BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011455
(485 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A0JUU8|TRUB_ARTS2 tRNA pseudouridine synthase B OS=Arthrobacter sp. (strain FB24)
GN=truB PE=3 SV=1
Length = 306
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 102/160 (63%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+V+KP+GWTS V G++RRL +KVGHAGTLDPMATG+L++ + KAT+L+ G
Sbjct: 5 LVIVDKPQGWTSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVLGINKATRLLTYIVGTS 64
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y+ RLGE+T T DA+ V+ + + IR A A+ GEI QVP SAIKV
Sbjct: 65 KTYTATIRLGESTVTDDAEGEVVSSHSAAAVTEGAIRAAVAALTGEIQQVPSSVSAIKVN 124
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDIERSLEDRFFFFL 470
GE+ Y + R GE ++L+ R ++I +FD+ +R L
Sbjct: 125 GERAYARVRSGEDVKLAARPVTIHRFDVHAVRPERAGAVL 164
>sp|A1R520|TRUB_ARTAT tRNA pseudouridine synthase B OS=Arthrobacter aurescens (strain
TC1) GN=truB PE=3 SV=1
Length = 311
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 97/149 (65%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+V+KP+GWTS V G++RRL +KVGHAGTLDPMATG+L++ + KAT+L+ G
Sbjct: 5 LVIVDKPQGWTSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVLGINKATRLLTYIVGTS 64
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y+ RLGE T T DA+ V + HI D+ + A+ G I QVP SAIKV
Sbjct: 65 KTYTATIRLGETTITDDAEGEVTEARTAAHITDDAVAVGVAALTGPIQQVPSSVSAIKVN 124
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDIE 459
GE+ Y + R GE ++L+ R ++I +FD+
Sbjct: 125 GERSYARVRSGEEVKLAARPVTIHRFDVH 153
>sp|Q1BA81|TRUB_MYCSS tRNA pseudouridine synthase B OS=Mycobacterium sp. (strain MCS)
GN=truB PE=3 SV=1
Length = 297
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 95/144 (65%)
Query: 315 NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYS 374
+KP G TS V G+ RR+ +KVGHAGTLDPMATG+L+V + +ATKL+ K Y
Sbjct: 14 DKPAGMTSHDVVGRCRRIFGTRKVGHAGTLDPMATGVLVVGIDRATKLLGLLTATDKSYE 73
Query: 375 GVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEKM 434
RLG+ T+T DA+ V++ P I DE I A A+ RGEI QVP SAIKVGG++
Sbjct: 74 ATIRLGQTTTTEDAEGDVVETTPATGITDEQIGHAVAALRGEIDQVPSAVSAIKVGGQRA 133
Query: 435 YDKARRGESIELSPRRISIFQFDI 458
Y AR G+++EL+ RR+ I +F++
Sbjct: 134 YKLAREGQTVELAARRVRIDRFEV 157
>sp|A1UET1|TRUB_MYCSK tRNA pseudouridine synthase B OS=Mycobacterium sp. (strain KMS)
GN=truB PE=3 SV=1
Length = 297
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 95/144 (65%)
Query: 315 NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYS 374
+KP G TS V G+ RR+ +KVGHAGTLDPMATG+L+V + +ATKL+ K Y
Sbjct: 14 DKPAGMTSHDVVGRCRRIFGTRKVGHAGTLDPMATGVLVVGIDRATKLLGLLTATDKSYE 73
Query: 375 GVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEKM 434
RLG+ T+T DA+ V++ P I DE I A A+ RGEI QVP SAIKVGG++
Sbjct: 74 ATIRLGQTTTTEDAEGDVVETTPATGITDEQIGHAVAALRGEIDQVPSAVSAIKVGGQRA 133
Query: 435 YDKARRGESIELSPRRISIFQFDI 458
Y AR G+++EL+ RR+ I +F++
Sbjct: 134 YKLAREGQTVELAARRVRIDRFEV 157
>sp|A3PY88|TRUB_MYCSJ tRNA pseudouridine synthase B OS=Mycobacterium sp. (strain JLS)
GN=truB PE=3 SV=1
Length = 297
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 95/144 (65%)
Query: 315 NKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYS 374
+KP G TS V G+ RR+ +KVGHAGTLDPMATG+L+V + +ATKL+ K Y
Sbjct: 14 DKPAGMTSHDVVGRCRRIFGTRKVGHAGTLDPMATGVLVVGIDRATKLLGLLTATDKSYE 73
Query: 375 GVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEKM 434
RLG+ T+T DA+ V++ P I DE I A A+ RGEI QVP SAIKVGG++
Sbjct: 74 ATIRLGQTTTTEDAEGDVVETTPATGITDEQIGHAVAALRGEIDQVPSAVSAIKVGGQRA 133
Query: 435 YDKARRGESIELSPRRISIFQFDI 458
Y AR G+++EL+ RR+ I +F++
Sbjct: 134 YKLAREGQTVELAARRVRIDRFEV 157
>sp|Q47RU8|TRUB_THEFY tRNA pseudouridine synthase B OS=Thermobifida fusca (strain YX)
GN=truB PE=3 SV=1
Length = 293
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 99/148 (66%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+V+KP GWTS V ++RRL ++VGHAGTLDPMATG+L+V VGKAT+L+
Sbjct: 5 VVIVDKPAGWTSHDVVARVRRLAGTRRVGHAGTLDPMATGVLVVGVGKATRLLGYLALTE 64
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y RLG++T+T DA+ +++R P +HI + + + G I QVPP SA+KV
Sbjct: 65 KVYEATIRLGQSTTTDDAEGELLERRPADHIDEAAVHAGTRALTGVIHQVPPQVSAVKVR 124
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G++ Y +AR GE++EL R +++ +F +
Sbjct: 125 GQRAYRRARAGETVELKAREVTVHEFTV 152
>sp|Q9RB36|TRUB_FLAJ1 tRNA pseudouridine synthase B OS=Flavobacterium johnsoniae (strain
ATCC 17061 / DSM 2064 / UW101) GN=truB PE=3 SV=1
Length = 229
