Your job contains 1 sequence.
>011457
MPGPAMDLEPVEPQSLKKLSLKSQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGG
IKSTNEPRRQVNSTTIAHRNQPSGSSDVLALPGPEGSRDAQKAGAQNALVVGPSAQPKGL
NNVGASGKSSAIVSTSASSERNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRS
VAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQ
VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGH
DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS
ASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQ
QAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKPPK
DIRRF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011457
(485 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 1964 5.6e-203 1
TAIR|locus:2089303 - symbol:AT3G16650 "AT3G16650" species... 1825 3.0e-188 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 1121 8.2e-122 3
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 1193 2.8e-121 1
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 1135 2.8e-120 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 1132 7.5e-120 2
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 1130 1.2e-119 2
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 1129 1.5e-119 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 1129 1.5e-119 2
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 1127 2.2e-118 2
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 1151 7.9e-117 1
WB|WBGene00006481 - symbol:plrg-1 species:6239 "Caenorhab... 1140 1.2e-115 1
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 1114 6.6e-113 1
ASPGD|ASPL0000058626 - symbol:AN1208 species:162425 "Emer... 1113 8.4e-113 1
DICTYBASE|DDB_G0279507 - symbol:plrg1 "putative RNA splic... 1094 8.7e-111 1
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 953 7.6e-96 1
GENEDB_PFALCIPARUM|PFC0100c - symbol:PFC0100c "regulatory... 917 5.0e-92 1
UNIPROTKB|O97334 - symbol:PFC0100c "Regulatory protein, p... 917 5.0e-92 1
CGD|CAL0005182 - symbol:orf19.5413 species:5476 "Candida ... 734 1.2e-72 1
UNIPROTKB|Q5A7Q3 - symbol:PRP46 "Pre-mRNA-splicing factor... 734 1.2e-72 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 346 1.6e-31 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 350 1.6e-30 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 335 2.3e-30 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 324 3.4e-29 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 322 5.6e-29 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 322 5.6e-29 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 322 5.6e-29 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 322 5.6e-29 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 322 5.6e-29 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 322 5.6e-29 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 322 5.6e-29 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 320 9.1e-29 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 316 2.4e-28 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 313 5.4e-28 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 308 2.2e-27 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 325 4.1e-27 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 305 5.0e-27 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 322 8.8e-27 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 294 9.6e-26 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 294 9.6e-26 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 309 4.1e-25 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 288 4.7e-25 1
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 307 7.0e-25 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 301 2.5e-24 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 305 3.0e-24 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 301 3.2e-24 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 299 4.6e-24 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 300 4.8e-24 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 300 4.8e-24 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 300 4.8e-24 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 300 4.9e-24 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 300 5.0e-24 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 299 5.6e-24 1
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 299 6.4e-24 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 299 7.6e-24 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 299 7.7e-24 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 277 8.3e-24 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 296 9.9e-24 1
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 297 1.1e-23 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 295 1.4e-23 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 293 2.4e-23 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 293 2.4e-23 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 296 4.1e-23 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 295 1.1e-22 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 268 2.6e-22 1
DICTYBASE|DDB_G0291231 - symbol:mhkA "myosin heavy chain ... 289 2.7e-22 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 263 3.1e-22 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 263 3.1e-22 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 263 3.1e-22 1
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 263 3.1e-22 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 261 5.2e-22 1
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 261 5.2e-22 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 281 5.9e-22 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 275 6.5e-22 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 277 7.2e-22 1
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 259 8.6e-22 1
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 258 1.1e-21 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 274 1.1e-21 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 265 1.7e-21 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 256 1.9e-21 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 256 1.9e-21 1
UNIPROTKB|Q5JKX0 - symbol:B1147A04.35 "cDNA clone:J013000... 275 2.2e-21 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 254 3.1e-21 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 268 3.7e-21 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 253 4.0e-21 1
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 253 4.0e-21 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 286 4.7e-21 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 266 6.5e-21 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 265 8.7e-21 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 273 1.0e-20 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 269 1.3e-20 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 271 1.9e-20 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 247 1.9e-20 1
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 247 1.9e-20 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 262 2.0e-20 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 270 2.4e-20 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 266 3.1e-20 1
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 259 3.4e-20 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 260 3.8e-20 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 265 4.2e-20 1
WARNING: Descriptions of 1441 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 1964 (696.4 bits), Expect = 5.6e-203, P = 5.6e-203
Identities = 359/491 (73%), Positives = 408/491 (83%)
Query: 1 MPGPAMDLEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGG 60
MP P ++EP+E Q KR+L+LFSP HG+ PPPDPE+K+IR+SHK+ + +GG
Sbjct: 1 MPAPTTEIEPIEAQSLKKLSLKSLKRSLELFSPVHGQFPPPDPEAKQIRLSHKMKVAFGG 60
Query: 61 IKST-NEPRRQVNSTTIAHRNQPSGSSDVLALPGPEGSRDAQKAGAQNALVVGPSAQ--- 116
++ ++P RQ + N+ G S+ L+L PEGS+ QK ++A+VVGP+
Sbjct: 61 VEPVVSQPPRQPDRI-----NEQPGPSNALSLAAPEGSKSTQKGATESAIVVGPTLLRPI 115
Query: 117 -PKGLNNVGXXXXXXXXX-XXXXXXERNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGH 174
PKGLN G +RNLST+A+MERIPS+WPRPEWHAPWK YRVI GH
Sbjct: 116 LPKGLNYTGSSGKSTTIIPANVSSYQRNLSTAALMERIPSRWPRPEWHAPWKNYRVIQGH 175
Query: 175 LGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
LGWVRSVAFD SN WFCTGSADRTIKIWDVA G LKLTLTGHIEQVRGLAVS++HTYMFS
Sbjct: 176 LGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFS 235
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCL LHPT+D+LLTGGRDSVCRVWDIRTKMQI
Sbjct: 236 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQI 295
Query: 295 FALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPT 354
FAL+GHDNTVCSVFTRPTDPQVVTGSHD+TIKFWDLRYGKTM TLTHHKKSVRAM LHP
Sbjct: 296 FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPK 355
Query: 355 EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWK 414
E+ FASASA+N KKF+LPKGEF HNMLSQQKTIIN+MAVNE+GV+ TGGDNGS+WFWDWK
Sbjct: 356 ENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWDWK 415
Query: 415 SGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATPETHPL 474
SGH+FQQ++TIVQPGSL+SEAGIYA YD TGSRLVTCEADKTIKMW+EDE ATPETHP+
Sbjct: 416 SGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKEDENATPETHPI 475
Query: 475 NFKPPKDIRRF 485
NFKPPK+IRRF
Sbjct: 476 NFKPPKEIRRF 486
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 1825 (647.5 bits), Expect = 3.0e-188, P = 3.0e-188
Identities = 334/482 (69%), Positives = 390/482 (80%)
Query: 5 AMDLEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGGIKST 64
A++ E VE Q +RA ++FSP HG+ P PDPESK+IR+ HK+ + +GG++
Sbjct: 5 ALNRE-VETQSLKKLSLKSVRRAREIFSPVHGQFPQPDPESKRIRLCHKIQVAFGGVEPA 63
Query: 65 NEPRRQVNSTTIAHRNQPSGSSDVLALPGPEGSRDAQKAGAQNALVVGPSAQPKGLNNVG 124
++P R + H ++ + LALPGP+GS++ +K+ + ALVVGP+ P+ LNN G
Sbjct: 64 SKPTRIAD-----HNSEKTAPLKALALPGPKGSKELRKSATEKALVVGPTLPPRDLNNTG 118
Query: 125 XXXXXXXXXXX-XXXXERNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAF 183
ERNLST+A+MER+PS+WPRPEWHAPWK YRV+ GHLGWVRSVAF
Sbjct: 119 NPGKSTAILPAPGSFSERNLSTAALMERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAF 178
Query: 184 DHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKC 243
D SN WFCTGSADRTIKIWDVA G LKLTLTGHI QVRGLAVS++HTYMFSAGDDKQVKC
Sbjct: 179 DPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKC 238
Query: 244 WDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNT 303
WDLEQNKVIRSYHGHL GVYCL LHPT+D++LTGGRDSVCRVWDIRTKMQIF L HD+
Sbjct: 239 WDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSD 297
Query: 304 VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASA 363
V SV RPTDPQV+TGSHDSTIKFWDLRYGK+M T+T+HKK+VRAMALHP E+ F SASA
Sbjct: 298 VFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASA 357
Query: 364 ENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQ 423
+NIKKF+LPKGEF HNMLS Q+ IIN++AVNE+GV+ TGGD G LWFWDWKSGHNFQ+A+
Sbjct: 358 DNIKKFSLPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGGDKGGLWFWDWKSGHNFQRAE 417
Query: 424 TIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKPPKDIR 483
TIVQPGSL+SEAGIYA YD TGSRLVTCE DKTIKMW+EDE ATPETHPLNFKPPK+IR
Sbjct: 418 TIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKTIKMWKEDEDATPETHPLNFKPPKEIR 477
Query: 484 RF 485
RF
Sbjct: 478 RF 479
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 1121 (399.7 bits), Expect = 8.2e-122, Sum P(3) = 8.2e-122
Identities = 200/337 (59%), Positives = 258/337 (76%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
N +++ + ++ P+ P+P+WH PWK YRVISGHLGWVR +A + N WF TGSADRTIKI
Sbjct: 174 NKNSALVPKKAPTM-PKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKI 232
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
WD+A G LKL+LTGHI VRG+ VS++ Y+FS G+DKQVKCWDLE NKVIR YHGHLS
Sbjct: 233 WDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSA 292
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
VY L LHPTID+L+T RDS R+WD+RTK + L+GH N V +V + +PQVVTGSH
Sbjct: 293 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSH 352
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNML 381
D+TI+ WDL GKT +TLT+HKKSVRA+ LHP FAS S +NIK++ P G F+ N L
Sbjct: 353 DTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDNIKQWKFPDGNFIQN-L 411
Query: 382 SQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
S IIN++ VN +GVL +G DNG++ WDW++G+NFQ+ VQPGSLDSE+GI+A
Sbjct: 412 SGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACV 471
Query: 442 YDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
+D + SRL+T EADKTIK+++ED+TAT ETHP+++KP
Sbjct: 472 FDQSESRLLTAEADKTIKVYKEDDTATEETHPISWKP 508
Score = 72 (30.4 bits), Expect = 8.2e-122, Sum P(3) = 8.2e-122
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 8 LEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGGI 61
+E V+ KR D+F + + P D ES K++++ KL EYG +
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVADNAKPVPLDDESHKVKMAVKLRTEYGSV 55
Score = 40 (19.1 bits), Expect = 8.2e-122, Sum P(3) = 8.2e-122
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 76 IAHRNQPSGSSDVLALPGPEGSRDA 100
I+ R+QP G S +A+ P G++++
Sbjct: 155 ISERSQPPGMS--MAMMEPGGNKNS 177
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 230/480 (47%), Positives = 306/480 (63%)
Query: 6 MDLEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYG----GI 61
M +E V+ KR DLF G LP D +K+R S K YG +
Sbjct: 1 MAMEDVQKHSVHTLIFRSLKRTHDLFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKV 60
Query: 62 KSTNEPRRQVNSTTIAHRNQPSGSSDVLALPGPEGSRDAQKAGAQNALVVGPSAQPKGLN 121
E R+ + T + GS AGA+ A P +
Sbjct: 61 AKIGEARKASGAQTPGDKTLAITDGSATDAASGAGSLVKYNAGARPAEKTAPL-----VT 115
Query: 122 NVGXXXXXXXXXXXXXXXERNLSTSAIMERIPSKWP---RPEWHAPWKCYRVISGHLGWV 178
N + ++ ++ IP K P +P+WHAPWK RVISGHLGWV
Sbjct: 116 GTHTSLVRASLANSNADMSANGAIASHLQLIPKKAPSIPKPKWHAPWKLSRVISGHLGWV 175
Query: 179 RSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDD 238
R +A + N WF TG+ DR IKIWD+A G LKL+LTGH+ VRG+AVS+KH Y+FS G+D
Sbjct: 176 RCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGED 235
Query: 239 KQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALA 298
+QVKCWDLE NKVIR YHGHLS VY L LHPTID+L T GRDS R+WD+RTK + L
Sbjct: 236 RQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLT 295
Query: 299 GHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCF 358
GH NTV SV + T+PQ++TGSHDST++ WDL GK++ TLT+HKKSVR++ LHP+ F
Sbjct: 296 GHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMF 355
Query: 359 ASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHN 418
ASAS +NIK++ P+G+F+ N +S +I+N MA N EGVL +GGDNG+++FWDW++G+N
Sbjct: 356 ASASPDNIKQWRCPEGKFVQN-ISGHTSIVNCMAANSEGVLVSGGDNGTMFFWDWRTGYN 414
Query: 419 FQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
FQ+ Q VQPGS+DSEAGI+A+ +D +GSRL+T EADKTIK+++ED+ A+ E+HP+N++P
Sbjct: 415 FQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYKEDDEASEESHPINWRP 474
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 1135 (404.6 bits), Expect = 2.8e-120, Sum P(2) = 2.8e-120
Identities = 203/337 (60%), Positives = 257/337 (76%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
N SA+M + P+P+WH PWK YRVISGHLGWVR +A + N WF TGSADRTIKI
Sbjct: 171 NTKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKI 230
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
WD+A G LKL+LTGHI VRG+ VS++ Y+FS G+DKQVKCWDLE NKVIR YHGHLS
Sbjct: 231 WDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSA 290
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
VY L LHPTID+L+T RDS R+WD+RTK + L+GH N V +V + +PQ++TGSH
Sbjct: 291 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 350
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNML 381
D+TI+ WDL GKT +TLT+HKKSVRA+ LHP FAS S +NIK++ P G F+ N L
Sbjct: 351 DTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDNIKQWKFPDGGFIQN-L 409
Query: 382 SQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
S IIN++AVN +GVL +G DNG++ WDW++G+NFQ+ VQPGSLDSE+GI+A +
Sbjct: 410 SGHNAIINTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACA 469
Query: 442 YDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
+D + SRL+T EADKTIK++REDETAT ETHP+++KP
Sbjct: 470 FDRSESRLLTAEADKTIKVYREDETATEETHPVSWKP 506
Score = 69 (29.3 bits), Expect = 2.8e-120, Sum P(2) = 2.8e-120
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 8 LEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGGIKSTNEP 67
+E V+ KR D+F +G+ P D ES K +++ KL EYG + + P
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPV--LHMP 59
Query: 68 RRQVNSTTIAHRNQP 82
+ N +N P
Sbjct: 60 TSKENLKEKGPQNAP 74
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 1132 (403.5 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 201/337 (59%), Positives = 256/337 (75%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
N SA+M + P+P+WH PWK YRVISGHLGWVR +A + N WF TGSADRTIKI
Sbjct: 171 NTKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKI 230
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
WD+A G LKL+LTGHI VRG+ VS++ Y+FS G+DKQVKCWDLE NKVIR YHGHLS
Sbjct: 231 WDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSA 290
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
VY L LHPTID+L+T RDS R+WD+RTK + L+GH N V +V + +PQ++TGSH
Sbjct: 291 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 350
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNML 381
D+TI+ WDL GKT +TLT+HKKSVRA+ LHP FAS S +NIK++ P G F+ N L
Sbjct: 351 DTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQN-L 409
Query: 382 SQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
S IIN++ VN +GVL +G DNG++ WDW++G+NFQ+ VQPGSLDSE+GI+A +
Sbjct: 410 SGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACA 469
Query: 442 YDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
+D + SRL+T EADKTIK++RED+TAT ETHP+++KP
Sbjct: 470 FDQSESRLLTAEADKTIKVYREDDTATEETHPVSWKP 506
Score = 68 (29.0 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 8 LEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGGI 61
+E V+ KR D+F +G+ P D ES K +++ KL EYG +
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPV 55
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 1130 (402.8 bits), Expect = 1.2e-119, Sum P(2) = 1.2e-119
Identities = 202/337 (59%), Positives = 257/337 (76%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
N SA+M + P+P+WH PWK YRVISGHLGWVR +A + N WF TGSADRTIKI
Sbjct: 170 NTKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKI 229
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
WD+A G LKL+LTGHI VRG+ VS++ Y+FS G+DKQVKCWDLE NKVIR YHGHLS
Sbjct: 230 WDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSA 289
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
VY L LHPT+D+L+T RDS R+WD+RTK + L+GH N V +V + +PQ++TGSH
Sbjct: 290 VYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 349
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNML 381
D+TI+ WDL GKT +TLT+HKKSVRA+ LHP FAS S +NIK++ P G F+ N L
Sbjct: 350 DTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDNIKQWKFPDGGFIQN-L 408
Query: 382 SQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
S IIN++AVN +GVL +G DNG++ WDW++G+NFQ+ VQPGSLDSE+GI+A +
Sbjct: 409 SGHNAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACA 468
Query: 442 YDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
+D + SRL+T EADKTIK++REDETAT ETHP+++KP
Sbjct: 469 FDRSESRLLTAEADKTIKVYREDETATEETHPVSWKP 505
Score = 68 (29.0 bits), Expect = 1.2e-119, Sum P(2) = 1.2e-119
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 8 LEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGGI 61
+E V+ KR D+F +G+ P D ES K +++ KL EYG +
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPV 55
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 1129 (402.5 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 200/337 (59%), Positives = 256/337 (75%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
N SA+M + P+P+WH PWK YRVISGHLGWVR +A + N WF TGSADRTIKI
Sbjct: 170 NAKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKI 229
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
WD+A G LKL+LTGHI VRG+ VS++ Y+FS G+DKQVKCWDLE NKVIR YHGHLS
Sbjct: 230 WDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSA 289
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
VY L LHPTID+L+T RDS R+WD+RTK + L+GH N V +V + +PQ++TGSH
Sbjct: 290 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 349
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNML 381
D+TI+ WDL GKT +TLT+HKKSVRA+ LHP FAS S +NIK++ P G F+ N L
Sbjct: 350 DTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQN-L 408
Query: 382 SQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
S IIN++ VN +GVL +G DNG++ WDW++G+NFQ+ VQPGSLDSE+GI+A +
Sbjct: 409 SGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACA 468
Query: 442 YDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
+D + SRL+T EADKTIK+++ED+TAT ETHP+++KP
Sbjct: 469 FDQSESRLLTAEADKTIKVYKEDDTATEETHPVSWKP 505
Score = 68 (29.0 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 8 LEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGGI 61
+E V+ KR D+F +G+ P D ES K +++ KL EYG +
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPV 55
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 1129 (402.5 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 200/337 (59%), Positives = 256/337 (75%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
N SA+M + P+P+WH PWK YRVISGHLGWVR +A + N WF TGSADRTIKI
Sbjct: 172 NAKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKI 231
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
WD+A G LKL+LTGHI VRG+ VS++ Y+FS G+DKQVKCWDLE NKVIR YHGHLS
Sbjct: 232 WDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSA 291
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
VY L LHPTID+L+T RDS R+WD+RTK + L+GH N V +V + +PQ++TGSH
Sbjct: 292 VYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSH 351
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNML 381
D+TI+ WDL GKT +TLT+HKKSVRA+ LHP FAS S +NIK++ P G F+ N L
Sbjct: 352 DTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQN-L 410
Query: 382 SQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
S IIN++ VN +GVL +G DNG++ WDW++G+NFQ+ VQPGSLDSE+GI+A +
Sbjct: 411 SGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACA 470
Query: 442 YDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
+D + SRL+T EADKTIK+++ED+TAT ETHP+++KP
Sbjct: 471 FDQSESRLLTAEADKTIKVYKEDDTATEETHPVSWKP 507
Score = 68 (29.0 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 8 LEPVEPQXXXXXXXXXQKRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGGI 61
+E V+ KR D+F +G+ P D ES K +++ KL EYG +
Sbjct: 2 VEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPV 55
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 1127 (401.8 bits), Expect = 2.2e-118, Sum P(2) = 2.2e-118
Identities = 204/335 (60%), Positives = 257/335 (76%)
Query: 145 TSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV 204
T ++ R P+P+WH PWK YRVISGHLGWVRS+A + N WF TGSADRTIKIWD+
Sbjct: 178 TRTLVPRKAPTMPKPQWHPPWKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDL 237
Query: 205 AKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYC 264
A G LKL+LTGHI VRG+AVS++ Y+FS G+DKQVKCWDLE NKVIR YHGHLS VY
