BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011453
(485 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SGQ0|VOZ1_ARATH Transcription factor VOZ1 OS=Arabidopsis thaliana GN=VOZ1 PE=1 SV=1
Length = 486
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/496 (71%), Positives = 401/496 (80%), Gaps = 23/496 (4%)
Query: 1 MVGKGAKTNCKSASHKLFKDKAKTRVDDLQGKFLDLQFARKESRTVDVSLLEEQVHQMLR 60
M GK +KTNC+SASHKLFKDKAK RVDDLQG LDLQFARKESR DV+LLEEQV+QMLR
Sbjct: 1 MTGKRSKTNCRSASHKLFKDKAKNRVDDLQGMLLDLQFARKESRPTDVTLLEEQVNQMLR 60
Query: 61 EWKAELHEPSPASSLQQDGSLG-FSSDIYRLLQLCEEEDDATSTLTAPKPEPNDQVLPVA 119
EWK+EL+EPSPASSLQQ G+LG FSSDI RLLQLC+EEDDATS L APKPEP DQ L
Sbjct: 61 EWKSELNEPSPASSLQQGGTLGSFSSDICRLLQLCDEEDDATSKLAAPKPEPADQNLEAG 120
Query: 120 DTAVYHEGYGVNQGEQQHSFPLVDQCKNSSSGVHSTAINNLEGSTLLDYHH-FDLHQEFE 178
AV+ GY + QG+ +H PLVD CK+ S A NN +G+ L+YH +DL QEFE
Sbjct: 121 KAAVFQRGYNLVQGKSEHGLPLVDNCKDLSL----AAGNNFDGTAPLEYHQQYDLQQEFE 176
Query: 179 QNFYAGYN-VSNFCGEDAMQQISGYLPGICPPPSAFLGPKCALWDCPRPAQGVDWYQDYC 237
NF G+N ++ + IS ++P ICPPPSAFLGPKCALWDCPRPAQG DW+QDYC
Sbjct: 177 PNFNGGFNNCPSYGVVEGPIHISNFIPTICPPPSAFLGPKCALWDCPRPAQGFDWFQDYC 236
Query: 238 SGFHAALAFSEGPPGMGPVLRPGGIGLKDGLLFAALSARAQGKDVGIPECEGAATAKSPW 297
S FHAALAF+EGPPGM PV+RPGGIGLKDGLLFAALSA+A GKDVGIPECEGAATAKSPW
Sbjct: 237 SSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPECEGAATAKSPW 296
Query: 298 NAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGG 357
NAPELFDL+VLE ET+REWLFFDKPRRAFESGNRKQRSLPDY+GRGWHESRKQ+M EFGG
Sbjct: 297 NAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQIMVEFGG 356
Query: 358 LKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKSAKGKLANDSVADLQK 417
LKRSYYMDPQPL+HFEWHLYEYEINKCDACALYRLELKLVDGKK++KGK++NDSVADLQK
Sbjct: 357 LKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKTSKGKVSNDSVADLQK 416
Query: 418 QMGRLTAEFPSD---------NKRLVKGRAKVNAKAGVGGNIYPASNVVASTNEKFDYGP 468
QMGRLTAEFP + NKR +KGR KV+ K G NV + + DYG
Sbjct: 417 QMGRLTAEFPPENNTTNTTNNNKRCIKGRPKVSTKVATG-------NVQNTVEQANDYGV 469
Query: 469 TGQFDYLIENLSEYYL 484
+F+YL+ NLS+YY+
Sbjct: 470 GEEFNYLVGNLSDYYI 485
>sp|Q9SLB9|VOZ2_ARATH Transcription factor VOZ2 OS=Arabidopsis thaliana GN=VOZ2 PE=1 SV=2
Length = 450
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/427 (52%), Positives = 272/427 (63%), Gaps = 38/427 (8%)
Query: 25 RVDDLQGKFLDLQFARKESRTVDVSLLEEQVHQMLREWKAELHEPSPASSLQQDGSLGFS 84
++ +LQ +F LQ ARKE R D++LLE Q+ Q +REW+AEL PSP SSL +G F
Sbjct: 17 KLRELQERFCHLQAARKEGRHGDLALLEAQISQNIREWQAELTAPSPESSLLGEGISQFL 76
Query: 85 SDIYRLLQLCEEEDDATSTL-----TAPKPEPNDQVL-PVADTAVYHEGYGVN------- 131
+ LL+L +EEDDATSTL P PE Q L P T+ N
Sbjct: 77 EEFAPLLKL-DEEDDATSTLKEHAGAKPDPEGFSQSLCPPEWTSENFSQSPFNGNFSCGF 135
