred ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEee----
Q 011452 137 EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA---- 212 (485)
Q Consensus 137 ~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s---- 212 (485)
+..-.+...|+++.+-.+... .. ++ ..++.+-|..+++... .+..+ ..|. ++|+ |||++|..++
T Consensus 33 ~~~~~~~~~pd~~~vyV~~~~-~~---~~-~~~V~ViD~~t~~v~~---~I~vG--~~P~-va~s-pDG~~lyVan~~~~ 100 (386)
T 3sjl_D 33 EPRILEAPAPDARRVYVNDPA-HF---AA-VTQQFVIDGEAGRVIG---MIDGG--FLPN-PVVA-DDGSFIAHASTVFS 100 (386)
T ss_dssp CCCBCCCCCCCTTEEEEEECG-GG---CS-SEEEEEEETTTTEEEE---EEEEC--SSCE-EEEC-TTSSCEEEEEEEEE
T ss_pred ccceeeccCCCCCEEEEEcCc-cc---CC-CCEEEEEECCCCeEEE---EEECC--CCCc-EEEC-CCCCEEEEEccccc
Confidence 333345668999987765431 00 00 1478888888877632 22222 2354 9998 7999775543
Q ss_pred ------CCCcEEEeecCCCeEEEEEc-C--------CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCC
Q 011452 213 ------QDSIYKVFDLKNYTMLYSIS-D--------KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL 277 (485)
Q Consensus 213 ------~D~tiKlWdl~~g~~l~tl~-~--------~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~ 277 (485)
.+++|.+||.++++.+.++. + ..-..++|||+++.|..+....+.+|.++|+++++.++++.-
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v-- 178 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV-- 178 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC--
Confidence 36899999999999988874 1 134569999866654443322347999999999999999963
Q ss_pred cceeEEEEEecCCCEEEEEeCCCcEEEEECCC-CeeEEecccCCC----ce-EEEEE-cCCCcEEEEEeCCcEEEEeCCC
Q 011452 278 HRNKKVDFIEQFNEKLLVKQENENLQILDVRN-FELTEVSRTEFM----TP-SAFIF-LYENQLFLTFRNRTVAVWNFRG 350 (485)
Q Consensus 278 ~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~t-g~~~~~l~gh~~----~v-~avaF-spdg~llaS~sD~TIklWd~~G 350 (485)
... ...+ +.....+++.+.|+++-+.++.+ ++...+...+++ .+ ...+| .++|+++..+.+++|.+-|+.+
T Consensus 179 ~g~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~ 256 (386)
T 3sjl_D 179 PDC-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS 256 (386)
T ss_dssp CSE-EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTT
T ss_pred CCc-ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCC
Confidence 111 1222 33445666778899999999986 665332222221 11 11355 4899876644489999999975
Q ss_pred cE---EEEee---c---CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCC
Q 011452 351 EL---VTSFE---D---HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLP 421 (485)
Q Consensus 351 ~l---l~tl~---g---H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~ 421 (485)
+. +..++ . -..|.|.. ...++++|+++.|.-.-.+..++ --....++|-+-|+.|+|.+++|.--.
T Consensus 257 ~~~~v~~~~~~~~~~~~~~g~~p~g-~q~~a~~~~~~~lyV~~~~~~~~-~hk~~~~~V~viD~~t~kv~~~i~vg~--- 331 (386)
T 3sjl_D 257 GDAKFLPAVEALTEAERADGWRPGG-WQQVAYHRALDRIYLLVDQRDEW-RHKTASRFVVVLDAKTGERLAKFEMGH--- 331 (386)
T ss_dssp SSCEECCCEESSCHHHHHTTEEECS-SSCEEEETTTTEEEEEEEECCTT-CTTSCEEEEEEEETTTCCEEEEEEEEE---
T ss_pred CcceeecceeccccccccccccCCC-cceeeECCCCCeEEEEecccccc-ccCCCCCEEEEEECCCCeEEEEEECCC---
Confidence 43 22222 0 01233333 34688999999988865311000 000113579999999999999986422
Q ss_pred CCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCC-EEEEecC-CCcEEEcc
Q 011452 422 AENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRN-EIYTGNR-HGLVHVWS 484 (485)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~-~LaSgs~-DgtVklWd 484 (485)
.+++|+|||||+ +||+.+. +++|.+.|
T Consensus 332 ------------------------------------~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 332 ------------------------------------EIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp ------------------------------------EECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred ------------------------------------CcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 678999999997 7888765 89999887
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=6.7e-12 Score=129.48 Aligned_cols=233 Identities=9% Similarity=0.045 Sum_probs=162.4
Q ss_pred cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCC--
Q 011452 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS-- 215 (485)
Q Consensus 138 ~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~-- 215 (485)
....|+++|+|+.+++-. .+ +.++.+++..|++. .+... ...+. ++|+ ++|+.|..+..++
T Consensus 132 ~P~~la~d~~g~lyv~d~----~~------~~I~~id~~~g~~~---~~~~~--~~~~~-ia~~-~~g~~l~~~d~~~~~ 194 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQR----DD------PRVRLISVDDNKVT---TVHPG--FKGGK-PAVT-KDKQRVYSIGWEGTH 194 (409)
T ss_dssp CEEEEEECSTTEEEEEET----TT------TEEEEEETTTTEEE---EEEET--CCBCB-CEEC-TTSSEEEEEBSSTTC
T ss_pred CceEEEEeCCCCEEEEec----CC------CcEEEEECCCCEEE---Eeecc--CCCCc-eeEe-cCCCcEEEEecCCCc
Confidence 578999999999665522 33 58889997667652 22222 23445 9997 7898887777665
Q ss_pred cEEEeecCCCeEEEEE------cCCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEE----eecCCcce-e-E
Q 011452 216 IYKVFDLKNYTMLYSI------SDKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKS----FNHLLHRN-K-K 282 (485)
Q Consensus 216 tiKlWdl~~g~~l~tl------~~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~t----l~~~~~~~-~-~ 282 (485)
.|.+||..++.....+ ....+++++|+| ++.|.++ +.++.|..||.++++.... ..++.... . .
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~---d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV---DSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE---CTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCE
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE---ECCCcEEEEECCCCCEEEEecccccCCCCCCcccc
Confidence 7888888766554455 345788999999 7887774 3357999999988874332 22333333 3 8
Q ss_pred EEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEecccC---------------CCceEEEEEcCCCcEEEEEe--CCcEE
Q 011452 283 VDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRTE---------------FMTPSAFIFLYENQLFLTFR--NRTVA 344 (485)
Q Consensus 283 V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh---------------~~~v~avaFspdg~llaS~s--D~TIk 344 (485)
++|. |+++.|.++ ..++.|+.||.... +.++.++ ...+..++|+|+|+++++-+ ++.|+
T Consensus 272 ia~~-p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 272 LIYY-FVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp EEEE-TTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred EEEe-CCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 9997 555677666 58899999998743 3333343 36799999999999988875 78999
Q ss_pred EEeCC-CcEEEEeecCCCC---C-------CCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeC
Q 011452 345 VWNFR-GELVTSFEDHLLW---H-------PDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNI 405 (485)
Q Consensus 345 lWd~~-G~ll~tl~gH~~~---~-------~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl 405 (485)
.||.. |+ +.++.++... . ......+|+++|||.++++-.. .+.|+..++
T Consensus 349 ~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~-----------n~~Ir~i~~ 408 (409)
T 3hrp_A 349 KLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW-----------GKAIRKYAV 408 (409)
T ss_dssp EEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST-----------TCEEEEEEE
T ss_pred EEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC-----------CCeEEEEEe
Confidence 99964 65 5677776110 0 0012689999999998888654 578877654
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.52 E-value=4.5e-13 Score=146.38 Aligned_cols=233 Identities=11% Similarity=0.103 Sum_probs=156.1
Q ss_pred CceEEEEeCCCCeEEEEe-----eCCCcEEEeecCCCeEEEE-EcCCcEEEEEEcCCceEEEEEcCCC-----------C
Q 011452 194 WPGFVEFDDVNGKVLTYS-----AQDSIYKVFDLKNYTMLYS-ISDKNVQEIKISPGIMLLIFTKASG-----------H 256 (485)
Q Consensus 194 ~~~~V~Fs~pnG~~Las~-----s~D~tiKlWdl~~g~~l~t-l~~~~V~~VafSpg~~ll~sss~~~-----------D 256 (485)
.+..++|| |||+.||++ +.+.+|+|||+++|+.+.. +.......++|| |+..+.+.+.+. .
T Consensus 130 ~l~~~~~S-pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 130 ALDQLSFS-RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEEEC-TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEEC-CCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 34578898 899999964 3447899999999996543 322223578899 555444444331 1
Q ss_pred eeEEEEecCCCe----EEEEeec-CCcceeEEEEEecCCCEEEEEe----CCCcEEEEECCCCe-eEEecccCCCceEEE
Q 011452 257 VPLKILSIEDGT----VLKSFNH-LLHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNFE-LTEVSRTEFMTPSAF 326 (485)
Q Consensus 257 ~tIklWdi~tG~----~L~tl~~-~~~~~~~V~f~~~~~~~lls~s----~D~tIkIWDv~tg~-~~~~l~gh~~~v~av 326 (485)
..|++|++.+++ ++..... |......+.|+ ||+.+|+... .+..|.+||+.+++ ....+..+.......
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~ 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT-EDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC-TTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEc-CCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE
Confidence 459999998875 3444443 43445688885 7888887753 33589999998874 445555677777666
Q ss_pred EEcCCCcEEEEEe-C---CcEEEEeCC-CcE--EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCC-
Q 011452 327 IFLYENQLFLTFR-N---RTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAG- 398 (485)
Q Consensus 327 aFspdg~llaS~s-D---~TIklWd~~-G~l--l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dg- 398 (485)
..++++++++... | ..|.+||++ ++. .++|..|... +. .|+|+|+.|+....+ ++
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-----~~--~~s~~g~~lv~~~~~----------~g~ 349 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-----VL--TVHSGSGYLFAEYMV----------DAT 349 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-----CE--EEEEETTEEEEEEEE----------TTE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-----EE--EEEEECCEEEEEEEE----------CCe
Confidence 4455556666665 4 578899996 554 4677777654 44 899999999887762 33
Q ss_pred -eEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCC
Q 011452 399 -SINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRH 477 (485)
Q Consensus 399 -tIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~D 477 (485)
.|++||+. |+.+..+.-... ..|..+.++||++.|+-...+
T Consensus 350 ~~l~~~d~~-g~~~~~l~~p~~-------------------------------------~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 350 ARVEQFDYE-GKRVREVALPGL-------------------------------------GSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp EEEEEECTT-SCEEEEECCSSS-------------------------------------SEEEECCCCTTCSCEEEEEEC
T ss_pred eEEEEEECC-CCeeEEeecCCC-------------------------------------ceEEeeecCCCCCEEEEEecC
Confidence 79999987 555555543210 156678888898877665544
Q ss_pred ----CcEEEcc
Q 011452 478 ----GLVHVWS 484 (485)
Q Consensus 478 ----gtVklWd 484 (485)
++|.+||
T Consensus 392 ~~tP~~l~~~d 402 (693)
T 3iuj_A 392 YAQPPTLYRFE 402 (693)
T ss_dssp SSSCCEEEEEC
T ss_pred CCCCCEEEEEE
Confidence 6777776
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.52 E-value=2.7e-12 Score=141.44 Aligned_cols=280 Identities=12% Similarity=0.086 Sum_probs=183.7
Q ss_pred ecCEEEEEeCCCeEEeeecccCcEEEEeecCCcc----------cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEe
Q 011452 104 ARDIVFALAQSGVCAAFCRETNQRICFLNVTADE----------VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (485)
Q Consensus 104 s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~----------~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw 173 (485)
.+++|+.++.++.+..+|.+||+.+=........ .-+++++ ++..|+.++ .| ..+..+
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~----~d------g~l~Al 136 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGV----LD------GRLEAI 136 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC----TT------SEEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEc----cC------CEEEEE
Confidence 4888999999999999999999988766432110 1123333 355666644 23 467778
Q ss_pred EeccCCcCcccceeeeccc---cCceEEEEeC--CCCeEEEEee-----CCCcEEEeecCCCeEEEEEcC---C------
Q 011452 174 YIRRGKPDAGFALFESESL---KWPGFVEFDD--VNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISD---K------ 234 (485)
Q Consensus 174 ~i~~G~~~~~~~lf~~~~~---~~~~~V~Fs~--pnG~~Las~s-----~D~tiKlWdl~~g~~l~tl~~---~------ 234 (485)
|..+|++ +|+.... .....+..++ .+|++++..+ .|+.|..||+++|+++.++.. .
T Consensus 137 Da~TG~~-----~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~ 211 (689)
T 1yiq_A 137 DAKTGQR-----AWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPE 211 (689)
T ss_dssp ETTTCCE-----EEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCC
T ss_pred ECCCCCE-----eeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccc
Confidence 8889987 5554221 0111111110 1677777554 379999999999999876631 0
Q ss_pred -----------------------cE-EEEEEcC-CceEEEEEcCCC-------------C----eeEEEEecCCCeEEEE
Q 011452 235 -----------------------NV-QEIKISP-GIMLLIFTKASG-------------H----VPLKILSIEDGTVLKS 272 (485)
Q Consensus 235 -----------------------~V-~~VafSp-g~~ll~sss~~~-------------D----~tIklWdi~tG~~L~t 272 (485)
.+ ..++++| ++++.+. ..+. | ..|.-||.+||+.+..
T Consensus 212 ~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~-~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~ 290 (689)
T 1yiq_A 212 GKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIG-VGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWH 290 (689)
T ss_dssp SHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEE
T ss_pred cccccccccccCCceeeecCCCCccccceeEcCCCCEEEEe-CCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEe
Confidence 11 2578887 4444443 3221 0 1499999999999998
Q ss_pred eecCCccee------EEEEE--ecCCC---EEEEEeCCCcEEEEECCCCeeEEeccc-CCCc------------------
Q 011452 273 FNHLLHRNK------KVDFI--EQFNE---KLLVKQENENLQILDVRNFELTEVSRT-EFMT------------------ 322 (485)
Q Consensus 273 l~~~~~~~~------~V~f~--~~~~~---~lls~s~D~tIkIWDv~tg~~~~~l~g-h~~~------------------ 322 (485)
+....+..+ .+.+. ..++. .++.++.|+.+.++|.+||+++....- +..+
T Consensus 291 ~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~ 370 (689)
T 1yiq_A 291 YQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENA 370 (689)
T ss_dssp EESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHH
T ss_pred eecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhc
Confidence 874212111 11111 12232 466678999999999999998732110 0000
Q ss_pred --------------------eEEEEEcCCCcEEEEEe-------------------------------------------
Q 011452 323 --------------------PSAFIFLYENQLFLTFR------------------------------------------- 339 (485)
Q Consensus 323 --------------------v~avaFspdg~llaS~s------------------------------------------- 339 (485)
-..++|+|+.++|....
T Consensus 371 ~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~ 450 (689)
T 1yiq_A 371 AYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMA 450 (689)
T ss_dssp CTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHH
T ss_pred cccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCC
Confidence 01267899988877652
Q ss_pred ---CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEec
Q 011452 340 ---NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIR 415 (485)
Q Consensus 340 ---D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~ 415 (485)
+++|..||+. |+.+-++..+..+ +.-.++..|.+++.++. ||.|+.||..||+.|.+++
T Consensus 451 ~~~~g~l~A~D~~tG~~~W~~~~~~~~------~~g~~~tagglvf~gt~-----------dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 451 KSWSGKLIAWDPVKQQAAWEVPYVTIF------NGGTLSTAGNLVFEGSA-----------DGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp TTCEEEEEEEETTTTEEEEEEEESSSC------CCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEE
T ss_pred CCcceeEEEEECCCCCeEeEccCCCCc------cCccceECCCEEEEECC-----------CCcEEEEECCCCccceeee
Confidence 2779999995 9999988877543 33466778889999886 7999999999999999997
Q ss_pred CCC
Q 011452 416 ASN 418 (485)
Q Consensus 416 gH~ 418 (485)
...
T Consensus 514 ~~~ 516 (689)
T 1yiq_A 514 AAS 516 (689)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.52 E-value=5.2e-12 Score=123.01 Aligned_cols=226 Identities=8% Similarity=0.066 Sum_probs=157.0
Q ss_pred ccCceEEEEeCCCCe-EEEEeeCCCcEEEeecCCCe-EEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeE
Q 011452 192 LKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYT-MLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTV 269 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~-~Las~s~D~tiKlWdl~~g~-~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~ 269 (485)
..|+....|+ ++|+ ++.++..++.|..|+. +++ ..+......+..++++|++.++++... +..|.+|+.+ |+.
T Consensus 44 ~~~~egp~~~-~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~--~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 44 ATWSEGPAWW-EAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHG--RRAITRSDAD-GQA 118 (305)
T ss_dssp CSSEEEEEEE-GGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETT--TTEEEEECTT-SCE
T ss_pred CcCccCCeEe-CCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECC--CCEEEEECCC-CCE
Confidence 4567788998 6887 7778888999999998 454 334445678999999998888776443 3689999985 774
Q ss_pred EEEeecC----CcceeEEEEEecCCCEEEE----EeC-------------CCcEEEEECCCCeeEEecccCCCceEEEEE
Q 011452 270 LKSFNHL----LHRNKKVDFIEQFNEKLLV----KQE-------------NENLQILDVRNFELTEVSRTEFMTPSAFIF 328 (485)
Q Consensus 270 L~tl~~~----~~~~~~V~f~~~~~~~lls----~s~-------------D~tIkIWDv~tg~~~~~l~gh~~~v~avaF 328 (485)
..-.... ......+++. +++..+++ +.. .+.|..+|..+++..... +...++.++|
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d-~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVA-RDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF 195 (305)
T ss_dssp EEEECEETTEECSCCCCEEEC-TTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred EEEEeccCCCccCCCCCEEEC-CCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence 3322111 1224468875 55554443 221 256788888888776554 5567899999
Q ss_pred cCCCcEEEEEe-C------CcEEEEeCCCcEEE---EeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCC
Q 011452 329 LYENQLFLTFR-N------RTVAVWNFRGELVT---SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAG 398 (485)
Q Consensus 329 spdg~llaS~s-D------~TIklWd~~G~ll~---tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dg 398 (485)
+|||+.|..+. + +.|.+|++.+.-+. .+..-.. ....++++.+||.+.++. . +
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~----~~pdgi~~d~~G~lwv~~-~------------~ 258 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD----GLPDGFCVDRGGWLWSSS-G------------T 258 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS----SCCCSEEECTTSCEEECC-S------------S
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC----CCCCeEEECCCCCEEEec-C------------C
Confidence 99999665554 5 78999998632122 2211111 114579999999977764 2 3
Q ss_pred eEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCC
Q 011452 399 SINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHG 478 (485)
Q Consensus 399 tIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~Dg 478 (485)
.|.+||. +|+.+.++..+. .+.+++|+||++.|+.++.++
T Consensus 259 gv~~~~~-~g~~~~~~~~~~---------------------------------------~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 259 GVCVFDS-DGQLLGHIPTPG---------------------------------------TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEEECT-TSCEEEEEECSS---------------------------------------CCCEEEECTTSCEEEEEETTE
T ss_pred cEEEECC-CCCEEEEEECCC---------------------------------------ceeEEEEeCCCCEEEEEcCCe
Confidence 4999997 699998887543 567899999999999988888
Q ss_pred cEEE
Q 011452 479 LVHV 482 (485)
Q Consensus 479 tVkl 482 (485)
..++
T Consensus 299 l~~~ 302 (305)
T 3dr2_A 299 LWML 302 (305)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=2e-11 Score=118.72 Aligned_cols=226 Identities=12% Similarity=0.052 Sum_probs=158.5
Q ss_pred CcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC
Q 011452 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD 214 (485)
Q Consensus 135 ~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D 214 (485)
....-.+..|+|+++.|..+. ... +.+..|+...|+. ..+.. -..+..++|+ ++|+++++. +
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d--~~~-------~~i~~~d~~~~~~----~~~~~--~~~~~~i~~~-~dG~l~v~~--~ 72 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVD--IPA-------KKVCRWDSFTKQV----QRVTM--DAPVSSVALR-QSGGYVATI--G 72 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEE--TTT-------TEEEEEETTTCCE----EEEEC--SSCEEEEEEB-TTSSEEEEE--T
T ss_pred CCccccCCeEECCCCEEEEEE--CCC-------CEEEEEECCCCcE----EEEeC--CCceEEEEEC-CCCCEEEEE--C
Confidence 445677899999877766543 222 4788888766654 23332 2467789998 799977654 6
Q ss_pred CcEEEeecCCCeEEEEE--c----CCcEEEEEEcCCceEEEEEcCCC-------CeeEEEEecC-CCeEEEEeecCCcce
Q 011452 215 SIYKVFDLKNYTMLYSI--S----DKNVQEIKISPGIMLLIFTKASG-------HVPLKILSIE-DGTVLKSFNHLLHRN 280 (485)
Q Consensus 215 ~tiKlWdl~~g~~l~tl--~----~~~V~~VafSpg~~ll~sss~~~-------D~tIklWdi~-tG~~L~tl~~~~~~~ 280 (485)
..|.+||+++++..... . ...+++++++|++.+.++..... ...-+||.+. +|+...... +....
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-~~~~p 151 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD-QVDIS 151 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-EESBE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-ccccc
Confidence 78999999988754322 1 13589999999777766543211 1234566554 455544333 33455
Q ss_pred eEEEEEecCCCEEEEE-eCCCcEEEEEC--CCCee-----EEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-C
Q 011452 281 KKVDFIEQFNEKLLVK-QENENLQILDV--RNFEL-----TEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-G 350 (485)
Q Consensus 281 ~~V~f~~~~~~~lls~-s~D~tIkIWDv--~tg~~-----~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G 350 (485)
..++|+ |++..|.+. +.++.|.+||+ .+|++ ...+..+...+..+++.++|++.++.. ++.|..||.+ |
T Consensus 152 ngi~~s-pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 152 NGLDWS-LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEEEEC-TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred cceEEc-CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 689986 677777665 57899999997 56654 222334456789999999999999988 8899999996 9
Q ss_pred cEEEEeecCCCCCCCCCeeEEEEC-CCCCEEEEEec
Q 011452 351 ELVTSFEDHLLWHPDCNTNNIYIT-SDQDLIISYCK 385 (485)
Q Consensus 351 ~ll~tl~gH~~~~~~~~v~svafS-pDG~~LaS~s~ 385 (485)
+++.++..+... +.+++|+ ||++.|...+.
T Consensus 231 ~~~~~i~~p~~~-----~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 KRLQTVKLPVDK-----TTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEECSSSB-----EEEEEEESGGGCEEEEEEB
T ss_pred eEEEEEECCCCC-----ceEEEEeCCCCCEEEEEcC
Confidence 999999877544 8999998 99987766654
No 218
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.47 E-value=3e-11 Score=132.86 Aligned_cols=278 Identities=13% Similarity=0.082 Sum_probs=185.1
Q ss_pred ecCEEEEEeCCCeEEeeecccCcEEEEeecCCc----------ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEe
Q 011452 104 ARDIVFALAQSGVCAAFCRETNQRICFLNVTAD----------EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (485)
Q Consensus 104 s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~----------~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw 173 (485)
.+++|+.++.++.+..+|.+||+.+=....... ..-+++++ ++..|+.++. + ..+..+
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~----d------g~l~al 143 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAW----D------GRLIAL 143 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECT----T------SEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcC----C------CEEEEE
Confidence 488899999999999999999998866544211 11244555 4556666442 3 367778
Q ss_pred EeccCCcCcccceeeeccc-c-----Cce-EEEEeCCCCeEEEEee-----CCCcEEEeecCCCeEEEEEcC-C-c----
Q 011452 174 YIRRGKPDAGFALFESESL-K-----WPG-FVEFDDVNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISD-K-N---- 235 (485)
Q Consensus 174 ~i~~G~~~~~~~lf~~~~~-~-----~~~-~V~Fs~pnG~~Las~s-----~D~tiKlWdl~~g~~l~tl~~-~-~---- 235 (485)
|..+|++ +|+.... . .+. ..... ++++++.++ .|+.|..+|+++|+++.++.. . .
T Consensus 144 D~~tG~~-----~W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~ 216 (677)
T 1kb0_A 144 DAATGKE-----VWHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKP 216 (677)
T ss_dssp ETTTCCE-----EEEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSC
T ss_pred ECCCCCE-----EeeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccc
Confidence 8888987 4554211 0 011 11222 577766554 279999999999999877642 0 0
Q ss_pred ---------------------------E-EEEEEcC-CceEEEEEcCCC-------------C----eeEEEEecCCCeE
Q 011452 236 ---------------------------V-QEIKISP-GIMLLIFTKASG-------------H----VPLKILSIEDGTV 269 (485)
Q Consensus 236 ---------------------------V-~~VafSp-g~~ll~sss~~~-------------D----~tIklWdi~tG~~ 269 (485)
+ ..++++| ++++.+. ..+. | .+|..+|.+||+.
T Consensus 217 ~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~-~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~ 295 (677)
T 1kb0_A 217 FEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVG-TGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKY 295 (677)
T ss_dssp CSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE
T ss_pred ccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEE-CCCCccccCCCCCccCCCCeeeEEEEEEECCCCCE
Confidence 1 2478887 4554443 3221 1 2599999999999
Q ss_pred EEEeecCCcc------eeEEEEE--ecCC---CEEEEEeCCCcEEEEECCCCeeEEecccCC-Cce--------------
Q 011452 270 LKSFNHLLHR------NKKVDFI--EQFN---EKLLVKQENENLQILDVRNFELTEVSRTEF-MTP-------------- 323 (485)
Q Consensus 270 L~tl~~~~~~------~~~V~f~--~~~~---~~lls~s~D~tIkIWDv~tg~~~~~l~gh~-~~v-------------- 323 (485)
+..+....+. .....+. ..++ ..+++++.++.|.++|.+||+++....-.. .+.
T Consensus 296 ~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~ 375 (677)
T 1kb0_A 296 KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAA 375 (677)
T ss_dssp EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGG
T ss_pred EEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccc
Confidence 9988742221 1111111 1244 356667899999999999999876543110 000
Q ss_pred --------------------EEEEEcCCCcEEEEEe-C------------------------------------------
Q 011452 324 --------------------SAFIFLYENQLFLTFR-N------------------------------------------ 340 (485)
Q Consensus 324 --------------------~avaFspdg~llaS~s-D------------------------------------------ 340 (485)
..++|+|++.++.... +
T Consensus 376 ~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 455 (677)
T 1kb0_A 376 ARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKP 455 (677)
T ss_dssp GGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCC
T ss_pred cCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCC
Confidence 1468899988887653 3
Q ss_pred -CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 341 -RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 341 -~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
++|..||+. |+.+-++.... . +++..++++|.+++.++. ||++++||+.||+++.++.-..
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~-~-----~~~g~~~~~g~~v~~g~~-----------dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVS-P-----WNGGTLTTAGNVVFQGTA-----------DGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-S-----CCCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECSS
T ss_pred ccEEEEEeCCCCcEEeecCCCC-C-----CcCcceEeCCCEEEEECC-----------CCcEEEEECCCCceeeeeeCCC
Confidence 789999995 99988886433 2 455667888889998876 7999999999999999997544
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=1.5e-10 Score=114.57 Aligned_cols=223 Identities=11% Similarity=-0.001 Sum_probs=153.5
Q ss_pred cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcE
Q 011452 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIY 217 (485)
Q Consensus 138 ~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~ti 217 (485)
...+.+|+|+++.|..+.. .+ ..+..|+...|+. ..+.. -..+.+++|+ ++|++++.. .+ -|
T Consensus 50 ~~egp~~~~~~~~l~~~d~---~~------~~i~~~d~~~~~~----~~~~~--~~~v~~i~~~-~dg~l~v~~-~~-gl 111 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNI---LE------RELHELHLASGRK----TVHAL--PFMGSALAKI-SDSKQLIAS-DD-GL 111 (326)
T ss_dssp BEEEEEEETTTTEEEEEEG---GG------TEEEEEETTTTEE----EEEEC--SSCEEEEEEE-ETTEEEEEE-TT-EE
T ss_pred CCcCCeEeCCCCEEEEEEC---CC------CEEEEEECCCCcE----EEEEC--CCcceEEEEe-CCCeEEEEE-CC-CE
Confidence 4567889999777766442 12 4788888766654 22332 2356789998 799988865 34 48
Q ss_pred EEeecCCCeEEEEEc------CCcEEEEEEcCCceEEEEEcCC--CCeeEEEEecCCCeEEEEeecCCcceeEEEEEecC
Q 011452 218 KVFDLKNYTMLYSIS------DKNVQEIKISPGIMLLIFTKAS--GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQF 289 (485)
Q Consensus 218 KlWdl~~g~~l~tl~------~~~V~~VafSpg~~ll~sss~~--~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~ 289 (485)
.+||+++++...... ...+++++++|++.+.++.... .....+||.+.+|+...... +......++|+ ++
T Consensus 112 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~i~~s-~d 189 (326)
T 2ghs_A 112 FLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFS-PD 189 (326)
T ss_dssp EEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEEC-TT
T ss_pred EEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeC-CCcccCCeEEc-CC
Confidence 999999888543222 1358999999977777664321 01234455444676543322 22345688886 67
Q ss_pred CCEEEEE-eCCCcEEEEECC--CC-ee-----EEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCCCcEEEEeecC
Q 011452 290 NEKLLVK-QENENLQILDVR--NF-EL-----TEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDH 359 (485)
Q Consensus 290 ~~~lls~-s~D~tIkIWDv~--tg-~~-----~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~G~ll~tl~gH 359 (485)
+..|.++ +.++.|.+||+. +| ++ ...+.++...+..+++.++|.++++.. ++.|.+||.+|+++.++..+
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVP 269 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECS
T ss_pred CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECC
Confidence 7777665 578999999986 67 32 333444556788999999999998887 78999999999999888876
Q ss_pred CCCCCCCCeeEEEEC-CCCCEEEEEec
Q 011452 360 LLWHPDCNTNNIYIT-SDQDLIISYCK 385 (485)
Q Consensus 360 ~~~~~~~~v~svafS-pDG~~LaS~s~ 385 (485)
... +.+++|+ ||++.|..++.
T Consensus 270 ~~~-----~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 270 GKQ-----TTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CSB-----EEEEEEESTTSCEEEEEEB
T ss_pred CCC-----cEEEEEecCCCCEEEEEec
Confidence 544 8999998 99987755553
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.45 E-value=2.5e-14 Score=145.20 Aligned_cols=187 Identities=11% Similarity=0.045 Sum_probs=109.3
Q ss_pred CCeEEEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcc-ee-
Q 011452 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHR-NK- 281 (485)
Q Consensus 204 nG~~Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~-~~- 281 (485)
++.+|..++.|++|..||+++|+++.++....+.+..+.+++.+++.+ +.|+.|..||.++|+.+..++.+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~--s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPD--PNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEEC--TTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEe--CCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 456777788999999999999999888765555555556566444443 35589999999999998887643221 11
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecC
Q 011452 282 KVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDH 359 (485)
Q Consensus 282 ~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH 359 (485)
...+ ..++.+++++.|++|..||.++|+++..+..+. .+.++|++.+++.++ |++|..||.+ |+++.+++.+
T Consensus 86 sp~~--~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 86 SPCR--SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CceE--ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 1111 136678888899999999999999988776553 245678888888888 9999999995 9987776543
Q ss_pred CCCCCCCCeeEEEECCCC---CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 360 LLWHPDCNTNNIYITSDQ---DLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 360 ~~~~~~~~v~svafSpDG---~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
. ....++++++ ..++.++. ||.|..||..||+++.++.-
T Consensus 160 ~-------~~~~~~~~~~~~~~~v~~~~~-----------dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 160 D-------YAASLPEDDVDYKMSHFVSNG-----------DGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp E-------ECCBCCCCCTTCCCCEEEEET-----------SCEEEEECTTTCCEEEEEEC
T ss_pred c-------ccCccccCCccccceEEEECC-----------CCEEEEEECCCCcEEEEecC
Confidence 2 1233445542 34555554 79999999999999988764
No 221
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.43 E-value=1.9e-11 Score=117.60 Aligned_cols=288 Identities=9% Similarity=0.021 Sum_probs=199.1
Q ss_pred cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCccc
Q 011452 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~ 184 (485)
+..|..++.++.+..|| .+|+.+-.... +...+.+++..++|..++. .. . +..++ ++|+.
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~g~l~v~------t~------~-l~~~d-~~g~~---- 89 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKS-GEIIECRPSIGKDGTIYFG------SD------K-VYAIN-PDGTE---- 89 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCEEESSCG-GGEEEECCEETTTTEECCS------SC------E-EEEEC-CCGGG----
T ss_pred CCeEEEEcCCCEEEEEC-CCCcEEEEEec-CCCcccceEEecCCcEEEe------cC------c-EEEEC-CCCcE----
Confidence 66788888999999999 88998766554 5556789999888875542 12 2 44455 36654
Q ss_pred ceeeecc-ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEcCCCCeeEEE
Q 011452 185 ALFESES-LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKI 261 (485)
Q Consensus 185 ~lf~~~~-~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss~~~D~tIkl 261 (485)
++.... ........+. +|.+.+ ++.++.+..+|.+ |+.+.... ...+.++.+.+++.+.++. .++.|..
T Consensus 90 -~~~~~~~~~~~~~~~~~--~~~l~v-~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt---~~~~l~~ 161 (330)
T 3hxj_A 90 -KWRFDTKKAIVSDFTIF--EDILYV-TSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGS---NDNYLYA 161 (330)
T ss_dssp -GGGSCC-----CCEEEE--TTEEEE-ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEEC---TTSEEEE
T ss_pred -EEEEECCCCcccCceEE--CCEEEE-EecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEc---CCCEEEE
Confidence 222110 0111133443 566554 5678899999988 88776654 3456677788777776653 3378999
Q ss_pred EecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEeCC
Q 011452 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFRNR 341 (485)
Q Consensus 262 Wdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~sD~ 341 (485)
+|.+ |+.+..+......+..+.+. .++.+.+++ +.|..+| .+++.+.....+...+.++++.++|.+.+...++
T Consensus 162 ~d~~-g~~~~~~~~~~~~~~~~~~d--~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~ 235 (330)
T 3hxj_A 162 INPD-GTEKWRFKTNDAITSAASIG--KDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDG 235 (330)
T ss_dssp ECTT-SCEEEEEECSSCCCSCCEEC--TTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTT
T ss_pred ECCC-CCEeEEEecCCCceeeeEEc--CCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCC
Confidence 9998 99988887544445555542 255677766 8999999 7787766665555678888999999988876677
Q ss_pred cEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCC
Q 011452 342 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLP 421 (485)
Q Consensus 342 TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~ 421 (485)
.|..+|.+|+.+..+...... +.++++.++|.+.+.. . +|.|..+|. +|+.+..+.-..
T Consensus 236 gl~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~g~l~v~t-~-----------~ggl~~~d~-~g~~~~~~~~~~--- 294 (330)
T 3hxj_A 236 HLYAINPDGTEKWRFKTGKRI-----ESSPVIGNTDTIYFGS-Y-----------DGHLYAINP-DGTEKWNFETGS--- 294 (330)
T ss_dssp EEEEECTTSCEEEEEECSSCC-----CSCCEECTTSCEEEEC-T-----------TCEEEEECT-TSCEEEEEECSS---
T ss_pred eEEEECCCCCEeEEeeCCCCc-----cccceEcCCCeEEEec-C-----------CCCEEEECC-CCcEEEEEEcCC---
Confidence 888888889888877654433 4567778888877653 2 578999995 798887765432
Q ss_pred CCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEc
Q 011452 422 AENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVW 483 (485)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklW 483 (485)
..+.+++++++|+. +-|+.+|.+++-
T Consensus 295 -----------------------------------~~~~~~~~d~~g~l-~~gt~~G~~~~~ 320 (330)
T 3hxj_A 295 -----------------------------------WIIATPVIDENGTI-YFGTRNGKFYAL 320 (330)
T ss_dssp -----------------------------------CCCSCCEECTTCCE-EEECTTSCEEEE
T ss_pred -----------------------------------ccccceEEcCCCEE-EEEcCCCeEEEE
Confidence 15667888899875 558889998764
No 222
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.42 E-value=6.4e-10 Score=110.53 Aligned_cols=269 Identities=12% Similarity=0.101 Sum_probs=170.7
Q ss_pred EecCEEEEEeCCCeEEeeecccCcEEEEeecCC--------cccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeE
Q 011452 103 AARDIVFALAQSGVCAAFCRETNQRICFLNVTA--------DEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEY 174 (485)
Q Consensus 103 ~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~--------~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~ 174 (485)
+.++.|+.++.++.+..+|.++|+.+-...... ...+.+...- ++..|..++. + ..+..+|
T Consensus 51 v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~----~------g~l~a~d 119 (376)
T 3q7m_A 51 LADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSE----K------AQVYALN 119 (376)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEET----T------SEEEEEE
T ss_pred EECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcC----C------CEEEEEE
Confidence 347889999999999999999999886554421 2233332222 3445555442 2 3677788
Q ss_pred eccCCcCcccceeeeccccCc-eEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC-CcE------EEEEEcCCce
Q 011452 175 IRRGKPDAGFALFESESLKWP-GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KNV------QEIKISPGIM 246 (485)
Q Consensus 175 i~~G~~~~~~~lf~~~~~~~~-~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~-~~V------~~VafSpg~~ 246 (485)
..+|+. +|+...-..+ ...... +|.+ ..++.|+.+..+|.++|+.+..... ..+ ....+. ++.
T Consensus 120 ~~tG~~-----~W~~~~~~~~~~~p~~~--~~~v-~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~ 190 (376)
T 3q7m_A 120 TSDGTV-----AWQTKVAGEALSRPVVS--DGLV-LIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGA 190 (376)
T ss_dssp TTTCCE-----EEEEECSSCCCSCCEEE--TTEE-EEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTE
T ss_pred CCCCCE-----EEEEeCCCceEcCCEEE--CCEE-EEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCE
Confidence 888886 4554211111 122333 4554 4467799999999999998877653 222 222333 455
Q ss_pred EEEEEcCCCCeeEEEEecCCCeEEEEeecCCcc----------e-eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEe
Q 011452 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHR----------N-KKVDFIEQFNEKLLVKQENENLQILDVRNFELTEV 315 (485)
Q Consensus 247 ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~----------~-~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~ 315 (485)
+++. ..++.|..+|.++|+.+..+...... + .... ..++.+.+++.++.|..+|.++|+.+-.
T Consensus 191 v~~g---~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~v~~~~~~g~l~~~d~~tG~~~w~ 264 (376)
T 3q7m_A 191 AVVG---GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPV---VVNGVVFALAYNGNLTALDLRSGQIMWK 264 (376)
T ss_dssp EEEC---CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCE---EETTEEEEECTTSCEEEEETTTCCEEEE
T ss_pred EEEE---cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcE---EECCEEEEEecCcEEEEEECCCCcEEee
Confidence 5543 23478999999999999887632110 1 1111 1267888888999999999999998765
Q ss_pred cccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCc
Q 011452 316 SRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAE 394 (485)
Q Consensus 316 l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~ 394 (485)
... ......+. .++.+++...++.|..+|.+ |+.+...+..... .+.+..+ .+..|..++.
T Consensus 265 ~~~--~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~----~~~~~~~--~~~~l~v~~~--------- 326 (376)
T 3q7m_A 265 REL--GSVNDFIV-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR----LLTSPVL--YNGNLVVGDS--------- 326 (376)
T ss_dssp ECC--CCEEEEEE-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS----CCCCCEE--ETTEEEEECT---------
T ss_pred ccC--CCCCCceE-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC----cccCCEE--ECCEEEEEeC---------
Confidence 432 23334333 35555555449999999995 9988777622111 0222333 2456666664
Q ss_pred CCCCeEEEEeCCCCeEEEEecCC
Q 011452 395 GNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 395 ~~DgtIklWdl~TGk~l~tl~gH 417 (485)
+|.|..+|..||+.+..+...
T Consensus 327 --~g~l~~~d~~tG~~~~~~~~~ 347 (376)
T 3q7m_A 327 --EGYLHWINVEDGRFVAQQKVD 347 (376)
T ss_dssp --TSEEEEEETTTCCEEEEEECC
T ss_pred --CCeEEEEECCCCcEEEEEecC
Confidence 699999999999999888653
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.42 E-value=5.6e-11 Score=124.89 Aligned_cols=275 Identities=13% Similarity=0.036 Sum_probs=175.6
Q ss_pred CeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeee---cc
Q 011452 115 GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES---ES 191 (485)
Q Consensus 115 gtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~---~~ 191 (485)
+++.+.|..|++.+.++..+.. . .|+|||||+.|..+..+.+.....=...++.+.|..+++.....++=.. ..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 7999999999999999987543 5 8999999999887663210000000114888889888887432221000 01
Q ss_pred ccCceEEEEeCCCCeEEEEeeC--CCcEEEeecCCCeEEEEEcCCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCe
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSISDKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGT 268 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~--D~tiKlWdl~~g~~l~tl~~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~ 268 (485)
...|..++|+ |||++|..+.. +++|-|.|+++++.+.++.-... +.+.| +...+++.+ .|+++-+.++.+|+
T Consensus 176 g~~P~~~~~s-pDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~--~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 176 GTYQWMNALT-PDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNC--RDGSLARVDFADGE 250 (426)
T ss_dssp SCCGGGSEEC-TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEE--TTSSEEEEECCTTC
T ss_pred CCCcceEEEc-CCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEc--CCCCEEEEECCCCc
Confidence 2356689998 79988776653 68999999999999988863221 22222 112222211 12344444555555
Q ss_pred EEEEe----ecCCcce-eEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEE--ec---cc----C---CCceEEEEEcCC
Q 011452 269 VLKSF----NHLLHRN-KKVDFIEQFNEKLLVKQENENLQILDVRNFELTE--VS---RT----E---FMTPSAFIFLYE 331 (485)
Q Consensus 269 ~L~tl----~~~~~~~-~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~--~l---~g----h---~~~v~avaFspd 331 (485)
...+. .-....+ ..+.|. ++++.++.....++|-+.|+.++.... .. .. + ......++|+||
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~-~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d 329 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFS-LRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ 329 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEEC-TTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG
T ss_pred EEEEeeeeeccCCCceeeEeeec-CCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCC
Confidence 55321 1101111 134554 677888777788899999997654211 10 00 0 011123689999
Q ss_pred CcEEEEEe-----------CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCC-EEEEEecCCCCCCCCcCCCC
Q 011452 332 NQLFLTFR-----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNAG 398 (485)
Q Consensus 332 g~llaS~s-----------D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~-~LaS~s~d~~~d~~~~~~Dg 398 (485)
++++.... +++|.+.|.. ++.+.++.--.. .++|+|+|||+ +|++... .++
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~------P~gia~spDg~~~lyv~n~----------~s~ 393 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE------IDSINVSQDAEPLLYALSA----------GTQ 393 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE------ECEEEECCSSSCEEEEEET----------TTT
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC------cCeEEEccCCCEEEEEEcC----------CCC
Confidence 77655442 2479999995 999998864321 57999999999 9998874 279
Q ss_pred eEEEEeCCCCeEEEEe
Q 011452 399 SINISNILTGKCLAKI 414 (485)
Q Consensus 399 tIklWdl~TGk~l~tl 414 (485)
+|-++|+.|++.++++
T Consensus 394 ~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 394 TLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCCEEEEe
Confidence 9999999999999998
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.42 E-value=6e-11 Score=115.50 Aligned_cols=233 Identities=11% Similarity=0.043 Sum_probs=158.7
Q ss_pred CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC
Q 011452 125 NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN 204 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn 204 (485)
+..+..|.. ...+..+.+|+|+|+.|+.+. ... ..+..|+. .|+. ..|.. ....+..++|+ ++
T Consensus 34 ~~~~~~l~~-~~~~~egp~~~~~g~~l~~~d--~~~-------~~i~~~~~-~g~~----~~~~~-~~~~~~gl~~d-~d 96 (305)
T 3dr2_A 34 DARLLTLYD-QATWSEGPAWWEAQRTLVWSD--LVG-------RRVLGWRE-DGTV----DVLLD-ATAFTNGNAVD-AQ 96 (305)
T ss_dssp TCCCEEEEC-CCSSEEEEEEEGGGTEEEEEE--TTT-------TEEEEEET-TSCE----EEEEE-SCSCEEEEEEC-TT
T ss_pred CCceEEEec-CCcCccCCeEeCCCCEEEEEE--CCC-------CEEEEEeC-CCCE----EEEeC-CCCccceeeEC-CC
Confidence 334444444 344678999999999665533 222 46777774 6654 23443 33557789998 79
Q ss_pred CeEEEEeeCCCcEEEeecCCCeEEEEE---cC---CcEEEEEEcCCceEEEEEc----C-----------CCCeeEEEEe
Q 011452 205 GKVLTYSAQDSIYKVFDLKNYTMLYSI---SD---KNVQEIKISPGIMLLIFTK----A-----------SGHVPLKILS 263 (485)
Q Consensus 205 G~~Las~s~D~tiKlWdl~~g~~l~tl---~~---~~V~~VafSpg~~ll~sss----~-----------~~D~tIklWd 263 (485)
|+++++...++.|.+||.+ |+..... .+ ..+++++++|++.+.++.+ . .....|..+|
T Consensus 97 G~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 97 QRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred CCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEc
Confidence 9988877777899999986 6643222 11 3577899999888777521 0 0125688888
Q ss_pred cCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCC------CcEEEEECCCCeeE--Eec-ccCCCceEEEEEcCCCcE
Q 011452 264 IEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNFELT--EVS-RTEFMTPSAFIFLYENQL 334 (485)
Q Consensus 264 i~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D------~tIkIWDv~tg~~~--~~l-~gh~~~v~avaFspdg~l 334 (485)
.++|+..... .......++|+ |++..|.++..+ +.|.+||+..+.+. +.+ ......+..+++.++|++
T Consensus 176 ~~~g~~~~~~--~~~~p~gl~~s-pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 176 PDGSPLQRMA--DLDHPNGLAFS-PDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL 252 (305)
T ss_dssp SSSCCCEEEE--EESSEEEEEEC-TTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE
T ss_pred CCCCcEEEEe--cCCCCcceEEc-CCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE
Confidence 8788765433 23455688986 777778777543 79999999865421 111 112345677899999997
Q ss_pred EEEEeCCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 335 FLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 335 laS~sD~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
.++..++ |.+||.+|+++..+..+. . +.+++|+||++.|..++.
T Consensus 253 wv~~~~g-v~~~~~~g~~~~~~~~~~-~-----~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 253 WSSSGTG-VCVFDSDGQLLGHIPTPG-T-----ASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EECCSSE-EEEECTTSCEEEEEECSS-C-----CCEEEECTTSCEEEEEET
T ss_pred EEecCCc-EEEECCCCCEEEEEECCC-c-----eeEEEEeCCCCEEEEEcC
Confidence 7766454 999999999998887654 2 689999999988887764
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.42 E-value=3e-11 Score=126.89 Aligned_cols=283 Identities=13% Similarity=0.110 Sum_probs=180.6
Q ss_pred eeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEee----------CC
Q 011452 145 NKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QD 214 (485)
Q Consensus 145 spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s----------~D 214 (485)
-|+++.+..+.. .+ .++. .++.+-|..+++... .+.. -..| .++|+ |||+.|..+. .+
T Consensus 81 ~~~~~~vyV~n~--~~--~~~~-~~VsVID~~t~~vv~---~I~v--G~~P-gia~S-pDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 81 APDARRVYIQDP--AH--FAAI-TQQFVIDGSTGRILG---MTDG--GFLP-HPVAA-EDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCCTTEEEEEEC--TT--TCSS-EEEEEEETTTTEEEE---EEEE--CSSC-EEEEC-TTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCCEEEEECC--Cc--CCCC-CeEEEEECCCCEEEE---EEEC--CCCC-ceEEC-CCCCEEEEEeccccccccCCCC
Confidence 356666554332 11 1223 588888988887632 2222 2356 89998 7998766554 47
Q ss_pred CcEEEeecCCCeEEEEEc-C--------CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEE
Q 011452 215 SIYKVFDLKNYTMLYSIS-D--------KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDF 285 (485)
Q Consensus 215 ~tiKlWdl~~g~~l~tl~-~--------~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f 285 (485)
++|-++|..+++.+.++. + ..-..++|||++..|..+....+.+|-+.|+++++.++++.- ... +..
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g~--~~~ 224 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PDC--YHI 224 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSE--EEE
T ss_pred CEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CCc--eee
Confidence 899999999999988874 2 233578999866555443332247899999999999999873 111 222
Q ss_pred EecCC-CEEEEEeCCCcEEEEECCCCeeEEe----cccCCCc-eEEEEEcCCCcEEEEEe-CCcEEEEeCCCcEEE---E
Q 011452 286 IEQFN-EKLLVKQENENLQILDVRNFELTEV----SRTEFMT-PSAFIFLYENQLFLTFR-NRTVAVWNFRGELVT---S 355 (485)
Q Consensus 286 ~~~~~-~~lls~s~D~tIkIWDv~tg~~~~~----l~gh~~~-v~avaFspdg~llaS~s-D~TIklWd~~G~ll~---t 355 (485)
. |++ ..+++-+.|+++-+.|..+++...+ +.-.... ...+.|+++++.++-.+ .++|.+-|..+..+. +
T Consensus 225 ~-p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~ 303 (426)
T 3c75_H 225 F-PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAP 303 (426)
T ss_dssp E-EEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCC
T ss_pred c-cCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeee
Confidence 2 333 3344456888888888876665432 1111111 12356899988877667 889999998644322 2
Q ss_pred ee---cC---CCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccC
Q 011452 356 FE---DH---LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCS 429 (485)
Q Consensus 356 l~---gH---~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~ 429 (485)
++ .. ..|.+.. ...++|+|||++|....... .+..-...+++|-+.|+.|++.+++|..-.
T Consensus 304 ~~~~~~~~i~~g~~p~g-~~~va~s~dg~rlyVa~~~~-~~gthk~~s~~VsVID~~T~kvv~~I~vg~----------- 370 (426)
T 3c75_H 304 IEALTEAERADDWRPGG-WQQTAYHRQSDRIYLLVDQR-DEWKHKAASRFVVVLNAETGERINKIELGH----------- 370 (426)
T ss_dssp EESSCTTTGGGTEEECS-SSCEEEEGGGTEEEEEEEEC-CTTCTTSCEEEEEEEETTTCCEEEEEEEEE-----------
T ss_pred eeeccccccccccccCC-ceeeEEcCCCCEEEEEeccc-ccccccCCCCEEEEEECCCCeEEEEEECCC-----------
Confidence 11 00 0121111 23489999999777664210 000000013689999999999999996532
Q ss_pred CCCCCCCccccccccccccccchhcccCCeEEEEEcCCCC-EEEEec-CCCcEEEccC
Q 011452 430 GDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRN-EIYTGN-RHGLVHVWSN 485 (485)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~-~LaSgs-~DgtVklWd~ 485 (485)
..++++|+|||+ .||+.+ .+++|-|+|.
T Consensus 371 ----------------------------~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 371 ----------------------------EIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp ----------------------------EECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred ----------------------------CcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 467899999999 999999 5999999873
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.40 E-value=1.7e-11 Score=126.26 Aligned_cols=282 Identities=8% Similarity=-0.020 Sum_probs=172.8
Q ss_pred CEEEEEeCCC----eEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcC
Q 011452 106 DIVFALAQSG----VCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD 181 (485)
Q Consensus 106 ~~ias~s~dg----tiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~ 181 (485)
...++...++ ++-+.|.++++.+.++..+.. + .++|||||+.|..+..+.......=...++.++|+.+++..
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 4444444455 788999999999999987554 5 79999999999887643100000001268999999999874
Q ss_pred cccceeeec---cccCceEEEEeCCCCeEEEEeeC--CCcEEE--eecCCCeEEEEEcCCcEEEEEEcC-CceEEEEEcC
Q 011452 182 AGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQ--DSIYKV--FDLKNYTMLYSISDKNVQEIKISP-GIMLLIFTKA 253 (485)
Q Consensus 182 ~~~~lf~~~---~~~~~~~V~Fs~pnG~~Las~s~--D~tiKl--Wdl~~g~~l~tl~~~~V~~VafSp-g~~ll~sss~ 253 (485)
...++=... ....|..++|| |||++|..+.. +.++.| +|+++ +.++.-... +.+.| +....++ .
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~S-pDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~--~~~~p~g~~~~~~--~ 181 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNC-ASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC--FHIHPGAAATHYL--G 181 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEEC-TTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC--CCCEEEETTEEEC--C
T ss_pred EEEECCCccccccCCCcceEEEc-CCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc--eEEccCCCeEEEE--E
Confidence 322211000 11356789998 79988777653 467989 99877 444431110 11233 2222222 1
Q ss_pred CCCeeEEEEecCC-----CeEEEEee--cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCe--eEEecc-------
Q 011452 254 SGHVPLKILSIED-----GTVLKSFN--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFE--LTEVSR------- 317 (485)
Q Consensus 254 ~~D~tIklWdi~t-----G~~L~tl~--~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~--~~~~l~------- 317 (485)
..|+.+-+-|+++ |+.+.+.. -..+.. ..+ . ++++.++..+. ++|.+.|+.++. .+..+.
T Consensus 182 ~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~-P~~-~-~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~ 257 (368)
T 1mda_H 182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQ-AAQ-A-NYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRK 257 (368)
T ss_dssp CCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSC-CEE-E-TTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHH
T ss_pred cCCCCEEEEECccccccCCeEEEEeeeeeeCCCC-ccc-c-ccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccc
Confidence 2334555556665 54432110 000111 113 2 56777777777 999999997643 222221
Q ss_pred cCCCceEE---EEEcCCCcEEEE-Ee-C-C-------cEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCE-EEE
Q 011452 318 TEFMTPSA---FIFLYENQLFLT-FR-N-R-------TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL-IIS 382 (485)
Q Consensus 318 gh~~~v~a---vaFspdg~llaS-~s-D-~-------TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~-LaS 382 (485)
.+...+.. ++|+|||+.+.. .. + + .+.++|+. ++.+.++.... . .+.|+|+|||++ +++
T Consensus 258 ~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~-----p~gi~~s~Dg~~l~va 331 (368)
T 1mda_H 258 ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-D-----SDAIIAAQDGASDNYA 331 (368)
T ss_dssp HTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-E-----ECEEEECCSSSCEEEE
T ss_pred ccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-C-----cceEEECCCCCEEEEE
Confidence 01111111 689999876654 33 3 2 56699995 99999887544 2 579999999985 454
Q ss_pred EecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 383 YCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 383 ~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
... .+++|-++|+.|++.++++....
T Consensus 332 ~~~----------~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 332 NSA----------GTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EET----------TTTEEEEEESSSCEEEEECCCCS
T ss_pred ccC----------CCCeEEEEECCCCcEEEEEECCC
Confidence 441 16999999999999999998765
No 227
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=9.8e-12 Score=129.18 Aligned_cols=170 Identities=14% Similarity=0.151 Sum_probs=130.1
Q ss_pred CceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe-------------EEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEE
Q 011452 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------------MLYSISDKNVQEIKISPGIMLLIFTKASGHVPLK 260 (485)
Q Consensus 194 ~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~-------------~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIk 260 (485)
.+..++++ +...+|+.|+.| .++||++++.. .+..+. . |..|+| ++..|+++ .++.|+
T Consensus 39 ~~nlLais-~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp-~-V~~l~f-d~~~L~v~----~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDIS-NSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIP-D-VIFVCF-HGDQVLVS----TRNALY 109 (388)
T ss_dssp CCBCEEEE-TTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECT-T-EEEEEE-ETTEEEEE----ESSEEE
T ss_pred cccEEEEc-CCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCC-C-eeEEEE-CCCEEEEE----cCCcEE
Confidence 34578998 577788888887 56679976433 233333 3 999999 76676665 237999
Q ss_pred EEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-
Q 011452 261 ILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR- 339 (485)
Q Consensus 261 lWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s- 339 (485)
+||+.+-....++..|...+..+.+..| .+++...||+|.+||+.++.+.. +...|.+++|||+| ++.+.
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEET
T ss_pred EEEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEc
Confidence 9998877666666666677778877644 38888999999999999888754 34589999999999 45565
Q ss_pred CCcEEEEeCCC-cE--EEEe------e---cCCCCCCCCCeeEEEECCCCCEEEEEecC
Q 011452 340 NRTVAVWNFRG-EL--VTSF------E---DHLLWHPDCNTNNIYITSDQDLIISYCKA 386 (485)
Q Consensus 340 D~TIklWd~~G-~l--l~tl------~---gH~~~~~~~~v~svafSpDG~~LaS~s~d 386 (485)
|++|++|+.++ ++ ..++ + +|... |.+|.|.+++++|+++...
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~-----V~sI~wl~~~~flv~y~~~ 234 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYS-----PLSVTILSPQDFLAVFGNV 234 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSE-----EEEEEESSSSEEEEEEECC
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCee-----EEEEEEecCCeEEEEEcCC
Confidence 99999999974 44 6777 3 35544 9999999999999999874
No 228
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.36 E-value=1.8e-11 Score=127.30 Aligned_cols=168 Identities=10% Similarity=0.025 Sum_probs=126.4
Q ss_pred CcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCe-----------EEEEeecCCcceeEEEEEecCCCEEEEEeCCCc
Q 011452 234 KNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGT-----------VLKSFNHLLHRNKKVDFIEQFNEKLLVKQENEN 301 (485)
Q Consensus 234 ~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~-----------~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~t 301 (485)
..++.+++|+ .+.++++ +. ..+++|++++.. ..... .+.. +..|+| ++..|+++ .++.