Sbjct: 238 ASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYD 297
Query: 265 LGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVT-GSHDS 323
L LHPTID+L+T RD+ RVWDIRTK + L+GH NTV +V + +PQVVT GSHD+
Sbjct: 298 LDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDT 357
Query: 324 TIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQ 383
TI+ WDL GKT TLT+HKKSVRA+ LHP + FAS S +NIK++ P G F+ N LS
Sbjct: 358 TIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDNIKQWKFPDGNFIQN-LSG 416
Query: 384 QKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
IIN++AVN +GVL +G DNG++ WDW++G+NFQ+ VQPGSLDSE+GI++ +D
Sbjct: 417 HNAIINTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFD 476
Query: 444 VTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
+ SRL+T EADKTIK+++ED+TAT E+HP+N+KP
Sbjct: 477 QSESRLITAEADKTIKVYKEDDTATEESHPVNWKP 511
Score = 59 (25.8 bits), Expect = 2.2e-118, Sum P(2) = 2.2e-118
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 25 KRALDLFSPTHGRLPPPDPESKKIRISHKLNLEYGGIKSTNEPRRQVNSTTIAHRNQPSG 84
KR D+F H + D +S K++++ K+ EY + + ++ H + P G
Sbjct: 26 KRTHDMFVADHAKPIAQDEQSFKVKMAAKMRAEYKAVLHMPVLKEGREKGSL-HTSDPYG 84
Query: 85 SSDVLALPGPE 95
S A P P+
Sbjct: 85 QS---AYPLPD 92
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 204/341 (59%), Positives = 263/341 (77%)
Query: 144 STSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWD 203
S +++++R ++ RPEWHAPW RVISGHLGWVR V + N WFCTG+ DRTIKIWD
Sbjct: 132 SQASLVKRTLAEQIRPEWHAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWD 191
Query: 204 VAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY 263
+A G LKLTLTGHI VRGLAVS +H Y+FS G+DK VKCWDLE NKVIR YHGHLSGVY
Sbjct: 192 LASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVY 251
Query: 264 CLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDS 323
L LHPT+D+L+T GRD+V RVWD+RT+ + L+GH +TV S+ + DPQVVTGS DS
Sbjct: 252 ALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDS 311
Query: 324 TIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQ 383
TI+ WDL GKT+ TLTHHKK+VRA++LHP E FAS S++NIK + P+G F+ N
Sbjct: 312 TIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKHWKFPEGAFMGNF-EG 370
Query: 384 QKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
I+N++++N + V+ +G DNGS+ FWDWKSGH +Q+ Q++VQPGSLDSEAGI+A S+D
Sbjct: 371 HNAIVNTLSINSDNVMFSGADNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFD 430
Query: 444 VTGSRLVTCEADKTIKMWREDETATPETHPLNFKPPKDIRR 484
TG RL+TCEADK++K++++ + ATPETHP P ++RR
Sbjct: 431 KTGLRLITCEADKSVKIYKQVDNATPETHPNLPWTPSNLRR 471
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
Identities = 232/459 (50%), Positives = 296/459 (64%)
Query: 25 KRALDLFSPTHGRLPPPDPESKKIRI-SHKLNLEYGG-IKSTNEPR-RQVNSTTIAHRNQ 81
KRA DLF + + PPP PE I S K EYG IK E + R+ N +Q
Sbjct: 41 KRAQDLFYHDYAQ-PPPMPEENDSLIRSMKRKHEYGNVIKKVEEMKVRRENEMLALPTSQ 99
Query: 82 PS-GSSDVLALPG-PEGSRDAQKAGAQNALVVGPSAQPKGLNNVGXXXXXXXXXXXXXXX 139
P G+ V+A G P D LV Q +G G
Sbjct: 100 PMHGTGSVIASAGTPLAITDGS-----GKLV----NQQQGSAKSGTLLPLVPLGNSSKG- 149
Query: 140 ERNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTI 199
E N + S + + P +P+WHAPWK YRV SGH GWVR+V + N WF +G ADR I
Sbjct: 150 EDNTTRSLLPSKAPMMM-KPKWHAPWKLYRVASGHTGWVRAVDVEPGNQWFASGGADRII 208
Query: 200 KIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHL 259
KIWD+A G LKL+LTGHI VR + VS +H ++FS G+DKQVKCWDLE NKVIR YHGHL
Sbjct: 209 KIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHL 268
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTG 319
S V L +HP++D+L+T RDS RVWD+RTK Q+ AGH NTV V + DPQV+T
Sbjct: 269 SAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITA 328
Query: 320 SHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHN 379
SHD+T++ WDL G++M TLTHHKKSVRA+ +HP + FASAS +NIK++ LPKGEF+ N
Sbjct: 329 SHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKLPKGEFMQN 388
Query: 380 MLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYA 439
LS IIN+++ N++GV+ +G DNGSL FWDW+SG FQ+ QT QPGS++SEAGIYA
Sbjct: 389 -LSGHNAIINTLSSNDDGVVVSGADNGSLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYA 447
Query: 440 LSYDVTGSRLVTCEADKTIKMWREDETATPETHPLNFKP 478
+D TG RL+T EADKTIKM++ED+ AT E+HP+ ++P
Sbjct: 448 SCFDKTGLRLITAEADKTIKMYKEDDEATEESHPIVWRP 486
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 198/328 (60%), Positives = 247/328 (75%)
Query: 158 RPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHI 217
+PEWH PWK RVISGHLGWVR++A + N WF +G+ DRTIKIWD+A G L+LTLTGHI
Sbjct: 184 KPEWHRPWKLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHI 243
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
VRGLAVS +H Y+FS +DK VKCWDLE NKVIR YHGHLSGVY L LHPT+D+L+TG
Sbjct: 244 STVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTG 303
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
GRD V RVWD+RT+ I L+GH TV + + DPQV+TGS DST++ WDL GKTM
Sbjct: 304 GRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMG 363
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG 397
LTHHKK VRA+A HPTE FAS SA +IK++ P+G F+ N +IIN+++VN++
Sbjct: 364 VLTHHKKGVRALATHPTEFTFASGSAGSIKQWKCPEGAFMQNF-EGHNSIINTLSVNDQN 422
Query: 398 VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKT 457
V +G DNGS+ FWDWK+GH FQ T QPGSL +E+GI+ ++D +GSRL+ EADKT
Sbjct: 423 VFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKT 482
Query: 458 IKMWREDETATPETHPLNFKPPKDIRRF 485
IK+W+ED ATPETHPL++KP R+F
Sbjct: 483 IKIWKEDMEATPETHPLDWKPTLGRRKF 510
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 219/453 (48%), Positives = 293/453 (64%)
Query: 38 LPPPDPESKKIRISHKLNLE-YGGIKSTNEPRRQVNSTTIAHRNQPSGSSDVLALPGPEG 96
+P P + +RIS K E +G P S +++R + V LP
Sbjct: 4 IPSTTP-GEAVRISAKRTAELFGPEYLMVTPSASNGSIGVSYRRKTE-YEHVKELPPALA 61
Query: 97 SRDAQKAGAQNALV-VGPSAQPKGLNNV-GXXXXXXXXXXXXXXXERNLSTSAIMERIPS 154
++ AQ A A++ + ++ G + G + +++++R PS
Sbjct: 62 AKQAQAAAARSKRPKISSRSEGSGSGDKSGASTALVRRGGRASGAAGDDKPTSLIQR-PS 120
Query: 155 --KWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT 212
+ PEWHAPWK RVISGHLGWVRS+A + +N WF +G+ DRTIKIW++A G L+LT
Sbjct: 121 ATRQQPPEWHAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLT 180
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID 272
LTGHI VRGLAVS +H Y+FS G+DK VKCWDLE NKVIR YHGHLSGVY L LHP +D
Sbjct: 181 LTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLD 240
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
+L+TGGRD V RVWD+RT+ I L+GH TV V + DPQV+TGS D+T++ WDL
Sbjct: 241 LLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAA 300
Query: 333 GKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMA 392
GKTM LTHHKK +R++A HP E FASAS +IK++ P GEF+ N IIN+++
Sbjct: 301 GKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQNF-EGHNAIINTLS 359
Query: 393 VNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC 452
VNE+ VL +GGDNGS+ FWDWK+G+ +Q T QPGSL++EAGI ++D TG RL+T
Sbjct: 360 VNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITG 419
Query: 453 EADKTIKMWREDETATPETHPLNFKPPKDIRRF 485
EADKTIK+W++D+ ATPETHP+ + P +R+
Sbjct: 420 EADKTIKVWKQDDQATPETHPVTWAPTLGRQRY 452
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 209/445 (46%), Positives = 292/445 (65%)
Query: 42 DPESKKIRISHKLNLEYGGIKSTN--EPRRQVNSTTIAHRNQPSGSSDVLALPGPEGSRD 99
+ ESK+I++ K+ EY +K P+++ + T + P+ +S + P E +
Sbjct: 76 EDESKRIKLYSKIKDEYEPVKDLPMVAPQQRKPAATAKQTSTPTTTSTE-SKPTIE-EME 133
Query: 100 AQKAGAQNALVVGPSAQPKGLNNVGXXXXXXXXXXXXXXXERNLSTSAIMERIPSKWPRP 159
K+ N + P K + N T I + P + +P
Sbjct: 134 IDKS-IDNIIKSLPKQDEKRRKIEDDKSSQITIYNKTNTDDINNRT-LINQYEPLTYTKP 191
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
EWH PWK RVISGH GWVR++A D SN WF TGS D TIK+WD+A G LK+TLTGH+
Sbjct: 192 EWHPPWKLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSA 251
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
+RGL VSS+H Y+FS G+D +V CWDLE NK +R+Y+GH GVY + LHPT+D+L +GGR
Sbjct: 252 IRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGR 311
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D+ RVWD+RT+ IF + GH T+ S+ ++ DPQV++GS D+T+K WDL G + TL
Sbjct: 312 DNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATL 371
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL 399
T+HKK VR+M +H E FA+ +A+NIK++ P G F+ N LS +IIN+MA+N + VL
Sbjct: 372 TNHKKGVRSMVIHEKEYSFATGAADNIKQWKCPDGSFIKN-LSGHNSIINAMALNADNVL 430
Query: 400 ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIK 459
+GGDNGS+ FWDWK+G+ FQ+ Q+IVQPGSL+ EAGI+ +++D TGSRL+TCEADKTIK
Sbjct: 431 VSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGEAGIFDMAFDKTGSRLITCEADKTIK 490
Query: 460 MWREDETATPETHPL-NFKPPKDIR 483
++EDE ATP THP+ ++KP + R
Sbjct: 491 FYKEDEDATPYTHPVVDWKPKNNDR 515
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 173/330 (52%), Positives = 232/330 (70%)
Query: 158 RPEWHAPWKCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGH 216
RPEWHAPWK RVI+GHLGWVR VA D N WF TGS D T+K+WD+A G LK TL GH
Sbjct: 122 RPEWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGH 181
Query: 217 IEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
+ VR +AVS +H Y+FS +DK VKCWDLE+N++IR Y+GHLSGV + +HPT+D++ T
Sbjct: 182 VMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIAT 241
Query: 277 GGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTM 336
GRDSV ++WD+RT++ + L GH + V P DPQVV+ S D+T++ WD+ GKTM
Sbjct: 242 AGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTM 301
Query: 337 LTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
LTHHK+SVRA ALHP E ASA ++I+ + L +G L N S++ IIN++++N++
Sbjct: 302 KVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESEKTGIINTLSINQD 361
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADK 456
VL GGDNG L F+D+KSGH +Q T GSL+ E + ++D TG RL+T EADK
Sbjct: 362 DVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADK 421
Query: 457 TIKMWREDETATPETHP-LNFKPPKDIRRF 485
+IK+W++DETAT E+ P L + P +RF
Sbjct: 422 SIKIWKQDETATKESEPGLAWNPNLSAKRF 451
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 170/370 (45%), Positives = 238/370 (64%)
Query: 120 LNNVGXXXXXXXXXXXXXXXERNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVR 179
LNN G +++ T I ++I +P+WH P+K YRVI GH GWV
Sbjct: 235 LNNFGPIIKKSDDNILSSDVLKHIKTLDIHKKIK----KPKWHFPYKLYRVILGHSGWVN 290
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
V D SN WF TGS DR IKIWD+A LKLTLTGHI +R + +S K+ Y+FS G+D
Sbjct: 291 CVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDN 350
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+VKCWDLE NKVIR YHGHLSGVYCL LHP++D+L++GGRD+V RVWDIRTK +F L+G
Sbjct: 351 RVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSG 410
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H TV S+ ++ +PQVV+GS D I+ WDL GK ++LTHHKKS+R++++HP E F
Sbjct: 411 HTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFC 470
Query: 360 SASAENIKKFNLPKGEFLHNMLSQQKTIINSMAV------NEEGVLATGGDNGSLWFWDW 413
S +N+K + EF N ++ +IIN + N+ +L G +NG L F+DW
Sbjct: 471 SCGTDNVKVWCGADAEFDRN-ITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDW 529
Query: 414 KSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATPETHP 473
SG+ + V PG+++ E ++++D + SRL+T DK+IK+W+E+E ATPE P
Sbjct: 530 SSGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIWKENEDATPENFP 589
Query: 474 LNFKPPKDIR 483
+ + P ++ +
Sbjct: 590 IKWNPYENFK 599
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 170/370 (45%), Positives = 238/370 (64%)
Query: 120 LNNVGXXXXXXXXXXXXXXXERNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVR 179
LNN G +++ T I ++I +P+WH P+K YRVI GH GWV
Sbjct: 235 LNNFGPIIKKSDDNILSSDVLKHIKTLDIHKKIK----KPKWHFPYKLYRVILGHSGWVN 290
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
V D SN WF TGS DR IKIWD+A LKLTLTGHI +R + +S K+ Y+FS G+D
Sbjct: 291 CVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDN 350
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+VKCWDLE NKVIR YHGHLSGVYCL LHP++D+L++GGRD+V RVWDIRTK +F L+G
Sbjct: 351 RVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSG 410
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H TV S+ ++ +PQVV+GS D I+ WDL GK ++LTHHKKS+R++++HP E F
Sbjct: 411 HTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFC 470
Query: 360 SASAENIKKFNLPKGEFLHNMLSQQKTIINSMAV------NEEGVLATGGDNGSLWFWDW 413
S +N+K + EF N ++ +IIN + N+ +L G +NG L F+DW
Sbjct: 471 SCGTDNVKVWCGADAEFDRN-ITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDW 529
Query: 414 KSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATPETHP 473
SG+ + V PG+++ E ++++D + SRL+T DK+IK+W+E+E ATPE P
Sbjct: 530 SSGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIWKENEDATPENFP 589
Query: 474 LNFKPPKDIR 483
+ + P ++ +
Sbjct: 590 IKWNPYENFK 599
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 142/316 (44%), Positives = 204/316 (64%)
Query: 163 APWKCYRVISG-HLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
A WK R ++G H GW+R++A D +N W+ TGSAD TIKIWD +LK LTGH+ +
Sbjct: 72 AEWKLLRTLAGAHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGI 131
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV-----IRSYHGHLSGVYCLGLHPTIDILL 275
R L +S +H Y+FS G+DK ++CWDLE++ IRSYHGHL GVY +GLHP +D+L
Sbjct: 132 RSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLF 191
Query: 276 TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKT 335
+GG+D V RVWDIR++++ L GH N + S+ T DPQV+T S D TI+ WDLR KT
Sbjct: 192 SGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKT 251
Query: 336 MLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKT-------- 386
L +T+H KS+R+M HP E F S + IK++ LPKGE L+ + Q +
Sbjct: 252 ELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDNSR 311
Query: 387 IINSMAVNE-EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
IIN++A+N L +G D+G L F+++ +G+ Q Q+ G ++ IYA ++D++
Sbjct: 312 IINTLAINPVTNTLFSGYDDGKLEFYNYTTGNLQQSGQSPSLAGP--EQSAIYASTFDMS 369
Query: 446 GSRLVTCEADKTIKMW 461
G RL+TC DK+I++W
Sbjct: 370 GLRLLTCHGDKSIRIW 385
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 142/316 (44%), Positives = 204/316 (64%)
Query: 163 APWKCYRVISG-HLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
A WK R ++G H GW+R++A D +N W+ TGSAD TIKIWD +LK LTGH+ +
Sbjct: 72 AEWKLLRTLAGAHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGI 131
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV-----IRSYHGHLSGVYCLGLHPTIDILL 275
R L +S +H Y+FS G+DK ++CWDLE++ IRSYHGHL GVY +GLHP +D+L
Sbjct: 132 RSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLF 191
Query: 276 TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKT 335
+GG+D V RVWDIR++++ L GH N + S+ T DPQV+T S D TI+ WDLR KT
Sbjct: 192 SGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKT 251
Query: 336 MLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKT-------- 386
L +T+H KS+R+M HP E F S + IK++ LPKGE L+ + Q +
Sbjct: 252 ELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDNSR 311
Query: 387 IINSMAVNE-EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
IIN++A+N L +G D+G L F+++ +G+ Q Q+ G ++ IYA ++D++
Sbjct: 312 IINTLAINPVTNTLFSGYDDGKLEFYNYTTGNLQQSGQSPSLAGP--EQSAIYASTFDMS 369
Query: 446 GSRLVTCEADKTIKMW 461
G RL+TC DK+I++W
Sbjct: 370 GLRLLTCHGDKSIRIW 385
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 86/298 (28%), Positives = 149/298 (50%)
Query: 168 YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSS 227
+R + H+ + +VAF+ S + F TGS DRT KIWD A G TL GH V +A ++
Sbjct: 85 FRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 228 KHTYMFSAGD-DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
+ + G DK K W E K ++ GH + + CL +P ++ TG D+ ++W
Sbjct: 145 PYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW 204
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSV 346
D+ + ++ LAGH + S+ T ++VTGS D T WD+ G+ + L+ H+ +
Sbjct: 205 DVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEI 264
Query: 347 RAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGD 404
+ + A+AS + + K ++ G+ L +L +++ + N G ++AT
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLD-VCFNYTGQLIATASA 323
Query: 405 NGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+G+ + S FQ + Q L+ G I + ++ GSR++T DKT ++W
Sbjct: 324 DGTSRVF---STDTFQ---CLCQ---LEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 276 (102.2 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 79/295 (26%), Positives = 131/295 (44%)
Query: 171 ISGHLGWVRSVAFDHS-NTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH V ++AF++ TGS D+T K+W G T GH ++ LA + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQS 189
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
T + + D K WD+E + + + GH + + L + T D L+TG D +WD+
Sbjct: 190 TLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVP 249
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ ++ L+GH + V + T S D + K WD G+ + TL H V +
Sbjct: 250 SGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDV 309
Query: 350 ALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDNG 406
+ T A+ASA+ + F+ + L L K I+ + N +G VL D
Sbjct: 310 CFNYTGQLIATASADGTSRVFSTDTFQCLCQ-LEGHKGEISKVCFNAQGSRVLTASVDKT 368
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
S W K+G Q V G D I++ +++ G ++T D T ++W
Sbjct: 369 SR-VWCVKTGACLQ-----VLEGHSDE---IFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 241 (89.9 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 62/253 (24%), Positives = 101/253 (39%)
Query: 161 WHAPW-KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC+ GH + +AF+ +T TGS D T K+WDV G TL GH +
Sbjct: 162 WSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAE 221
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
+ L ++ + + D WD+ + + GH + C+ + ++ T
Sbjct: 222 IISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASL 281
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D C+VWD + L GH++ V V T + T S D T + + + + L
Sbjct: 282 DKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQL 341
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-V 398
HK + + + +AS + + K +L I S A N EG
Sbjct: 342 EGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDT 401
Query: 399 LATGGDNGSLWFW 411
+ TG + + W
Sbjct: 402 IITGSKDNTCRIW 414
Score = 236 (88.1 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 69/266 (25%), Positives = 119/266 (44%)
Query: 203 DVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGV 262
D K L L HI + +A + + + D+ K WD + + + GH + V
Sbjct: 78 DERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVV 137
Query: 263 YCLGLH-PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHD-NTVCSVFTRPTDPQVVTGS 320
Y + + P D + TG D C++W T + GH VC F P V TGS
Sbjct: 138 YAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFN-PQSTLVATGS 196
Query: 321 HDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIK-KFNLPKGEFLHN 379
D+T K WD+ G+ + TL H + ++ + T D + S ++ +++P G +H
Sbjct: 197 MDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH- 255
Query: 380 MLSQQKTIINSMAVNEE-GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIY 438
+LS + I+ + N + ++AT + S WD + G Q T++ G D +
Sbjct: 256 VLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG---QCLATLL--GHNDE---VL 307
Query: 439 ALSYDVTGSRLVTCEADKTIKMWRED 464
+ ++ TG + T AD T +++ D
Sbjct: 308 DVCFNYTGQLIATASADGTSRVFSTD 333
Score = 201 (75.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 59/227 (25%), Positives = 95/227 (41%)
Query: 240 QVKCWDLEQNK--VIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFAL 297
Q K ++ K + R+ H+ + + + + +TG D C++WD + ++ L
Sbjct: 71 QEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTL 130
Query: 298 AGHDNTVCSV-FTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTED 356
GH N V ++ F P +V TGS D T K W GK T H + +A +P
Sbjct: 131 EGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST 190
Query: 357 CFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWK 414
A+ S + K +++ GE + + II S+ N G L TG + + WD
Sbjct: 191 LVATGSMDTTAKLWDVESGEEVSTLAGHFAEII-SLCFNTTGDRLVTGSFDHTAILWDVP 249
Query: 415 SGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
SG V G E ++D S + T DK+ K+W
Sbjct: 250 SGRKVH-----VLSGHR-GEISCVQFNWDC--SLIATASLDKSCKVW 288
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 350 (128.3 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 91/304 (29%), Positives = 150/304 (49%)
Query: 161 WH-APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W+ A + + + G GWV+SVAF +GS T+K+W+ A G L TL GH +
Sbjct: 903 WNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQS 962
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR +A S + S+ D +K W+ ++ +++ GH + + P L++G
Sbjct: 963 VRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSD 1022
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D+ ++WD+ T +L H +V +V P D Q+ + S DSTIK WD G+ TL
Sbjct: 1023 DNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTL 1082
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV 398
H + VR++ P AS S + IK +N GE L L+ + ++S+A + +G
Sbjct: 1083 EGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGE-LQQTLTGRSDWVDSVAFSPDGK 1141
Query: 399 -LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKT 457
LA+G + ++ WD +G + QT+ G D I ++ + G L + D+T
Sbjct: 1142 QLASGYYDSTIKLWDSATG---ELLQTL--EGHSDR---IQSVVFSPDGKLLASGSYDQT 1193
Query: 458 IKMW 461
K+W
Sbjct: 1194 AKLW 1197
Score = 339 (124.4 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 90/313 (28%), Positives = 146/313 (46%)
Query: 161 WH-APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A + + + GH G V S+AF +GS D TI +WD A G L T GH
Sbjct: 777 WDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHS 836
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
+ +A + + SA DD +K WDL ++ ++ H V + P +L +
Sbjct: 837 IWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSL 896
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
DS +VW+ T +L G V SV P ++ +GS +T+K W+ G+ + TL
Sbjct: 897 DSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTL 956
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV 398
H +SVR++A P AS+S++ IK +N GE L I ++A + +G
Sbjct: 957 EGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE-LQQTFKGHDLWIRAVAFSPDGK 1015
Query: 399 -LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKT 457
L +G D+ ++ WD + QQ+ D ++A+++ +L + D T
Sbjct: 1016 HLVSGSDDNTIKLWDLATSE-LQQSLE-------DHSRSVHAVAFSPDDKQLASSSLDST 1067
Query: 458 IKMWREDETATPE 470
IK+W ++AT E
Sbjct: 1068 IKLW---DSATGE 1077
Score = 326 (119.8 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 93/321 (28%), Positives = 147/321 (45%)
Query: 154 SKWPR-PEWHAPWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL 211
S W + P+ W + + HLG V SV F +GS D T+KIWD A G L
Sbjct: 727 SGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQ 786
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
TL GH V LA S + S D + WD ++++++ GH ++ + P
Sbjct: 787 TLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDG 846
Query: 272 DILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L + DS ++WD+ T L H +V SV P + + S DSTIK W+
Sbjct: 847 KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 332 YGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINS 390
G+ +L V+++A P AS S +N +K +N GE L + +++ S
Sbjct: 907 TGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSV-RS 965
Query: 391 MAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRL 449
+A + +G LA+ + ++ W+ +G + QT G + I A+++ G L
Sbjct: 966 VAFSPDGKQLASSSSDTTIKLWNSTTG---ELQQTF--KGH---DLWIRAVAFSPDGKHL 1017