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 101/159 (63%), Gaps = 7/159 (4%)
Query: 309 GTMVLVNKPKGWTSFTVCGKLRRLVKVK-------KVGHAGTLDPMATGLLIVCVGKATK 361
G ++L++KP W+SF KL+ L+ K K+GHAGTLDP+ATGLL++C GK TK
Sbjct: 9 GQVLLIDKPLKWSSFQAVNKLKYLLINKVGLPKKFKIGHAGTLDPLATGLLLICTGKFTK 68
Query: 362 LVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVP 421
+ QG K Y+G F +G T ++D ++ + Q P EHI + I + F GEI Q P
Sbjct: 69 KISELQGQAKEYTGTFYIGATTPSYDLETEIDQTFPTEHINEVLIHETVKQFLGEIDQKP 128
Query: 422 PMFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDIER 460
P+FSAIK G ++Y+ AR GESIE+ R+ +I +F+I R
Sbjct: 129 PIFSAIKKDGVRLYEHARAGESIEIESRKTTIHEFEITR 167
>sp|B1MD72|TRUB_MYCA9 tRNA pseudouridine synthase B OS=Mycobacterium abscessus (strain
ATCC 19977 / DSM 44196) GN=truB PE=3 SV=1
Length = 298
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 96/148 (64%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+V+KP G TS V + RR+ +KVGHAGTLDPMATG+L++ + +ATK++
Sbjct: 10 LVIVDKPAGMTSHDVVSRCRRIFSTRKVGHAGTLDPMATGVLVIGIERATKIMGLLTLTT 69
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y+ R G++TST DA+ V+Q H+ + DI A A RG+I QVP SAIKV
Sbjct: 70 KSYAATIRFGQSTSTDDAEGEVLQTISASHLTEVDIEAAVAGLRGDIAQVPSSVSAIKVD 129
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G++ Y AR G+S+EL+ R + I +FD+
Sbjct: 130 GQRAYKLAREGQSVELAARPVRISRFDV 157
>sp|Q650L8|TRUB_BACFR tRNA pseudouridine synthase B OS=Bacteroides fragilis (strain
YCH46) GN=truB PE=3 SV=1
Length = 233
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 98/156 (62%), Gaps = 6/156 (3%)
Query: 309 GTMVLVNKPKGWTSFTVCGKLR----RLVKVKK--VGHAGTLDPMATGLLIVCVGKATKL 362
G ++ NKP GWTSF V G R R +KVKK VGHAGTLDP+ATG++IVC GKATK
Sbjct: 6 GEVLYFNKPLGWTSFKVVGHARYHMCRRMKVKKLKVGHAGTLDPLATGVMIVCTGKATKR 65
Query: 363 VDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPP 422
++ +Q K Y +LG T ++D + + P EHI E + K +F GEI Q+PP
Sbjct: 66 IEEFQYHTKEYVATIQLGATTPSYDLEHEIDATYPTEHITRELVEKTLKTFVGEIQQIPP 125
Query: 423 MFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDI 458
FSA KV G + YD AR+G+ +EL P+ + I + ++
Sbjct: 126 AFSACKVDGARAYDLARKGQEVELKPKLLVIDEIEL 161
>sp|Q5LJ29|TRUB_BACFN tRNA pseudouridine synthase B OS=Bacteroides fragilis (strain ATCC
25285 / NCTC 9343) GN=truB PE=3 SV=1
Length = 233
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 98/156 (62%), Gaps = 6/156 (3%)
Query: 309 GTMVLVNKPKGWTSFTVCGKLR----RLVKVKK--VGHAGTLDPMATGLLIVCVGKATKL 362
G ++ NKP GWTSF V G R R +KVKK VGHAGTLDP+ATG++IVC GKATK
Sbjct: 6 GEVLYFNKPLGWTSFKVVGHARYHMCRRMKVKKLKVGHAGTLDPLATGVMIVCTGKATKR 65
Query: 363 VDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPP 422
++ +Q K Y +LG T ++D + + P EHI E + K +F GEI Q+PP
Sbjct: 66 IEEFQYHTKEYVATIQLGATTPSYDLEHEIDATYPTEHITRELVEKTLKTFVGEIQQIPP 125
Query: 423 MFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDI 458
FSA KV G + YD AR+G+ +EL P+ + I + ++
Sbjct: 126 AFSACKVDGARAYDLARKGQEVELKPKLLVIDEIEL 161
>sp|P62190|TRUB_MYCTU tRNA pseudouridine synthase B OS=Mycobacterium tuberculosis GN=truB
PE=1 SV=1
Length = 298
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 96/148 (64%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+++KP G TS V G+ RR+ ++VGHAGTLDPMATG+L++ + +ATK++
Sbjct: 8 IVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAP 67
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y+ RLG+ TST DA+ V+Q P +H+ E I A RGEI QVP SAIKVG
Sbjct: 68 KSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVG 127
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G + Y AR+G S++L R I I +F++
Sbjct: 128 GRRAYRLARQGRSVQLEARPIRIDRFEL 155
>sp|A5U6E6|TRUB_MYCTA tRNA pseudouridine synthase B OS=Mycobacterium tuberculosis (strain
ATCC 25177 / H37Ra) GN=truB PE=3 SV=1
Length = 298
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 96/148 (64%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+++KP G TS V G+ RR+ ++VGHAGTLDPMATG+L++ + +ATK++
Sbjct: 8 IVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAP 67
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y+ RLG+ TST DA+ V+Q P +H+ E I A RGEI QVP SAIKVG
Sbjct: 68 KSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVG 127
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G + Y AR+G S++L R I I +F++
Sbjct: 128 GRRAYRLARQGRSVQLEARPIRIDRFEL 155
>sp|A1KMD6|TRUB_MYCBP tRNA pseudouridine synthase B OS=Mycobacterium bovis (strain BCG /
Pasteur 1173P2) GN=truB PE=3 SV=1
Length = 298