T Consensus 38 ~~~nlLais~~~gll~a~-~~---~~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~ 107 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAA-SG---SKAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNA 107 (388)
T ss_dssp SCCBCEEEETTTTEEEEE-ET---TEEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSE
T ss_pred ccccEEEEcCCCCEEEEe-CC---CEEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCc
Confidence 3688899997 5555544 43 278889876443 11122 2335 899999 57777777 8999
Q ss_pred EEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCE
Q 011452 302 LQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 379 (485)
Q Consensus 302 IkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~ 379 (485)
|++||+++.........|...+..+.+.+.. +|... ||+|.+||+. +.+.. +... |.+++|||+|
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~-----Vs~v~WSpkG-- 174 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQN-----VTSFDVTNSQ-- 174 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEES-----EEEEEECSSE--
T ss_pred EEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCC-----ceEEEEcCCc--
Confidence 9999999877666666777888888887654 67777 9999999996 77654 2223 9999999999
Q ss_pred EEEEecCCCCCCCCcCCCCeEEEEeCCCCeE--EEEecC---------CCCCCCCcccccCCCCCCCCcccccccccccc
Q 011452 380 IISYCKADSDDPLAEGNAGSINISNILTGKC--LAKIRA---------SNGLPAENECSCSGDYSSGSCNVKKHSHASRI 448 (485)
Q Consensus 380 LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~--l~tl~g---------H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (485)
++.|+. ||+|++|+..++++ .++|.. |+
T Consensus 175 ~~vg~~-----------dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~------------------------------ 213 (388)
T 1xip_A 175 LAVLLK-----------DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEE------------------------------ 213 (388)
T ss_dssp EEEEET-----------TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTT------------------------------
T ss_pred eEEEEc-----------CCcEEEEcCCCccccccceecCCcccccccCCC------------------------------
Confidence 566776 79999999988887 788832 32
Q ss_pred ccchhcccCCeEEEEEcCCCCEEEE
Q 011452 449 RSTVAEALEDITALFYDEDRNEIYT 473 (485)
Q Consensus 449 ~~~~~~~l~~V~sl~fspDg~~LaS 473 (485)
-.|.+|.|.+++++|++
T Consensus 214 --------~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 214 --------YSPLSVTILSPQDFLAV 230 (388)
T ss_dssp --------SEEEEEEESSSSEEEEE
T ss_pred --------eeEEEEEEecCCeEEEE
Confidence 28999999999999887
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.34 E-value=2.8e-10 Score=125.39 Aligned_cols=244 Identities=14% Similarity=0.087 Sum_probs=158.9
Q ss_pred EEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCC----cEEEEEEcC---CceEEEEEcCC---CCeeEEEEecCCC
Q 011452 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK----NVQEIKISP---GIMLLIFTKAS---GHVPLKILSIEDG 267 (485)
Q Consensus 198 V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~----~V~~VafSp---g~~ll~sss~~---~D~tIklWdi~tG 267 (485)
++.. +|+ |..++.|+.+..+|.+||+.+-+.... ....+..+| ++.+++..+.. .++.|..||.+||
T Consensus 117 ~~~~--~g~-v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 117 VAVW--KGK-VYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETG 193 (689)
T ss_dssp CEEE--TTE-EEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred cEEE--CCE-EEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCC
Confidence 4443 455 455678999999999999988766421 122333344 66666653321 3589999999999
Q ss_pred eEEEEeecCC------------------------------ccee-EEEEEecCCCEEEEEeCCC----------------
Q 011452 268 TVLKSFNHLL------------------------------HRNK-KVDFIEQFNEKLLVKQENE---------------- 300 (485)
Q Consensus 268 ~~L~tl~~~~------------------------------~~~~-~V~f~~~~~~~lls~s~D~---------------- 300 (485)
+++.++.... +.++ .+++. +.++.+.++..++
T Consensus 194 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d-~~~~~vy~~~~~g~~w~~~~~~~~~gd~~ 272 (689)
T 1yiq_A 194 KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYD-PELNLLYIGVGNGSLWDPKWRSQAKGDNL 272 (689)
T ss_dssp CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHHTTCSCCT
T ss_pred cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEc-CCCCEEEEeCCCCCccccCCCCCCCCCce
Confidence 9998875210 0112 46665 5677888877665
Q ss_pred ---cEEEEECCCCeeEEeccc--CCC-------ceEEEEEcCCCc---EEEEEe-CCcEEEEeCC-CcEEEEeec-CCCC
Q 011452 301 ---NLQILDVRNFELTEVSRT--EFM-------TPSAFIFLYENQ---LFLTFR-NRTVAVWNFR-GELVTSFED-HLLW 362 (485)
Q Consensus 301 ---tIkIWDv~tg~~~~~l~g--h~~-------~v~avaFspdg~---llaS~s-D~TIklWd~~-G~ll~tl~g-H~~~ 362 (485)
.|..||.+||+.+-.... |.. .+.......+|+ .++.++ ||.+.++|.+ |+++...+- +..|
T Consensus 273 y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w 352 (689)
T 1yiq_A 273 FLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSW 352 (689)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccc
Confidence 499999999998766543 321 122222334776 788888 9999999995 999843321 1111
Q ss_pred CC--------------------C------------C-CeeEEEECCCCCEEEEEecCCCC----CC-----------CCc
Q 011452 363 HP--------------------D------------C-NTNNIYITSDQDLIISYCKADSD----DP-----------LAE 394 (485)
Q Consensus 363 ~~--------------------~------------~-~v~svafSpDG~~LaS~s~d~~~----d~-----------~~~ 394 (485)
.. + . +-..++|+|+.+++...+.+-.. +. .-.
T Consensus 353 ~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (689)
T 1yiq_A 353 TKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQL 432 (689)
T ss_dssp EEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCC
T ss_pred ccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccccccccc
Confidence 00 0 0 01247999999999887542100 00 000
Q ss_pred C-------------------CCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcc
Q 011452 395 G-------------------NAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEA 455 (485)
Q Consensus 395 ~-------------------~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (485)
+ .+|+|+.||+.|||.+.+++.+.
T Consensus 433 g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~------------------------------------- 475 (689)
T 1yiq_A 433 GLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT------------------------------------- 475 (689)
T ss_dssp SSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-------------------------------------
T ss_pred CccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-------------------------------------
Confidence 1 14899999999999999987664
Q ss_pred cCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 456 LEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 456 l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
.+.+-.++..|..|+.|+.|+.|++||
T Consensus 476 --~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 476 --IFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp --SCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred --CccCccceECCCEEEEECCCCcEEEEE
Confidence 222345667889999999999999998
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.30 E-value=4.5e-10 Score=123.48 Aligned_cols=245 Identities=11% Similarity=0.035 Sum_probs=161.3
Q ss_pred EEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCC-------cEEE-EEEcCCceEEEEEcCC---CCeeEEEEecC
Q 011452 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-------NVQE-IKISPGIMLLIFTKAS---GHVPLKILSIE 265 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~-------~V~~-VafSpg~~ll~sss~~---~D~tIklWdi~ 265 (485)
.++++ ++++ ..++.|+.+..+|.++|+.+.++... .+.+ ..+ .++.+++..+.. .++.|..+|.+
T Consensus 123 ~~a~~--~~~v-~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~ 198 (677)
T 1kb0_A 123 GVALW--KGKV-YVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAE 198 (677)
T ss_dssp CCEEE--TTEE-EEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETT
T ss_pred CceEE--CCEE-EEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECC
Confidence 35554 4554 44677999999999999998777532 2211 111 156666553321 25899999999
Q ss_pred CCeEEEEeecCCcc-------------------------------e-eEEEEEecCCCEEEEEeCCC-------------
Q 011452 266 DGTVLKSFNHLLHR-------------------------------N-KKVDFIEQFNEKLLVKQENE------------- 300 (485)
Q Consensus 266 tG~~L~tl~~~~~~-------------------------------~-~~V~f~~~~~~~lls~s~D~------------- 300 (485)
||+++.++...... + ..+++. ++++.+.++..++
T Consensus 199 tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d-~~~~~vy~~~~~~~~w~~~~~~~~~g 277 (677)
T 1kb0_A 199 TGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFD-AELNTMYVGTGNGSPWSHKVRSPKGG 277 (677)
T ss_dssp TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHSTTCC
T ss_pred CCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEc-CCCCEEEEECCCCccccCCCCCccCC
Confidence 99999888632111 1 145664 5677888775543
Q ss_pred ------cEEEEECCCCeeEEecc--cCC-------CceEEEEEcCCC---cEEEEEe-CCcEEEEeCC-CcEEEEeecC-
Q 011452 301 ------NLQILDVRNFELTEVSR--TEF-------MTPSAFIFLYEN---QLFLTFR-NRTVAVWNFR-GELVTSFEDH- 359 (485)
Q Consensus 301 ------tIkIWDv~tg~~~~~l~--gh~-------~~v~avaFspdg---~llaS~s-D~TIklWd~~-G~ll~tl~gH- 359 (485)
+|..+|.+||+.+-... .|. ..+..+.+..|| +.++.++ ++.|.++|.+ |+++..+.-.
T Consensus 278 d~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~ 357 (677)
T 1kb0_A 278 DNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVP 357 (677)
T ss_dssp CCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred CCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence 59999999999876543 232 223334445588 6788888 9999999995 9998776521
Q ss_pred CCCC----CCCC-e------------------------eEEEECCCCCEEEEEecCCCCC-----CCC------------
Q 011452 360 LLWH----PDCN-T------------------------NNIYITSDQDLIISYCKADSDD-----PLA------------ 393 (485)
Q Consensus 360 ~~~~----~~~~-v------------------------~svafSpDG~~LaS~s~d~~~d-----~~~------------ 393 (485)
..|. ..|. + ..++|+|++.++...+.+-..+ ...
T Consensus 358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 437 (677)
T 1kb0_A 358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSG 437 (677)
T ss_dssp CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGG
T ss_pred cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccc
Confidence 1110 0000 0 2578999999998865410000 000
Q ss_pred ---------------cCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCC
Q 011452 394 ---------------EGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALED 458 (485)
Q Consensus 394 ---------------~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 458 (485)
....|+|..||+.|||.+.+++... .
T Consensus 438 ~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~---------------------------------------~ 478 (677)
T 1kb0_A 438 TGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS---------------------------------------P 478 (677)
T ss_dssp GTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS---------------------------------------S
T ss_pred cccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC---------------------------------------C
Confidence 0123899999999999999886432 3
Q ss_pred eEEEEEcCCCCEEEEecCCCcEEEccC
Q 011452 459 ITALFYDEDRNEIYTGNRHGLVHVWSN 485 (485)
Q Consensus 459 V~sl~fspDg~~LaSgs~DgtVklWd~ 485 (485)
+++..++++|..++.|+.||.|++||.
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred CcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 444567788999999999999999983
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=2.2e-12 Score=130.82 Aligned_cols=146 Identities=12% Similarity=0.019 Sum_probs=81.0
Q ss_pred CceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCC-c
Q 011452 244 GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFM-T 322 (485)
Q Consensus 244 g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~-~ 322 (485)
++++++++ .|+.|..||.++|+++.+++. +.+.+..+. .++..+++++.|++|..||.++|+.+.....+.. .
T Consensus 9 ~~~v~~gs---~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~-~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 9 ETLLFVST---LDGSLHAVSKRTGSIKWTLKE--DPVLQVPTH-VEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp TTEEEEEE---TTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred CCEEEEEc---CCCEEEEEECCCCCEEEEecC--CCceecceE-cCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 66666653 347999999999999999985 444444443 3344555568999999999999998766644321 1
Q ss_pred eE-EEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCe
Q 011452 323 PS-AFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGS 399 (485)
Q Consensus 323 v~-avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dgt 399 (485)
+. +.++..+ .++++++ |++|..||.+ |+++.+++.+. .+.++|++..|+.++. |++
T Consensus 83 ~~~sp~~~~~-~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------~~~~~p~~~~v~~~~~-----------dg~ 141 (369)
T 2hz6_A 83 VQASPCRSSD-GILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------ADSLSPSTSLLYLGRT-----------EYT 141 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC-------------------------------EEEEEE-----------EEE
T ss_pred cccCceEecC-CEEEEEeCCCEEEEEECCCCcEEEEecCCC---------cccccccCCEEEEEec-----------CCE
Confidence 11 1112234 4566666 9999999996 99998887653 2456789999999886 699
Q ss_pred EEEEeCCCCeEEEEecC
Q 011452 400 INISNILTGKCLAKIRA 416 (485)
Q Consensus 400 IklWdl~TGk~l~tl~g 416 (485)
|..||..||+++.++..
T Consensus 142 v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 142 ITMYDTKTRELRWNATY 158 (369)
T ss_dssp EECCCSSSSSCCCEEEE
T ss_pred EEEEECCCCCEEEeEec
Confidence 99999999998877754
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.18 E-value=2.2e-10 Score=117.97 Aligned_cols=256 Identities=9% Similarity=0.052 Sum_probs=156.0
Q ss_pred EEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEee----------CCCcEEEeecCCCeEEEEEc-C----
Q 011452 169 STRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QDSIYKVFDLKNYTMLYSIS-D---- 233 (485)
Q Consensus 169 t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s----------~D~tiKlWdl~~g~~l~tl~-~---- 233 (485)
++.+.|..+++... .+..+ ..| .++|+ |||+.|..+. .|++|.+||+.+++.+.++. +
T Consensus 47 ~vsvID~~t~~v~~---~i~vG--~~P-~i~~s-pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLG---HSLGA--FLS-LAVAG-HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEEEE---EEEEC--TTC-EEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeEEE---EEeCC--CCC-ceEEC-CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 66677877777632 23332 235 79998 7998877765 37899999999999999884 2
Q ss_pred ----CcEEEEEEcCCceEEEEEcCCCCeeEEE--EecCCCeEEEEeecCCcceeEEEEEecCCCEE-EEEeCCCcEEEEE
Q 011452 234 ----KNVQEIKISPGIMLLIFTKASGHVPLKI--LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL-LVKQENENLQILD 306 (485)
Q Consensus 234 ----~~V~~VafSpg~~ll~sss~~~D~tIkl--Wdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~l-ls~s~D~tIkIWD 306 (485)
..-..++|||++++|..+.......|.+ +|+++ ++++.- ... +.+. |+++.. ++.+.|+++-+-|
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v--~~~--~~~~-p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS--ASC--FHIH-PGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC--SSC--CCCE-EEETTEEECCCCTTSCEEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC--CCc--eEEc-cCCCeEEEEEcCCCCEEEEE
Confidence 2456799998665444333222256777 99977 555541 111 1122 334444 3447888988889
Q ss_pred CCC-----CeeEEe----cccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCCC---cEEEEeec------CCCCCCCCCe
Q 011452 307 VRN-----FELTEV----SRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG---ELVTSFED------HLLWHPDCNT 368 (485)
Q Consensus 307 v~t-----g~~~~~----l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~G---~ll~tl~g------H~~~~~~~~v 368 (485)
+.+ ++...+ ..-.. .+. ++.+++.++.... ++|.+-|+.+ +.+.++.- ...|.|.+ .
T Consensus 192 ~~~~~~~~~~v~~~~t~~i~vg~-~P~--~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g-~ 266 (368)
T 1mda_H 192 LAAAPAAAGIVGAQCTGAQNCSS-QAA--QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG-F 266 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCS-CCE--EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS-S
T ss_pred CccccccCCeEEEEeeeeeeCCC-Ccc--ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc-c
Confidence 987 543321 11111 222 3555666555555 8888888853 23333211 11222221 1
Q ss_pred eEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCcccccccccccc
Q 011452 369 NNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRI 448 (485)
Q Consensus 369 ~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (485)
..++|+|||++|.-+....+.. .....++ +.++|+.|++.+++|....
T Consensus 267 ~~v~~s~dg~~lyV~~~~~~~~-~~~~~~~-~~ViD~~t~~vv~~i~vg~------------------------------ 314 (368)
T 1mda_H 267 QMVAKLKNTDGIMILTVEHSRS-CLAAAEN-TSSVTASVGQTSGPISNGH------------------------------ 314 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSC-TTSCEEE-EEEEESSSCCEEECCEEEE------------------------------
T ss_pred eeeEEcCCCCEEEEEeccccCc-ccccCCC-EEEEECCCCeEEEEEECCC------------------------------
Confidence 2378999999887543100000 0000123 4499999999999997643
Q ss_pred ccchhcccCCeEEEEEcCCCCE-EEEec-CCCcEEEccC
Q 011452 449 RSTVAEALEDITALFYDEDRNE-IYTGN-RHGLVHVWSN 485 (485)
Q Consensus 449 ~~~~~~~l~~V~sl~fspDg~~-LaSgs-~DgtVklWd~ 485 (485)
..++++|+|||+. +++.. .+++|.|+|.
T Consensus 315 ---------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 315 ---------DSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp ---------EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred ---------CcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 5678999999984 66666 5999999983
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.17 E-value=2.2e-07 Score=88.26 Aligned_cols=205 Identities=11% Similarity=-0.003 Sum_probs=137.2
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCe
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGT 268 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~ 268 (485)
..++..++|++.++.+.++....+.|.++|+.+......+.. .....|+++| ++.+..+... ...|.++++. |+
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~-g~ 111 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMD-GT 111 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT--TTEEEEEETT-SC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC--CCEEEEEEcC-CC
Confidence 346778999854677888877889999999976654333432 4789999997 6777776543 3689999985 44
Q ss_pred EEEEee-cCCcceeEEEEEecCCCEEEEEeC---CCcEEEEECCCCeeEEecccCCCceEEEEEcCCC-cEEEEEe-CCc
Q 011452 269 VLKSFN-HLLHRNKKVDFIEQFNEKLLVKQE---NENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-QLFLTFR-NRT 342 (485)
Q Consensus 269 ~L~tl~-~~~~~~~~V~f~~~~~~~lls~s~---D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg-~llaS~s-D~T 342 (485)
..+.+. .....-..+++. ++++.|..+.. .+.|..+++...............+..++|+|++ .++++-. .+.
T Consensus 112 ~~~~~~~~~~~~P~~i~vd-~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTD-PVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp SCEEEECSSCSSEEEEEEE-TTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CEEEEEECCCCCccEEEEe-eCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 333332 212345688886 56777777653 4789888987433222222345689999999975 5566666 889
Q ss_pred EEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 343 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 343 IklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
|...|.+|..+..+-... .+ -.+|++ |+..|.-+.. ..+.|...|..+|+.++++...
T Consensus 191 I~~~~~~g~~~~~~~~~~-~~----P~gi~~--d~~~lyva~~----------~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEGL-QY----PFAVTS--YGKNLYYTDW----------KTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp EEEEETTEEEEEEEEECC-CS----EEEEEE--ETTEEEEEET----------TTTEEEEEETTTTEEEEEECCS
T ss_pred EEEEecCCCceEEEecCC-CC----ceEEEE--eCCEEEEEEC----------CCCeEEEEeCCCCCceEEEccc
Confidence 999999865443332211 11 346665 4555555543 1589999999999999999643
No 234
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=1.3e-08 Score=111.74 Aligned_cols=278 Identities=12% Similarity=0.124 Sum_probs=176.2
Q ss_pred ecCEEEEEeCCCeEEeeecccCcEEEEeecCCcc----------cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEe
Q 011452 104 ARDIVFALAQSGVCAAFCRETNQRICFLNVTADE----------VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (485)
Q Consensus 104 s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~----------~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw 173 (485)
.+++|+.++.++.+..+|.+||+.+=........ .-+++++ .+..|+.++ .+ ..+...
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~----~d------g~l~al 132 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGT----LD------GRLIAL 132 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEEC----TT------SEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEc----CC------CEEEEE
Confidence 4788999999999999999999988665432110 0133344 245565544 23 367777
Q ss_pred EeccCCcCcccceeeecccc----C-ce-EEEEeCCCCeEEEEeeC-----CCcEEEeecCCCeEEEEEcC---C-----
Q 011452 174 YIRRGKPDAGFALFESESLK----W-PG-FVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISD---K----- 234 (485)
Q Consensus 174 ~i~~G~~~~~~~lf~~~~~~----~-~~-~V~Fs~pnG~~Las~s~-----D~tiKlWdl~~g~~l~tl~~---~----- 234 (485)
|..+|++ +|+..... + +. .... .+|++++..+. ++.|..+|+++|+++-++.. .
T Consensus 133 D~~tG~~-----~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~ 205 (668)
T 1kv9_A 133 DAKTGKA-----IWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPY 205 (668)
T ss_dssp ETTTCCE-----EEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred ECCCCCE-----eeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccc
Confidence 8888887 55542110 0 00 1112 16777765442 68999999999999877641 1
Q ss_pred ------------------------cE-EEEEEcC-CceEEEEEcCCC-------------C----eeEEEEecCCCeEEE
Q 011452 235 ------------------------NV-QEIKISP-GIMLLIFTKASG-------------H----VPLKILSIEDGTVLK 271 (485)
Q Consensus 235 ------------------------~V-~~VafSp-g~~ll~sss~~~-------------D----~tIklWdi~tG~~L~ 271 (485)
.+ ..+++.| ++++.+. ..+. | ..|.-+|.+||+.+.
T Consensus 206 ~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~-~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W 284 (668)
T 1kv9_A 206 EHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVG-TGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW 284 (668)
T ss_dssp SSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE
T ss_pred cccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEe-CCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceee
Confidence 01 1368887 4444443 2221 0 149999999999999
Q ss_pred EeecCCccee------E-EEE-EecCCC---EEEEEeCCCcEEEEECCCCeeEEecccCC-----------Cce------
Q 011452 272 SFNHLLHRNK------K-VDF-IEQFNE---KLLVKQENENLQILDVRNFELTEVSRTEF-----------MTP------ 323 (485)
Q Consensus 272 tl~~~~~~~~------~-V~f-~~~~~~---~lls~s~D~tIkIWDv~tg~~~~~l~gh~-----------~~v------ 323 (485)
.++...+..+ . +.+ ...++. .+++++.|+.+.++|.+||+++....-.. ..+
T Consensus 285 ~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~ 364 (668)
T 1kv9_A 285 HYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGV 364 (668)
T ss_dssp EEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTT
T ss_pred EeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccc
Confidence 8874211111 1 111 112333 36667899999999999999873321110 000
Q ss_pred -------------------EEEEEcCCCcEEEE------------------------------------Ee-CCcEEEEe
Q 011452 324 -------------------SAFIFLYENQLFLT------------------------------------FR-NRTVAVWN 347 (485)
Q Consensus 324 -------------------~avaFspdg~llaS------------------------------------~s-D~TIklWd 347 (485)
..++|+|+..++.. .. +++|..||
T Consensus 365 ~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D 444 (668)
T 1kv9_A 365 RYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWD 444 (668)
T ss_dssp TCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEE
T ss_pred cccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEe
Confidence 12577887666542 12 48899999
Q ss_pred CC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 348 FR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 348 ~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
.. |+.+-..+.+.. ++...++..|.+|+.++. |+.++.||..||+.+..++-..
T Consensus 445 ~~tG~~~W~~~~~~~------~~~~~~~t~gg~vf~g~~-----------dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 445 PVKQKAAWKVPYPTH------WNGGTLSTAGNLVFQGTA-----------AGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp TTTTEEEEEEEESSS------CCCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCcEEEEccCCCC------CcCceeEeCCCEEEEECC-----------cccchhhhhhcChhheEecCCC
Confidence 95 999888765543 234455567888888876 7999999999999999987654
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.08 E-value=6.5e-08 Score=96.03 Aligned_cols=257 Identities=9% Similarity=0.059 Sum_probs=158.3
Q ss_pred EEEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCc
Q 011452 101 IVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKP 180 (485)
Q Consensus 101 i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~ 180 (485)
++..++.|+.++.++.+..+|.++|+.+-.... ......+... .+| .|+.++ .+ ..+...|..+|+.
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~-~~~~~~~p~~-~~~-~v~v~~----~~------g~l~~~d~~tG~~ 165 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV-AGEALSRPVV-SDG-LVLIHT----SN------GQLQALNEADGAV 165 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC-SSCCCSCCEE-ETT-EEEEEC----TT------SEEEEEETTTCCE
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC-CCceEcCCEE-ECC-EEEEEc----CC------CeEEEEECCCCcE
Confidence 445588999999999999999999998865554 2222222222 234 555433 23 4677778888886
Q ss_pred CcccceeeeccccCc------eEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCC-c--------EEEEEEcC--
Q 011452 181 DAGFALFESESLKWP------GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-N--------VQEIKISP-- 243 (485)
Q Consensus 181 ~~~~~lf~~~~~~~~------~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~-~--------V~~VafSp-- 243 (485)
+|.......+ ...... +|. +..++.++.+..+|+++|+.+...... . +..+.-+|
T Consensus 166 -----~W~~~~~~~~~~~~~~~~~~~~--~~~-v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (376)
T 3q7m_A 166 -----KWTVNLDMPSLSLRGESAPTTA--FGA-AVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV 237 (376)
T ss_dssp -----EEEEECCC-----CCCCCCEEE--TTE-EEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE
T ss_pred -----EEEEeCCCCceeecCCCCcEEE--CCE-EEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE
Confidence 4543211111 122332 455 445677999999999999988776421 0 11111223
Q ss_pred -CceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc-CCC
Q 011452 244 -GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT-EFM 321 (485)
Q Consensus 244 -g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g-h~~ 321 (485)
++.+.+.+ .++.|..+|.++|+.+..... .....+. .+++.+.++..++.|..+|..+|+.+-.... ...
T Consensus 238 ~~~~v~~~~---~~g~l~~~d~~tG~~~w~~~~--~~~~~~~---~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~ 309 (376)
T 3q7m_A 238 VNGVVFALA---YNGNLTALDLRSGQIMWKREL--GSVNDFI---VDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR 309 (376)
T ss_dssp ETTEEEEEC---TTSCEEEEETTTCCEEEEECC--CCEEEEE---EETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS
T ss_pred ECCEEEEEe---cCcEEEEEECCCCcEEeeccC--CCCCCce---EECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC
Confidence 55665552 347899999999999987763 2333333 2478899999999999999999998765531 122
Q ss_pred ceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeE
Q 011452 322 TPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSI 400 (485)
Q Consensus 322 ~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtI 400 (485)
.+.+.+. .++.+++...++.|.++|.+ |+++..++..... +.+.....+| .|..++. +|.|
T Consensus 310 ~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~-----~~~~~~~~~~-~l~v~~~-----------~G~l 371 (376)
T 3q7m_A 310 LLTSPVL-YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSG-----FQTEPVAADG-KLLIQAK-----------DGTV 371 (376)
T ss_dssp CCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTC-----BCSCCEEETT-EEEEEBT-----------TSCE
T ss_pred cccCCEE-ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCc-----ceeCCEEECC-EEEEEeC-----------CCEE
Confidence 2222222 35555544449999999985 9998877653222 2211111244 4555554 6888
Q ss_pred EEEe
Q 011452 401 NISN 404 (485)
Q Consensus 401 klWd 404 (485)
..+|
T Consensus 372 ~~~~ 375 (376)
T 3q7m_A 372 YSIT 375 (376)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8876
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.08 E-value=3.6e-08 Score=97.57 Aligned_cols=175 Identities=13% Similarity=0.062 Sum_probs=122.6
Q ss_pred CeEEEEEc-C--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCC-cceeEEEEEecCCCEEEEEe-CC
Q 011452 225 YTMLYSIS-D--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL-HRNKKVDFIEQFNEKLLVKQ-EN 299 (485)
Q Consensus 225 g~~l~tl~-~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~-~~~~~V~f~~~~~~~lls~s-~D 299 (485)
++.+.+++ + ...+.++|+|++.|..+++...+.+|.+.|+++|+.++++.-.. .....+++ ++++|.+.. .+
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~---~g~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL---LNEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE---ETTEEEEEETTC
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE---eCCEEEEEEecC
Confidence 45566664 3 34789999997787777554345799999999999999976211 12224554 366777765 78
Q ss_pred CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCC
Q 011452 300 ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ 377 (485)
Q Consensus 300 ~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG 377 (485)
+++-++|..+++.+.++.-.... ...++|||+.|..+. +++|.+.|.. .+.+.++.--....+-...+.+.|. ||
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC
Confidence 99999999999998887422122 244677887776666 8899999996 7888777622111111126788888 88
Q ss_pred CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 378 DLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 378 ~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
++.+..-. +++|-+-|..||+.+++|.-
T Consensus 163 ~lyvn~~~-----------~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 163 EVWANIWQ-----------TDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp EEEEEETT-----------SSEEEEEETTTCCEEEEEEC
T ss_pred EEEEecCC-----------CCeEEEEECCCCcEEEEEEC
Confidence 66555432 58999999999999999963
No 237
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.05 E-value=1.1e-06 Score=96.85 Aligned_cols=323 Identities=11% Similarity=0.095 Sum_probs=198.8
Q ss_pred cccceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEeecCCcc---cEEEEEEeeCCCEEEEEEeecCCCCcccceeE
Q 011452 94 KRSKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNVTADE---VIRSLFYNKNNDSLITVSVYASDNFSSLRCRS 169 (485)
Q Consensus 94 ~~s~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~---~i~sv~~spdg~~Las~S~d~~~d~stL~~~t 169 (485)
..+.|.+|... ...|-.++.+| +..||.++++... +...... .|++|+..++|..++... + .
T Consensus 86 ~~n~I~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~-~~~~~~~~~~~i~~i~~d~~g~lwi~t~-----~-------g 151 (795)
T 4a2l_A 86 ANDISRIVKTDSQGRVWIGTRDG-LSRYDEEKDIFQN-FFYEKNGKHLQVNGIEEISPEQLLISTP-----E-------G 151 (795)
T ss_dssp SCSCEEEEEECTTSCEEEEESSC-EEEEETTTTEEEE-ECCEETTEECCCCEEEEEETTEEEEEET-----T-------E
T ss_pred cccceeEEEECCCCCEEEEeCCc-hheeCCCCCeEEe-ccccccCCCceEEEEEECCCCCEEEEEC-----C-------c
Confidence 35679999888 44566677777 5678988776543 2221111 289999999998776522 2 3
Q ss_pred EEEeEeccCCcCcccceeee-ccccC-ceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE---cCCcEEEEEEcCC
Q 011452 170 TRIEYIRRGKPDAGFALFES-ESLKW-PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---SDKNVQEIKISPG 244 (485)
Q Consensus 170 ~~lw~i~~G~~~~~~~lf~~-~~~~~-~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl---~~~~V~~VafSpg 244 (485)
+.+++..++++.. +.. ..... +..+.++ ++|++.+. ..++-+..||.++++..... ....|.+|...++
T Consensus 152 l~~~~~~~~~~~~----~~~~~~~~~~i~~i~~d-~~g~lwig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~ 225 (795)
T 4a2l_A 152 LIMFDIKESKFID----DSFSTAMHKTIASTLYR-QGDQIYIG-TSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSP 225 (795)
T ss_dssp EEEEETTTTEEEC----SSSCHHHHTCCEEEEEE-ETTEEEEE-ESSSCEEEEETTTCCEEECC----CCCEEEEEEEET
T ss_pred eEEEECCCCEEEe----ccCCCCCCcceEEEEEC-CCCCEEEE-ECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCC
Confidence 5556654544311 111 00112 5677787 68888774 44445888998887754322 2457999998876
Q ss_pred ceEEEEEcCCCCeeEEEEecCCCeEEEEeecC-------CcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecc
Q 011452 245 IMLLIFTKASGHVPLKILSIEDGTVLKSFNHL-------LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR 317 (485)
Q Consensus 245 ~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~-------~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~ 317 (485)
+.+.++... .-|.++|..+++...-.... ...+.++... .++.|.++..+ -|.+||..+++......
T Consensus 226 g~lwigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d--~~g~lWigt~~-Gl~~~~~~~~~~~~~~~ 299 (795)
T 4a2l_A 226 TRIWVATEG---AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMD--SQNRLWIGTFN-DLNIYHEGTDSFASYSS 299 (795)
T ss_dssp TEEEEEEBS---SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEEC--TTSCEEEEESS-CEEEEETTTTEEEEECC
T ss_pred CCEEEEECC---CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEc--CCCCEEEEeCC-hhheEcCCCCeEEEEec
Confidence 666666432 35889999887654332111 1345566542 25567777666 69999999888765532
Q ss_pred c-------CCCceEEEEEcCCCcEEEEEeCCcEEEEeCCCcEEEEeecCC--CCCCCCCeeEEEECCCCCEEEEEecCCC
Q 011452 318 T-------EFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHL--LWHPDCNTNNIYITSDQDLIISYCKADS 388 (485)
Q Consensus 318 g-------h~~~v~avaFspdg~llaS~sD~TIklWd~~G~ll~tl~gH~--~~~~~~~v~svafSpDG~~LaS~s~d~~ 388 (485)
. ....|.++...++|.+.+...++-|..++........+.... ..-+...|.+++..++|.+.+. +.
T Consensus 300 ~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiG-t~--- 375 (795)
T 4a2l_A 300 NPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIG-TN--- 375 (795)
T ss_dssp CTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEE-ES---
T ss_pred CCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEE-EC---
Confidence 2 235799999999999887666777889998633333332110 0001223899999999998884 33
Q ss_pred CCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCC
Q 011452 389 DDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDR 468 (485)
Q Consensus 389 ~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg 468 (485)
++-|..||..+++...-.....+ + . ... ....|.+++.+++|
T Consensus 376 --------~~Gl~~~~~~~~~~~~~~~~~~~-~--------~----------~~l-----------~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 376 --------DGGLNLYNPITQRFTSYTLQEDE-S--------A----------RGI-----------GSNNIKAVYVDEKK 417 (795)
T ss_dssp --------SSCEEEECTTTCCEEEECCC-------------------------CC-----------SCSCEEEEEEETTT
T ss_pred --------CCCeEEEcCCCCcEEEEecCCCC-c--------c----------cCC-----------CCccEEEEEEcCCC
Confidence 46799999888876543322110 0 0 000 00279999999999
Q ss_pred CEEEEecCCCcEEEcc
Q 011452 469 NEIYTGNRHGLVHVWS 484 (485)
Q Consensus 469 ~~LaSgs~DgtVklWd 484 (485)
+.|.-|+.++-|.++|
T Consensus 418 ~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 418 SLVYIGTHAGGLSILH 433 (795)
T ss_dssp TEEEEEETTTEEEEEE
T ss_pred CEEEEEeCcCceeEEe
Confidence 9555566654455554
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.03 E-value=5.9e-07 Score=85.29 Aligned_cols=190 Identities=10% Similarity=0.083 Sum_probs=124.6
Q ss_pred eEEEEeeCCCcEEEeecCCCeE-------EEEEcCCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEEeecCC
Q 011452 206 KVLTYSAQDSIYKVFDLKNYTM-------LYSISDKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL 277 (485)
Q Consensus 206 ~~Las~s~D~tiKlWdl~~g~~-------l~tl~~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~ 277 (485)
+.|..+.. +.|+.+|+..... +..........++++| ++.+..+... .+.|..+++.++.....+....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS--EPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT--TTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC--CCEEEEEecCCCCcEEEEECCC
Confidence 44444443 4788888765432 2222335678999997 6777776543 3689999987665443343323
Q ss_pred cceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcCC-CcEEEEEe---CCcEEEEeCCCcE
Q 011452 278 HRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE-NQLFLTFR---NRTVAVWNFRGEL 352 (485)
Q Consensus 278 ~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspd-g~llaS~s---D~TIklWd~~G~l 352 (485)
.....+++. ++++.|.++ ...+.|.++|+...............+..+++.|+ |.++++.. .+.|...+++|+.
T Consensus 79 ~~p~~ia~d-~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 79 GSPEGIALD-HLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CCccEEEEE-ecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 456688886 556777776 47789999999854433333333468999999995 66666664 2688888998776
Q ss_pred EEEee-cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 353 VTSFE-DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 353 l~tl~-gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
.+.+. ....+ -+.++|+||++.|.-+.. ..+.|...|+.+++....+
T Consensus 158 ~~~~~~~~~~~-----P~gia~d~~~~~lyv~d~----------~~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 158 RRILAQDNLGL-----PNGLTFDAFSSQLCWVDA----------GTHRAECLNPAQPGRRKVL 205 (267)
T ss_dssp CEEEECTTCSC-----EEEEEEETTTTEEEEEET----------TTTEEEEEETTEEEEEEEE
T ss_pred cEEEEECCCCC-----CcEEEEcCCCCEEEEEEC----------CCCEEEEEecCCCceEEEe
Confidence 55553 22222 689999999877765543 2589999998755443333
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.00 E-value=9.5e-08 Score=101.32 Aligned_cols=200 Identities=12% Similarity=0.075 Sum_probs=132.6
Q ss_pred CCe-EEEEeeCCCcEEEeecCCC----eEEEEEc--------C-CcEEEEEEcCCceEEEEEcCCC----CeeEEEEecC
Q 011452 204 NGK-VLTYSAQDSIYKVFDLKNY----TMLYSIS--------D-KNVQEIKISPGIMLLIFTKASG----HVPLKILSIE 265 (485)
Q Consensus 204 nG~-~Las~s~D~tiKlWdl~~g----~~l~tl~--------~-~~V~~VafSpg~~ll~sss~~~----D~tIklWdi~ 265 (485)
+++ +++++-.+++|.|.|+++- ++..++. + ..=..+..+|++ +++++.++. .+.|-+.|.+
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 454 4566778999999999865 6778883 2 134568889988 555554432 2689999999
Q ss_pred CCeEEEEeecCCcc---eeEEEEEecCCCEEEEEe-------------------CCCcEEEEECCCCeeEEeccc--CCC
Q 011452 266 DGTVLKSFNHLLHR---NKKVDFIEQFNEKLLVKQ-------------------ENENLQILDVRNFELTEVSRT--EFM 321 (485)
Q Consensus 266 tG~~L~tl~~~~~~---~~~V~f~~~~~~~lls~s-------------------~D~tIkIWDv~tg~~~~~l~g--h~~ 321 (485)
|++++.+..--.+. -..+.|+ |+...++++. .+.+|.+||+.+++.++++.- ...
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~-p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWN-LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEE-TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCeEEEEEccCCCCccccceEEEC-CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999999721111 2246666 5666666663 389999999999988887643 223
Q ss_pred ceEEEEE--cCCCcEEEEEe-------CCcEEEEeCC-CcE--EEEe--ecCC-CC-CC---------CCCeeEEEECCC
Q 011452 322 TPSAFIF--LYENQLFLTFR-------NRTVAVWNFR-GEL--VTSF--EDHL-LW-HP---------DCNTNNIYITSD 376 (485)
Q Consensus 322 ~v~avaF--spdg~llaS~s-------D~TIklWd~~-G~l--l~tl--~gH~-~~-~~---------~~~v~svafSpD 376 (485)
.+..+.| +|+|+++-.++ +++|-+|..+ |+. ++.+ .... .+ -+ ......|.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 4555655 99998755432 4578777764 542 2221 1110 00 00 012578999999
Q ss_pred CCEEEEEecCCCCCCCCcCCCCeEEEEeCC---CCeEEEEec
Q 011452 377 QDLIISYCKADSDDPLAEGNAGSINISNIL---TGKCLAKIR 415 (485)
Q Consensus 377 G~~LaS~s~d~~~d~~~~~~DgtIklWdl~---TGk~l~tl~ 415 (485)
|++|-.++.. .++|.++|+. +.+.+.++.
T Consensus 332 GrfLYVSnrg----------~d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 332 DKFLYLSLWG----------IGEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp SCEEEEEETT----------TTEEEEEECSSTTSCEEEEEEE
T ss_pred CCEEEEEeCC----------CCEEEEEEecCCCCcEEEEEEE
Confidence 9999998872 5899999985 346676664
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.00 E-value=3.3e-07 Score=98.89 Aligned_cols=279 Identities=14% Similarity=0.071 Sum_probs=172.6
Q ss_pred ecCEEEEEeC-CCeEEeeec-ccCcEEEEeecCCcc----------cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 104 ARDIVFALAQ-SGVCAAFCR-ETNQRICFLNVTADE----------VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 104 s~~~ias~s~-dgtiklW~~-~tG~~l~tl~g~~~~----------~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
.+++|+.++. ++.+..+|. +||+.+=........ .-+++++ ++..|+.++ .+ ..+.
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~----~d------g~l~ 128 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQ----AN------GHLL 128 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC----TT------SEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEe----CC------CEEE
Confidence 4788888888 899999999 899988655432111 1123444 345565543 22 3566
Q ss_pred EeEeccCCcCcccceeeecccc-----Cce-EEEEeCCCCeEEEEeeC-----CCcEEEeecCCCeEEEEEcCC-cE---
Q 011452 172 IEYIRRGKPDAGFALFESESLK-----WPG-FVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISDK-NV--- 236 (485)
Q Consensus 172 lw~i~~G~~~~~~~lf~~~~~~-----~~~-~V~Fs~pnG~~Las~s~-----D~tiKlWdl~~g~~l~tl~~~-~V--- 236 (485)
..|..+|++ +|+..... .+. .-... +|++++.++. |+.|..+|+++|+++-++... ..
T Consensus 129 alD~~tG~~-----~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~ 201 (571)
T 2ad6_A 129 ALDAKTGKI-----NWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSV 201 (571)
T ss_dssp EEETTTCCE-----EEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHH
T ss_pred EEECCCCCE-----EEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCcccc
Confidence 678788886 45532111 011 11121 6777776553 899999999999998776421 11
Q ss_pred ------------------------------------EEEEEcC-CceEEEEEcCC---------CC----eeEEEEecCC
Q 011452 237 ------------------------------------QEIKISP-GIMLLIFTKAS---------GH----VPLKILSIED 266 (485)
Q Consensus 237 ------------------------------------~~VafSp-g~~ll~sss~~---------~D----~tIklWdi~t 266 (485)
..+++.| .+.+....... .| ..|.-+|.+|
T Consensus 202 ~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~t 281 (571)
T 2ad6_A 202 RLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDT 281 (571)
T ss_dssp TBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTT
T ss_pred ccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCC
Confidence 1356665 34544442210 12 2699999999
Q ss_pred CeEEEEeecCCcc------eeE-EEEE-ecCCC--E-EEEEeCCCcEEEEECCCCeeEEecccCC------------Cce
Q 011452 267 GTVLKSFNHLLHR------NKK-VDFI-EQFNE--K-LLVKQENENLQILDVRNFELTEVSRTEF------------MTP 323 (485)
Q Consensus 267 G~~L~tl~~~~~~------~~~-V~f~-~~~~~--~-lls~s~D~tIkIWDv~tg~~~~~l~gh~------------~~v 323 (485)
|+.+..++...+. ..+ +.+. ..++. + ++.++.++.+.++|.++|+.+-...-.. ..+
T Consensus 282 G~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p 361 (571)
T 2ad6_A 282 GMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTP 361 (571)
T ss_dssp CCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSE
T ss_pred CcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCce
Confidence 9999888732111 112 2221 12343 3 4557789999999999999876542111 011
Q ss_pred ---------------------------EEEEEcCCCcEEEEEe-------------------------------------
Q 011452 324 ---------------------------SAFIFLYENQLFLTFR------------------------------------- 339 (485)
Q Consensus 324 ---------------------------~avaFspdg~llaS~s------------------------------------- 339 (485)
..++|+|+..+|....
T Consensus 362 ~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~ 441 (571)
T 2ad6_A 362 VRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKK 441 (571)
T ss_dssp EECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSC
T ss_pred ecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCC
Confidence 2357888877665542
Q ss_pred -CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 340 -NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 340 -D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
++.|..||.. |+.+-+++.... +.+..+...|.++..++. |+.|..+|..||+++.+++-.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~------~~~~~~~t~gg~v~~g~~-----------dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFA------AWGGTLYTKGGLVWYATL-----------DGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSC------CCSBCEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCCCEEEEecCCCC------ccceeEEECCCEEEEEcC-----------CCeEEEEECCCCCEEEEEeCC
Confidence 4789999995 999888764322 223333344566666765 799999999999999998754
Q ss_pred C
Q 011452 418 N 418 (485)
Q Consensus 418 ~ 418 (485)
.
T Consensus 505 ~ 505 (571)
T 2ad6_A 505 S 505 (571)
T ss_dssp S
T ss_pred C
Confidence 3
No 241
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.99 E-value=6.8e-06 Score=90.60 Aligned_cols=312 Identities=10% Similarity=0.062 Sum_probs=194.0
Q ss_pred eEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEec
Q 011452 98 IIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIR 176 (485)
Q Consensus 98 V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~ 176 (485)
|.+|... +..|..++.++-+..|+.++++........+...|++|+..++|..+|... .+ -+.+++..
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~----~~-------Gl~~~~~~ 243 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATE----GA-------GLFLINPK 243 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEB----SS-------CEEEEETT
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEEC----CC-------CeEEEeCC
Confidence 7888876 555666776555777888777655432222345799999999998776421 11 34445544
Q ss_pred cCCcCcccceeeec-------cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE---------cCCcEEEEE
Q 011452 177 RGKPDAGFALFESE-------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---------SDKNVQEIK 240 (485)
Q Consensus 177 ~G~~~~~~~lf~~~-------~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl---------~~~~V~~Va 240 (485)
.+++. .+... ....+.++..+ ++|.+.+.. .+ -+.+||.++++...-. ....|.+|.
T Consensus 244 ~~~~~----~~~~~~~~~~~l~~~~i~~i~~d-~~g~lWigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 316 (795)
T 4a2l_A 244 TKEIK----NYLHSPSNPKSISSNYIRSLAMD-SQNRLWIGT-FN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIF 316 (795)
T ss_dssp TTEEE----EECCCTTCTTSCSCSBEEEEEEC-TTSCEEEEE-SS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEE
T ss_pred CCeEE----EeecCCCCccccCCCeEEEEEEc-CCCCEEEEe-CC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEE
Confidence 44331 12111 12345677786 688877644 34 5888998888754332 235799999
Q ss_pred EcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeec-------CCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeE
Q 011452 241 ISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH-------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELT 313 (485)
Q Consensus 241 fSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~-------~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~ 313 (485)
..+++.+-++... +-|..++..+++. ..+.. ....|.++.. ..++.|-++..++-|..||..+++..
T Consensus 317 ~D~~g~lWigt~~---~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~--d~~g~lWiGt~~~Gl~~~~~~~~~~~ 390 (795)
T 4a2l_A 317 MDSQGGMWLGTYF---GGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVE--DKDKNLWIGTNDGGLNLYNPITQRFT 390 (795)
T ss_dssp ECTTSCEEEEESS---SCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEE--CTTSCEEEEESSSCEEEECTTTCCEE
T ss_pred EeCCcCEEEEECC---CCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEE--CCCCCEEEEECCCCeEEEcCCCCcEE
Confidence 9986666666432 4688888766543 22321 1123555553 33567888888888999999988765
Q ss_pred Eeccc--------CCCceEEEEEcCCCc-EEEEEeCCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEE
Q 011452 314 EVSRT--------EFMTPSAFIFLYENQ-LFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (485)
Q Consensus 314 ~~l~g--------h~~~v~avaFspdg~-llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~ 383 (485)
..... ....|.+++..++|+ +.+...++-|.++|.+ |+. ..+......-+...|.+++..++|.+.+..
T Consensus 391 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 391 SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp EECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 54322 135799999999999 6665446779999997 554 444311000111238999999999988865
Q ss_pred ecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEE
Q 011452 384 CKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALF 463 (485)
Q Consensus 384 s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~ 463 (485)
. +-|.++|..+++... +....+.. .. ....|.++.
T Consensus 470 ~-------------~Gl~~~~~~~~~~~~-~~~~~~~~--------------------~~-----------~~~~i~~i~ 504 (795)
T 4a2l_A 470 L-------------SALVRFNPEQRSFTT-IEKEKDGT--------------------PV-----------VSKQITTLF 504 (795)
T ss_dssp S-------------SCEEEEETTTTEEEE-CCBCTTCC--------------------BC-----------CCCCEEEEE
T ss_pred c-------------CceeEEeCCCCeEEE-cccccccc--------------------cc-----------CCceEEEEE
Confidence 3 348889998887643 22110000 00 002799999
Q ss_pred EcCCCCEEEEecCCCcE
Q 011452 464 YDEDRNEIYTGNRHGLV 480 (485)
Q Consensus 464 fspDg~~LaSgs~DgtV 480 (485)
.+++|+..+... +|..
T Consensus 505 ~d~~g~lWigt~-~Gl~ 520 (795)
T 4a2l_A 505 RDSHKRLWIGGE-EGLS 520 (795)
T ss_dssp ECTTCCEEEEES-SCEE
T ss_pred ECCCCCEEEEeC-CceE
Confidence 999999877665 5543
No 242
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.99 E-value=6.1e-07 Score=87.60 Aligned_cols=223 Identities=10% Similarity=0.027 Sum_probs=143.2
Q ss_pred cCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEE
Q 011452 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLK 271 (485)
Q Consensus 193 ~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~ 271 (485)
.++..++++ ++|+++++...++.|..||.++. ....+. ......|+|+|++.++++........|-.+|..+|+...
T Consensus 32 ~~pegia~~-~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASA-PDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 467789998 69998888878899999998754 333333 457899999987777766432211246666778888643
Q ss_pred Eeec-CCcceeEEEEEecCCCEEEEEe-CCCcEEEEECCCCee-EE---------ecccCCCceEEEEEcCCCc-EEEEE
Q 011452 272 SFNH-LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNFEL-TE---------VSRTEFMTPSAFIFLYENQ-LFLTF 338 (485)
Q Consensus 272 tl~~-~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~tg~~-~~---------~l~gh~~~v~avaFspdg~-llaS~ 338 (485)
.... .......+++ ..+..+++.. .++.|..+|..+++. +. ...+....++.+ +||++ ++++-
T Consensus 110 ~~~~~~~~~~~g~~~--~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 110 LLTLPDAIFLNGITP--LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEECTTCSCEEEEEE--SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEeCCCccccCcccc--cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 3221 1122234443 2345666654 688999999887532 11 111233456776 88886 55666
Q ss_pred e-CCcEEEEeCC--CcE--EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEE-
Q 011452 339 R-NRTVAVWNFR--GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLA- 412 (485)
Q Consensus 339 s-D~TIklWd~~--G~l--l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~- 412 (485)
+ .++|..++++ |++ ...+..- .. -..+++++||.+.++... .+.|.++|.. |+...
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~-~~-----P~gi~vd~dG~l~va~~~-----------~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQ-TN-----IDDFAFDVEGNLYGATHI-----------YNSVVRIAPD-RSTTII 247 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEES-CC-----CSSEEEBTTCCEEEECBT-----------TCCEEEECTT-CCEEEE
T ss_pred CCCCEEEEEEeCCCCCCCccEEEecc-CC-----CCCeEECCCCCEEEEeCC-----------CCeEEEECCC-CCEEEE
Confidence 6 8899999985 442 2222211 11 357999999998877543 5789999964 77633
Q ss_pred -EecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEc---CCCCEEEEecCC
Q 011452 413 -KIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYD---EDRNEIYTGNRH 477 (485)
Q Consensus 413 -tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fs---pDg~~LaSgs~D 477 (485)
.+... +...++++|. ||++.||-++..
T Consensus 248 ~~~~~~--------------------------------------~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 248 AQAEQG--------------------------------------VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ECGGGT--------------------------------------CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eecccc--------------------------------------cCCceEEEEecccCCCCEEEEECCC
Confidence 22211 1278899999 999888776643
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.99 E-value=2.8e-08 Score=95.42 Aligned_cols=259 Identities=9% Similarity=0.010 Sum_probs=166.8
Q ss_pred ceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEe
Q 011452 97 KIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYI 175 (485)
Q Consensus 97 ~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i 175 (485)
.+..+++. +..|..++.+ +..+|. +|+.+-.... +.....+..+. +|. |..++ .+ ..+..++.
T Consensus 61 ~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~-~~~~~~~~~~~-~~~-l~v~t----~~------~~l~~~d~ 124 (330)
T 3hxj_A 61 IECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDT-KKAIVSDFTIF-EDI-LYVTS----MD------GHLYAINT 124 (330)
T ss_dssp EEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC------CCEEEE-TTE-EEEEC----TT------SEEEEECT
T ss_pred cccceEEecCCcEEEecCc--EEEECC-CCcEEEEEEC-CCCcccCceEE-CCE-EEEEe----cC------CEEEEEcC
Confidence 34555665 5667777766 777786 6776554433 22233344444 554 44433 22 35556664
Q ss_pred ccCCcCcccceeeec-cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEEc
Q 011452 176 RRGKPDAGFALFESE-SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFTK 252 (485)
Q Consensus 176 ~~G~~~~~~~lf~~~-~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~sss 252 (485)
. |+. ++... ....+..+.++ ++|.+++ ++.++.+..+|.+ |+.+..+. ...+.++.+.+++.+.++.
T Consensus 125 ~-g~~-----~~~~~~~~~~~~~~~~~-~~g~l~v-gt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t- 194 (330)
T 3hxj_A 125 D-GTE-----KWRFKTKKAIYATPIVS-EDGTIYV-GSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS- 194 (330)
T ss_dssp T-SCE-----EEEEECSSCCCSCCEEC-TTSCEEE-ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES-
T ss_pred C-CCE-----EEEEcCCCceeeeeEEc-CCCEEEE-EcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe-
Confidence 4 654 33331 11122345665 5787655 5678999999998 88765554 4567778887666666653
Q ss_pred CCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCC
Q 011452 253 ASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN 332 (485)
Q Consensus 253 ~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg 332 (485)
..|..+| .+|+.+..+......+..+.+. + ++.|.++..++.|..+|. +++.+.........+.++++.++|
T Consensus 195 ----~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~-~-~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g 266 (330)
T 3hxj_A 195 ----DKVYAIN-PDGTEKWNFYAGYWTVTRPAIS-E-DGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD 266 (330)
T ss_dssp ----SSEEEEC-TTSCEEEEECCSSCCCSCCEEC-T-TSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS
T ss_pred ----CEEEEEC-CCCcEEEEEccCCcceeceEEC-C-CCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC
Confidence 4789999 8999988877544456666653 2 457888888888888885 565555554444445566777789
Q ss_pred cEEEEEeCCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC
Q 011452 333 QLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 333 ~llaS~sD~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
.+.+...++.|..+|.+|+.+..+.-.... +.++++.++|++.+... +|.+++-..+
T Consensus 267 ~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~-----~~~~~~d~~g~l~~gt~------------~G~~~~~~~~ 323 (330)
T 3hxj_A 267 TIYFGSYDGHLYAINPDGTEKWNFETGSWI-----IATPVIDENGTIYFGTR------------NGKFYALFNL 323 (330)
T ss_dssp CEEEECTTCEEEEECTTSCEEEEEECSSCC-----CSCCEECTTCCEEEECT------------TSCEEEEEC-
T ss_pred eEEEecCCCCEEEECCCCcEEEEEEcCCcc-----ccceEEcCCCEEEEEcC------------CCeEEEEecc
Confidence 887766688899999889988777643332 77899999999888543 6899887654
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.98 E-value=3.2e-07 Score=90.77 Aligned_cols=194 Identities=11% Similarity=0.016 Sum_probs=140.7
Q ss_pred ceEEEEeCCCCeEEEEeeC--CCcEEEeecCCCeEEEEEc-C--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeE
Q 011452 195 PGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSIS-D--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTV 269 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~--D~tiKlWdl~~g~~l~tl~-~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~ 269 (485)
+..++|+ +||.+.++.+. +++|.+.|+++|+.+.++. + .....+++.. +.+.++.. .++++-++|.+++++
T Consensus 23 ~~Gl~~~-~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~--~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYA-ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVW--LKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEEC-STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEET--TCSEEEEEETTTTEE
T ss_pred cccEEEe-CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEe--cCCEEEEEECCCCcE
Confidence 3478997 67888887764 6899999999999998875 2 2445677774 45555543 347999999999999
Q ss_pred EEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecc-c----CCCceEEEEEcCCCcEEEEEe-CCcE
Q 011452 270 LKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR-T----EFMTPSAFIFLYENQLFLTFR-NRTV 343 (485)
Q Consensus 270 L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~-g----h~~~v~avaFspdg~llaS~s-D~TI 343 (485)
+.++..-...-+.++ +++++|.++..+++|.++|.++.+.+..+. + ....++.+.|. +|+++++.. +++|
T Consensus 99 ~~~i~~g~~~g~glt---~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 99 IKNFTHQMKDGWGLA---TDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEECCSSSCCEEE---ECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEECCCCCeEEEE---ECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 999973212223333 578888888778999999999988766653 1 11247888888 889988887 8899
Q ss_pred EEEeCC-CcEEEEeecCC--------CCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC
Q 011452 344 AVWNFR-GELVTSFEDHL--------LWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL 406 (485)
Q Consensus 344 klWd~~-G~ll~tl~gH~--------~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~ 406 (485)
.+=|.. |+.+.++.-.. ........+.|+|+|+|+.|..+++ ..+++..-++.
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk----------~~~~v~~i~l~ 236 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK----------LWPKLFEIKLH 236 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET----------TCSEEEEEEEE
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC----------CCCeEEEEEEe
Confidence 999995 99999886321 0001123689999999988887775 24666655544
No 245
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.97 E-value=1.2e-06 Score=94.86 Aligned_cols=281 Identities=14% Similarity=0.092 Sum_probs=167.0
Q ss_pred ecCEEEEEeCCCeEEeeecccCcEEEEeecCCcc--------cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEe
Q 011452 104 ARDIVFALAQSGVCAAFCRETNQRICFLNVTADE--------VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYI 175 (485)
Q Consensus 104 s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~--------~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i 175 (485)
.++.|+.++.++.+..+|.+||+.+=........ .-+++++ .+..|+.++. + ..+.-.|.