Query: 450 VTCEADKTIKMWREDETATPE 470
V+ D TIK+W + AT E
Sbjct: 1018 VSGSDDNTIKLW---DLATSE 1035
Score = 324 (119.1 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 89/295 (30%), Positives = 134/295 (45%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+ GH W+R+VAF +GS D TIK+WD+A L+ +L H V +A S
Sbjct: 996 QTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPD 1055
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ S+ D +K WD ++ R+ GH GV + P +L + D ++W+
Sbjct: 1056 DKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNP 1115
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
T L G + V SV P Q+ +G +DSTIK WD G+ + TL H +++
Sbjct: 1116 LTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQS 1175
Query: 349 MALHPTEDCFASASAENIKKFNLPK-GEFLHNMLSQQKTIINSMAVNEEGVLATGGDNG- 406
+ P AS S + K P GE L K + S+A + +G L G
Sbjct: 1176 VVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWV-ESVAFSPDGKLLASSSYGE 1234
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
++ WD +G + QT+ P D AG A S D G+RL + + T K+W
Sbjct: 1235 TIKLWDPVTG---ELLQTLNDP---DESAGSVAFSPD--GNRLASVDIFDT-KIW 1280
Score = 263 (97.6 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 72/251 (28%), Positives = 111/251 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ H V +VAF + + S D TIK+WD A G L+ TL GH + VR + S
Sbjct: 1040 LEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGK 1099
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ S D +K W+ ++ ++ G V + P L +G DS ++WD T
Sbjct: 1100 LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSAT 1159
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA 350
+ L GH + + SV P + +GS+D T K WD G+ + H K V ++A
Sbjct: 1160 GELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVA 1219
Query: 351 LHPTEDCFASAS-AENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLW 409
P AS+S E IK ++ GE L + ++ S+A + +G D
Sbjct: 1220 FSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESA-GSVAFSPDGNRLASVDIFDTK 1278
Query: 410 FWDWKSGHNFQ 420
WD +G Q
Sbjct: 1279 IWDPATGELLQ 1289
Score = 251 (93.4 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 67/230 (29%), Positives = 103/230 (44%)
Query: 161 WH-APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A + R + GH VRSV F + S D TIK+W+ G L+ TLTG +
Sbjct: 1071 WDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDW 1130
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V +A S + S D +K WD +++++ GH + + P +L +G
Sbjct: 1131 VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSY 1190
Query: 280 DSVCRVWDIRTK--MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D ++WD T +QIF GH V SV P + + S+ TIK WD G+ +
Sbjct: 1191 DQTAKLWDPATGELLQIFE--GHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQ 1248
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTI 387
TL +S ++A P + AS + K ++ GE L + K +
Sbjct: 1249 TLNDPDESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQALKGHSKWV 1298
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 37/147 (25%), Positives = 63/147 (42%)
Query: 161 WH-APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A + + + GH ++SV F +GS D+T K+WD A G L GH +
Sbjct: 1155 WDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKW 1214
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V +A S + S+ + +K WD +++++ + + P + L +
Sbjct: 1215 VESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDI 1274
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS 306
++WD T + AL GH V S
Sbjct: 1275 FDT-KIWDPATGELLQALKGHSKWVWS 1300
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 81/325 (24%), Positives = 158/325 (48%)
Query: 141 RNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIK 200
R+ +++R+ +K + H + ++V+ H+ + +VA + S + F TGS DRT K
Sbjct: 59 RSDQVKLLIQRLQNKLGQHSNHK-FYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCK 117
Query: 201 IWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD-DKQVKCWDLEQNKVIRSYHGHL 259
+WD A G TL GH V +A ++ + + G DK K W +E K ++ GH
Sbjct: 118 LWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 177
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTG 319
+ + CL +P ++ TG D+ ++WDI++ ++F L GH + S+ + +++TG
Sbjct: 178 AEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITG 237
Query: 320 SHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDC---FASASAENIKKFNLPKGEF 376
S D T+ W+ G+ + TL H + + + DC + + K ++ G+
Sbjct: 238 SFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN--WDCSLILTGSMDKTCKLWDAVNGKC 295
Query: 377 LHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAG 436
+ + I++S ++AT +G+ + + ++ T ++ E
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT----RECVTKLE----GHEGE 347
Query: 437 IYALSYDVTGSRLVTCEADKTIKMW 461
I +S++ G+RL+T +DKT ++W
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIW 372
Score = 297 (109.6 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 78/295 (26%), Positives = 136/295 (46%)
Query: 171 ISGHLGWVRSVAFDHS-NTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH V ++AF++ TGS D+T K+W V G T GH ++ L+ + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
T + + D K WD++ + + + GH + + L + + + ++TG D VW+
Sbjct: 190 TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T +++ L GH + S ++TGS D T K WD GK + TLT H +
Sbjct: 250 TGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDS 309
Query: 350 ALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGS 407
T A+ASA+ + F+ E + L + I+ ++ N +G L TG + +
Sbjct: 310 CFDYTGKLIATASADGTARIFSAATRECV-TKLEGHEGEISKISFNPQGNRLLTGSSDKT 368
Query: 408 LWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
WD ++G Q V G D I++ +++ G ++T D T ++WR
Sbjct: 369 ARIWDAQTGQCLQ-----VLEGHTDE---IFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 254 (94.5 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 58/248 (23%), Positives = 111/248 (44%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
KCY GH + ++F+ +T TGS D T K+WD+ G TLTGH ++ L+
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSF 227
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
++ + + D V W+ + + + + GH + + + ++LTG D C++
Sbjct: 228 NTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKL 287
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD + L GHD+ + T + T S D T + + + + L H+
Sbjct: 288 WDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGE 347
Query: 346 VRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
+ ++ +P + + S++ + ++ G+ L +L I S A N +G ++ TG
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQ-VLEGHTDEIFSCAFNYKGDIIITGS 406
Query: 404 DNGSLWFW 411
+ + W
Sbjct: 407 KDNTCRIW 414
Score = 163 (62.4 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 49/178 (27%), Positives = 85/178 (47%)
Query: 291 KMQIF-ALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
K +F L H + +V + +TGS+D T K WD G+ + TL H+ V A+
Sbjct: 81 KFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAI 140
Query: 350 ALH-PTEDCFASASAENI-KKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL-ATGGDNG 406
A + P D A+ S + K +++ G+ H I+ ++ N + L ATG +
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIV-CLSFNPQSTLVATGSMDT 199
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
+ WD +SG ++ T+ A I +LS++ +G+R++T D T+ +W D
Sbjct: 200 TAKLWDIQSG---EEVFTLT-----GHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 81/326 (24%), Positives = 152/326 (46%)
Query: 141 RNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIK 200
R +++R+ K + H + ++V+ H+ + +VA + S + F TGS DRT K
Sbjct: 59 RTEQVKLLIQRLQEKLGQNSNHT-FYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCK 117
Query: 201 IWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD-DKQVKCWDLEQNKVIRSYHGHL 259
+WD A G TL GH V +A ++ + + G DK K W +E K ++ GH
Sbjct: 118 LWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 177
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTG 319
+ + CL +P ++ TG D+ ++WDI+ +++ L GH + S+ + +++TG
Sbjct: 178 AEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITG 237
Query: 320 SHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDC---FASASAENIKKFNLPKGEF 376
S D T+ WD G+ + L H + + + + DC + + K ++ G+
Sbjct: 238 SFDHTVVVWDADTGRKVNILIGHCAEISSASFN--WDCSLILTGSMDKTCKLWDATNGKC 295
Query: 377 LHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAG 436
+ + I++S ++AT +G+ + A T L+ G
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFS---------AATRKCIAKLEGHEG 346
Query: 437 -IYALSYDVTGSRLVTCEADKTIKMW 461
I +S++ G+ L+T +DKT ++W
Sbjct: 347 EISKISFNPQGNHLLTGSSDKTARIW 372
Score = 297 (109.6 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 78/295 (26%), Positives = 136/295 (46%)
Query: 171 ISGHLGWVRSVAFDHS-NTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH V ++AF++ TGS D+T K+W V G T GH ++ L+ + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
T + + D K WD++ + + + GH + + L + + D ++TG D VWD
Sbjct: 190 TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T ++ L GH + S ++TGS D T K WD GK + TLT H +
Sbjct: 250 TGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDS 309
Query: 350 ALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGS 407
T A+ASA+ + F+ + + + + I + ++ N +G L TG + +
Sbjct: 310 CFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEI-SKISFNPQGNHLLTGSSDKT 368
Query: 408 LWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
WD ++G Q V G D I++ +++ G+ ++T D T ++WR
Sbjct: 369 ARIWDAQTGQCLQ-----VLEGHTDE---IFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 256 (95.2 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 59/248 (23%), Positives = 109/248 (43%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
KCY GH + ++F+ +T TGS D T K+WD+ G TL GH ++ L+
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
++ + + D V WD + + + GH + + + ++LTG D C++
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKL 287
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD + L GHD+ + T + T S D T + + K + L H+
Sbjct: 288 WDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGE 347
Query: 346 VRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
+ ++ +P + + S++ + ++ G+ L +L I S A N +G ++ TG
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQ-VLEGHTDEIFSCAFNYKGNIVITGS 406
Query: 404 DNGSLWFW 411
+ + W
Sbjct: 407 KDNTCRIW 414
Score = 153 (58.9 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 43/151 (28%), Positives = 75/151 (49%)
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALH-PTEDCFASASAENI-KKFNLPKG 374
+TGS+D T K WD G+ + TL H+ V A+A + P D A+ S + K +++ G
Sbjct: 108 ITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 375 EFLHNMLSQQKTIINSMAVNEEGVL-ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDS 433
+ H I+ ++ N + L ATG + + WD ++G ++ T+
Sbjct: 168 KCYHTFRGHTAEIV-CLSFNPQSTLVATGSMDTTAKLWDIQNG---EEVYTL-----RGH 218
Query: 434 EAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
A I +LS++ +G R++T D T+ +W D
Sbjct: 219 SAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/301 (25%), Positives = 145/301 (48%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V SV F + W + SAD+ IKIW G + T++GH + +A SS
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+ K +++ GH + V+C +P +++++G D R+WD++T
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 134
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS-VRAM 349
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 135 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 194
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ KG+ L +++ I + +V + +G ++
Sbjct: 195 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 254
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC--EADKTIKMWRE 463
++ W+ ++ Q+ Q G D + + + T + + + E DKTIK+W+
Sbjct: 255 NLVYIWNLQTKEIVQKLQ-----GHTDV---VISTACHPTENIIASAALENDKTIKLWKS 306
Query: 464 D 464
D
Sbjct: 307 D 307
Score = 245 (91.3 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 64/258 (24%), Positives = 120/258 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
++L++ D ++WD+ + + L GH N V C F P +V+GS D +++
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRI 129
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKT 386
WD++ GK + TL H V A+ + S+S + + + ++ G+ L ++
Sbjct: 130 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 189
Query: 387 IINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
++ + + G +LA DN +L WD+ G + G + + I+A ++ V
Sbjct: 190 PVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLK-----TYTGHKNEKYCIFA-NFSV 242
Query: 445 TGSR-LVTCEADKTIKMW 461
TG + +V+ D + +W
Sbjct: 243 TGGKWIVSGSEDNLVYIW 260
Score = 242 (90.2 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 65/261 (24%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K + ISGH + VA+ + + S D+T+KIWDV+ G TL GH
Sbjct: 46 WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 105
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + + S D+ V+ WD++ K +++ H V + + ++++
Sbjct: 106 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 165
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + L DN S V P ++ + D+T+K WD GK + T
Sbjct: 166 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 225
Query: 339 LTHHKKSVRAMALHPTED---CFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + + S S +N+ +NL E + + +I++
Sbjct: 226 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 285
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
E ++A+ WKS
Sbjct: 286 TENIIASAALENDKTIKLWKS 306
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/301 (25%), Positives = 145/301 (48%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V SV F + W + SAD+ IKIW G + T++GH + +A SS
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+ K +++ GH + V+C +P +++++G D R+WD++T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS-VRAM 349
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ KG+ L +++ I + +V + +G ++
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC--EADKTIKMWRE 463
++ W+ ++ Q+ Q G D + + + T + + + E DKTIK+W+
Sbjct: 281 NLVYIWNLQTKEIVQKLQ-----GHTDV---VISTACHPTENIIASAALENDKTIKLWKS 332
Query: 464 D 464
D
Sbjct: 333 D 333
Score = 245 (91.3 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 64/258 (24%), Positives = 120/258 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
++L++ D ++WD+ + + L GH N V C F P +V+GS D +++
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRI 155
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKT 386
WD++ GK + TL H V A+ + S+S + + + ++ G+ L ++
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 387 IINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
++ + + G +LA DN +L WD+ G + G + + I+A ++ V
Sbjct: 216 PVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLK-----TYTGHKNEKYCIFA-NFSV 268
Query: 445 TGSR-LVTCEADKTIKMW 461
TG + +V+ D + +W
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 242 (90.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 65/261 (24%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K + ISGH + VA+ + + S D+T+KIWDV+ G TL GH
Sbjct: 72 WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + + S D+ V+ WD++ K +++ H V + + ++++
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + L DN S V P ++ + D+T+K WD GK + T
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 339 LTHHKKSVRAMALHPTED---CFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + + S S +N+ +NL E + + +I++
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
E ++A+ WKS
Sbjct: 312 TENIIASAALENDKTIKLWKS 332
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/301 (25%), Positives = 145/301 (48%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V SV F + W + SAD+ IKIW G + T++GH + +A SS
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+ K +++ GH + V+C +P +++++G D R+WD++T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS-VRAM 349
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ KG+ L +++ I + +V + +G ++
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC--EADKTIKMWRE 463
++ W+ ++ Q+ Q G D + + + T + + + E DKTIK+W+
Sbjct: 281 NLVYIWNLQTKEIVQKLQ-----GHTDV---VISTACHPTENIIASAALENDKTIKLWKS 332
Query: 464 D 464
D
Sbjct: 333 D 333
Score = 245 (91.3 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 64/258 (24%), Positives = 120/258 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
++L++ D ++WD+ + + L GH N V C F P +V+GS D +++
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRI 155
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKT 386
WD++ GK + TL H V A+ + S+S + + + ++ G+ L ++
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 387 IINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
++ + + G +LA DN +L WD+ G + G + + I+A ++ V
Sbjct: 216 PVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLK-----TYTGHKNEKYCIFA-NFSV 268
Query: 445 TGSR-LVTCEADKTIKMW 461
TG + +V+ D + +W
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 242 (90.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 65/261 (24%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K + ISGH + VA+ + + S D+T+KIWDV+ G TL GH
Sbjct: 72 WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + + S D+ V+ WD++ K +++ H V + + ++++
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + L DN S V P ++ + D+T+K WD GK + T
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 339 LTHHKKSVRAMALHPTED---CFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + + S S +N+ +NL E + + +I++
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
E ++A+ WKS
Sbjct: 312 TENIIASAALENDKTIKLWKS 332
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/301 (25%), Positives = 145/301 (48%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V SV F + W + SAD+ IKIW G + T++GH + +A SS
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+ K +++ GH + V+C +P +++++G D R+WD++T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS-VRAM 349
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ KG+ L +++ I + +V + +G ++
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC--EADKTIKMWRE 463
++ W+ ++ Q+ Q G D + + + T + + + E DKTIK+W+
Sbjct: 281 NLVYIWNLQTKEIVQKLQ-----GHTDV---VISTACHPTENIIASAALENDKTIKLWKS 332
Query: 464 D 464
D
Sbjct: 333 D 333
Score = 245 (91.3 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 64/258 (24%), Positives = 120/258 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
++L++ D ++WD+ + + L GH N V C F P +V+GS D +++
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRI 155
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKT 386
WD++ GK + TL H V A+ + S+S + + + ++ G+ L ++
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 387 IINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
++ + + G +LA DN +L WD+ G + G + + I+A ++ V
Sbjct: 216 PVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLK-----TYTGHKNEKYCIFA-NFSV 268
Query: 445 TGSR-LVTCEADKTIKMW 461
TG + +V+ D + +W
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 242 (90.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 65/261 (24%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K + ISGH + VA+ + + S D+T+KIWDV+ G TL GH
Sbjct: 72 WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + + S D+ V+ WD++ K +++ H V + + ++++
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + L DN S V P ++ + D+T+K WD GK + T
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 339 LTHHKKSVRAMALHPTED---CFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + + S S +N+ +NL E + + +I++
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
E ++A+ WKS
Sbjct: 312 TENIIASAALENDKTIKLWKS 332
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/301 (25%), Positives = 145/301 (48%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V SV F + W + SAD+ IKIW G + T++GH + +A SS
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+ K +++ GH + V+C +P +++++G D R+WD++T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS-VRAM 349
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ KG+ L +++ I + +V + +G ++
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC--EADKTIKMWRE 463
++ W+ ++ Q+ Q G D + + + T + + + E DKTIK+W+
Sbjct: 281 NLVYIWNLQTKEIVQKLQ-----GHTDV---VISTACHPTENIIASAALENDKTIKLWKS 332
Query: 464 D 464
D
Sbjct: 333 D 333
Score = 245 (91.3 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 64/258 (24%), Positives = 120/258 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
++L++ D ++WD+ + + L GH N V C F P +V+GS D +++
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRI 155
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKT 386
WD++ GK + TL H V A+ + S+S + + + ++ G+ L ++
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 387 IINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
++ + + G +LA DN +L WD+ G + G + + I+A ++ V
Sbjct: 216 PVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLK-----TYTGHKNEKYCIFA-NFSV 268
Query: 445 TGSR-LVTCEADKTIKMW 461
TG + +V+ D + +W
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 242 (90.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 65/261 (24%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K + ISGH + VA+ + + S D+T+KIWDV+ G TL GH
Sbjct: 72 WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + + S D+ V+ WD++ K +++ H V + + ++++
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + L DN S V P ++ + D+T+K WD GK + T
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 339 LTHHKKSVRAMALHPTED---CFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + + S S +N+ +NL E + + +I++
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
E ++A+ WKS
Sbjct: 312 TENIIASAALENDKTIKLWKS 332
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/301 (25%), Positives = 145/301 (48%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V SV F + W + SAD+ IKIW G + T++GH + +A SS
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+ K +++ GH + V+C +P +++++G D R+WD++T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS-VRAM 349
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ KG+ L +++ I + +V + +G ++
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC--EADKTIKMWRE 463
++ W+ ++ Q+ Q G D + + + T + + + E DKTIK+W+
Sbjct: 281 NLVYIWNLQTKEIVQKLQ-----GHTDV---VISTACHPTENIIASAALENDKTIKLWKS 332
Query: 464 D 464
D
Sbjct: 333 D 333
Score = 245 (91.3 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 64/258 (24%), Positives = 120/258 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
++L++ D ++WD+ + + L GH N V C F P +V+GS D +++
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRI 155
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKT 386
WD++ GK + TL H V A+ + S+S + + + ++ G+ L ++
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 387 IINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
++ + + G +LA DN +L WD+ G + G + + I+A ++ V
Sbjct: 216 PVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLK-----TYTGHKNEKYCIFA-NFSV 268
Query: 445 TGSR-LVTCEADKTIKMW 461
TG + +V+ D + +W
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 242 (90.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 65/261 (24%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K + ISGH + VA+ + + S D+T+KIWDV+ G TL GH
Sbjct: 72 WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + + S D+ V+ WD++ K +++ H V + + ++++
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + L DN S V P ++ + D+T+K WD GK + T