Query: 132 ---------QGEQQH-SFPLVDQCKNSSSGVHSTAIN-NLEGSTLLDYHHFDLHQEFEQN 180
G+Q H + D NS+ H ++ NL+ ++ DY ++ QE +
Sbjct: 136 EDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQKLSSNLDITSQYDYIFSEVRQELDN- 194
Query: 181 FYAGYNVSNFCGEDAMQQISGYLPGICP-----PPSAFLGPKCALWDCPRPAQGVDWYQD 235
S D+ ++I + P PPSAFLGPKCALWDC RPAQG +WY D
Sbjct: 195 -------SPSTKLDSSEEIDNFAEFSTPSSVRVPPSAFLGPKCALWDCTRPAQGSEWYLD 247
Query: 236 YCSGFHAALAFSEGPPGMGPVLRPGGIGLKDGLLFAALSARAQGKDVGIPECEGAATAKS 295
YCS +H LA +E PG PVLRPGGI LKD LL AL A+ QGK+VGIP CEGA K
Sbjct: 248 YCSNYHGTLALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTQGKNVGIPVCEGAVNTKC 307
Query: 296 PWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEF 355
PWNA ELF L ++EGETIREWLFFDKPRRA++SGNRKQRSLPDYSGRGWHESRKQ+M E
Sbjct: 308 PWNAAELFHLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHESRKQLMKEQ 367
Query: 356 GGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKSAKGKLANDSVADL 415
G KRSYYMDPQP FEWHL+EY+IN+ DACALYRLELK+ +GKKS KGK++ D +ADL
Sbjct: 368 EGQKRSYYMDPQPPGPFEWHLFEYQINESDACALYRLELKVGNGKKSPKGKISKDPLADL 427
Query: 416 QKQMGRL 422
QK+MG+
Sbjct: 428 QKKMGQF 434
>sp|O74362|ESF2_SCHPO Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=esf2 PE=1 SV=1
Length = 334
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 353 NEFGGLKRSYYMDP----QPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKSAKGKLA 408
N+ GG K S+Y D + L F+WH +I +A RL++++ G+K K +
Sbjct: 198 NQIGGKKSSWYHDDIWNMKYLPKFKWHHLTEQIAAENAARESRLKVEIEQGRKQLKQYMR 257
Query: 409 NDSVADL-----QKQMGR----LTAEFPSDNKRL 433
N A + +K+ R ++ EFP + K L
Sbjct: 258 NVENAKMIEGIRKKRSERDTLNVSTEFPEETKDL 291
>sp|Q5F499|OPA1_CHICK Dynamin-like 120 kDa protein, mitochondrial OS=Gallus gallus
GN=OPA1 PE=2 SV=1
Length = 977
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 344 WHES-----RKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVD 398
WH+ K +N +R +Y +++ H + E+ D +R++ L
Sbjct: 854 WHQIYRRYFLKTALNHCNLCRRGFY-------YYQRHFVDSELECNDIVLFWRIQRMLAI 906
Query: 399 GKKSAKGKLANDSVADLQKQMGRLTAEFPSDNKRLVK 435
+ + +L N V L+K + + +F DN++ VK
Sbjct: 907 TANTLRQQLTNTEVRRLEKNVKEVLEDFAEDNEKKVK 943
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,621,579
Number of Sequences: 539616
Number of extensions: 9106203
Number of successful extensions: 21376
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 21365
Number of HSP's gapped (non-prelim): 13
length of query: 485
length of database: 191,569,459
effective HSP length: 121
effective length of query: 364
effective length of database: 126,275,923
effective search space: 45964435972
effective search space used: 45964435972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)