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~----d------g~l~AlD~ 134 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTL----D------ASVVALNK 134 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEET----T------TEEEEEES
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeC----C------CEEEEEEC
Confidence 4677777777444889999999987665442111 0133444 3455655442 2 25555677
Q ss_pred ccCCcCcccceeeecccc----C-ce-E-EEEe-CCCCe-EEEEee------CCCcEEEeecCCCeEEEEEcCCc--E--
Q 011452 176 RRGKPDAGFALFESESLK----W-PG-F-VEFD-DVNGK-VLTYSA------QDSIYKVFDLKNYTMLYSISDKN--V-- 236 (485)
Q Consensus 176 ~~G~~~~~~~lf~~~~~~----~-~~-~-V~Fs-~pnG~-~Las~s------~D~tiKlWdl~~g~~l~tl~~~~--V-- 236 (485)
.+|++ +|+..... + +. . +... ..+|+ +|..++ .++.|.-+|+++|+++-+.+... +
T Consensus 135 ~TG~~-----~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p 209 (582)
T 1flg_A 135 NTGKV-----VWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGR 209 (582)
T ss_dssp SSCCE-----EEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEE
T ss_pred CCCCE-----EeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCcccccc
Confidence 78886 45532110 0 00 1 2232 12344 333333 38999999999999987764311 1
Q ss_pred ---------------------------------------EEEEEcC-CceEEEEEcC-----------CC------C---
Q 011452 237 ---------------------------------------QEIKISP-GIMLLIFTKA-----------SG------H--- 256 (485)
Q Consensus 237 ---------------------------------------~~VafSp-g~~ll~sss~-----------~~------D--- 256 (485)
...++.| .+++.+.... .. |
T Consensus 210 ~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~ 289 (582)
T 1flg_A 210 LNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLY 289 (582)
T ss_dssp ETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTT
T ss_pred ccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcc
Confidence 1245665 4555544321 11 2
Q ss_pred -eeEEEEecCCCeEEEEeecCCcc------ee-EEEEEe--cCCC---EEEEEeCCCcEEEEECCCCeeEEecccCC--C
Q 011452 257 -VPLKILSIEDGTVLKSFNHLLHR------NK-KVDFIE--QFNE---KLLVKQENENLQILDVRNFELTEVSRTEF--M 321 (485)
Q Consensus 257 -~tIklWdi~tG~~L~tl~~~~~~------~~-~V~f~~--~~~~---~lls~s~D~tIkIWDv~tg~~~~~l~gh~--~ 321 (485)
..|.-+|.+||+.+-.++...+. .. .+.+.. .+++ .++.++.|+.+.++|.++|+++-...-.. .
T Consensus 290 ~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 290 TSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp CSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred cceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 58999999999999988631111 11 222221 2443 45557899999999999999875432221 0
Q ss_pred ce-------------------------------------------EEEEEcCCCcEEEEE--------------------
Q 011452 322 TP-------------------------------------------SAFIFLYENQLFLTF-------------------- 338 (485)
Q Consensus 322 ~v-------------------------------------------~avaFspdg~llaS~-------------------- 338 (485)
+. ..++|+|+..++...
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 134567765554332
Q ss_pred -------------e-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEE
Q 011452 339 -------------R-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINIS 403 (485)
Q Consensus 339 -------------s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklW 403 (485)
. +++|..||.. |+.+-+...+... ++-.+...|.+++.++. |+.++.+
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~------~~g~~~tagglvf~g~~-----------dg~l~A~ 512 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPL------WAGVLATAGNLVFTGTG-----------DGYFKAF 512 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCC------CSCCEEETTTEEEEECT-----------TSEEEEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCC------cccceEeCCCEEEEECC-----------CCcEEEE
Confidence 1 5789999995 9988777644322 22222234667777876 7999999
Q ss_pred eCCCCeEEEEecCCC
Q 011452 404 NILTGKCLAKIRASN 418 (485)
Q Consensus 404 dl~TGk~l~tl~gH~ 418 (485)
|..||+.|.+++...
T Consensus 513 D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 513 DAKSGKELWKFQTGS 527 (582)
T ss_dssp ETTTCCEEEEEECSS
T ss_pred ECCCCCEEEEecCCC
Confidence 999999999987644
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=3.6e-08 Score=107.54 Aligned_cols=262 Identities=11% Similarity=0.111 Sum_probs=172.1
Q ss_pred EEEEeCCCeEEeeecccCcEEEEeec--------------------------------------CCcccEEEEEEee---
Q 011452 108 VFALAQSGVCAAFCRETNQRICFLNV--------------------------------------TADEVIRSLFYNK--- 146 (485)
Q Consensus 108 ias~s~dgtiklW~~~tG~~l~tl~g--------------------------------------~~~~~i~sv~~sp--- 146 (485)
+.|++++|.++++-+.++++|..+.- ...+-..-+..|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 67899999999999998888775311 0011122255555
Q ss_pred --CCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeC-CCCeEEEEee-----------
Q 011452 147 --NNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDD-VNGKVLTYSA----------- 212 (485)
Q Consensus 147 --dg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~-pnG~~Las~s----------- 212 (485)
||++|.. .+...+ .+-+-|+.+.++++ +.+--....+..++|.. |||+++..++
T Consensus 98 ~~DG~~lfV--nd~~~~-------rVavIdl~t~~~~~---ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 98 KYDGRFLFM--NDKANT-------RVARVRCDVMKCDA---ILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEEEEE--EETTTT-------EEEEEETTTTEEEE---EEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred CcCCCEEEE--EcCCCC-------EEEEEECCCceEee---EEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 8887766 223233 44444666555432 12211112244667754 7888876663
Q ss_pred -------CCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEEcCCC--------------C--------------
Q 011452 213 -------QDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIMLLIFTKASG--------------H-------------- 256 (485)
Q Consensus 213 -------~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~ll~sss~~~--------------D-------------- 256 (485)
.++++-+.|.++.+.+.++. +.+-..+++||++.++..++... |
T Consensus 166 ~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v 245 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI 245 (595)
T ss_dssp STTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred ccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEec
Confidence 35689999999999888886 33445688998666666555433 1
Q ss_pred --------eeEEEEecCC--CeE-EEEeecCCcceeEEEEEecCCCEEEEEe-CCCcEEEEECCCCe------------e
Q 011452 257 --------VPLKILSIED--GTV-LKSFNHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNFE------------L 312 (485)
Q Consensus 257 --------~tIklWdi~t--G~~-L~tl~~~~~~~~~V~f~~~~~~~lls~s-~D~tIkIWDv~tg~------------~ 312 (485)
+.|.+.|..+ |+. +.++.-- ..-..|.|+ |||.++++++ .+.+|-++|+.+.+ .
T Consensus 246 ~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~s-PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 246 AAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMA-PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp HHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEEC-TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred cCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEc-CCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 2588999988 766 6666521 223478885 8898888875 89999999999763 2
Q ss_pred EEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-----------CcEEEEeecCCCC-CCCCCeeEEEECCCCCE
Q 011452 313 TEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-----------GELVTSFEDHLLW-HPDCNTNNIYITSDQDL 379 (485)
Q Consensus 313 ~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-----------G~ll~tl~gH~~~-~~~~~v~svafSpDG~~ 379 (485)
..... -...++-++|+|||...++.- |.+|-+||++ .+.+.++.-|... | .+.-..+.++|||++
T Consensus 324 ~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh-~~~~~g~t~~~DGk~ 401 (595)
T 1fwx_A 324 VAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGH-LKTVMGETLDATNDW 401 (595)
T ss_dssp EECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEE-EEETTTTSTTCCSSE
T ss_pred EEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccccc-ceeccceEeCCCCCE
Confidence 22221 123689999999996666666 9999999984 3578888876431 1 000134567999999
Q ss_pred EEEEec
Q 011452 380 IISYCK 385 (485)
Q Consensus 380 LaS~s~ 385 (485)
|++.++
T Consensus 402 l~~~Nk 407 (595)
T 1fwx_A 402 LVCLSK 407 (595)
T ss_dssp EEEEES
T ss_pred EEEcCC
Confidence 999987
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=1.2e-07 Score=104.05 Aligned_cols=244 Identities=13% Similarity=0.092 Sum_probs=153.0
Q ss_pred EEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCC---cEEEEEEcC---CceEEEEEcCC---CCeeEEEEecCCCe
Q 011452 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK---NVQEIKISP---GIMLLIFTKAS---GHVPLKILSIEDGT 268 (485)
Q Consensus 198 V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~---~V~~VafSp---g~~ll~sss~~---~D~tIklWdi~tG~ 268 (485)
+++. +++++ .++.|+.+..+|.++|+.+-+.... ....+.-+| ++.+++..+.. .++.|..+|.+||+
T Consensus 113 ~~~~--~~~v~-v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~ 189 (668)
T 1kv9_A 113 VALW--GDKVY-VGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGK 189 (668)
T ss_dssp CEEE--BTEEE-EECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred eEEE--CCEEE-EEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCc
Confidence 4553 45554 4567999999999999998776421 111122223 56666543321 25799999999999
Q ss_pred EEEEeecC--C----------------------------ccee-EEEEEecCCCEEEEEeCCC-----------------
Q 011452 269 VLKSFNHL--L----------------------------HRNK-KVDFIEQFNEKLLVKQENE----------------- 300 (485)
Q Consensus 269 ~L~tl~~~--~----------------------------~~~~-~V~f~~~~~~~lls~s~D~----------------- 300 (485)
++.++... . +.++ .+++. +.++.+.++..++
T Consensus 190 ~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d-~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~ 268 (668)
T 1kv9_A 190 LAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYD-PELDLLYVGTGNGSPWNREVRSPGGGDNLY 268 (668)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred EEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEc-CCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 99988521 0 0111 35664 4567777776555
Q ss_pred --cEEEEECCCCeeEEeccc--CC-------CceEEEEEcCCCc---EEEEEe-CCcEEEEeCC-CcEEEEeecCC-CCC
Q 011452 301 --NLQILDVRNFELTEVSRT--EF-------MTPSAFIFLYENQ---LFLTFR-NRTVAVWNFR-GELVTSFEDHL-LWH 363 (485)
Q Consensus 301 --tIkIWDv~tg~~~~~l~g--h~-------~~v~avaFspdg~---llaS~s-D~TIklWd~~-G~ll~tl~gH~-~~~ 363 (485)
.|.-+|++||+.+-.... |. ..+....+..||+ .++.++ ++.+.++|.+ |+++....-.. .|.
T Consensus 269 ~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 348 (668)
T 1kv9_A 269 LSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWA 348 (668)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSE
T ss_pred eeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccc
Confidence 499999999998766532 32 1222233445786 677888 9999999995 99985443221 110
Q ss_pred C-----------------CC-------------CeeEEEECCCCCEEEEEecCCC-----C------------C------
Q 011452 364 P-----------------DC-------------NTNNIYITSDQDLIISYCKADS-----D------------D------ 390 (485)
Q Consensus 364 ~-----------------~~-------------~v~svafSpDG~~LaS~s~d~~-----~------------d------ 390 (485)
. .. +-..++|+|+..++.....+-. . .
T Consensus 349 ~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (668)
T 1kv9_A 349 EKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADA 428 (668)
T ss_dssp EEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGC
T ss_pred cccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCcccccc
Confidence 0 00 0013788898777664322000 0 0
Q ss_pred -CC-CcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCC
Q 011452 391 -PL-AEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDR 468 (485)
Q Consensus 391 -~~-~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg 468 (485)
.. ....+|+|.-||+.||+.+.++..+. .+....+...|
T Consensus 429 ~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~---------------------------------------~~~~~~~~t~g 469 (668)
T 1kv9_A 429 TDVPAAVVSGALLAWDPVKQKAAWKVPYPT---------------------------------------HWNGGTLSTAG 469 (668)
T ss_dssp CCCCGGGCEEEEEEEETTTTEEEEEEEESS---------------------------------------SCCCCEEEETT
T ss_pred CCCCCCCccceEEEEeCCCCcEEEEccCCC---------------------------------------CCcCceeEeCC
Confidence 00 11245899999999999998886543 22233445578
Q ss_pred CEEEEecCCCcEEEcc
Q 011452 469 NEIYTGNRHGLVHVWS 484 (485)
Q Consensus 469 ~~LaSgs~DgtVklWd 484 (485)
..|+.|+.|+.|++||
T Consensus 470 g~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 470 NLVFQGTAAGQMHAYS 485 (668)
T ss_dssp TEEEEECTTSEEEEEE
T ss_pred CEEEEECCcccchhhh
Confidence 8899999999999997
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.93 E-value=5.9e-07 Score=97.96 Aligned_cols=281 Identities=13% Similarity=0.097 Sum_probs=173.4
Q ss_pred ecCEEEEEeC-CCeEEeeec-ccCcEEEEeecCCc----------ccEEEEEEeeCCCE----EEEEEeecCCCCcccce
Q 011452 104 ARDIVFALAQ-SGVCAAFCR-ETNQRICFLNVTAD----------EVIRSLFYNKNNDS----LITVSVYASDNFSSLRC 167 (485)
Q Consensus 104 s~~~ias~s~-dgtiklW~~-~tG~~l~tl~g~~~----------~~i~sv~~spdg~~----Las~S~d~~~d~stL~~ 167 (485)
.+++|+.++. ++.+..+|. +||+.+=....... ...+.++++|.+.. |+.++. +
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~----d------ 130 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL----D------ 130 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT----T------
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC----C------
Confidence 4788888888 899999999 89998865543211 12356788765555 665442 2
Q ss_pred eEEEEeEeccCCcCcccceeeecccc-----Cce-EEEEeCCCCeEEEEee-----CCCcEEEeecCCCeEEEEEcCC-c
Q 011452 168 RSTRIEYIRRGKPDAGFALFESESLK-----WPG-FVEFDDVNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISDK-N 235 (485)
Q Consensus 168 ~t~~lw~i~~G~~~~~~~lf~~~~~~-----~~~-~V~Fs~pnG~~Las~s-----~D~tiKlWdl~~g~~l~tl~~~-~ 235 (485)
..+.-.|..+|++ +|+..... .+. .-.. .+|++++.++ .|+.|.-+|+++|+++-.+... .
T Consensus 131 g~l~AlDa~TG~~-----~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 131 GNVAALNAETGET-----VWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp SEEEEEETTTCCE-----EEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred CEEEEEECCCCCE-----EEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 3555567788886 55542111 011 1112 1677776554 4899999999999998776421 1
Q ss_pred --------------------------------------EE-EEEEcC-CceEEEEEcCC---------C----CeeEEEE
Q 011452 236 --------------------------------------VQ-EIKISP-GIMLLIFTKAS---------G----HVPLKIL 262 (485)
Q Consensus 236 --------------------------------------V~-~VafSp-g~~ll~sss~~---------~----D~tIklW 262 (485)
+| ..++.| .+++.+..+.. . ...|.-+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 11 245554 44444442211 0 1479999
Q ss_pred ecCCCeEEEEeecCCccee-------EEEEE-e-cCCC--EEEE-EeCCCcEEEEECCCCeeEEecccC-----------
Q 011452 263 SIEDGTVLKSFNHLLHRNK-------KVDFI-E-QFNE--KLLV-KQENENLQILDVRNFELTEVSRTE----------- 319 (485)
Q Consensus 263 di~tG~~L~tl~~~~~~~~-------~V~f~-~-~~~~--~lls-~s~D~tIkIWDv~tg~~~~~l~gh----------- 319 (485)
|.+||+.+-.++...+..+ .+.+- . .+++ .+++ ++.++.+.+.|.+||+++-...-.
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~ 363 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDL 363 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT
T ss_pred eCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccccc
Confidence 9999999988874322221 12221 1 2342 4444 679999999999999987543210
Q ss_pred -CCce---------------------------EEEEEcCCCcEEEEE---------------------------------
Q 011452 320 -FMTP---------------------------SAFIFLYENQLFLTF--------------------------------- 338 (485)
Q Consensus 320 -~~~v---------------------------~avaFspdg~llaS~--------------------------------- 338 (485)
...+ ...+|+|+.++|...
T Consensus 364 ~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~ 443 (599)
T 1w6s_A 364 KTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPK 443 (599)
T ss_dssp TTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTT
T ss_pred CCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCc
Confidence 0010 235677777766442
Q ss_pred -------eCCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 339 -------RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 339 -------sD~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
.++.|..||.. |+.+-+.+-.. . +++-.++..|.++..++. |+.++.+|..||++
T Consensus 444 ~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~-----~~~g~~~tagg~vf~gt~-----------dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 444 GDRQNYEGLGQIKAYNAITGDYKWEKMERF-A-----VWGGTMATAGDLVFYGTL-----------DGYLKARDSDTGDL 506 (599)
T ss_dssp SBTTTTBCCEEEEEECTTTCCEEEEEEESS-C-----CCSBCEEETTTEEEEECT-----------TSEEEEEETTTCCE
T ss_pred CCcccCCCcCeEEEEECCCCCEEeEecCCC-C-----ccCcceEecCCEEEEECC-----------CCeEEEEECCCCCE
Confidence 13689999995 99887765221 1 111122335667777775 79999999999999
Q ss_pred EEEecCCC
Q 011452 411 LAKIRASN 418 (485)
Q Consensus 411 l~tl~gH~ 418 (485)
|.+++-..
T Consensus 507 lW~~~l~~ 514 (599)
T 1w6s_A 507 LWKFKIPS 514 (599)
T ss_dssp EEEEECSS
T ss_pred EEEeeCCC
Confidence 99986543
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.89 E-value=2.8e-07 Score=91.19 Aligned_cols=205 Identities=13% Similarity=0.130 Sum_probs=138.2
Q ss_pred CeEEEEEc-C--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCccee--EEEEEecCCCEEEEEe-C
Q 011452 225 YTMLYSIS-D--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNK--KVDFIEQFNEKLLVKQ-E 298 (485)
Q Consensus 225 g~~l~tl~-~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~--~V~f~~~~~~~lls~s-~ 298 (485)
++.+.+++ + ...+.+.|+ ++.|..+.+..+...|+..|++||+.++++.-. ...+ .+++ ++++|.... .
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~---~g~~ly~ltw~ 105 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISD---WKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEE---ETTEEEEEESS
T ss_pred eEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEE---eCCEEEEEEee
Confidence 35566665 2 358999999 557777766555579999999999999998732 3333 3554 367777764 7
Q ss_pred CCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCC
Q 011452 299 NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSD 376 (485)
Q Consensus 299 D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpD 376 (485)
++.+-++|.++.+.+.++.-.. .-+.+ ++|++.|..+. +++|.++|.+ .+.+.+++--....+-..+|.+.+. |
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~-eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDG-EGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSS-CCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECccCcEEEEEECCC-CceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 8999999999999998875322 22344 46777666665 7889999996 8888876542211111125677776 8
Q ss_pred CCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhccc
Q 011452 377 QDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEAL 456 (485)
Q Consensus 377 G~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 456 (485)
|++.|..-. +++|-+-|..||+.+.+|.-..-. ..+.. .....
T Consensus 182 G~lyan~w~-----------~~~I~vIDp~tG~V~~~Id~~~L~---~~~~~-----------------------~~~~~ 224 (262)
T 3nol_A 182 GEIFANVWQ-----------TNKIVRIDPETGKVTGIIDLNGIL---AEAGP-----------------------LPSPI 224 (262)
T ss_dssp TEEEEEETT-----------SSEEEEECTTTCBEEEEEECTTGG---GGSCS-----------------------CCSSC
T ss_pred CEEEEEEcc-----------CCeEEEEECCCCcEEEEEECCcCc---ccccc-----------------------ccCcC
Confidence 876665433 579999999999999999764200 00000 00001
Q ss_pred CCeEEEEEcCCCCEEEEec
Q 011452 457 EDITALFYDEDRNEIYTGN 475 (485)
Q Consensus 457 ~~V~sl~fspDg~~LaSgs 475 (485)
.--..+||+|+++.|+-.+
T Consensus 225 ~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 225 DVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEEcCCCCEEEEEC
Confidence 2567899999998877665
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.88 E-value=7.4e-08 Score=105.04 Aligned_cols=195 Identities=12% Similarity=0.006 Sum_probs=138.0
Q ss_pred CCeEEEEe-eCCCcEEEeecCCCeEEE--EEc-CCcEEEEEE-c-CCceEEEEEc----------------CCCCeeEEE
Q 011452 204 NGKVLTYS-AQDSIYKVFDLKNYTMLY--SIS-DKNVQEIKI-S-PGIMLLIFTK----------------ASGHVPLKI 261 (485)
Q Consensus 204 nG~~Las~-s~D~tiKlWdl~~g~~l~--tl~-~~~V~~Vaf-S-pg~~ll~sss----------------~~~D~tIkl 261 (485)
||++|--. ..+..|-+-|+++.++.. ++. +.....++| + |++..+..+. ...+.++.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 56665444 456679999999999887 554 467889998 5 7555554442 133479999
Q ss_pred EecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCC--------------------------------------cEE
Q 011452 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENE--------------------------------------NLQ 303 (485)
Q Consensus 262 Wdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~--------------------------------------tIk 303 (485)
.|.++.+.+.++.-- +.-.-++++ +++..+.+++++. .|.
T Consensus 180 ID~~t~~v~~qI~Vg-g~pd~~~~s-pdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVS-GNLDNCDAD-YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEES-SCCCCEEEC-SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeC-CCccceEEC-CCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 999999999988721 122356664 6777777776442 589
Q ss_pred EEECCC--Cee-EEecccCCCceEEEEEcCCCcEEEEEe--CCcEEEEeCC-Cc------------EEEEeecCCCCCCC
Q 011452 304 ILDVRN--FEL-TEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GE------------LVTSFEDHLLWHPD 365 (485)
Q Consensus 304 IWDv~t--g~~-~~~l~gh~~~v~avaFspdg~llaS~s--D~TIklWd~~-G~------------ll~tl~gH~~~~~~ 365 (485)
+.|.++ ++. +..+.- ...+..+.|+|||++++.+. +.+|.++|++ .+ .+...+--..
T Consensus 258 VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g---- 332 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG---- 332 (595)
T ss_dssp EEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC----
T ss_pred EEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC----
Confidence 999998 544 333321 13567799999999887776 9999999996 32 3444432222
Q ss_pred CCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC----------CeEEEEecCCC
Q 011452 366 CNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILT----------GKCLAKIRASN 418 (485)
Q Consensus 366 ~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T----------Gk~l~tl~gH~ 418 (485)
-+.++|+||| .+-+... -|++|-.||+.+ .+.+.++.-|.
T Consensus 333 --P~h~aF~~dG-~aY~t~~----------ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~y 382 (595)
T 1fwx_A 333 --PLHTAFDGRG-NAYTSLF----------LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHY 382 (595)
T ss_dssp --EEEEEECTTS-EEEEEET----------TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSS
T ss_pred --cceEEECCCC-eEEEEEe----------cCCcEEEEEhhHhhhhhcccccceeEEEeeccc
Confidence 5789999999 6655554 379999999988 67888988775
No 251
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=2.3e-05 Score=86.17 Aligned_cols=314 Identities=14% Similarity=0.069 Sum_probs=191.5
Q ss_pred ccceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEee-------------cCCcccEEEEEEeeCCCEEEEEEeecCC
Q 011452 95 RSKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLN-------------VTADEVIRSLFYNKNNDSLITVSVYASD 160 (485)
Q Consensus 95 ~s~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~-------------g~~~~~i~sv~~spdg~~Las~S~d~~~ 160 (485)
...|.+|... ...|..++..+-+..++..+++...... +-+...|++|+..++|...+. +.
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWig-t~---- 331 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIG-TW---- 331 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEE-EB----
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEE-ec----
Confidence 4568899887 5567777774556677877665432211 113457999999999987654 21
Q ss_pred CCcccceeEEEEeEeccCCcCcccceeee---------ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEE--
Q 011452 161 NFSSLRCRSTRIEYIRRGKPDAGFALFES---------ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-- 229 (485)
Q Consensus 161 d~stL~~~t~~lw~i~~G~~~~~~~lf~~---------~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~-- 229 (485)
+ .-+..++...+.+ ..+.. .....+.++..+ .+|.+.+ |..++-+.++|..+++...
T Consensus 332 ~------~Gl~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~v~~i~~d-~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~ 399 (781)
T 3v9f_A 332 G------GGINFISNAPPTF----HTWSYSPTQMNESSLSNKVVSSVCDD-GQGKLWI-GTDGGGINVFENGKRVAIYNK 399 (781)
T ss_dssp S------SCEEEECSSCCSC----EEEC----CCCSSCCSSSCEEEEEEC-TTSCEEE-EEBSSCEEEEETTEEEEECC-
T ss_pred C------CeEEEeCCCCCcc----eeeccCccccccCCCCCcceEEEEEc-CCCCEEE-EeCCCcEEEEECCCCeEEEcc
Confidence 1 1333444333332 11110 012345677776 6787765 4445557788877655332
Q ss_pred ---EEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeec---CCcceeEEEEEecCCCEEEEEeCCCcEE
Q 011452 230 ---SISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH---LLHRNKKVDFIEQFNEKLLVKQENENLQ 303 (485)
Q Consensus 230 ---tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~---~~~~~~~V~f~~~~~~~lls~s~D~tIk 303 (485)
.+....|.++...+++.+.++.. ++-|..+|.++|+.. .+.. ....+.++.. ..++.|.++.. +-|.
T Consensus 400 ~~~~~~~~~v~~i~~d~~g~lWigt~---~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~--d~~g~lwigt~-~Gl~ 472 (781)
T 3v9f_A 400 ENRELLSNSVLCSLKDSEGNLWFGTY---LGNISYYNTRLKKFQ-IIELEKNELLDVRVFYE--DKNKKIWIGTH-AGVF 472 (781)
T ss_dssp ----CCCSBEEEEEECTTSCEEEEET---TEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEE--CTTSEEEEEET-TEEE
T ss_pred CCCCCCCcceEEEEECCCCCEEEEec---cCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEE--CCCCCEEEEEC-CceE
Confidence 23346899999987666666532 257888998887653 3321 1234555553 23567777766 5688
Q ss_pred EEECCCCeeEEecccC-----CCceEEEEEcCCCcEEEEEeCCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCC
Q 011452 304 ILDVRNFELTEVSRTE-----FMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQD 378 (485)
Q Consensus 304 IWDv~tg~~~~~l~gh-----~~~v~avaFspdg~llaS~sD~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~ 378 (485)
++|..+++........ ...|.+++..++|++.+...++-+-.+|.+++.+..+...... +...|.+|+..++|.
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l-~~~~i~~i~~d~~g~ 551 (781)
T 3v9f_A 473 VIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGF-CSNTINQIYRSSKGQ 551 (781)
T ss_dssp EEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTC-SCSCEEEEEECTTSC
T ss_pred EEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCC-CCCeeEEEEECCCCC
Confidence 9999988765443222 4679999999999999877733466788875555555432111 223489999999999
Q ss_pred EEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCC
Q 011452 379 LIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALED 458 (485)
Q Consensus 379 ~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 458 (485)
+.++.. .|-|..+|..+++. ..+...++.+ . ..
T Consensus 552 lWi~T~------------~Glv~~~d~~~~~~-~~~~~~~gl~------------------------~----------~~ 584 (781)
T 3v9f_A 552 MWLATG------------EGLVCFPSARNFDY-QVFQRKEGLP------------------------N----------TH 584 (781)
T ss_dssp EEEEET------------TEEEEESCTTTCCC-EEECGGGTCS------------------------C----------CC
T ss_pred EEEEEC------------CCceEEECCCCCcE-EEccccCCCC------------------------C----------ce
Confidence 888753 36558899887763 3343222100 0 25
Q ss_pred eEEEEEcCCCCEEEEecCCCcEE
Q 011452 459 ITALFYDEDRNEIYTGNRHGLVH 481 (485)
Q Consensus 459 V~sl~fspDg~~LaSgs~DgtVk 481 (485)
|.+++.+++|+..+++ .+|.++
T Consensus 585 i~~i~~d~~g~lW~~t-~~Gl~~ 606 (781)
T 3v9f_A 585 IRAISEDKNGNIWAST-NTGISC 606 (781)
T ss_dssp CCEEEECSSSCEEEEC-SSCEEE
T ss_pred EEEEEECCCCCEEEEc-CCceEE
Confidence 7788888888877665 445443
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.85 E-value=2.8e-07 Score=91.15 Aligned_cols=179 Identities=13% Similarity=0.105 Sum_probs=132.3
Q ss_pred EEEEeCCCCeEEEEeeCCC--cEEEeecCCCeEEEEEc-CCcE--EEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEE
Q 011452 197 FVEFDDVNGKVLTYSAQDS--IYKVFDLKNYTMLYSIS-DKNV--QEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLK 271 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D~--tiKlWdl~~g~~l~tl~-~~~V--~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~ 271 (485)
.++|+ +|.+..|.+.++ .|++.|+++|+.+.++. +... ..|++..+ .+....- .++.+-++|.+|++++.
T Consensus 47 GL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~-~ly~ltw--~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 47 GFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKD-KIVGLTW--KNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETT-EEEEEES--SSSEEEEEETTTCCEEE
T ss_pred eEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCC-EEEEEEe--eCCEEEEEECccCcEEE
Confidence 57897 688899988876 99999999999988875 3333 34666544 4444433 34799999999999999
Q ss_pred EeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc----CC-CceEEEEEcCCCcEEEEEe-CCcEEE
Q 011452 272 SFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT----EF-MTPSAFIFLYENQLFLTFR-NRTVAV 345 (485)
Q Consensus 272 tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g----h~-~~v~avaFspdg~llaS~s-D~TIkl 345 (485)
+++.- ..-+.++ ++++.|.++..+.+|.++|.+|.+.+..+.- +. ..++.+.+. +|+++|... +.+|.+
T Consensus 122 ti~~~-~eG~glt---~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 122 SFNYD-GEGWGLT---HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEECS-SCCCCEE---ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEECC-CCceEEe---cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 99842 2224555 4577888876688999999999887766432 22 345666776 899998887 889999
Q ss_pred EeCC-CcEEEEeecCCCC-------CCCCCeeEEEECCCCCEEEEEec
Q 011452 346 WNFR-GELVTSFEDHLLW-------HPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 346 Wd~~-G~ll~tl~gH~~~-------~~~~~v~svafSpDG~~LaS~s~ 385 (485)
-|.+ |+.+.+++-..+. ......|.||++|+++.|...++
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 9995 9999988754221 11234699999999998888775
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.82 E-value=2e-06 Score=84.13 Aligned_cols=174 Identities=14% Similarity=0.095 Sum_probs=121.0
Q ss_pred CCeEEEEEc---CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCccee--EEEEEecCCCEEEEE-e
Q 011452 224 NYTMLYSIS---DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNK--KVDFIEQFNEKLLVK-Q 297 (485)
Q Consensus 224 ~g~~l~tl~---~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~--~V~f~~~~~~~lls~-s 297 (485)
+++.+.+++ ...++.+.|+++ .|..+....+...|+..|+++|+.+++..-. ...+ .+++ ++++|... -
T Consensus 8 ~~~v~~~~phd~~~ftqGL~~~~~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~---~~~~ly~ltw 82 (243)
T 3mbr_X 8 GYRVVKRYPHDTTAFTEGLFYLRG-HLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVA---WRDRLIQLTW 82 (243)
T ss_dssp CEEEEEEEECCTTCCEEEEEEETT-EEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEE---ETTEEEEEES
T ss_pred ceEEEEEcCCCCccccccEEEECC-EEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEE---eCCEEEEEEe
Confidence 345566664 247999999984 5656655544579999999999999988632 2333 4454 36777665 4
Q ss_pred CCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECC
Q 011452 298 ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS 375 (485)
Q Consensus 298 ~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSp 375 (485)
.++.+.++|.++.+.+.++... ..-+.+ .+|++.|..+. +++|.++|.+ .+.+.+++-.....+-..+|.+.+.
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~-~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~- 158 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYP-GEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV- 158 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECS-SCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred eCCEEEEEECCcCcEEEEEeCC-CCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-
Confidence 8999999999999999988543 334555 46666555555 8899999995 8888877643211111125666654
Q ss_pred CCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 376 DQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 376 DG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
+|++.|-.-. +..|-+-|..||+.+.+|.-.
T Consensus 159 ~G~lyanvw~-----------s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 159 NGELLANVWL-----------TSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp TTEEEEEETT-----------TTEEEEECTTTCBEEEEEECG
T ss_pred CCEEEEEECC-----------CCeEEEEECCCCCEEEEEECC
Confidence 7776654433 578999999999999999754
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.80 E-value=2.5e-06 Score=83.32 Aligned_cols=243 Identities=15% Similarity=0.068 Sum_probs=151.8
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEE-EEEc--------------------CCcEEEEEEcC-CceEEE
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--------------------DKNVQEIKISP-GIMLLI 249 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l-~tl~--------------------~~~V~~VafSp-g~~ll~ 249 (485)
+..|..++++ ++|.+|..+..++.|..||..+++.. +... ......|++.| ++.|.+
T Consensus 18 ~~~p~~i~~d-~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 18 SYAPNSFTFD-STNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SSCCCCEECC-TTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred cCCceEEEEc-CCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 4567789997 68986667778899999998876532 2211 13578999997 788877
Q ss_pred EEcCCCCeeEEEEecCCCeEEEEeecC-----CcceeEEEEEec-CCCEEEEEeC-----------------CCcEEEEE
Q 011452 250 FTKASGHVPLKILSIEDGTVLKSFNHL-----LHRNKKVDFIEQ-FNEKLLVKQE-----------------NENLQILD 306 (485)
Q Consensus 250 sss~~~D~tIklWdi~tG~~L~tl~~~-----~~~~~~V~f~~~-~~~~lls~s~-----------------D~tIkIWD 306 (485)
+... ..|..+|..+|+ ++.+... ......|++. + ++...++-.. ++.|..+|
T Consensus 97 ~d~~---~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d-~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 97 VDCY---YHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVD-QRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp EETT---TEEEEECTTCEE-CEEEESEETTEECSCEEEEEEC-TTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred EECC---CCEEEEeCCCCE-EEEecccCCCCcccccceEEEe-cCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 7443 348888987664 3333211 1234567764 5 4544443222 36788899
Q ss_pred CCCCeeEEecccCCCceEEEEEcCCCc-EEEEEe-CCcEEEEeCCCc---EEEEeecCCCCCCCCCeeEEEECCCCCEEE
Q 011452 307 VRNFELTEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFRGE---LVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (485)
Q Consensus 307 v~tg~~~~~l~gh~~~v~avaFspdg~-llaS~s-D~TIklWd~~G~---ll~tl~gH~~~~~~~~v~svafSpDG~~La 381 (485)
..+++..... .....++.++|+|||+ ++++-. ++.|..++++++ ....+.. . . . -..|++.++|.+.+
T Consensus 172 ~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~-~---g-P~gi~~d~~G~l~v 244 (322)
T 2fp8_A 172 PSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-I-P---N-PGNIKRNADGHFWV 244 (322)
T ss_dssp TTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-C-S---S-EEEEEECTTSCEEE
T ss_pred CCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-C-C---C-CCCeEECCCCCEEE
Confidence 9888764433 2335678899999998 555656 889999998742 1222321 1 1 1 46899999999888
Q ss_pred EEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEE
Q 011452 382 SYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITA 461 (485)
Q Consensus 382 S~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~s 461 (485)
+...... .....+..+.|..+|. .|+.+..+....+. .+..+++
T Consensus 245 a~~~~~~-~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~----------------------------------~~~~~~~ 288 (322)
T 2fp8_A 245 SSSEELD-GNMHGRVDPKGIKFDE-FGNILEVIPLPPPF----------------------------------AGEHFEQ 288 (322)
T ss_dssp EEEEETT-SSTTSCEEEEEEEECT-TSCEEEEEECCTTT----------------------------------TTSCCCE
T ss_pred EecCccc-ccccCCCccEEEEECC-CCCEEEEEECCCCC----------------------------------ccccceE
Confidence 7642000 0000011256888885 58988888654310 0125677
Q ss_pred EEEcCCCCEEEEecCCCcEEEcc
Q 011452 462 LFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 462 l~fspDg~~LaSgs~DgtVklWd 484 (485)
+++ .+|+..++....+.|..++
T Consensus 289 ~~~-~~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 289 IQE-HDGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp EEE-ETTEEEEECSSCSEEEEEE
T ss_pred EEE-eCCEEEEeecCCCceEEEe
Confidence 777 4777777776777777665
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.75 E-value=9.6e-06 Score=79.05 Aligned_cols=231 Identities=12% Similarity=0.050 Sum_probs=143.4
Q ss_pred CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCC
Q 011452 125 NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVN 204 (485)
Q Consensus 125 G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pn 204 (485)
.+.+.++.. ......++++|+|+.+++ . ... +.+..++ ..|+.. ..+.. -..|..++|+ ++
T Consensus 22 ~~~~~~~p~--~~~pegia~~~~g~lyv~-d--~~~-------~~I~~~d-~~g~~~---~~~~~--~~~p~gia~~-~d 82 (306)
T 2p4o_A 22 AKIITSFPV--NTFLENLASAPDGTIFVT-N--HEV-------GEIVSIT-PDGNQQ---IHATV--EGKVSGLAFT-SN 82 (306)
T ss_dssp EEEEEEECT--TCCEEEEEECTTSCEEEE-E--TTT-------TEEEEEC-TTCCEE---EEEEC--SSEEEEEEEC-TT
T ss_pred ceEeEeCCC--CCCcceEEECCCCCEEEE-e--CCC-------CeEEEEC-CCCceE---EEEeC--CCCceeEEEc-CC
Confidence 444555533 245789999999986554 1 112 3565566 345431 22332 2457789997 78
Q ss_pred CeEEEEeeCCC--cEEEeecCCCeEEE--EEcC-CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeE-EEEeec---
Q 011452 205 GKVLTYSAQDS--IYKVFDLKNYTMLY--SISD-KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTV-LKSFNH--- 275 (485)
Q Consensus 205 G~~Las~s~D~--tiKlWdl~~g~~l~--tl~~-~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~-L~tl~~--- 275 (485)
|+++++..... .|-.+|..+|+... .+.. ..-..+++.++++++++... .+.|..+|..+|+. +....+
T Consensus 83 G~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~--~g~i~~~d~~~~~~~v~~~~~~~~ 160 (306)
T 2p4o_A 83 GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY--RGAIWLIDVVQPSGSIWLEHPMLA 160 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT--TTEEEEEETTTTEEEEEEECGGGS
T ss_pred CcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC--CCeEEEEeCCCCcEeEEEECCccc
Confidence 99877665433 35556777887533 2222 34466777788887776432 36788888776532 211111
Q ss_pred ------CCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCC-Cee--EEecccCCCceEEEEEcCCCcEEEEEe-CCcEE
Q 011452 276 ------LLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN-FEL--TEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVA 344 (485)
Q Consensus 276 ------~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~t-g~~--~~~l~gh~~~v~avaFspdg~llaS~s-D~TIk 344 (485)
....-..| .++++.|.++ ...+.|..+|+.. ++. .+++. ....+..+++.++|+++++.. .+.|.
T Consensus 161 ~~~~~~~~~~pngi---s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~ 236 (306)
T 2p4o_A 161 RSNSESVFPAANGL---KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVV 236 (306)
T ss_dssp CSSTTCCSCSEEEE---EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEE
T ss_pred cccccCCCCcCCCc---CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEE
Confidence 11122344 3667778776 5789999999875 432 22221 124577899999999998888 88999
Q ss_pred EEeCCCcEEE--EeecCCCCCCCCCeeEEEEC---CCCCEEEEEec
Q 011452 345 VWNFRGELVT--SFEDHLLWHPDCNTNNIYIT---SDQDLIISYCK 385 (485)
Q Consensus 345 lWd~~G~ll~--tl~gH~~~~~~~~v~svafS---pDG~~LaS~s~ 385 (485)
++|.+|++.. .+.....+ ..+++|. ||++.|...+.
T Consensus 237 ~~~~~G~~~~~~~~~~~~~~-----p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 237 RIAPDRSTTIIAQAEQGVIG-----STAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EECTTCCEEEEECGGGTCTT-----EEEEEECCSTTTTTEEEEEEC
T ss_pred EECCCCCEEEEeecccccCC-----ceEEEEecccCCCCEEEEECC
Confidence 9999998744 33322223 7899999 89877766553
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.72 E-value=1.3e-06 Score=86.74 Aligned_cols=179 Identities=13% Similarity=0.088 Sum_probs=130.9
Q ss_pred EEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcCCc--EEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEee
Q 011452 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN--VQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~~~--V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~ 274 (485)
.++|+ ++.+..+.+.++.|++.|+++|+.+.++.+.. -..|++..+ .+....- .++.+.++|.+|+++++++.
T Consensus 59 GL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~-~Ly~ltw--~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 59 GLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGE-RLYQLTW--TEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSS-CEEEEES--SSCEEEEEETTTTEEEEEEE
T ss_pred eEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCC-EEEEEEc--cCCEEEEEECCcCcEEEEEe
Confidence 68897 58999999999999999999999766653333 344777655 4444333 34799999999999999998
Q ss_pred cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc--C---CCceEEEEEcCCCcEEEEEe-CCcEEEEeC
Q 011452 275 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT--E---FMTPSAFIFLYENQLFLTFR-NRTVAVWNF 348 (485)
Q Consensus 275 ~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g--h---~~~v~avaFspdg~llaS~s-D~TIklWd~ 348 (485)
.- ..-+.++ ++++.|.++..+++|.++|.+|.+.+..+.- + ...++.+.+. +|+++|... +.+|.+=|.
T Consensus 134 ~~-~eGwGLt---~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 134 YS-GEGWGLC---YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp CS-SCCCCEE---EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred CC-CceeEEe---cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 42 3335565 4578888887799999999999988776532 1 1244666666 889998887 889999999
Q ss_pred C-CcEEEEeecCCC--------CCCCCCeeEEEECCCCCEEEEEec
Q 011452 349 R-GELVTSFEDHLL--------WHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 349 ~-G~ll~tl~gH~~--------~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
+ |+.+.+++-..+ .......|.||++|+++.|...++
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 5 999988764311 112234799999998777766554
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.71 E-value=7.2e-06 Score=80.08 Aligned_cols=197 Identities=10% Similarity=-0.009 Sum_probs=127.4
Q ss_pred cCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE--EEE-EcC---CcEEEEEEcC-CceEEEEEcC------------
Q 011452 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYS-ISD---KNVQEIKISP-GIMLLIFTKA------------ 253 (485)
Q Consensus 193 ~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~--l~t-l~~---~~V~~VafSp-g~~ll~sss~------------ 253 (485)
..|..++|++.+|.+++.... +-+..+|.++++. +.. ..+ .....|++.| ++.+.++...
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 356789998337887776544 4478888876642 211 111 3578999999 8887776543
Q ss_pred ---CCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCe--eEEecccCCCceEEEE
Q 011452 254 ---SGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFE--LTEVSRTEFMTPSAFI 327 (485)
Q Consensus 254 ---~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~--~~~~l~gh~~~v~ava 327 (485)
..++.|..+|..+|+......+ ...-..|+|. +++..|.++ ..++.|..+|+.+.. ..+.+..... +..++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~-~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~ 235 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVS-ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIK 235 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEEC-TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEE
T ss_pred cccCCCceEEEEeCCCCEEEEeccC-CccCcceEEC-CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeE
Confidence 1236788899888875433332 2334578885 667777776 577999999988521 1122211123 88999
Q ss_pred EcCCCcEEEEEeC-----------CcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCC
Q 011452 328 FLYENQLFLTFRN-----------RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGN 396 (485)
Q Consensus 328 Fspdg~llaS~sD-----------~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~ 396 (485)
+.++|++.++... +.|..+|.+|+.+..+........ ..+.++++ .+|++.++...
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~-~~~~~~~~-~~g~L~v~~~~----------- 302 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAG-EHFEQIQE-HDGLLYIGTLF----------- 302 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTT-SCCCEEEE-ETTEEEEECSS-----------
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCcc-ccceEEEE-eCCEEEEeecC-----------
Confidence 9999999888653 567788888999988875432100 11567777 57777776543
Q ss_pred CCeEEEEeCC
Q 011452 397 AGSINISNIL 406 (485)
Q Consensus 397 DgtIklWdl~ 406 (485)
.+.|..+++.
T Consensus 303 ~~~i~~~~~~ 312 (322)
T 2fp8_A 303 HGSVGILVYD 312 (322)
T ss_dssp CSEEEEEEC-
T ss_pred CCceEEEecc
Confidence 5778888864
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.71 E-value=3.5e-06 Score=82.47 Aligned_cols=179 Identities=12% Similarity=0.077 Sum_probs=129.5
Q ss_pred EEEEeCCCCeEEEEeeCC--CcEEEeecCCCeEEEEEc-CCcE--EEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEE
Q 011452 197 FVEFDDVNGKVLTYSAQD--SIYKVFDLKNYTMLYSIS-DKNV--QEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLK 271 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D--~tiKlWdl~~g~~l~tl~-~~~V--~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~ 271 (485)
.++|+ ++.+..|.+.+ +.|++.|+++|+.+.++. .... ..+++.. +.+....- .++.+-++|.+|++++.
T Consensus 25 GL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw--~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 25 GLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTW--RNHEGFVYDLATLTPRA 99 (243)
T ss_dssp EEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEES--SSSEEEEEETTTTEEEE
T ss_pred cEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEe--eCCEEEEEECCcCcEEE
Confidence 58897 38888888875 599999999999988875 3333 3455554 44444433 34799999999999999
Q ss_pred EeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCC-----CceEEEEEcCCCcEEEEEe-CCcEEE
Q 011452 272 SFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEF-----MTPSAFIFLYENQLFLTFR-NRTVAV 345 (485)
Q Consensus 272 tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~-----~~v~avaFspdg~llaS~s-D~TIkl 345 (485)
+++.- ..-+.++ ++++.|.++..+++|.++|.+|.+.+..+.-.. ..++.+.+. +|+++|... +..|.+
T Consensus 100 ti~~~-~~Gwglt---~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~v 174 (243)
T 3mbr_X 100 RFRYP-GEGWALT---SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIAR 174 (243)
T ss_dssp EEECS-SCCCEEE---ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EEeCC-CCceEEe---eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEE
Confidence 99842 2234554 467888888678999999999998877653211 234555544 899998887 889999
Q ss_pred EeCC-CcEEEEeecCCCC--------CCCCCeeEEEECCCCCEEEEEec
Q 011452 346 WNFR-GELVTSFEDHLLW--------HPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 346 Wd~~-G~ll~tl~gH~~~--------~~~~~v~svafSpDG~~LaS~s~ 385 (485)
-|.+ |+.+.++.-..+. ......|.||++|+++.|...++
T Consensus 175 IDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 175 IDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 9995 9999887733211 12234799999999888877764
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.70 E-value=1.7e-06 Score=85.77 Aligned_cols=168 Identities=13% Similarity=-0.000 Sum_probs=117.8
Q ss_pred eEEEEEc-C--CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeE--EEEEecCCCEEEEE-eCC
Q 011452 226 TMLYSIS-D--KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKK--VDFIEQFNEKLLVK-QEN 299 (485)
Q Consensus 226 ~~l~tl~-~--~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~--V~f~~~~~~~lls~-s~D 299 (485)
+.+.+++ + ...+.+.|++ +.|..+.+. ++.|+..|++||+.++++ .....+. +++ ++++|... -.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~--~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~---~g~~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ-GHFFESTGH--QGTLRQLSLESAQPVWME--RLGNIFAEGLAS---DGERLYQLTWTE 115 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEETT--TTEEEECCSSCSSCSEEE--ECTTCCEEEEEE---CSSCEEEEESSS
T ss_pred EEEEEEcCCCccccceEEEEC-CEEEEEcCC--CCEEEEEECCCCcEEeEE--CCCCcceeEEEE---eCCEEEEEEccC
Confidence 3445554 2 4689999985 466555443 356999999999999987 2234443 554 46666665 489
Q ss_pred CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCC
Q 011452 300 ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ 377 (485)
Q Consensus 300 ~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG 377 (485)
+.+.++|.++++.+.++.-. ..-+.+ .+||+.|..+. +++|.++|.+ .+.+.+++--....+-..+|.+.+. ||
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~-~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG 191 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYS-GEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG 191 (268)
T ss_dssp CEEEEEETTTTEEEEEEECS-SCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECCcCcEEEEEeCC-CceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC
Confidence 99999999999999887542 233444 46777776666 8899999996 8888877642211111126777876 88
Q ss_pred CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 378 DLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 378 ~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
++.|..-. +++|-+-|..||+.+++|.-
T Consensus 192 ~lyanvw~-----------s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 192 VIYANIWH-----------SSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp EEEEEETT-----------CSEEEEECTTTCBEEEEEEC
T ss_pred EEEEEECC-----------CCeEEEEeCCCCcEEEEEEC
Confidence 76665433 57999999999999999965
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.64 E-value=4.1e-06 Score=90.30 Aligned_cols=264 Identities=12% Similarity=0.040 Sum_probs=153.9
Q ss_pred EEecCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEee--CCCEEEEEEeecC--CCCcccceeEEEEeEecc
Q 011452 102 VAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNK--NNDSLITVSVYAS--DNFSSLRCRSTRIEYIRR 177 (485)
Q Consensus 102 ~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~sp--dg~~Las~S~d~~--~d~stL~~~t~~lw~i~~ 177 (485)
++.++.|+.++.|+.+..+|.+||+.+-.........-..+.-+| .+..|+.++..+. .+ ..+...|..+
T Consensus 112 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~------g~v~a~D~~t 185 (571)
T 2ad6_A 112 AYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVR------GAVNAFDLKT 185 (571)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCC------CEEEEEETTT
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCC------CEEEEEECCC
Confidence 456889999999999999999999988665432100000111122 1345554432110 02 4677778778
Q ss_pred CCcCcccceeeeccc---------------------------cCc------------eEEEEeCCCCeEEEEeeC-----
Q 011452 178 GKPDAGFALFESESL---------------------------KWP------------GFVEFDDVNGKVLTYSAQ----- 213 (485)
Q Consensus 178 G~~~~~~~lf~~~~~---------------------------~~~------------~~V~Fs~pnG~~Las~s~----- 213 (485)
|++ +|+.... .|+ ..+++++.+|.+.+..+.
T Consensus 186 G~~-----~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~ 260 (571)
T 2ad6_A 186 GEL-----KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWN 260 (571)
T ss_dssp CCE-----EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred CcE-----EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCcccc
Confidence 876 3332110 010 136787545665554331
Q ss_pred ------C----CcEEEeecCCCeEEEEEcC--C------cEEEEEE---cCCc---eEEEEEcCCCCeeEEEEecCCCeE
Q 011452 214 ------D----SIYKVFDLKNYTMLYSISD--K------NVQEIKI---SPGI---MLLIFTKASGHVPLKILSIEDGTV 269 (485)
Q Consensus 214 ------D----~tiKlWdl~~g~~l~tl~~--~------~V~~Vaf---Spg~---~ll~sss~~~D~tIklWdi~tG~~ 269 (485)
| ++|..+|+++|+.+..+.. + .+.+..+ .+++ .+++.. +.++.+.++|.+||++
T Consensus 261 ~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~--~~~G~l~~lD~~tG~~ 338 (571)
T 2ad6_A 261 ETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHI--DRNGILYTLNRENGNL 338 (571)
T ss_dssp GGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEE--CTTSEEEEEETTTCCE
T ss_pred CCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEe--CCCcEEEEEECCCCCE
Confidence 2 3699999999998877641 1 1222222 2244 233333 3447999999999999
Q ss_pred EEEeecCC--c-----------ce--------------------------eEEEEEecCCCEEEEEe-------------
Q 011452 270 LKSFNHLL--H-----------RN--------------------------KKVDFIEQFNEKLLVKQ------------- 297 (485)
Q Consensus 270 L~tl~~~~--~-----------~~--------------------------~~V~f~~~~~~~lls~s------------- 297 (485)
+..++-.. . .+ ..++|. |+.+.+.+..
T Consensus 339 ~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~d-p~~g~~yv~~~~~~~~~~~~~~~ 417 (571)
T 2ad6_A 339 IVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYD-PESRTLYAGLNHICMDWEPFMLP 417 (571)
T ss_dssp EEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEE-TTTTEEEEEEECEEEEEEECCCC
T ss_pred EeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceEC-CCCCEEEEEchhccccccccccc
Confidence 98775211 0 00 134554 4455655542
Q ss_pred ------------------------CCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC-Cc
Q 011452 298 ------------------------ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE 351 (485)
Q Consensus 298 ------------------------~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~-G~ 351 (485)
.++.|..||+.+|+.+-...... .+.+..+...+.++..++ |++|..+|.+ |+
T Consensus 418 ~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 418 YRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 35799999999999876654322 233333333344455567 9999999995 99
Q ss_pred EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEe
Q 011452 352 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 384 (485)
Q Consensus 352 ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s 384 (485)
++.+++-..... -..+.+.+||+.++...
T Consensus 497 ~lw~~~~~~~~~----~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 497 ELWNFKMPSGGI----GSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp EEEEEECSSCCC----SCCEEEEETTEEEEEEE
T ss_pred EEEEEeCCCCcE----eeeEEEEECCEEEEEEE
Confidence 999887443211 22345568888766654
No 261
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.63 E-value=9.1e-06 Score=90.01 Aligned_cols=244 Identities=10% Similarity=0.044 Sum_probs=142.9
Q ss_pred cEEEEEEe-eCCCEEEEEEee-cCCCCcccceeEEEEeEeccC-CcCcccceeeeccccCceEEEEeCCCCeEEEEeeCC
Q 011452 138 VIRSLFYN-KNNDSLITVSVY-ASDNFSSLRCRSTRIEYIRRG-KPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD 214 (485)
Q Consensus 138 ~i~sv~~s-pdg~~Las~S~d-~~~d~stL~~~t~~lw~i~~G-~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D 214 (485)
.+.+..|| |||+.||.++.. |++. .++.++++..| +... ..+.. ....++|+ |||+.|++.+.|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~------~~l~v~dl~~g~~~l~--~~~~~----~~~~~~Ws-pDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEV------YTIEFKRISDPSQTIA--DKVSG----TNGEIVWG-PDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSC------EEEEEEETTCTTCCCC--CCEEE----ECSCCEEC-SSTTEEEEEEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCce------EEEEEEECCCCCEeCC--ccccC----ceeeEEEe-cCCCEEEEEEEC
Confidence 68899999 999999876653 3333 57889999888 6311 01111 12367898 799999998876
Q ss_pred -----CcEEEeecCCCe----EEEEEcC-CcEEEEEEcCCce-EEEEEcCCCCeeEEEEecCCC--eE-EEEee-cCCcc
Q 011452 215 -----SIYKVFDLKNYT----MLYSISD-KNVQEIKISPGIM-LLIFTKASGHVPLKILSIEDG--TV-LKSFN-HLLHR 279 (485)
Q Consensus 215 -----~tiKlWdl~~g~----~l~tl~~-~~V~~VafSpg~~-ll~sss~~~D~tIklWdi~tG--~~-L~tl~-~~~~~ 279 (485)
..|.++++.+++ +++.-.+ ....++.+||++. |++++.......|.++|+.++ +. ++.+. +....
T Consensus 242 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV 321 (751)
T ss_dssp TTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred CCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc
Confidence 357788887764 4444333 3567899998664 454443334577889999886 33 14443 33344
Q ss_pred eeEEEEEecCCCEEEEEe-CC--C--cEEEEECCCC-eeEE-ecccCCC--ceEEEEEcCCCcEEEEEe-CCcEEE--Ee
Q 011452 280 NKKVDFIEQFNEKLLVKQ-EN--E--NLQILDVRNF-ELTE-VSRTEFM--TPSAFIFLYENQLFLTFR-NRTVAV--WN 347 (485)
Q Consensus 280 ~~~V~f~~~~~~~lls~s-~D--~--tIkIWDv~tg-~~~~-~l~gh~~--~v~avaFspdg~llaS~s-D~TIkl--Wd 347 (485)
.++++|. +++.|+..+ .| + .|-.+|+.++ +... .+ .|.. .+..+.+. ++.++++.. |+..+| +|
T Consensus 322 ~~s~~~~--~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li-~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 322 RYDVQMH--GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLV-DHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp CEEEEEE--TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEE-CCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEE
T ss_pred eEEEeee--eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEE-CCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEe
Confidence 4566653 377776654 33 3 4555577653 3333 23 3332 44555554 455666666 886555 45
Q ss_pred C-------C-CcEEEEee--cCCCCCCCCCeeEEEE------CCCCC-EEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 348 F-------R-GELVTSFE--DHLLWHPDCNTNNIYI------TSDQD-LIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 348 ~-------~-G~ll~tl~--gH~~~~~~~~v~svaf------SpDG~-~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
+ . |+.++.+. +. ...+.| ++|++ ++++++. ...-.+|.+.|+.+|+.
T Consensus 398 l~~~~~~~~~g~~~~~l~l~~~--------~~~~~~~~~~~~~~~~~~l~~~~ss--------~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 398 ADSQDGVFKAGTGLREVVMEEP--------IFTVHLVESQMLEYEEPTFRMEYSS--------LATPNTWFDVSPQDHSR 461 (751)
T ss_dssp CCTTTSCCCTTTCCEECCCCCS--------SCEEEECGGGCCCTTCSCEEEEEEE--------TTEEEEEEEECTTTCCE
T ss_pred cccccccccCCccceEECCCCc--------eeEEEeccCcccCCCCCEEEEEEeC--------CCCCCEEEEEECCCCcE
Confidence 4 4 44134432 21 123345 45665 5556553 11225688888888863
Q ss_pred EEEec
Q 011452 411 LAKIR 415 (485)
Q Consensus 411 l~tl~ 415 (485)
..|.