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 339 LTHHKKSVRAMALHPTED---CFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + + S S +N+ +NL E + + +I++
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
E ++A+ WKS
Sbjct: 312 TENIIASAALENDKTIKLWKS 332
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/301 (25%), Positives = 145/301 (48%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V SV F + W + SAD+ IKIW G + T++GH + +A SS
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+ K +++ GH + V+C +P +++++G D R+WD++T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS-VRAM 349
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ KG+ L +++ I + +V + +G ++
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC--EADKTIKMWRE 463
++ W+ ++ Q+ Q G D + + + T + + + E DKTIK+W+
Sbjct: 281 NLVYIWNLQTKEVVQKLQ-----GHTDV---VISTACHPTENIIASAALENDKTIKLWKS 332
Query: 464 D 464
D
Sbjct: 333 D 333
Score = 243 (90.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 65/259 (25%), Positives = 122/259 (47%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGL 267
TLK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +
Sbjct: 36 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 268 HPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIK 326
++L++ D ++WD+ + + L GH N V C F P +V+GS D +++
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVR 154
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQK 385
WD++ GK + TL H V A+ + S+S + + + ++ G+ L ++
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ + + G +LA DN +L WD+ G + T + + + I+A ++
Sbjct: 215 PPVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLK-TYTCHK----NEKYCIFA-NFS 267
Query: 444 VTGSR-LVTCEADKTIKMW 461
VTG + +V+ D + +W
Sbjct: 268 VTGGKWIVSGSEDNLVYIW 286
Score = 240 (89.5 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 65/261 (24%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K + ISGH + VA+ + + S D+T+KIWDV+ G TL GH
Sbjct: 72 WGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 131
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + + S D+ V+ WD++ K +++ H V + + ++++
Sbjct: 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + L DN S V P ++ + D+T+K WD GK + T
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 339 LTHHKKSVRAMALHPTED---CFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + + S S +N+ +NL E + + +I++
Sbjct: 252 YTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHP 311
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
E ++A+ WKS
Sbjct: 312 TENIIASAALENDKTIKLWKS 332
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 78/301 (25%), Positives = 144/301 (47%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V +V F + W + SAD+ IKIW G + T++GH + +A SS
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 127
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ S DDK +K W+L K +++ GH + V+C +P +++++G D R+WD+RT
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 187
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS-VRAM 349
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 188 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 247
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ KG+ L +++ I + +V + +G ++
Sbjct: 248 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 307
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTC--EADKTIKMWRE 463
++ W+ +S Q+ Q G D+ + + T + + + E DKTIK+W+
Sbjct: 308 NMVYIWNLQSKEVVQKLQ-----GHTDT---VLCTACHPTENIIASAALENDKTIKLWKS 359
Query: 464 D 464
D
Sbjct: 360 D 360
Score = 259 (96.2 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 68/259 (26%), Positives = 121/259 (46%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGL 267
TLK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +
Sbjct: 63 TLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 122
Query: 268 HPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIK 326
+L++G D +VW++ T + L GH N V C F P +V+GS D +++
Sbjct: 123 SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVR 181
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQK 385
WD+R GK + TL H V A+ + S+S + + + ++ G+ L ++
Sbjct: 182 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 241
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ + + G +LA DN +L WD+ G + G + + I+A ++
Sbjct: 242 PPVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLK-----TYTGHKNEKYCIFA-NFS 294
Query: 444 VTGSR-LVTCEADKTIKMW 461
VTG + +V+ D + +W
Sbjct: 295 VTGGKWIVSGSEDNMVYIW 313
Score = 235 (87.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 63/261 (24%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K + ISGH + VA+ + +GS D+T+K+W+++ G TL GH
Sbjct: 99 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNY 158
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + + S D+ V+ WD+ K +++ H V + + ++++
Sbjct: 159 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 218
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + L DN S V P ++ + D+T+K WD GK + T
Sbjct: 219 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 278
Query: 339 LTHHKKSVRAMALHPTED---CFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + + S S +N + +NL E + + T++ +
Sbjct: 279 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHP 338
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
E ++A+ WKS
Sbjct: 339 TENIIASAALENDKTIKLWKS 359
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 83/326 (25%), Positives = 154/326 (47%)
Query: 141 RNLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIK 200
R +++R+ K R + ++V+ H+ + +VA + + + F TGS DRT K
Sbjct: 59 RTKQVRLLVQRLQEKL-RQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCK 117
Query: 201 IWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD-DKQVKCWDLEQNKVIRSYHGHL 259
+WD A G TL GH V +A ++ + + G DK K W E K ++ GH
Sbjct: 118 VWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHT 177
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTG 319
+ + CL +P ++ TG D+ ++WDI++ ++ L GH + S+ + +++TG
Sbjct: 178 AEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITG 237
Query: 320 SHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDC---FASASAENIKKFNLPKGEF 376
S D T+ WD G+ + TL H + + AL + DC + + ++ G+
Sbjct: 238 SFDHTVVVWDASTGRKVHTLIGHCAEISS-ALF-SWDCSLILTGSMDKTCMLWDATSGKC 295
Query: 377 LHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAG 436
+ + I++S ++AT +G+ + N + I + L+ G
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARVY------NATTRKCITK---LEGHEG 346
Query: 437 -IYALSYDVTGSRLVTCEADKTIKMW 461
I +S++ G+RL+T +DKT ++W
Sbjct: 347 EISKISFNPQGNRLLTGSSDKTARIW 372
Score = 292 (107.8 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 77/295 (26%), Positives = 134/295 (45%)
Query: 171 ISGHLGWVRSVAFDHS-NTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH V ++AF++ TGS D+T K+W G T GH ++ L+ + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
T + + D K WD++ + + + GHL+ + L + D ++TG D VWD
Sbjct: 190 TVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAS 249
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T ++ L GH + S ++TGS D T WD GK + TLT H +
Sbjct: 250 TGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDS 309
Query: 350 ALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGS 407
T A+ASA+ + +N + + L + I+ ++ N +G L TG + +
Sbjct: 310 CFDYTGKLIATASADGTARVYNATTRKCI-TKLEGHEGEISKISFNPQGNRLLTGSSDKT 368
Query: 408 LWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
WD ++G Q V G D I++ +++ G+ ++T D + ++WR
Sbjct: 369 ARIWDVQTGQCLQ-----VLEGHTDE---IFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 267 (99.0 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 63/254 (24%), Positives = 114/254 (44%)
Query: 161 WHAPW-KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KCY GH + ++F+ +T TGS D T K+WD+ G +TLTGH+ +
Sbjct: 162 WSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAE 221
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
+ L+ + + + D V WD + + + GH + + ++LTG
Sbjct: 222 IISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSM 281
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D C +WD + + L GHD+ + T + T S D T + ++ K + L
Sbjct: 282 DKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKL 341
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEG- 397
H+ + ++ +P + + S++ + +++ G+ L +L I S A N +G
Sbjct: 342 EGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQ-VLEGHTDEIFSCAFNYKGN 400
Query: 398 VLATGGDNGSLWFW 411
++ TG + S W
Sbjct: 401 IVITGSKDNSCRIW 414
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 313 (115.2 bits), Expect = 5.4e-28, P = 5.4e-28
Identities = 75/301 (24%), Positives = 141/301 (46%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH + SV F + W + +AD I IW G K TL GH ++ +A SS +
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+ K +++ GH V+C +P +++++G D ++W+++T
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH-KKSVRAM 349
+ L+ H + + +V +V+GS+D + WD G+ + TL V +
Sbjct: 155 GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFV 214
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQKTIINSMAVNEEGVLATGGDN 405
P +A+ +N +K ++ +G L +++ + S +V + +G ++
Sbjct: 215 KFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSED 274
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDS--EAGIYALSYDVTGSRLVTCEADKTIKMWRE 463
++ W+ ++ Q+ Q G D A + + + L E DKTIK+W
Sbjct: 275 NMVYIWNLQTKEIVQRLQ-----GHTDVVISAACHPTKNIIASAAL---ENDKTIKVWSS 326
Query: 464 D 464
D
Sbjct: 327 D 327
Score = 234 (87.4 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 60/261 (22%), Positives = 113/261 (43%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A C + + GH + VA+ ++ + S D+T+K+WD+ G TL GH +
Sbjct: 66 WGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDF 125
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + S D+ VK W+++ K +++ H + + + ++++G
Sbjct: 126 VFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSY 185
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +CR+WD + + LA N S V P ++T + D+T+K WD G+ + T
Sbjct: 186 DGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKT 245
Query: 339 LTHHKKSVRAM--ALHPT-EDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVN 394
T HK + + T S S +N + +NL E + + +I++
Sbjct: 246 YTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHP 305
Query: 395 EEGVLATGGDNGSLWFWDWKS 415
+ ++A+ W S
Sbjct: 306 TKNIIASAALENDKTIKVWSS 326
Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 58/258 (22%), Positives = 117/258 (45%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
L+LTL GH + + S ++ S+ D + W ++ +GH + +
Sbjct: 31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS 90
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
L++ D +VWD+R+ + L GH + V C F P++ +V+GS D ++K
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSN-LIVSGSFDESVKI 149
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKT 386
W+++ GK + TL+ H + A+ + S S + + + ++ G+ L + +
Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209
Query: 387 IINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
++ + + G +L DN +L WD+ G + G + + ++A S+ V
Sbjct: 210 PVSFVKFSPNGKYILTATLDN-TLKLWDYSRGRCLK-----TYTGHKNEKYCLFA-SFSV 262
Query: 445 TGSR-LVTCEADKTIKMW 461
TG + +V+ D + +W
Sbjct: 263 TGRKWVVSGSEDNMVYIW 280
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 308 (113.5 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 81/309 (26%), Positives = 150/309 (48%)
Query: 163 APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
A +K I GH + +V F + T SAD+T+KIW+++ + + TLTGH V
Sbjct: 67 AGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVND 126
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
A S+ + +A DDK +K +++ K+ ++ GH + V+C +P ++++G D
Sbjct: 127 FAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDES 186
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSV-FTRPTDPQVVT-GSHDSTIKFWDLRYGKTMLTLT 340
R+WD+RT M + L H + V +V F R D ++T GS+D ++ WD G+ + TL
Sbjct: 187 VRIWDVRTGMCVKTLPAHSDPVSAVSFNR--DGSLITSGSYDGLVRIWDTANGQCVKTLV 244
Query: 341 HHKKS-VRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKT---IINSMAVNE 395
+ V + P S++ +N +K ++ KG+ L + I + +V
Sbjct: 245 DDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTG 304
Query: 396 EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
+ +G ++ ++ W+ ++ Q + Q + S+ + + + L E D
Sbjct: 305 GKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQ-AVIASDC--HPMQNMIASGAL---EPD 358
Query: 456 KTIKMWRED 464
TI++WR D
Sbjct: 359 NTIRIWRSD 367
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 325 (119.5 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 77/259 (29%), Positives = 125/259 (48%)
Query: 165 WKCYRVISGHLGWVRSVAFDHSN-TWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S+ TG D + IW V+K ++LTGH V +
Sbjct: 11 WKLQEIVA-HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCI 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+S + + ++ WDLE K++R+ GH + + L HP + L +G DS
Sbjct: 70 QFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WD+R K +F GH V C F+ P + + S DST+K WDL GK + T H
Sbjct: 130 KLWDVRRKGCVFRYKGHTQAVRCLAFS-PDGKWLASASDDSTVKLWDLIAGKMITEFTSH 188
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKT-IINSMAVNEEGVLA 400
+V + HP E AS SA+ +K ++L K + + S+ +T ++ S+ N +G
Sbjct: 189 TSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGS--SEGETGVVRSVLFNPDGSCL 246
Query: 401 TGGDNGSLWFWDWKSGHNF 419
G +L + W+ F
Sbjct: 247 YSGSENTLRVYGWEPDRCF 265
Score = 187 (70.9 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 55/207 (26%), Positives = 97/207 (46%)
Query: 258 HLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L + LL TGG D +W + I +L GH + V + ++ +V
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGE 375
V GS +++ WDL K + TL HK S+ ++ HP + AS S + NIK +++ +
Sbjct: 79 VAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG 138
Query: 376 FLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSE 434
+ + + +A + +G LA+ D+ ++ WD +G + I + S S
Sbjct: 139 CVFRYKGHTQAV-RCLAFSPDGKWLASASDDSTVKLWDLIAG------KMITEFTSHTSA 191
Query: 435 AGIYALSYDVTGSRLVTCEADKTIKMW 461
+ + + L + AD+T+K+W
Sbjct: 192 VNV--VQFHPNEYLLASGSADRTVKLW 216
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 305 (112.4 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 74/298 (24%), Positives = 140/298 (46%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ GHL + SV F W + SAD+TIKIW G + TL GH E + +A S
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSK 101
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ SA DDK +K WD+E K++++ GH V+ + +P +++++G D R+WD+ T
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL-THHKKSVRAM 349
++ H + V V VV+GS+D T++ WD G+ + T+ T K V +
Sbjct: 162 GECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFV 221
Query: 350 ALHPTEDCFASASAENIKK---FNLPKG--EFLHNMLSQQKTIINSMAVNEEGVLATGGD 404
P + + +N + +N K + +++ I ++ +V + TG +
Sbjct: 222 KFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSE 281
Query: 405 NGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
+ ++ ++ ++ + QT+ + + + L E D+++K+W+
Sbjct: 282 DNLIYIYNLQTR---EIVQTLAGHEDVVLTVACHPTENIIASGAL---EKDRSVKIWK 333
Score = 246 (91.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A K R + GH + +A+ + C+ S D+TIKIWDV G + TL GH E
Sbjct: 73 WGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEY 132
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTG 277
V G++ + + + S D+ V+ WD+ + + H V G+H D ++++G
Sbjct: 133 VFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPV--TGVHFNRDGTLVVSG 190
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTM 336
D R+WD T + ++ D S V P V+ G+ D+T++ W K
Sbjct: 191 SYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKC 250
Query: 337 L-TLTHHKKSVRAMALHPTEDC---FASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSM 391
L T T HK + + C + S +N I +NL E + + + ++
Sbjct: 251 LKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVA 310
Query: 392 AVNEEGVLATG 402
E ++A+G
Sbjct: 311 CHPTENIIASG 321
Score = 213 (80.0 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 58/257 (22%), Positives = 113/257 (43%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK TL GH++ + + S ++ SA DK +K W K R+ GH G+ +
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWS 97
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
++ + D ++WD+ + + L GH V V P +V+GS D ++ W
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTI 387
D+ G+ ++ H V + + S S + ++ ++ G+ L+ + ++
Sbjct: 158 DVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKE 217
Query: 388 INSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
++ + + G VLA DN +L W + + + T G + + I++ ++ VT
Sbjct: 218 VSFVKFSPNGKFVLAGTLDN-TLRLWSYNNNKKCLKTYT----GHKNEKYCIFS-TFSVT 271
Query: 446 -GSRLVTCEADKTIKMW 461
G +VT D I ++
Sbjct: 272 CGKWIVTGSEDNLIYIY 288
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 322 (118.4 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 72/253 (28%), Positives = 119/253 (47%)
Query: 165 WKCYRVISGHLGWVRSVAFDHSN-TWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W V K ++LTGH + L
Sbjct: 11 WKLQEIVA-HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESL 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+S+K + + ++ WDLE K++R+ GH + + L HP + +G D+
Sbjct: 70 QISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WD+R K IF H V C F+ P + + + D T+K WDL GK M T H
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 343 KKSVRAMALHPTEDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
V + HP+E AS S++ +F +L K + + + ++ T + + N +G
Sbjct: 189 SGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVV-SCIEEEATPVRCILFNPDGCCLY 247
Query: 402 GGDNGSLWFWDWK 414
GG SL + W+
Sbjct: 248 GGFQDSLRVYGWE 260
Score = 222 (83.2 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 56/218 (25%), Positives = 100/218 (45%)
Query: 204 VAKGTLKLT-LTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
V K KL + H V L + S + + GDD +V W + + + S GH +
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ L + ++++ G + RVWD+ + L GH +CS+ P V +GS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNM 380
D+ IK WD+R + H ++VR + P ASA+ ++ +K ++L G+ +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 381 LSQQKTIINSMAVN-EEGVLATGGDNGSLWFWDWKSGH 417
+ N + + E +LA+G + ++ FWD + H
Sbjct: 186 TGHSGPV-NVVEFHPSEYLLASGSSDRTIRFWDLEKFH 222
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 294 (108.6 bits), Expect = 9.6e-26, P = 9.6e-26
Identities = 76/307 (24%), Positives = 145/307 (47%)
Query: 163 APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
A +K + GH + S F + T SAD+T+KIW++ + TLTGH V
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
+A SS + SA DDK +K +++ +++ ++ GH + V+C +P ++++G D
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+WD++T M I L H + V +V + +GS+D ++ WD G+ + TL
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 343 KKS-VRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKT---IINSMAVNEEG 397
+ V + P +++ ++ +K ++ KG+ L + + I + +V
Sbjct: 255 ENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK 314
Query: 398 VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKT 457
+ +G ++ ++ W+ ++ Q + QP L S+ + + + L E D
Sbjct: 315 WIISGSEDCKIYIWNLQTREIVQCLEGHTQP-VLASDC--HPVQNIIASGAL---EPDNK 368
Query: 458 IKMWRED 464
I +WR D
Sbjct: 369 IHIWRSD 375
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 294 (108.6 bits), Expect = 9.6e-26, P = 9.6e-26
Identities = 76/307 (24%), Positives = 145/307 (47%)
Query: 163 APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
A +K + GH + S F + T SAD+T+KIW++ + TLTGH V
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
+A SS + SA DDK +K +++ +++ ++ GH + V+C +P ++++G D
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+WD++T M I L H + V +V + +GS+D ++ WD G+ + TL
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 343 KKS-VRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKT---IINSMAVNEEG 397
+ V + P +++ ++ +K ++ KG+ L + + I + +V
Sbjct: 255 ENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK 314
Query: 398 VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKT 457
+ +G ++ ++ W+ ++ Q + QP L S+ + + + L E D
Sbjct: 315 WIISGSEDCKIYIWNLQTREIVQCLEGHTQP-VLASDC--HPVQNIIASGAL---EPDNK 368
Query: 458 IKMWRED 464
I +WR D
Sbjct: 369 IHIWRSD 375
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 309 (113.8 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 72/254 (28%), Positives = 119/254 (46%)
Query: 165 WKCYRVISGHLGWVRSVAFDHSN-TWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W V K ++LTGH + L
Sbjct: 11 WKLQEIVA-HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESL 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+S+K + + ++ WDLE K++R+ GH + + L HP + +G D+
Sbjct: 70 QISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WD+R K IF H V C F+ P + + + D T+K WDL GK M T H
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 343 KKSVRAMALHPT-EDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V + HP+ E AS S+ I+ ++L K + + + ++ T + + N +G
Sbjct: 189 YGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV-SCIEEEATPVRCILFNPDGCCL 247
Query: 401 TGGDNGSLWFWDWK 414
GG SL + W+
Sbjct: 248 YGGFQDSLRVYGWE 261
Score = 219 (82.2 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 55/218 (25%), Positives = 99/218 (45%)
Query: 204 VAKGTLKLT-LTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
V K KL + H V L + S + + GDD +V W + + + S GH +
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ L + ++++ G + RVWD+ + L GH +CS+ P V +GS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNM 380
D+ IK WD+R + H ++VR + P ASA+ ++ +K ++L G+ +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 381 LSQQKTI-INSMAVNEEGVLATGGDNGSLWFWDWKSGH 417
+ + + E +LA+G + ++ FWD + H
Sbjct: 186 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFH 223
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 288 (106.4 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 69/311 (22%), Positives = 140/311 (45%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVR 221
+ P++ + + GH + V F + + S D+T+ +W +L GH +
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
LA SS Y SA DD ++ WD + ++ GH + V+C+ +P +++++G D
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 281 SVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLT 340
R+W+++T + + H + SV +V+ SHD + K WD + G + TL
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Query: 341 HHKKSVRAMA-LHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTII---NSMAVNE 395
K + A P A+ ++ +K N G+FL + ++ +V
Sbjct: 210 DDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTN 269
Query: 396 EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGI--YALSYDVTGSRLVTCE 453
+ +G ++ ++ WD ++ + Q+ + G D+ + + + +++ S
Sbjct: 270 GKYIVSGSEDNCVYLWDLQARNILQRLE-----GHTDAVISVSCHPVQNEISSSGN---H 321
Query: 454 ADKTIKMWRED 464
DKTI++W++D
Sbjct: 322 LDKTIRIWKQD 332
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 307 (113.1 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 70/253 (27%), Positives = 116/253 (45%)
Query: 165 WKCYRVISGHLGWVRSVAFDHSN-TWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W V K ++LTGH + L
Sbjct: 11 WKLQEIVA-HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESL 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+S+K + + ++ WDLE K++R+ GH + + L HP + +G D+
Sbjct: 70 QISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WD+R K IF H V C F+ P + + + D T+K WDL GK M T H