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 96/148 (64%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+++KP G TS V G+ RR+ ++VGHAGTLDPMATG+L++ + +ATK++
Sbjct: 8 IVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAP 67
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y+ RLG+ TST DA+ V+Q P +H+ E I A RGEI QVP SAIKVG
Sbjct: 68 KSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVG 127
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G + Y AR+G S++L R I I +F++
Sbjct: 128 GRRAYRLARQGRSVQLEARPIRIDRFEL 155
>sp|P62189|TRUB_MYCBO tRNA pseudouridine synthase B OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=truB PE=3 SV=1
Length = 298
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 96/148 (64%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+++KP G TS V G+ RR+ ++VGHAGTLDPMATG+L++ + +ATK++
Sbjct: 8 IVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAP 67
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y+ RLG+ TST DA+ V+Q P +H+ E I A RGEI QVP SAIKVG
Sbjct: 68 KSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVG 127
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G + Y AR+G S++L R I I +F++
Sbjct: 128 GRRAYRLARQGRSVQLEARPIRIDRFEL 155
>sp|Q5L0I5|TRUB_GEOKA tRNA pseudouridine synthase B OS=Geobacillus kaustophilus (strain
HTA426) GN=truB PE=3 SV=1
Length = 285
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 102/160 (63%), Gaps = 4/160 (2%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
++L+NKPKG TS K+RRL+ VKK GH GTLDP +G+L +C+GKAT++ + G
Sbjct: 4 VLLLNKPKGMTSHDCVAKVRRLLGVKKAGHTGTLDPNVSGVLPICLGKATRIAEFLTGTT 63
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEH-IKDEDIRKAAASFRGEIWQVPPMFSAIKV 429
K Y G LG AT+T DAD +I P + I +I S GEI Q PPM+SA+KV
Sbjct: 64 KTYEGKVTLGAATTTEDADGDIIAARPVDRPIARAEIEAVFDSLTGEIEQTPPMYSAVKV 123
Query: 430 GGEKMYDKARRGESIELSPRRISIFQFDIERSLEDRFFFF 469
GG+K+Y+ AR G +E RR++I++ ++ L++R FF
Sbjct: 124 GGKKLYEYARAGIEVERPTRRVTIYELEL---LDEREQFF 160
>sp|A2C4C0|TRUB_PROM1 tRNA pseudouridine synthase B OS=Prochlorococcus marinus (strain
NATL1A) GN=truB PE=3 SV=1
Length = 314
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Query: 307 PFGTMVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRY 366
PFG V+++KP G TS +LR++ ++K+GH+GTLDP TG+L + +G AT+L+
Sbjct: 4 PFG-FVVIDKPSGLTSHDCVNRLRKVFGIRKIGHSGTLDPAVTGVLPIAIGDATRLISYL 62
Query: 367 QGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSA 426
QG K Y+G+ +LG T+T D +I+ + W I DI +FRGEI Q PP+FS+
Sbjct: 63 QGS-KAYTGIIQLGATTNTDDMQGEIIESKAWPLITQNDINYLLENFRGEILQKPPIFSS 121
Query: 427 IKVGGEKMYDKARRGESIELSPRRISIFQFDI 458
+ + GE+ Y KAR+GE +L P++++I + ++
Sbjct: 122 VHIKGERAYKKARKGEKFDLIPKKVTINKLNL 153
>sp|B1ZX46|TRUB_OPITP tRNA pseudouridine synthase B OS=Opitutus terrae (strain DSM 11246
/ PB90-1) GN=truB PE=3 SV=1
Length = 241
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 97/160 (60%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
++LV+KP TS V +LRR + +K++GHAGTLDPMATGL+I+ +GKAT + +
Sbjct: 11 VLLVDKPTAHTSHDVVARLRRKLNMKRIGHAGTLDPMATGLMILLIGKATTISQYLTSLD 70
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y G LG+ T + DAD V+ P + +IR A A F G+ +Q PPM+SAIKV
Sbjct: 71 KEYEGTIELGKVTDSQDADGEVLSTLPVPPFTEAEIRAAMAGFMGDQYQTPPMYSAIKVD 130
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDIERSLEDRFFFFL 470
G +Y AR+G +E PR I + F++ R +F F L
Sbjct: 131 GVPLYKTARKGGEVEREPRFIRVSSFELTRFALPQFDFRL 170
>sp|Q04ED7|TRUB_OENOB tRNA pseudouridine synthase B OS=Oenococcus oeni (strain ATCC
BAA-331 / PSU-1) GN=truB PE=3 SV=1
Length = 298
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Query: 308 FGTMVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQ 367
+ +VLV+KP G TSF V KLR++ + K+VGH GTLDP TGLL++ +GKATKL+D Q
Sbjct: 2 YNGIVLVDKPAGLTSFDVVAKLRKIFQQKQVGHTGTLDPSVTGLLVIVLGKATKLIDYLQ 61
Query: 368 GMIKGYSGVFRLGEATSTWDADSPVIQREPW-EHIKDEDIRKAAASFRGEIWQVPPMFSA 426
K Y G LG T T D D V + + E I D + A SF G Q+PPM+SA
Sbjct: 62 ENQKQYRGTLILGLKTDTQDMDGQVTEMQFLKEAIADFKKKAAFDSFLGSSDQLPPMYSA 121
Query: 427 IKVGGEKMYDKARRGESIELSPRRISIFQF 456
+KVGG+ +Y+ AR+GE+IE R+I + +F
Sbjct: 122 VKVGGKHLYELARKGETIERKSRKIKVMEF 151
>sp|A0QIX1|TRUB_MYCA1 tRNA pseudouridine synthase B OS=Mycobacterium avium (strain 104)
GN=truB PE=3 SV=1
Length = 309
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 94/148 (63%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+V+KP G TS V G+ RR+ ++VGHAGTLDPMATG+L++ V +ATK++
Sbjct: 6 LVVVDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVLGVERATKILGLLTAAA 65
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K YS RLG+ATST DA+ V++ H+ + I A RG+I QVP SAIKV
Sbjct: 66 KSYSATIRLGQATSTDDAEGDVVRSVDARHLTSQAIEAAVGGLRGDIHQVPSTVSAIKVA 125
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G++ Y R G+++EL R + I +F++
Sbjct: 126 GKRAYKLVREGQAVELPARPVRIDRFEV 153
>sp|A5N845|TRUB_CLOK5 tRNA pseudouridine synthase B OS=Clostridium kluyveri (strain ATCC
8527 / DSM 555 / NCIMB 10680) GN=truB PE=3 SV=1
Length = 289
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
+NKP+G TSF V K+R ++K +KVGH GTLDPMA+G+L +CVG+ATK D K Y
Sbjct: 7 INKPEGMTSFDVVRKVRFMLKNEKVGHTGTLDPMASGVLPICVGRATKFADYMVESKKIY 66
Query: 374 SGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEK 433
RLG T T+D + V+ ++K +DI + SF+GEI QVPPM+SA+KV G +
Sbjct: 67 LAELRLGITTETYDREGSVVNTRGV-YLKKKDIIEEILSFQGEIEQVPPMYSALKVNGRR 125
Query: 434 MYDKARRGESIELSPRRISIFQFDI 458
+Y+ AR+G IE R+I+I+ DI
Sbjct: 126 LYELARKGIEIERKKRKITIYSIDI 150
>sp|A4IME0|TRUB_GEOTN tRNA pseudouridine synthase B OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=truB PE=3 SV=1
Length = 302
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
++L+NKPKG TS K+RRL+ +KKVGH GTLDP +G+L +C+GKAT++ + G
Sbjct: 4 VLLLNKPKGMTSHDCVAKVRRLLGIKKVGHTGTLDPNVSGVLPICLGKATRIAEFLTGAT 63
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEH-IKDEDIRKAAASFRGEIWQVPPMFSAIKV 429
K Y G LG ATST DAD +I + + I +I S G+I Q PPM+SA+KV
Sbjct: 64 KTYEGEVTLGAATSTEDADGDIIAVQTVDRTIARAEIEAVFRSLTGDIEQTPPMYSAVKV 123
Query: 430 GGEKMYDKARRGESIELSPRRISIFQFDI 458
G+K+Y+ AR G +E RR++I++ ++
Sbjct: 124 NGKKLYEYARAGIEVERPTRRVTIYELEL 152
>sp|A6LEL7|TRUB_PARD8 tRNA pseudouridine synthase B OS=Parabacteroides distasonis (strain
ATCC 8503 / DSM 20701 / NCTC 11152) GN=truB PE=3 SV=1
Length = 235
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 6/156 (3%)
Query: 309 GTMVLVNKPKGWTSFTVCGKLR----RLVKVKK--VGHAGTLDPMATGLLIVCVGKATKL 362
G ++ NKP WTSF + K R R +KVKK VGHAGTLDP+ATG++IVC G+ATK
Sbjct: 6 GEILYFNKPLTWTSFDLVNKFRYKLSRKLKVKKIKVGHAGTLDPLATGVMIVCTGRATKR 65
Query: 363 VDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPP 422
+D +Q K Y +LGE T ++D + + P EHI E + + +F G I Q+PP
Sbjct: 66 IDEFQYQTKEYIATLKLGETTPSFDLEKEIDAVYPTEHITRELVEEVLKTFVGTIQQIPP 125
Query: 423 MFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDI 458
+FSA KV G++ Y+ AR+GE +EL + + I + ++
Sbjct: 126 VFSACKVEGKRAYELARKGEEVELKSKTLVIDELEL 161
>sp|Q73VW3|TRUB_MYCPA tRNA pseudouridine synthase B OS=Mycobacterium paratuberculosis
(strain ATCC BAA-968 / K-10) GN=truB PE=3 SV=1
Length = 293
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 93/148 (62%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+V+KP G TS V G+ RR+ ++VGHAGTLDPMATG+L++ V +ATK++
Sbjct: 6 LVVVDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVLGVERATKILGLLTAAA 65
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K YS RLG+ATST DA+ V + H+ + I A RG+I QVP SAIKV
Sbjct: 66 KSYSATIRLGQATSTDDAEGDVARSVDARHLTSQAIEAAVGGLRGDIHQVPSTVSAIKVA 125
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G++ Y R G+++EL R + I +F++
Sbjct: 126 GKRAYKLVREGQAVELPARPVRIDRFEV 153
>sp|Q46JB9|TRUB_PROMT tRNA pseudouridine synthase B OS=Prochlorococcus marinus (strain
NATL2A) GN=truB PE=3 SV=1
Length = 314
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Query: 307 PFGTMVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRY 366
PFG V+++KP G TS +LR++ +KK+GH+GTLDP TG+L + +G AT+L+
Sbjct: 4 PFG-FVVIDKPSGLTSHDCVNRLRKVFGIKKIGHSGTLDPAVTGVLPIAIGDATRLISYL 62
Query: 367 QGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSA 426
QG K Y G+ +LG T+T D +I+ + W I I +FRGEI Q PP+FS+
Sbjct: 63 QGS-KAYRGIIQLGATTNTDDMQGEIIESKAWPLITQNYINYLLENFRGEILQKPPIFSS 121
Query: 427 IKVGGEKMYDKARRGESIELSPRRISIFQFDI 458
+ + GE+ Y KAR+GE +L P++++I + ++
Sbjct: 122 VHIKGERAYKKARKGEKFDLIPKKVTINKLNL 153
>sp|C3PH13|TRUB_CORA7 tRNA pseudouridine synthase B OS=Corynebacterium aurimucosum
(strain ATCC 700975 / DSM 44827 / CN-1) GN=truB PE=3
SV=1
Length = 297
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 91/148 (61%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+V+KP G TS V GKLRR + +KVGHAGTLDPMATG+L+V + + TK +
Sbjct: 10 LVVVDKPAGMTSHDVVGKLRRFFRTRKVGHAGTLDPMATGVLVVGIERGTKFLAHMVAST 69
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y RLG AT T DA+ EP ++D I + A+ G+I Q P SAIKV
Sbjct: 70 KAYDATIRLGTATHTDDAEGEATWGEPATAVEDSAIAREIAALTGDIMQRPAAVSAIKVD 129
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G++ +++ R GE +EL R +++ +FDI