T Consensus 462 -~~l~ 465 (751)
T 2xe4_A 462 -TAVK 465 (751)
T ss_dssp -EEEE
T ss_pred -EEEe
Confidence 3343
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=0.00036 Score=76.72 Aligned_cols=314 Identities=10% Similarity=0.025 Sum_probs=189.5
Q ss_pred cceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEeec------CCcccEEEEEEeeCCCEEEEEEeecCCCCccccee
Q 011452 96 SKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNV------TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCR 168 (485)
Q Consensus 96 s~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g------~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~ 168 (485)
..|.+|... +..|-.+..++-+..++.++++....... -....|++|+..++|..+|.. .+
T Consensus 163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt-----~~------- 230 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGT-----SK------- 230 (781)
T ss_dssp CCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEE-----TT-------
T ss_pred cceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEe-----CC-------
Confidence 458888876 56666677664566788776654432111 123569999999999987642 12
Q ss_pred EEEEeEeccCCcCcccceeeec-------cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEE-----------
Q 011452 169 STRIEYIRRGKPDAGFALFESE-------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS----------- 230 (485)
Q Consensus 169 t~~lw~i~~G~~~~~~~lf~~~-------~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~t----------- 230 (485)
-+.+++...+++. .+... ....+.++..+ .+|.+.+ |...+-+.++|..+++....
T Consensus 231 Gl~~~d~~~~~~~----~~~~~~~~~~~l~~~~i~~i~~d-~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~ 304 (781)
T 3v9f_A 231 GLALFNANTETFT----NFHNNPGNIHGALSSYIFSIKQL-KDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREG 304 (781)
T ss_dssp EEEEEETTTTEEE----C-----------CCCCEEEEEEC-TTSEEEE-EESSSCEEEEETTCC---------CEEECBC
T ss_pred cHheECCCCCcEE----EEEcCCCccccccCceEEEEEEC-CCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCC
Confidence 3445564444431 11110 12345577776 6888766 44435577889887664221
Q ss_pred -----EcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeec----------CCcceeEEEEEecCCCEEEE
Q 011452 231 -----ISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH----------LLHRNKKVDFIEQFNEKLLV 295 (485)
Q Consensus 231 -----l~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~----------~~~~~~~V~f~~~~~~~lls 295 (485)
+....|.++...+++.+-++... +-|..++..++... .+.. ....+.++.. ..++.|-+
T Consensus 305 ~~~~~l~~~~v~~i~~D~~g~lWigt~~---~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~--d~~g~lWi 378 (781)
T 3v9f_A 305 DNNYSLSNASARYIFQDSFNNIWIGTWG---GGINFISNAPPTFH-TWSYSPTQMNESSLSNKVVSSVCD--DGQGKLWI 378 (781)
T ss_dssp SSTTSBSSSCEEEEEECSSCCEEEEEBS---SCEEEECSSCCSCE-EEC----CCCSSCCSSSCEEEEEE--CTTSCEEE
T ss_pred CCCCCCCCCeEEEEEEeCCCCEEEEecC---CeEEEeCCCCCcce-eeccCccccccCCCCCcceEEEEE--cCCCCEEE
Confidence 23457999999876666655322 46888887765532 2211 1133555553 23467888
Q ss_pred EeCCCcEEEEECCCCeeEEec---ccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEE
Q 011452 296 KQENENLQILDVRNFELTEVS---RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIY 372 (485)
Q Consensus 296 ~s~D~tIkIWDv~tg~~~~~l---~gh~~~v~avaFspdg~llaS~sD~TIklWd~~G~ll~tl~gH~~~~~~~~v~sva 372 (485)
+.+++-|.++|..+++..... ......|.+++..++|++.+...++-|-.+|.+...++.+..... +...|.+|+
T Consensus 379 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~--~~~~v~~i~ 456 (781)
T 3v9f_A 379 GTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKN--ELLDVRVFY 456 (781)
T ss_dssp EEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTT--CCCCEEEEE
T ss_pred EeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCC--CCCeEEEEE
Confidence 887788999999876554321 123467999999999998885546778889986333444432111 112389999
Q ss_pred ECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccch
Q 011452 373 ITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTV 452 (485)
Q Consensus 373 fSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (485)
..++|.+.+... +-|.++|..+++.......... .
T Consensus 457 ~d~~g~lwigt~-------------~Gl~~~~~~~~~~~~~~~~~~~--~------------------------------ 491 (781)
T 3v9f_A 457 EDKNKKIWIGTH-------------AGVFVIDLASKKVIHHYDTSNS--Q------------------------------ 491 (781)
T ss_dssp ECTTSEEEEEET-------------TEEEEEESSSSSCCEEECTTTS--S------------------------------
T ss_pred ECCCCCEEEEEC-------------CceEEEeCCCCeEEecccCccc--c------------------------------
Confidence 999999887642 4588899888765433221110 0
Q ss_pred hcccCCeEEEEEcCCCCEEEEecCCCcEE
Q 011452 453 AEALEDITALFYDEDRNEIYTGNRHGLVH 481 (485)
Q Consensus 453 ~~~l~~V~sl~fspDg~~LaSgs~DgtVk 481 (485)
.....|.+++.+++|+..+....+|..+
T Consensus 492 -~~~~~i~~i~~d~~g~lWigt~~~Gl~~ 519 (781)
T 3v9f_A 492 -LLENFVRSIAQDSEGRFWIGTFGGGVGI 519 (781)
T ss_dssp -CSCSCEEEEEECTTCCEEEEESSSCEEE
T ss_pred -cccceeEEEEEcCCCCEEEEEcCCCEEE
Confidence 0002789999999999877665566544
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.59 E-value=9.3e-06 Score=88.14 Aligned_cols=265 Identities=9% Similarity=-0.026 Sum_probs=152.2
Q ss_pred cCEEEEEeCCC-----------eEEeeecccCc--EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEE
Q 011452 105 RDIVFALAQSG-----------VCAAFCRETNQ--RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (485)
Q Consensus 105 ~~~ias~s~dg-----------tiklW~~~tG~--~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~ 171 (485)
+++++.|+.+. .+.+||..+++ .+..+...+.....++++.++|+.++.++. ++ ..+.
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~---~~------~~v~ 268 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN---DA------KKTS 268 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS---ST------TCEE
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC---CC------CceE
Confidence 77888876543 68899998877 334444434444556888999998887542 22 2678
Q ss_pred EeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEee-CC-----CcEEEeecCCCeEEEE-------EcCCcEEE
Q 011452 172 IEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA-QD-----SIYKVFDLKNYTMLYS-------ISDKNVQE 238 (485)
Q Consensus 172 lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s-~D-----~tiKlWdl~~g~~l~t-------l~~~~V~~ 238 (485)
++|..+++......+ .. -.+-..+++- +||++++.|+ .+ .++.+||..+.+-... +.... ..
T Consensus 269 ~yd~~t~~W~~~~~~-~~--~R~~~s~~~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~~ 343 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDM-QV--ARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-KQ 343 (656)
T ss_dssp EEEGGGTEEEECCCC-SS--CCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-TT
T ss_pred EecCcCCceeECCCC-Cc--cccccceEEe-cCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-cc
Confidence 888876654211010 00 1121244553 5899999998 44 6799999988774322 10000 00
Q ss_pred EEEcCCceE-EEEEcC------CCCeeEEEEecCCCeEEEEeecCCc---------ceeEEEEEecCCCEEEEEeCCC--
Q 011452 239 IKISPGIML-LIFTKA------SGHVPLKILSIEDGTVLKSFNHLLH---------RNKKVDFIEQFNEKLLVKQENE-- 300 (485)
Q Consensus 239 VafSpg~~l-l~sss~------~~D~tIklWdi~tG~~L~tl~~~~~---------~~~~V~f~~~~~~~lls~s~D~-- 300 (485)
.++..++.+ +..... .....+..||.++.+.......+.. .-..|.|...++..+++|+.++
T Consensus 344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCC
Confidence 011111111 221110 1125789999998876655443211 1234555333444445566432
Q ss_pred ---------cEEEEECCCCeeEEec--ccCCCce-EEEEEcCCCcEEEEEe-C-----------CcEEEEeCCCcEEEEe
Q 011452 301 ---------NLQILDVRNFELTEVS--RTEFMTP-SAFIFLYENQLFLTFR-N-----------RTVAVWNFRGELVTSF 356 (485)
Q Consensus 301 ---------tIkIWDv~tg~~~~~l--~gh~~~v-~avaFspdg~llaS~s-D-----------~TIklWd~~G~ll~tl 356 (485)
.|.+||..+.+..+.. .-+..+. -+.+..|||++++.++ + .++.+||.....-..+
T Consensus 424 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~ 503 (656)
T 1k3i_A 424 DSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQ 503 (656)
T ss_dssp SSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEEC
T ss_pred CCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeec
Confidence 7889999988776654 2222222 2345789999999997 5 5789999963333333
Q ss_pred ecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 357 EDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 357 ~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
..- ..+........+.|||++++.|+.
T Consensus 504 ~~~--~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 504 NPN--SIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCC--SSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCC--CCccccccHhhcCCCcEEEecCCC
Confidence 211 112222345667899999999984
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.00011 Score=76.17 Aligned_cols=236 Identities=13% Similarity=0.103 Sum_probs=145.7
Q ss_pred EEEEEe---cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEe
Q 011452 99 IEIVAA---RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYI 175 (485)
Q Consensus 99 ~~i~~s---~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i 175 (485)
..|++. +..|..+...+.|+.++.++++ +.++.. ....-+.|+|+|+|+.|..+...+. ..+..-+|..
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~------~~~~~v~~~~ 211 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-VSTVYS-GLSKVRTICWTHEADSMIITNDQNN------NDRPNNYILT 211 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTE-EEEEEC-CCSCEEEEEECTTSSEEEEEECCSC------TTSEEEEEEE
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCE-EEEEec-CCCCcceEEEeCCCCEEEEEeCCCC------cccceEEEEe
Confidence 355555 3566666666889999988544 445544 3445899999999996655432111 1122234444
Q ss_pred ccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE--EEEEcC-CcEEEEEEcCCce-EEEEE
Q 011452 176 RRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSISD-KNVQEIKISPGIM-LLIFT 251 (485)
Q Consensus 176 ~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~--l~tl~~-~~V~~VafSpg~~-ll~ss 251 (485)
+.|.+... ..+. .+.+|..+++++.+|.++++...++.|..+|..++.. +..+.. ..-..|+|+|++. +.++.
T Consensus 212 ~~g~~~~~-~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 212 RESGFKVI-TELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp GGGTSCSE-EEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred CCCceeee-eeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 66765321 1222 3578889999843899888887888999999987765 223322 3567899998665 65654
Q ss_pred cCCCCeeEEEEecC--CCeE--EEEeecCC---------------ccee-EEEEEec------CCCEEEEE-eCCCcEEE
Q 011452 252 KASGHVPLKILSIE--DGTV--LKSFNHLL---------------HRNK-KVDFIEQ------FNEKLLVK-QENENLQI 304 (485)
Q Consensus 252 s~~~D~tIklWdi~--tG~~--L~tl~~~~---------------~~~~-~V~f~~~------~~~~lls~-s~D~tIkI 304 (485)
.. ...|..++.. +|+. +.++.+.. ..-. .++..+. ..+.|.++ ...+.|+.
T Consensus 289 ~~--~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~ 366 (430)
T 3tc9_A 289 VN--QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRI 366 (430)
T ss_dssp TT--TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEE
T ss_pred CC--CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEE
Confidence 33 3688887654 3443 33443320 0111 2332110 12456666 57889999
Q ss_pred EECCCCeeEEeccc-----------------CCCceEEEEEcC-CCcEEEEEe-CCcEEEEeC
Q 011452 305 LDVRNFELTEVSRT-----------------EFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNF 348 (485)
Q Consensus 305 WDv~tg~~~~~l~g-----------------h~~~v~avaFsp-dg~llaS~s-D~TIklWd~ 348 (485)
+|. +|+....... ....++.+++.| +|.++++-. ++.|+..+.
T Consensus 367 i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 367 LTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp ECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 994 5765444311 245799999999 688888887 888887765
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=4.6e-05 Score=79.10 Aligned_cols=257 Identities=10% Similarity=0.082 Sum_probs=149.4
Q ss_pred cccCceEEEEeC-CCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCce-EEEEEcCCC--CeeEEEEecC
Q 011452 191 SLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIM-LLIFTKASG--HVPLKILSIE 265 (485)
Q Consensus 191 ~~~~~~~V~Fs~-pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~-ll~sss~~~--D~tIklWdi~ 265 (485)
.+..|..|+|++ .+|.+.++... +.|+.+|+++++....+. ...-..|+|+|++. +.++..... ...+-..+ .
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~ 212 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-R 212 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-G
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-C
Confidence 366888999983 24665555443 889999998877544444 35688999998554 666643221 12333333 3
Q ss_pred CCeEE--EEeecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEec-ccCCCceEEEEEcCCCc-EEEEEe-
Q 011452 266 DGTVL--KSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVS-RTEFMTPSAFIFLYENQ-LFLTFR- 339 (485)
Q Consensus 266 tG~~L--~tl~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l-~gh~~~v~avaFspdg~-llaS~s- 339 (485)
+|... ..+.. ..+...|++. |+++.|.++ ..++.|..+|..+++..... .+....++.++|+|+|+ ++++-.
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavd-p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETH-PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEEC-TTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred CCceeeeeeecc-CCCceEEEEe-CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 44332 33332 2345677775 545666666 47889999999988763332 22235789999999999 667766
Q ss_pred CCcEEEEeCCC---cE--EEEeecC---CCCCCC-------CCee-EEEEC--------CCCCEEEEEecCCCCCCCCcC
Q 011452 340 NRTVAVWNFRG---EL--VTSFEDH---LLWHPD-------CNTN-NIYIT--------SDQDLIISYCKADSDDPLAEG 395 (485)
Q Consensus 340 D~TIklWd~~G---~l--l~tl~gH---~~~~~~-------~~v~-svafS--------pDG~~LaS~s~d~~~d~~~~~ 395 (485)
++.|..++.+| ++ +.++.+. ..+... ..-. .+++. ++|.+.++=..
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~---------- 360 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE---------- 360 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG----------
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC----------
Confidence 89999988764 22 3444432 111000 0012 46663 55777777443
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCC-CCEEEEe
Q 011452 396 NAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDED-RNEIYTG 474 (485)
Q Consensus 396 ~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspD-g~~LaSg 474 (485)
.+.|+.++ .+|+. .++-+... .+ . .++.+ . . ...+..|..-+.|+++|+ |..+++-
T Consensus 361 -n~~I~~i~-~~G~v-~~~~g~g~----------~~-~--~G~~d-----G-~-~~~~~~~~~P~giavd~~~g~lyVaD 417 (430)
T 3tc9_A 361 -NHCIRILT-PQGRV-TTFAGRGS----------NG-T--SGYND-----G-D-LRQEARFNHPEGIVYDEERECFFIGD 417 (430)
T ss_dssp -GTEEEEEC-TTSEE-EEEEECCT----------TS-S--SSCBC-----E-E-TTTTCBCSSEEEEEEETTTTEEEEEE
T ss_pred -CcEEEEEC-CCCcE-EEEEeCCC----------CC-C--CcccC-----C-C-chhhcEeCCCcEEEEECCCCEEEEEE
Confidence 47899998 56854 44444310 00 0 00000 0 0 000111336789999995 6666666
Q ss_pred cCCCcEEEcc
Q 011452 475 NRHGLVHVWS 484 (485)
Q Consensus 475 s~DgtVklWd 484 (485)
.....|+..+
T Consensus 418 ~~n~rIr~i~ 427 (430)
T 3tc9_A 418 RENRRIRKIG 427 (430)
T ss_dssp GGGTEEEEEE
T ss_pred CCCCeEEEEc
Confidence 6667777543
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.49 E-value=0.00024 Score=72.39 Aligned_cols=227 Identities=12% Similarity=0.094 Sum_probs=150.3
Q ss_pred CCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeecccc
Q 011452 114 SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLK 193 (485)
Q Consensus 114 dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~ 193 (485)
...|+..+...++....+.+ -.....|+|.+.++.|.-+. ... +.|..+++..+.. ..++.. .+.
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D--~~~-------~~I~r~~~~g~~~---~~~~~~-~~~ 159 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSD--VTL-------DRILRANLNGSNV---EEVVST-GLE 159 (386)
T ss_dssp BSCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEE--TTT-------TEEEEEETTSCCE---EEEECS-SCS
T ss_pred CccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEe--CCC-------CcEEEEecCCCCc---EEEEeC-CCC
Confidence 45677777775444333332 33588999998777776532 222 3566666433322 122222 345
Q ss_pred CceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEE
Q 011452 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVL 270 (485)
Q Consensus 194 ~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L 270 (485)
.|..+++++.+|.+..+....+.|.+.+++.......+.. ..-..|++.| ++.+..+.... ...|...+. +|+..
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~-~~~I~r~~~-dG~~~ 237 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSM-DGSGR 237 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS-SCEEEEEET-TSCSC
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC-CCEEEEEeC-CCCCc
Confidence 6778999866788888888888999999875432222332 4678999997 66666664322 257777786 45554
Q ss_pred EEee-cCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEe
Q 011452 271 KSFN-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 347 (485)
Q Consensus 271 ~tl~-~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd 347 (485)
..+. .....-..|+|. +++++|..+ +..+.|..+|+........+......+..+++ .++.++.+.. .+.|...|
T Consensus 238 ~~~~~~~~~~PnGlavd-~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 238 RIIADTHLFWPNGLTID-YAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEECSSCSCEEEEEEE-GGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCeeeEEEe-CCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 4443 223445689986 567788777 57789999999865555555555668999999 7788888888 89999999
Q ss_pred -CCCcEEEEeecC
Q 011452 348 -FRGELVTSFEDH 359 (485)
Q Consensus 348 -~~G~ll~tl~gH 359 (485)
.+|+.++++...
T Consensus 316 ~~~G~~~~~i~~~ 328 (386)
T 3v65_B 316 KFTGKNQEIIRNK 328 (386)
T ss_dssp TTTCCSCEEEECS
T ss_pred CCCCcceEEEccC
Confidence 478888877654
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.49 E-value=0.0001 Score=75.13 Aligned_cols=207 Identities=13% Similarity=0.111 Sum_probs=139.9
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCC
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDG 267 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG 267 (485)
.+.++..|+|++.++.+..+....+.|..+++.++.....+.. .....|++.+ ++.|..+... ...|.+.++...
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~--~~~I~~~~~dg~ 191 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG--TSRIEVANLDGA 191 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT--TTEEEECBTTSC
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC--CCeEEEEeCCCC
Confidence 3567789999976888888888889999999887654333332 3456799996 6777666443 368888888543
Q ss_pred eEEEEeecCCcceeEEEEEecCCCEEEEEe-CC-CcEEEEECCCCeeEEecccCCCceEEEEEcC-CCcEEEEEe-CCcE
Q 011452 268 TVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-EN-ENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTV 343 (485)
Q Consensus 268 ~~L~tl~~~~~~~~~V~f~~~~~~~lls~s-~D-~tIkIWDv~tg~~~~~l~gh~~~v~avaFsp-dg~llaS~s-D~TI 343 (485)
.....+......-..|++. |.++.|..+. .+ +.|...++...............++.++|+| +++++.+-+ .+.|
T Consensus 192 ~~~~l~~~~l~~P~giavd-p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALH-PMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp SCEEEECSSCSCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred ceEEeecCCCCCCcEEEEE-cCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 3333333333455688875 5677777764 44 7898899885544444445566899999997 555666666 8899
Q ss_pred EEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 344 AVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 344 klWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
...|++|....++-.....+ -.+|++ .++.+.++-.. .+.|...|..+|+.+.++..
T Consensus 271 ~~~d~dG~~~~~~~~~~~~~----P~giav-~~~~ly~td~~-----------~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 271 ERANLDGSHRKAVISQGLPH----PFAITV-FEDSLYWTDWH-----------TKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp EEECTTSCSCEEEECSSCSS----EEEEEE-ETTEEEEEETT-----------TTEEEEEETTTCCSCEEEEC
T ss_pred EEEeCCCCeeEEEEECCCCC----ceEEEE-ECCEEEEeeCC-----------CCeEEEEECCCCcceEEEcc
Confidence 99999866444443222222 467888 44555555432 58899999888988888764
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.48 E-value=8.1e-05 Score=77.48 Aligned_cols=258 Identities=10% Similarity=0.081 Sum_probs=152.1
Q ss_pred cccCceEEEEeC--CCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEEcCCC--CeeEEEEecC
Q 011452 191 SLKWPGFVEFDD--VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIMLLIFTKASG--HVPLKILSIE 265 (485)
Q Consensus 191 ~~~~~~~V~Fs~--pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~ll~sss~~~--D~tIklWdi~ 265 (485)
.+..|..|+|++ .+|.+.++... +.|+.+|+++++....+. ......|+|+|++.|.++..... ...+-..+..
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 467788999983 14777776554 899999998888655443 35689999998666666643211 1112222222
Q ss_pred CCeE-EEEeecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEec--ccCCCceEEEEEcCCCc-EEEEEe-
Q 011452 266 DGTV-LKSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVS--RTEFMTPSAFIFLYENQ-LFLTFR- 339 (485)
Q Consensus 266 tG~~-L~tl~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l--~gh~~~v~avaFspdg~-llaS~s- 339 (485)
.+.. -..+.. ...-..+++. +.++.|.++ ..++.|+.+|..+++....+ .+.......++|+|+|+ ++++-.
T Consensus 216 ~~~~~~~~~~~-~~~P~giavd-~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 216 SGFTERLSLCN-ARGAKTCAVH-PQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GTTCCEEEEEE-CSSBCCCEEC-TTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCeeccccccc-cCCCCEEEEe-CCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 2211 012221 1233466764 445666666 47789999999988763322 12233456799999998 777777
Q ss_pred CCcEEEEeCC---CcE--EEEeecCC---CCCC-------CCCeeEEEE---------CCCCCEEEEEecCCCCCCCCcC
Q 011452 340 NRTVAVWNFR---GEL--VTSFEDHL---LWHP-------DCNTNNIYI---------TSDQDLIISYCKADSDDPLAEG 395 (485)
Q Consensus 340 D~TIklWd~~---G~l--l~tl~gH~---~~~~-------~~~v~svaf---------SpDG~~LaS~s~d~~~d~~~~~ 395 (485)
++.|..++.+ +++ ..++.+.. .+.. ...-..++| .++|.+.++-..
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~---------- 363 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD---------- 363 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT----------
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC----------
Confidence 8999998875 332 23444431 1100 001357999 888888887543
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEc-CCCCEEEEe
Q 011452 396 NAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYD-EDRNEIYTG 474 (485)
Q Consensus 396 ~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fs-pDg~~LaSg 474 (485)
.+.|+.++. +|+ +.++-+....+ ..+ +.+ . ... .+.-+..-++|+++ ++|..+++=
T Consensus 364 -n~~I~~~~~-~G~-v~t~~G~g~~~-------~~G------~~d-----G-~~~-~~~~~~~P~giavd~~~g~lyVaD 420 (433)
T 4hw6_A 364 -SHTVRVLTP-EGR-VTTYAGRGNSR-------EWG------YVD-----G-ELR-SQALFNHPTSIAYDMKRKCFYIGD 420 (433)
T ss_dssp -TTEEEEECT-TSE-EEEEECCCTTC-------SSC------CBC-----E-ETT-TTCBCSSEEEEEEETTTTEEEEEE
T ss_pred -CCEEEEECC-CCC-EEEEEeCCCCC-------ccc------cCC-----C-ccc-cccEeCCCcEEEEECCCCEEEEEe
Confidence 578999984 684 45565532000 000 000 0 000 01113467899999 777777776
Q ss_pred cCCCcEEEcc
Q 011452 475 NRHGLVHVWS 484 (485)
Q Consensus 475 s~DgtVklWd 484 (485)
...+.|+..+
T Consensus 421 ~~n~rIr~i~ 430 (433)
T 4hw6_A 421 CDNHRVRKIA 430 (433)
T ss_dssp GGGTEEEEEE
T ss_pred CCCCEEEEEe
Confidence 6777787654
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.46 E-value=0.00072 Score=67.88 Aligned_cols=226 Identities=12% Similarity=0.095 Sum_probs=147.9
Q ss_pred CeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccC
Q 011452 115 GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKW 194 (485)
Q Consensus 115 gtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~ 194 (485)
..|+..+....+....+.+ -.....|+|.+.++.|.-+- ... +.|..+++..+.. ..+... .+..
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D--~~~-------~~I~r~~~~g~~~---~~~~~~-~~~~ 117 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSD--VTL-------DRILRANLNGSNV---EEVVST-GLES 117 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEE--TTT-------TEEEEEETTSCSC---EEEECS-SCSC
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEe--ccC-------CceEEEecCCCCc---eEEEeC-CCCC
Confidence 3466667664333332322 23478999998877776532 222 3565566433322 122222 3456
Q ss_pred ceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEcC--CcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEE
Q 011452 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLK 271 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~~--~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~ 271 (485)
|..+++++.+|.+..+.+..+.|.+.+++.......+.. ..-..|++.| ++.+..+.... ...|...++ +|+...
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~-dG~~~~ 195 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSM-DGSGRR 195 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS-SCEEEEEET-TSCSCE
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC-CCEEEEEeC-CCCCcE
Confidence 789999866788888888889999999875432222322 4678999998 67766664322 257777776 555555
Q ss_pred Eee-cCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEe-
Q 011452 272 SFN-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN- 347 (485)
Q Consensus 272 tl~-~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd- 347 (485)
++- .....-..|+|. +++++|..+ ...+.|...|+........+......+..+++ .++.++.+-. .+.|...|
T Consensus 196 ~~~~~~~~~PnGla~d-~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 196 IIADTHLFWPNGLTID-YAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANK 273 (349)
T ss_dssp ESCCSSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCcceEEEe-CCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEc
Confidence 553 223445688986 567888777 57789999999865544455555678999999 6788888887 89999999
Q ss_pred CCCcEEEEeecC
Q 011452 348 FRGELVTSFEDH 359 (485)
Q Consensus 348 ~~G~ll~tl~gH 359 (485)
.+|+.++++...
T Consensus 274 ~~G~~~~~i~~~ 285 (349)
T 3v64_C 274 FTGKNQEIIRNK 285 (349)
T ss_dssp TTCCSCEEEECS
T ss_pred cCCCccEEeccC
Confidence 478877777643
No 270
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.46 E-value=6.2e-05 Score=79.85 Aligned_cols=225 Identities=12% Similarity=0.046 Sum_probs=141.0
Q ss_pred cCEEEEEeCCCeEEeeecccC----cEEEEee------cCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeE
Q 011452 105 RDIVFALAQSGVCAAFCRETN----QRICFLN------VTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEY 174 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~tG----~~l~tl~------g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~ 174 (485)
+..++++..+++|.++|..+. +..+++. ......=..+..+||| .+|++..+. +. ..+ ..+-+.|
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~-~g--~~~-g~v~vlD 170 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNE-EG--EGP-GGILMLD 170 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEET-TS--CSC-CEEEEEC
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCc-CC--CCC-CeEEEEE
Confidence 356777888999999998877 6777763 0001123567889999 777655431 10 111 3566667
Q ss_pred eccCCcCcccceeeec--cccCceEEEEeCCCCeEEEEee-------------------CCCcEEEeecCCCeEEEEEcC
Q 011452 175 IRRGKPDAGFALFESE--SLKWPGFVEFDDVNGKVLTYSA-------------------QDSIYKVFDLKNYTMLYSISD 233 (485)
Q Consensus 175 i~~G~~~~~~~lf~~~--~~~~~~~V~Fs~pnG~~Las~s-------------------~D~tiKlWdl~~g~~l~tl~~ 233 (485)
..++++.. .+..+ .......+-|+ |++++++++. .+.+|.+||+.+++.+.++.-
T Consensus 171 ~~T~~v~~---~~~~~~~~~~~~Yd~~~~-p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 171 HYSFEPLG---KWEIDRGDQYLAYDFWWN-LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp TTTCCEEE---ECCSBCTTCCCCCCEEEE-TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred CCCCeEEE---EEccCCCCccccceEEEC-CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 66666632 22211 11111236777 7899888874 379999999999999888863
Q ss_pred ----CcEEEEEE--cCCceEEEEEcC----CCCeeEEEEecCCCeE--EEEe--ec-----C-----------CcceeEE
Q 011452 234 ----KNVQEIKI--SPGIMLLIFTKA----SGHVPLKILSIEDGTV--LKSF--NH-----L-----------LHRNKKV 283 (485)
Q Consensus 234 ----~~V~~Vaf--Spg~~ll~sss~----~~D~tIklWdi~tG~~--L~tl--~~-----~-----------~~~~~~V 283 (485)
..-..|+| +|++..+..... +.+.+|-+|....|+. ++++ .. . ......|
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 24667877 887765544332 1346887766555542 1211 10 0 0224577
Q ss_pred EEEecCCCEEEEEe-CCCcEEEEECC---CCeeEEecccCC--------------CceEEEEEcCCCcEEEEEe
Q 011452 284 DFIEQFNEKLLVKQ-ENENLQILDVR---NFELTEVSRTEF--------------MTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 284 ~f~~~~~~~lls~s-~D~tIkIWDv~---tg~~~~~l~gh~--------------~~v~avaFspdg~llaS~s 339 (485)
.++ +|+..|.++. ..++|.++|+. +.+++....... ..+..++++|||++|..+.
T Consensus 327 ~lS-~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 327 DIS-LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEC-TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 775 7888888886 67899999986 235554442210 1488999999999877653
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.45 E-value=0.0003 Score=69.36 Aligned_cols=182 Identities=10% Similarity=0.064 Sum_probs=122.9
Q ss_pred CCcEEEeecCCCeEEEEEc-CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCC---CeEEEE-eecCCcceeEEEEEe
Q 011452 214 DSIYKVFDLKNYTMLYSIS-DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIED---GTVLKS-FNHLLHRNKKVDFIE 287 (485)
Q Consensus 214 D~tiKlWdl~~g~~l~tl~-~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~t---G~~L~t-l~~~~~~~~~V~f~~ 287 (485)
...|+.-|+.+.+....+. .....+++|++ ++.+..+... .+.|..+++.+ |....+ +.........+++.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd- 85 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD- 85 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSCCCEEEEE-
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC--CCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe-
Confidence 4578888998876555554 35788999996 6777776443 37899999865 233333 33223445678875
Q ss_pred cCCCEEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcC-CCcEEEEEe-C-CcEEEEeCCCcEEEEeec-CCCC
Q 011452 288 QFNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFR-N-RTVAVWNFRGELVTSFED-HLLW 362 (485)
Q Consensus 288 ~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFsp-dg~llaS~s-D-~TIklWd~~G~ll~tl~g-H~~~ 362 (485)
+.++.|..+ ..++.|.+.|+...............+..+++.| +|.++.+.. . +.|...+++|+..+.+-. ...+
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~ 165 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 165 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCC
Confidence 446777666 5789999999986544444444556899999998 566666665 4 789888999887766642 2334
Q ss_pred CCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 363 HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 363 ~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
-+.|+++|+++.|.-+.. ..+.|...|+. |....++
T Consensus 166 -----P~gla~d~~~~~lY~~D~----------~~~~I~~~d~d-g~~~~~~ 201 (316)
T 1ijq_A 166 -----PNGITLDLLSGRLYWVDS----------KLHSISSIDVN-GGNRKTI 201 (316)
T ss_dssp -----EEEEEEETTTTEEEEEET----------TTTEEEEEETT-SCSCEEE
T ss_pred -----ceEEEEeccCCEEEEEEC----------CCCeEEEEecC-CCceEEE
Confidence 689999998887766543 25789999976 5444444
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.44 E-value=3.8e-05 Score=83.11 Aligned_cols=222 Identities=10% Similarity=0.048 Sum_probs=137.1
Q ss_pred EEEEEe------CCCeEEeeecccCcEEEEeecCCccc-----------------------------------------E
Q 011452 107 IVFALA------QSGVCAAFCRETNQRICFLNVTADEV-----------------------------------------I 139 (485)
Q Consensus 107 ~ias~s------~dgtiklW~~~tG~~l~tl~g~~~~~-----------------------------------------i 139 (485)
+|+.++ .+|.+..+|.+||+++=+.... +.. -
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~-~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w 248 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFV-EGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPW 248 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESS-TTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCC
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCC-ccccccccCcccccccccccccCCCccccccccccccccCCcccc
Confidence 676665 3899999999999987654321 000 0
Q ss_pred EEEEEeeCCCEEEEEEeecC-----------------CCCcccceeEEEEeEeccCCcCcccceeeeccc---c------
Q 011452 140 RSLFYNKNNDSLITVSVYAS-----------------DNFSSLRCRSTRIEYIRRGKPDAGFALFESESL---K------ 193 (485)
Q Consensus 140 ~sv~~spdg~~Las~S~d~~-----------------~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~---~------ 193 (485)
.+.+|.|+..+|..++.... ++ +--..+.-+|+.+|+. +|..... .
T Consensus 249 ~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~---~~~~~v~AlD~~TG~~-----~W~~q~~~~d~wd~~~~ 320 (582)
T 1flg_A 249 QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDS---LYTSGQVGVDPSSGEV-----KWFYQHTPNDAWDFSGN 320 (582)
T ss_dssp SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCC---TTCSEEEEECTTTCCE-----EEEEESSTTCCSCCCCC
T ss_pred CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCC---cccceEEEEeCCCCCE-----EEEEeCCCCCcccccCC
Confidence 24678888887776553110 11 1113666778888987 4553211 1
Q ss_pred -CceEEEEeCCCCe---EEEEeeCCCcEEEeecCCCeEEEEEcCC----cEE----------------------------
Q 011452 194 -WPGFVEFDDVNGK---VLTYSAQDSIYKVFDLKNYTMLYSISDK----NVQ---------------------------- 237 (485)
Q Consensus 194 -~~~~V~Fs~pnG~---~Las~s~D~tiKlWdl~~g~~l~tl~~~----~V~---------------------------- 237 (485)
.+-.+.....+|+ +|+.++.++.+.++|.++|+++....-. +..
T Consensus 321 ~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~ 400 (582)
T 1flg_A 321 NELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGK 400 (582)
T ss_dssp CCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCC
T ss_pred CCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCC
Confidence 1112233214784 7888999999999999999998766421 111
Q ss_pred ---------------EEEEcCC-ceEEEEEc------------------------------CCCCeeEEEEecCCCeEEE
Q 011452 238 ---------------EIKISPG-IMLLIFTK------------------------------ASGHVPLKILSIEDGTVLK 271 (485)
Q Consensus 238 ---------------~VafSpg-~~ll~sss------------------------------~~~D~tIklWdi~tG~~L~ 271 (485)
.++|+|. +.+.+... .+.+++|.-||+.||+.+.
T Consensus 401 ~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W 480 (582)
T 1flg_A 401 AVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVW 480 (582)
T ss_dssp CEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEE
T ss_pred ceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEE
Confidence 2455652 23322211 1235889999999999998
Q ss_pred EeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecccCCC-ceEEEEEcCCCcEEEEEe
Q 011452 272 SFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFM-TPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 272 tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~-~v~avaFspdg~llaS~s 339 (485)
+.+.... +..-... ..++.+.+++.|+.|+.+|.+||+.+-.++.... ....++|..||++.+...
T Consensus 481 ~~~~~~~-~~~g~~~-tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 481 EHKEHLP-LWAGVLA-TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp EEEESSC-CCSCCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EecCCCC-CcccceE-eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 8874322 2211111 2367888888999999999999998877654322 222366778887665543
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.43 E-value=0.0004 Score=68.49 Aligned_cols=205 Identities=8% Similarity=0.023 Sum_probs=134.8
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC---CeEEEE-EcC--CcEEEEEEcC-CceEEEEEcCCCCeeEEEEec
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN---YTMLYS-ISD--KNVQEIKISP-GIMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~---g~~l~t-l~~--~~V~~VafSp-g~~ll~sss~~~D~tIklWdi 264 (485)
+..|..++|++.++.+..+....+.|..+++.+ +....+ +.. .....|++.+ ++.+..+... ...|.+.+.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~--~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECC--CCEEEEEeC
Confidence 456778999865678888888889999999876 232222 322 3568899995 7777666443 368999998
Q ss_pred CCCeEEEEe-ecCCcceeEEEEEecCCCEEEEEeCC--CcEEEEECCCCeeEEec-ccCCCceEEEEEcCCC-cEEEEEe
Q 011452 265 EDGTVLKSF-NHLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNFELTEVS-RTEFMTPSAFIFLYEN-QLFLTFR 339 (485)
Q Consensus 265 ~tG~~L~tl-~~~~~~~~~V~f~~~~~~~lls~s~D--~tIkIWDv~tg~~~~~l-~gh~~~v~avaFspdg-~llaS~s 339 (485)
. |+..+++ ......-..+++. |.++.|..+..+ +.|...++. |...+++ ......++.++++|++ +++.+-+
T Consensus 107 ~-g~~~~~~~~~~~~~P~~iavd-p~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 107 K-GVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp T-SSSEEEEEECTTCCEEEEEEE-TTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred C-CCceEEEEECCCCCcceEEeC-CCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEEC
Confidence 5 4444444 3233455688875 567777776533 688888887 4444433 3456689999999865 5556656
Q ss_pred -CCcEEEEeCCCcEEEEeec-C-CCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 340 -NRTVAVWNFRGELVTSFED-H-LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 340 -D~TIklWd~~G~ll~tl~g-H-~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
.+.|...|++|...+++-. . ...+ -.+|++. ++.+.++-.. .+.|...|..+|+.+.++..
T Consensus 184 ~~~~I~~~d~dg~~~~~~~~~~~~~~~----P~giav~-~~~ly~~d~~-----------~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 184 KLHSISSIDVNGGNRKTILEDEKRLAH----PFSLAVF-EDKVFWTDII-----------NEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSS----EEEEEEE-TTEEEEEETT-----------TTEEEEEETTTCCCCEEEEC
T ss_pred CCCeEEEEecCCCceEEEeecCCccCC----cEEEEEE-CCEEEEEECC-----------CCeEEEEeCCCCcceEEEec
Confidence 8899999998765554432 1 1222 4578884 3555555432 58999999889988877754
Q ss_pred C
Q 011452 417 S 417 (485)
Q Consensus 417 H 417 (485)
.
T Consensus 248 ~ 248 (316)
T 1ijq_A 248 N 248 (316)
T ss_dssp S
T ss_pred C
Confidence 3
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.43 E-value=0.00038 Score=69.89 Aligned_cols=182 Identities=11% Similarity=0.097 Sum_probs=123.8
Q ss_pred CCcEEEeecCCCeEEEEEcC-CcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCC
Q 011452 214 DSIYKVFDLKNYTMLYSISD-KNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNE 291 (485)
Q Consensus 214 D~tiKlWdl~~g~~l~tl~~-~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~ 291 (485)
...|+..++.+.+....+.+ .....|+|.+ ++.|..+... .+.|..+++.++.....+.........+++. +.++
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~~~p~glavd-~~~g 128 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGLESPGGLAVD-WVHD 128 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCSCCCEEEEE-TTTT
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEecc--CCceEEEecCCCCceEEEeCCCCCccEEEEe-cCCC
Confidence 45677778876555444443 5688999995 7777766433 3689999987665444343223344578875 4567
Q ss_pred EEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcC-CCcEEEEEe-C-CcEEEEeCCCcEEEEeec-CCCCCCCC
Q 011452 292 KLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFR-N-RTVAVWNFRGELVTSFED-HLLWHPDC 366 (485)
Q Consensus 292 ~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFsp-dg~llaS~s-D-~TIklWd~~G~ll~tl~g-H~~~~~~~ 366 (485)
.|..+ ...+.|.+.++........+......+..+++.| +|.++.+-. + +.|...+++|.....+-. ...+
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~---- 204 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW---- 204 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSC----
T ss_pred eEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC----
Confidence 77666 5778999999986554444445567899999998 566777776 6 889999999876666532 2333
Q ss_pred CeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 367 NTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 367 ~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
-+.|+|+|++..|.-+.. ..+.|...|+. |....++
T Consensus 205 -PnGla~d~~~~~lY~aD~----------~~~~I~~~~~d-G~~~~~~ 240 (349)
T 3v64_C 205 -PNGLTIDYAGRRMYWVDA----------KHHVIERANLD-GSHRKAV 240 (349)
T ss_dssp -EEEEEEETTTTEEEEEET----------TTTEEEEEETT-SCSCEEE
T ss_pred -cceEEEeCCCCEEEEEEC----------CCCEEEEEeCC-CCceEEE
Confidence 689999998777765543 25789999975 4433333
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.41 E-value=3.8e-05 Score=83.32 Aligned_cols=214 Identities=11% Similarity=0.035 Sum_probs=120.8
Q ss_pred EEEEeCCCCeEEEEeeCCC-----------cEEEeecCCCe--EEEEEc---CCcEEEEEEcCCceEEEEEcCCCCeeEE
Q 011452 197 FVEFDDVNGKVLTYSAQDS-----------IYKVFDLKNYT--MLYSIS---DKNVQEIKISPGIMLLIFTKASGHVPLK 260 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D~-----------tiKlWdl~~g~--~l~tl~---~~~V~~VafSpg~~ll~sss~~~D~tIk 260 (485)
.+++.+.+|++++.|+.+. .+.+||+.+++ .+..+. .....++++.+++++++.+..+ +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~-~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND-AKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS-TTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC-CCceE
Confidence 5677633999999998653 68899998876 233332 2334567888877777765433 35899
Q ss_pred EEecCCCeEEEEeecCCccee-EEEEEecCCCEEEEEe-CC-----CcEEEEECCCCeeEEeccc-----CCCceEEEEE
Q 011452 261 ILSIEDGTVLKSFNHLLHRNK-KVDFIEQFNEKLLVKQ-EN-----ENLQILDVRNFELTEVSRT-----EFMTPSAFIF 328 (485)
Q Consensus 261 lWdi~tG~~L~tl~~~~~~~~-~V~f~~~~~~~lls~s-~D-----~tIkIWDv~tg~~~~~l~g-----h~~~v~avaF 328 (485)
+||..+++-...-.-+..+.. .+++. +++..+++|+ .+ .++.+||..+.+....... .... ...++
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~~~~~ 346 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-KQGLY 346 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-TTGGG
T ss_pred EecCcCCceeECCCCCccccccceEEe-cCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-cccee
Confidence 999998765443222223332 34433 4666667777 44 6899999999876554100 0000 00122
Q ss_pred cCCCcEEEEEe----------CCcEEEEeCC-CcEEEEeecCCC-----CCCCCCeeEEEEC-CCCCEEEEEecCCCCCC
Q 011452 329 LYENQLFLTFR----------NRTVAVWNFR-GELVTSFEDHLL-----WHPDCNTNNIYIT-SDQDLIISYCKADSDDP 391 (485)
Q Consensus 329 spdg~llaS~s----------D~TIklWd~~-G~ll~tl~gH~~-----~~~~~~v~svafS-pDG~~LaS~s~d~~~d~ 391 (485)
..++.+++-+. ..++..||.. .+....+..+.. ..+.+ -.++.|. .+|++++.|+.+..++.
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~-~~av~~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC-GNAVMYDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT-CEEEEEETTTTEEEEECCBSSSSSS
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC-CceEeccCCCCeEEEEeCCCCCCCC
Confidence 34444444443 4567889985 544444433321 00111 2455554 48899999875211110
Q ss_pred CCcCCCCeEEEEeCCCCeEEEEe
Q 011452 392 LAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 392 ~~~~~DgtIklWdl~TGk~l~tl 414 (485)
.....-.+|.+||..+.+.....
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEEC
T ss_pred CcCCcceEEEcCCCCCCCeeEEc
Confidence 00000117889999888765443
No 276
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.40 E-value=0.00057 Score=67.68 Aligned_cols=265 Identities=13% Similarity=0.043 Sum_probs=147.2
Q ss_pred cccceEEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEeec---CCcccEEEEEEeeCCCEEEEEEeecCCCCccccee
Q 011452 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNV---TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCR 168 (485)
Q Consensus 94 ~~s~V~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~g---~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~ 168 (485)
....+.+|.|. +..+| .+..|.+ +...+.|+--..+.. .++..+++|+|+| +..+| ++. ..
T Consensus 34 ~~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~---~g------- 99 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGE---PP------- 99 (327)
T ss_dssp CSSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEE---TT-------
T ss_pred CCCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EEC---CC-------
Confidence 34578999997 55555 5667766 333444543222221 1244799999987 44443 332 11
Q ss_pred EEEEeEecc-CCcCcccceeeecc-----ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe---EEEEEcCCcEEEE
Q 011452 169 STRIEYIRR-GKPDAGFALFESES-----LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSISDKNVQEI 239 (485)
Q Consensus 169 t~~lw~i~~-G~~~~~~~lf~~~~-----~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~---~l~tl~~~~V~~V 239 (485)
.+ +.-.+ |+- |+... -..+..|.+. +++++++.+.....+|-+| .|+ .+.......+.++
T Consensus 100 ~i--~~S~DgG~t------W~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~ 168 (327)
T 2xbg_A 100 IM--LHTTDGGQS------WSQIPLDPKLPGSPRLIKAL-GNGSAEMITNVGAIYRTKD--SGKNWQALVQEAIGVMRNL 168 (327)
T ss_dssp EE--EEESSTTSS------CEECCCCTTCSSCEEEEEEE-ETTEEEEEETTCCEEEESS--TTSSEEEEECSCCCCEEEE
T ss_pred eE--EEECCCCCC------ceECccccCCCCCeEEEEEE-CCCCEEEEeCCccEEEEcC--CCCCCEEeecCCCcceEEE
Confidence 11 11122 332 33211 0223457776 4678887765444445555 343 2222223478999
Q ss_pred EEcCCceEEEEEcCCCCeeEEEEec--CCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEecc
Q 011452 240 KISPGIMLLIFTKASGHVPLKILSI--EDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR 317 (485)
Q Consensus 240 afSpg~~ll~sss~~~D~tIklWdi--~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~ 317 (485)
+++|++.+++.+... ...+-+|- ++-+.+.. ........|++. ++ +.+.+.+.++.+.+++...|+.-+.+.
T Consensus 169 ~~~~~~~~~~~g~~G--~~~~S~d~gG~tW~~~~~--~~~~~~~~~~~~-~~-g~~~~~~~~G~~~~s~~D~G~tW~~~~ 242 (327)
T 2xbg_A 169 NRSPSGEYVAVSSRG--SFYSTWEPGQTAWEPHNR--TTSRRLHNMGFT-PD-GRLWMIVNGGKIAFSDPDNSENWGELL 242 (327)
T ss_dssp EECTTSCEEEEETTS--SEEEEECTTCSSCEEEEC--CSSSCEEEEEEC-TT-SCEEEEETTTEEEEEETTEEEEECCCB
T ss_pred EEcCCCcEEEEECCC--cEEEEeCCCCCceeECCC--CCCCccceeEEC-CC-CCEEEEeCCceEEEecCCCCCeeEecc
Confidence 999877666554322 34444442 22233321 223455677774 43 466677778888887644354433221
Q ss_pred -c---CCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCC
Q 011452 318 -T---EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPL 392 (485)
Q Consensus 318 -g---h~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~ 392 (485)
+ +...+.+++|.|++++++.+.+++| ++..+ |+--+.+...... + ..++.|+|.+++++++.+.
T Consensus 243 ~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~-~-~~~~~v~~~~~~~~~~~G~-------- 311 (327)
T 2xbg_A 243 SPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKV-P-SNFYKILFFSPDQGFILGQ-------- 311 (327)
T ss_dssp CTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTS-S-SCCCEEEEEETTEEEEECS--------
T ss_pred CCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCC-C-CCeEEEEEECCCceEEEcC--------
Confidence 1 2345889999999999998888887 56665 7655555422110 0 1167899987777666553
Q ss_pred CcCCCCeEEEEe
Q 011452 393 AEGNAGSINISN 404 (485)
Q Consensus 393 ~~~~DgtIklWd 404 (485)
+|+|.-++
T Consensus 312 ----~G~i~~~~ 319 (327)
T 2xbg_A 312 ----KGILLRYV 319 (327)
T ss_dssp ----TTEEEEEC
T ss_pred ----CceEEEEc
Confidence 58776554
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.39 E-value=3.6e-06 Score=93.18 Aligned_cols=185 Identities=11% Similarity=0.011 Sum_probs=106.5
Q ss_pred ceEEEEeCCCCeEEEEeeC-----CCcEEEeecCCC-eEEE-EEcCCcEEEEEEcCCceEEEEEcCCCC---eeEEEEec
Q 011452 195 PGFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNY-TMLY-SISDKNVQEIKISPGIMLLIFTKASGH---VPLKILSI 264 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~-----D~tiKlWdl~~g-~~l~-tl~~~~V~~VafSpg~~ll~sss~~~D---~tIklWdi 264 (485)
....+||+|||+.||.+.. ..+|+++|+.+| +.+. .+. ....+++|||++..+++.+.+.. ..|.++++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-EECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-CceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 4478896369999997643 236999999999 6321 111 11246889987644444333221 46888899
Q ss_pred CCCeE--EEEeec-CCcceeEEEEEecCCCEEEEEe---CCCcEEEEECCCC--ee--EEecccCCCceEEEEEcCCCcE
Q 011452 265 EDGTV--LKSFNH-LLHRNKKVDFIEQFNEKLLVKQ---ENENLQILDVRNF--EL--TEVSRTEFMTPSAFIFLYENQL 334 (485)
Q Consensus 265 ~tG~~--L~tl~~-~~~~~~~V~f~~~~~~~lls~s---~D~tIkIWDv~tg--~~--~~~l~gh~~~v~avaFspdg~l 334 (485)
.+++. ...+.. .......+.|+ ||+.+|+..+ ....|.++|+.++ +. .....++....+++.|..++++
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKA-ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEEC-TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCchhcEEEEecCCCceEEEEEEC-CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 88752 222321 11234467775 7888888764 3456888899876 34 4444445556677766666766
Q ss_pred EEEEe-C--Cc--EEEEeCC-CcEEEE-eecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 335 FLTFR-N--RT--VAVWNFR-GELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 335 laS~s-D--~T--IklWd~~-G~ll~t-l~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
++... + +. |-++|+. +...+. +-.|.. +..+.++.+. ++.+++++..
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~---~~~l~~~~~~-~~~lv~~~~~ 387 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSE---DVFMESIAVR-SNYLVVAGRR 387 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCS---SEEEEEEEEC-SSEEEEEEEE
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCC---CcEEEEEEEE-CCEEEEEEEe
Confidence 66665 5 33 4445554 232233 333321 1124556554 2345555554
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.36 E-value=9e-05 Score=80.77 Aligned_cols=159 Identities=10% Similarity=-0.027 Sum_probs=98.7
Q ss_pred EEEEeCCCCe---EEEEeeCCCcEEEeecCCCeEEEEEcC-C-----cEEE-EEEcCCceEEEEEcCC---CCeeEEEEe
Q 011452 197 FVEFDDVNGK---VLTYSAQDSIYKVFDLKNYTMLYSISD-K-----NVQE-IKISPGIMLLIFTKAS---GHVPLKILS 263 (485)
Q Consensus 197 ~V~Fs~pnG~---~Las~s~D~tiKlWdl~~g~~l~tl~~-~-----~V~~-VafSpg~~ll~sss~~---~D~tIklWd 263 (485)
.+++++.+|+ .|..++.|+.+.-.|.++|+.+-.... . .+.+ -.+. ++++++..+.. .++.|.-+|
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEE
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEE
Confidence 3566422454 144466799999999999998866531 1 1211 1111 56666543211 257999999
Q ss_pred cCCCeEEEEeecCCcc-------------------------------------ee-EEEEEecCCCEEEEEeCC------
Q 011452 264 IEDGTVLKSFNHLLHR-------------------------------------NK-KVDFIEQFNEKLLVKQEN------ 299 (485)
Q Consensus 264 i~tG~~L~tl~~~~~~-------------------------------------~~-~V~f~~~~~~~lls~s~D------ 299 (485)
.+||+++-++...... ++ ..++. +..+.+..+..+
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d-~~~g~vy~g~g~~~p~~~ 267 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYD-PGTNLIYFGTGNPAPWNE 267 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEE-TTTTEEEEECCCCSCSCG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEe-CCCCEEEEeCCCCccccC
Confidence 9999999887632111 11 22332 456677776543
Q ss_pred ----------CcEEEEECCCCeeEEecc--cCCC-------ceEEEEEc-CCC---cEEEEEe-CCcEEEEeCC-CcEEE
Q 011452 300 ----------ENLQILDVRNFELTEVSR--TEFM-------TPSAFIFL-YEN---QLFLTFR-NRTVAVWNFR-GELVT 354 (485)
Q Consensus 300 ----------~tIkIWDv~tg~~~~~l~--gh~~-------~v~avaFs-pdg---~llaS~s-D~TIklWd~~-G~ll~ 354 (485)
.+|.-+|.+||+.+-... .|.. .+.-+... .+| .+++.++ ++.+-+.|.+ |+++.
T Consensus 268 ~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 268 TMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp GGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 489999999999876543 2321 11222222 578 5777787 9999999995 99987
Q ss_pred Eee
Q 011452 355 SFE 357 (485)
Q Consensus 355 tl~ 357 (485)
..+
T Consensus 348 ~~~ 350 (599)
T 1w6s_A 348 ANK 350 (599)
T ss_dssp EEE
T ss_pred ccc
Confidence 654
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.31 E-value=0.0026 Score=65.18 Aligned_cols=230 Identities=11% Similarity=0.096 Sum_probs=149.5
Q ss_pred CCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCc--Ccccceeeecc
Q 011452 114 SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKP--DAGFALFESES 191 (485)
Q Consensus 114 dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~--~~~~~lf~~~~ 191 (485)
...|+..++++++....+. ....+..|+|.+.++.|.-+. ... +.|...++ .|.. .....+.. ..
T Consensus 91 ~~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD--~~~-------~~I~~~~~-~g~~~~~~~~~~~~-~~ 157 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSD--LSQ-------RMICSTQL-DRAHGVSSYDTVIS-RD 157 (400)
T ss_dssp TTEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEE--TTT-------TEEEEEEC-------CCCEEEEC-SS
T ss_pred cceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEe--cCC-------CeEEEEEc-ccCCCCCcceEEEe-CC
Confidence 3567777777544333332 234688999999877776532 222 35555564 3311 00012333 24
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCe
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGT 268 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~ 268 (485)
+..|..++++..++.+..+.+..+.|.+.+++.......+. ......|++.| ++.+..+.... ...|...++ +|+
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~-~~~I~~~~~-dG~ 235 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGL-NGV 235 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS-SCCEEEEET-TSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC-CCEEEEEeC-CCC
Confidence 56788999986688888888888999999987554333333 24689999998 67776664321 257888887 455
Q ss_pred EEEEe-ecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEecc--cCCCceEEEEEcCCCcEEEEEe-CCcE
Q 011452 269 VLKSF-NHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSR--TEFMTPSAFIFLYENQLFLTFR-NRTV 343 (485)
Q Consensus 269 ~L~tl-~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~--gh~~~v~avaFspdg~llaS~s-D~TI 343 (485)
..+++ ......-..|++. +++++|..+ ...+.|...|+.......+.. +....+.++++ .++.++.+.. .+.|
T Consensus 236 ~~~~~~~~~l~~P~glavd-~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V 313 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLD-LLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAI 313 (400)
T ss_dssp SCEEEECSSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSE
T ss_pred ccEEEEECCCCceEEEEEE-eCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeE
Confidence 54444 3333455688886 567888777 578899999998654444433 23457888888 6678888888 8899
Q ss_pred EEEeC-CCcEEEEeecCC
Q 011452 344 AVWNF-RGELVTSFEDHL 360 (485)
Q Consensus 344 klWd~-~G~ll~tl~gH~ 360 (485)
...|. +|+.+.++....
T Consensus 314 ~~~~~~~G~~~~~i~~~~ 331 (400)
T 3p5b_L 314 FSANRLTGSDVNLLAENL 331 (400)
T ss_dssp EEEESSSCCCCEEEECSC
T ss_pred EEEEcCCCCceEEEecCC
Confidence 99995 698887776443
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.28 E-value=0.00091 Score=68.57 Aligned_cols=206 Identities=8% Similarity=0.027 Sum_probs=136.5
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCC----eEEEEEc--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEec
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g----~~l~tl~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi 264 (485)
+..+..|+|++.++.+..+....+.|+.+++... .....+. -.....||+.+ ++.|..+... .+.|.+.++
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~--~~~I~~~~~ 188 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADT 188 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT--TTEEEEECT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC--CCeEEEEeC
Confidence 5667789999667888888888899999998752 1222222 24678999996 7777776543 368999998
Q ss_pred CCCeEEEEeecCCcceeEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCc-EEEEEe-C
Q 011452 265 EDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQ-LFLTFR-N 340 (485)
Q Consensus 265 ~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s--~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~-llaS~s-D 340 (485)
+.+.....+......-..|++. |.++.|..+. ..+.|...++...............++.++|+|+++ ++.+-+ .
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavd-p~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEE-TTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEEEEeCCCCCcceEEEe-cccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 6544433344334456688876 5567777764 347899999985544444445567899999997655 555555 8
Q ss_pred CcEEEEeCCCcEEEEee-cC-CCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 341 RTVAVWNFRGELVTSFE-DH-LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 341 ~TIklWd~~G~ll~tl~-gH-~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
++|...|++|.-.+++- ++ ...+ -.+|++ ..+.+..+-.. .+.|...|..+|+.+.++..