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 343 KKSVRAMALHPTEDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
V + HP+E A + +F +L K + + + ++ T + + N +G
Sbjct: 189 YGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVV-SCIEEEATPVRCILFNPDGCCLY 247
Query: 402 GGDNGSLWFWDWK 414
GG SL + W+
Sbjct: 248 GGFQDSLRVYGWE 260
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 258 HLSGVYCLGL-HPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L T +L TGG D VW + + +L GH + S+ + +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGE 375
V GS +I+ WDL K + TL HK ++ ++ HP AS S + +IK +++ +
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 376 FLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSG 416
+ S + + + + +G LA+ D+ ++ WD +G
Sbjct: 139 CIFKYKSHTQAV-RCLRFSPDGKWLASAADDHTVKLWDLTAG 179
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 301 (111.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 76/274 (27%), Positives = 128/274 (46%)
Query: 158 RPEWHAPWK-CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGH 216
+P+ W C + + GH V SV++ H + + S DRT+KIWD G+L+ TL GH
Sbjct: 278 KPDVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGH 337
Query: 217 IEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
+ VR + + S + + ++ D VK WD + + GH V + +L +
Sbjct: 338 SDLVRSV-IFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLAS 396
Query: 277 GGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTM 336
DS ++WD T L GH + V SV + + S DST+K WD G
Sbjct: 397 ASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQ 456
Query: 337 LTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNE 395
TL H+ VR++ ASAS + ++ ++ KG H L +++ S++ +
Sbjct: 457 HTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHT-LEGHSSLVTSVSFSH 515
Query: 396 EG-VLATGGDNGSLWFWDWKSG---HNFQQAQTI 425
+ +LA+ ++ ++ WD ++ H F TI
Sbjct: 516 DSRLLASASNDQTVRIWDIEARSLQHTFDLDATI 549
Score = 226 (84.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 69/265 (26%), Positives = 118/265 (44%)
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID 272
L GH V ++ S + SA DD+ VK WD E + + GH V + +
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSV-IFSHDS 350
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
LL DS ++WD T L GH + V SV + + S DST+K WD
Sbjct: 351 RLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 410
Query: 333 GKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSM 391
G TL H+ VR++ ASAS ++ +K ++ G H + + + + +
Sbjct: 411 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 470
Query: 392 AVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVT 451
++ +LA+ D+ ++ WD + G + T+ SL + + S+D SRL+
Sbjct: 471 FSHDSRLLASASDDRTVRIWDTEKGSH---KHTLEGHSSLVTSV---SFSHD---SRLLA 521
Query: 452 CEA-DKTIKMWREDETATPETHPLN 475
+ D+T+++W + + T L+
Sbjct: 522 SASNDQTVRIWDIEARSLQHTFDLD 546
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 305 (112.4 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 67/224 (29%), Positives = 113/224 (50%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG D + +W + K T ++L GH V +A +S+ + + +K WDLE++K+
Sbjct: 33 TGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKM 92
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+R++ GH S + HP + L +G D+ RVWD R K I GH + ++ P
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP 152
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKF-N 370
VV+G D+ +K WDL GK + H+ +R++ HP E A+ SA+ KF +
Sbjct: 153 DGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNG-SLWFWD 412
L E + + T + ++A + +G L G D+G ++ W+
Sbjct: 213 LETFELI-GTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWE 255
Score = 249 (92.7 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 52/183 (28%), Positives = 86/183 (46%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ GH V SVAF+ G++ IK+WD+ + + TGH +
Sbjct: 54 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S D ++ WD + I++Y GH G+ + P +++GG D+V +VWD+
Sbjct: 114 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 173
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA 350
+ H+ + S+ P + + TGS D T+KFWDL + + T VRA+A
Sbjct: 174 GKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIA 233
Query: 351 LHP 353
HP
Sbjct: 234 FHP 236
Score = 208 (78.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 64/262 (24%), Positives = 116/262 (44%)
Query: 204 VAKGTLKLT-LTGHIEQVRGLAVSSKHT-YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
+AK KL H V L++ K + + + GDD +V W + + S GH S
Sbjct: 1 MAKRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSP 60
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
V + + ++L G V ++WD+ + A GH + +V P + +GS
Sbjct: 61 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNM 380
D+ ++ WD R + T H + + + P S +N+ K ++L G+ LH
Sbjct: 121 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 180
Query: 381 LSQQKTIINSMAVNE-EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYA 439
+ I S+ + E +LATG + ++ FWD ++ F+ T +P + G+ A
Sbjct: 181 KCHEGPI-RSLDFHPLEFLLATGSADRTVKFWDLET---FELIGT-TRPEA----TGVRA 231
Query: 440 LSYDVTGSRLVTCEADKTIKMW 461
+++ G L C D +K++
Sbjct: 232 IAFHPDGQTLF-CGLDDGLKVY 252
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 36/125 (28%), Positives = 55/125 (44%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K R +GH +V F + +GS+D +++WD K T GH + +
Sbjct: 91 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEF 150
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
S ++ S G D VK WDL K++ + H + L HP +L TG D +
Sbjct: 151 SPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKF 210
Query: 286 WDIRT 290
WD+ T
Sbjct: 211 WDLET 215
Score = 143 (55.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 161 WHAPWK-CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W K C + GH + ++ F W +G D +K+WD+ G L H
Sbjct: 127 WDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP 186
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
+R L + + D+ VK WDLE ++I + +GV + HP L G
Sbjct: 187 IRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLD 246
Query: 280 DSV 282
D +
Sbjct: 247 DGL 249
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 301 (111.0 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 80/274 (29%), Positives = 136/274 (49%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC R + GH G V S N +GS DRT+K+W+ G TL GH
Sbjct: 328 WSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTST 385
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + + K + S D ++ WD+E + + GH++ V C+ +++G
Sbjct: 386 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAY 441
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D + +VWD T+ + L GH N V S+ + VV+GS D++I+ WD+ G + TL
Sbjct: 442 DFMVKVWDPETETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL 499
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNML--SQQKTIINSMAVNEE 396
T H+ M L ++ S +A++ +K +++ G+ L + S+ ++ + + N+
Sbjct: 500 TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN 557
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
V+ T D+G++ WD K+G + T+ GS
Sbjct: 558 FVI-TSSDDGTVKLWDLKTGEFIRNLVTLESGGS 590
Score = 291 (107.5 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 82/311 (26%), Positives = 144/311 (46%)
Query: 151 RIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK 210
RI + W R E +P +V+ GH V + +GS D T+K+W G
Sbjct: 282 RIDTNWRRGELKSP----KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL 336
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
TL GH V + + + S D+ +K W+ E + I + +GH S V C+ LH
Sbjct: 337 RTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 394
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+++G RD+ RVWDI T + L GH V V + +VV+G++D +K WD
Sbjct: 395 R--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDP 450
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINS 390
+ TL H V ++ S +I+ +++ G +H + Q ++ +
Sbjct: 451 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT-SIRVWDVETGNCIHTLTGHQ-SLTSG 508
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
M + ++ +L +G + ++ WD K+G Q QT+ P ++ + L ++ + ++
Sbjct: 509 MEL-KDNILVSGNADSTVKIWDIKTG---QCLQTLQGPSK--HQSAVTCLQFNK--NFVI 560
Query: 451 TCEADKTIKMW 461
T D T+K+W
Sbjct: 561 TSSDDGTVKLW 571
Score = 155 (59.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 56/236 (23%), Positives = 106/236 (44%)
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
K Y+ D + +L+ KV++ + H+ + CL + +++G D+ +VW
Sbjct: 274 KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCG--NRIVSGSDDNTLKVWS 329
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
T + L GH V S R D +++GS D T+K W+ G+ + TL H +VR
Sbjct: 330 AVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR 387
Query: 348 AMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNG 406
M LH S A ++ +++ G+ LH ++ + V +G + +G +
Sbjct: 388 CMHLHEKRVVSGSRDA-TLRVWDIETGQCLHVLMGHVAAV---RCVQYDGRRVVSGAYDF 443
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+ WD + +T + +L +Y+L +D G +V+ D +I++W
Sbjct: 444 MVKVWD-------PETETCLH--TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 488
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 299 (110.3 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 80/274 (29%), Positives = 134/274 (48%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC R + GH G V S N +GS DRT+K+W+ G TL GH
Sbjct: 286 WSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTST 343
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + + K + S D ++ WD+E + + GH++ V C+ +++G
Sbjct: 344 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAY 399
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D + +VWD T+ + L GH N V S+ + VV+GS D++I+ WD+ G + TL
Sbjct: 400 DFMVKVWDPETETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL 457
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK--TIINSMAVNEE 396
T H+ M L ++ S +A++ +K +++ G+ L + K + + + N+
Sbjct: 458 TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 515
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
V+ T D+G++ WD K+G + T+ GS
Sbjct: 516 FVI-TSSDDGTVKLWDLKTGEFIRNLVTLESGGS 548
Score = 291 (107.5 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 82/311 (26%), Positives = 144/311 (46%)
Query: 151 RIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK 210
RI + W R E +P +V+ GH V + +GS D T+K+W G
Sbjct: 240 RIDTNWRRGELKSP----KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL 294
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
TL GH V + + + S D+ +K W+ E + I + +GH S V C+ LH
Sbjct: 295 RTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 352
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+++G RD+ RVWDI T + L GH V V + +VV+G++D +K WD
Sbjct: 353 R--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDP 408
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINS 390
+ TL H V ++ S +I+ +++ G +H + Q ++ +
Sbjct: 409 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT-SIRVWDVETGNCIHTLTGHQ-SLTSG 466
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
M + ++ +L +G + ++ WD K+G Q QT+ P ++ + L ++ + ++
Sbjct: 467 MEL-KDNILVSGNADSTVKIWDIKTG---QCLQTLQGPNK--HQSAVTCLQFNK--NFVI 518
Query: 451 TCEADKTIKMW 461
T D T+K+W
Sbjct: 519 TSSDDGTVKLW 529
Score = 155 (59.6 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 56/236 (23%), Positives = 106/236 (44%)
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
K Y+ D + +L+ KV++ + H+ + CL + +++G D+ +VW
Sbjct: 232 KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCG--NRIVSGSDDNTLKVWS 287
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
T + L GH V S R D +++GS D T+K W+ G+ + TL H +VR
Sbjct: 288 AVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR 345
Query: 348 AMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNG 406
M LH S A ++ +++ G+ LH ++ + V +G + +G +
Sbjct: 346 CMHLHEKRVVSGSRDA-TLRVWDIETGQCLHVLMGHVAAV---RCVQYDGRRVVSGAYDF 401
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+ WD + +T + +L +Y+L +D G +V+ D +I++W
Sbjct: 402 MVKVWD-------PETETCLH--TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 446
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 300 (110.7 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 68/253 (26%), Positives = 118/253 (46%)
Query: 165 WKCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W + K ++LTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+++ + + ++ WDLE K++R+ GH + + L HP + + +G +D+
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WDIR K +F GH V C F+ P + + + D T+K WDL GK M H
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 343 KKSVRAMALHPTEDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
V + HP E AS S++ +F +L K + + + + + + S+ N +G
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRSVLFNPDGCCLY 247
Query: 402 GGDNGSLWFWDWK 414
G SL + W+
Sbjct: 248 SGCQDSLRVYGWE 260
Score = 174 (66.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 59/209 (28%), Positives = 94/209 (44%)
Query: 258 HLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L LL TGG D +W I I +L GH + V SV + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLP-KG 374
V GS +I+ WDL K + TL HK ++ ++ HP + AS S + NIK +++ KG
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 375 -EFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLD 432
F + SQ + + + +G LA+ D+ ++ WD +G + PG
Sbjct: 139 CVFRYRGHSQA---VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-----PGHTG 190
Query: 433 SEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ + + L + +D+TI+ W
Sbjct: 191 P---VNVVEFHPNEYLLASGSSDRTIRFW 216
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 300 (110.7 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 68/253 (26%), Positives = 118/253 (46%)
Query: 165 WKCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W + K ++LTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+++ + + ++ WDLE K++R+ GH + + L HP + + +G +D+
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WDIR K +F GH V C F+ P + + + D T+K WDL GK M H
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 343 KKSVRAMALHPTEDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
V + HP E AS S++ +F +L K + + + + + + S+ N +G
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRSVLFNPDGCCLY 247
Query: 402 GGDNGSLWFWDWK 414
G SL + W+
Sbjct: 248 SGCQDSLRVYGWE 260
Score = 174 (66.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 59/209 (28%), Positives = 94/209 (44%)
Query: 258 HLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L LL TGG D +W I I +L GH + V SV + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLP-KG 374
V GS +I+ WDL K + TL HK ++ ++ HP + AS S + NIK +++ KG
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 375 -EFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLD 432
F + SQ + + + +G LA+ D+ ++ WD +G + PG
Sbjct: 139 CVFRYRGHSQA---VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-----PGHTG 190
Query: 433 SEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ + + L + +D+TI+ W
Sbjct: 191 P---VNVVEFHPNEYLLASGSSDRTIRFW 216
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 300 (110.7 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 68/253 (26%), Positives = 118/253 (46%)
Query: 165 WKCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W + K ++LTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+++ + + ++ WDLE K++R+ GH + + L HP + + +G +D+
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WDIR K +F GH V C F+ P + + + D T+K WDL GK M H
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 343 KKSVRAMALHPTEDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
V + HP E AS S++ +F +L K + + + + + + S+ N +G
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRSVLFNPDGCCLY 247
Query: 402 GGDNGSLWFWDWK 414
G SL + W+
Sbjct: 248 SGCQDSLRVYGWE 260
Score = 174 (66.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 59/209 (28%), Positives = 94/209 (44%)
Query: 258 HLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L LL TGG D +W I I +L GH + V SV + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLP-KG 374
V GS +I+ WDL K + TL HK ++ ++ HP + AS S + NIK +++ KG
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 375 -EFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLD 432
F + SQ + + + +G LA+ D+ ++ WD +G + PG
Sbjct: 139 CVFRYRGHSQA---VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-----PGHTG 190
Query: 433 SEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ + + L + +D+TI+ W
Sbjct: 191 P---VNVVEFHPNEYLLASGSSDRTIRFW 216
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 300 (110.7 bits), Expect = 4.9e-24, P = 4.9e-24
Identities = 68/253 (26%), Positives = 118/253 (46%)
Query: 165 WKCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W + K ++LTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+++ + + ++ WDLE K++R+ GH + + L HP + + +G +D+
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WDIR K +F GH V C F+ P + + + D T+K WDL GK M H
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 343 KKSVRAMALHPTEDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
V + HP E AS S++ +F +L K + + + + + + S+ N +G
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRSVLFNPDGCCLY 247
Query: 402 GGDNGSLWFWDWK 414
G SL + W+
Sbjct: 248 SGCQDSLRVYGWE 260
Score = 174 (66.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 59/209 (28%), Positives = 94/209 (44%)
Query: 258 HLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L LL TGG D +W I I +L GH + V SV + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLP-KG 374
V GS +I+ WDL K + TL HK ++ ++ HP + AS S + NIK +++ KG
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 375 -EFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLD 432
F + SQ + + + +G LA+ D+ ++ WD +G + PG
Sbjct: 139 CVFRYRGHSQA---VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-----PGHTG 190
Query: 433 SEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ + + L + +D+TI+ W
Sbjct: 191 P---VNVVEFHPNEYLLASGSSDRTIRFW 216
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 300 (110.7 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 68/253 (26%), Positives = 118/253 (46%)
Query: 165 WKCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W + K ++LTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+++ + + ++ WDLE K++R+ GH + + L HP + + +G +D+
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WDIR K +F GH V C F+ P + + + D T+K WDL GK M H
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 343 KKSVRAMALHPTEDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
V + HP E AS S++ +F +L K + + + + + + S+ N +G
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEPGPVRSILFNPDGCCLY 247
Query: 402 GGDNGSLWFWDWK 414
G SL + W+
Sbjct: 248 SGCQDSLRVYGWE 260
Score = 174 (66.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 59/209 (28%), Positives = 94/209 (44%)
Query: 258 HLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L LL TGG D +W I I +L GH + V SV + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLP-KG 374
V GS +I+ WDL K + TL HK ++ ++ HP + AS S + NIK +++ KG
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 375 -EFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLD 432
F + SQ + + + +G LA+ D+ ++ WD +G + PG
Sbjct: 139 CVFRYRGHSQA---VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF-----PGHTG 190
Query: 433 SEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ + + L + +D+TI+ W
Sbjct: 191 P---VNVVEFHPNEYLLASGSSDRTIRFW 216
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 299 (110.3 bits), Expect = 5.6e-24, P = 5.6e-24
Identities = 80/274 (29%), Positives = 134/274 (48%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC R + GH G V S N +GS DRT+K+W+ G TL GH
Sbjct: 326 WSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTST 383
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + + K + S D ++ WD+E + + GH++ V C+ +++G
Sbjct: 384 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAY 439
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D + +VWD T+ + L GH N V S+ + VV+GS D++I+ WD+ G + TL
Sbjct: 440 DFMVKVWDPETETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL 497
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK--TIINSMAVNEE 396
T H+ M L ++ S +A++ +K +++ G+ L + K + + + N+
Sbjct: 498 TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 555
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
V+ T D+G++ WD K+G + T+ GS
Sbjct: 556 FVI-TSSDDGTVKLWDLKTGEFIRNLVTLESGGS 588
Score = 291 (107.5 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 82/311 (26%), Positives = 144/311 (46%)
Query: 151 RIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK 210
RI + W R E +P +V+ GH V + +GS D T+K+W G
Sbjct: 280 RIDTNWRRGELKSP----KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL 334
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
TL GH V + + + S D+ +K W+ E + I + +GH S V C+ LH
Sbjct: 335 RTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 392
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+++G RD+ RVWDI T + L GH V V + +VV+G++D +K WD
Sbjct: 393 R--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDP 448
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINS 390
+ TL H V ++ S +I+ +++ G +H + Q ++ +
Sbjct: 449 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT-SIRVWDVETGNCIHTLTGHQ-SLTSG 506
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
M + ++ +L +G + ++ WD K+G Q QT+ P ++ + L ++ + ++
Sbjct: 507 MEL-KDNILVSGNADSTVKIWDIKTG---QCLQTLQGPNK--HQSAVTCLQFNK--NFVI 558
Query: 451 TCEADKTIKMW 461
T D T+K+W
Sbjct: 559 TSSDDGTVKLW 569
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 56/236 (23%), Positives = 106/236 (44%)
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
K Y+ D + +L+ KV++ + H+ + CL + +++G D+ +VW
Sbjct: 272 KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCG--NRIVSGSDDNTLKVWS 327
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
T + L GH V S R D +++GS D T+K W+ G+ + TL H +VR
Sbjct: 328 AVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR 385
Query: 348 AMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNG 406
M LH S A ++ +++ G+ LH ++ + V +G + +G +
Sbjct: 386 CMHLHEKRVVSGSRDA-TLRVWDIETGQCLHVLMGHVAAV---RCVQYDGRRVVSGAYDF 441
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+ WD + +T + +L +Y+L +D G +V+ D +I++W
Sbjct: 442 MVKVWD-------PETETCLH--TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 486
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 299 (110.3 bits), Expect = 6.4e-24, P = 6.4e-24
Identities = 73/254 (28%), Positives = 119/254 (46%)
Query: 165 WKCYRVISGHLGWVRSVAFDHSN-TWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W VA+ L LTGH + L
Sbjct: 11 WKLQEIVA-HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDL-LTGHTTPIESL 68
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+S+K + + ++ WDLE K++R+ GH + + L HP + +G D+
Sbjct: 69 QISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDI 128
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WD+R K IF H V C F+ P + + + D T+K WDL GK M T H
Sbjct: 129 KLWDVRRKGCIFKYKSHTQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 187
Query: 343 KKSVRAMALHPT-EDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V + HP+ E AS S+ I+ ++L K + + + ++ T + + N +G