Sbjct: 130 GKRAHERVRAGEEVELPARPVTVSRFDI 157
>sp|Q38W87|TRUB_LACSS tRNA pseudouridine synthase B OS=Lactobacillus sakei subsp. sakei
(strain 23K) GN=truB PE=3 SV=1
Length = 305
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 316 KPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSG 375
K +G TS K+RR++ +KKVGH+GTLDP G+L +C+G+ATK+VD+ K Y+G
Sbjct: 9 KERGMTSNDCVFKVRRILHMKKVGHSGTLDPNVDGVLPICIGQATKVVDQLVHSGKVYTG 68
Query: 376 VFRLGEATSTWDADSPVIQREPW-EHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEKM 434
LG +T+T D D V++ + E I E I++ ASF GE Q+PPMFSA+KV G ++
Sbjct: 69 EITLGLSTTTEDLDGEVVEEQQLTEPISTEKIKETLASFLGESIQIPPMFSAVKVNGRRL 128
Query: 435 YDKARRGESIELSPRRISIFQFDIE 459
YD AR G+ +E R+I+I QFD++
Sbjct: 129 YDYARAGDPVERPQRKITITQFDLQ 153
>sp|Q8A2U2|TRUB_BACTN tRNA pseudouridine synthase B OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=truB PE=3 SV=1
Length = 240
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 99/163 (60%), Gaps = 7/163 (4%)
Query: 309 GTMVLVNKPKGWTSFTVCGKLR----RLVKVKK--VGHAGTLDPMATGLLIVCVGKATKL 362
G ++ NKP GWTSF V G +R R + VKK VGHAGTLDP+ATG++I+C GKATK
Sbjct: 6 GEVLFFNKPLGWTSFKVVGHVRYHICRRIGVKKLKVGHAGTLDPLATGVMILCTGKATKR 65
Query: 363 VDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPP 422
++ +Q K Y RLG T ++D + + P HI E + + F G I QVPP
Sbjct: 66 IEEFQYHTKEYVATLRLGATTPSYDLEHEIDATYPTGHITRELVEETLTHFLGAIEQVPP 125
Query: 423 MFSAIKVGGEKMYDKARRGESIELSPRRISIFQFD-IERSLED 464
FSA V G++ Y+ AR+GE +EL +++ I + + +E L+D
Sbjct: 126 AFSACMVDGKRAYELARKGEEVELKAKQLVIDEIELLECRLDD 168
>sp|P59884|TRUB_SYNPX tRNA pseudouridine synthase B OS=Synechococcus sp. (strain WH8102)
GN=truB PE=3 SV=1
Length = 291
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Query: 305 DGPFGTMVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVD 364
DGPFG V+++KP G TS + +LRR +K+VGH GTLDP TG+L + +G AT+L+
Sbjct: 2 DGPFG-FVVIDKPAGHTSHSCVSRLRRCYGLKRVGHGGTLDPAVTGVLPIALGPATRLLP 60
Query: 365 RYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMF 424
G K Y GV +LG TS+ D + ++++ PW ++ E++ A A FRG I Q PP
Sbjct: 61 YLPG-DKTYRGVIQLGSITSSDDLEGELLRQAPWPDLQPEELEVALAPFRGPIQQRPPQV 119
Query: 425 SAIKVGGEKMYDKARRGESIELSPRRISIFQFDI 458
SA+ V GE+ + +ARRGE + L PR ++I + +
Sbjct: 120 SAVHVDGERAHARARRGEQMVLPPRPVTIHRLQL 153
>sp|Q03FS1|TRUB_PEDPA tRNA pseudouridine synthase B OS=Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w) GN=truB PE=3 SV=1
Length = 299
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
++ +NK +G TS V K+R +++ KKVGH+GTLDP G+L +CVG+ATK+VD G
Sbjct: 4 IIPINKERGMTSHDVVAKVRGILRTKKVGHSGTLDPSVDGVLPICVGRATKVVDYLMGFG 63
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPW-EHIKDEDIRKAAASFRGEIWQVPPMFSAIKV 429
K Y G LG +T+T D D V++ + E + DE I + + G + Q+PPM+SA+KV
Sbjct: 64 KVYQGSITLGFSTTTEDLDGEVVETKKLDEPLTDEQINQTLTAMTGTLIQIPPMYSAVKV 123
Query: 430 GGEKMYDKARRGESIELSPRRISIFQF 456
G K+Y+ AR GE++E R+I ++ F
Sbjct: 124 KGRKLYEYARAGETVERPQRQIKVYDF 150
>sp|Q5YSE0|TRUB_NOCFA tRNA pseudouridine synthase B OS=Nocardia farcinica (strain IFM
10152) GN=truB PE=3 SV=1
Length = 306
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 98/152 (64%)
Query: 307 PFGTMVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRY 366
P G +++V+K G TS V + R+++ +K+GHAGTLDPMATG+L++ V +ATKL+
Sbjct: 13 PLGGLLVVDKDGGMTSHDVVARCRKILGTRKIGHAGTLDPMATGVLVLGVERATKLLGLL 72
Query: 367 QGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSA 426
K Y+ RLG AT+T DA+ V+ P H+ D ++ A+ G+I QVP SA
Sbjct: 73 TLTTKAYTATIRLGSATTTDDAEGEVLTTVPAGHLGDAEVAAGVAALTGDIQQVPATVSA 132
Query: 427 IKVGGEKMYDKARRGESIELSPRRISIFQFDI 458
IK+GGE+ Y + R GE +EL+ R +++ +F++
Sbjct: 133 IKIGGERAYARHRAGEQVELAARPVTVSRFEV 164
>sp|A2RL47|TRUB_LACLM tRNA pseudouridine synthase B OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=truB PE=3 SV=1
Length = 330
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
V K GWTSF V KLR ++K KK+GH GTLDP TG+L + VGK+T+L++ + K Y
Sbjct: 11 VYKEAGWTSFDVVAKLRGILKTKKIGHGGTLDPSVTGVLPIAVGKSTRLLEYMEAAGKIY 70
Query: 374 SGVFRLGEATSTWDADSPVIQREPWE-HIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGE 432
G +G +T T DAD ++ + P + ++ + +I A + F G+I Q+PPM+SA+K+ G+
Sbjct: 71 EGQVTIGFSTETEDADGAIVNQTPVKNNLTESEIDSAMSHFVGKIKQIPPMYSAVKINGK 130
Query: 433 KMYDKARRGESIELSPRRISIFQF 456
K+Y+ AR G++IE R I+I F
Sbjct: 131 KLYEYARAGQTIERPAREITIKSF 154
>sp|A7GG03|TRUB_CLOBL tRNA pseudouridine synthase B OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=truB PE=3 SV=1
Length = 289