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~----P~gl~v-~~~~lywtd~~-----------~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAH----PFSLAV-FEDKVFWTDII-----------NEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSS----EEEEEE-ETTEEEEEESS-----------SCSEEEEESSSCCCCEEEEC
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCC----CEEEEE-eCCEEEEecCC-----------CCeEEEEEcCCCCceEEEec
Confidence 89999999876544443 21 1222 346776 23344444332 57899999889988877764
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.28 E-value=0.00063 Score=70.72 Aligned_cols=235 Identities=10% Similarity=0.038 Sum_probs=145.1
Q ss_pred EEEEEec----CEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeE
Q 011452 99 IEIVAAR----DIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEY 174 (485)
Q Consensus 99 ~~i~~s~----~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~ 174 (485)
..|++.. ..|..+...+.|+.++.++|+... +.. .......|+++|+|+.+++ ...+..+ +...++.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~-~~~~P~giavd~dG~lyVa-d~~~~~~------~~gv~~~ 212 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTT-NIGQCADVNFTLNGDMVVV-DDQSSDT------NTGIYLF 212 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECC-CCSCEEEEEECTTCCEEEE-ECCSCTT------SEEEEEE
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eec-CCCCccEEEECCCCCEEEE-cCCCCcc------cceEEEE
Confidence 4667762 556666555889999987676554 433 3445899999999995444 2111111 1222223
Q ss_pred eccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE---cC-CcEEEEEEcCCce-EEE
Q 011452 175 IRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---SD-KNVQEIKISPGIM-LLI 249 (485)
Q Consensus 175 i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl---~~-~~V~~VafSpg~~-ll~ 249 (485)
...+..... ..+. .+.+|..+++++.+|.+.++...++.|..+|..+|+....+ .. ..-..|+|+|++. |.+
T Consensus 213 ~~~~~~~~~-~~~~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 213 TRASGFTER-LSLC--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp CGGGTTCCE-EEEE--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEE
T ss_pred ECCCCeecc-cccc--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEE
Confidence 334433211 1222 35678889998438988888778889999999888763332 12 2334699998654 666
Q ss_pred EEcCCCCeeEEEEecC--CCeE--EEEeecC---------------CcceeEEEEEe-------cCCCEEEEE-eCCCcE
Q 011452 250 FTKASGHVPLKILSIE--DGTV--LKSFNHL---------------LHRNKKVDFIE-------QFNEKLLVK-QENENL 302 (485)
Q Consensus 250 sss~~~D~tIklWdi~--tG~~--L~tl~~~---------------~~~~~~V~f~~-------~~~~~lls~-s~D~tI 302 (485)
+... .+.|..++.. +|+. ..++.+. ...-..++|.. ..++.|.++ ...+.|
T Consensus 290 ad~~--~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I 367 (433)
T 4hw6_A 290 IYNG--KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTV 367 (433)
T ss_dssp EETT--TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEE
T ss_pred EeCC--CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEE
Confidence 6443 3688887754 4532 1233332 11233577731 234566666 578999
Q ss_pred EEEECCCCeeEEecc-----------------cCCCceEEEEEc-CCCcEEEEEe-CCcEEEEeC
Q 011452 303 QILDVRNFELTEVSR-----------------TEFMTPSAFIFL-YENQLFLTFR-NRTVAVWNF 348 (485)
Q Consensus 303 kIWDv~tg~~~~~l~-----------------gh~~~v~avaFs-pdg~llaS~s-D~TIklWd~ 348 (485)
+.+|. +|+...... .....+..+++. ++|.++++-. ++.|+..++
T Consensus 368 ~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 368 RVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 99996 576544331 124569999999 8999999888 888887765
No 282
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.24 E-value=0.00033 Score=70.52 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=86.0
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE--EEEEc-----CCcEEEEEEcCC----ceEEEEEcCCCC---e
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS-----DKNVQEIKISPG----IMLLIFTKASGH---V 257 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~--l~tl~-----~~~V~~VafSpg----~~ll~sss~~~D---~ 257 (485)
+..|..++|+ |||+++++. .++.|++++ +++. +..+. ......|+|+|+ +.+.++.....+ .
T Consensus 30 l~~P~~ia~~-pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFL-PDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEEC-TTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEc-CCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 5678899997 799988875 469999998 5552 23332 246889999997 666665443222 5
Q ss_pred eEEEEecCCCe-----E-EEEee---cCCcceeEEEEEecCCCEEEEE-eCC-------------CcEEEEECCCC----
Q 011452 258 PLKILSIEDGT-----V-LKSFN---HLLHRNKKVDFIEQFNEKLLVK-QEN-------------ENLQILDVRNF---- 310 (485)
Q Consensus 258 tIklWdi~tG~-----~-L~tl~---~~~~~~~~V~f~~~~~~~lls~-s~D-------------~tIkIWDv~tg---- 310 (485)
.|..++...++ . +..+. +..|.-..++|. |++ .|.++ ++. +.|.-+|....
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~-pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFG-PDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEEC-TTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEEC-CCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 67777776542 2 22244 222344689986 566 55554 321 34555555430
Q ss_pred ---------eeEEecccCCCceEEEEEcC-CCcEEEEEe
Q 011452 311 ---------ELTEVSRTEFMTPSAFIFLY-ENQLFLTFR 339 (485)
Q Consensus 311 ---------~~~~~l~gh~~~v~avaFsp-dg~llaS~s 339 (485)
.......|| ..++.++|.| +|+++++-.
T Consensus 184 npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp CTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEE
T ss_pred CcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEc
Confidence 111112233 2478899999 888888766
No 283
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.23 E-value=0.0059 Score=66.50 Aligned_cols=287 Identities=9% Similarity=0.051 Sum_probs=167.7
Q ss_pred ceEEEEEe---cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEe
Q 011452 97 KIIEIVAA---RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (485)
Q Consensus 97 ~V~~i~~s---~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw 173 (485)
....|++. +.+.++-+..+.|...+.+ |....++-...-..-+.|++.|.+..|..+- .+ .. ..|..-
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d-G~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD-~g-~~------~~I~r~ 155 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLD-GSLRKVLFWQELDQPRAIALDPSSGFMYWTD-WG-EV------PKIERA 155 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSCCCCEEEETTTTEEEEEE-CS-SS------CEEEEE
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECC-CCCEEEEEeCCCCCCceEEEecCCCeEEEec-cC-CC------CEEEEE
Confidence 45678886 5566677778999999987 6655555432334568999999766554422 12 11 122222
Q ss_pred EeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--CCcEEEEEEcCCceEEEEE
Q 011452 174 YIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKISPGIMLLIFT 251 (485)
Q Consensus 174 ~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~~~V~~VafSpg~~ll~ss 251 (485)
+ ..|... ..+.. ..+.+|..+++|+.++++..+-+..+.|...|+........+. ...-.+|++..+ .+..+.
T Consensus 156 ~-~dG~~~--~~l~~-~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td 230 (619)
T 3s94_A 156 G-MDGSSR--FIIIN-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTD 230 (619)
T ss_dssp E-TTSCSC--EEEEC-SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEEC
T ss_pred E-CCCCce--EEEEe-CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEec
Confidence 3 355431 12332 3578899999996678888888888899999986543222222 122346777666 554443
Q ss_pred cCCCCeeEEEEecCCCeEEEEeecCCcceeEEEE-------------------------Eec----------CC------
Q 011452 252 KASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDF-------------------------IEQ----------FN------ 290 (485)
Q Consensus 252 s~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f-------------------------~~~----------~~------ 290 (485)
. ....|..-|..+|+.+..+......-..|++ ..| .+
T Consensus 231 ~--~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d 308 (619)
T 3s94_A 231 W--STHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLEN 308 (619)
T ss_dssp T--TTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTT
T ss_pred C--CCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheeccc
Confidence 3 3478888898888876655432211122222 111 10
Q ss_pred --------C-EEEEEeCCCcEEEEECCCCeeE--EecccCCCceEEEEEcC-CCcEEEEEe-CCcEEEEeCCCcEEEEee
Q 011452 291 --------E-KLLVKQENENLQILDVRNFELT--EVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFRGELVTSFE 357 (485)
Q Consensus 291 --------~-~lls~s~D~tIkIWDv~tg~~~--~~l~gh~~~v~avaFsp-dg~llaS~s-D~TIklWd~~G~ll~tl~ 357 (485)
+ .|+.+ ..+.|+..++.+.+.. .........+.+++|.+ ++.++.+-. .+.|.-++.+|....++-
T Consensus 309 ~~~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~ 387 (619)
T 3s94_A 309 GKTCKDGATELLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV 387 (619)
T ss_dssp SSCBCSSCSEEEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CcccCCCCceEEEEE-cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE
Confidence 1 23333 2356777787765421 11112345688999988 677777777 899999999865433433
Q ss_pred cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEec
Q 011452 358 DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIR 415 (485)
Q Consensus 358 gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~ 415 (485)
..... ...++|+.+.+..|.-+.. ..++|.+-++. |+...+|.
T Consensus 388 ~~~~~----~p~GlAvD~~~~~lY~tD~----------~~~~I~v~~~~-G~~~~~l~ 430 (619)
T 3s94_A 388 TAQIA----HPDGIAVDWVARNLYWTDT----------GTDRIEVTRLN-GTMRKILI 430 (619)
T ss_dssp CSSCS----CCCEEEEETTTTEEEEEET----------TTTEEEEEETT-SCSCEEEE
T ss_pred ECCCC----CcCceEEecccCcEEEEeC----------CCCcEEEEeCC-CCeEEEEE
Confidence 22211 1578999975554444332 25889999876 55444554
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.22 E-value=0.0012 Score=65.84 Aligned_cols=226 Identities=15% Similarity=0.123 Sum_probs=144.0
Q ss_pred eEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE---EEEEcCCcEEEEEEcC-
Q 011452 168 RSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM---LYSISDKNVQEIKISP- 243 (485)
Q Consensus 168 ~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~---l~tl~~~~V~~VafSp- 243 (485)
+.|+..++..+.... ..+.. .+..+..|+|++.+|.+..+....+.|..+++.++.. +..-.-.....+++.+
T Consensus 13 ~~I~~i~l~~~~~~~-~~~~~--~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 13 RDLRLVDATNGKENA-TIVVG--GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEETTCTTSCC-EEEEE--EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred CeEEEEECCCCceEE-EEEec--CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 456666653332111 12222 2345568999866788888888889999999886632 1111123567899996
Q ss_pred CceEEEEEcCCCCeeEEEEecCCCeEEEEee-cCCcceeEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeEEecccCC
Q 011452 244 GIMLLIFTKASGHVPLKILSIEDGTVLKSFN-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNFELTEVSRTEF 320 (485)
Q Consensus 244 g~~ll~sss~~~D~tIklWdi~tG~~L~tl~-~~~~~~~~V~f~~~~~~~lls~s--~D~tIkIWDv~tg~~~~~l~gh~ 320 (485)
++.+..+... ...|.+.++. |+..+++. .....-..|++. |.++.|..+. ..+.|...++.............
T Consensus 90 ~g~ly~~d~~--~~~I~~~~~d-G~~~~~l~~~~~~~P~giavd-p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l 165 (318)
T 3sov_A 90 GEKLYWTDSE--TNRIEVSNLD-GSLRKVLFWQELDQPRAIALD-PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI 165 (318)
T ss_dssp TTEEEEEETT--TTEEEEEETT-SCSCEEEECSSCSSEEEEEEE-GGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred CCeEEEEECC--CCEEEEEECC-CCcEEEEEeCCCCCccEEEEe-CCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCC
Confidence 7777666443 3689999985 44444442 333455688876 4567777764 46788888887443333333456
Q ss_pred CceEEEEEcC-CCcEEEEEe-CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCC
Q 011452 321 MTPSAFIFLY-ENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAG 398 (485)
Q Consensus 321 ~~v~avaFsp-dg~llaS~s-D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~Dg 398 (485)
..++.++|+| ++++..+-+ .+.|...|++|.-.+++-.....+ -.+|++..+ .+..+ .. ..+
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~----P~glav~~~-~lywt-d~----------~~~ 229 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPH----PFALTLFED-ILYWT-DW----------STH 229 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSC----EEEEEEETT-EEEEE-ET----------TTT
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCC----ceEEEEeCC-EEEEE-ec----------CCC
Confidence 6899999998 555666666 889999999876555443212222 457777533 44444 32 258
Q ss_pred eEEEEeCCCCeEEEEecC
Q 011452 399 SINISNILTGKCLAKIRA 416 (485)
Q Consensus 399 tIklWdl~TGk~l~tl~g 416 (485)
.|...|..+|+.+.++..
T Consensus 230 ~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 230 SILACNKYTGEGLREIHS 247 (318)
T ss_dssp EEEEEETTTCCSCEEEEC
T ss_pred eEEEEECCCCCceEEEeC
Confidence 999999989987777754
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.001 Score=71.23 Aligned_cols=248 Identities=13% Similarity=0.032 Sum_probs=146.1
Q ss_pred EEEEEe----cCEEEEEeCCCeEEeeecccCcEEEEeecCC---cccEEEEEE-------eeCCCEEEEEEeecCCCCcc
Q 011452 99 IEIVAA----RDIVFALAQSGVCAAFCRETNQRICFLNVTA---DEVIRSLFY-------NKNNDSLITVSVYASDNFSS 164 (485)
Q Consensus 99 ~~i~~s----~~~ias~s~dgtiklW~~~tG~~l~tl~g~~---~~~i~sv~~-------spdg~~Las~S~d~~~d~st 164 (485)
.-++|. +.++++--..+.+++.|.++++.. ++.... -+..+.|+| +++|++|+.+...+.. .
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~-~-- 217 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK-G-- 217 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT-G--
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC-c--
Confidence 355565 334444444577888898855544 443321 235899999 9999977665432211 0
Q ss_pred cceeEEEEeEecc-CCcCc-c-cceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecC-------CCeE-------
Q 011452 165 LRCRSTRIEYIRR-GKPDA-G-FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-------NYTM------- 227 (485)
Q Consensus 165 L~~~t~~lw~i~~-G~~~~-~-~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~-------~g~~------- 227 (485)
...+.+-+.+... |++.. . ...+. ...++..+++++.+|.++++...++.|..+|++ +++.
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred ccCceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 0112233333222 34421 0 01233 246788999985478888888889999999997 5553
Q ss_pred -------EEEEcC-CcEEEEEEcCCce-EEEEEcCCCCeeEEEEe--cCCCeEE--EEeecCC---------------cc
Q 011452 228 -------LYSISD-KNVQEIKISPGIM-LLIFTKASGHVPLKILS--IEDGTVL--KSFNHLL---------------HR 279 (485)
Q Consensus 228 -------l~tl~~-~~V~~VafSpg~~-ll~sss~~~D~tIklWd--i~tG~~L--~tl~~~~---------------~~ 279 (485)
++++.. .+-..|+|+|++. +.++... .+.|+.++ ..+++.. .++.|.. ..
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~--~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN--NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCC--CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 344443 3457899998665 5565433 36788754 4455431 3444321 11
Q ss_pred eeEEEEEe-c-----CCCEEEEE-eCCCcEEEEECCCCeeEEeccc------------------------CCCceEEEEE
Q 011452 280 NKKVDFIE-Q-----FNEKLLVK-QENENLQILDVRNFELTEVSRT------------------------EFMTPSAFIF 328 (485)
Q Consensus 280 ~~~V~f~~-~-----~~~~lls~-s~D~tIkIWDv~tg~~~~~l~g------------------------h~~~v~avaF 328 (485)
-....+.. + .++.|.++ ..++.||.++ .+|... ++.| .+..+..|++
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~-TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVS-TYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEE-EEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred CeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEE-EEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 12133432 1 24466666 6889999999 457543 3322 2457999999
Q ss_pred cCC-CcEEEEEe-CCcEEEEeCCCc-EEEEe
Q 011452 329 LYE-NQLFLTFR-NRTVAVWNFRGE-LVTSF 356 (485)
Q Consensus 329 spd-g~llaS~s-D~TIklWd~~G~-ll~tl 356 (485)
.++ |.++++-+ ++.|+..+++++ ++.-.
T Consensus 452 d~~~g~lyVaD~~N~rIrki~~~~~~~~~~~ 482 (496)
T 3kya_A 452 DDVKEMFYVHDQVGHTIRTISMEQEENVAGD 482 (496)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCCC-----
T ss_pred ECCCCEEEEEeCCCCEEEEEECCCCcccccC
Confidence 997 99999888 899999998754 44433
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.15 E-value=0.00034 Score=74.91 Aligned_cols=262 Identities=11% Similarity=0.113 Sum_probs=152.4
Q ss_pred cccCceEEEEeCC-CCeEEEEeeCCCcEEEeecCCCeEEEEEcC-----CcEEEEEE-------cCCc-eEEEEEcCCC-
Q 011452 191 SLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KNVQEIKI-------SPGI-MLLIFTKASG- 255 (485)
Q Consensus 191 ~~~~~~~V~Fs~p-nG~~Las~s~D~tiKlWdl~~g~~l~tl~~-----~~V~~Vaf-------Spg~-~ll~sss~~~- 255 (485)
.+..|..++|+|. ++.+.++.-..+.|++.|++++.....+.. .....|+| ++++ +++++...+.
T Consensus 137 ~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 137 GFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp CCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred ccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 3567889999841 466666655557788999888776544432 25899999 9754 4665543321
Q ss_pred ---CeeEEEEecCC-Ce--------EEEEeecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECC-------CCee---
Q 011452 256 ---HVPLKILSIED-GT--------VLKSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVR-------NFEL--- 312 (485)
Q Consensus 256 ---D~tIklWdi~t-G~--------~L~tl~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~-------tg~~--- 312 (485)
...|.+.+... |+ .+..+. +-..+++. |+++.|.++ ..++.|..+|+. +++.
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~----~p~giavd-p~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAAYK----QCNGATIH-PINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEEES----CCCCEEEC-TTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred cccCceEEEEecCCCCceeecccceeeccCC----CceEEEEc-CCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 23355665433 23 333332 33466664 656777765 588899999998 6654
Q ss_pred --------EEe--cccCCCceEEEEEcCCCc-EEEEEe-CCcEEEEeCCCc--EE---EEeecC---CCCCCC-------
Q 011452 313 --------TEV--SRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFRGE--LV---TSFEDH---LLWHPD------- 365 (485)
Q Consensus 313 --------~~~--l~gh~~~v~avaFspdg~-llaS~s-D~TIklWd~~G~--ll---~tl~gH---~~~~~~------- 365 (485)
.+. ..+...++..++|+|+|+ ++++-+ .+.|+.++.+|+ .+ .++.|. ..+...
T Consensus 292 ~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f 371 (496)
T 3kya_A 292 IVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARM 371 (496)
T ss_dssp BGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBC
T ss_pred cccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccccccc
Confidence 111 123345789999999999 577767 889999776532 22 455543 111000
Q ss_pred CCee-EEEEC-------CCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCc
Q 011452 366 CNTN-NIYIT-------SDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSC 437 (485)
Q Consensus 366 ~~v~-svafS-------pDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~ 437 (485)
..-. .++.. ++|.+.++=+. ...||..+ .+|+ +.++-|......+ ....+.+
T Consensus 372 ~~P~~gv~vd~~~~~~~~~g~lyVaD~~-----------N~rIr~i~-~~G~-v~TiaG~g~~~~~-~~~~~~G------ 431 (496)
T 3kya_A 372 NNPCQGVFVKNPDYTGEEEYDFYFVDRL-----------NFCVRKVT-PEGI-VSTYAGRGASTSL-ADGNQWG------ 431 (496)
T ss_dssp SSEEEEEEEECTTCCSSCCEEEEEEEGG-----------GTEEEEEC-TTCB-EEEEEESCTTHHH-HHSCSCC------
T ss_pred CCCeEEEEEccccccccCCCeEEEEECC-----------CCEEEEEe-CCCC-EEEEecccccccc-cCccccc------
Confidence 0123 45554 67787776443 58899999 5784 6677664210000 0000000
Q ss_pred cccccccccccccchhcccCCeEEEEEcCC-CCEEEEecCCCcEEEcc
Q 011452 438 NVKKHSHASRIRSTVAEALEDITALFYDED-RNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~l~~V~sl~fspD-g~~LaSgs~DgtVklWd 484 (485)
+.+ . ... .+.-|..-++|+++|+ |..+++=+....||..+
T Consensus 432 ~~d-----G-~~~-~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 432 TDD-----G-DLR-EVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp CCC-----E-ETT-TTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCC-----C-Cch-hhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence 000 0 000 0112346789999997 77777767777887664
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.12 E-value=0.0091 Score=58.98 Aligned_cols=269 Identities=10% Similarity=0.088 Sum_probs=146.1
Q ss_pred cccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeec------cccCceEEEEeCCCCeEEE
Q 011452 136 DEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESE------SLKWPGFVEFDDVNGKVLT 209 (485)
Q Consensus 136 ~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~------~~~~~~~V~Fs~pnG~~La 209 (485)
...+++|+|.+++..+|. +. .. .+ +.....|+- |+.. ...+...|.|+ + +..++
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~---~g-------~i-~~s~DgG~t------W~~~~~~~~~~~~~~~~i~~~-~-~~~~~ 94 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GV---NA-------TL-METRDGGQT------WEPRTLVLDHSDYRFNSVSFQ-G-NEGWI 94 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ET---TT-------EE-EEESSTTSS------CEECCCCCSCCCCEEEEEEEE-T-TEEEE
T ss_pred CCcEEEEEECCCCcEEEE-cC---CC-------eE-EEeCCCCCC------CeECCCCCCCCCccEEEEEec-C-CeEEE
Confidence 446999999988887773 32 22 22 222112321 2221 11234578997 4 56666
Q ss_pred EeeCCCcEEEeecCCCeEEEEEc-----CCcEEEEEEcCCceEEEEEcCCCCeeE-EEEecCCCeEEEEe-ecCCcceeE
Q 011452 210 YSAQDSIYKVFDLKNYTMLYSIS-----DKNVQEIKISPGIMLLIFTKASGHVPL-KILSIEDGTVLKSF-NHLLHRNKK 282 (485)
Q Consensus 210 s~s~D~tiKlWdl~~g~~l~tl~-----~~~V~~VafSpg~~ll~sss~~~D~tI-klWdi~tG~~L~tl-~~~~~~~~~ 282 (485)
.+ .++.|.. .-..|+--..+. ...+..|++.+++.+++.... +.| +-+| .|+--... ..+...+..
T Consensus 95 ~g-~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---g~v~~S~D--gG~tW~~~~~~~~~~~~~ 167 (327)
T 2xbg_A 95 VG-EPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV---GAIYRTKD--SGKNWQALVQEAIGVMRN 167 (327)
T ss_dssp EE-ETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT---CCEEEESS--TTSSEEEEECSCCCCEEE
T ss_pred EE-CCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC---ccEEEEcC--CCCCCEEeecCCCcceEE
Confidence 54 4554433 222343111111 135788888754454444322 333 3333 34432222 233456678
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEC--CCCeeEEecccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecC
Q 011452 283 VDFIEQFNEKLLVKQENENLQILDV--RNFELTEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDH 359 (485)
Q Consensus 283 V~f~~~~~~~lls~s~D~tIkIWDv--~tg~~~~~l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH 359 (485)
++|. +++..++++......+-+|- .+-+.+. .++...+.++++.|++++++.+.++.+.+++.+ |+--+.+..-
T Consensus 168 ~~~~-~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~ 244 (327)
T 2xbg_A 168 LNRS-PSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSP 244 (327)
T ss_dssp EEEC-TTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCT
T ss_pred EEEc-CCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCC
Confidence 8886 44544444445555565663 3334432 244567889999999998887778988888655 6544333211
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccc
Q 011452 360 LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNV 439 (485)
Q Consensus 360 ~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~ 439 (485)
..... ..+.+|++.|++++++.+. +++| ++....|+--..+......
T Consensus 245 ~~~~~-~~~~~v~~~~~~~~~~~g~------------~g~i-~~S~DgG~tW~~~~~~~~~------------------- 291 (327)
T 2xbg_A 245 LRRNS-VGFLDLAYRTPNEVWLAGG------------AGAL-LCSQDGGQTWQQDVDVKKV------------------- 291 (327)
T ss_dssp TSSCC-SCEEEEEESSSSCEEEEES------------TTCE-EEESSTTSSCEECGGGTTS-------------------
T ss_pred cccCC-cceEEEEecCCCEEEEEeC------------CCeE-EEeCCCCcccEEcCccCCC-------------------
Confidence 00110 1278999999999998875 4777 3444445544444321100
Q ss_pred cccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEEcc
Q 011452 440 KKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHVWS 484 (485)
Q Consensus 440 ~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVklWd 484 (485)
-..+++|.|.++++ ++.++.+|+|.-++
T Consensus 292 ----------------~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 292 ----------------PSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp ----------------SSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ----------------CCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 01567888986655 56666789886553
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.10 E-value=0.0052 Score=61.13 Aligned_cols=227 Identities=11% Similarity=0.042 Sum_probs=145.8
Q ss_pred CCeEEeeecccCc--EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeecc
Q 011452 114 SGVCAAFCRETNQ--RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESES 191 (485)
Q Consensus 114 dgtiklW~~~tG~--~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~ 191 (485)
...|+..+++++. ....+.+ -.....|+|.+.++.|.-+- ... +.|..+++..+.. . ..++.. .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~--~~~~~~ld~d~~~~~lyw~D--~~~-------~~I~r~~~~g~~~-~-~~~~~~-~ 77 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG--LEDAAAVDFVFSHGLIYWSD--VSE-------EAIKRTEFNKTES-V-QNVVVS-G 77 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE--EEEEEEEEEEGGGTEEEEEE--TTT-------TEEEEEETTSSSC-C-CEEEEE-C
T ss_pred cCeEEEEECCCCceEEEEEecC--CCccEEEEEEeCCCEEEEEE--CCC-------CcEEEEEccCCCc-e-EEEEcC-C
Confidence 4567777877542 1111222 23467899999777665522 222 3565566433321 0 123332 3
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE-c--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCC
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-S--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDG 267 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl-~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG 267 (485)
+..|..+++++.+|.+..+.+..+.|.+.+++... ...+ . ...-..|++.| ++.+..+... ....|...+. +|
T Consensus 78 l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~-dG 154 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGM-DG 154 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEET-TS
T ss_pred CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEc-CC
Confidence 56788999986688888888888999999986433 2233 2 24678999997 5666665422 2356777776 56
Q ss_pred eEEEEee-cCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEE
Q 011452 268 TVLKSFN-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVA 344 (485)
Q Consensus 268 ~~L~tl~-~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIk 344 (485)
+...++- .....-..++|. +++++|..+ +..+.|...|+..........+....+.++++. ++.++.+-. .+.|.
T Consensus 155 ~~~~~~~~~~l~~Pnglavd-~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~ 232 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLD-YEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSIL 232 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCCccEEEEe-ccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEE
Confidence 5555442 223344688986 567888777 578999999998544444444456788999885 567777877 88999
Q ss_pred EEeC-CCcEEEEeecC
Q 011452 345 VWNF-RGELVTSFEDH 359 (485)
Q Consensus 345 lWd~-~G~ll~tl~gH 359 (485)
..|. +|+.++.+...
T Consensus 233 ~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 233 ACNKYTGEGLREIHSD 248 (318)
T ss_dssp EEETTTCCSCEEEECC
T ss_pred EEECCCCCceEEEeCC
Confidence 9998 58877776543
No 289
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.99 E-value=0.0018 Score=66.55 Aligned_cols=190 Identities=15% Similarity=0.188 Sum_probs=124.8
Q ss_pred EEEeeCCCcEEEeecCCCeEEEEEcCCcEEEEEEcCCce-------EEEEEcCCC--CeeEEEEec--CCCeEEEEeecC
Q 011452 208 LTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIM-------LLIFTKASG--HVPLKILSI--EDGTVLKSFNHL 276 (485)
Q Consensus 208 Las~s~D~tiKlWdl~~g~~l~tl~~~~V~~VafSpg~~-------ll~sss~~~--D~tIklWdi--~tG~~L~tl~~~ 276 (485)
+.....++-+.|+|+ +|+.+..+....++.|..-|+-. ++.. +... +++|.|+++ .+++ |+.+..-
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~a-s~R~~~~n~l~vf~iDp~~~~-l~~i~~~ 119 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAA-SNRSEGKNTIEIYAIDGKNGT-LQSMTDP 119 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEE-EECSTTCCEEEEEEECTTTCC-EEECSCT
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEE-eCCCCCCCeEEEEEECCCCCc-eeecccc
Confidence 333445678999999 89999999877777777777432 3333 3333 589999966 5665 6666321
Q ss_pred -------CcceeEEEEE-ecCCC--EEEEEeCCCcEEEEEC-------CCCeeEEecccCCCceEEEEEcCCCcEEEEEe
Q 011452 277 -------LHRNKKVDFI-EQFNE--KLLVKQENENLQILDV-------RNFELTEVSRTEFMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 277 -------~~~~~~V~f~-~~~~~--~lls~s~D~tIkIWDv-------~tg~~~~~l~gh~~~v~avaFspdg~llaS~s 339 (485)
......+++- .+..+ ++.+...++.+..|++ .++++++.+.- ...+..++..++...|.-+-
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~e 198 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAE 198 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEE
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEec
Confidence 1334456662 24333 4666778899999988 23466666643 34788888888777666666
Q ss_pred -CCcEEEEeCC------CcEEEEee-cCCCCCCCCCeeEEEE--CCCCC-EEEEEecCCCCCCCCcCCCCeEEEEeCC-C
Q 011452 340 -NRTVAVWNFR------GELVTSFE-DHLLWHPDCNTNNIYI--TSDQD-LIISYCKADSDDPLAEGNAGSINISNIL-T 407 (485)
Q Consensus 340 -D~TIklWd~~------G~ll~tl~-gH~~~~~~~~v~svaf--SpDG~-~LaS~s~d~~~d~~~~~~DgtIklWdl~-T 407 (485)
|.-|-.++.+ ++++..+. +|... + +..|++ .+||+ ||+.+|.. +++.-++|.+ +
T Consensus 199 Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~a--D--vEGLai~~~~~g~gyLivSsQG----------~~s~~Vydr~~~ 264 (355)
T 3amr_A 199 EDEAIWKFSAEPDGGSNGTVIDRADGRHLTR--D--IEGLTIYYAADGKGYLMASSQG----------NSSYAIYDRQGK 264 (355)
T ss_dssp TTTEEEEEECSTTSCSCCEEEEEBSSSSBCS--C--EEEEEEEECGGGCEEEEEEEGG----------GTEEEEEESSTT
T ss_pred ccceEEEEeCCcCCCCCceEEEEecCCcccc--C--cceEEEEecCCCCEEEEEEcCC----------CCEEEEEECCCC
Confidence 7544333433 34666553 33322 1 677887 77877 77777752 5899999996 7
Q ss_pred CeEEEEec
Q 011452 408 GKCLAKIR 415 (485)
Q Consensus 408 Gk~l~tl~ 415 (485)
.+.+..|.
T Consensus 265 ~~~vg~f~ 272 (355)
T 3amr_A 265 NKYVADFR 272 (355)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEE
Confidence 88888885
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.97 E-value=0.0036 Score=70.46 Aligned_cols=206 Identities=8% Similarity=0.030 Sum_probs=136.4
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCC----eEEEEEc--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEec
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g----~~l~tl~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi 264 (485)
+..+..|+|+..++.+..+....+.|+.+++... .....+. -.....||+.+ ++.|..+... .+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~--~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEET
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC--CCeEEEEeC
Confidence 5667789998668888888888899999998753 2122222 24577899996 6677776543 379999998
Q ss_pred CCCeEEEEee-cCCcceeEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeEEecccCCCceEEEEEcCC-CcEEEEEe-
Q 011452 265 EDGTVLKSFN-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE-NQLFLTFR- 339 (485)
Q Consensus 265 ~tG~~L~tl~-~~~~~~~~V~f~~~~~~~lls~s--~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspd-g~llaS~s- 339 (485)
. |+..+++- ..+..-..|++. |.++.|..+- ....|...++..............+++.+++.|. ++++++-.
T Consensus 501 d-G~~~~~l~~~~l~~P~gIaVD-p~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 501 K-GVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp T-SSSEEEEEECTTCCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred C-CCeEEEEEeCCCCCcceEEEe-cCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 5 55555553 334556788886 5567777764 3378999999855554445555679999999965 55566655
Q ss_pred CCcEEEEeCCCcEEEEe-ecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 340 NRTVAVWNFRGELVTSF-EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 340 D~TIklWd~~G~ll~tl-~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
...|...|++|..++++ .++..+ ..-.+|++ +++.|.-+.. ..++|..-|..+|+-+.+|..
T Consensus 579 ~~~I~~~d~dG~~~~~v~~~~~~l---~~P~glav--~~~~lYwtD~----------~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 579 LHSISSIDVNGGNRKTILEDEKRL---AHPFSLAV--FEDKVFWTDI----------INEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp TTEEEEEETTSCSCEEEEECTTTT---SSEEEEEE--ETTEEEEEET----------TTTEEEEEETTTCCCCEEEEC
T ss_pred CCcEEEEecCCCceEEEecCCCcc---CCCCEEEE--eCCEEEEEEC----------CCCEEEEEeCCCCcceEEeec
Confidence 78999999987655444 332222 01346666 4445544432 258888888889988777754
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.94 E-value=0.018 Score=64.83 Aligned_cols=228 Identities=11% Similarity=0.085 Sum_probs=144.7
Q ss_pred CCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcC--cccceeeecc
Q 011452 114 SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD--AGFALFESES 191 (485)
Q Consensus 114 dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~--~~~~lf~~~~ 191 (485)
...|+..++..++... +.. ....+..|+|.+.++.|..+. ... +.|...++. |... ....++. ..
T Consensus 403 ~~~Ir~i~l~~~~~~~-l~~-~~~~~~gl~~d~~~~~lY~sD--~~~-------~~I~~~~l~-g~~~~~~~~~vi~-~~ 469 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTS-LIP-NLRNVVALDTEVASNRIYWSD--LSQ-------RMICSTQLD-RAHGVSSYDTVIS-RD 469 (791)
T ss_dssp BSSEEEECTTSCCCEE-EEC-SCSSEEEEEEETTTTEEEEEE--TTT-------TEEEEEEC---------CEEEEC-SS
T ss_pred ccceeEeeccCCccee-eec-CCCceEEEeecccCCeeEEee--ccc-------eeEEEEecc-CCCCCcceeEEEe-cC
Confidence 3456666666444333 322 234578999999777665532 222 355555643 3110 0122333 24
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE-c--CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCC
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-S--DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDG 267 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl-~--~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG 267 (485)
+..|..|+++...+.+..+.+..+.|.+.++.... ..++ . ......||+.| ++.|..+... ....|...++ +|
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~-dG 546 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGL-NG 546 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEET-TS
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCC-CCCeEEEEec-CC
Confidence 67788999996667888888889999999987543 3333 2 24688999997 5676666432 2257888887 56
Q ss_pred eEEEEee-cCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEeccc--CCCceEEEEEcCCCcEEEEEe-CCc
Q 011452 268 TVLKSFN-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRT--EFMTPSAFIFLYENQLFLTFR-NRT 342 (485)
Q Consensus 268 ~~L~tl~-~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~g--h~~~v~avaFspdg~llaS~s-D~T 342 (485)
...+++- ..+.+-..|++. +.+++|..+ ...+.|...|+.......++.+ ....+.++++ .+++++++-. .+.
T Consensus 547 ~~~~~lv~~~l~~P~GLavD-~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav-~~~~lYwtD~~~~~ 624 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLD-LLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEA 624 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE-ETTEEEEEETTTTE
T ss_pred CceEEEEeCCCCCceEEEEe-cCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE-eCCEEEEEECCCCE
Confidence 6555553 333456688885 557788777 5778999999986554444433 3456778877 4557888877 889
Q ss_pred EEEEeC-CCcEEEEeecC
Q 011452 343 VAVWNF-RGELVTSFEDH 359 (485)
Q Consensus 343 IklWd~-~G~ll~tl~gH 359 (485)
|..-|. +|+.+.++...
T Consensus 625 I~~~dk~tG~~~~~l~~~ 642 (791)
T 3m0c_C 625 IFSANRLTGSDVNLLAEN 642 (791)
T ss_dssp EEEEETTTCCCCEEEECS
T ss_pred EEEEeCCCCcceEEeecC
Confidence 988886 58776666543
No 292
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.89 E-value=0.0088 Score=60.35 Aligned_cols=142 Identities=10% Similarity=0.100 Sum_probs=85.3
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe-EEEEEc-----CCcEEEEEEcCC----ceEEEEEcC-CCC----
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS-----DKNVQEIKISPG----IMLLIFTKA-SGH---- 256 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~-~l~tl~-----~~~V~~VafSpg----~~ll~sss~-~~D---- 256 (485)
+.+|..++|+ |||+++++.. ++.|+++| .+|+ .+..+. ......|+|+|+ +.+.++.+. ..+
T Consensus 28 l~~P~~ia~~-pdG~l~V~e~-~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPL-GGGRYLVTER-PGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEE-ETTEEEEEET-TTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEc-CCCeEEEEeC-CCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 5678899998 7999888754 58898888 4665 333322 246899999986 677665432 122
Q ss_pred eeEEEEecCCC-------eEE-EEee-cCCcceeEEEEEecCCCEEEEE-eCC-------------CcEEEEECCCC---
Q 011452 257 VPLKILSIEDG-------TVL-KSFN-HLLHRNKKVDFIEQFNEKLLVK-QEN-------------ENLQILDVRNF--- 310 (485)
Q Consensus 257 ~tIklWdi~tG-------~~L-~tl~-~~~~~~~~V~f~~~~~~~lls~-s~D-------------~tIkIWDv~tg--- 310 (485)
..|-.++...+ +.+ ..+. +..|.-..++|. |++ +|.++ +.. +.|.-.|....
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~-pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~ 182 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFG-PDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPA 182 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEEC-TTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEEC-CCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCC
Confidence 45666776554 122 2243 222344679986 556 45554 321 34444455422
Q ss_pred -----eeEEecccCCCceEEEEEcC-CCcEEEEEe
Q 011452 311 -----ELTEVSRTEFMTPSAFIFLY-ENQLFLTFR 339 (485)
Q Consensus 311 -----~~~~~l~gh~~~v~avaFsp-dg~llaS~s 339 (485)
.......||. .++.++|.| +|+++++-.
T Consensus 183 ~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 183 DNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEec
Confidence 0111122443 577899999 899888765
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.83 E-value=0.031 Score=60.95 Aligned_cols=227 Identities=12% Similarity=0.120 Sum_probs=149.0
Q ss_pred CCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccc
Q 011452 113 QSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESL 192 (485)
Q Consensus 113 ~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~ 192 (485)
..+.|+.-++++.+....+....-.....|+|.+.++.|.-+. ... +.|...++ .|... ..++.. .+
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD--~~~-------~~I~r~~~-~g~~~--~~v~~~-g~ 79 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTD--ISL-------KTISRAFM-NGSAL--EHVVEF-GL 79 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEE--TTT-------TEEEEEET-TSCSC--EEEECS-SC
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEE--CCC-------CeEEEEEC-CCCCc--EEEEeC-CC
Confidence 4566777777755433333322223578999999888776533 222 35555554 44321 123333 34
Q ss_pred cCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE--c-CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCe
Q 011452 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI--S-DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGT 268 (485)
Q Consensus 193 ~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl--~-~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~ 268 (485)
..|..+++|..+|++..+....+.|.+-+++.... .++ . -..-..|++.| ++.+..+... ....|...++ +|.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~-dG~ 156 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAM-DGS 156 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEET-TSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeC-CCC
Confidence 57889999977788888888889999999865432 222 1 24678999998 6777666432 1256777776 455
Q ss_pred EEEEeecCCcceeEEEEEecCCCEEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEE
Q 011452 269 VLKSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVW 346 (485)
Q Consensus 269 ~L~tl~~~~~~~~~V~f~~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklW 346 (485)
....+-....+-..|++. +++++|..+ ...+.|...|+..+.. +++......+.++++.. +.++.|-. .+.|..-
T Consensus 157 ~~~~l~~~~~~P~GlalD-~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 157 ERTTLVPNVGRANGLTID-YAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERA 233 (628)
T ss_dssp SCEEEECSCSSEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred ceEEEECCCCCcceEEEc-cccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEE
Confidence 555544334555688886 567888887 5788999999986544 55555666788998864 78888888 8999999
Q ss_pred eC-CCcEEEEeec
Q 011452 347 NF-RGELVTSFED 358 (485)
Q Consensus 347 d~-~G~ll~tl~g 358 (485)
|. +|+..+.+..
T Consensus 234 dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 234 NKTSGQNRTIIQG 246 (628)
T ss_dssp ETTTCCSCEEEEC
T ss_pred ECCCCCceEEEec
Confidence 96 5775555543
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.78 E-value=0.02 Score=62.50 Aligned_cols=177 Identities=10% Similarity=0.058 Sum_probs=122.1
Q ss_pred CCCcEEEeecCCCeEEEEEc--C-CcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEec
Q 011452 213 QDSIYKVFDLKNYTMLYSIS--D-KNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQ 288 (485)
Q Consensus 213 ~D~tiKlWdl~~g~~l~tl~--~-~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~ 288 (485)
....|+.-|+++......+. + ..+..|+|.+ ++.+..+.. ..+.|..+++..+.....+..-......+++. +
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~--~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD-~ 89 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI--SLKTISRAFMNGSALEHVVEFGLDYPEGMAVD-W 89 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCSCCCEEEEE-T
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC--CCCeEEEEECCCCCcEEEEeCCCCCcceEEEE-e
Confidence 45678888888655433333 3 4788999997 677666643 34789999986544433343223445677774 4
Q ss_pred CCCEEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcC-CCcEEEEEe--CCcEEEEeCCCcEEEEeecCCCCCC
Q 011452 289 FNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFR--NRTVAVWNFRGELVTSFEDHLLWHP 364 (485)
Q Consensus 289 ~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFsp-dg~llaS~s--D~TIklWd~~G~ll~tl~gH~~~~~ 364 (485)
.++.|..+ ...+.|.+-|+...............+.++++.| +|.++.|-. ...|...+++|.....+-....+
T Consensus 90 ~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~-- 167 (628)
T 4a0p_A 90 LGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGR-- 167 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSS--
T ss_pred CCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCC--
Confidence 46777776 5788999999985543333335667899999998 688888764 56788888887766665544445
Q ss_pred CCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCC
Q 011452 365 DCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILT 407 (485)
Q Consensus 365 ~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~T 407 (485)
-+.|+++++++.|.-+.. ..+.|...|+..
T Consensus 168 ---P~GlalD~~~~~LY~aD~----------~~~~I~~~d~dG 197 (628)
T 4a0p_A 168 ---ANGLTIDYAKRRLYWTDL----------DTNLIESSNMLG 197 (628)
T ss_dssp ---EEEEEEETTTTEEEEEET----------TTTEEEEEETTS
T ss_pred ---cceEEEccccCEEEEEEC----------CCCEEEEEcCCC
Confidence 689999998887776643 257899999764
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.73 E-value=0.00013 Score=80.65 Aligned_cols=205 Identities=8% Similarity=0.054 Sum_probs=129.8
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCC----CeEEEEEcC--CcEEEEEEcC-CceEEEEEcCCCCeeEEEEec
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----YTMLYSISD--KNVQEIKISP-GIMLLIFTKASGHVPLKILSI 264 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~----g~~l~tl~~--~~V~~VafSp-g~~ll~sss~~~D~tIklWdi 264 (485)
+..+..|+|++.++.+..+....+.|+.+++.+ ......+.. .....||+.+ ++.|..+.. ..+.|.+.++
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~--~~~~I~v~d~ 482 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVADT 482 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT--TTSCEEEEBS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec--cCCeEEEEec
Confidence 455678999855677777767788999999875 122122211 2456789984 666665532 3478999998
Q ss_pred CCCeEEEEe-ecCCcceeEEEEEecCCCEEEEEe--CCCcEEEEECCCCeeEEecccCCCceEEEEEcCC-CcEEEEEe-
Q 011452 265 EDGTVLKSF-NHLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE-NQLFLTFR- 339 (485)
Q Consensus 265 ~tG~~L~tl-~~~~~~~~~V~f~~~~~~~lls~s--~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspd-g~llaS~s- 339 (485)
.. ..++++ ......-..|++. |.++.|..+. ..+.|...++...............++.++|+|+ ++++++-+
T Consensus 483 dg-~~~~~l~~~~~~~P~giavD-p~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 483 KG-VKRKTLFREQGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp SS-CCEEEECCCSSCCCCCEECC-SSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred CC-CceEEEEeCCCCCcceEEEc-cCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 54 444444 3223444577764 5566676654 2378888888744333333344568999999986 56666666
Q ss_pred CCcEEEEeCCCcEEEEeec--CCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 340 NRTVAVWNFRGELVTSFED--HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 340 D~TIklWd~~G~ll~tl~g--H~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
.++|...|++|.-.+++.. ....+| .+|++..+ .++++... .+.|...|..+|+.+.+|..
T Consensus 561 ~~~I~~~d~dG~~~~~~~~~~~~~~~P----~glavd~~-~lywtd~~-----------~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTILEDEKRLAHP----FSLAVFED-KVFWTDII-----------NEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp TTEEEEECSSSSCCEEECCCSSSCSSC----CCCEEETT-EEEEECST-----------TTCEEEEETTTEEEEECCCT
T ss_pred CCeEEEEccCCCceEEEEecCCcCCCc----eEeEEECC-EEEEEeCC-----------CCeEEEEEccCCCceEEeec
Confidence 8899999998765444432 112222 35566444 34444322 58999999999999988854
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.70 E-value=0.0072 Score=65.87 Aligned_cols=205 Identities=14% Similarity=0.112 Sum_probs=132.1
Q ss_pred ccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE-EEEEc-C-CcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCC
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM-LYSIS-D-KNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDG 267 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~-l~tl~-~-~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG 267 (485)
+..+..|+|++.+|.+..+-...+.|..++++.... ...+. + .....+|+.+ ++.+..+... .+.|.+-++. |
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~--~~~I~v~~~d-G 115 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE--TNRIEVSNLD-G 115 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETT--TTEEEEEETT-S
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCC--CCEEEEEECC-C
Confidence 556778999976888888877788999999876532 22333 2 5789999997 7777776543 3789999985 5
Q ss_pred eEEEEee-cCCcceeEEEEEecCCCEEEEEeC--CCcEEEEECCCCeeEEecccCCCceEEEEEcCC-CcEEEEEe-CCc
Q 011452 268 TVLKSFN-HLLHRNKKVDFIEQFNEKLLVKQE--NENLQILDVRNFELTEVSRTEFMTPSAFIFLYE-NQLFLTFR-NRT 342 (485)
Q Consensus 268 ~~L~tl~-~~~~~~~~V~f~~~~~~~lls~s~--D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspd-g~llaS~s-D~T 342 (485)
+..+++- ..+..-..|++. |.+++|..+.. ...|..-++..............+++.+++.|+ ++++.+-. .+.
T Consensus 116 ~~~~~l~~~~l~~P~~Iavd-p~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~ 194 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALD-PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF 194 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCCCceEEEe-cCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe
Confidence 5544443 444556688886 55677777753 456666677744433333345668999999985 55556655 889
Q ss_pred EEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 343 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 343 IklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
|...|++|.-.+.+-.....|| .+|++..| .|.-+.. ..++|..-|..||+.+..+..
T Consensus 195 I~~~~~dG~~~~~~~~~~~~~P----~gi~~~~~--~ly~td~----------~~~~V~~~d~~tg~~~~~i~~ 252 (619)
T 3s94_A 195 IHKSNLDGTNRQAVVKGSLPHP----FALTLFED--ILYWTDW----------STHSILACNKYTGEGLREIHS 252 (619)
T ss_dssp EEEESSSCCEEC---------C----CCEEESSS--EEEEECT----------TTCSEEEEESSSCCCCEECCS
T ss_pred EEEecCCCCccEEEEeCCCCCc----eEEEEeCC--EEEEecC----------CCCEEEEEECCCCcccEEEec
Confidence 9999998765554432122333 36777666 4443332 257899999888887666543
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.70 E-value=0.00011 Score=81.22 Aligned_cols=183 Identities=10% Similarity=0.054 Sum_probs=115.1
Q ss_pred CCCcEEEeecCCCeEEEEEc-CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCC----CeEEEEeecCCcceeEEEEE
Q 011452 213 QDSIYKVFDLKNYTMLYSIS-DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIED----GTVLKSFNHLLHRNKKVDFI 286 (485)
Q Consensus 213 ~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~t----G~~L~tl~~~~~~~~~V~f~ 286 (485)
....|++-++.+.+....+. ...+..|+|++ +++|..+.. ....|+.+++.+ ......+.........|++.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~--~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCT--TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEec--CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 45678888888766544443 24677899997 667665532 336888888865 12222221112233456653
Q ss_pred ecCCCEEEEE-eCCCcEEEEECCCCeeEEecccCCCceEEEEEcCC-CcEEEEEe-C-CcEEEEeCCCcEEEEeecC-CC
Q 011452 287 EQFNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE-NQLFLTFR-N-RTVAVWNFRGELVTSFEDH-LL 361 (485)
Q Consensus 287 ~~~~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspd-g~llaS~s-D-~TIklWd~~G~ll~tl~gH-~~ 361 (485)
+.++.|..+ ...++|.+.|+........+......+..+++.|+ |.++.+-. . ++|...+++|...+.+-.. ..
T Consensus 462 -~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 462 -WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp -CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS
T ss_pred -eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC
Confidence 335666665 57789999999866555555445567899999985 56666654 4 7888888887765555322 23
Q ss_pred CCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEe
Q 011452 362 WHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKI 414 (485)
Q Consensus 362 ~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl 414 (485)
+ -+.|+|+|+++.|.-+.. ..+.|...|+. |.-..++
T Consensus 541 ~-----PnGlavd~~~~~LY~aD~----------~~~~I~~~d~d-G~~~~~~ 577 (699)
T 1n7d_A 541 W-----PNGITLDLLSGRLYWVDS----------KLHSISSIDVN-GGNRKTI 577 (699)
T ss_dssp S-----CCCEEECTTTCCEEEEET----------TTTEEEEECSS-SSCCEEE
T ss_pred C-----ccEEEEeccCCEEEEEec----------CCCeEEEEccC-CCceEEE
Confidence 3 568999998766655432 25789999976 4444444
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.68 E-value=0.012 Score=59.14 Aligned_cols=220 Identities=10% Similarity=0.098 Sum_probs=119.7
Q ss_pred cEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCc--ccceeeeccccCceEEEEeCCC----CeEEEEe
Q 011452 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDA--GFALFESESLKWPGFVEFDDVN----GKVLTYS 211 (485)
Q Consensus 138 ~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~--~~~lf~~~~~~~~~~V~Fs~pn----G~~Las~ 211 (485)
.-+.++|.|||..+++ . . . ..|.+.+ .|+... ..+++.. ....+..|+|+ || |.+.++.
T Consensus 32 ~P~~ia~~pdG~l~V~--e-~-~-------g~I~~i~--~g~~~~~~~~~v~~~-g~~~p~gia~~-pdf~~~g~lYv~~ 96 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA--E-R-P-------GRIRLFR--EGRLSTYAELSVYHR-GESGLLGLALH-PRFPQEPYVYAYR 96 (352)
T ss_dssp CEEEEEECTTSCEEEE--E-T-T-------TEEEEEE--TTEEEEEEECCCCCS-TTCSEEEEEEC-TTTTTSCEEEEEE
T ss_pred CceEEEEcCCCeEEEE--e-C-C-------CeEEEEE--CCCccEeecceEeec-CCCCceeEEEC-CCCCCCCEEEEEE
Confidence 3589999999997665 1 1 1 2444444 554310 0111211 23456789998 55 7776665
Q ss_pred eCC-----CcEEEeecCCCe-----EEEE-Ec-----CCcEEEEEEcCCceEEEEEcCCCC-----------eeEEEEec
Q 011452 212 AQD-----SIYKVFDLKNYT-----MLYS-IS-----DKNVQEIKISPGIMLLIFTKASGH-----------VPLKILSI 264 (485)
Q Consensus 212 s~D-----~tiKlWdl~~g~-----~l~t-l~-----~~~V~~VafSpg~~ll~sss~~~D-----------~tIklWdi 264 (485)
+.+ ..|..+++.+++ .+.+ +. .+.-..++|.|++.|.++..+..+ +.|.-.+.
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 97 TVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp EECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred ecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 543 567778877542 2332 43 145578999998888877432211 23333343
Q ss_pred CCCe-------------EEEEee-cCCcceeEEEEEecCCCEEEEEe--CCC-------cEEEEECCCCe----------
Q 011452 265 EDGT-------------VLKSFN-HLLHRNKKVDFIEQFNEKLLVKQ--ENE-------NLQILDVRNFE---------- 311 (485)
Q Consensus 265 ~tG~-------------~L~tl~-~~~~~~~~V~f~~~~~~~lls~s--~D~-------tIkIWDv~tg~---------- 311 (485)
+|+ ....+. +| ..-..++|. ++++.|.++. .+. .|.+. ..|.
T Consensus 177 -dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d-~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~ 251 (352)
T 2ism_A 177 -EGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWH-PKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGR 251 (352)
T ss_dssp -TSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEEC-TTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSC
T ss_pred -CCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEE-CCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCC
Confidence 231 111111 22 234578886 4344555542 332 23332 2222
Q ss_pred --------eEEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEeCC--CcE-----EEEeecCCCCCCCCCeeEEEECC
Q 011452 312 --------LTEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR--GEL-----VTSFEDHLLWHPDCNTNNIYITS 375 (485)
Q Consensus 312 --------~~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd~~--G~l-----l~tl~gH~~~~~~~~v~svafSp 375 (485)
.+..+ .+...+..++| ++|.++++.- .+.|..-+++ +.. ...+-+- + ..+.+|++.|
T Consensus 252 ~~~~~~~~p~~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~--~---~rp~~v~~~p 324 (352)
T 2ism_A 252 GNDPRYRDPLYFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSG--F---GRLREVQVGP 324 (352)
T ss_dssp CCCTTSCCCSEEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEES--S---CCEEEEEECT
T ss_pred CCCCCCcCCeEec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheeccc--C---CCeeEEEECC
Confidence 12222 23346788888 7899888776 7777777774 321 1222211 1 2378999999
Q ss_pred CCCEEEEEe
Q 011452 376 DQDLIISYC 384 (485)
Q Consensus 376 DG~~LaS~s 384 (485)
||.+.++..
T Consensus 325 dG~lyv~~~ 333 (352)
T 2ism_A 325 DGALYVTTS 333 (352)
T ss_dssp TSCEEEEEC
T ss_pred CCcEEEEEe
Confidence 999988864
No 299
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.61 E-value=0.027 Score=55.00 Aligned_cols=186 Identities=11% Similarity=0.154 Sum_probs=117.4
Q ss_pred ceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEEc--C-CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCe---
Q 011452 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--D-KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGT--- 268 (485)
Q Consensus 195 ~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~--~-~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~--- 268 (485)
+..++|++.++.+.|....++.|-.-|+. |+.+.++. + .....|++.+++.++++.. .+..+.+.++....
T Consensus 29 lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E--~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDE--RDYAIYVISLTPNSEVK 105 (255)
T ss_dssp EEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEET--TTTEEEEEEECTTCCEE
T ss_pred cceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEEC--CCCcEEEEEcCCCCeee
Confidence 45799984445566556668888888887 88888874 2 4788899998777777643 33678888765433
Q ss_pred EEEEee-cC--Cc---ceeEEEEEecCCCEEEEEeCCCcEEEEECC---CCeeEEec-------ccCCCceEEEEEcCCC
Q 011452 269 VLKSFN-HL--LH---RNKKVDFIEQFNEKLLVKQENENLQILDVR---NFELTEVS-------RTEFMTPSAFIFLYEN 332 (485)
Q Consensus 269 ~L~tl~-~~--~~---~~~~V~f~~~~~~~lls~s~D~tIkIWDv~---tg~~~~~l-------~gh~~~v~avaFspdg 332 (485)
.+.... .+ .. ....+++. +.+++|.++.+-....||.++ ++..+..+ ..+...+.+++|.|..
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d-~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYS-RQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEE-TTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeccccccccccCCcceEEEe-CCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 233332 11 11 12489987 557788887655566666654 12122222 1134467899998865
Q ss_pred c-EEEEEe-CCcEEEEeCCCcEEEEeecC----CCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 333 Q-LFLTFR-NRTVAVWNFRGELVTSFEDH----LLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 333 ~-llaS~s-D~TIklWd~~G~ll~tl~gH----~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
. +++.+. .+.+-..|.+|+.+..+.=. .+...-..-..|+|.|+|.+.++ |.
T Consensus 185 g~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE 242 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SE 242 (255)
T ss_dssp TEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ET
T ss_pred CeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cC
Confidence 4 444444 88999999999976654311 11100011479999999998887 43
No 300
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.54 E-value=0.021 Score=55.76 Aligned_cols=185 Identities=14% Similarity=0.162 Sum_probs=115.4
Q ss_pred ccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCc
Q 011452 137 EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI 216 (485)
Q Consensus 137 ~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~t 216 (485)
+.+-.|+|+|++++|.+++. .++ .+-.-|. +|+.....++ .-..-+..|++. ++|.++++.-.++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d--~~~-------~I~~ld~-~g~v~~~i~l---~g~~D~EGIa~~-~~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTIN--KPA-------AIVEMTT-NGDLIRTIPL---DFVKDLETIEYI-GDNQFVISDERDYA 92 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEE--TTE-------EEEEEET-TCCEEEEEEC---SSCSSEEEEEEC-STTEEEEEETTTTE
T ss_pred cCcceeEEeCCCCEEEEEEC--CCC-------eEEEEeC-CCCEEEEEec---CCCCChHHeEEe-CCCEEEEEECCCCc
Confidence 35999999999999988774 232 3434454 4776332221 112345679997 78888777656788
Q ss_pred EEEeecCCCeE---EEEE--c------CCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecC---CCeEEEEee-------
Q 011452 217 YKVFDLKNYTM---LYSI--S------DKNVQEIKISP-GIMLLIFTKASGHVPLKILSIE---DGTVLKSFN------- 274 (485)
Q Consensus 217 iKlWdl~~g~~---l~tl--~------~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~---tG~~L~tl~------- 274 (485)
+-+.++..... +... . ......|+++| +++|.++...+ +..||.+. ++..+..+.