Sbjct: 188 YGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV-SCIEEEATPVRCILFNPDGCCL 246
Query: 401 TGGDNGSLWFWDWK 414
GG SL + W+
Sbjct: 247 YGGFQDSLRVYGWE 260
Score = 205 (77.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 48/210 (22%), Positives = 85/210 (40%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + +++GH + S+ GS +I++WD+ + TL GH +
Sbjct: 48 WSVAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANI 107
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
L +++ S D +K WD+ + I Y H V CL P L + D
Sbjct: 108 CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADD 167
Query: 281 SVCRVWDIRTKMQIFALAGHDNTVCSVFTRPT-DPQVVTGSHDSTIKFWDLRYGKTMLTL 339
++WD+ +F GH V V P+ + + +GS TI+FWDL + +
Sbjct: 168 HTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCI 227
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKF 369
VR + +P C ++++ +
Sbjct: 228 EEEATPVRCILFNPDGCCLYGGFQDSLRVY 257
Score = 202 (76.2 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 55/218 (25%), Positives = 98/218 (44%)
Query: 204 VAKGTLKLT-LTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
V K KL + H V L + S + + GDD +V W + Q + GH +
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRH-DLLTGHTTP 64
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ L + ++++ G + RVWD+ + L GH +CS+ P V +GS
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 124
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNM 380
D+ IK WD+R + H ++VR + P ASA+ ++ +K ++L G+ +
Sbjct: 125 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 184
Query: 381 LSQQKTI-INSMAVNEEGVLATGGDNGSLWFWDWKSGH 417
+ + + E +LA+G + ++ FWD + H
Sbjct: 185 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFH 222
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 299 (110.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 80/274 (29%), Positives = 134/274 (48%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC R + GH G V S N +GS DRT+K+W+ G TL GH
Sbjct: 406 WSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTST 463
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + + K + S D ++ WD+E + + GH++ V C+ +++G
Sbjct: 464 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAY 519
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D + +VWD T+ + L GH N V S+ + VV+GS D++I+ WD+ G + TL
Sbjct: 520 DFMVKVWDPETETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL 577
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK--TIINSMAVNEE 396
T H+ M L ++ S +A++ +K +++ G+ L + K + + + N+
Sbjct: 578 TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 635
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
V+ T D+G++ WD K+G + T+ GS
Sbjct: 636 FVI-TSSDDGTVKLWDLKTGEFIRNLVTLESGGS 668
Score = 291 (107.5 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 82/311 (26%), Positives = 144/311 (46%)
Query: 151 RIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK 210
RI + W R E +P +V+ GH V + +GS D T+K+W G
Sbjct: 360 RIDTNWRRGELKSP----KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL 414
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
TL GH V + + + S D+ +K W+ E + I + +GH S V C+ LH
Sbjct: 415 RTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 472
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+++G RD+ RVWDI T + L GH V V + +VV+G++D +K WD
Sbjct: 473 R--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDP 528
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINS 390
+ TL H V ++ S +I+ +++ G +H + Q ++ +
Sbjct: 529 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT-SIRVWDVETGNCIHTLTGHQ-SLTSG 586
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
M + ++ +L +G + ++ WD K+G Q QT+ P ++ + L ++ + ++
Sbjct: 587 MEL-KDNILVSGNADSTVKIWDIKTG---QCLQTLQGPNK--HQSAVTCLQFNK--NFVI 638
Query: 451 TCEADKTIKMW 461
T D T+K+W
Sbjct: 639 TSSDDGTVKLW 649
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 56/236 (23%), Positives = 106/236 (44%)
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
K Y+ D + +L+ KV++ + H+ + CL + +++G D+ +VW
Sbjct: 352 KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCG--NRIVSGSDDNTLKVWS 407
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
T + L GH V S R D +++GS D T+K W+ G+ + TL H +VR
Sbjct: 408 AVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR 465
Query: 348 AMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNG 406
M LH S A ++ +++ G+ LH ++ + V +G + +G +
Sbjct: 466 CMHLHEKRVVSGSRDA-TLRVWDIETGQCLHVLMGHVAAV---RCVQYDGRRVVSGAYDF 521
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+ WD + +T + +L +Y+L +D G +V+ D +I++W
Sbjct: 522 MVKVWD-------PETETCLH--TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 566
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 299 (110.3 bits), Expect = 7.7e-24, P = 7.7e-24
Identities = 80/274 (29%), Positives = 134/274 (48%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC R + GH G V S N +GS DRT+K+W+ G TL GH
Sbjct: 411 WSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTST 468
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + + K + S D ++ WD+E + + GH++ V C+ +++G
Sbjct: 469 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAY 524
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D + +VWD T+ + L GH N V S+ + VV+GS D++I+ WD+ G + TL
Sbjct: 525 DFMVKVWDPETETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL 582
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK--TIINSMAVNEE 396
T H+ M L ++ S +A++ +K +++ G+ L + K + + + N+
Sbjct: 583 TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 640
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
V+ T D+G++ WD K+G + T+ GS
Sbjct: 641 FVI-TSSDDGTVKLWDLKTGEFIRNLVTLESGGS 673
Score = 291 (107.5 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 82/311 (26%), Positives = 144/311 (46%)
Query: 151 RIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK 210
RI + W R E +P +V+ GH V + +GS D T+K+W G
Sbjct: 365 RIDTNWRRGELKSP----KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL 419
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
TL GH V + + + S D+ +K W+ E + I + +GH S V C+ LH
Sbjct: 420 RTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 477
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+++G RD+ RVWDI T + L GH V V + +VV+G++D +K WD
Sbjct: 478 R--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDP 533
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINS 390
+ TL H V ++ S +I+ +++ G +H + Q ++ +
Sbjct: 534 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT-SIRVWDVETGNCIHTLTGHQ-SLTSG 591
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
M + ++ +L +G + ++ WD K+G Q QT+ P ++ + L ++ + ++
Sbjct: 592 MEL-KDNILVSGNADSTVKIWDIKTG---QCLQTLQGPNK--HQSAVTCLQFNK--NFVI 643
Query: 451 TCEADKTIKMW 461
T D T+K+W
Sbjct: 644 TSSDDGTVKLW 654
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 56/236 (23%), Positives = 106/236 (44%)
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
K Y+ D + +L+ KV++ + H+ + CL + +++G D+ +VW
Sbjct: 357 KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCG--NRIVSGSDDNTLKVWS 412
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
T + L GH V S R D +++GS D T+K W+ G+ + TL H +VR
Sbjct: 413 AVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR 470
Query: 348 AMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNG 406
M LH S A ++ +++ G+ LH ++ + V +G + +G +
Sbjct: 471 CMHLHEKRVVSGSRDA-TLRVWDIETGQCLHVLMGHVAAV---RCVQYDGRRVVSGAYDF 526
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+ WD + +T + +L +Y+L +D G +V+ D +I++W
Sbjct: 527 MVKVWD-------PETETCLH--TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 571
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 277 (102.6 bits), Expect = 8.3e-24, P = 8.3e-24
Identities = 58/202 (28%), Positives = 96/202 (47%)
Query: 165 WKCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W + K ++LTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+++ + + ++ WDLE K++R+ GH + + L HP + + +G +D+
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WDIR K +F GH V C F+ P + + + D T+K WDL GK M H
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 343 KKSVRAMALHPTEDCFASASAE 364
V + HP E AS S++
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSD 210
Score = 206 (77.6 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 49/177 (27%), Positives = 83/177 (46%)
Query: 204 VAKGTLKLT-LTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
V K KL + H V L + + + + GDD +V W + + I S GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
V + L+ ++++ G + RVWD+ + L GH +CS+ P V +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFL 377
D+ IK WD+R + H ++VR + P ASA+ ++ +K ++L G+ +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Score = 169 (64.5 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 52/164 (31%), Positives = 79/164 (48%)
Query: 258 HLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L LL TGG D +W I I +L GH + V SV + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLP-KG 374
V GS +I+ WDL K + TL HK ++ ++ HP + AS S + NIK +++ KG
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 375 -EFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSG 416
F + SQ + + + +G LA+ D+ ++ WD +G
Sbjct: 139 CVFRYRGHSQA---VRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Score = 112 (44.5 bits), Expect = 0.00054, P = 0.00054
Identities = 42/183 (22%), Positives = 83/183 (45%)
Query: 289 RTKMQIFALAGHDNTVCS-VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+T ++ + H + V S V + + + TG D + W + +++LT H V
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 348 AMALH-PTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDN 405
++ L+ P E A + + +I+ ++L + L ++ + I S+ + G +A+G +
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC-SLDFHPYGEFVASGSQD 126
Query: 406 GSLWFWDWK-SGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
++ WD + G F+ G S+A + L + G L + D T+K+W D
Sbjct: 127 TNIKLWDIRRKGCVFRYR------GH--SQA-VRCLRFSPDGKWLASAADDHTVKLW--D 175
Query: 465 ETA 467
TA
Sbjct: 176 LTA 178
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 296 (109.3 bits), Expect = 9.9e-24, P = 9.9e-24
Identities = 76/250 (30%), Positives = 120/250 (48%)
Query: 177 WVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAG 236
++RSV F + TG+ D+T+K+WD+ ++ T GH + L SS ++ S
Sbjct: 329 YIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGS 388
Query: 237 DDKQVKCWDLEQNKVIRSYH----GHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM 292
DK+ K WD+E+ K + G +GV + + P ++ G D++ R+WD +T
Sbjct: 389 GDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGY 448
Query: 293 QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTM----LTLTHHKKSVRA 348
+ GH ++V SV P + +GS D ++K WDL ++ T HK V +
Sbjct: 449 FLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLS 508
Query: 349 MALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAV----NEEGVLATG-G 403
+A P S S + +F P+ H ML K + S+A+ N GV ATG G
Sbjct: 509 VAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSG 568
Query: 404 DNGS-LWFWD 412
D S LW +D
Sbjct: 569 DFRSRLWKYD 578
Score = 246 (91.7 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 63/210 (30%), Positives = 98/210 (46%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL----TGHIEQVR 221
K GH + S+ + + +GS D+ KIWD+ KG TL G V
Sbjct: 360 KIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVT 419
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDS 281
+A+S + + D V+ WD + + Y GHL VY + P L +G D
Sbjct: 420 SVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDK 479
Query: 282 VCRVWDI---RTKMQIFA-LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
++WD+ R++ + A GH + V SV P +++GS D +++FWD R G T +
Sbjct: 480 SLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHM 539
Query: 338 TLTHHKKSVRAMALHPTEDC---FASASAE 364
L HK SV ++AL P + FA+ S +
Sbjct: 540 MLQGHKNSVISVALSPKNNSHGVFATGSGD 569
Score = 226 (84.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 68/264 (25%), Positives = 113/264 (42%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ-----VRGLAVSSK 228
H V V F + + TG +R+ +I+DV G E+ +R + S
Sbjct: 280 HNSVVCCVNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ + +DK VK WD+ K+ +++GH +Y L +++G D ++WDI
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 289 RTKMQIFALA----GHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
F L G N V SV P V GS D+ ++ WD + G + H
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLD 458
Query: 345 SVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNM---LSQQKTIINSMAVNEEGV-L 399
SV ++A P AS S + ++K ++L + K + S+A + +G L
Sbjct: 459 SVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWL 518
Query: 400 ATGGDNGSLWFWDWKSGHNFQQAQ 423
+G + S+ FWD ++G Q
Sbjct: 519 ISGSKDRSVQFWDPRNGTTHMMLQ 542
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 60/247 (24%), Positives = 112/247 (45%)
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSY--HGHLSG-VYCLGL--HPTIDILLTGGRD 280
S+ Y+ + G ++ + +D++ K + ++ G +Y + P + L TG D
Sbjct: 290 SNDGKYL-ATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAED 348
Query: 281 SVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLT 340
+VWDI TK GH+ + S+ +V+GS D K WD+ GK TL
Sbjct: 349 KTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLG 408
Query: 341 HH----KKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNE 395
+ K V ++A+ P A+ S +NI + ++ G FL ++ S+A +
Sbjct: 409 NEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVY-SVAFSP 467
Query: 396 EGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEA 454
+G LA+G + SL WD + + + G D + ++++ GS L++
Sbjct: 468 DGKSLASGSLDKSLKLWDLSGSRSRSRCRATFN-GHKDF---VLSVAFSPDGSWLISGSK 523
Query: 455 DKTIKMW 461
D++++ W
Sbjct: 524 DRSVQFW 530
Score = 154 (59.3 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 50/214 (23%), Positives = 99/214 (46%)
Query: 258 HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGH-----DNTVCSVFTRPT 312
H S V C+ L TG S +++D+ T ++ A D + SV P
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 313 DPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNL 371
+ TG+ D T+K WD+ K T H+ + ++ S S + K +++
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 372 PKGEFLHNMLSQQ---KTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
KG+ + +++ K + S+A++ +G ++A G + + WD ++G+ ++ +
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYE---- 454
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G LDS +Y++++ G L + DK++K+W
Sbjct: 455 -GHLDS---VYSVAFSPDGKSLASGSLDKSLKLW 484
Score = 146 (56.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVA----KGTLKLTLTGHIEQVRGLAVSSK 228
GHL V SVAF +GS D+++K+WD++ + + T GH + V +A S
Sbjct: 455 GHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPD 514
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID---ILLTGGRDSVCRV 285
+++ S D+ V+ WD GH + V + L P + + TG D R+
Sbjct: 515 GSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRL 574
Query: 286 W 286
W
Sbjct: 575 W 575
Score = 136 (52.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C +GH +V SVAF +W +GS DR+++ WD GT + L GH V +A+
Sbjct: 494 RCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVAL 553
Query: 226 SSKHTY--MFSAGD-DKQVKCW 244
S K+ +F+ G D + + W
Sbjct: 554 SPKNNSHGVFATGSGDFRSRLW 575
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 297 (109.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 71/245 (28%), Positives = 116/245 (47%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VRS+ + H+ W +G IK W +K+ ++RGL+ S
Sbjct: 162 ILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTD 221
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S DDK +K WD + GH V C+ HP ++++GG+D+ ++WD +
Sbjct: 222 LKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAK 281
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ I L GH +TV V +V+ S D +K +D+R K M T H K V A+
Sbjct: 282 SSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTAL 341
Query: 350 ALHPT-EDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNG 406
ALHP ED F S + I + + E + S + S++ + G +LA+G ++
Sbjct: 342 ALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDH 401
Query: 407 SLWFW 411
+ FW
Sbjct: 402 TTKFW 406
Score = 219 (82.2 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 73/297 (24%), Positives = 126/297 (42%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TGS+ +W+ + L H VR + S +M S D +K W N V
Sbjct: 142 TGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNV 201
Query: 252 IRSYHGH-LSGVYCLGLHPTIDILLTG-GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
+ + H S + L PT D+ L D + ++WD + L GH V V
Sbjct: 202 -KIFKAHEQSKIRGLSFSPT-DLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSW 259
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK- 368
P +V+G D+ IK WD + + + TL HK +V + + + SAS++ + K
Sbjct: 260 HPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKV 319
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVN--EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
F++ + + K + ++A++ E + +G +G + +W G+ QA+ +
Sbjct: 320 FDIRTMKEMQTFKGHGKEV-TALALHPYHEDLFVSGDKDGKILYWI--VGNPEPQAE--I 374
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETA-TPETHPLNFKPPKDI 482
+A +++LS+ G L + D T K W + A T + N KDI
Sbjct: 375 HSAH---DADVWSLSWHPIGHILASGSNDHTTKFWSRNRPADTMKDKYNNPNASKDI 428
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 39/202 (19%), Positives = 88/202 (43%)
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ C+ P L+TG +W+ T L HD+ V S+ + +V+G
Sbjct: 128 INCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDD 187
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNM 380
IK+W + H + +R ++ PT+ AS + + I K ++ + N
Sbjct: 188 SGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTE-DNQ 246
Query: 381 LSQQKTIINSMAVN-EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYA 439
L + ++ + ++ ++ +GG + ++ WD KS N T + ++ +
Sbjct: 247 LVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNI----TTLH----GHKSTVSK 298
Query: 440 LSYDVTGSRLVTCEADKTIKMW 461
+ ++ G+ +V+ +D+ +K++
Sbjct: 299 VEWNQNGNWIVSASSDQLLKVF 320
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 295 (108.9 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 78/269 (28%), Positives = 134/269 (49%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC R + GH G V S N +GS DRT+K+W+ G TL GH
Sbjct: 328 WSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTST 385
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + + K + S D ++ WD+E + + GH++ V C+ +++G
Sbjct: 386 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAY 441
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D + +VWD T+ + L GH N V S+ + VV+GS D++I+ WD+ G + TL
Sbjct: 442 DFMVKVWDPETETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL 499
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNML--SQQKTIINSMAVNEE 396
T H+ M L ++ S +A++ +K +++ G+ L + S+ ++ + + N+
Sbjct: 500 TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN 557
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
V+ T D+G++ WD K+G + T+
Sbjct: 558 FVI-TSSDDGTVKLWDLKTGEFIRNLVTL 585
Score = 292 (107.8 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 82/311 (26%), Positives = 144/311 (46%)
Query: 151 RIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK 210
RI + W R E +P +V+ GH V + +GS D T+K+W G
Sbjct: 282 RIDTNWRRGELRSP----KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL 336
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
TL GH V + + + S D+ +K W+ E + I + +GH S V C+ LH
Sbjct: 337 RTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 394
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+++G RD+ RVWDI T + L GH V V + +VV+G++D +K WD
Sbjct: 395 R--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDP 450
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINS 390
+ TL H V ++ S +I+ +++ G +H + Q ++ +
Sbjct: 451 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT-SIRVWDVETGNCIHTLTGHQ-SLTSG 508
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
M + ++ +L +G + ++ WD K+G Q QT+ P ++ + L ++ + ++
Sbjct: 509 MEL-KDNILVSGNADSTVKIWDIKTG---QCLQTLQGPSK--HQSAVTCLQFNK--NFVI 560
Query: 451 TCEADKTIKMW 461
T D T+K+W
Sbjct: 561 TSSDDGTVKLW 571
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 56/236 (23%), Positives = 105/236 (44%)
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
K Y+ D + +L KV++ + H+ + CL + +++G D+ +VW
Sbjct: 274 KSAYIRQHRIDTNWRRGELRSPKVLKGHDDHV--ITCLQFCG--NRIVSGSDDNTLKVWS 329
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
T + L GH V S R D +++GS D T+K W+ G+ + TL H +VR
Sbjct: 330 AVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR 387
Query: 348 AMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNG 406
M LH S A ++ +++ G+ LH ++ + V +G + +G +
Sbjct: 388 CMHLHEKRVVSGSRDA-TLRVWDIETGQCLHVLMGHVAAV---RCVQYDGRRVVSGAYDF 443
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+ WD + +T + +L +Y+L +D G +V+ D +I++W
Sbjct: 444 MVKVWD-------PETETCLH--TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 488
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 293 (108.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 87/307 (28%), Positives = 137/307 (44%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W+A P V+ GH V + H + TGS D T+K+W + KG + TL GH
Sbjct: 240 WNANPIMGSAVLRGHEDHVITCMQIHDDV-LVTGSDDNTLKVWCIDKGEVMYTLVGHTGG 298
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V +S Y+ S D+ VK W ++ + GH S V C+ + +I L+TG R
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI--LVTGSR 356
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D+ RVWD+ + + L GH V C F T VV+G +D T+K W+ G+ + T
Sbjct: 357 DTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWNAHTGRCIRT 413
Query: 339 LTHHKKSVRAMALHPTEDCFASASAEN---IKKFNLPKGEFLHNMLSQQKTIINSMAVNE 395
LT H V ++ S S + + F P+G+ +L ++ + M +
Sbjct: 414 LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG 473
Query: 396 EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV-TCEA 454
+++ D+ + WD G T V S + I +L + G +V T
Sbjct: 474 NILVSCNADS-HVRVWDIHEG-------TCVHMLS-GHRSAITSLQW--FGRNMVATSSD 522
Query: 455 DKTIKMW 461
D T+K+W
Sbjct: 523 DGTVKLW 529
Score = 292 (107.8 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 73/267 (27%), Positives = 132/267 (49%)
Query: 168 YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSS 227
Y ++ GH G V + + +GS DRT+K+W G+L TL GH VR +A++
Sbjct: 290 YTLV-GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG 348
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
+ + + D ++ WD+E + + + HGH + V C+ T +++GG D ++W+
Sbjct: 349 --SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWN 404
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY--GKTMLTLTH-HKK 344
T I L GH+N V S+ V +GS D++I+ WD G+ + L H
Sbjct: 405 AHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS 464
Query: 345 SVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGG 403
M L + S +A++ ++ +++ +G +H MLS ++ I S+ ++AT
Sbjct: 465 LTSGMQLRG--NILVSCNADSHVRVWDIHEGTCVH-MLSGHRSAITSLQWFGRNMVATSS 521
Query: 404 DNGSLWFWDWKSGHNFQQAQTIVQPGS 430
D+G++ WD + G + T+ G+
Sbjct: 522 DDGTVKLWDIERGALIRDLVTLDSGGN 548
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 40/181 (22%), Positives = 79/181 (43%)
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI- 288
T + S G D VK W+ + IR+ GH + VY L I+ +G D+ RVWD
Sbjct: 389 TTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFT 448