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
V KPKG TSF V +R++ K+KKVGH GTLDP+A+G+L +C+GKATK+VD K Y
Sbjct: 7 VLKPKGITSFDVVRDIRKIAKIKKVGHTGTLDPLASGVLPICIGKATKIVDYIMEGTKTY 66
Query: 374 SGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEK 433
+LG T T+D + V++ E ++ ++ K + G+I QVPPM+SA+K+ G+K
Sbjct: 67 RVEMKLGTTTDTYDREGTVLE-EKEINLTPIEVEKTIKKYIGDIDQVPPMYSALKINGQK 125
Query: 434 MYDKARRGESIELSPRRISIFQFDI 458
+YD AR+G IE R+I I+ I
Sbjct: 126 LYDLARKGIEIEREARKIHIYDICI 150
>sp|Q0I7Z1|TRUB_SYNS3 tRNA pseudouridine synthase B OS=Synechococcus sp. (strain CC9311)
GN=truB PE=3 SV=1
Length = 297
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 305 DGPFGTMVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVD 364
D P G V+++KP G TS ++RR+++ K+VGH GTLDP TG+L + VG+AT+L+
Sbjct: 2 DAPLG-FVVIDKPSGLTSHACVSRMRRVLQTKRVGHGGTLDPAVTGVLPIAVGQATRLLP 60
Query: 365 RYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMF 424
G K Y GV +LG +TST D ++ + W + E++ +A FRG I Q PP
Sbjct: 61 YLPGE-KTYRGVIQLGTSTSTDDLQGEIVAVQNWPDLSVEEMDQALNPFRGTIEQCPPQV 119
Query: 425 SAIKVGGEKMYDKARRGESIELSPRRISIFQFDIER 460
SA+ V GE+ Y +ARRGE I+L R ++I +E
Sbjct: 120 SAVHVNGERAYARARRGEVIDLPARPVTIHSLSLEH 155
>sp|Q02Z55|TRUB_LACLS tRNA pseudouridine synthase B OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=truB PE=3 SV=1
Length = 330
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
V K GWTSF V KLR ++K KK+GH GTLDP TG+L + VGK+T+L++ + K Y
Sbjct: 11 VYKEAGWTSFDVVAKLRCILKTKKIGHGGTLDPSVTGVLPIAVGKSTRLLEYMEAAGKIY 70
Query: 374 SGVFRLGEATSTWDADSPVIQREPWE-HIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGE 432
G +G +T T DAD ++ + P + ++ + +I A + F G+I Q+PPM+SA+K+ G+
Sbjct: 71 EGQVTIGFSTETEDADGAIVNQTPVKNNLTESEIDSAMSRFVGKIKQIPPMYSAVKINGK 130
Query: 433 KMYDKARRGESIELSPRRISIFQF 456
K+Y+ AR G++IE R I+I F
Sbjct: 131 KLYEYARAGQTIERPAREITIKSF 154
>sp|Q97I48|TRUB_CLOAB tRNA pseudouridine synthase B OS=Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=truB PE=3 SV=1
Length = 289
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 94/143 (65%), Gaps = 1/143 (0%)
Query: 316 KPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSG 375
KP G TSF V +++++ K KKVGH GTLDP+A+G+L +C+GKATK+VD K Y
Sbjct: 9 KPIGLTSFDVVRQVKKISKEKKVGHTGTLDPLASGVLPICIGKATKIVDFVMEGKKIYDA 68
Query: 376 VFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEKMY 435
+LGE + T+D + +++ + +I +A SF+GEI QVPPM+SA+KV G K+Y
Sbjct: 69 EMKLGEISDTYDREGKILKVNQVTS-SENNIVEAIMSFQGEILQVPPMYSALKVNGIKLY 127
Query: 436 DKARRGESIELSPRRISIFQFDI 458
D AR+G IE + R+I I+ I
Sbjct: 128 DLARQGIEIERASRKIHIYAIKI 150
>sp|A6KZJ9|TRUB_BACV8 tRNA pseudouridine synthase B OS=Bacteroides vulgatus (strain ATCC
8482 / DSM 1447 / NCTC 11154) GN=truB PE=3 SV=1
Length = 235
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 309 GTMVLVNKPKGWTSFTVCGKLR----RLVKVKK--VGHAGTLDPMATGLLIVCVGKATKL 362
G ++ +KP WTSF V K+R R + VKK VGHAGTLDP+ATG++I+C GKATK
Sbjct: 6 GEVLYFDKPLKWTSFAVVNKIRYHICRKLGVKKIKVGHAGTLDPLATGVMIICTGKATKR 65
Query: 363 VDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPP 422
++ +Q K Y +LG T ++D + + P EHI E + +A F G I Q+PP
Sbjct: 66 IEEFQYHTKEYIATLQLGATTPSFDLEKEIDATYPTEHITRELVEEALQRFIGRIEQIPP 125
Query: 423 MFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDI 458
+FSA KV G++ YD AR+GE +EL + + I + ++
Sbjct: 126 VFSACKVDGKRAYDLARKGEDVELKAKTLIIDEIEL 161
>sp|Q3M356|TRUB_ANAVT tRNA pseudouridine synthase B OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=truB PE=3 SV=1
Length = 293
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
++KP GWTS +LR+++++K+VGHAGTLDP ATG+L + VGKAT+L+ +Y K Y
Sbjct: 7 LDKPFGWTSHDCVARLRKMLRLKRVGHAGTLDPAATGVLPIAVGKATRLL-QYLPSDKAY 65
Query: 374 SGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEK 433
R G T+T D +I +P + +++ + + F G+I Q+PP++SAI+V G++
Sbjct: 66 KATVRFGVQTTTDDLQGEIISSQPCGGLSLSEVKTSLSQFIGKIEQIPPIYSAIQVEGKR 125
Query: 434 MYDKARRGESIELSPRRISIFQFDI 458
+YD AR+GE+IE+ R + +F D+
Sbjct: 126 LYDLARKGETIEVPARTVEVFSIDV 150
>sp|B1GZN9|TRUB_UNCTG tRNA pseudouridine synthase B OS=Uncultured termite group 1
bacterium phylotype Rs-D17 GN=truB PE=3 SV=1
Length = 230
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 96/148 (64%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
++L++KP G TSF K+++++ V+K GH GTLDP +TGLL+V +GKATKL ++
Sbjct: 11 LLLLDKPFGITSFDAVYKIKKVLNVEKTGHCGTLDPASTGLLLVLMGKATKLQAKFMKKD 70
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y F LG T + D D VI +I E I+K F GEI+Q+PPM+SA+K