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---p~~i~~~~g~~~~~~l~i~~~~~~~~~ 169 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---PIEVYKVNGLLSSNELHISKDKALQRQ 169 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS---SEEEEEEESTTCSSCCEEEECHHHHHT
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC---CceEEEEcccccCCceeeecchhhccc
Confidence 88888764331 2222 1 12468999998 44666654332 45555543 222222221
Q ss_pred cCCcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEe--cc-cC------CCceEEEEEcCCCcEEEEEe
Q 011452 275 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEV--SR-TE------FMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 275 ~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~--l~-gh------~~~v~avaFspdg~llaS~s 339 (485)
.+......|+|.+..+..++.+++.+.|-+.|.+ |+.+.. |. +. ...+..|+|.|+|++++++-
T Consensus 170 ~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 170 FTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp CCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred cccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 1122345899986655555567799999999987 555444 33 32 24889999999999999854
No 301
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.42 E-value=0.081 Score=53.06 Aligned_cols=143 Identities=12% Similarity=0.113 Sum_probs=83.5
Q ss_pred cccCceEEEEeCCCCe-EEEEeeCCCcEEEeecCCCeEEEE---Ec------CCcEEEEEEcC----CceEEEEEcCCC-
Q 011452 191 SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYS---IS------DKNVQEIKISP----GIMLLIFTKASG- 255 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~-~Las~s~D~tiKlWdl~~g~~l~t---l~------~~~V~~VafSp----g~~ll~sss~~~- 255 (485)
.+..|..++|+ |||+ ++++. ..+.|++++. +++.... +. ......|+|+| ++.+.++.+...
T Consensus 16 ~l~~P~~i~~~-pdG~~l~V~e-~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 16 KLDHPWALAFL-PDNHGMLITL-RGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp EESSEEEEEEC-STTCCEEEEE-TTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCCCcEEEEEc-CCCCEEEEEe-CCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 36788999997 7999 88765 4789999985 4443211 11 23578999998 466665533210
Q ss_pred ----CeeEEEEecCCC--e--EEE----Eee---cCCcceeEEEEEecCCCEEEEEeCC--------------CcEEEEE
Q 011452 256 ----HVPLKILSIEDG--T--VLK----SFN---HLLHRNKKVDFIEQFNEKLLVKQEN--------------ENLQILD 306 (485)
Q Consensus 256 ----D~tIklWdi~tG--~--~L~----tl~---~~~~~~~~V~f~~~~~~~lls~s~D--------------~tIkIWD 306 (485)
...|-.+++..+ + ..+ .+. ...|.-..++|. |++ +|.++..| +.|.-.|
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~-pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD-GKG-YLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC-SSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC-CCC-cEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 235555665433 1 111 122 112334589996 555 67666322 3455556
Q ss_pred CCCCe------------eEEec-ccCCCceEEEEEcC-CCcEEEEEe
Q 011452 307 VRNFE------------LTEVS-RTEFMTPSAFIFLY-ENQLFLTFR 339 (485)
Q Consensus 307 v~tg~------------~~~~l-~gh~~~v~avaFsp-dg~llaS~s 339 (485)
....- ..++. .|| ..++.++|.| +|+++++-.
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEec
Confidence 65320 11222 244 3588999999 888888755
No 302
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.42 E-value=0.12 Score=52.73 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=86.7
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE--EEEEc------CCcEEEEEEcCC----ceEEEEEcCCCCee
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS------DKNVQEIKISPG----IMLLIFTKASGHVP 258 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~--l~tl~------~~~V~~VafSpg----~~ll~sss~~~D~t 258 (485)
.+..|+.++|. |||.++++.-..+.|++++..+++. +..+. ......|+|+|+ +.+.++-+...+..
T Consensus 30 gL~~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 46789999997 7999999876689999998776663 33332 246889999983 65554423223345
Q ss_pred EEEEecCCC----------eEE-EEee-cCCcceeEEEEEecCCCEEEEE-eC-------------CCcEEEEECCCC--
Q 011452 259 LKILSIEDG----------TVL-KSFN-HLLHRNKKVDFIEQFNEKLLVK-QE-------------NENLQILDVRNF-- 310 (485)
Q Consensus 259 IklWdi~tG----------~~L-~tl~-~~~~~~~~V~f~~~~~~~lls~-s~-------------D~tIkIWDv~tg-- 310 (485)
|--|....+ +.| ..+. +..|....++|. |++ +|.++ ++ -+.|-=.|....
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg-pDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG-PDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC-TTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC-CCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 555555432 222 2343 223455689996 555 45444 32 123322344422
Q ss_pred ------eeEEecccCCCceEEEEEcCCCcEEEEEe
Q 011452 311 ------ELTEVSRTEFMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 311 ------~~~~~l~gh~~~v~avaFspdg~llaS~s 339 (485)
.......||- .+..++|.|+|+++++=.
T Consensus 187 ~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 187 PGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp TTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEEC
T ss_pred CCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEec
Confidence 1111123553 567899999999888764
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.35 E-value=0.031 Score=57.38 Aligned_cols=171 Identities=15% Similarity=0.224 Sum_probs=110.5
Q ss_pred eeEEEEecCCCeEEEEeecCCcceeEEEEEec---CCCE--EEEEe--C--CCcEEEEEC--CCCeeEEecc------cC
Q 011452 257 VPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQ---FNEK--LLVKQ--E--NENLQILDV--RNFELTEVSR------TE 319 (485)
Q Consensus 257 ~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~---~~~~--lls~s--~--D~tIkIWDv--~tg~~~~~l~------gh 319 (485)
.-+.+.|+ +|++|+.+.. ++...|+..+- .+++ |+..+ . +++|+|+++ .++++...-. ..
T Consensus 50 ~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 50 SGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATA 126 (355)
T ss_dssp TEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECC
T ss_pred CCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCC
Confidence 58999999 9999999984 56677776531 1222 44443 5 799999966 5666444311 12
Q ss_pred CCceEEEEE--cCC-Cc--EEEEEeCCcEEEEeC--------CCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecC
Q 011452 320 FMTPSAFIF--LYE-NQ--LFLTFRNRTVAVWNF--------RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 386 (485)
Q Consensus 320 ~~~v~avaF--spd-g~--llaS~sD~TIklWd~--------~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d 386 (485)
...++.+++ +|. ++ .+++..++.+..|++ +++++++|.--. .+..++..+....|.-+-.
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs------q~EgcvvDd~~g~Lyv~eE- 199 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS------QTEGMAADDEYGRLYIAEE- 199 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS------CEEEEEEETTTTEEEEEET-
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC------CcceEEEcCCCCeEEEecc-
Confidence 267888888 774 54 344434999999987 236788887532 2788999998888887754
Q ss_pred CCCCCCCcCCCCeEEEEeCC-----CCeEEEEecC-CCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeE
Q 011452 387 DSDDPLAEGNAGSINISNIL-----TGKCLAKIRA-SNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDIT 460 (485)
Q Consensus 387 ~~~d~~~~~~DgtIklWdl~-----TGk~l~tl~g-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~ 460 (485)
|.-|...+.. +++.+..+.+ |- ...|.
T Consensus 200 ----------d~GIw~~da~p~~~~~~~~v~~~~~g~l-------------------------------------~aDvE 232 (355)
T 3amr_A 200 ----------DEAIWKFSAEPDGGSNGTVIDRADGRHL-------------------------------------TRDIE 232 (355)
T ss_dssp ----------TTEEEEEECSTTSCSCCEEEEEBSSSSB-------------------------------------CSCEE
T ss_pred ----------cceEEEEeCCcCCCCCceEEEEecCCcc-------------------------------------ccCcc
Confidence 3334444433 4667766632 11 02677
Q ss_pred EEEE--cCCCC-EEEEec-CCCcEEEcc
Q 011452 461 ALFY--DEDRN-EIYTGN-RHGLVHVWS 484 (485)
Q Consensus 461 sl~f--spDg~-~LaSgs-~DgtVklWd 484 (485)
.|++ .+||+ +|+..| .+.+..|+|
T Consensus 233 GLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 233 GLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred eEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 7777 67777 455544 677888876
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.25 E-value=0.028 Score=56.61 Aligned_cols=138 Identities=11% Similarity=0.018 Sum_probs=86.0
Q ss_pred CcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCe-EEEEee---cCCcceeEEEEEecC---CCEEEEEeC----C---
Q 011452 234 KNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGT-VLKSFN---HLLHRNKKVDFIEQF---NEKLLVKQE----N--- 299 (485)
Q Consensus 234 ~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~-~L~tl~---~~~~~~~~V~f~~~~---~~~lls~s~----D--- 299 (485)
..-+.|+|.|++.++++... +.|+++| .+|+ .+..+. .-......|+|. |+ ++.|.++.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~---g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~-pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERP---GRLVLIS-PSGKKLVASFDVANVGEAGLLGLALH-PEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEEETT---TEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEEeCC---CEEEEEe-CCCceEeeccceeecCCCceeeEEeC-CCCCcCCEEEEEEeccCCCCCc
Confidence 35788999998888887543 6888887 5776 222221 112456689986 54 567776532 3
Q ss_pred -CcEEEEECCCC-------e-eEEecc-cCCCceEEEEEcCCCcEEEEEeC--------------CcEEEEeCCCc----
Q 011452 300 -ENLQILDVRNF-------E-LTEVSR-TEFMTPSAFIFLYENQLFLTFRN--------------RTVAVWNFRGE---- 351 (485)
Q Consensus 300 -~tIkIWDv~tg-------~-~~~~l~-gh~~~v~avaFspdg~llaS~sD--------------~TIklWd~~G~---- 351 (485)
..|..|++..+ + ++..+. +..+....++|.|||.++++.+| +.|.-.+.+|+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56777777654 1 111121 22334678999999999998653 34444444564
Q ss_pred ------EEEEeecCCCCCCCCCeeEEEECC-CCCEEEEE
Q 011452 352 ------LVTSFEDHLLWHPDCNTNNIYITS-DQDLIISY 383 (485)
Q Consensus 352 ------ll~tl~gH~~~~~~~~v~svafSp-DG~~LaS~ 383 (485)
.+. -.||.. .+.++|+| +|++.++-
T Consensus 184 npf~~~~i~-a~G~rn------p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 184 NPFPNSPIW-SYGHRN------PQGIDWHRASGVMVATE 215 (354)
T ss_dssp SSSTTCCEE-EECCSC------CCEEEECTTTCCEEEEE
T ss_pred CCCCCCcEE-EEccCC------cceEEEeCCCCCEEEEe
Confidence 222 235543 46899999 78877764
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.98 E-value=0.066 Score=54.52 Aligned_cols=172 Identities=9% Similarity=0.087 Sum_probs=102.6
Q ss_pred cCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEE-EEcC-----C---cEEEEEE---cCCceEEEEEcCCCCeeEE
Q 011452 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SISD-----K---NVQEIKI---SPGIMLLIFTKASGHVPLK 260 (485)
Q Consensus 193 ~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~-tl~~-----~---~V~~Vaf---Spg~~ll~sss~~~D~tIk 260 (485)
.+|..+.|++.+|.+++|.-..++|-.||...+.... .+.+ . .+..|.+ -|+++|++.....
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~------ 86 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA------ 86 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET------
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc------
Confidence 4677899987789999988899999999998664322 3322 1 3567777 4556555531100
Q ss_pred EEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECC---CCeeEEec--c----c-------CCCceE
Q 011452 261 ILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR---NFELTEVS--R----T-------EFMTPS 324 (485)
Q Consensus 261 lWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~---tg~~~~~l--~----g-------h~~~v~ 324 (485)
.+|... +.. -+.+.-|..+|+. +++.+... . + -...++
T Consensus 87 ----------------------~af~~~-g~~---~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n 140 (334)
T 2p9w_A 87 ----------------------KSFNFA-DQS---SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV 140 (334)
T ss_dssp ----------------------TTTCTT-SCC---SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE
T ss_pred ----------------------cccccc-ccc---cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc
Confidence 000000 000 0123445555555 44433221 1 1 122478
Q ss_pred EEEEcCCCcEEEEEe-C-CcEEEEeCCCcEEEEeecCC-CCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEE
Q 011452 325 AFIFLYENQLFLTFR-N-RTVAVWNFRGELVTSFEDHL-LWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSIN 401 (485)
Q Consensus 325 avaFspdg~llaS~s-D-~TIklWd~~G~ll~tl~gH~-~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIk 401 (485)
.++.-++|+..++++ - +.|-..+.+|+.+..+.-.. .....+..+.|+++|||++|+.... ++.+-
T Consensus 141 DvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-----------~g~L~ 209 (334)
T 2p9w_A 141 QSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-----------PRALT 209 (334)
T ss_dssp EEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-----------SSSEE
T ss_pred eeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-----------CCeEE
Confidence 888999999999988 7 77666666787555442111 1111233679999999998887632 68888
Q ss_pred EEeCCC
Q 011452 402 ISNILT 407 (485)
Q Consensus 402 lWdl~T 407 (485)
-.|+.+
T Consensus 210 ~fD~~~ 215 (334)
T 2p9w_A 210 AFDVSK 215 (334)
T ss_dssp EEECSS
T ss_pred EEcCCC
Confidence 888763
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.59 E-value=0.41 Score=48.81 Aligned_cols=158 Identities=11% Similarity=0.123 Sum_probs=92.2
Q ss_pred EEEEEEcCCceEEEEEc----------CCCCeeEEEEecC--CCeEEE-EeecC-----CcceeEEEEEec-CCC-EEEE
Q 011452 236 VQEIKISPGIMLLIFTK----------ASGHVPLKILSIE--DGTVLK-SFNHL-----LHRNKKVDFIEQ-FNE-KLLV 295 (485)
Q Consensus 236 V~~VafSpg~~ll~sss----------~~~D~tIklWdi~--tG~~L~-tl~~~-----~~~~~~V~f~~~-~~~-~lls 295 (485)
-.+|++.|++.+.+++. .+.++.|-++|.. +++... .+.+. .-+--.+++.+. ++. +|.+
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 34555666666655541 0134678888876 333211 22221 113336666432 333 4655
Q ss_pred E-e--CCCcEEEEECCCC--e--eEEecccC-CCceEEEEEcCCCcEEEEEe----C------------CcEEEEeCC-C
Q 011452 296 K-Q--ENENLQILDVRNF--E--LTEVSRTE-FMTPSAFIFLYENQLFLTFR----N------------RTVAVWNFR-G 350 (485)
Q Consensus 296 ~-s--~D~tIkIWDv~tg--~--~~~~l~gh-~~~v~avaFspdg~llaS~s----D------------~TIklWd~~-G 350 (485)
. . .+.+|.||++..+ . .+....+. ...++.+++.++|.+.+|.. | .+=+||-++ +
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 4 2 4789999887653 2 23334332 45799999999999888753 2 234566665 5
Q ss_pred cEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCC-CCe
Q 011452 351 ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNIL-TGK 409 (485)
Q Consensus 351 ~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~-TGk 409 (485)
++...+++ ... -|.|+|||||++|.-+.. ..+.|..+++. +|+
T Consensus 212 ~~~~~~~~-l~~-----pNGia~spDg~~lYvadt----------~~~~I~~~~~~~~g~ 255 (355)
T 3sre_A 212 DVRVVAEG-FDF-----ANGINISPDGKYVYIAEL----------LAHKIHVYEKHANWT 255 (355)
T ss_dssp CCEEEEEE-ESS-----EEEEEECTTSSEEEEEEG----------GGTEEEEEEECTTSC
T ss_pred eEEEeecC-Ccc-----cCcceECCCCCEEEEEeC----------CCCeEEEEEECCCCc
Confidence 54333333 222 689999999988776643 25889999985 343
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.44 E-value=0.96 Score=46.04 Aligned_cols=181 Identities=13% Similarity=0.114 Sum_probs=108.4
Q ss_pred CceEEEEeCCCCeEEEEee------------CCCcEEEeecCC--CeE-EEEEcC-------CcEEEEEEcC--Cc--eE
Q 011452 194 WPGFVEFDDVNGKVLTYSA------------QDSIYKVFDLKN--YTM-LYSISD-------KNVQEIKISP--GI--ML 247 (485)
Q Consensus 194 ~~~~V~Fs~pnG~~Las~s------------~D~tiKlWdl~~--g~~-l~tl~~-------~~V~~VafSp--g~--~l 247 (485)
.+..++.+ |+|..+++++ .++.|-++|+++ ++. ...+.+ -.-..|.+.+ ++ .|
T Consensus 51 G~EDi~~~-~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEIL-PNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEEC-TTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEc-CCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 35577776 6888877763 688899999873 332 122222 1455666643 23 45
Q ss_pred EEEEcCCCCeeEEEEecCCC-e---EEEEeecC-CcceeEEEEEecCCCEEEEEeC----C------------CcEEEEE
Q 011452 248 LIFTKASGHVPLKILSIEDG-T---VLKSFNHL-LHRNKKVDFIEQFNEKLLVKQE----N------------ENLQILD 306 (485)
Q Consensus 248 l~sss~~~D~tIklWdi~tG-~---~L~tl~~~-~~~~~~V~f~~~~~~~lls~s~----D------------~tIkIWD 306 (485)
.+........+|.||++..+ . .+.++.+. ......+++. ++| .+.++.. | .+=+||-
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~-~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAV-GPE-HFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEE-ETT-EEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEe-CCC-CEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 55544444578999887653 2 23455542 1234577775 334 4444431 1 2345665
Q ss_pred CCCCeeEEecccCCCceEEEEEcCCCcEEEE-Ee-CCcEEEEeCC--CcEE--EEeecCCCCCCCCCeeEEEECC-CCCE
Q 011452 307 VRNFELTEVSRTEFMTPSAFIFLYENQLFLT-FR-NRTVAVWNFR--GELV--TSFEDHLLWHPDCNTNNIYITS-DQDL 379 (485)
Q Consensus 307 v~tg~~~~~l~gh~~~v~avaFspdg~llaS-~s-D~TIklWd~~--G~ll--~tl~gH~~~~~~~~v~svafSp-DG~~ 379 (485)
+..+++.... .....++.++|||||+.|.- -+ .+.|..++++ |++- +.+. .. ..--++++.+ +|.+
T Consensus 208 ~d~~~~~~~~-~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~--~~----g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 208 YSPNDVRVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FD----TLVDNISVDPVTGDL 280 (355)
T ss_dssp ECTTCCEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CS----SEEEEEEECTTTCCE
T ss_pred EECCeEEEee-cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe--CC----CCCceEEEeCCCCcE
Confidence 5545544333 44568999999999976554 45 8899999984 6542 2442 11 1256899999 5999
Q ss_pred EEEEe
Q 011452 380 IISYC 384 (485)
Q Consensus 380 LaS~s 384 (485)
.+++.
T Consensus 281 wva~~ 285 (355)
T 3sre_A 281 WVGCH 285 (355)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88765
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.89 E-value=0.63 Score=47.33 Aligned_cols=157 Identities=10% Similarity=0.097 Sum_probs=98.7
Q ss_pred EEEEEecCCCEEEEEe-CCCcEEEEECCCCeeEEecccC-------CCceEEEEE---cCCCcEEEEEe-----------
Q 011452 282 KVDFIEQFNEKLLVKQ-ENENLQILDVRNFELTEVSRTE-------FMTPSAFIF---LYENQLFLTFR----------- 339 (485)
Q Consensus 282 ~V~f~~~~~~~lls~s-~D~tIkIWDv~tg~~~~~l~gh-------~~~v~avaF---spdg~llaS~s----------- 339 (485)
+++|. +..+.+..++ ..++|-.||...+...++.-.+ ...+..+.+ -|+|++++...
T Consensus 17 ~~~wd-~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 17 DTIYD-RTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp CEEEE-TTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CccCc-CCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 56665 3457888877 8999999999866544442222 125688999 48999998532
Q ss_pred ---CCcEEEEeCC----CcEEEEee--cCCCC-------CCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCC-CeEEE
Q 011452 340 ---NRTVAVWNFR----GELVTSFE--DHLLW-------HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNA-GSINI 402 (485)
Q Consensus 340 ---D~TIklWd~~----G~ll~tl~--gH~~~-------~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~D-gtIkl 402 (485)
++-|..+|+. |+.+.... +.... .+ ...+.+++.++|..-++++. - +.|-.
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~-~~~nDvavD~~GnaYVt~s~-----------~~~~I~r 163 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP-FGVVQSAQDRDGNSYVAFAL-----------GMPAIAR 163 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC-EEEEEEEECTTSCEEEEEEE-----------SSCEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccc-cCCceeEECCCCCEEEeCCC-----------CCCeEEE
Confidence 4678899987 77655433 22110 00 11689999999999999886 3 55544
Q ss_pred EeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEecCCCcEEE
Q 011452 403 SNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGNRHGLVHV 482 (485)
Q Consensus 403 Wdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs~DgtVkl 482 (485)
.+.. |+.+..+--...+. .+. -..+.++|+|||+.|+.....+.+.-
T Consensus 164 V~pd-G~~~~~~~~~~~~~---------------------~~~-----------~G~nGIv~~pdg~~Liv~~~~g~L~~ 210 (334)
T 2p9w_A 164 VSAD-GKTVSTFAWESGNG---------------------GQR-----------PGYSGITFDPHSNKLIAFGGPRALTA 210 (334)
T ss_dssp ECTT-SCCEEEEEECCCCS---------------------SSC-----------CSCSEEEEETTTTEEEEESSSSSEEE
T ss_pred EeCC-CCEEeeeeecCCCc---------------------ccc-----------cCcceEEEeCCCCEEEEEcCCCeEEE
Confidence 4432 55444332111000 000 14668999999998888766776654
Q ss_pred cc
Q 011452 483 WS 484 (485)
Q Consensus 483 Wd 484 (485)
.|
T Consensus 211 fD 212 (334)
T 2p9w_A 211 FD 212 (334)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 309
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.79 E-value=1.9 Score=43.66 Aligned_cols=228 Identities=12% Similarity=0.123 Sum_probs=119.3
Q ss_pred EEEEEe--cCEEEEEeCCCeEEeeecccCcE--EEEee---cCCcccEEEEEEeeC----CCEEEEEEeecCCCCcccce
Q 011452 99 IEIVAA--RDIVFALAQSGVCAAFCRETNQR--ICFLN---VTADEVIRSLFYNKN----NDSLITVSVYASDNFSSLRC 167 (485)
Q Consensus 99 ~~i~~s--~~~ias~s~dgtiklW~~~tG~~--l~tl~---g~~~~~i~sv~~spd----g~~Las~S~d~~~d~stL~~ 167 (485)
+.|+|. |.++++--..|.|++++..+|+. +..+. .........|+|+|| |...++-+. ...+
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~-~~~~------ 107 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS-ASDN------ 107 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC-SSSE------
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec-CCCC------
Confidence 456665 66655555599999998665664 22221 112446789999995 544343221 1222
Q ss_pred eEEEEeEeccC-----CcCcccceeeec---cccCceEEEEeCCCCeEEEEeeC--------C---CcEEEeecC-CCe-
Q 011452 168 RSTRIEYIRRG-----KPDAGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQ--------D---SIYKVFDLK-NYT- 226 (485)
Q Consensus 168 ~t~~lw~i~~G-----~~~~~~~lf~~~---~~~~~~~V~Fs~pnG~~Las~s~--------D---~tiKlWdl~-~g~- 226 (485)
+..++-+ ..+ ++.....+|... ...+...++|+ |||.+.++-+. | ..=|||.+. +|+
T Consensus 108 ~v~R~~~-~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg-pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 108 RIVRMLY-DEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG-PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EEEEEEB-CTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC-TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred EEEEEEe-CCCCcccccCCCcEEEEEcCCCCCCccCccccCC-CCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 3334322 232 222223345431 11123469998 79998877542 1 112334333 222
Q ss_pred ---------EEEEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeE------------------EEEeecCCcc
Q 011452 227 ---------MLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTV------------------LKSFNHLLHR 279 (485)
Q Consensus 227 ---------~l~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~------------------L~tl~~~~~~ 279 (485)
.++..--.+.+.++|.|++.|.++.-. .|..=.|--++.|.- +..+..+...
T Consensus 186 p~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g-~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 186 APGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFG-QDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp CTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECC-SSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred cCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecC-CCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 344432346788999997777766432 222112222222211 1112111012
Q ss_pred eeEEEEEecCCCEEEEEe-CCCcEEEEECCCCe----eEEecccCCCceEEEEEcCCCcEEEEEe
Q 011452 280 NKKVDFIEQFNEKLLVKQ-ENENLQILDVRNFE----LTEVSRTEFMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 280 ~~~V~f~~~~~~~lls~s-~D~tIkIWDv~tg~----~~~~l~gh~~~v~avaFspdg~llaS~s 339 (485)
-..++|. ++.++.+. ..+.|.-..+..+. ....+.+...++..|++.|||.++++..
T Consensus 265 p~G~~~~---~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 265 PSGIAYA---EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEEE---TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CcceEEE---cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 2366775 34566654 45555555665442 3445666667999999999999988755
No 310
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.11 E-value=2.8 Score=41.22 Aligned_cols=241 Identities=10% Similarity=0.058 Sum_probs=125.0
Q ss_pred EecCEEEEEe--CCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCC--Ccc--cceeEEEEeEec
Q 011452 103 AARDIVFALA--QSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDN--FSS--LRCRSTRIEYIR 176 (485)
Q Consensus 103 ~s~~~ias~s--~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d--~st--L~~~t~~lw~i~ 176 (485)
+.++.|+-.. .++.+...+.+ |.....|.. + ..-+++|+|+.|.-++.....+ .+- ..-+.+...++.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~--~---~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSN--D---TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETT-SCSCEEEEE--E---EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EeCCEEEEEeCCCCceEEEEcCC-CCCCEEccC--C---ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 3444444443 24444444444 544444433 1 2357799999999876422100 000 001344444533
Q ss_pred cCCcCcccceeeeccccCceEEEEeCCCCeEEEEee--CCCcEEEeecC-CCeEEEEEcCCcEEEEEEcC-CceEEEEEc
Q 011452 177 RGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLK-NYTMLYSISDKNVQEIKISP-GIMLLIFTK 252 (485)
Q Consensus 177 ~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s--~D~tiKlWdl~-~g~~l~tl~~~~V~~VafSp-g~~ll~sss 252 (485)
.++. .+.... ...+|+ ++|+.|.... .++.-+|+-++ +|+....|..+.+ .+|+| ++.|. ..+
T Consensus 97 g~~~----~~l~~~-----~~~~~s-~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy-~t~ 163 (302)
T 3s25_A 97 GHGS----TVLDPD-----PCIYAS-LIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFY-YNN 163 (302)
T ss_dssp SCCC----EEEECS-----CEEEEE-EETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEE-EEC
T ss_pred CCcc----eEeecC-----CccEEE-EeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEE-EEe
Confidence 3321 122221 123676 5788888876 34444454433 3444445544444 56776 44544 434
Q ss_pred CCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCCEEEEEeCC--CcEEEEECCCCeeEEecccCCCceEEEEEcC
Q 011452 253 ASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNFELTEVSRTEFMTPSAFIFLY 330 (485)
Q Consensus 253 ~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D--~tIkIWDv~tg~~~~~l~gh~~~v~avaFsp 330 (485)
. ...+|..-++..+....-+++ ... ..++ |+++.|.-...+ ..|..=++..++ .++|.... + -.|+|
T Consensus 164 ~-g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~-P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~~~--~--~~~~~ 232 (302)
T 3s25_A 164 P-KNGQLYRYDTASQSEALFYDC---NCY-KPVV-LDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTEAN--I--EHYNV 232 (302)
T ss_dssp T-TTCCEEEEETTTTEEEEEECS---CEE-EEEE-EETTEEEEEEGGGTTEEEEECSSSCC-CEECSCSC--E--EEEEE
T ss_pred C-CCceEEEEECCCCCEEEEeCC---Ccc-ceee-ecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeCCC--c--ceEEE
Confidence 3 457898889876655444443 222 2344 678888877533 456666777655 34443322 2 23788
Q ss_pred CCcEEEEEe---CCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEE
Q 011452 331 ENQLFLTFR---NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIIS 382 (485)
Q Consensus 331 dg~llaS~s---D~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS 382 (485)
+|+.|.-++ ...|..=+++|.-.+.+.... +. ++++-+++|.=
T Consensus 233 ~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~-------~~--~i~i~~d~Iy~ 278 (302)
T 3s25_A 233 YGSLIFYQRGGDNPALCVVKNDGTGFKELAKGE-------FC--NINVTSQYVYF 278 (302)
T ss_dssp ETTEEEEEECSSSCEEEEEETTSCCCEEEEESC-------EE--EEEECSSEEEE
T ss_pred CCCEEEEEECCCCcEEEEEECCCCccEEeeCCc-------cc--eEEEeCCEEEE
Confidence 998887543 346666667776544443321 33 44555666654
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.07 E-value=2.5 Score=44.04 Aligned_cols=154 Identities=7% Similarity=0.094 Sum_probs=88.9
Q ss_pred cccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeE--EEEEc--------CCcEEEEEEcC----CceEEEEEcC---
Q 011452 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS--------DKNVQEIKISP----GIMLLIFTKA--- 253 (485)
Q Consensus 191 ~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~--l~tl~--------~~~V~~VafSp----g~~ll~sss~--- 253 (485)
.+.+|+.++|+ |||.++++....+.|++++..+|+. +..+. ......|+|+| ++.+.++.+.
T Consensus 25 ~l~~P~~~a~~-pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 25 NLNKPHALLWG-PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CCSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCCceEEEEc-CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 36788999997 7999999865545788888766653 33442 23577999998 6776666432
Q ss_pred ---CC----CeeEEEEecCCC-------eEEE-Eee-cCCcceeEEEEEecCCCEEEEEeCC------------------
Q 011452 254 ---SG----HVPLKILSIEDG-------TVLK-SFN-HLLHRNKKVDFIEQFNEKLLVKQEN------------------ 299 (485)
Q Consensus 254 ---~~----D~tIklWdi~tG-------~~L~-tl~-~~~~~~~~V~f~~~~~~~lls~s~D------------------ 299 (485)
+. ...|.-++...+ +.+. .+. +..|....++|. +++...++.++.
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~-pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p 182 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIG-PDQKIYYTIGDQGRNQLAYLFLPNQAQHTP 182 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEEC-TTSCEEEEECCTTTTSGGGTTSCCCTTCCC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeEC-CCCeEEEEECCCCCCCcccccccccccccc
Confidence 00 124444444322 1222 233 223556799996 555444433321
Q ss_pred --------------CcEEEEECCCCe-----------eEEe-cccCCCceEEEEEcCCCcEEEEEe--CCcEEEEeC
Q 011452 300 --------------ENLQILDVRNFE-----------LTEV-SRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNF 348 (485)
Q Consensus 300 --------------~tIkIWDv~tg~-----------~~~~-l~gh~~~v~avaFspdg~llaS~s--D~TIklWd~ 348 (485)
+.|--.|.. |. ..++ ..||- .+..++|.|+|+++++-. |+--.|.-+
T Consensus 183 ~~~~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~~~~ei~a~G~R-Np~gla~dp~G~L~~~d~g~~~~dein~i 257 (454)
T 1cru_A 183 TQQELNGKDYHTYMGKVLRLNLD-GSIPKDNPSFNGVVSHIYTLGHR-NPQGLAFTPNGKLLQSEQGPNSDDEINLI 257 (454)
T ss_dssp CHHHHHTTCCTTCSSEEEEECTT-SCCCTTCCEETTEECSEEEBCCS-EEEEEEECTTSCEEEEEECSSSCEEEEEC
T ss_pred ccccccccCCCCCCeeEEEEeCC-CCCCCCCCCCCCCcceEEEECCC-CcceEEECCCCCEEEEecCCCCCeEEEEe
Confidence 122222433 22 1122 23553 588899999999988765 554455544
No 312
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.96 E-value=0.42 Score=50.31 Aligned_cols=74 Identities=12% Similarity=0.160 Sum_probs=49.1
Q ss_pred eEEecccCCCceEEEEEcCCCc--EEEEEeCCcEEEEeCCCcE----EEEeecCCCC----CCCCCeeEEEECCC----C
Q 011452 312 LTEVSRTEFMTPSAFIFLYENQ--LFLTFRNRTVAVWNFRGEL----VTSFEDHLLW----HPDCNTNNIYITSD----Q 377 (485)
Q Consensus 312 ~~~~l~gh~~~v~avaFspdg~--llaS~sD~TIklWd~~G~l----l~tl~gH~~~----~~~~~v~svafSpD----G 377 (485)
.++++......+++++|.|||+ +|++-..+.|++++.+|.. +..+..-... ........|+|.|| |
T Consensus 5 ~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~ 84 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG 84 (463)
T ss_dssp EEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC
T ss_pred EEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC
Confidence 3444444456899999999996 8888779999999876542 2222211000 00123688999996 8
Q ss_pred CEEEEEec
Q 011452 378 DLIISYCK 385 (485)
Q Consensus 378 ~~LaS~s~ 385 (485)
.+-++++.
T Consensus 85 ~lYv~yt~ 92 (463)
T 2wg3_C 85 KLYVSYTT 92 (463)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 88898875
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.91 E-value=0.78 Score=47.84 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=47.7
Q ss_pred EEecccCCCceEEEEEcCCCcEEEEEeC-CcEEEEeCC-CcE--EEEeecCCC-CCCCCCeeEEEECC----CCCEEEEE
Q 011452 313 TEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFR-GEL--VTSFEDHLL-WHPDCNTNNIYITS----DQDLIISY 383 (485)
Q Consensus 313 ~~~l~gh~~~v~avaFspdg~llaS~sD-~TIklWd~~-G~l--l~tl~gH~~-~~~~~~v~svafSp----DG~~LaS~ 383 (485)
++++......+++++|.|||+++++-.. +.|.+++.. |+. +..+..-.. .........|+|+| +|.+.+++
T Consensus 19 ~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3344334568899999999999999884 579888874 653 333432110 00112367999999 67777877
Q ss_pred ec
Q 011452 384 CK 385 (485)
Q Consensus 384 s~ 385 (485)
+.
T Consensus 99 s~ 100 (454)
T 1cru_A 99 TF 100 (454)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 314
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.89 E-value=7.9 Score=45.26 Aligned_cols=215 Identities=12% Similarity=0.106 Sum_probs=123.2
Q ss_pred CCCcEEEeecCCCe--EEEEEc-CCcEEEEEEcC-CceEEEEEcCC----------------------------------
Q 011452 213 QDSIYKVFDLKNYT--MLYSIS-DKNVQEIKISP-GIMLLIFTKAS---------------------------------- 254 (485)
Q Consensus 213 ~D~tiKlWdl~~g~--~l~tl~-~~~V~~VafSp-g~~ll~sss~~---------------------------------- 254 (485)
.++++||..+.+.+ .+.+++ +..+..|+++| .+.+++..+..
T Consensus 713 ~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1158)
T 3ei3_A 713 NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSS 792 (1158)
T ss_dssp CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC---
T ss_pred cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccccccccc
Confidence 35679998876433 344554 66788899987 33333322110
Q ss_pred ------------CCeeEEEEecCCCeEEEEeecCC-cceeEEEEEecC---CCEEEEEe------C----CCcEEEEECC
Q 011452 255 ------------GHVPLKILSIEDGTVLKSFNHLL-HRNKKVDFIEQF---NEKLLVKQ------E----NENLQILDVR 308 (485)
Q Consensus 255 ------------~D~tIklWdi~tG~~L~tl~~~~-~~~~~V~f~~~~---~~~lls~s------~----D~tIkIWDv~ 308 (485)
.-..|+|.|-.+.+.+.++.--. ..+.+++..... .+.+++|. + -|-|.++++.
T Consensus 793 ~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~ 872 (1158)
T 3ei3_A 793 TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS 872 (1158)
T ss_dssp -------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE
T ss_pred ccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE
Confidence 01358999998999887776211 223444433221 35777763 1 2679999998
Q ss_pred CCeeEEecc-cCCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecC
Q 011452 309 NFELTEVSR-TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 386 (485)
Q Consensus 309 tg~~~~~l~-gh~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d 386 (485)
.+++..+.. ...+.|.+++= -+|+ |+.+-.++|+||++. .++++ ++.... +. |..+.+...|++|+-|..
T Consensus 873 ~~kL~lv~~~~v~g~v~al~~-~~g~-Lla~ig~~l~vy~l~~~~~L~-~~~~~~--~~--i~~~~l~~~~~~I~vgD~- 944 (1158)
T 3ei3_A 873 DGKLQTVAEKEVKGAVYSMVE-FNGK-LLASINSTVRLYEWTTEKELR-TECNHY--NN--IMALYLKTKGDFILVGDL- 944 (1158)
T ss_dssp TTEEEEEEEEEESSCEEEEEE-ETTE-EEEEETTEEEEEEECTTSCEE-EEEEEC--CC--SCEEEEEEETTEEEEEES-
T ss_pred CCEEEEEEEEEcCCcCEEEee-eCCE-EEEEcCCEEEEEECCCCceEE-EEeecc--cc--EEEEEEeccCCEEEEEEh-
Confidence 665544332 23567888762 2454 555568899999996 44444 322110 01 334455456778887754
Q ss_pred CCCCCCCcCCCCeEEE--EeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccccccccchhcccCCeEEEEE
Q 011452 387 DSDDPLAEGNAGSINI--SNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFY 464 (485)
Q Consensus 387 ~~~d~~~~~~DgtIkl--Wdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~f 464 (485)
-.+|-+ |+-..++.. .+-.+.. -.+|+++.|
T Consensus 945 ----------~~Sv~~~~y~~~~~~L~-~~a~D~~------------------------------------~~~vta~~~ 977 (1158)
T 3ei3_A 945 ----------MRSVLLLAYKPMEGNFE-EIARDFN------------------------------------PNWMSAVEI 977 (1158)
T ss_dssp ----------SBCEEEEEEETTTTEEE-EEEECCS------------------------------------CBCEEEEEE
T ss_pred ----------hheEEEEEEEcCCCeEE-EEEeecc------------------------------------cccEEEEEE
Confidence 244544 443333332 2322221 038999888
Q ss_pred cCCCCEEEEecCCCcEEEc
Q 011452 465 DEDRNEIYTGNRHGLVHVW 483 (485)
Q Consensus 465 spDg~~LaSgs~DgtVklW 483 (485)
=-++ .++.|..+|.+.+.
T Consensus 978 ld~~-t~l~aD~~gNl~vl 995 (1158)
T 3ei3_A 978 LDDD-NFLGAENAFNLFVC 995 (1158)
T ss_dssp EETT-EEEEEETTSEEEEE
T ss_pred EccC-cEEEEcCCCcEEEE
Confidence 6554 66668888888764
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.74 E-value=3.7 Score=40.80 Aligned_cols=234 Identities=10% Similarity=0.087 Sum_probs=119.4
Q ss_pred EEEEEe--cCEEEEEeCCCeEEeeecccCcEEEEee------cCCcccEEEEEEeeC----CCEEEEEEeecCCCCcccc
Q 011452 99 IEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLN------VTADEVIRSLFYNKN----NDSLITVSVYASDNFSSLR 166 (485)
Q Consensus 99 ~~i~~s--~~~ias~s~dgtiklW~~~tG~~l~tl~------g~~~~~i~sv~~spd----g~~Las~S~d~~~d~stL~ 166 (485)
+.|+|. |..|+.+...|.|++++.. |+....+. .........|+|+|| +...++-+..+.++- .
T Consensus 21 ~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~---~ 96 (353)
T 2g8s_A 21 WALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK---A 96 (353)
T ss_dssp EEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC---E
T ss_pred EEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC---c
Confidence 456665 6525556678999998854 54321111 112335689999995 544444232111110 0
Q ss_pred eeEEEEeEecc--CCcCcccceeeec-----cccCceEEEEeCCCCeEEEEeeCC-------------CcEEEeecCCC-
Q 011452 167 CRSTRIEYIRR--GKPDAGFALFESE-----SLKWPGFVEFDDVNGKVLTYSAQD-------------SIYKVFDLKNY- 225 (485)
Q Consensus 167 ~~t~~lw~i~~--G~~~~~~~lf~~~-----~~~~~~~V~Fs~pnG~~Las~s~D-------------~tiKlWdl~~g- 225 (485)
...+.-+++.. +++.....++... ...+...++|+ |||.+.++-+.. +.|.-.|....
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~-pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD-GKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC-SSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC-CCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 01222222221 2222112233321 11235679998 799887775431 23444454321
Q ss_pred -------------eEEEEEcCCcEEEEEEcC-CceEEEEEcCCCCeeEEEEecCCCeE----------------------
Q 011452 226 -------------TMLYSISDKNVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTV---------------------- 269 (485)
Q Consensus 226 -------------~~l~tl~~~~V~~VafSp-g~~ll~sss~~~D~tIklWdi~tG~~---------------------- 269 (485)
..++..--.+.+.++|.| ++.|.++.... +..=.|.-++.|.-
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~-~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP-RGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS-BSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC-CCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 123443335789999998 77777764321 11112222222211
Q ss_pred ---------EEEeecCCcceeEEEEEec-----CCCEEEEEe-CCCcEEEEECCCCeeEE---ecccCCCceEEEEEcCC
Q 011452 270 ---------LKSFNHLLHRNKKVDFIEQ-----FNEKLLVKQ-ENENLQILDVRNFELTE---VSRTEFMTPSAFIFLYE 331 (485)
Q Consensus 270 ---------L~tl~~~~~~~~~V~f~~~-----~~~~lls~s-~D~tIkIWDv~tg~~~~---~l~gh~~~v~avaFspd 331 (485)
+..+..| .....++|..- ..+.++++. ..+.|...++..++... .+.+....+..+++.||
T Consensus 255 ~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp SSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 1122221 12345676521 135666664 77888888887765432 23344458999999999
Q ss_pred CcEEEEEe
Q 011452 332 NQLFLTFR 339 (485)
Q Consensus 332 g~llaS~s 339 (485)
|.++++..
T Consensus 334 G~lyv~td 341 (353)
T 2g8s_A 334 GYLYVLTD 341 (353)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEEe
Confidence 99888643
No 316
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.73 E-value=3.5 Score=40.48 Aligned_cols=160 Identities=8% Similarity=-0.009 Sum_probs=96.6
Q ss_pred CCCeEEEEeeCC--------------CcEEEeecCCCeEEEEEcCCcEEEEEEcC-CceEEEEE-cCCCCeeEEEEecCC
Q 011452 203 VNGKVLTYSAQD--------------SIYKVFDLKNYTMLYSISDKNVQEIKISP-GIMLLIFT-KASGHVPLKILSIED 266 (485)
Q Consensus 203 pnG~~Las~s~D--------------~tiKlWdl~~g~~l~tl~~~~V~~VafSp-g~~ll~ss-s~~~D~tIklWdi~t 266 (485)
++|..|.+++.. ..|+.-++.+++ ...+...... +|+| +.+++-+. +.+....|..-++.
T Consensus 62 ~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~-~~~l~~~~~~--~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d- 137 (302)
T 3s25_A 62 ADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG-STVLDPDPCI--YASLIGNYIYYLHYDTQTATSLYRIRID- 137 (302)
T ss_dssp ECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC-CEEEECSCEE--EEEEETTEEEEEEESSSSCEEEEEEETT-
T ss_pred EcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc-ceEeecCCcc--EEEEeCCEEEEEeecCCCCceEEEEECC-
Confidence 678888888653 345555665544 2223333322 5675 66665543 13445778888874
Q ss_pred CeEEEEeecCCcceeEEEEEecCCCEEEEEeC-CCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe--C-Cc
Q 011452 267 GTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQE-NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR--N-RT 342 (485)
Q Consensus 267 G~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~-D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s--D-~T 342 (485)
|.....+..+. . .+|. ++++.|.-.+. ..+|..-++.++....++.+. . ...+.|++..|+=.. + ..
T Consensus 138 Gs~~~~lt~~~--~--~~~~-~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~---~-~~~~~P~g~~iy~t~~~~~~~ 208 (302)
T 3s25_A 138 GEEKKKIKNHY--L--FTCN-TSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN---C-YKPVVLDDTNVYYMDVNRDNA 208 (302)
T ss_dssp SCCCEEEESSC--C--CCSE-EETTEEEEECTTTCCEEEEETTTTEEEEEECSC---E-EEEEEEETTEEEEEEGGGTTE
T ss_pred CCCeEEEeCCC--c--eEee-EECCEEEEEeCCCceEEEEECCCCCEEEEeCCC---c-cceeeecCCEEEEEEcCCCcE
Confidence 55566666432 2 3343 56788887764 688888899877765554432 2 234668888877544 3 35
Q ss_pred EEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEe
Q 011452 343 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 384 (485)
Q Consensus 343 IklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s 384 (485)
|..=+++|.-.+.|.... + ..|+|+|++|.-++
T Consensus 209 I~~~~ldG~~~~~Lt~~~-------~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 209 IVHVNINNPNPVVLTEAN-------I--EHYNVYGSLIFYQR 241 (302)
T ss_dssp EEEECSSSCCCEECSCSC-------E--EEEEEETTEEEEEE
T ss_pred EEEEECCCCCeEEEeCCC-------c--ceEEECCCEEEEEE
Confidence 655667776666676432 3 34788999997554
No 317
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.38 E-value=7 Score=45.69 Aligned_cols=233 Identities=10% Similarity=0.009 Sum_probs=125.5
Q ss_pred CEEEEEeCCCeEEeeecccCc--EEEEeecCCcccEEEEEEeeCCCEEEEEEeecC----CC-Cc---------------
Q 011452 106 DIVFALAQSGVCAAFCRETNQ--RICFLNVTADEVIRSLFYNKNNDSLITVSVYAS----DN-FS--------------- 163 (485)
Q Consensus 106 ~~ias~s~dgtiklW~~~tG~--~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~----~d-~s--------------- 163 (485)
+-++..+ ++++++..++.-+ .++++.- ...++.|+|+|+.+.++.+..+.. ++ ..
T Consensus 707 ~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL--~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1158)
T 3ei3_A 707 DSLALAN-NSTLTIGTIDEIQKLHIRTVPL--YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV 783 (1158)
T ss_dssp TEEEEEC-SSCEEEEEECCSSSEEEEEEEC--SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred CcEEEEc-CCceEEEEecccCCeeEEEEeC--CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence 3344333 4557777665322 2334443 357899999999998665543210 00 00
Q ss_pred -------------------ccceeEEEEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEee----------CC
Q 011452 164 -------------------SLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QD 214 (485)
Q Consensus 164 -------------------tL~~~t~~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s----------~D 214 (485)
......++|-|..+.+......|-+.|....+..|.|......+|+-|. .-
T Consensus 784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~ 863 (1158)
T 3ei3_A 784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQ 863 (1158)
T ss_dssp CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCC
T ss_pred cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCc
Confidence 0012345555544343321111111122222234567533346776663 24
Q ss_pred CcEEEeecCCCeEEEEEc----CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCC
Q 011452 215 SIYKVFDLKNYTMLYSIS----DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFN 290 (485)
Q Consensus 215 ~tiKlWdl~~g~~l~tl~----~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~ 290 (485)
|-|.|+++.++++ .-++ ...|.+++== +|+++++.. ++|+||++...+.|+.-..+-.++..+... ..+
T Consensus 864 Gri~vf~v~~~kL-~lv~~~~v~g~v~al~~~-~g~Lla~ig----~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~-~~~ 936 (1158)
T 3ei3_A 864 GRIVVFQYSDGKL-QTVAEKEVKGAVYSMVEF-NGKLLASIN----STVRLYEWTTEKELRTECNHYNNIMALYLK-TKG 936 (1158)
T ss_dssp EEEEEEEEETTEE-EEEEEEEESSCEEEEEEE-TTEEEEEET----TEEEEEEECTTSCEEEEEEECCCSCEEEEE-EET
T ss_pred eEEEEEEEECCEE-EEEEEEEcCCcCEEEeee-CCEEEEEcC----CEEEEEECCCCceEEEEeeccccEEEEEEe-ccC
Confidence 6788888876553 2222 3567776533 457777653 599999998766665211111122222221 236
Q ss_pred CEEEEEeCCCcEEE--EECCCCeeEEeccc-CCCceEEEEEcCCCcEEEEEeCCcEEEEeC
Q 011452 291 EKLLVKQENENLQI--LDVRNFELTEVSRT-EFMTPSAFIFLYENQLFLTFRNRTVAVWNF 348 (485)
Q Consensus 291 ~~lls~s~D~tIkI--WDv~tg~~~~~l~g-h~~~v~avaFspdg~llaS~sD~TIklWd~ 348 (485)
+++++|-.=+.|.+ |+...+++...-+. +..++.++.|..++..+++-.++.|-+...
T Consensus 937 ~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 937 DFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQK 997 (1158)
T ss_dssp TEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEE
T ss_pred CEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEec
Confidence 78888864444444 66666666665433 566899999998876555434888877754
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.26 E-value=4.2 Score=42.95 Aligned_cols=152 Identities=14% Similarity=0.194 Sum_probs=91.4
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeeEEecccC----CCceEEEEEcCCCcEEEEEeCCcEEEEeCC-Cc-----------
Q 011452 288 QFNEKLLVKQENENLQILDVRNFELTEVSRTE----FMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GE----------- 351 (485)
Q Consensus 288 ~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh----~~~v~avaFspdg~llaS~sD~TIklWd~~-G~----------- 351 (485)
..|..+... .++.||.=++..+..-+.+.-. +..+..+..||+|++||-.++.+|.|=.+- +.
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 334444443 3477777777643333343222 336778999999999999999999998874 32
Q ss_pred -EEEEeecCCCC-CCCCCeeEEEECCCC---CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCe--EEEEecCCCCCCCCc
Q 011452 352 -LVTSFEDHLLW-HPDCNTNNIYITSDQ---DLIISYCKADSDDPLAEGNAGSINISNILTGK--CLAKIRASNGLPAEN 424 (485)
Q Consensus 352 -ll~tl~gH~~~-~~~~~v~svafSpDG---~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk--~l~tl~gH~~~~~~~ 424 (485)
..+++.=.... .+...|..+-|.|-| ..|+.=.. |++||+||+.... .. +|+-..+
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts-----------D~~Ir~yDl~~s~~~P~-~L~k~~~----- 171 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE-----------DDTITMFDILNSQEKPI-VLNKPNN----- 171 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET-----------TSCEEEEETTCTTSCCE-EESCCCS-----
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEec-----------CCEEEEEEcccCCCCCc-chhcccc-----
Confidence 12233211100 011238899999943 45666554 7999999997522 12 3432110
Q ss_pred ccccCCCCCCCCccccccccccccccchhcccCCeEEEEEcCCCCEEEEec--CCCcEE
Q 011452 425 ECSCSGDYSSGSCNVKKHSHASRIRSTVAEALEDITALFYDEDRNEIYTGN--RHGLVH 481 (485)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~sl~fspDg~~LaSgs--~DgtVk 481 (485)
...+ ......|.+++|.++|=+||-.+ +.|-|.
T Consensus 172 --------------------~fg~----d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 172 --------------------SFGL----DARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp --------------------EEES----CSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred --------------------ccCC----CcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 0000 00114899999999999999965 888774
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.52 E-value=5 Score=37.72 Aligned_cols=194 Identities=11% Similarity=0.092 Sum_probs=100.5
Q ss_pred CCeEEEEeeCC-----CcEEEeecCCCe-----EEEEEcCC-cEEEEEEcCCceEEEEEcCCC---CeeEEEEecCCCeE
Q 011452 204 NGKVLTYSAQD-----SIYKVFDLKNYT-----MLYSISDK-NVQEIKISPGIMLLIFTKASG---HVPLKILSIEDGTV 269 (485)
Q Consensus 204 nG~~Las~s~D-----~tiKlWdl~~g~-----~l~tl~~~-~V~~VafSpg~~ll~sss~~~---D~tIklWdi~tG~~ 269 (485)
++++++.|+.+ ..+-++|+.+.+ .+..+... .-.+++.. ++.+.+.+..+. ...+.++|+.+++-
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 67888888755 468888987765 22222211 11122222 344444433222 14688899888764
Q ss_pred EEEeecCCccee-EEEEEecCCCEEEEEeCC-----CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-C--
Q 011452 270 LKSFNHLLHRNK-KVDFIEQFNEKLLVKQEN-----ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-N-- 340 (485)
Q Consensus 270 L~tl~~~~~~~~-~V~f~~~~~~~lls~s~D-----~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D-- 340 (485)
...-.-...+.. .+.. .++..++.|+.+ ..+.++|+.+.+-.+.-.-........+...++++++.++ +
T Consensus 141 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 141 SMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGT 218 (301)
T ss_dssp EEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred EECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCC
Confidence 332111112221 2222 234444556543 5689999999876554211111111122334788888887 4
Q ss_pred ---CcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 341 ---RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 341 ---~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
..|.++|.+...-..+.. ...+......+. -++++++-|+.+.. ..-..|-++|+.+.+-
T Consensus 219 ~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~i~v~GG~~~~------~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSWTTVTS--MTTPRCYVGATV--LRGRLYAIAGYDGN------SLLSSIECYDPIIDSW 281 (301)
T ss_dssp SBCCCEEEEETTTTEEEEECC--CSSCCBSCEEEE--ETTEEEEECCBCSS------SBEEEEEEEETTTTEE
T ss_pred cccceEEEEeCCCCcEEECCC--CCCcccceeEEE--ECCEEEEEcCcCCC------cccccEEEEcCCCCeE
Confidence 368899986443334432 111122122233 37788888765200 0114688899887764
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.59 E-value=4.2 Score=42.91 Aligned_cols=129 Identities=16% Similarity=0.191 Sum_probs=82.7
Q ss_pred CCCCeEEEEeeCCCcEEEeecCC---CeEEEEE---cCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCe-------
Q 011452 202 DVNGKVLTYSAQDSIYKVFDLKN---YTMLYSI---SDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGT------- 268 (485)
Q Consensus 202 ~pnG~~Las~s~D~tiKlWdl~~---g~~l~tl---~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~------- 268 (485)
..||.-|..+ +++.||.=++.. |+.+..= .-..|..+.+||.|.+|+-.. +.+|.|-.+..+.
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g---~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN---DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC---SSEEEEEECCTTCSCCCCHH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec---CCeEEEEEecCccccCcccc
Confidence 3577776654 579999888773 3333221 123678899999666666543 3689998887443
Q ss_pred -----EEEEeec------CCcceeEEEEEec--CCCEEEEEeCCCcEEEEECCCC--eeEEeccc---------CCCceE
Q 011452 269 -----VLKSFNH------LLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNF--ELTEVSRT---------EFMTPS 324 (485)
Q Consensus 269 -----~L~tl~~------~~~~~~~V~f~~~--~~~~lls~s~D~tIkIWDv~tg--~~~~~l~g---------h~~~v~ 324 (485)
..+++.- ....+.+|-|+|- .+..|++=-.|++||+||+... ++. ++.. +.+.|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 1234431 1345889999753 2567888789999999999963 223 3321 236677
Q ss_pred EEEEcCCCcEE
Q 011452 325 AFIFLYENQLF 335 (485)
Q Consensus 325 avaFspdg~ll 335 (485)
+++|.+++=.|
T Consensus 184 S~~Fg~~~lTL 194 (452)
T 3pbp_A 184 DLEFSKDGLTL 194 (452)
T ss_dssp EEEECTTSSCE
T ss_pred EEEEcCCCcEE
Confidence 88888766433
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.84 E-value=8.5 Score=36.19 Aligned_cols=195 Identities=13% Similarity=0.064 Sum_probs=99.9
Q ss_pred CCeEEEEeeCC-----CcEEEeecCCCeE--EEEEcCC-cEEEEEEcCCceEEEEEcCCCC--eeEEEEecCCCeEEEEe
Q 011452 204 NGKVLTYSAQD-----SIYKVFDLKNYTM--LYSISDK-NVQEIKISPGIMLLIFTKASGH--VPLKILSIEDGTVLKSF 273 (485)
Q Consensus 204 nG~~Las~s~D-----~tiKlWdl~~g~~--l~tl~~~-~V~~VafSpg~~ll~sss~~~D--~tIklWdi~tG~~L~tl 273 (485)
++++++.|+.+ ..+-++|+.+.+- +..+... .-.+++.-.+..+++++..... ..+.++|+++.+-...-
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 67888888754 3577888887762 2222211 1112222245455544332211 46778898887643321
Q ss_pred ecCCccee-EEEEEecCCCEEEEEeC-------CCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CC---
Q 011452 274 NHLLHRNK-KVDFIEQFNEKLLVKQE-------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NR--- 341 (485)
Q Consensus 274 ~~~~~~~~-~V~f~~~~~~~lls~s~-------D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~--- 341 (485)
.-...+.. .++. .++...+.|+. -..+.++|+.+.+-.+...-....-...+...++++++-++ ++
T Consensus 141 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 141 PMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLV 218 (302)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSB
T ss_pred CCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcc
Confidence 11111111 2332 23444444543 24689999998876554211111111112234788888887 53
Q ss_pred --cEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 342 --TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 342 --TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
.+.++|.+...-..+..... +...-..+ .-++++++-|+.+.. ..-..|-++|+.+.+-
T Consensus 219 ~~~~~~yd~~~~~W~~~~~~~~--~r~~~~~~--~~~~~i~v~GG~~~~------~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQVADMNM--CRRNAGVC--AVNGLLYVVGGDDGS------CNLASVEYYNPTTDKW 279 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSS--CCBSCEEE--EETTEEEEECCBCSS------SBCCCEEEEETTTTEE
T ss_pred cceEEEEeCCCCCEeeCCCCCC--ccccCeEE--EECCEEEEECCcCCC------cccccEEEEcCCCCeE
Confidence 68889986444444432211 11111222 237788888775211 1125689999988764
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.82 E-value=3.3 Score=40.15 Aligned_cols=67 Identities=6% Similarity=0.022 Sum_probs=45.0
Q ss_pred CCceEEEEEcCCCcEEEEEeCCcEEEEeCCC-c-------EEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCC
Q 011452 320 FMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-E-------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDP 391 (485)
Q Consensus 320 ~~~v~avaFspdg~llaS~sD~TIklWd~~G-~-------ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~ 391 (485)
-..+..++|.|+|.+.+. +++. ||-.+. . -..+--|...|+. -..++|-|+|.+.++ +
T Consensus 40 w~~~~~laf~P~G~LYaV-~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~---F~a~~fD~~G~LYav-~------- 105 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV-LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWNQ---FQFLFFDPNGYLYAV-S------- 105 (236)
T ss_dssp CTTCSEEEECTTSCEEEE-ETTE--EEEESCCCSTTCCHHHHCEEEECSCGGG---CSEEEECTTSCEEEE-E-------
T ss_pred cccceeEEECCCccEEEE-eCCe--EEEECCCCCCcccccccccEeccccccc---ceEEEECCCCCEEEe-C-------
Confidence 446779999999999988 7664 666431 1 0123333444521 478999999999999 4
Q ss_pred CCcCCCCeEEEEeC
Q 011452 392 LAEGNAGSINISNI 405 (485)
Q Consensus 392 ~~~~~DgtIklWdl 405 (485)
||.|.-|+-
T Consensus 106 -----dG~iyr~~p 114 (236)
T 1tl2_A 106 -----KDKLYKASP 114 (236)
T ss_dssp -----TTEEEEESC
T ss_pred -----CCEEEEeCC
Confidence 588866653
No 323
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.67 E-value=9.4 Score=43.55 Aligned_cols=34 Identities=26% Similarity=0.207 Sum_probs=28.3
Q ss_pred EEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE
Q 011452 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI 231 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl 231 (485)
+++.. ++..+|.+-+.|+++|+|++.+|+|+.+.