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
R + Q +T + + +V+ + DS ++ WD+ G + L+ H+ ++ +
Sbjct: 449 RPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITS 508
Query: 349 MALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSL 408
+ S+ +K +++ +G + ++++ L +GG+ G +
Sbjct: 509 LQWFGRNMVATSSDDGTVKLWDIERGALIRDLVT----------------LDSGGNGGCI 552
Query: 409 W 409
W
Sbjct: 553 W 553
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 293 (108.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 87/307 (28%), Positives = 137/307 (44%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W+A P V+ GH V + H + TGS D T+K+W + KG + TL GH
Sbjct: 240 WNANPIMGSAVLRGHEDHVITCMQIHDDV-LVTGSDDNTLKVWCIDKGEVMYTLVGHTGG 298
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V +S Y+ S D+ VK W ++ + GH S V C+ + +I L+TG R
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI--LVTGSR 356
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D+ RVWD+ + + L GH V C F T VV+G +D T+K W+ G+ + T
Sbjct: 357 DTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWNAHTGRCIRT 413
Query: 339 LTHHKKSVRAMALHPTEDCFASASAEN---IKKFNLPKGEFLHNMLSQQKTIINSMAVNE 395
LT H V ++ S S + + F P+G+ +L ++ + M +
Sbjct: 414 LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG 473
Query: 396 EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV-TCEA 454
+++ D+ + WD G T V S + I +L + G +V T
Sbjct: 474 NILVSCNADS-HVRVWDIHEG-------TCVHMLS-GHRSAITSLQW--FGRNMVATSSD 522
Query: 455 DKTIKMW 461
D T+K+W
Sbjct: 523 DGTVKLW 529
Score = 292 (107.8 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 73/267 (27%), Positives = 132/267 (49%)
Query: 168 YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSS 227
Y ++ GH G V + + +GS DRT+K+W G+L TL GH VR +A++
Sbjct: 290 YTLV-GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG 348
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
+ + + D ++ WD+E + + + HGH + V C+ T +++GG D ++W+
Sbjct: 349 --SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWN 404
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY--GKTMLTLTH-HKK 344
T I L GH+N V S+ V +GS D++I+ WD G+ + L H
Sbjct: 405 AHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS 464
Query: 345 SVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGG 403
M L + S +A++ ++ +++ +G +H MLS ++ I S+ ++AT
Sbjct: 465 LTSGMQLRG--NILVSCNADSHVRVWDIHEGTCVH-MLSGHRSAITSLQWFGRNMVATSS 521
Query: 404 DNGSLWFWDWKSGHNFQQAQTIVQPGS 430
D+G++ WD + G + T+ G+
Sbjct: 522 DDGTVKLWDIERGALIRDLVTLDSGGN 548
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 40/181 (22%), Positives = 79/181 (43%)
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI- 288
T + S G D VK W+ + IR+ GH + VY L I+ +G D+ RVWD
Sbjct: 389 TTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFT 448
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
R + Q +T + + +V+ + DS ++ WD+ G + L+ H+ ++ +
Sbjct: 449 RPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITS 508
Query: 349 MALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSL 408
+ S+ +K +++ +G + ++++ L +GG+ G +
Sbjct: 509 LQWFGRNMVATSSDDGTVKLWDIERGALIRDLVT----------------LDSGGNGGCI 552
Query: 409 W 409
W
Sbjct: 553 W 553
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 296 (109.3 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 79/274 (28%), Positives = 134/274 (48%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC R + GH G V S N +GS DRT+K+W+ G TL GH
Sbjct: 459 WSAVTGKCLRTLVGHTGGVWSSQM-RDNI-IISGSTDRTLKVWNAETGECIHTLYGHTST 516
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + + K + S D ++ WD+E + + GH++ V C+ +++G
Sbjct: 517 VRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAY 572
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D + +VWD T+ + L GH N V S+ + VV+GS D++I+ WD+ G + TL
Sbjct: 573 DFMVKVWDPETETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL 630
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK--TIINSMAVNEE 396
T H+ M L ++ S +A++ +K +++ G+ L + K + + + N+
Sbjct: 631 TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN 688
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
V+ T D+G++ WD ++G + T+ GS
Sbjct: 689 FVI-TSSDDGTVKLWDLRTGEFIRNLVTLESGGS 721
Score = 286 (105.7 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 81/311 (26%), Positives = 144/311 (46%)
Query: 151 RIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK 210
RI + W R + +P +V+ GH V + +GS D T+K+W G
Sbjct: 413 RIDTNWRRGDLKSP----KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL 467
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
TL GH V + + + S D+ +K W+ E + I + +GH S V C+ LH
Sbjct: 468 RTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 525
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+++G RD+ RVWDI T + L GH V V + +VV+G++D +K WD
Sbjct: 526 R--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDP 581
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINS 390
+ TL H V ++ S +I+ +++ G +H + Q ++ +
Sbjct: 582 ETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT-SIRVWDVETGNCIHTLTGHQ-SLTSG 639
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
M + ++ +L +G + ++ WD K+G Q QT+ P ++ + L ++ + ++
Sbjct: 640 MEL-KDNILVSGNADSTVKIWDIKTG---QCLQTLQGPHK--HQSAVTCLQFNK--NFVI 691
Query: 451 TCEADKTIKMW 461
T D T+K+W
Sbjct: 692 TSSDDGTVKLW 702
Score = 159 (61.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 57/236 (24%), Positives = 106/236 (44%)
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
K Y+ D + DL+ KV++ + H+ + CL + +++G D+ +VW
Sbjct: 405 KSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHV--ITCLQFCG--NRIVSGSDDNTLKVWS 460
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
T + L GH V S R D +++GS D T+K W+ G+ + TL H +VR
Sbjct: 461 AVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR 518
Query: 348 AMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNG 406
M LH S A ++ +++ G+ LH ++ + V +G + +G +
Sbjct: 519 CMHLHEKRVVSGSRDA-TLRVWDIETGQCLHVLMGHVAAV---RCVQYDGRRVVSGAYDF 574
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+ WD + +T + +L +Y+L +D G +V+ D +I++W
Sbjct: 575 MVKVWD-------PETETCLH--TLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 619
Score = 38 (18.4 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 81 QPSGSSDVLALPGPEGSRDAQKAGAQNALVVGPSAQPKG 119
QP VL P E ++ ++ A+ GP Q G
Sbjct: 39 QPEHPDQVLEEPEQEEAQQQRREPAEEEDEGGPERQQDG 77
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 295 (108.9 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 77/292 (26%), Positives = 128/292 (43%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ GH WV+SV F H + + S D T+KIWD A GTL+ L GH + VR + S
Sbjct: 301 LEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSR 360
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ S +D+ V+ W+ + ++ H V + L + ++WD RT
Sbjct: 361 LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT 420
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA 350
L GHD+ V SV P + + S D T+K W G TL H VR++
Sbjct: 421 GSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVV 480
Query: 351 LHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLW 409
ASAS + +K ++ +N+ S + + + ++ +LA+ D+ ++
Sbjct: 481 FSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVK 540
Query: 410 FWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
WD +G T+ G D + ++S+ L + D T+K+W
Sbjct: 541 IWDTATG---SLENTL--EGHDDR---VNSVSFSPDSRLLASASDDGTVKIW 584
Score = 282 (104.3 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 78/295 (26%), Positives = 127/295 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R++ GH VRSV F H + +GS DRT++IW+ G L+ T H + V ++ +
Sbjct: 341 RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHD 400
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA D VK WD + GH V + P +L + D ++W
Sbjct: 401 SRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHA 460
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
T L GH++ V SV + + S D T+K WD L H VR+
Sbjct: 461 ATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRS 520
Query: 349 MALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNG 406
+ ASAS + +K ++ G L N L +NS++ + + +LA+ D+G
Sbjct: 521 VVFSHDSRLLASASDDMTVKIWDTATGS-LENTLEGHDDRVNSVSFSPDSRLLASASDDG 579
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
++ W +G T+ I +L++ T + L + D T+K+W
Sbjct: 580 TVKIWYAATG-------TVQHTFDGSGRVAI-SLAFSHTSNLLASAMDDGTVKIW 626
Score = 278 (102.9 bits), Expect = 9.7e-21, P = 9.7e-21
Identities = 77/299 (25%), Positives = 129/299 (43%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYM 232
GH V SV+F H + + S D T+KIWD A L+ TL GH E V+ + S +
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 233 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM 292
SA DD VK WD + R GH V + ++ +G D R+W+ T +
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL 380
Query: 293 QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALH 352
H+++V +V ++ + S +K WD R G L H V +++
Sbjct: 381 LRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFS 440
Query: 353 PTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWF 410
P ASAS + +K ++ G L L + S+ + + ++A+ D+ ++
Sbjct: 441 PDSRLLASASDDRTVKIWHAATGS-LQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKI 499
Query: 411 WDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMWREDETAT 468
WD T+ +L+S + ++ + L + D T+K+W +TAT
Sbjct: 500 WD---------TATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW---DTAT 546
Score = 252 (93.8 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 74/279 (26%), Positives = 117/279 (41%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H V +V+F H + + S +KIWD G+L+ L GH + V ++ S +
Sbjct: 388 HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLA 447
Query: 234 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ 293
SA DD+ VK W + R+ GH V + ++ + D ++WD T
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPL 507
Query: 294 IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
L HDN V SV + + S D T+K WD G TL H V +++ P
Sbjct: 508 QNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP 567
Query: 354 TEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWD 412
ASAS + +K + G H + I+ + +LA+ D+G++ WD
Sbjct: 568 DSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Query: 413 WKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVT 451
+ + T LD E I + +D + S L+T
Sbjct: 628 MEI---YSLRHTF----DLDHE--IQRIQFDKSMSSLIT 657
Score = 226 (84.6 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 51/171 (29%), Positives = 70/171 (40%)
Query: 161 WHAPW-KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
WHA R + GH WVRSV F H + + S D T+KIWD A L+ L H
Sbjct: 458 WHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNW 517
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + S + SA DD VK WD + + GH V + P +L +
Sbjct: 518 VRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASD 577
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
D ++W T G S+ T + + D T+K WD+
Sbjct: 578 DGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDM 628
Score = 172 (65.6 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 53/238 (22%), Positives = 99/238 (41%)
Query: 230 TYMFSAGDDKQVKCWDLE--QNKVIRS---YHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
+Y F+ + +KC L+ + ++ S + GH V + +L + D +
Sbjct: 229 SYRFALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVK 288
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
+WD T L GH+ V SV + + S D T+K WD G L H
Sbjct: 289 IWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHND 348
Query: 345 SVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGG 403
SVR++ AS S + ++ + G H + +++ ++ LA+
Sbjct: 349 SVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASAS 408
Query: 404 DNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
D G++ WD ++G Q +++ G D + ++S+ L + D+T+K+W
Sbjct: 409 DGGNVKIWDTRTG----SLQNVLE-GHDDC---VNSVSFSPDSRLLASASDDRTVKIW 458
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 64/195 (32%), Positives = 91/195 (46%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
V H VRSV F F T S D+TIK+W + +L+ HI VR S
Sbjct: 129 VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDG 188
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ SA DDK VK WD + + SY H V + HP+ + G D+ +VWD+R
Sbjct: 189 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 248
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T + H V ++ P+ +VT S DST+K DL G+ + TL H+ +
Sbjct: 249 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 308
Query: 350 ALHPTEDCFASASAE 364
A T + FAS ++
Sbjct: 309 AFSRTGEYFASGGSD 323
Score = 209 (78.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 70/257 (27%), Positives = 113/257 (43%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLG 266
+L+ GH + V + S + S D + W ++ Q++ R + GH V C+
Sbjct: 41 SLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVN 99
Query: 267 LHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
P+ +L +G RD R+W K + H TV SV VT S D TIK
Sbjct: 100 FSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK 159
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
W K + +L+ H VR P SAS + +K ++ E +H+ +
Sbjct: 160 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC-EHG 218
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
+ + + G V A G DN ++ WD ++ H ++Q L S A + ALS+
Sbjct: 219 GFVTYVDFHPSGTCVAAAGMDN-TVKVWDVRT-HR------LLQHYQLHS-AAVNALSFH 269
Query: 444 VTGSRLVTCEADKTIKM 460
+G+ LVT +D T+K+
Sbjct: 270 PSGNYLVTASSDSTLKI 286
Score = 192 (72.6 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+S H+ WVR F + S D+T+K+WD + H V + T
Sbjct: 172 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 231
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +AG D VK WD+ +++++ Y H + V L HP+ + L+T DS ++ D+
Sbjct: 232 CVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLME 291
Query: 291 KMQIFALAGHDNTVCSV-FTRPTDPQVVTGSHDSTIKFW 328
++ L GH +V F+R T +G D + W
Sbjct: 292 GRLLYTLHGHQGPATTVAFSR-TGEYFASGGSDEQVMVW 329
Score = 154 (59.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 46/217 (21%), Positives = 93/217 (42%)
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
E + R + GH V C+ + L +G DS VW ++ + + + GH + V
Sbjct: 38 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 97
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN- 365
V P+ + +GS D T++ W H +VR++ F +AS +
Sbjct: 98 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQT 424
IK ++ + +FL + LSQ + + +G ++ + D+ ++ WD K+ + +
Sbjct: 158 IKVWSTHRQKFLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSR--ECVHS 213
Query: 425 IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ G + + + +G+ + D T+K+W
Sbjct: 214 YCEHGGF-----VTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/121 (27%), Positives = 49/121 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C H G+V V F S T D T+K+WDV L H V L+
Sbjct: 209 ECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 268
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
Y+ +A D +K DL + +++ + HGH + T + +GG D V
Sbjct: 269 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 328
Query: 286 W 286
W
Sbjct: 329 W 329
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 289 (106.8 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 80/255 (31%), Positives = 123/255 (48%)
Query: 165 WKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL--TLTGHIEQVRG 222
WKC ++GH + S+A + SN F T S D TIK+ + G K TL GH +V
Sbjct: 902 WKCLYTVNGHRKSIESIACN-SNYIF-TSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNC 959
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG-HLSGVYCLGLHPTIDILLTGGRDS 281
+ + K Y+FS DK +K WDL K I+S+ G H + L L L +GG D
Sbjct: 960 VVANEK--YLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRY--LFSGGNDQ 1015
Query: 282 VCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
+ VWD T +F + GH++ V S+ T + + S D+ IK WDL + TL
Sbjct: 1016 IIYVWDTETLSMLFNMQGHEDWVLSLHC--TASYLFSTSKDNVIKIWDLSNFSCIDTLKG 1073
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H SV + + + S S +N IK ++L E ++ + + + V +++
Sbjct: 1074 HWNSVSSCVVK--DRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQIIS 1131
Query: 401 TGGDNGSLWFWDWKS 415
D GS+ W+W+S
Sbjct: 1132 AAFD-GSIKVWEWQS 1145
Score = 195 (73.7 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 72/301 (23%), Positives = 131/301 (43%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLA 224
KC I V S+AF + C G D T +++DV L T+ GH + + +A
Sbjct: 860 KCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIA 919
Query: 225 VSSKHTYMFSAGDDKQVKCWDLEQN--KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
+S Y+F++ D +K + K I + GH V C+ + L + D
Sbjct: 920 CNSN--YIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEKY--LFSCSYDKT 975
Query: 283 CRVWDIRTKMQIFALAG-HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
+VWD+ T +I + G H + ++ + + +G +D I WD + +
Sbjct: 976 IKVWDLSTFKEIKSFEGVHTKYIKTLAL--SGRYLFSGGNDQIIYVWDTETLSMLFNMQG 1033
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H+ V ++LH T S S +N IK ++L + + ++ S V ++ L
Sbjct: 1034 HEDWV--LSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSV--SSCVVKDRYLY 1089
Query: 401 TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKM 460
+G ++ S+ WD + + TI + SL G+ L V +++++ D +IK+
Sbjct: 1090 SGSEDNSIKVWDLDT---LECVYTIPKSHSL----GVKCLM--VFNNQIISAAFDGSIKV 1140
Query: 461 W 461
W
Sbjct: 1141 W 1141
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 263 (97.6 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 62/195 (31%), Positives = 89/195 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
V H VRSV F T S D+T+K+W + +LT HI VR S
Sbjct: 98 VFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG 157
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ SA DDK VK WD + + SY H V + HP+ + G D+ +VWD R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTR 217
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T + H V ++ P+ ++T S DST+K DL G+ + TL H+ +
Sbjct: 218 THRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 350 ALHPTEDCFASASAE 364
A T + FAS ++
Sbjct: 278 AFSRTGEYFASGGSD 292
Score = 217 (81.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 66/256 (25%), Positives = 114/256 (44%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLG 266
+L+ GH + V + S ++ S D + W ++ Q++ R + GH V C+
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVN 68
Query: 267 LHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
P+ +L +G RD R+W K + H TV SV +VT S D T+K
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK 128
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
W + + +LT H VR P SAS + +K ++ E +H+ +
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC-EHG 187
Query: 386 TIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
+ + + G +A G + ++ WD ++ H +VQ L S A + ALS+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT-HR------LVQHYQLHS-AAVNALSFHP 239
Query: 445 TGSRLVTCEADKTIKM 460
+G+ L+T +D T+K+
Sbjct: 240 SGNYLITASSDSTLKI 255
Score = 189 (71.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 42/159 (26%), Positives = 71/159 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++ H+ WVR F + S D+T+K+WD + H V + T
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +AG D VK WD +++++ Y H + V L HP+ + L+T DS ++ D+
Sbjct: 201 CIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLME 260
Query: 291 KMQIFALAGHDNTVCSV-FTRPTDPQVVTGSHDSTIKFW 328
++ L GH +V F+R T +G D + W
Sbjct: 261 GRLLYTLHGHQGPATTVAFSR-TGEYFASGGSDEQVMVW 298
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 42/217 (19%), Positives = 90/217 (41%)
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
E + R + GH V C+ L +G DS +W ++ + + + GH + V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN- 365
V P+ + +GS D T++ W H +VR++ +AS +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQT 424
+K ++ + FL + L+Q + + +G ++ + D+ ++ WD K+ + +
Sbjct: 127 VKVWSTHRQRFLFS-LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSR--ECVHS 182
Query: 425 IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ G + + + +G+ + D T+K+W
Sbjct: 183 YCEHGGF-----VTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C H G+V V F S T D T+K+WD L H V L+
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSF 237
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
Y+ +A D +K DL + +++ + HGH + T + +GG D V
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 286 W 286
W
Sbjct: 298 W 298
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 263 (97.6 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 83/319 (26%), Positives = 152/319 (47%)
Query: 153 PSKWPR-PEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL 211
P PR PE P K + + G VR+V F+ + T +D+T+K+W+ +GTL
Sbjct: 4 PEPKPRAPE--LPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLR 61
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
T +GH +V A S ++++ S G DK V WD+ +V+R + GH V + +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 272 DILLTGGRDSVCRVWDIRTKMQ--IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWD 329
++L+G DS R WD R++ + L + + SV + +D +++ GS D ++ +D
Sbjct: 122 TVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSV--KVSDHEILAGSVDGRVRRYD 179
Query: 330 LRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNML---SQQK 385
LR G+ ++ + + C +S ++ ++ + GE L + +QQ
Sbjct: 180 LRMGQ--VSSDYVGSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQY 237
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
+ ++ + V++ D G ++FWD G A + P + S + +L+Y T
Sbjct: 238 KLDCCLSERDTHVVSCSED-GKVFFWDLVEG-----ALALALP--VGSNV-VQSLAYHPT 288
Query: 446 GSRLVTCEADKTIKMWRED 464
L+T +I+ WRE+
Sbjct: 289 EPCLLTAMGG-SIQYWREE 306
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 263 (97.6 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 77/307 (25%), Positives = 147/307 (47%)
Query: 164 PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
P K ++ GH G V + F+ + T DRTI++W+ +G L T H +VR +
Sbjct: 7 PTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDV 66
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
V+S + S G D+QV WD+ +VIR + GH V + + + ++++ G D
Sbjct: 67 HVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSL 126
Query: 284 RVWDIRTKM--QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
RVWD R+ + + +TV SV T+ ++ GS D T++ +D+R G+ M +
Sbjct: 127 RVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGSVDGTVRTFDMRIGREMSD--N 182
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLH---NMLSQQ-KTIINSMAVNEE 396
+ V +++ +C + ++ ++ + GE L +S+ KT + N +
Sbjct: 183 LGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKT--DCCLTNSD 240
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADK 456
+ G ++G ++FWD A+ + + + D + ++SY ++T D
Sbjct: 241 AHVIGGSEDGLVFFWD------LVDAKVLSKFRAHDLV--VTSVSYHPKEDCMLTSSVDG 292
Query: 457 TIKMWRE 463
TI++W++
Sbjct: 293 TIRVWKK 299
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 263 (97.6 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 79/318 (24%), Positives = 153/318 (48%)
Query: 157 PRPEW-HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTG 215
PRP+ P +R + G VR+V F+ + T +D+++K+W V++GTL T +G
Sbjct: 6 PRPQAPQLPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSG 65
Query: 216 HIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILL 275