Sbjct: 71 KVYLSSFLLGMVTDSGDLDGKVISENSVLNINIEKIKKMVEMFEGEIFQIPPMYSALKYN 130
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G+K+ + AR+G +E PR+++I +F++
Sbjct: 131 GKKLCELARQGIEVERKPRKVTIKKFEV 158
>sp|Q9Z5I4|TRUB_MYCLE tRNA pseudouridine synthase B OS=Mycobacterium leprae (strain TN)
GN=truB PE=3 SV=1
Length = 320
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 90/148 (60%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+V+++KP G TS V + RR+ ++VGHAGTLDPMATG+L++ V +ATK++ G
Sbjct: 14 IVVIDKPSGMTSHDVVARCRRIFCTRRVGHAGTLDPMATGVLVLGVDRATKILGLLAGAS 73
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVG 430
K Y RLG+ TST DA+ ++Q H+ DE I A RG+I QVP SAIKV
Sbjct: 74 KEYVATIRLGQTTSTEDAEGELLQCVSARHVTDEAIATAIGRLRGDIKQVPSAVSAIKVD 133
Query: 431 GEKMYDKARRGESIELSPRRISIFQFDI 458
G + Y R G +EL R + I +F++
Sbjct: 134 GRRAYRLVREGHVVELQARPVRIDRFEV 161
>sp|P59880|TRUB_PROMA tRNA pseudouridine synthase B OS=Prochlorococcus marinus (strain
SARG / CCMP1375 / SS120) GN=truB PE=3 SV=1
Length = 313
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
Query: 312 VLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIK 371
+++NKP G TS +LRR+ +K++GH GTLDP TG+L + +GKAT+L+ + K
Sbjct: 9 LVINKPAGLTSHDCVNRLRRIYGIKRIGHGGTLDPAVTGVLPIAIGKATRLLS-FLPSPK 67
Query: 372 GYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGG 431
Y G +LG +T+T D I W+ +K+ I F+GEI Q PP+FS++ + G
Sbjct: 68 TYEGTIKLGISTNTDDLTGETISEHSWDQVKENSILNCLNKFQGEIKQCPPIFSSVHING 127
Query: 432 EKMYDKARRGESIELSPRRISIFQFDI 458
E+ Y KARRGE EL P+ I I++ +
Sbjct: 128 ERAYKKARRGEFFELPPKLIKIYRIKL 154
>sp|Q8XJS1|TRUB_CLOPE tRNA pseudouridine synthase B OS=Clostridium perfringens (strain 13
/ Type A) GN=truB PE=3 SV=1
Length = 294
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 89/144 (61%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
+ K G TSF V +RR+ K+KKVGH GTLDP A+G+L VC+GKATK++D K Y
Sbjct: 7 IYKNTGMTSFDVVAMVRRVAKMKKVGHTGTLDPAASGVLPVCLGKATKIIDYIMENKKVY 66
Query: 374 SGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEK 433
+LG T T+D + V++ E HI ++I SF G I QVPPM+SA+K G +
Sbjct: 67 RVNLKLGMVTDTYDLEGEVLREEDASHITKDEILNCINSFVGTIDQVPPMYSALKQNGVR 126
Query: 434 MYDKARRGESIELSPRRISIFQFD 457
+Y+ AR+G + R+I+I+ +
Sbjct: 127 LYELARQGIEVHREARKITIYSIE 150
>sp|P59873|TRUB_BACAN tRNA pseudouridine synthase B OS=Bacillus anthracis GN=truB PE=3
SV=1
Length = 307
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+VL++KPKG TS KLR++++ K++GH GTLDP TG+L +CVG+ATK+
Sbjct: 4 VVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSET 63
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEH-IKDEDIRKAAASFRGEIWQVPPMFSAIKV 429
K Y G LG +T+T DA V++ + + I +++ +A A+ G I Q+PPMFSA+KV
Sbjct: 64 KTYEGEVTLGFSTTTEDASGEVVETKYVDRVITRKEVEEALATLTGTIEQMPPMFSAVKV 123
Query: 430 GGEKMYDKARRGESIELSPRRISIFQFDIERSLEDRFFF 468
G+K+Y+ AR G+ +E R I+I +F + L+DR F
Sbjct: 124 NGKKLYEYARAGQEVERPVRTITIHEFVL---LDDREVF 159
>sp|Q0TPS0|TRUB_CLOP1 tRNA pseudouridine synthase B OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=truB PE=3 SV=1
Length = 294
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 89/144 (61%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
+ K G TSF V +RR+ K+KKVGH GTLDP A+G+L VC+GKATK++D K Y
Sbjct: 7 IYKNTGMTSFDVVAIVRRVAKMKKVGHTGTLDPAASGVLPVCLGKATKIIDYIMENKKVY 66
Query: 374 SGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEK 433
+LG T T+D + V++ E HI ++I SF G I QVPPM+SA+K G +
Sbjct: 67 RVNLKLGMVTDTYDLEGEVLREEDASHITKDEILNCINSFLGTIDQVPPMYSALKQNGVR 126
Query: 434 MYDKARRGESIELSPRRISIFQFD 457
+Y+ AR+G + R+I+I+ +
Sbjct: 127 LYELARQGIEVHREARKITIYSIE 150
>sp|Q6HF05|TRUB_BACHK tRNA pseudouridine synthase B OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=truB PE=3 SV=1
Length = 307
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+VL++KPKG TS KLR++++ K++GH GTLDP TG+L +CVG+ATK+
Sbjct: 4 VVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSET 63
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEH-IKDEDIRKAAASFRGEIWQVPPMFSAIKV 429
K Y G LG +T+T DA V++ + + I +++ A A+ G I Q+PPMFSA+KV
Sbjct: 64 KTYEGEVTLGFSTTTEDASGEVVETKHVDRVITRKEVEGALAALTGTIEQMPPMFSAVKV 123
Query: 430 GGEKMYDKARRGESIELSPRRISIFQFDIERSLEDRFFF 468
G+K+Y+ AR G+ +E R I+I +F + L+DR F
Sbjct: 124 NGKKLYEYARAGQEVERPVRTITIHEFVL---LDDREVF 159
>sp|A0RHI1|TRUB_BACAH tRNA pseudouridine synthase B OS=Bacillus thuringiensis (strain Al
Hakam) GN=truB PE=3 SV=1
Length = 307
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+VL++KPKG TS KLR++++ K++GH GTLDP TG+L +CVG+ATK+