T Consensus 240 ~~~~~-~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 240 SMIFL-STYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEE-TTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEeec-CCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 44554 46778888899999999999999999886
No 324
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.90 E-value=24 Score=38.08 Aligned_cols=257 Identities=8% Similarity=-0.033 Sum_probs=144.4
Q ss_pred ccceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEee---cCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEE
Q 011452 95 RSKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLN---VTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (485)
Q Consensus 95 ~s~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~---g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~ 170 (485)
.+.|.+|... ..+|=.+..+|..|. | |....... .-.+..|++++-.++|...+. . .+ -+
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~GL~ry-D---G~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-T----~~-------Gl 84 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKGLFSY-D---GYSTQQHFTYGENNNTRIYCGVIIDNTYLYMG-T----DN-------GI 84 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSCEEEE-C---SSCEEECSCTTSTTSSCEEEEEEETTTEEEEE-E----TT-------EE
T ss_pred cceEEEEEECCCCCEEEEECCCcccc-C---CCceEEEEccCCCCCceEEEEEEcCCCcEEEE-e----CC-------Ce
Confidence 4678888887 556666778998764 4 43333221 112456999999888876653 2 22 23
Q ss_pred EEeEeccCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEE------EcCCcEEEEEEcCC
Q 011452 171 RIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS------ISDKNVQEIKISPG 244 (485)
Q Consensus 171 ~lw~i~~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~t------l~~~~V~~VafSpg 244 (485)
-.+|..++++.. ........+..+.. .+|.+.+. ..+ -+-.+|.++++...- +....|.++...++
T Consensus 85 ~~yd~~~~~f~~----~~~~~~~~i~~i~~--~~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~ 156 (758)
T 3ott_A 85 LVYNYRADRYEQ----PETDFPTDVRTMAL--QGDTLWLG-ALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKD 156 (758)
T ss_dssp EEEETTTTEECC----CSCCCCSCEEEEEE--ETTEEEEE-ETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTT
T ss_pred EEEeCCCCEEEC----cccCCCceEEEEEe--cCCcEEEE-cCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCC
Confidence 445544443311 00001122334443 36776664 334 466788877664322 22457999988866
Q ss_pred ceEEEEEcCCCCeeEEEEecCCCeEEEEeecC------CcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc
Q 011452 245 IMLLIFTKASGHVPLKILSIEDGTVLKSFNHL------LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT 318 (485)
Q Consensus 245 ~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~------~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g 318 (485)
+.+.++.. .-|-.+|..+++.. .+... ...+.++... .+++.|-++.. +-|-.+|..+++......-
T Consensus 157 g~lWigt~----~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d-~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 157 NQIYVGTY----NGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLED-TTRQCVWIGTE-GYLFQYFPSTGQIKQTEAF 229 (758)
T ss_dssp CCEEEEET----TEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEE-TTTTEEEEEEE-EEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEeC----CCHhhCccCCCceE-EecCCCccccccceeEEEEEE-CCCCEEEEEEC-CCCeEEcCCCCeEEeccCC
Confidence 66655532 24777888777643 22211 0124455432 33455566554 4588899988765432211
Q ss_pred CCCceEEEEEcCCCcEEEEEeCCcEEEEeCCCcEEEEeecCC---CCCCCCCeeEEEECCCCCEEEEE
Q 011452 319 EFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHL---LWHPDCNTNNIYITSDQDLIISY 383 (485)
Q Consensus 319 h~~~v~avaFspdg~llaS~sD~TIklWd~~G~ll~tl~gH~---~~~~~~~v~svafSpDG~~LaS~ 383 (485)
....|.+++..++|.+.+.. ++-+-++|.+...+..+.... ..-+...|.+|+..++|.+-+..
T Consensus 230 ~~~~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 230 HNNSIKSLALDGNGDLLAGT-DNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EEEEEEEEEECTTCCEEEEE-TTEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCeEEEEEEcCCCCEEEEe-CCceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 23458888888899988765 445777887633333332111 00112238999999999887754
No 325
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.90 E-value=1.1 Score=51.16 Aligned_cols=37 Identities=11% Similarity=0.285 Sum_probs=33.7
Q ss_pred eeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEec
Q 011452 368 TNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIR 415 (485)
Q Consensus 368 v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~ 415 (485)
+.+++.++|..+|++-|. |+++||||+.||+|+++..
T Consensus 238 ~~~~~~~~~~~~lftl~~-----------D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSL-----------DYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTTEEEEEET-----------TCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCcEEEEEEC-----------CCEEEEEECCCCCeEeeec
Confidence 678888999999999997 7999999999999999864
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.82 E-value=13 Score=34.92 Aligned_cols=193 Identities=8% Similarity=0.017 Sum_probs=95.0
Q ss_pred CeEEEEeeC--CCcEEEeecCCCeEE--EEEcCCc-EEEEEEcCCceEEEEEcCC--CCeeEEEEecCCCeEEEEeecCC
Q 011452 205 GKVLTYSAQ--DSIYKVFDLKNYTML--YSISDKN-VQEIKISPGIMLLIFTKAS--GHVPLKILSIEDGTVLKSFNHLL 277 (485)
Q Consensus 205 G~~Las~s~--D~tiKlWdl~~g~~l--~tl~~~~-V~~VafSpg~~ll~sss~~--~D~tIklWdi~tG~~L~tl~~~~ 277 (485)
+.+++.|+. ...+.++|..+.+-. ..+.... =.+++.-.+. +.+.+..+ .-..+.++|+.+++-...-.-..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNV-VYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTE-EEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCE-EEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 445555543 356777887776622 1222111 0112222344 44443321 12567888998876433221111
Q ss_pred ccee-EEEEEecCCCEEEEEeCC------CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-C---------
Q 011452 278 HRNK-KVDFIEQFNEKLLVKQEN------ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-N--------- 340 (485)
Q Consensus 278 ~~~~-~V~f~~~~~~~lls~s~D------~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D--------- 340 (485)
.+.. .++. .++..++.|+.+ ..+.++|+.+.+-.+...-........+...++++++-++ +
T Consensus 91 ~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 91 PRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEEC
T ss_pred cccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccccc
Confidence 1221 2222 234444556654 5689999999876554221111111112234888888776 3
Q ss_pred CcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 341 RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 341 ~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
..+.++|.....-..+..- ..+...-..+.+ ++++++.|+.+.. ..-..|.++|+.+++-
T Consensus 169 ~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~--~~~i~v~GG~~~~------~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPM--IEARKNHGLVFV--KDKIFAVGGQNGL------GGLDNVEYYDIKLNEW 228 (306)
T ss_dssp CCEEEEETTTTEEEEECCC--SSCCBSCEEEEE--TTEEEEECCEETT------EEBCCEEEEETTTTEE
T ss_pred ceEEEeCCCCCeEEECCCc--cchhhcceEEEE--CCEEEEEeCCCCC------CCCceEEEeeCCCCcE
Confidence 3478889864444444321 111111122222 7788887765210 0124688999988754
No 327
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=89.79 E-value=13 Score=34.80 Aligned_cols=221 Identities=9% Similarity=0.021 Sum_probs=106.1
Q ss_pred CeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCC---cCcccceeeecc
Q 011452 115 GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGK---PDAGFALFESES 191 (485)
Q Consensus 115 gtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~---~~~~~~lf~~~~ 191 (485)
..+..+|..+++-. .+..-+.......+..-++..++.++.++. -....+.++|+.+++ ...-..+- . .
T Consensus 31 ~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-----~~~~~~~~~d~~~~~~~~W~~~~~~p-~-~ 102 (301)
T 2vpj_A 31 DVVEKYDPKTQEWS-FLPSITRKRRYVASVSLHDRIYVIGGYDGR-----SRLSSVECLDYTADEDGVWYSVAPMN-V-R 102 (301)
T ss_dssp CCEEEEETTTTEEE-ECCCCSSCCBSCEEEEETTEEEEECCBCSS-----CBCCCEEEEETTCCTTCCCEEECCCS-S-C
T ss_pred eEEEEEcCCCCeEE-eCCCCChhhccccEEEECCEEEEEcCCCCC-----ccCceEEEEECCCCCCCeeEECCCCC-C-C
Confidence 36778887766522 222111111111122245666655443211 122356677776666 31100000 0 1
Q ss_pred ccCceEEEEeCCCCeEEEEeeCC-----CcEEEeecCCCe--EEEEEcCCc-EEEEEEcCCceEEEEEcCCC---CeeEE
Q 011452 192 LKWPGFVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYT--MLYSISDKN-VQEIKISPGIMLLIFTKASG---HVPLK 260 (485)
Q Consensus 192 ~~~~~~V~Fs~pnG~~Las~s~D-----~tiKlWdl~~g~--~l~tl~~~~-V~~VafSpg~~ll~sss~~~---D~tIk 260 (485)
.... .++. .++++++.|+.+ ..+-++|+.+.+ .+..+.... -.+++...+ .+.+.+..+. -..+.
T Consensus 103 r~~~-~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~ 178 (301)
T 2vpj_A 103 RGLA-GATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASG-VIYCLGGYDGLNILNSVE 178 (301)
T ss_dssp CBSC-EEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETT-EEEEECCBCSSCBCCCEE
T ss_pred ccce-eEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECC-EEEEECCCCCCcccceEE
Confidence 1111 2333 268999988754 357788888776 233333211 112222244 4444433221 25688
Q ss_pred EEecCCCeEEEEeecCCccee-EEEEEecCCCEEEEEeCC-----CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcE
Q 011452 261 ILSIEDGTVLKSFNHLLHRNK-KVDFIEQFNEKLLVKQEN-----ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQL 334 (485)
Q Consensus 261 lWdi~tG~~L~tl~~~~~~~~-~V~f~~~~~~~lls~s~D-----~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~l 334 (485)
++|+++++-...-.-...+.. .+.. .++..++.|+.+ ..+.++|+.+.+-.+...-........+...++++
T Consensus 179 ~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 256 (301)
T 2vpj_A 179 KYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRL 256 (301)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEE
Confidence 899988765432111111111 2222 234444556543 57999999998766553211111111223348888
Q ss_pred EEEEe-C-----CcEEEEeCC
Q 011452 335 FLTFR-N-----RTVAVWNFR 349 (485)
Q Consensus 335 laS~s-D-----~TIklWd~~ 349 (485)
++-++ + ..|.++|.+
T Consensus 257 ~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 257 YAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp EEECCBCSSSBEEEEEEEETT
T ss_pred EEEcCcCCCcccccEEEEcCC
Confidence 88887 5 357778875
No 328
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.85 E-value=16 Score=34.42 Aligned_cols=194 Identities=8% Similarity=-0.010 Sum_probs=101.4
Q ss_pred CCeEEEEeeCC----CcEEEeecCCCeE--EEEEcCCcE-EEEEEcCCceEEEEEcCC----CCeeEEEEecCCCeEEEE
Q 011452 204 NGKVLTYSAQD----SIYKVFDLKNYTM--LYSISDKNV-QEIKISPGIMLLIFTKAS----GHVPLKILSIEDGTVLKS 272 (485)
Q Consensus 204 nG~~Las~s~D----~tiKlWdl~~g~~--l~tl~~~~V-~~VafSpg~~ll~sss~~----~D~tIklWdi~tG~~L~t 272 (485)
++++++.|+.+ ..+-++|+.+.+- +..++.... .+++...+ .+.+.+..+ .-..+-++|+++.+-...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 68888888865 6778889888763 223322111 11222244 444443322 124688899988764332
Q ss_pred eecCCccee-EEEEEecCCCEEEEEeC---------CCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-C-
Q 011452 273 FNHLLHRNK-KVDFIEQFNEKLLVKQE---------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-N- 340 (485)
Q Consensus 273 l~~~~~~~~-~V~f~~~~~~~lls~s~---------D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D- 340 (485)
-.-...+.. .++. .++...+.++. -..+.++|+.+.+-.+...-........+...++++++-|+ +
T Consensus 134 ~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 211 (306)
T 3ii7_A 134 PSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNG 211 (306)
T ss_dssp CCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEET
T ss_pred CCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCC
Confidence 111111111 2222 23333444542 35589999999876555321111111122333888888876 4
Q ss_pred ----CcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 341 ----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 341 ----~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
..|.++|.....-..+.. ...+......+.+ ++++++.|+.+. .+.-..|.++|+.+.+-
T Consensus 212 ~~~~~~~~~yd~~~~~W~~~~~--~p~~r~~~~~~~~--~~~i~v~GG~~~------~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLNEWKMVSP--MPWKGVTVKCAAV--GSIVYVLAGFQG------VGRLGHILEYNTETDKW 275 (306)
T ss_dssp TEEBCCEEEEETTTTEEEECCC--CSCCBSCCEEEEE--TTEEEEEECBCS------SSBCCEEEEEETTTTEE
T ss_pred CCCCceEEEeeCCCCcEEECCC--CCCCccceeEEEE--CCEEEEEeCcCC------CeeeeeEEEEcCCCCeE
Confidence 367888986443333322 1111111223333 778888887521 01235789999988764
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.47 E-value=17 Score=34.40 Aligned_cols=192 Identities=11% Similarity=0.003 Sum_probs=98.7
Q ss_pred CCeEEEEeeC----C-----CcEEEeecCCCeEE--EEEcCC--cEEEEEEcCCceEEEEEcCCC---CeeEEEEecCCC
Q 011452 204 NGKVLTYSAQ----D-----SIYKVFDLKNYTML--YSISDK--NVQEIKISPGIMLLIFTKASG---HVPLKILSIEDG 267 (485)
Q Consensus 204 nG~~Las~s~----D-----~tiKlWdl~~g~~l--~tl~~~--~V~~VafSpg~~ll~sss~~~---D~tIklWdi~tG 267 (485)
++++++.|+. + ..+-++|+.+.+-. ..+... .-..+. ..+.++++. ..+. -..+.++|+++.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~G-G~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVG-GSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEEC-CEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEc-CCCCCcccccEEEECCCCC
Confidence 5778887775 2 46778888776622 122211 111222 244444433 2111 146788898887
Q ss_pred eEEEEeecCCccee-EEEEEecCCCEEEEEeCC-----CcEEEEECCCCeeEEecc--cCCCceEEEEEcCCCcEEEEEe
Q 011452 268 TVLKSFNHLLHRNK-KVDFIEQFNEKLLVKQEN-----ENLQILDVRNFELTEVSR--TEFMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 268 ~~L~tl~~~~~~~~-~V~f~~~~~~~lls~s~D-----~tIkIWDv~tg~~~~~l~--gh~~~v~avaFspdg~llaS~s 339 (485)
+-...-.-...+.. .++. .++..++.|+.+ ..+.++|+.+.+-..... ..-....++. .++++++-++
T Consensus 148 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAV--LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECC
T ss_pred eEeECCCCCccccceEEEE--ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeC
Confidence 64332111111111 2222 234444556543 568999999887654421 1111122232 3888888886
Q ss_pred -C-----CcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEE
Q 011452 340 -N-----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCL 411 (485)
Q Consensus 340 -D-----~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l 411 (485)
+ ..+.++|+....-..+.. ...+......+. -++++++-|+.+. ...-..|-++|+.+.+-.
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAP--MKHRRSALGITV--HQGRIYVLGGYDG------HTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCC--CSSCCBSCEEEE--ETTEEEEECCBCS------SCBCCEEEEEETTTTEEE
T ss_pred CCCCCccceEEEEeCCCCcEEECCC--CCCCccceEEEE--ECCEEEEEcCcCC------CcccceEEEEcCCCCEEe
Confidence 5 468899986444444432 111111112222 3778888877521 011357889999887643
No 330
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.01 E-value=9.6 Score=39.89 Aligned_cols=113 Identities=11% Similarity=0.065 Sum_probs=67.2
Q ss_pred EEEEeecCCcceeEEEEEecCCC-EEEEEeCCCcEEEEECCCCe---eEEecc-----c----CCCceEEEEEcCC----
Q 011452 269 VLKSFNHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRNFE---LTEVSR-----T----EFMTPSAFIFLYE---- 331 (485)
Q Consensus 269 ~L~tl~~~~~~~~~V~f~~~~~~-~lls~s~D~tIkIWDv~tg~---~~~~l~-----g----h~~~v~avaFspd---- 331 (485)
.+.++..-+..-+.++|. |++. +|+++...+.|++++..... .+..+. + ....+..++|.|+
T Consensus 5 ~v~~va~gL~~P~~~a~~-pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHS-GDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEEEESSEEEEECC-SSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEEEeccCCCCceEEEEC-CCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 334443323456788986 5664 68888889999999864321 111111 1 1346788999996
Q ss_pred CcEEEEEe-CC------------cEEEEeCC-C----------cEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 332 NQLFLTFR-NR------------TVAVWNFR-G----------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 332 g~llaS~s-D~------------TIklWd~~-G----------~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
+.+.++-+ +. .|.-|.+. + +.|.++......| . ...|+|.|||.+.++-+.
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H-~--g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH-L--GGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS-C--EEEEEECTTSCEEEEECC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc-c--CCcEeECCCCcEEEEeCC
Confidence 78888765 21 23335442 1 2333443111112 1 578999999999998764
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=86.73 E-value=21 Score=33.47 Aligned_cols=194 Identities=10% Similarity=0.009 Sum_probs=94.7
Q ss_pred CeEEEEeeCC----CcEEEeecCCCeEEE--EEcCCcE-EEEEEcCCceEEEEEcCCC---CeeEEEEecCCCeEEEEee
Q 011452 205 GKVLTYSAQD----SIYKVFDLKNYTMLY--SISDKNV-QEIKISPGIMLLIFTKASG---HVPLKILSIEDGTVLKSFN 274 (485)
Q Consensus 205 G~~Las~s~D----~tiKlWdl~~g~~l~--tl~~~~V-~~VafSpg~~ll~sss~~~---D~tIklWdi~tG~~L~tl~ 274 (485)
+++++.|+.+ ..+..+|+.+.+-.. .++.... .+++...+ .+.+.+..+. -..+.++|..+++-...-.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAG-LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT-EEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECC-EEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 4566666543 356778877765211 1221110 12222244 4444433221 1467889988876433211
Q ss_pred cCCccee-EEEEEecCCCEEEEEeCC-----CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CC------
Q 011452 275 HLLHRNK-KVDFIEQFNEKLLVKQEN-----ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NR------ 341 (485)
Q Consensus 275 ~~~~~~~-~V~f~~~~~~~lls~s~D-----~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~------ 341 (485)
-...+.. .++. .++..++.|+.+ ..+.++|+.+.+-.+...-........+...++++++-|+ ++
T Consensus 95 ~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 95 MRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp CSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEEC
T ss_pred CCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccc
Confidence 1111111 2322 234445556644 3578899998876554211111111112234788888776 32
Q ss_pred -cEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEE
Q 011452 342 -TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCL 411 (485)
Q Consensus 342 -TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l 411 (485)
.+.++|.....-..+.. ...+......++ -++++++.|+.+.. ..-..+.++|+.+++-.
T Consensus 173 ~~~~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAE--MSTRRSGAGVGV--LNNLLYAVGGHDGP------LVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp CCEEEEETTTTEEEEECC--CSSCCBSCEEEE--ETTEEEEECCBSSS------SBCCCEEEEETTTTEEE
T ss_pred cEEEEEeCCCCcEEECCC--CccccccccEEE--ECCEEEEECCCCCC------cccceEEEEeCCCCCEe
Confidence 47888886433333321 111111112222 37788888775210 11256899999887653
No 332
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=86.19 E-value=32 Score=35.20 Aligned_cols=198 Identities=17% Similarity=0.194 Sum_probs=108.9
Q ss_pred CCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCC-CeEEEEeecCCc-
Q 011452 202 DVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIMLLIFTKASGHVPLKILSIED-GTVLKSFNHLLH- 278 (485)
Q Consensus 202 ~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~t-G~~L~tl~~~~~- 278 (485)
.|..++||-=+ ..++.|+|+++-+.+.+.. ...|.=-+|=...+|+.-.. ..|.-|+++. -.+.+-|.-|..
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~----taVyHWs~~~~s~P~kvFdR~~~L 149 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTD----NAVYHWSMEGESQPVKMFDRHSSL 149 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEES----SEEEEEESSTTCCCEEEEECCGGG
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcC----CcEEEEcccCCCCCceeeecchhc
Confidence 47888888877 7899999999999887765 45565555554444444322 4799999974 356777764422
Q ss_pred -ceeEEEEEe-cCCCEEEE-E--e----CCCcEEEEECCCCeeEEecccCCCceEEEEE--cCC-CcEEEEEeC----Cc
Q 011452 279 -RNKKVDFIE-QFNEKLLV-K--Q----ENENLQILDVRNFELTEVSRTEFMTPSAFIF--LYE-NQLFLTFRN----RT 342 (485)
Q Consensus 279 -~~~~V~f~~-~~~~~lls-~--s----~D~tIkIWDv~tg~~~~~l~gh~~~v~avaF--spd-g~llaS~sD----~T 342 (485)
...=+.+.. ++..-++. | + -.|.++|+.++.+ .-+.+.||...--.+.+ .+. .++|+-+.. +.
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 222344432 33333322 3 2 2378999999954 55677788633222211 112 223333322 34
Q ss_pred EEEEeCC----CcE------EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEE
Q 011452 343 VAVWNFR----GEL------VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLA 412 (485)
Q Consensus 343 IklWd~~----G~l------l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~ 412 (485)
+.|=++. |.. +.-+-... ...|- =-++.+|+--..|---++ -|.|-|+|++||.|+.
T Consensus 229 LhIiEi~~~~~~~~~f~kk~vdi~fppe-a~~DF-PVamqvs~kygviyviTK-----------~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 229 LHIIEVGTPPTGNQPFPKKAVDVFFPPE-AQNDF-PVAMQISEKHDVVFLITK-----------YGYIHLYDLETGTCIY 295 (365)
T ss_dssp EEEEECSSCCTTCCCCCCEEEEECCCTT-CTTCC-EEEEEEETTTTEEEEEET-----------TSEEEEEETTTCCEEE
T ss_pred EEEEEcCCCCCCCCCcccccceeeCCcc-ccCCc-eEEEEecccCCEEEEEeC-----------CcEEEEEEcccCcEEE
Confidence 5555541 110 00000000 00111 123444444444444444 4999999999999998
Q ss_pred EecCCC
Q 011452 413 KIRASN 418 (485)
Q Consensus 413 tl~gH~ 418 (485)
.-+=..
T Consensus 296 ~nrIS~ 301 (365)
T 2xzh_A 296 MNRISG 301 (365)
T ss_dssp EEECCS
T ss_pred EeccCC
Confidence 765543
No 333
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=84.88 E-value=44 Score=35.55 Aligned_cols=198 Identities=16% Similarity=0.200 Sum_probs=108.6
Q ss_pred CCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEE-cCCceEEEEEcCCCCeeEEEEecCC-CeEEEEeecCCc
Q 011452 202 DVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKI-SPGIMLLIFTKASGHVPLKILSIED-GTVLKSFNHLLH 278 (485)
Q Consensus 202 ~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~~V~~Vaf-Spg~~ll~sss~~~D~tIklWdi~t-G~~L~tl~~~~~ 278 (485)
.|..++||-=+ ..++.|+|+++-+.+.+.. .+.|.=-+| ||...-+++ +..|.-|+++. -.+.+-|.-|..
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT-----~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-----DNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC-----SSEEEEEESSSSCCCEEEEECCGG
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc-----CCeeEEecccCCCCchhheecchh
Confidence 47788888776 7899999999998887764 333333333 344333333 15899999963 356777764422
Q ss_pred --ceeEEEEEe-cCCCEEEE-E--e----CCCcEEEEECCCCeeEEecccCCCceEEEEEc--CC-CcEEEEEeC----C
Q 011452 279 --RNKKVDFIE-QFNEKLLV-K--Q----ENENLQILDVRNFELTEVSRTEFMTPSAFIFL--YE-NQLFLTFRN----R 341 (485)
Q Consensus 279 --~~~~V~f~~-~~~~~lls-~--s----~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFs--pd-g~llaS~sD----~ 341 (485)
...=+.+.. ++..-++. | + -.|.++|+.++. +.-+.+.||...--.+.+. +. .++|+-+.. +
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 222344432 33333332 2 2 347899999994 4556777886433222221 11 133333322 4
Q ss_pred cEEEEeCC----CcE---EEEee--cCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEE
Q 011452 342 TVAVWNFR----GEL---VTSFE--DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLA 412 (485)
Q Consensus 342 TIklWd~~----G~l---l~tl~--gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~ 412 (485)
.+.|-++. |.. .+..+ --.....|- =-++.+|+.-..|---.+ -|.|-|+|++||.|+.
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DF-Pvamqvs~kygviyviTK-----------~G~i~lyDleTgt~i~ 294 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDF-PVAMQISEKHDVVFLITK-----------YGYIHLYDLETGTCIY 294 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCC-EEEEEEETTTTEEEEEET-----------TSEEEEEETTTCCEEE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCc-eeEEEecccCCEEEEEec-----------CceEEEEecccceeee
Confidence 55555541 110 00000 000000111 135556666665555555 5999999999999998
Q ss_pred EecCCC
Q 011452 413 KIRASN 418 (485)
Q Consensus 413 tl~gH~ 418 (485)
.-+-.+
T Consensus 295 ~nrIs~ 300 (494)
T 1bpo_A 295 MNRISG 300 (494)
T ss_dssp EEECCS
T ss_pred eecccC
Confidence 765443
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.64 E-value=11 Score=37.98 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=65.2
Q ss_pred EEEeeCCCcEEEeecCCCeEEEEEcCC---cEEEEE-Ec-C-CceEEEEEcCCCCeeEEEEecCCCeEEEEeecC-Ccce
Q 011452 208 LTYSAQDSIYKVFDLKNYTMLYSISDK---NVQEIK-IS-P-GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHL-LHRN 280 (485)
Q Consensus 208 Las~s~D~tiKlWdl~~g~~l~tl~~~---~V~~Va-fS-p-g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~-~~~~ 280 (485)
+.-++.|+.+.-.|.++|+.+-++... .+.... .. + ++..++... ..|+.|..++.++|.....+.-. +-..
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p-~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEP-FGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECC-STTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEE-CCCCEEEEEECCCCcEEeeeccccceec
Confidence 344567888888888888888777532 211110 00 1 223333311 23478888888888666555410 0001
Q ss_pred eEEEEE------e----cCCCEEEEEeCCCcEEEEECCCCeeEEeccc
Q 011452 281 KKVDFI------E----QFNEKLLVKQENENLQILDVRNFELTEVSRT 318 (485)
Q Consensus 281 ~~V~f~------~----~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g 318 (485)
..+.+. . ..++.+.+++.++++--.|++||+.+..+..
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 112210 0 0467888999999999999999999888753
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.99 E-value=5.7 Score=43.42 Aligned_cols=101 Identities=13% Similarity=-0.011 Sum_probs=66.7
Q ss_pred cEEEEECCC----CeeEEecccCCCceEEEEEcCCCcEEEEEe--CCcEEEEeCC-------CcE-------EEEeecCC
Q 011452 301 NLQILDVRN----FELTEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-------GEL-------VTSFEDHL 360 (485)
Q Consensus 301 tIkIWDv~t----g~~~~~l~gh~~~v~avaFspdg~llaS~s--D~TIklWd~~-------G~l-------l~tl~gH~ 360 (485)
.|++.|.+. +..+..+..-...+-.+-++|||++++.++ +.||-+.|++ +++ +...+--.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 588999886 332222212233455578899999998887 9999999975 222 33333111
Q ss_pred CCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCC----------eEEEEecCCC
Q 011452 361 LWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTG----------KCLAKIRASN 418 (485)
Q Consensus 361 ~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TG----------k~l~tl~gH~ 418 (485)
. -.-.+|.++| ..-+... -|..|--||+... ..+.++.-|.
T Consensus 379 G------PlHt~Fd~~G-~aYTtlf----------idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y 429 (638)
T 3sbq_A 379 G------PLHTTFDGRG-NAYTTLF----------IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY 429 (638)
T ss_dssp C------EEEEEECSSS-EEEEEET----------TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred c------ccEEEECCCC-ceEeeee----------ecceEEEEeccHHHHHhcCccCCeeeecccccc
Confidence 1 4678999999 4444443 2688999999864 5777887665
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=82.69 E-value=6.8 Score=37.91 Aligned_cols=126 Identities=12% Similarity=0.078 Sum_probs=66.7
Q ss_pred CEEEEEeCCCeEEeeecccCc------EEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCC
Q 011452 106 DIVFALAQSGVCAAFCRETNQ------RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGK 179 (485)
Q Consensus 106 ~~ias~s~dgtiklW~~~tG~------~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~ 179 (485)
-+|+...+| ++..=...++. ++.++-..-=..+..+||+|||.+-+. + .+ +|+.+....
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~----~G---------~Ly~~~~~t 69 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-L----ND---------KIYKGTPPT 69 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-E----TT---------EEEEESCCC
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-e----CC---------eEEEECCCC
Confidence 456666666 55543333333 222332200125779999999996655 3 22 255543211
Q ss_pred cCcccceeeec----cccCc--eEEEEeCCCCeEEEEeeCCCcEEEeecCC-CeE--E---EEEcC---CcEEEEEEcCC
Q 011452 180 PDAGFALFESE----SLKWP--GFVEFDDVNGKVLTYSAQDSIYKVFDLKN-YTM--L---YSISD---KNVQEIKISPG 244 (485)
Q Consensus 180 ~~~~~~lf~~~----~~~~~--~~V~Fs~pnG~~Las~s~D~tiKlWdl~~-g~~--l---~tl~~---~~V~~VafSpg 244 (485)
.+.+..|..+ ..+|- .++.|+ |||.+.++ .|+.|.=|+-.+ +.- + ..+.+ ..+..|.|.|+
T Consensus 70 -~~~~~W~~s~t~IG~~Gw~~F~a~~fD-~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~ 145 (236)
T 1tl2_A 70 -HDNDNWMGRAKKIGNGGWNQFQFLFFD-PNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPN 145 (236)
T ss_dssp -STTCCHHHHCEEEECSCGGGCSEEEEC-TTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTT
T ss_pred -CCcccccccccEecccccccceEEEEC-CCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCC
Confidence 1112233321 11222 368897 89998887 568776667533 111 0 11111 46889999998
Q ss_pred ceEEEE
Q 011452 245 IMLLIF 250 (485)
Q Consensus 245 ~~ll~s 250 (485)
+.|-+.
T Consensus 146 G~Lyav 151 (236)
T 1tl2_A 146 GYLYAV 151 (236)
T ss_dssp SCEEEE
T ss_pred ceEEEE
Confidence 877655
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=82.30 E-value=26 Score=42.36 Aligned_cols=196 Identities=15% Similarity=0.185 Sum_probs=100.9
Q ss_pred CCCCeEEEEeeCCCcEEEeecCCCeEEEEEc-CCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCC-CeEEEEeecCC--
Q 011452 202 DVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKISPGIMLLIFTKASGHVPLKILSIED-GTVLKSFNHLL-- 277 (485)
Q Consensus 202 ~pnG~~Las~s~D~tiKlWdl~~g~~l~tl~-~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~t-G~~L~tl~~~~-- 277 (485)
.|..++||-=+ ..++.|+|+.+-+.+.+.. ...|.=-+|=...+|+.-.. ..|.-|++++ -.+.+-|.-|.
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~----~aVyHW~~~~~s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTD----NAVYHWSMEGESQPVKMFDRHSSL 148 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcC----CeEEEeccCCCCccHHHHhcchhc
Confidence 36778888766 7899999998877766553 33443334443334433311 4799999963 24455554331
Q ss_pred cceeEEEEEe-cCCCEEEE-E------eCCCcEEEEECCCCeeEEecccCCCceEEEEE---cCCCcEEEEEeC----Cc
Q 011452 278 HRNKKVDFIE-QFNEKLLV-K------QENENLQILDVRNFELTEVSRTEFMTPSAFIF---LYENQLFLTFRN----RT 342 (485)
Q Consensus 278 ~~~~~V~f~~-~~~~~lls-~------s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaF---spdg~llaS~sD----~T 342 (485)
....=|.+.. ++..-++. | .-.|.++|+.++. +..+.+.||...--.+.+ .+..++|.-+.. +.
T Consensus 149 ~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCce
Confidence 1112233322 33333332 2 1458999999994 445667788654433333 222333332222 35
Q ss_pred EEEEeCC-C-cEEEEeecCC-------CCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEE
Q 011452 343 VAVWNFR-G-ELVTSFEDHL-------LWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAK 413 (485)
Q Consensus 343 IklWd~~-G-~ll~tl~gH~-------~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~t 413 (485)
+.|=++. . .--..|..-. ....|-. .++.+|+.-..|.--++ -|.|-+.|+.||.|+..
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfp-v~~~vs~k~g~iy~itk-----------~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP-VAMQISEKHDVVFLITK-----------YGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEEEecCCCccCCCCCccccccccCCcccccCcc-eEEEeccccCEEEEEec-----------CceEEEEecccchhhhh
Confidence 5555541 1 0000110000 0000111 23444554444444444 48999999999999865
Q ss_pred ec
Q 011452 414 IR 415 (485)
Q Consensus 414 l~ 415 (485)
=+
T Consensus 296 ~r 297 (1630)
T 1xi4_A 296 NR 297 (1630)
T ss_pred cc
Confidence 44
No 338
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=80.19 E-value=40 Score=31.77 Aligned_cols=195 Identities=9% Similarity=0.006 Sum_probs=97.2
Q ss_pred CCCeEEEEeeC----CCcEEEeecCCCeEEE--EEcCC-cEEEEEEcCCceEEEEEcC---CC---CeeEEEEecCCCeE
Q 011452 203 VNGKVLTYSAQ----DSIYKVFDLKNYTMLY--SISDK-NVQEIKISPGIMLLIFTKA---SG---HVPLKILSIEDGTV 269 (485)
Q Consensus 203 pnG~~Las~s~----D~tiKlWdl~~g~~l~--tl~~~-~V~~VafSpg~~ll~sss~---~~---D~tIklWdi~tG~~ 269 (485)
.++++++.|+. -..+.++|+.+.+-.. .++.. .-.+++...+..++..+.. +. ...+.++|+.+.+-
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 35677777763 2467788887766321 22211 1112222244444433210 11 13578889888764
Q ss_pred EEEeecCCccee-EEEEEecCCCEEEEEeCC-----CcEEEEECCCCeeEEecccC--CCceEEEEEcCCCcEEEEEe-C
Q 011452 270 LKSFNHLLHRNK-KVDFIEQFNEKLLVKQEN-----ENLQILDVRNFELTEVSRTE--FMTPSAFIFLYENQLFLTFR-N 340 (485)
Q Consensus 270 L~tl~~~~~~~~-~V~f~~~~~~~lls~s~D-----~tIkIWDv~tg~~~~~l~gh--~~~v~avaFspdg~llaS~s-D 340 (485)
...-.-...+.. .++. .++..++.|+.+ ..+.++|+.+.+-.+...-. -....++. .++++++-|+ +
T Consensus 103 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV--LNRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred eECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE--ECCEEEEEeCCC
Confidence 322111111111 2222 234444455532 57899999988765542111 11112232 3788888876 4
Q ss_pred -----CcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEE
Q 011452 341 -----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCL 411 (485)
Q Consensus 341 -----~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l 411 (485)
..+.++|.....-..+.. ...+...-..+.+ ++++++-|+.+. ...-..+.++|+.+.+-.
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~--~p~~r~~~~~~~~--~~~iyv~GG~~~------~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITA--MNTIRSGAGVCVL--HNCIYAAGGYDG------QDQLNSVERYDVETETWT 244 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCC--CSSCCBSCEEEEE--TTEEEEECCBCS------SSBCCCEEEEETTTTEEE
T ss_pred CCCcCceEEEEeCCCCeEeeCCC--CCCccccceEEEE--CCEEEEEeCCCC------CCccceEEEEeCCCCcEE
Confidence 358888886443333332 1111221223333 778888876521 011357899999887643
No 339
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.76 E-value=1.5 Score=50.99 Aligned_cols=37 Identities=11% Similarity=0.285 Sum_probs=33.0
Q ss_pred eeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEec
Q 011452 368 TNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIR 415 (485)
Q Consensus 368 v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~ 415 (485)
+.+++.++|..+|++-|. |+++||||+.||+|+++..
T Consensus 240 ~vs~~~~~~~~~lftL~~-----------D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSL-----------DYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBT-----------TCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeC-----------CCEEEEEECCCCCeEEeec
Confidence 567788899999999997 7999999999999999853
No 340
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.76 E-value=13 Score=42.95 Aligned_cols=34 Identities=26% Similarity=0.207 Sum_probs=28.3
Q ss_pred EEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEEEE
Q 011452 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI 231 (485)
Q Consensus 197 ~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~tl 231 (485)
+++.. ++..+|.+-+.|+++|+||+.+++|+++.
T Consensus 242 s~~~~-~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 242 SMIFL-STYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CCEEE-TTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred Eeecc-CCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34443 57788888899999999999999999886
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=74.57 E-value=58 Score=31.11 Aligned_cols=146 Identities=9% Similarity=0.039 Sum_probs=71.2
Q ss_pred eeEEEEecCCCeEEE--EeecCCcce-eEEEEEecCCCEEEEEeC------CCcEEEEEC--CCCeeEEeccc--CCCce
Q 011452 257 VPLKILSIEDGTVLK--SFNHLLHRN-KKVDFIEQFNEKLLVKQE------NENLQILDV--RNFELTEVSRT--EFMTP 323 (485)
Q Consensus 257 ~tIklWdi~tG~~L~--tl~~~~~~~-~~V~f~~~~~~~lls~s~------D~tIkIWDv--~tg~~~~~l~g--h~~~v 323 (485)
..+.++|+++.+-.. .+... ... ..++.. ++..++.|+. -..+.++|+ .+.+-.+...- .....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~-~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWY-GTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSC-CCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred ccEEEEeCCCCcEEECCCCCCC-CcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 478889998876433 33210 111 233322 2444445553 245777887 66655443211 11111
Q ss_pred EEEEEcCCCcEEEEEe-C----------------------CcEEEEeCC-C--cEEEEeecCCCCCCCCCeeEEEECCCC
Q 011452 324 SAFIFLYENQLFLTFR-N----------------------RTVAVWNFR-G--ELVTSFEDHLLWHPDCNTNNIYITSDQ 377 (485)
Q Consensus 324 ~avaFspdg~llaS~s-D----------------------~TIklWd~~-G--~ll~tl~gH~~~~~~~~v~svafSpDG 377 (485)
...+...++++++-|+ + ..+.++|++ . +.+..+...... ..++.-++
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-------~~~~~~~~ 317 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY-------GVSLPWNN 317 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS-------SEEEEETT
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc-------ceeEEeCC
Confidence 2223455788888876 3 257788985 3 244444322211 12234588
Q ss_pred CEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 378 DLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 378 ~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
++++-|+.+. + +..-..|-+.++.++|.+....-|
T Consensus 318 ~i~v~GG~~~--~---~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 318 SLLIIGGETA--G---GKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp EEEEEEEECG--G---GCEEEEEEEEEC-CCSCEEEC---
T ss_pred EEEEEeeeCC--C---CCEeeeEEEEEEcCcEeEeeeccc
Confidence 8888888620 0 000134555699999887765544
No 342
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.24 E-value=10 Score=41.33 Aligned_cols=69 Identities=14% Similarity=0.216 Sum_probs=44.8
Q ss_pred eeEEEECCCCCEEEEEecCCCCCC--CCcCCCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCccccccccc
Q 011452 368 TNNIYITSDQDLIISYCKADSDDP--LAEGNAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHA 445 (485)
Q Consensus 368 v~svafSpDG~~LaS~s~d~~~d~--~~~~~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (485)
--+|+|+|+|.++|.-..+..+.. ..-+ .+.+-+-+..+|+...-+.++.+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~g-nn~~~~~~~~~g~~~rf~~~P~g-------------------------- 530 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMG-NNQMLCADPATGEIRRFMVGPIG-------------------------- 530 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTC-SCEEEEECTTTCCEEEEEECCTT--------------------------
T ss_pred CcceEECCCCCEEEEecCCCcccccccccc-cceEEEEeCCCCeEEEEEeCCCC--------------------------
Confidence 357999999998886432100000 0001 12344556677888877877653
Q ss_pred cccccchhcccCCeEEEEEcCCCCEEEEe
Q 011452 446 SRIRSTVAEALEDITALFYDEDRNEIYTG 474 (485)
Q Consensus 446 ~~~~~~~~~~l~~V~sl~fspDg~~LaSg 474 (485)
..++.++|+||+++|...
T Consensus 531 -----------aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 -----------CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp -----------CEEEEEEECTTSSEEEEE
T ss_pred -----------ccCcCeeECCCCCEEEEE
Confidence 278999999999998765
No 343
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=72.88 E-value=1.1e+02 Score=32.97 Aligned_cols=258 Identities=9% Similarity=0.009 Sum_probs=140.4
Q ss_pred ccceEEEEEe-cCEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEe
Q 011452 95 RSKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (485)
Q Consensus 95 ~s~V~~i~~s-~~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw 173 (485)
.+.|.+|... +..|-.++.+|. -.+|..+++.... .......|+++.. .+|...+. + .+ -+-..
T Consensus 62 ~~~i~~i~~d~~g~lWigT~~Gl-~~yd~~~~~f~~~-~~~~~~~i~~i~~-~~g~lWig-t----~~-------Gl~~~ 126 (758)
T 3ott_A 62 NTRIYCGVIIDNTYLYMGTDNGI-LVYNYRADRYEQP-ETDFPTDVRTMAL-QGDTLWLG-A----LN-------GLYTY 126 (758)
T ss_dssp SSCEEEEEEETTTEEEEEETTEE-EEEETTTTEECCC-SCCCCSCEEEEEE-ETTEEEEE-E----TT-------EEEEE
T ss_pred CceEEEEEEcCCCcEEEEeCCCe-EEEeCCCCEEECc-ccCCCceEEEEEe-cCCcEEEE-c----CC-------cceeE
Confidence 4668888777 667777888875 5788877654321 1112335888765 56765543 2 12 23334
Q ss_pred EeccCCcCcccceeee----ccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCeEEE-EEc------CCcEEEEEEc
Q 011452 174 YIRRGKPDAGFALFES----ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SIS------DKNVQEIKIS 242 (485)
Q Consensus 174 ~i~~G~~~~~~~lf~~----~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~~l~-tl~------~~~V~~VafS 242 (485)
+..++++ ..+.. .....+..+..+ .+|.+.+.. .+| +-.+|..+++... .+. ...|.++...
T Consensus 127 ~~~~~~~----~~~~~~~~~l~~~~i~~i~~d-~~g~lWigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 199 (758)
T 3ott_A 127 QLQSRKL----TSFDTRRNGLPNNTIYSIIRT-KDNQIYVGT-YNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLED 199 (758)
T ss_dssp ETTTCCE----EEECHHHHCCSCSCEEEEEEC-TTCCEEEEE-TTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEE
T ss_pred eCCCCeE----EEeccCCCCcCCCeEEEEEEc-CCCCEEEEe-CCC-HhhCccCCCceEEecCCCccccccceeEEEEEE
Confidence 5444443 11210 011234456665 588887643 344 5567877776432 222 1248888887
Q ss_pred C-CceEEEEEcCCCCeeEEEEecCCCeEEEEeecC-CcceeEEEEEecCCCEEEEEeCCCcEEEEECCCCeeEEeccc--
Q 011452 243 P-GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHL-LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT-- 318 (485)
Q Consensus 243 p-g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~-~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~tg~~~~~l~g-- 318 (485)
+ ++.|.++.. .-|..+|..+++... +... ...+.++.. ..++.|.++..+ -|-++|..+++.......
T Consensus 200 ~~~~~lWigt~----~Gl~~~~~~~~~~~~-~~~l~~~~i~~i~~--d~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~ 271 (758)
T 3ott_A 200 TTRQCVWIGTE----GYLFQYFPSTGQIKQ-TEAFHNNSIKSLAL--DGNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSR 271 (758)
T ss_dssp TTTTEEEEEEE----EEEEEEETTTTEEEE-EEEEEEEEEEEEEE--CTTCCEEEEETT-EEEEECCTTSCCEEECCCTT
T ss_pred CCCCEEEEEEC----CCCeEEcCCCCeEEe-ccCCCCCeEEEEEE--cCCCCEEEEeCC-ceeEEecCCCcEEEEEcCCC
Confidence 5 554444421 357788988876432 2211 123444442 335667666654 588899887765433211
Q ss_pred -----CCCceEEEEEcCCCcEEEEEeCCcEEEEeCCCcEE-EEeecCCCCCCCCCeeEEEECCCCCEEEEE
Q 011452 319 -----EFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELV-TSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (485)
Q Consensus 319 -----h~~~v~avaFspdg~llaS~sD~TIklWd~~G~ll-~tl~gH~~~~~~~~v~svafSpDG~~LaS~ 383 (485)
....|+++....+|.+-+....| +-+........ ..+......-....|.+++-.++|.+-+..
T Consensus 272 ~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt 341 (758)
T 3ott_A 272 NIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG 341 (758)
T ss_dssp CTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE
T ss_pred CcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEee
Confidence 12468888888888887755455 54444332211 111110000011238899999999988764
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=72.06 E-value=66 Score=30.24 Aligned_cols=204 Identities=9% Similarity=0.001 Sum_probs=97.6
Q ss_pred CCCeEEEEeeC-------C----CcEEEeecCCCeEE--EEEcCCcE-EEEEEcCCceEEEEEcC------CCCeeEEEE
Q 011452 203 VNGKVLTYSAQ-------D----SIYKVFDLKNYTML--YSISDKNV-QEIKISPGIMLLIFTKA------SGHVPLKIL 262 (485)
Q Consensus 203 pnG~~Las~s~-------D----~tiKlWdl~~g~~l--~tl~~~~V-~~VafSpg~~ll~sss~------~~D~tIklW 262 (485)
.++++++.|+. . ..+-++|+.+.+-. ..++...- .+++...+ .+.+.+.. ..-..+-++
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEE
Confidence 46777777773 1 12667788776631 12221110 11222234 44444331 112568889
Q ss_pred ecCCCeEEEEeecCCccee-EEEEEecCCCEEEEEeC-C-----CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEE
Q 011452 263 SIEDGTVLKSFNHLLHRNK-KVDFIEQFNEKLLVKQE-N-----ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLF 335 (485)
Q Consensus 263 di~tG~~L~tl~~~~~~~~-~V~f~~~~~~~lls~s~-D-----~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~ll 335 (485)
|+.+++-...-.-...+.. .++. .++..++.|+. + ..+.++|+.+.+-.+...-........+...+++++
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 200 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRII 200 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE
T ss_pred CCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEE
Confidence 9988754321111111111 2222 22334445654 2 578999999887655432111111112223488888
Q ss_pred EEEe-CC-----cEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCC--CC-CCcCCCCeEEEEeCC
Q 011452 336 LTFR-NR-----TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSD--DP-LAEGNAGSINISNIL 406 (485)
Q Consensus 336 aS~s-D~-----TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~--d~-~~~~~DgtIklWdl~ 406 (485)
+.|+ ++ .+.++|.+...-..+.. ...+......+. -++++++.|+.+... +. .....-..|-++|+.
T Consensus 201 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 276 (315)
T 4asc_A 201 VAAGVTDTGLTSSAEVYSITDNKWAPFEA--FPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEE 276 (315)
T ss_dssp EEEEECSSSEEEEEEEEETTTTEEEEECC--CSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT
T ss_pred EEeccCCCCccceEEEEECCCCeEEECCC--CCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCC
Confidence 8887 54 57788886444444432 111222122232 377888877752100 00 000001357789998
Q ss_pred CCeEEEE
Q 011452 407 TGKCLAK 413 (485)
Q Consensus 407 TGk~l~t 413 (485)
+.+-...
T Consensus 277 ~~~W~~~ 283 (315)
T 4asc_A 277 EKKWEGV 283 (315)
T ss_dssp TTEEEEE
T ss_pred CChhhhh
Confidence 8765443
No 345
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=71.17 E-value=96 Score=31.70 Aligned_cols=101 Identities=9% Similarity=0.045 Sum_probs=59.9
Q ss_pred eEEEEecCCC--eEEEEeecC------CcceeEEEEE--ecC----CCEEEEE-eCCCcEEEEECCCCeeEEecccCCCc
Q 011452 258 PLKILSIEDG--TVLKSFNHL------LHRNKKVDFI--EQF----NEKLLVK-QENENLQILDVRNFELTEVSRTEFMT 322 (485)
Q Consensus 258 tIklWdi~tG--~~L~tl~~~------~~~~~~V~f~--~~~----~~~lls~-s~D~tIkIWDv~tg~~~~~l~gh~~~ 322 (485)
.|-+||+.|+ ++++++.-. ......+.+- .+. +...-++ +.+.-|-++|+.+++..+++..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~--- 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT--- 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG---
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC---
Confidence 4667899999 999887631 1123355553 121 2334445 46789999999999998887322
Q ss_pred eEEEEEcCCCcEEEEEeCCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCC----CCEEEEEec
Q 011452 323 PSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSD----QDLIISYCK 385 (485)
Q Consensus 323 v~avaFspdg~llaS~sD~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpD----G~~LaS~s~ 385 (485)
|.|| ... ...+.|+..+ +..+ +..|++||+ +++|-=...
T Consensus 201 -----~~pd-~~~---------~~~i~G~~~~-~~~G--------i~gIaLsp~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 201 -----FKAE-RPT---------KFDYGGKEYE-FKAG--------IFGITLGDRDSEGNRPAYYLAG 243 (381)
T ss_dssp -----GSCC-SCE---------EEEETTEEEE-ECCC--------EEEEEECCCCTTSCCEEEEEES
T ss_pred -----Cccc-cCc---------ceEECCEEeE-eccC--------ceEEEecCCcCCCCeEEEEEEC
Confidence 3454 110 1122333332 2222 899999998 676665443
No 346
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=71.01 E-value=97 Score=31.72 Aligned_cols=122 Identities=14% Similarity=0.216 Sum_probs=82.6
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEeCCcEEEEeCCC--cEEEEeecCCCCCCC
Q 011452 288 QFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG--ELVTSFEDHLLWHPD 365 (485)
Q Consensus 288 ~~~~~lls~s~D~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~sD~TIklWd~~G--~ll~tl~gH~~~~~~ 365 (485)
|....|+... ..++||.|+++.+.++...=. ..|.--.|-.+.. |+=-.+..|--|+++| +.++-|+-|..-. +
T Consensus 76 P~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~-L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~-~ 151 (365)
T 2xzh_A 76 PASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT-VALVTDNAVYHWSMEGESQPVKMFDRHSSLA-G 151 (365)
T ss_dssp SSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE-EEEEESSEEEEEESSTTCCCEEEEECCGGGT-T
T ss_pred CCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCe-EEEEcCCcEEEEcccCCCCCceeeecchhcc-c
Confidence 4333344454 799999999999887764322 2444444544444 3333478899999974 6888898887653 5
Q ss_pred CCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCCC
Q 011452 366 CNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRASN 418 (485)
Q Consensus 366 ~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH~ 418 (485)
|.|-+-..++|+++++-.+-.. +++ .-.|.+.|+.++ .+.-+.|+||.
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~-~~~---~v~G~mQLYS~e-r~~sQ~ieGha 199 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISA-QQN---RVVGAMQLYSVD-RKVSQPIEGHA 199 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEE-ETT---EEEEEEEEEETT-TTEEEEECCSE
T ss_pred ceEEEEEECCCCCEEEEEeEec-cCC---ccceeEEEEeec-ccccceeeeee
Confidence 6788899999999887665421 121 124789999987 45557788886
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=69.91 E-value=10 Score=38.24 Aligned_cols=113 Identities=13% Similarity=0.134 Sum_probs=66.8
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEecccC-CCceEEEE---EcCCCcEEEEE-e-CCcEEEEeCC-CcEEEEeecCCCC
Q 011452 290 NEKLLVKQENENLQILDVRNFELTEVSRTE-FMTPSAFI---FLYENQLFLTF-R-NRTVAVWNFR-GELVTSFEDHLLW 362 (485)
Q Consensus 290 ~~~lls~s~D~tIkIWDv~tg~~~~~l~gh-~~~v~ava---Fspdg~llaS~-s-D~TIklWd~~-G~ll~tl~gH~~~ 362 (485)
++.+++++.|+.|.-.|..+|+.+-.+... ...+.... ...++..++-. . ||.|-.+|.+ |+....+.-....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 357888999999999999999988776543 11221110 01133444432 3 7777777764 6544433321110
Q ss_pred CCCCCeeEEEEC-----------CCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecCC
Q 011452 363 HPDCNTNNIYIT-----------SDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRAS 417 (485)
Q Consensus 363 ~~~~~v~svafS-----------pDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~gH 417 (485)
. ...+.++ .++..+..++. +|++---|+.||+.+.++...
T Consensus 90 ~----~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~-----------~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 90 S----TSPLHLKTNIVVNDSGKIVEDEKVYTGSM-----------RTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp T----TCSEEEECC----------CCEEEEECEE-----------EEEEEEEETTTCCEEEEESTT
T ss_pred e----ccccccCCCceeecccccccCCEEEEEec-----------CCEEEEEECCCCcEEEEEecC
Confidence 0 0001110 13456666776 699999999999999999653
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=69.79 E-value=27 Score=38.24 Aligned_cols=97 Identities=10% Similarity=0.146 Sum_probs=68.6
Q ss_pred EEEEEecCCCEEEEEe-CCCcEEEEECCCC------ee------EEecccCCCceEEEEEcCCCcEEEEEe-CCcEEEEe
Q 011452 282 KVDFIEQFNEKLLVKQ-ENENLQILDVRNF------EL------TEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 347 (485)
Q Consensus 282 ~V~f~~~~~~~lls~s-~D~tIkIWDv~tg------~~------~~~l~gh~~~v~avaFspdg~llaS~s-D~TIklWd 347 (485)
.|.++ |||.++++++ -+.|+-+.|++.- ++ +..-..-.-.+.-.+|.++|....|-- |..|--||
T Consensus 327 Gv~vs-PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 327 GCNTS-SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CEEEC-TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ceeeC-CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 46654 8899998876 8999999999841 11 111111124677889999997777777 99999999
Q ss_pred CC-C----------cEEEEeecCCCCCCCCCeeEEEE------CCCCCEEEEEec
Q 011452 348 FR-G----------ELVTSFEDHLLWHPDCNTNNIYI------TSDQDLIISYCK 385 (485)
Q Consensus 348 ~~-G----------~ll~tl~gH~~~~~~~~v~svaf------SpDG~~LaS~s~ 385 (485)
++ . ..+..+.-|... --+.. .|||++|+|.++
T Consensus 406 i~~a~~~~~g~~~~~v~~k~dv~Yqp------GH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 406 MEEAVRAYKGEKVNYIKQKLDVHYQP------GHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp HHHHHHHHTTCCCCCEEEEEECSSCE------EEEEETTTTSTTCCSCEEEEEES
T ss_pred ccHHHHHhcCccCCeeeeccccccCC------cccccCCCccCCCCccEEEEecc
Confidence 74 3 467777766532 23333 789999999997
No 349
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=69.49 E-value=4.4 Score=45.26 Aligned_cols=32 Identities=6% Similarity=0.068 Sum_probs=28.0
Q ss_pred CCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 374 TSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 374 SpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
..+..+|++=|. |.++||||+.||+|+++..-
T Consensus 228 ~~~~~fLftL~~-----------Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQ-----------NCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEET-----------TCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEEc-----------CCeEEEEEcCCCceEEeecc
Confidence 456789999997 79999999999999998754
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=67.58 E-value=18 Score=39.43 Aligned_cols=71 Identities=14% Similarity=0.182 Sum_probs=44.1
Q ss_pred eeEEEECCCCCEEEEEecCCCCCCCCcC-CCCeEEEEeCCCCeEEEEecCCCCCCCCcccccCCCCCCCCcccccccccc
Q 011452 368 TNNIYITSDQDLIISYCKADSDDPLAEG-NAGSINISNILTGKCLAKIRASNGLPAENECSCSGDYSSGSCNVKKHSHAS 446 (485)
Q Consensus 368 v~svafSpDG~~LaS~s~d~~~d~~~~~-~DgtIklWdl~TGk~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (485)
-++|+|.++|.+.++.....+.+...++ ..+.|-..+..+|+...-+.+...