Sbjct: 4 VVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSET 63
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEH-IKDEDIRKAAASFRGEIWQVPPMFSAIKV 429
K Y G LG +T+T DA V++ + + I +++ A A+ G I Q+PPMFSA+KV
Sbjct: 64 KTYEGEVTLGFSTTTEDASGEVVETKHVDRVITRKEVEGALAALTGTIEQMPPMFSAVKV 123
Query: 430 GGEKMYDKARRGESIELSPRRISIFQFDIERSLEDRFFF 468
G+K+Y+ AR G+ +E R I+I +F + L+DR F
Sbjct: 124 NGKKLYEYARAGQEVERPVRTITIHEFVL---LDDREVF 159
>sp|Q9CGH0|TRUB_LACLA tRNA pseudouridine synthase B OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=truB PE=3 SV=1
Length = 329
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
V K GWTSF V KLR ++K KK+GH GTLDP TG+L V VGK+T+L++ + K Y
Sbjct: 11 VYKEAGWTSFDVVAKLRGILKTKKIGHGGTLDPSVTGVLPVAVGKSTRLLEYMEAAGKIY 70
Query: 374 SGVFRLGEATSTWDADSPVIQREPWE-HIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGE 432
G +G +T T DAD ++ + P E + + +I +F G+I Q+PPM+SA+K+ G+
Sbjct: 71 EGEVTIGFSTETEDADGEIVSKTPVERELTESEIDSVMKNFIGKIKQIPPMYSAVKINGK 130
Query: 433 KMYDKARRGESIELSPRRISIFQF 456
K+Y+ AR G++++ R I+I F
Sbjct: 131 KLYEYARAGQTVDRPTREITIKSF 154
>sp|Q0SSD7|TRUB_CLOPS tRNA pseudouridine synthase B OS=Clostridium perfringens (strain
SM101 / Type A) GN=truB PE=3 SV=1
Length = 294
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 89/144 (61%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
+ K G TSF V +RR+ K+KKVGH GTLDP A+G+L VC+GKATK++D K Y
Sbjct: 7 IYKNTGMTSFDVVAMVRRVAKMKKVGHTGTLDPEASGVLPVCLGKATKIIDYIMENKKVY 66
Query: 374 SGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEK 433
+LG T T+D + V++ E HI ++I SF G I QVPPM+SA+K G +
Sbjct: 67 RVNLKLGMVTDTYDLEGEVLREEDASHITKDEILNCINSFVGTIDQVPPMYSALKQNGVR 126
Query: 434 MYDKARRGESIELSPRRISIFQFD 457
+Y+ AR+G + R+I+I+ +
Sbjct: 127 LYELARQGIEVHREARKITIYSIE 150
>sp|Q8YWR1|TRUB_NOSS1 tRNA pseudouridine synthase B OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=truB PE=3 SV=1
Length = 293
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 314 VNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGY 373
+NK GWTS +LR+++++K+VGHAGTLDP ATG+L + VGKAT+L+ +Y K Y
Sbjct: 7 LNKQFGWTSHDCVARLRKMLRLKRVGHAGTLDPAATGVLPIAVGKATRLL-QYLPSDKAY 65
Query: 374 SGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEK 433
R G T+T D +I +P + +++ A F G+I Q+PP++SAI+V G++
Sbjct: 66 KATVRFGVQTTTDDLQGEIITSQPCRGLSLSEVKTALPQFIGKIEQIPPIYSAIQVEGKR 125
Query: 434 MYDKARRGESIELSPRRISIFQFDI 458
+YD AR+GE IE+ R + +F D+
Sbjct: 126 LYDLARKGEIIEVPARTVEVFSIDV 150
>sp|Q636L6|TRUB_BACCZ tRNA pseudouridine synthase B OS=Bacillus cereus (strain ZK / E33L)
GN=truB PE=3 SV=1
Length = 307
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 311 MVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMI 370
+VL++KPKG TS KLR++++ K++GH GTLDP TG+L +CVG+ATK+
Sbjct: 4 VVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSET 63
Query: 371 KGYSGVFRLGEATSTWDADSPVIQREPWEH-IKDEDIRKAAASFRGEIWQVPPMFSAIKV 429
K Y G LG +T+T DA V++ + + I +++ +A + G I Q+PPMFSA+KV
Sbjct: 64 KTYEGEVTLGFSTTTEDASGEVVETKHVDRVITRKEVEEALVTLTGTIEQMPPMFSAVKV 123
Query: 430 GGEKMYDKARRGESIELSPRRISIFQFDIERSLEDRFFF 468
G+K+Y+ AR G+ +E R I+I +F + L+DR F
Sbjct: 124 NGKKLYEYARAGQEVERPVRTITIHEFVL---LDDREVF 159
>sp|Q88VL5|TRUB_LACPL tRNA pseudouridine synthase B OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=truB PE=3 SV=1
Length = 307
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 316 KPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSG 375
KP+G TSF K+RRL + +KVGH+GTLDP G+L +C+G ATK+V K Y G
Sbjct: 10 KPRGMTSFDCVAKIRRLYQTRKVGHSGTLDPNVDGVLPICIGNATKVVQFLVASGKEYQG 69
Query: 376 VFRLGEATSTWDADSPVIQREP-WEHIKDEDIRKAAASFRGEIWQVPPMFSAIKVGGEKM 434
LG AT+T D D I R+ E + + A A G I Q+PPMFSA+KV G ++
Sbjct: 70 SITLGFATTTEDLDGEEIARQAVTEPFTSDQVDAALAQMTGAITQIPPMFSAVKVNGRRL 129
Query: 435 YDKARRGESIELSPRRISIFQF 456
YD AR GE++E R I+I F
Sbjct: 130 YDYARSGETVERPERHITISSF 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,334,680
Number of Sequences: 539616
Number of extensions: 8855558
Number of successful extensions: 33376
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 31282
Number of HSP's gapped (non-prelim): 1462
length of query: 485
length of database: 191,569,459
effective HSP length: 121
effective length of query: 364
effective length of database: 126,275,923
effective search space: 45964435972
effective search space used: 45964435972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)