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~--------------------------- 530 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG--------------------------- 530 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT---------------------------
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC---------------------------
Confidence 5789999999999953210000000000 112455667677887666654321
Q ss_pred ccccchhcccCCeEEEEEcCCCCEEEEec
Q 011452 447 RIRSTVAEALEDITALFYDEDRNEIYTGN 475 (485)
Q Consensus 447 ~~~~~~~~~l~~V~sl~fspDg~~LaSgs 475 (485)
..++.++||||+++|+.+-
T Consensus 531 ----------aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 531 ----------CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp ----------CEEEEEEECTTSSEEEEEE
T ss_pred ----------ccccCCEECCCCCEEEEEE
Confidence 1689999999999998764
No 351
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=67.42 E-value=1.5e+02 Score=32.55 Aligned_cols=249 Identities=13% Similarity=0.079 Sum_probs=131.1
Q ss_pred cEEEEE-EeeCCCEE-EEEEeecCCCCcccceeEEEEeEeccCCcCc-ccceeeecc--ccCc--eEEEEeCCCCeEEEE
Q 011452 138 VIRSLF-YNKNNDSL-ITVSVYASDNFSSLRCRSTRIEYIRRGKPDA-GFALFESES--LKWP--GFVEFDDVNGKVLTY 210 (485)
Q Consensus 138 ~i~sv~-~spdg~~L-as~S~d~~~d~stL~~~t~~lw~i~~G~~~~-~~~lf~~~~--~~~~--~~V~Fs~pnG~~Las 210 (485)
+...+. ++|||+.+ ++.|..|+|- .++++.|+.+|++.. ++. -.... +.++ ..+++-+ +..++.+
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~------~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d-~~~~~~~ 201 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDE------MFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWIN-KDTIIFN 201 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSE------EEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEE-TTEEEEC
T ss_pred EEeceeecCCCCCEEEEEeCCCCCce------eEEEEEECCcCCcCCCCcc-cccccccccccccceeeEEC-CCEEEEE
Confidence 455666 89999875 4556666666 889999999998732 111 00000 0000 1124431 2222222
Q ss_pred ----------eeCCCcEEEeecCCC----eEEEEEcCCcE-EEEEEcC-Cc----eEEEEEcCCC-CeeEEEEecCC--C
Q 011452 211 ----------SAQDSIYKVFDLKNY----TMLYSISDKNV-QEIKISP-GI----MLLIFTKASG-HVPLKILSIED--G 267 (485)
Q Consensus 211 ----------~s~D~tiKlWdl~~g----~~l~tl~~~~V-~~VafSp-g~----~ll~sss~~~-D~tIklWdi~t--G 267 (485)
+..-.+|+.|.+-+. .+++.-....+ ..+..++ ++ .++++.+.+. ...+.+.+..+ |
T Consensus 202 ~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 281 (711)
T 4hvt_A 202 LVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL 281 (711)
T ss_dssp CCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC
T ss_pred eCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC
Confidence 223478999987653 35666654432 2344453 33 2455544232 24556666543 5
Q ss_pred eEEEEeecCCcceeEEEEEecCCCEEEEE--e---------CCCcEEEEECCCCe--------eEEecc-cCCCceEEEE
Q 011452 268 TVLKSFNHLLHRNKKVDFIEQFNEKLLVK--Q---------ENENLQILDVRNFE--------LTEVSR-TEFMTPSAFI 327 (485)
Q Consensus 268 ~~L~tl~~~~~~~~~V~f~~~~~~~lls~--s---------~D~tIkIWDv~tg~--------~~~~l~-gh~~~v~ava 327 (485)
+ +..+.- ..-..+... .++++++. + -.+.|-..|+.++. ....+. .....+..+.
T Consensus 282 ~-~~~l~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 356 (711)
T 4hvt_A 282 K-LQKINM--PSDATLQGS--FKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFIS 356 (711)
T ss_dssp E-EEECCS--CTTCEEEEE--ETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEE
T ss_pred c-ceEeec--CCcceEeee--ECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEE
Confidence 4 333421 222232222 25566662 1 25668888887642 222232 2334677888
Q ss_pred EcCCCcEEEEEe-CC--cEEEEeCC-Cc-EEEE---eecCCCCCCCCCeeEEEECCCCC-EEEEEecCCCCCCCCcCCCC
Q 011452 328 FLYENQLFLTFR-NR--TVAVWNFR-GE-LVTS---FEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNAG 398 (485)
Q Consensus 328 Fspdg~llaS~s-D~--TIklWd~~-G~-ll~t---l~gH~~~~~~~~v~svafSpDG~-~LaS~s~d~~~d~~~~~~Dg 398 (485)
+..+ .++++.. |+ .|.++|+. |+ .++. |.+- +.+..+.++++++ ++++++. ...-.
T Consensus 357 ~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~------~~~~~~~~~~~~~~~~~~~ss--------~~~P~ 421 (711)
T 4hvt_A 357 TTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQ------NAIFGMSSYEEEEEALITIEN--------SIVPP 421 (711)
T ss_dssp ECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCST------TCEEEEECCTTCSCEEEEEEC--------SSSCC
T ss_pred EECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCC------eEEEEEeecCcCCEEEEEEec--------CCCCC
Confidence 8876 6777777 76 46677774 64 2233 2211 2266677778875 5555543 12347
Q ss_pred eEEEEeCCCCeEEEEecC
Q 011452 399 SINISNILTGKCLAKIRA 416 (485)
Q Consensus 399 tIklWdl~TGk~l~tl~g 416 (485)
++-++|+. |+ +..+..
T Consensus 422 ~~~~~d~~-~~-~~~l~~ 437 (711)
T 4hvt_A 422 TIYLWVKT-HE-LKIIRK 437 (711)
T ss_dssp EEEEECTT-SC-EEEEEC
T ss_pred EEEEEeCC-Cc-EEEEec
Confidence 78888876 54 334443
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=62.09 E-value=9.7 Score=42.49 Aligned_cols=36 Identities=11% Similarity=-0.046 Sum_probs=30.3
Q ss_pred eEEEEEecCEEEEEeCCCeEEeeecccCcEEEEeec
Q 011452 98 IIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNV 133 (485)
Q Consensus 98 V~~i~~s~~~ias~s~dgtiklW~~~tG~~l~tl~g 133 (485)
|..+.+...+|++++.|.++|+|++.+|+++.+..-
T Consensus 224 Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444455578999999999999999999999987655
No 353
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=59.93 E-value=41 Score=36.67 Aligned_cols=68 Identities=16% Similarity=0.272 Sum_probs=48.1
Q ss_pred CCCceEEEEEcCCCcEEE-EEeC------------CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEe
Q 011452 319 EFMTPSAFIFLYENQLFL-TFRN------------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 384 (485)
Q Consensus 319 h~~~v~avaFspdg~lla-S~sD------------~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s 384 (485)
.+..+..++|.++|.+.+ |-.. ..|-..+.. |++..-+.+.. .|.++.++||||+++|..+-
T Consensus 474 ~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~----~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI----GCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT----TCEEEEEEECTTSSEEEEEE
T ss_pred ccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC----CccccCCEECCCCCEEEEEE
Confidence 356899999999999988 3211 134455664 88766665432 23489999999999999888
Q ss_pred cCCCCC
Q 011452 385 KADSDD 390 (485)
Q Consensus 385 ~d~~~d 390 (485)
..|.++
T Consensus 550 QHPGe~ 555 (592)
T 4a9v_A 550 QHPGEN 555 (592)
T ss_dssp ESTTTT
T ss_pred eCCCCC
Confidence 755544
No 354
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=59.47 E-value=1.2e+02 Score=28.50 Aligned_cols=217 Identities=7% Similarity=-0.040 Sum_probs=100.7
Q ss_pred CeEEeeecccCcEEE-EeecCCcccEEEEEEeeCCCEEEEEEeecCCC-CcccceeEEEEeEeccCCcCcccceeeeccc
Q 011452 115 GVCAAFCRETNQRIC-FLNVTADEVIRSLFYNKNNDSLITVSVYASDN-FSSLRCRSTRIEYIRRGKPDAGFALFESESL 192 (485)
Q Consensus 115 gtiklW~~~tG~~l~-tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d-~stL~~~t~~lw~i~~G~~~~~~~lf~~~~~ 192 (485)
..+..||..+++-.. .+.. +......-+...+++.++.++.....+ ...-....+..+|+.+++...-.++ .....
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL-PSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEEEECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB-SSCEE
T ss_pred CceEEECCCCCeEecCCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC-Ccchh
Confidence 568889988776322 2211 111222233345778777766421111 0111112355666655543110000 00001
Q ss_pred cCceEEEEeCCCCeEEEEeeCC--------CcEEEeecCCCeE--EEEEcCCc-EEEEEEcCCceEEEEEcCCC---Cee
Q 011452 193 KWPGFVEFDDVNGKVLTYSAQD--------SIYKVFDLKNYTM--LYSISDKN-VQEIKISPGIMLLIFTKASG---HVP 258 (485)
Q Consensus 193 ~~~~~V~Fs~pnG~~Las~s~D--------~tiKlWdl~~g~~--l~tl~~~~-V~~VafSpg~~ll~sss~~~---D~t 258 (485)
.| .++. .++++++.|+.+ ..+-++|+.+.+- +..++... -.+++...+..+++.+..+. -..
T Consensus 91 ~~--~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 166 (315)
T 4asc_A 91 LF--GLGE--ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNK 166 (315)
T ss_dssp SC--EEEE--ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCC
T ss_pred ce--eEEE--ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccce
Confidence 11 2222 268888888843 4578888887752 22222111 11222234444444322111 146
Q ss_pred EEEEecCCCeEEEEeecCCccee-EEEEEecCCCEEEEEeCCC-----cEEEEECCCCeeEEecccCCCceEEEEEcCCC
Q 011452 259 LKILSIEDGTVLKSFNHLLHRNK-KVDFIEQFNEKLLVKQENE-----NLQILDVRNFELTEVSRTEFMTPSAFIFLYEN 332 (485)
Q Consensus 259 IklWdi~tG~~L~tl~~~~~~~~-~V~f~~~~~~~lls~s~D~-----tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg 332 (485)
+.++|+++.+-...-.-...+.. .++. .++..++.|+.++ .+.++|+.+.+-.+...-........+...++
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 244 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVG 244 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECC
Confidence 88889888654321111111111 2222 2344445566443 58899999987655532111111112223477
Q ss_pred cEEEEEe
Q 011452 333 QLFLTFR 339 (485)
Q Consensus 333 ~llaS~s 339 (485)
++++.|+
T Consensus 245 ~l~v~GG 251 (315)
T 4asc_A 245 TLYAIGG 251 (315)
T ss_dssp EEEEEEE
T ss_pred EEEEECC
Confidence 8888776
No 355
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=57.95 E-value=2.1e+02 Score=30.95 Aligned_cols=203 Identities=11% Similarity=0.027 Sum_probs=103.8
Q ss_pred CCCeEEEEeeCC----CcEEEeecCCCeE--EE-E-----EcC--CcEEEEEEcCCceEEEEEcCCCC----eeEEEEec
Q 011452 203 VNGKVLTYSAQD----SIYKVFDLKNYTM--LY-S-----ISD--KNVQEIKISPGIMLLIFTKASGH----VPLKILSI 264 (485)
Q Consensus 203 pnG~~Las~s~D----~tiKlWdl~~g~~--l~-t-----l~~--~~V~~VafSpg~~ll~sss~~~D----~tIklWdi 264 (485)
.++++++.|+.+ ..+-++|+.+.+- +. . +.. ..-..+.++.++.+.+.++.+.. ..+-++|+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 367888888754 4577888877762 22 2 111 12233444424444444332221 35788898
Q ss_pred CCCeEEEEeecCCccee-EEEEEecCCCEEEEEeCCC--cEEEEECCCCeeEEecc-----cCCCceEEEEEcCC-CcEE
Q 011452 265 EDGTVLKSFNHLLHRNK-KVDFIEQFNEKLLVKQENE--NLQILDVRNFELTEVSR-----TEFMTPSAFIFLYE-NQLF 335 (485)
Q Consensus 265 ~tG~~L~tl~~~~~~~~-~V~f~~~~~~~lls~s~D~--tIkIWDv~tg~~~~~l~-----gh~~~v~avaFspd-g~ll 335 (485)
.+.+-...-.-...+.. .++.. .++..++.|+.++ .+.+||+.+.+-..... ..-....++++..+ ++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~-~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSL-PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEEC-TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEE-cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 88654322111111111 22221 2455556676433 79999999987655431 11112234555555 7888
Q ss_pred EEEe-C-------CcEEEEeCC-CcE-----EEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEE
Q 011452 336 LTFR-N-------RTVAVWNFR-GEL-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSIN 401 (485)
Q Consensus 336 aS~s-D-------~TIklWd~~-G~l-----l~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIk 401 (485)
+-|+ + ..+.+||+. .+- ...+.... ..+... .+++...|+++++.|+.+.... ...-..|.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p-~~~R~~-~~~~~~~~~~iyv~GG~~~~~~---~~~~~~v~ 629 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP-LFQRYG-SQIKYITPRKLLIVGGTSPSGL---FDRTNSII 629 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG-GGCCBS-CEEEEEETTEEEEECCBCSSCC---CCTTTSEE
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC-CCCccc-ceEEEeCCCEEEEECCccCCCC---CCCCCeEE
Confidence 8776 2 357888985 441 23332211 011111 1333344478888887521000 01236799
Q ss_pred EEeCCCCeEE
Q 011452 402 ISNILTGKCL 411 (485)
Q Consensus 402 lWdl~TGk~l 411 (485)
++|+.+.+-.
T Consensus 630 ~yd~~t~~W~ 639 (695)
T 2zwa_A 630 SLDPLSETLT 639 (695)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCeEE
Confidence 9999988754
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=57.56 E-value=50 Score=35.79 Aligned_cols=67 Identities=15% Similarity=0.282 Sum_probs=48.9
Q ss_pred CCceEEEEEcCCCcEEEEEe-C------------CcEEEEeCC-CcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 320 FMTPSAFIFLYENQLFLTFR-N------------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 320 ~~~v~avaFspdg~llaS~s-D------------~TIklWd~~-G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
...+--++|+|+|.|++.-- + ..+-+-+.. |++.+-+.++. +|.+..++|||||++|...-.
T Consensus 475 f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~----gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI----GCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT----TCEEEEEEECTTSSEEEEEEE
T ss_pred ccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC----CccCcCeeECCCCCEEEEEEE
Confidence 44678899999999887643 2 123333454 88888888764 366999999999999998877
Q ss_pred CCCCC
Q 011452 386 ADSDD 390 (485)
Q Consensus 386 d~~~d 390 (485)
-|.|+
T Consensus 551 HPGe~ 555 (592)
T 3zwu_A 551 HPGEN 555 (592)
T ss_dssp STTTT
T ss_pred CCCCC
Confidence 55443
No 357
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=54.80 E-value=79 Score=27.29 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=59.6
Q ss_pred CCCcEEEEECCCCeeEEecccCC-CceEEEEEcC----CCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCeeE
Q 011452 298 ENENLQILDVRNFELTEVSRTEF-MTPSAFIFLY----ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 370 (485)
Q Consensus 298 ~D~tIkIWDv~tg~~~~~l~gh~-~~v~avaFsp----dg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~s 370 (485)
.+++.+|-+..+|+|+.+..+.. ....-+.+.. ..+..+... ++..+|-+.. |+|+..-.+.... . ..-
T Consensus 25 ~~g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~--G--~~v 100 (165)
T 3pg0_A 25 GDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSD--G--ANV 100 (165)
T ss_dssp -CCEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCST--T--CBE
T ss_pred CCCEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCCCccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCC--C--CEE
Confidence 67888888888888888764321 1111222322 223334444 8888888885 8887654322110 0 011
Q ss_pred EEE----CCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 371 IYI----TSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 371 vaf----SpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
+.. ++++++.+.... +|+.+|-+..+|+||..-.+
T Consensus 101 ~~~~c~~~~~Q~W~~~~~g-----------~g~~~i~~~~sg~cLdv~~~ 139 (165)
T 3pg0_A 101 IQYSYSGGDNQQWRLVDLG-----------DGYYKLVARHSGKALDVENA 139 (165)
T ss_dssp EEECCCCCGGGCEEEEECS-----------SSCEEEEETTTCCEEEEGGG
T ss_pred EEEcCCCCCccEEEEEECC-----------CCEEEEEECCCCcEEEcCCC
Confidence 111 234566666432 58888999999999976543
No 358
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=52.45 E-value=2.7e+02 Score=30.56 Aligned_cols=229 Identities=14% Similarity=0.094 Sum_probs=106.6
Q ss_pred CCCeEEeeecccCcEEEE-eecCCcc------cEEEEEEeeCCCEEEEEEeecCCCCcc-cceeEEEEeEeccCCc-Ccc
Q 011452 113 QSGVCAAFCRETNQRICF-LNVTADE------VIRSLFYNKNNDSLITVSVYASDNFSS-LRCRSTRIEYIRRGKP-DAG 183 (485)
Q Consensus 113 ~dgtiklW~~~tG~~l~t-l~g~~~~------~i~sv~~spdg~~Las~S~d~~~d~st-L~~~t~~lw~i~~G~~-~~~ 183 (485)
.-.+++.+|++|++.+-. +...... ....++|- |++.+..++.++...++. ---+++++|. .|.. .+.
T Consensus 154 d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~Gt~~~~~ 230 (711)
T 4hvt_A 154 DEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLYPNSLYIWK--RGESIEKA 230 (711)
T ss_dssp SEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSSBCEEEEEE--TTSCGGGC
T ss_pred ceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCCCCEEEEEE--CCCChHHC
Confidence 445899999999997641 1100000 00223665 455554433333222110 0125555555 6765 344
Q ss_pred cceeeeccccCceEEEEeCCCCe-----EEEEeeCC---CcEEEeecCC--CeEEEEEc-CCcEEEEEEcCCceEEEEEc
Q 011452 184 FALFESESLKWPGFVEFDDVNGK-----VLTYSAQD---SIYKVFDLKN--YTMLYSIS-DKNVQEIKISPGIMLLIFTK 252 (485)
Q Consensus 184 ~~lf~~~~~~~~~~V~Fs~pnG~-----~Las~s~D---~tiKlWdl~~--g~~l~tl~-~~~V~~VafSpg~~ll~sss 252 (485)
..+|+.+.-..--.+..+ .+++ .+++.+.| ..+.+-|+.. ++ +..+. ... ..+..++++.+++...
T Consensus 231 ~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~-~~~~~~~~~~~~~~~~ 307 (711)
T 4hvt_A 231 KKLFEVPKEYIYVSAGKL-LSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSD-ATLQGSFKEYVFWLLR 307 (711)
T ss_dssp EEEEECCTTSCEEEEEES-SCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTT-CEEEEEETTEEEEECS
T ss_pred eEEeccCCCceEEEEEEe-cCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCc-ceEeeeECCEEEEEEC
Confidence 567876322211123343 3554 45554422 3444555543 44 23332 111 1233345666666432
Q ss_pred CC--------CCeeEEEEecCCCe-------EEEE-eecCC-cceeEEEEEecCCCEEEEE-eCCC--cEEEEECCCCe-
Q 011452 253 AS--------GHVPLKILSIEDGT-------VLKS-FNHLL-HRNKKVDFIEQFNEKLLVK-QENE--NLQILDVRNFE- 311 (485)
Q Consensus 253 ~~--------~D~tIklWdi~tG~-------~L~t-l~~~~-~~~~~V~f~~~~~~~lls~-s~D~--tIkIWDv~tg~- 311 (485)
.+ .-+.|-..|+.++. ..++ +.... ..+..+.+. ++.|++. ..|+ .|.++|+.+|+
T Consensus 308 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~l~~~~~~~~~~~l~~~~~~~g~~ 384 (711)
T 4hvt_A 308 SDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT---KDRVFLATYDNVVAKVVTFTLENEQW 384 (711)
T ss_dssp SCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC---SSCEEEEEEETTEEEEEEECEETTEE
T ss_pred cccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEE---CCEEEEEEEECCEEEEEEEECCCCce
Confidence 22 11346666665531 1222 32211 122344443 3455554 4565 46778887775
Q ss_pred -eEE-e-cccCCCceEEEEEcCCCc-EEEEEe----CCcEEEEeCCCc
Q 011452 312 -LTE-V-SRTEFMTPSAFIFLYENQ-LFLTFR----NRTVAVWNFRGE 351 (485)
Q Consensus 312 -~~~-~-l~gh~~~v~avaFspdg~-llaS~s----D~TIklWd~~G~ 351 (485)
... + +.+ ...+..+.+++++. ++++.+ -.++-.+|+.|+
T Consensus 385 ~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~ 431 (711)
T 4hvt_A 385 TKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKTHE 431 (711)
T ss_dssp CCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTTSC
T ss_pred EEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCCCc
Confidence 222 1 221 24566666777765 555544 246777776644
No 359
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=48.68 E-value=2.7e+02 Score=33.95 Aligned_cols=138 Identities=12% Similarity=0.120 Sum_probs=87.1
Q ss_pred CCcEEEeecCCCeEEE--EEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCCC
Q 011452 214 DSIYKVFDLKNYTMLY--SISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNE 291 (485)
Q Consensus 214 D~tiKlWdl~~g~~l~--tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~~ 291 (485)
..+|-|-|+.++.... .+.. -+.-.+|...+++- .. ..++.|+|+++-+.++++.-...-+++ .|+. +.
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A---dsAIMnP~~~iiAL-ra--g~~lQiFnl~~k~klks~~~~e~VvfW-kWis--~~ 117 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA---DSAIMNPASKVIAL-KA--GKTLQIFNIEMKSKMKAHTMTDDVTFW-KWIS--LN 117 (1630)
T ss_pred CceEEEEECCCCCCcccccccc---hhhccCCCcceEEE-ec--CCeEEEeehHHhhhhcccccCCCceEE-EecC--CC
Confidence 4477788888766431 1221 12334575554443 22 269999999998889887743332222 1121 23
Q ss_pred EEEEEeCCCcEEEEECCC-CeeEEecccC----CCceEEEEEcCCCcEEEE-------Ee-CCcEEEEeCCCcEEEEeec
Q 011452 292 KLLVKQENENLQILDVRN-FELTEVSRTE----FMTPSAFIFLYENQLFLT-------FR-NRTVAVWNFRGELVTSFED 358 (485)
Q Consensus 292 ~lls~s~D~tIkIWDv~t-g~~~~~l~gh----~~~v~avaFspdg~llaS-------~s-D~TIklWd~~G~ll~tl~g 358 (485)
+|+.- .+..|--|++.. ..+.+.+.-| ...|-...-+++++.++- ++ .|.+.|+.++.+.-+.++|
T Consensus 118 ~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ieg 196 (1630)
T 1xi4_A 118 TVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (1630)
T ss_pred eeEEE-cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhH
Confidence 33332 467889999973 4555555444 346667777888888773 23 5799999998888888999
Q ss_pred CCC
Q 011452 359 HLL 361 (485)
Q Consensus 359 H~~ 361 (485)
|..
T Consensus 197 ha~ 199 (1630)
T 1xi4_A 197 HAA 199 (1630)
T ss_pred hHh
Confidence 975
No 360
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=45.63 E-value=2.9e+02 Score=29.78 Aligned_cols=180 Identities=11% Similarity=0.068 Sum_probs=84.9
Q ss_pred CCeEEEEeeCCC------cEEEeecCCCeEE--EEEcCC-cEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEee
Q 011452 204 NGKVLTYSAQDS------IYKVFDLKNYTML--YSISDK-NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (485)
Q Consensus 204 nG~~Las~s~D~------tiKlWdl~~g~~l--~tl~~~-~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~ 274 (485)
+|++++.|+.++ .+-++|+.+.+-. ..+... .-.+.+.-.++.+.+.++.+....+.++|+++++-...-.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 789999987543 4677887775522 122211 1112233224444444343333378999998876433211
Q ss_pred ---cCCcce--eEEEEEecCCCEEEEEeC--C-----CcEEEEECCCCe------eEEecc----cCCCceEEEEEcCCC
Q 011452 275 ---HLLHRN--KKVDFIEQFNEKLLVKQE--N-----ENLQILDVRNFE------LTEVSR----TEFMTPSAFIFLYEN 332 (485)
Q Consensus 275 ---~~~~~~--~~V~f~~~~~~~lls~s~--D-----~tIkIWDv~tg~------~~~~l~----gh~~~v~avaFspdg 332 (485)
-...+. ..+.+....+..++.|+. + ..+.+||+.+.+ ...... +.. ... ++...++
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~-~~~-~~~~~~~ 608 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRY-GSQ-IKYITPR 608 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCB-SCE-EEEEETT
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcc-cce-EEEeCCC
Confidence 000111 124433211334455654 3 468899999887 222211 111 112 2233448
Q ss_pred cEEEEEe-C--------CcEEEEeCCCcEEEEeecCCCC----CCCCCeeEEEECCCCCEEEEEec
Q 011452 333 QLFLTFR-N--------RTVAVWNFRGELVTSFEDHLLW----HPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 333 ~llaS~s-D--------~TIklWd~~G~ll~tl~gH~~~----~~~~~v~svafSpDG~~LaS~s~ 385 (485)
++++-|+ + ..|.++|.....-..+.-.... .|...=.+.+..++|++++.|+.
T Consensus 609 ~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 609 KLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred EEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 8888876 4 3588899863333222210000 00000023444567788888763
No 361
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=44.53 E-value=2.7e+02 Score=28.31 Aligned_cols=159 Identities=12% Similarity=0.104 Sum_probs=87.9
Q ss_pred EEEeecCCC--eEEEEEc--------CCcEEEEEEc---C-----CceEEEEEcCCCCeeEEEEecCCCeEEEEeecCC-
Q 011452 217 YKVFDLKNY--TMLYSIS--------DKNVQEIKIS---P-----GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL- 277 (485)
Q Consensus 217 iKlWdl~~g--~~l~tl~--------~~~V~~VafS---p-----g~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~- 277 (485)
+-+|||++. ++++++. +.....|++. | ++...++.+ ...-|-+.|+++|+--+.+..+.
T Consensus 125 Lv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~--~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 125 IVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF--LRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET--TTTEEEEEETTTTEEEEEECGGGS
T ss_pred EEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC--CCCcEEEEECCCCcEEEEccCCCc
Confidence 446777777 7665542 2357888887 3 345455543 44789999999998877653111
Q ss_pred -----------------cceeEEEEEecC----CCEEEEEeCCCcEEEEECCC--------CeeEEecccCC---CceEE
Q 011452 278 -----------------HRNKKVDFIEQF----NEKLLVKQENENLQILDVRN--------FELTEVSRTEF---MTPSA 325 (485)
Q Consensus 278 -----------------~~~~~V~f~~~~----~~~lls~s~D~tIkIWDv~t--------g~~~~~l~gh~---~~v~a 325 (485)
..+..++.+ |+ +..|--..-- .-+++-+.| ...++.+ |.. ..-.+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLs-p~~~~~~~~LYf~pls-s~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~ 279 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLG-DRDSEGNRPAYYLAGS-AIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIA 279 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEEC-CCCTTSCCEEEEEESS-CSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEE
T ss_pred cccCcceEECCEEeEeccCceEEEec-CCcCCCCeEEEEEECC-CCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcce
Confidence 122333333 21 1222221110 012222221 1112222 222 22334
Q ss_pred EEEc-CCCcEEEEEe-CCcEEEEeCCC-cE----EEEe-ec-CCCCCCCCCeeEEEECCCCCEEEEEec
Q 011452 326 FIFL-YENQLFLTFR-NRTVAVWNFRG-EL----VTSF-ED-HLLWHPDCNTNNIYITSDQDLIISYCK 385 (485)
Q Consensus 326 vaFs-pdg~llaS~s-D~TIklWd~~G-~l----l~tl-~g-H~~~~~~~~v~svafSpDG~~LaS~s~ 385 (485)
.++. .+|.++.+-- ...|..||.++ ++ +.++ .+ ...| ..++.+.+||.+-+..+.
T Consensus 280 ~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~-----pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 280 LAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVF-----GTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCS-----EEEEEECTTSCEEEEECS
T ss_pred EEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccc-----cCeEEECCCCeEEEEECc
Confidence 5664 6899888887 89999999987 32 2222 22 3346 788999999988887653
No 362
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=41.61 E-value=2.2e+02 Score=26.52 Aligned_cols=133 Identities=10% Similarity=0.071 Sum_probs=65.1
Q ss_pred CCeEEEEeeCC-------CcEEEeecCCCeEE--EEEcCCcE-EEEEEcCCceEEEEEcCCC----CeeEEEEecCCCeE
Q 011452 204 NGKVLTYSAQD-------SIYKVFDLKNYTML--YSISDKNV-QEIKISPGIMLLIFTKASG----HVPLKILSIEDGTV 269 (485)
Q Consensus 204 nG~~Las~s~D-------~tiKlWdl~~g~~l--~tl~~~~V-~~VafSpg~~ll~sss~~~----D~tIklWdi~tG~~ 269 (485)
++++.+.|+.+ ..+-++|+.+.+-. ..++...- .+++...+ .+.+.+..+. -..+-++|+++.+-
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNG-MIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETT-EEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECC-EEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 68888888764 34677788776622 22221110 11222334 4444432211 14588899988764
Q ss_pred EEEeecCCccee-EEEEEecCCCEEEEEeCC-----CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe
Q 011452 270 LKSFNHLLHRNK-KVDFIEQFNEKLLVKQEN-----ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR 339 (485)
Q Consensus 270 L~tl~~~~~~~~-~V~f~~~~~~~lls~s~D-----~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s 339 (485)
...-.-...+.. .++. .++..++.|+.+ ..+.++|+.+.+-.+.-.-........+...++++++-|+
T Consensus 188 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 261 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGG 261 (318)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred EECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECC
Confidence 332111111111 2222 234444556532 4577899998876554211111111122344778888776
No 363
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=41.55 E-value=2.3e+02 Score=26.75 Aligned_cols=53 Identities=8% Similarity=0.021 Sum_probs=26.1
Q ss_pred cEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-CC------cEEEEeCC-CcEE
Q 011452 301 NLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-NR------TVAVWNFR-GELV 353 (485)
Q Consensus 301 tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D~------TIklWd~~-G~ll 353 (485)
.+.++|+.+.+-.+.-.-........++..++++++-|+ +. .|-+.+++ ++.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 578999998765443211111111223446888888887 53 23334775 5543
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=36.16 E-value=3.2e+02 Score=26.82 Aligned_cols=123 Identities=13% Similarity=0.127 Sum_probs=68.8
Q ss_pred cccccceEEEEEe-----cCEEEEEeCCCeEEeeeccc-------CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecC
Q 011452 92 LRKRSKIIEIVAA-----RDIVFALAQSGVCAAFCRET-------NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYAS 159 (485)
Q Consensus 92 ~~~~s~V~~i~~s-----~~~ias~s~dgtiklW~~~t-------G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~ 159 (485)
|.....|..+..- .++++.++.+|.+|--.+.. |.....|.. .+ .+-.++.....+.|+.++..|
T Consensus 91 l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D-~lv~~~~~~~~d~ill~T~~G- 167 (327)
T 3uc1_A 91 FQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-ND-ELVGAVLCSAGDDLLLVSANG- 167 (327)
T ss_dssp CCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TC-CEEEEEEECTTCEEEEEETTS-
T ss_pred CCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CC-EEEEEEEecCCCEEEEEECCC-
Confidence 4567778887654 57999999999999876442 332223433 34 455566555566666666322
Q ss_pred CCCcccceeEE--EEe--Eec-cCCcCcccceeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCCe
Q 011452 160 DNFSSLRCRST--RIE--YIR-RGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT 226 (485)
Q Consensus 160 ~d~stL~~~t~--~lw--~i~-~G~~~~~~~lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g~ 226 (485)
+.+ ++. +|+ .|+...|.++.....-..+-++..- +++..|+..+..|.+|.-.+..+.
T Consensus 168 --------~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~-~~~~~ll~~T~~G~~Krt~l~e~~ 230 (327)
T 3uc1_A 168 --------QSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVV-REGTYLLVATSGGYAKRTAIEEYP 230 (327)
T ss_dssp --------EEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEEC-CTTCEEEEEETTSEEEEEEGGGSC
T ss_pred --------eEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEE-CCCCEEEEEeCCCcEEEEEHHHcc
Confidence 343 334 443 3333344443332111122233222 245567778888988888876543
No 365
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=35.37 E-value=2.8e+02 Score=25.83 Aligned_cols=189 Identities=10% Similarity=0.048 Sum_probs=92.2
Q ss_pred eEEEEeeCCCcEEEeecCCCeEEE-EEcC---CcEEEEEEcCCceEEEEEcCC--CC-------eeEEEEecCCCeEEEE
Q 011452 206 KVLTYSAQDSIYKVFDLKNYTMLY-SISD---KNVQEIKISPGIMLLIFTKAS--GH-------VPLKILSIEDGTVLKS 272 (485)
Q Consensus 206 ~~Las~s~D~tiKlWdl~~g~~l~-tl~~---~~V~~VafSpg~~ll~sss~~--~D-------~tIklWdi~tG~~L~t 272 (485)
.+++.|+. .+..+|..+.+-.. .+.. ..-.+++...+..+++. ... .+ ..+-++|..+++-..
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~G-G~~~~~~~~~~~~~~~~~~~d~~~~~W~~- 92 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVG-GLYVDEENKDQPLQSYFFQLDNVSSEWVG- 92 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEE-SSCC-------CCCBEEEEEETTTTEEEE-
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEEC-CcccCccccCCCccccEEEEeCCCCcEEE-
Confidence 45555553 37788888777322 2321 12233333344444443 311 11 126778888876543
Q ss_pred eec-CCccee-EEEEEecCCCEEEEEeCC-------CcEEEEECCCCeeEEecccCCCceEEEEEcCCCcEEEEEe-C--
Q 011452 273 FNH-LLHRNK-KVDFIEQFNEKLLVKQEN-------ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-N-- 340 (485)
Q Consensus 273 l~~-~~~~~~-~V~f~~~~~~~lls~s~D-------~tIkIWDv~tg~~~~~l~gh~~~v~avaFspdg~llaS~s-D-- 340 (485)
+.. ...+.. .++. .++...+.|+.+ ..+.++|+.+.+-.+...-........+...++++++-|+ +
T Consensus 93 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 93 LPPLPSARCLFGLGE--VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDD 170 (318)
T ss_dssp CSCBSSCBCSCEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESS
T ss_pred CCCCCccccccceEE--ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCC
Confidence 221 111111 2322 234445556643 3588899998876554211111111112236888888776 2
Q ss_pred ----CcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeE
Q 011452 341 ----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKC 410 (485)
Q Consensus 341 ----~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~ 410 (485)
..+.++|.....-..+.. ...+......++ -++++++.|+.+.. +.-..+.++|+.+.+-
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAP--MKTPRSMFGVAI--HKGKIVIAGGVTED------GLSASVEAFDLKTNKW 234 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECC--CSSCCBSCEEEE--ETTEEEEEEEEETT------EEEEEEEEEETTTCCE
T ss_pred CCccceEEEEcCCCCEEEECCC--CCCCcccceEEE--ECCEEEEEcCcCCC------CccceEEEEECCCCeE
Confidence 258888986433333321 111111112222 37788888775200 0114677899887764
No 366
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=33.75 E-value=2e+02 Score=30.04 Aligned_cols=105 Identities=11% Similarity=0.052 Sum_probs=65.3
Q ss_pred eCCCcEEEEECCCCeeEEecccCC-CceEEEEEcC----CCcEEEEEe-CCcEEEEeCC-CcEEEEeecCCCCCCCCCee
Q 011452 297 QENENLQILDVRNFELTEVSRTEF-MTPSAFIFLY----ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTN 369 (485)
Q Consensus 297 s~D~tIkIWDv~tg~~~~~l~gh~-~~v~avaFsp----dg~llaS~s-D~TIklWd~~-G~ll~tl~gH~~~~~~~~v~ 369 (485)
..+++.+|-+..+|+|+.+..+-. ....-..+.. +.+..+... ++..+|=+.. |+||-.-.+.... + ..
T Consensus 358 ~~~~~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~---G-~~ 433 (526)
T 3vsf_A 358 PDTTRYKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNGSLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKED---G-GV 433 (526)
T ss_dssp SCCCCEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCST---T-EE
T ss_pred CCCccEEEEECCCCceEEecCCCCCCCcEEEEccCCCCcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCC---C-CE
Confidence 367899999999999999875432 1222223332 234444444 8888888885 8888654332111 0 11
Q ss_pred EEEE----CCCCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 370 NIYI----TSDQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 370 svaf----SpDG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
-+.+ ++++++.+.... +|..+|-+..+|+||..-.+
T Consensus 434 v~~~~c~g~~nQ~W~~~~~g-----------~g~y~i~~~~sg~cLdv~~~ 473 (526)
T 3vsf_A 434 LIQYTSNGGYNQHWKFTDIG-----------DGYYKISSRHCGKLIDVRKW 473 (526)
T ss_dssp EEEECCCCCGGGCEEEEEEE-----------TTEEEEEESSSCCEEEEGGG
T ss_pred EEEecCCCCcccEEEEEECC-----------CCeEEEEECCCCCEEEeCCC
Confidence 1111 256677776543 68999999999999976443
No 367
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=33.47 E-value=2.3e+02 Score=26.70 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=52.3
Q ss_pred EEEeecCCCeEE--EEEc------CCcEEEEEEc-CCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEe
Q 011452 217 YKVFDLKNYTML--YSIS------DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIE 287 (485)
Q Consensus 217 iKlWdl~~g~~l--~tl~------~~~V~~VafS-pg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~ 287 (485)
+.||.+..+.=+ |++- +..+|.+.+. |+ ++|++=+..+|+||..... .+ +....
T Consensus 71 lt~Wa~~~~nw~wgY~~~ds~~FG~~r~W~i~~~~p~------------G~VqFvN~~TgtCL~ay~n---Gv--v~~~C 133 (206)
T 1sr4_A 71 LTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHR------------EYFRFVNQSLGTCVEAYGN---GL--IHDIC 133 (206)
T ss_dssp EEECSCSTTCBEEEEEGGGCGGGGGGGCEEEEECSST------------TCEEEEETTTCCEEEEETT---EE--EEECC
T ss_pred EEEEecCCCcceeeecccccCCcCCcceeEEEeecCC------------CEEEEEECCCCceeeeccC---Ce--EEecC
Confidence 368999877633 4442 2457776644 33 4677778889999998652 12 22211
Q ss_pred cCC---C-EEEEEeCCCcEEEEECCCCeeEEec
Q 011452 288 QFN---E-KLLVKQENENLQILDVRNFELTEVS 316 (485)
Q Consensus 288 ~~~---~-~lls~s~D~tIkIWDv~tg~~~~~l 316 (485)
..+ + .-+.-...+.++|=++.+++|+.+.
T Consensus 134 ~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~ 166 (206)
T 1sr4_A 134 SLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYN 166 (206)
T ss_dssp CTTCGGGCEEEEEBTTSCEEEEETTTCCEEEEC
T ss_pred CCCCcccEEEEecCCCccEEEEECCCCccCCcc
Confidence 111 1 1223346889999999999999975
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=29.36 E-value=4e+02 Score=25.78 Aligned_cols=21 Identities=10% Similarity=0.066 Sum_probs=16.0
Q ss_pred CceEEEEEcC--CCcEEEEEeCC
Q 011452 321 MTPSAFIFLY--ENQLFLTFRNR 341 (485)
Q Consensus 321 ~~v~avaFsp--dg~llaS~sD~ 341 (485)
..|.++++.| ++.++|.+..+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC-
T ss_pred CceEEEEECCCCCCeEEEEecCC
Confidence 4799999998 78888776654
No 369
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=28.30 E-value=2.4e+02 Score=22.93 Aligned_cols=45 Identities=11% Similarity=0.262 Sum_probs=28.6
Q ss_pred EEEEEcCCCcEEEEEeCCcEEEEeCCCcEEEEeecCCCCCCCCCeeEEEECCCCCEEE
Q 011452 324 SAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (485)
Q Consensus 324 ~avaFspdg~llaS~sD~TIklWd~~G~ll~tl~gH~~~~~~~~v~svafSpDG~~La 381 (485)
..+.+..||++++...++.+ ||... ...... -..+.+.+||.+++
T Consensus 53 ~~l~l~~dGNLVl~~~~~~~-~W~S~-------t~~~~g-----~~~l~l~~dGnlvl 97 (110)
T 3a0c_A 53 CRLTLHNNGNLVIYDQSNRV-IWQTK-------TNGKED-----HYVLVLQQDRNVVI 97 (110)
T ss_dssp CEEEECTTSCEEEECTTCCE-EEECC-------CCCSSS-----CCEEEECTTSCEEE
T ss_pred EEEEEeCCCCEEEECCCCcE-EEecC-------CCCCCC-----CEEEEEeCCccEEE
Confidence 34678899999887655554 78743 221111 24677888888666
No 370
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=24.64 E-value=6.5e+02 Score=26.69 Aligned_cols=139 Identities=10% Similarity=0.086 Sum_probs=89.4
Q ss_pred CCCcEEEeecCCCeEE--EEEcCCcEEEEEEcCCceEEEEEcCCCCeeEEEEecCCCeEEEEeecCCcceeEEEEEecCC
Q 011452 213 QDSIYKVFDLKNYTML--YSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFN 290 (485)
Q Consensus 213 ~D~tiKlWdl~~g~~l--~tl~~~~V~~VafSpg~~ll~sss~~~D~tIklWdi~tG~~L~tl~~~~~~~~~V~f~~~~~ 290 (485)
.+.+|-|-|++++... +.+..+ +.-.+|...+++--. . .++.|+|+++-+.|+++.-..+-+++=- +. +
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~Ad---sAIMnP~~~iiALra-g--~~lQiFnle~K~klks~~~~e~VvfWkW-is--~ 116 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-G--KTLQIFNIEMKSKMKAHTMTDDVTFWKW-IS--L 116 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCS---EEEECSSSSCEEEEE-T--TEEEEEETTTTEEEEEEECSSCCCEEEE-EE--T
T ss_pred CCCeEEEEECCCCCcceecccccc---eeeeCCCCcEEEEec-C--CeEEEEchHHhhhhcceecCCCceEEEe-cC--C
Confidence 3457888899876632 333322 233457444433322 2 6999999999999999875444333221 21 2
Q ss_pred CEEEEEeCCCcEEEEECCC-CeeEEecccC----CCceEEEEEcCCCcEEEEE-------e-CCcEEEEeCCCcEEEEee
Q 011452 291 EKLLVKQENENLQILDVRN-FELTEVSRTE----FMTPSAFIFLYENQLFLTF-------R-NRTVAVWNFRGELVTSFE 357 (485)
Q Consensus 291 ~~lls~s~D~tIkIWDv~t-g~~~~~l~gh----~~~v~avaFspdg~llaS~-------s-D~TIklWd~~G~ll~tl~ 357 (485)
..|+.- -+..|--|++.. ..+.+.+.-| ...|-...-++|++.++-. . .|.+.|+.++.+.-+.++
T Consensus 117 ~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ie 195 (494)
T 1bpo_A 117 NTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (494)
T ss_dssp TEEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEEC
T ss_pred CeEEEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchhe
Confidence 344332 456788899873 4566665444 3467777789999987732 2 468889999988889999
Q ss_pred cCCC
Q 011452 358 DHLL 361 (485)
Q Consensus 358 gH~~ 361 (485)
||..
T Consensus 196 Ghaa 199 (494)
T 1bpo_A 196 GHAA 199 (494)
T ss_dssp CSEE
T ss_pred eeee
Confidence 9974
No 371
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.16 E-value=2.7e+02 Score=22.80 Aligned_cols=52 Identities=13% Similarity=-0.036 Sum_probs=29.3
Q ss_pred eCCCcEEEEECCCCeeEEecccCC-CceEEEEEcCCCcEEEEEeCCcEEEEeCC
Q 011452 297 QENENLQILDVRNFELTEVSRTEF-MTPSAFIFLYENQLFLTFRNRTVAVWNFR 349 (485)
Q Consensus 297 s~D~tIkIWDv~tg~~~~~l~gh~-~~v~avaFspdg~llaS~sD~TIklWd~~ 349 (485)
+.|+.+.|++...+..+-....+. .....+.|..+|.+++...++++ +|...
T Consensus 31 q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~ 83 (113)
T 3mez_B 31 RDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVSN 83 (113)
T ss_dssp CTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEECS
T ss_pred cCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEECC
Confidence 356666666543233333222211 12235678999999987666655 78864
No 372
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=23.28 E-value=5.1e+02 Score=24.98 Aligned_cols=191 Identities=14% Similarity=0.159 Sum_probs=94.5
Q ss_pred ecCEEEEEeCCCeEEeeeccc-------CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEec
Q 011452 104 ARDIVFALAQSGVCAAFCRET-------NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIR 176 (485)
Q Consensus 104 s~~~ias~s~dgtiklW~~~t-------G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~ 176 (485)
..++++..+++|.+|--.... |+-+..++-..++.+..++.....+.|+..+..| .+..++..+++
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G-------~~~~~~~~~ip 79 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEG-------KLYLINAYEIK 79 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTS-------EEEEEEGGGSC
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCC-------eEEEEEHHHCC
Confidence 367899999999999765432 1122222222334566777766667776666433 22344444553
Q ss_pred cCCc-Ccccc---eee---eccccCceEE-EEeCCCCeEEEEeeCCCcEEEeecCCCe-------EEEEEc-CCcEEEEE
Q 011452 177 RGKP-DAGFA---LFE---SESLKWPGFV-EFDDVNGKVLTYSAQDSIYKVFDLKNYT-------MLYSIS-DKNVQEIK 240 (485)
Q Consensus 177 ~G~~-~~~~~---lf~---~~~~~~~~~V-~Fs~pnG~~Las~s~D~tiKlWdl~~g~-------~l~tl~-~~~V~~Va 240 (485)
.+.. ..|.+ ++. .+.+.....+ +|+ +.+.|...+..|.+|--.+..+. ....+. ++.+-.+.
T Consensus 80 ~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~--~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~ 157 (312)
T 1suu_A 80 DSSRASKGQNISELINLGDQEEILTIKNSKDLT--DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAE 157 (312)
T ss_dssp C-------CBGGGTSCCCTTCCEEEEEEESCCC--TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEE
T ss_pred CCCccCCCcChhhccCCCCCCEEEEEEEeccCC--CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEE
Confidence 3321 11222 111 1221111011 222 35667778889999999885432 223333 34555555
Q ss_pred Ec-CCceEEEEEcCCCCeeEEEEecC---------CCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECC
Q 011452 241 IS-PGIMLLIFTKASGHVPLKILSIE---------DGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR 308 (485)
Q Consensus 241 fS-pg~~ll~sss~~~D~tIklWdi~---------tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~ 308 (485)
.. ++..++..++. +.+....+. .|..+..|.. ...+-.+... .+++.+++-++.+..+..++.
T Consensus 158 ~~~~~~~i~l~T~~---G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v-~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 158 IVFKDEKVICLSKK---GSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSV-KENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EECTTCEEEEEETT---SEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEEC-TTCSEEEEEETTSEEEEEEGG
T ss_pred EeCCCCEEEEEeCC---CcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEE-CCCCeEEEEECCCceEEEEHH
Confidence 44 44444444332 344444432 1223333332 1233344333 235567777888888888764
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=23.06 E-value=5.4e+02 Score=25.17 Aligned_cols=195 Identities=11% Similarity=0.189 Sum_probs=97.9
Q ss_pred cCEEEEEeCCCeEEeeeccc-------CcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEecc
Q 011452 105 RDIVFALAQSGVCAAFCRET-------NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRR 177 (485)
Q Consensus 105 ~~~ias~s~dgtiklW~~~t-------G~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~ 177 (485)
.++++..+++|.||--...+ |+-+..+....++.+..++.....+.|...+..| ++..+++++++.
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~G-------r~y~~~~~~lp~ 75 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQG-------RVYRAKAYDLPE 75 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTS-------EEEEEEGGGSCB
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCC-------eEEEEEHHHCcC
Confidence 46899999999999654221 2222333333455677777766677666555322 345666778776
Q ss_pred CCc-Ccccce---eeeccccCceE-EEEeC-CCCeEEEEeeCCCcEEEeecCCCeE-------EEEEc-CCcEEEEEEc-
Q 011452 178 GKP-DAGFAL---FESESLKWPGF-VEFDD-VNGKVLTYSAQDSIYKVFDLKNYTM-------LYSIS-DKNVQEIKIS- 242 (485)
Q Consensus 178 G~~-~~~~~l---f~~~~~~~~~~-V~Fs~-pnG~~Las~s~D~tiKlWdl~~g~~-------l~tl~-~~~V~~VafS- 242 (485)
+.. ..|.++ +..+.-..+-+ +...+ ++..+++..+.+|.||--.+..+.. ...+. ++.+..+...
T Consensus 76 ~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~ 155 (327)
T 3uc1_A 76 ASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCS 155 (327)
T ss_dssp CCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEEC
T ss_pred CCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEec
Confidence 643 233331 21111111112 23321 2577889999999999998765432 22333 3455554444
Q ss_pred CCceEEEEEcCCCCeeEEEE--ecC------CCeEEEEeecCCcceeEEEEEecCCCEEEEEeCCCcEEEEECC
Q 011452 243 PGIMLLIFTKASGHVPLKIL--SIE------DGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR 308 (485)
Q Consensus 243 pg~~ll~sss~~~D~tIklW--di~------tG~~L~tl~~~~~~~~~V~f~~~~~~~lls~s~D~tIkIWDv~ 308 (485)
....++..++...-..+++. ++. .|..+..|.. ...+-.+... +.++.++..+..|.+|.-.+.
T Consensus 156 ~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~-~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 156 AGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVV-REGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEEC-CTTCEEEEEETTSEEEEEEGG
T ss_pred CCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCC-CCEEEEEEEE-CCCCEEEEEeCCCcEEEEEHH
Confidence 33344444333211122223 222 2222222221 1223333333 234577888888888877654
No 374
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=23.02 E-value=1.4e+02 Score=28.19 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=55.5
Q ss_pred CEEEEEeCCCcEEEEECCCCeeEEeccc------CCCceEEEEEcCCCcEEEEEeCCcEEEEeCC-CcEEEEeecCCCCC
Q 011452 291 EKLLVKQENENLQILDVRNFELTEVSRT------EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWH 363 (485)
Q Consensus 291 ~~lls~s~D~tIkIWDv~tg~~~~~l~g------h~~~v~avaFspdg~llaS~sD~TIklWd~~-G~ll~tl~gH~~~~ 363 (485)
-.-+.+..+..|.||.+.-+.-+--..- ....+|.+.+ +..+|+|++=|.. |.|+....+-. -|
T Consensus 60 ~~sim~~ng~~lt~Wa~~~~nw~wgY~~~ds~~FG~~r~W~i~~--------~~p~G~VqFvN~~TgtCL~ay~nGv-v~ 130 (206)
T 1sr4_A 60 FMTLMGQNGALLTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEP--------GKHREYFRFVNQSLGTCVEAYGNGL-IH 130 (206)
T ss_dssp CBEEEETTSEEEEECSCSTTCBEEEEEGGGCGGGGGGGCEEEEE--------CSSTTCEEEEETTTCCEEEEETTEE-EE
T ss_pred cEEEEcCCCCEEEEEecCCCcceeeecccccCCcCCcceeEEEe--------ecCCCEEEEEECCCCceeeeccCCe-EE
Confidence 3445566888899999976553222100 0123343321 1338899999995 99998854310 11
Q ss_pred CCCCeeEEEECC-CCCEEEEEecCCCCCCCCcCCCCeEEEEeCCCCeEEEEecC
Q 011452 364 PDCNTNNIYITS-DQDLIISYCKADSDDPLAEGNAGSINISNILTGKCLAKIRA 416 (485)
Q Consensus 364 ~~~~v~svafSp-DG~~LaS~s~d~~~d~~~~~~DgtIklWdl~TGk~l~tl~g 416 (485)
.-|.- +. .+.+=+.-. ..|+|.|=++.+|+||.+...
T Consensus 131 ~~C~~-----s~~~Q~wsiiPt-----------tnGAVQIKnvatg~CL~t~~~ 168 (206)
T 1sr4_A 131 DICSL-----DKLAQEFELLPT-----------DSGAVVIKSVSQGRCVTYNPV 168 (206)
T ss_dssp ECCCT-----TCGGGCEEEEEB-----------TTSCEEEEETTTCCEEEECSS
T ss_pred ecCCC-----CCcccEEEEecC-----------CCccEEEEECCCCccCCccCC
Confidence 11110 00 111111111 258888889999999998643
No 375
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=21.88 E-value=4.3e+02 Score=24.92 Aligned_cols=110 Identities=12% Similarity=0.079 Sum_probs=53.1
Q ss_pred CEEEEEeCCCeEEeeecccCcEEEEeecCCcccEEEEEEeeCCCEEEEEEeecCCCCcccceeEEEEeEeccCCcCcccc
Q 011452 106 DIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFA 185 (485)
Q Consensus 106 ~~ias~s~dgtiklW~~~tG~~l~tl~g~~~~~i~sv~~spdg~~Las~S~d~~~d~stL~~~t~~lw~i~~G~~~~~~~ 185 (485)
++++..+++|.||-=... +..+..++...++.+..++.....+.|+..+..| ++..+++.+++.++. .|.+
T Consensus 3 ~v~v~lT~~G~iKr~~~~-~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~G-------r~~~~~~~elp~~r~-~G~~ 73 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGH-DIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTG-------RSYAIDPITLPSARG-QGEP 73 (256)
T ss_dssp EEEEEEETTSEEEEEESS-CCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTS-------EEEEECGGGSCCSSS-CCEE
T ss_pred CEEEEEeCCCEEEEeeCC-cCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCC-------eEEEEEHHHCCCcCC-CCeE
Confidence 567788999999865432 2111112222334555666555555555544322 123444455544421 2221
Q ss_pred ---eeeeccccCceEEEEeCCCCeEEEEeeCCCcEEEeecCCC
Q 011452 186 ---LFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY 225 (485)
Q Consensus 186 ---lf~~~~~~~~~~V~Fs~pnG~~Las~s~D~tiKlWdl~~g 225 (485)
++....-..+-.+ +...+++.|...+..|.+|...+..+
T Consensus 74 i~~~i~L~~~e~Iv~~-~~~~~~~~lll~T~~G~~Kr~~~~e~ 115 (256)
T 1zvt_A 74 LTGKLTLPPGATVDHM-LMESDDQKLLMASDAGYGFVCTFNDL 115 (256)
T ss_dssp GGGTCCCCTTCCEEEE-ECCCTTCEEEEEBTTSEEEEEEGGGG
T ss_pred eeeeecCCCCCEEEEE-EEeCCCCEEEEEeCCCeEEEeEHHHh
Confidence 1111101112233 21124556677788888888887543
No 376
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=21.15 E-value=5.6e+02 Score=24.66 Aligned_cols=152 Identities=8% Similarity=0.023 Sum_probs=71.0
Q ss_pred EcCCcEEEEEEcC--CceEEEEEcCCCCeeEEEEecC-CCeEEEEeec--------------CCcceeEEEEEecC-CCE
Q 011452 231 ISDKNVQEIKISP--GIMLLIFTKASGHVPLKILSIE-DGTVLKSFNH--------------LLHRNKKVDFIEQF-NEK 292 (485)
Q Consensus 231 l~~~~V~~VafSp--g~~ll~sss~~~D~tIklWdi~-tG~~L~tl~~--------------~~~~~~~V~f~~~~-~~~ 292 (485)
+.+..|.+|++.| .+.+.+..... ..--.||-.. .|+.-..+.. ....+..|++.+.+ ++.
T Consensus 52 ~~~~~v~~i~~dp~~~~~l~~g~~~g-~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ 130 (394)
T 3b7f_A 52 FLGHTIHHIVQDPREPERMLMAARTG-HLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGT 130 (394)
T ss_dssp STTSEEEEEEECSSSTTCEEEEEEC---CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTC
T ss_pred CCCCceEEEEECCCCCCeEEEEecCC-CCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCE
Confidence 3456799999997 55554443221 0001233322 3332222211 11246677776444 677
Q ss_pred EEEEeCCCcEEEEECCCCee-EEe--ccc----------------CCCceEEEEEcC--CCcEEEEEeCCcEEEEeCCCc
Q 011452 293 LLVKQENENLQILDVRNFEL-TEV--SRT----------------EFMTPSAFIFLY--ENQLFLTFRNRTVAVWNFRGE 351 (485)
Q Consensus 293 lls~s~D~tIkIWDv~tg~~-~~~--l~g----------------h~~~v~avaFsp--dg~llaS~sD~TIklWd~~G~ 351 (485)
+.++.+++.|-..+=. |+. ... +.. ....+.++++.| .+.+++...++.|-.-+-.|+
T Consensus 131 l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~ 209 (394)
T 3b7f_A 131 WYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGT 209 (394)
T ss_dssp EEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTS
T ss_pred EEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCC
Confidence 7777665554444322 222 111 110 123578899987 355665555543333222355
Q ss_pred EEEEeecCC--CCCC------CCCeeEEEECCC-CCEEEEEe
Q 011452 352 LVTSFEDHL--LWHP------DCNTNNIYITSD-QDLIISYC 384 (485)
Q Consensus 352 ll~tl~gH~--~~~~------~~~v~svafSpD-G~~LaS~s 384 (485)
--+.+.... .+.+ ...+..|++.|+ ...|..++
T Consensus 210 tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 210 DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 433332100 0000 012789999996 34444444
Done!