H +V S ++ + S DK V WD+ +V R GH V C+ + ++L
Sbjct: 66 HGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVML 125
Query: 276 TGGRDSVCRVWDIRTK-MQ-IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
+G D R WD R++ M+ I L + + S+ + ++ +++TGS D ++ +DLR G
Sbjct: 126 SGSIDGTVRCWDTRSRRMEPIQILDESQDGISSL--KVSEHELLTGSVDGRVRRYDLRMG 183
Query: 334 KTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ-QKTI-INS 390
+ L + + + + C S+S ++ ++ + GE L K ++
Sbjct: 184 Q--LQVDYIGSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDC 241
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
+++ + + ++G +++WD G + T+ P +A + +LS+ T RL+
Sbjct: 242 CLTDKDTHVLSCSEDGHVYYWDLVEG-----SLTLKLPVG---KAVVQSLSFHPTEPRLL 293
Query: 451 TCEADKTIKMW-REDETA 467
T + +++W E E A
Sbjct: 294 T-SMEGRVQVWGAEPEDA 310
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 261 (96.9 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 63/195 (32%), Positives = 89/195 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
V H VRSV F T S D+TIK+W V + +L+ HI VR S
Sbjct: 99 VFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG 158
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ SA DDK VK WD + I S+ H + HP+ + G D +VWD+R
Sbjct: 159 RLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ H V S+ P+ ++T S+DST+K DL G+ + TL H+ +
Sbjct: 219 MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCV 278
Query: 350 ALHPTEDCFASASAE 364
A T D FAS ++
Sbjct: 279 AFSRTGDFFASGGSD 293
Score = 210 (79.0 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 44/163 (26%), Positives = 72/163 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+S H+ WVR F + S D+T+K+WD + H + T
Sbjct: 142 LSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGT 201
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +AG DK VK WD+ N++++ Y H + V L HP+ + L+T DS ++ D+
Sbjct: 202 CIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLE 261
Query: 291 KMQIFALAGHDN-TVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
++ L GH C F+R D +G D + W +
Sbjct: 262 GRLLYTLHGHQGPATCVAFSRTGD-FFASGGSDEQVMVWKTNF 303
Score = 202 (76.2 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 63/257 (24%), Positives = 108/257 (42%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYH--GHLSGVYCL 265
+L+ GH + + + S + S D +K W ++ +R+Y GH V C+
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQ--MRAYCLVGHKDAVMCV 68
Query: 266 GLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
P+ ++ +G RD +W K + H TV SV +VT S D TI
Sbjct: 69 QFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTI 128
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
K W + K + +L+ H VR P ASAS + +K ++ E +H+ +
Sbjct: 129 KVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFC-EH 187
Query: 385 KTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
N + + G +A G + ++ WD + Q Q A + +LS+
Sbjct: 188 GGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQV--------HTAAVNSLSFH 239
Query: 444 VTGSRLVTCEADKTIKM 460
+G+ L+T D T+K+
Sbjct: 240 PSGNYLITASNDSTLKI 256
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/139 (27%), Positives = 59/139 (42%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C H G+ V F S T D+T+K+WDV L H V L+
Sbjct: 179 ECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSF 238
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
Y+ +A +D +K DL + +++ + HGH C+ T D +GG D V
Sbjct: 239 HPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMV 298
Query: 286 WDIRTKMQIFALAGHDNTV 304
W +T F+ A +D +
Sbjct: 299 W--KTN---FSAADYDGVL 312
Score = 160 (61.4 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 47/217 (21%), Positives = 94/217 (43%)
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
E + R + GH + + L +G DS ++W ++ +M+ + L GH + V
Sbjct: 8 EDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMC 67
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN- 365
V P+ V +GS D T+ W H +VR++ +AS +
Sbjct: 68 VQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQT 424
IK + + + +FL + LSQ + + +G ++A+ D+ ++ WD K+ + +
Sbjct: 128 IKVWTVHRQKFLFS-LSQHINWVRCARFSPDGRLIASASDDKTVKLWD-KTSR--ECIHS 183
Query: 425 IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ G + + + +G+ + DKT+K+W
Sbjct: 184 FCEHGGFANH-----VEFHPSGTCIAAAGTDKTVKVW 215
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 261 (96.9 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 89/328 (27%), Positives = 151/328 (46%)
Query: 153 PSKWPR-PEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL 211
P PR PE P K + + G VR+V F+ + T +D+T+K+W+ +GTL
Sbjct: 4 PEPKPRGPE--LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLR 61
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
T +GH +V A S ++ + S G DK V WD+ +V+R + GH V + +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 272 DILLTGGRDSVCRVWDIRTKMQ--IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWD 329
++L+G DS R WD R++ + L + + SV + +D +V+ GS D ++ +D
Sbjct: 122 TVILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSV--KVSDHEVLAGSVDGRVRRYD 179
Query: 330 LRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ-KTI 387
LR G+ L + + + C +S ++ ++ + GE L + K
Sbjct: 180 LRMGQ--LFSDYVGSPITCICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEY 237
Query: 388 INSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTI-VQPGSLDSEAGIYALSYDVT 445
++E + + ++G ++FWD G A + V PG + S L+Y T
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWDLVEG---ALALALPVGPGVVQS------LTYHPT 288
Query: 446 GSRLVTCEADKTIKMWREDETATPETHP 473
L+T +I+ WRE ET E P
Sbjct: 289 EPCLLTAMGG-SIQCWRE-ETYEAEGAP 314
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 281 (104.0 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 59/207 (28%), Positives = 98/207 (47%)
Query: 165 WKCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
WK +++ H V S+ S TG D + +W + K ++LTGH V +
Sbjct: 11 WKLQEIVA-HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+++ + + ++ WDLE K++R+ GH + + L HP + + +G +D+
Sbjct: 70 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 129
Query: 284 RVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
++WDIR K +F GH V C F+ P + + + D T+K WDL GK M H
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 343 KKSVRAMALHPTEDCFASASAENIKKF 369
V + HP E AS S++ +F
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRF 215
Score = 229 (85.7 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 62/231 (26%), Positives = 106/231 (45%)
Query: 204 VAKGTLKLT-LTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
V K KL + H V L + + + + GDD +V W + + I S GH S
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
V + L+ ++++ G + RVWD+ + L GH +CS+ P V +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNM 380
D+ IK WD+R + H ++VR + P ASA+ ++ +K ++L G+ +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 381 LSQQKTIINSMAVN-EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIV-QPG 429
+ N + + E +LA+G + ++ FWD + FQ I +PG
Sbjct: 186 PGHTGPV-NVVEFHPNEYLLASGSSDRTIRFWDLEK---FQVVSCIEGEPG 232
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C ++GH V SV + GS +I++WD+ + TL GH + L
Sbjct: 55 CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH 114
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
++ S D +K WD+ + + Y GH V CL P L + D ++W
Sbjct: 115 PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
D+ + GH V V P + + +GS D TI+FWDL
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 193 (73.0 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 42/129 (32%), Positives = 61/129 (47%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K R + GH + S+ F + +GS D IK+WD+ + GH + VR L
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
S ++ SA DD VK WDL K++ + GH V + HP +L +G D R
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF 215
Query: 286 WDIRTKMQI 294
WD+ K Q+
Sbjct: 216 WDLE-KFQV 223
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 275 (101.9 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 73/262 (27%), Positives = 120/262 (45%)
Query: 157 PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGH 216
PRP P K +++GH + SV F S + + S D TIK+WD G + TL GH
Sbjct: 94 PRP----PEK--HILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGH 147
Query: 217 IEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V+ + + S D +K WD + +++ HGH V C+ P+ D L++
Sbjct: 148 TNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLIS 207
Query: 277 GGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTM 336
RD +VW+ T I L GH++ V + + + S+D TIK W++ G+ +
Sbjct: 208 SSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECL 267
Query: 337 LTLTHHKKSVRAMALHPTEDCFASASAENI--KKFNLPKGEFLHNMLSQQKTIINSMAVN 394
T H V +A F++A+ +I + P+G+ S+ K V
Sbjct: 268 ATYREHSHVVECLA-------FSTANIIDIPGSLLSTPEGK------SKVKQGPGGNLVG 314
Query: 395 EEGVLATGGDNGSLWFWDWKSG 416
+ G LATG + ++ W+ +G
Sbjct: 315 QCGYLATGSRDKTIKIWELATG 336
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 54/196 (27%), Positives = 83/196 (42%)
Query: 161 WHAPWK-CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A C + + GH WVR + + + S D+TIK W++ KG T H
Sbjct: 217 WEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHV 276
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V LA S+ + + ++KV + G+L G C L TG R
Sbjct: 277 VECLAFSTANIIDIPGS----LLSTPEGKSKVKQGPGGNLVG-QC-------GYLATGSR 324
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D ++W++ T + GHDN V +V P +++ D TI+ WD+ G+ + T+
Sbjct: 325 DKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTI 384
Query: 340 T--H-HKKSVRAMALH 352
H H S LH
Sbjct: 385 NEAHTHFISCLDFCLH 400
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 39/105 (37%), Positives = 57/105 (54%)
Query: 189 WFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ 248
+ TGS D+TIKIW++A G T GH VR + ++ S GDDK ++ WD+ Q
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 249 NKVIRSYH-GHLSGVYCLG--LH-PTIDILLTGGRDSVCRVWDIR 289
+ I++ + H + CL LH P I TGG D V +VW ++
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHI---ATGGVDDVIKVWKLQ 419
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 46/167 (27%), Positives = 78/167 (46%)
Query: 297 LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTED 356
L GH N + SV P+ +V+ S D+TIK WD G+ TL H +V+ + T +
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 357 CFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWK 414
AS SA+ IK ++ + + + + + + G L + + ++ W+
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNV-SCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 415 SGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+G+ + T+V G D I +S D GS + +C D+TIK W
Sbjct: 221 TGYCIK---TLV--GHEDWVRKI-TVSED--GSCIASCSNDQTIKTW 259
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 277 (102.6 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 78/308 (25%), Positives = 145/308 (47%)
Query: 170 VISGHLGWVRSVA---FDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLA-- 224
++ +G R +A F ++ F +GS +K+W+ + GH ++V GL
Sbjct: 164 LMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWY 223
Query: 225 -------VSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
S+ + + D V W Q+ + GHL+ V + HP+ D L++
Sbjct: 224 PLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSA 283
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D+ R+WD+ T +++ GH + S+ +P V +G +D+ + WDLR GK+++
Sbjct: 284 SFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIM 343
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
L H + + AMA P A++SA++ +K ++L K H + ++++ + E
Sbjct: 344 VLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHT-IPAHSSLVSDVRYIES 402
Query: 397 GV---LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCE 453
GV +AT G +G + W+ N +++V G + +S D G R ++
Sbjct: 403 GVNRFIATSGYDGCVKLWN---PLNCSLIKSMV--GHEEK-----VMSVDGYGDRFISSG 452
Query: 454 ADKTIKMW 461
D+TIK+W
Sbjct: 453 YDRTIKLW 460
Score = 245 (91.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 57/231 (24%), Positives = 106/231 (45%)
Query: 184 DHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKC 243
D TG+AD T+ +W ++ T L L GH+ +V +A Y+ SA D +
Sbjct: 232 DSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRL 291
Query: 244 WDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNT 303
WD+ + GH G++ + P ++ +GG D++ R+WD+R+ I L H
Sbjct: 292 WDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQ 351
Query: 304 VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA-LHPTEDCFASAS 362
+ ++ P Q+ T S D T+K WDLR T+ H V + + + F + S
Sbjct: 352 IVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATS 411
Query: 363 AEN--IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNG-SLWF 410
+ +K +N + +M+ ++ +++ + +++G D LW+
Sbjct: 412 GYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGDR-FISSGYDRTIKLWY 461
Score = 191 (72.3 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 51/204 (25%), Positives = 84/204 (41%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ GHL V VAF S + + S D T ++WDV G L GH E + +A +
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGS 320
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ S G+D + WDL K I H+ + + P L T D ++WD+R
Sbjct: 321 LVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRK 380
Query: 291 KMQIFALAGHDNTVCSV--FTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ H + V V + + T +D +K W+ + ++ H++ V
Sbjct: 381 VSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKV-- 438
Query: 349 MALHPTEDCFASASAENIKKFNLP 372
M++ D F S+ + K P
Sbjct: 439 MSVDGYGDRFISSGYDRTIKLWYP 462
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 51/212 (24%), Positives = 90/212 (42%)
Query: 284 RVWDIRTKMQIFALAGHDNTV--------CSVFTRPTDP-QVVTGSHDSTIKFWDLRYGK 334
+VW+ ++ GH + V C + ++ + TG+ D+T+ W
Sbjct: 197 KVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQST 256
Query: 335 TMLTLTHHKKSVRAMALHPTEDCFASASAENI-KKFNLPKG-EFLHNMLSQQKTIINSMA 392
+L L H V +A HP+ D SAS + + +++ G E L M I S+A
Sbjct: 257 PLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELL--MQEGHSEGIFSIA 314
Query: 393 VNEEGVLATGGDNGSLW-FWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVT 451
+G L + G N ++ WD +SG + ++ I A+++ G +L T
Sbjct: 315 CQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQ--------IVAMAWSPNGYQLAT 366
Query: 452 CEADKTIKMWREDETATPETHPLNFKPPKDIR 483
AD T+K+W + + T P + D+R
Sbjct: 367 SSADDTVKIWDLRKVSLAHTIPAHSSLVSDVR 398
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGH---IEQVRG 222
K V+ H+ + ++A+ + T SAD T+KIWD+ K +L T+ H + VR
Sbjct: 340 KSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRY 399
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
+ S + ++ ++G D VK W+ +I+S GH V + + D ++ G D
Sbjct: 400 IE-SGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYG--DRFISSGYDRT 456
Query: 283 CRVW 286
++W
Sbjct: 457 IKLW 460
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 259 (96.2 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 80/318 (25%), Positives = 149/318 (46%)
Query: 153 PSKWPR-PEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL 211
P PR PE P K + + G VR+V F+ + T +D+T+K+W+ +GTL
Sbjct: 4 PEPKPRAPE--LPRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLR 61
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
T +GH +V A S ++++ S G DK V WD+ +V+R + GH V + +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 272 DILLTGGRDSVCRVWDIRTKMQ--IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWD 329
++L+G DS R WD R++ + L + + SV + +D +++ GS D ++ +D
Sbjct: 122 TVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSV--KVSDHEILAGSVDGRVRRYD 179
Query: 330 LRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ--QKT 386
LR G+ +T + + C +S ++ ++ + GE L + QK
Sbjct: 180 LRMGQ--VTSDYVGSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKY 237
Query: 387 IINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
++ + + + ++G ++FWD G + + P + S + +L+Y
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWDLVEG-----SLALALP--VGSNV-VQSLAYHPAD 289
Query: 447 SRLVTCEADKTIKMWRED 464
L+T +I+ WRE+
Sbjct: 290 PCLLTAMGG-SIQYWREE 306
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 258 (95.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 81/318 (25%), Positives = 147/318 (46%)
Query: 153 PSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT 212
P PRP P K + + G VR+V F+ + T +D+T+K+W+ +GTL T
Sbjct: 4 PEPKPRPP-ELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRT 62
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID 272
+GH +V A S ++ + S G DK V WD+ +V+R + GH V + +
Sbjct: 63 YSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEAT 122
Query: 273 ILLTGGRDSVCRVWDIRTKMQ--IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
++L+G DS R WD R++ + L + V SV + +D +++ GS D ++ +DL
Sbjct: 123 VILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSV--KVSDHEILAGSVDGRVRRYDL 180
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFL--HNMLSQQKTI 387
R G+ L + + C +S ++ ++ + GE L + Q+
Sbjct: 181 RMGQ--LFSDYVGSPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYK 238
Query: 388 INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQP-GSLDSEAGIYALSYDVTG 446
++ + + + ++G ++FWD G A + P GS + +L+Y T
Sbjct: 239 LDCCLSERDTHVVSCSEDGKVFFWDLVEG-----ALALALPVGS----GVVQSLAYHPTE 289
Query: 447 SRLVTCEADKTIKMWRED 464
L+T +++ WRE+
Sbjct: 290 PCLLTAMGG-SVQCWREE 306
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 274 (101.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 67/249 (26%), Positives = 114/249 (45%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+ + GH V+SVAF + +GS+D TIK+W+ A +LK T+ GH ++V +A S
Sbjct: 77 QTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN 136
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
G + W+ + + GH V + P +L +G + ++WD
Sbjct: 137 -------G-----QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDS 184
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
T L GH N V + P + +GS+D+TIK WD G TL H + +
Sbjct: 185 ATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIES 244
Query: 349 MALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGS 407
+A P AS S++ IK ++ G F H + +++ + + +L +G + +
Sbjct: 245 LAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNT 304
Query: 408 LWFWDWKSG 416
+ WD +G
Sbjct: 305 IKLWDPATG 313
Score = 263 (97.6 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 75/268 (27%), Positives = 112/268 (41%)
Query: 152 IPSKWPRPEWHAPWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK 210
+ S RP+ W + + GH W+ +V F +GS D TIK+WD A G LK
Sbjct: 17 LQSTLQRPKVEDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK 76
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
TL GH V+ +A S + S D +K W+ + + + GH V + P
Sbjct: 77 QTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN 136
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
G+ +W+ + GH + V SV P + +GS + TIK WD
Sbjct: 137 -------GQ-----LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDS 184
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIIN 389
TL H V + P AS S + IK ++ P G H L I
Sbjct: 185 ATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHT-LEGHSNKIE 243
Query: 390 SMAVNEEG-VLATGGDNGSLWFWDWKSG 416
S+A + G +LA+G + ++ WD +G
Sbjct: 244 SLAFSPNGQLLASGSSDATIKLWDTATG 271
Score = 218 (81.8 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 54/182 (29%), Positives = 84/182 (46%)
Query: 200 KIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHL 259
++W+ A G+LK T+ GH + V +A S + S +K +K WD + + GH
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTG 319
+ V L P +L +G D+ ++WD + L GH N + S+ P + +G
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASG 257
Query: 320 SHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLH 378
S D+TIK WD G TL H V ++ P S S +N IK ++ G H
Sbjct: 258 SSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKH 317
Query: 379 NM 380
+M
Sbjct: 318 SM 319
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ GH WV + F +GS D TIK+WD G+LK TL GH ++ LA S
Sbjct: 193 LGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ 252
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ S D +K WD + GH V + P +L +G D+ ++WD T
Sbjct: 253 LLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPAT 312
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
+ ++ V S+ PQ++T +I+ W Y
Sbjct: 313 GILKHSMRT-PGIVRSIEFSIELPQLITNLGTFSIQAWHTGY 353
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 265 (98.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 62/195 (31%), Positives = 90/195 (46%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
V H VRSV F F T S D+T+K+W + +L+ HI VR S
Sbjct: 60 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ SA DDK VK WD + + SY H V + HP+ + G D+ +VWD+R
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T + H V + P+ ++T S DST+K DL G+ + TL H+ +
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 239
Query: 350 ALHPTEDCFASASAE 364
A T + FAS ++
Sbjct: 240 AFSRTGEYFASGGSD 254
Score = 191 (72.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 43/159 (27%), Positives = 73/159 (45%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+S H+ WVR F + S D+T+K+WD + + H V + T
Sbjct: 103 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT 162
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +AG D VK WD+ +++++ Y H + V L HP+ + L+T DS ++ D+
Sbjct: 163 CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 222
Query: 291 KMQIFALAGHDNTVCSV-FTRPTDPQVVTGSHDSTIKFW 328
++ L GH +V F+R T +G D + W
Sbjct: 223 GRLLYTLHGHQGPATTVAFSR-TGEYFASGGSDEQVMVW 260
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 57/273 (20%), Positives = 107/273 (39%)
Query: 196 DRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSY 255
D + +W + + TGH + V + S + S DK V+ W +
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 256 HGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDP 314
H + V + +T D +VW + +F+L+ H N V C+ F+ P
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFS-PDGR 120
Query: 315 QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPK 373
+V+ S D T+K WD + + + H V + HP+ C A+A +N +K +++
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 180
Query: 374 GEFL-HNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSL 431
L H L +N ++ + G L T + +L D G P +
Sbjct: 181 HRLLQHYQL--HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT- 237
Query: 432 DSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
+++ TG + +D+ + +W+ +
Sbjct: 238 -------TVAFSRTGEYFASGGSDEQVMVWKSN 263
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 34/121 (28%), Positives = 50/121 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C H G+V V F S T D T+K+WDV L H V GL+
Sbjct: 140 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF 199
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
Y+ +A D +K DL + +++ + HGH + T + +GG D V
Sbjct: 200 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 259
Query: 286 W 286
W
Sbjct: 260 W 260
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 256 (95.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 54/187 (28%), Positives = 87/187 (46%)
Query: 171 ISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
I H V S+ S TG D + +W + K ++LTGH V + +++
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 79
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ + ++ WDLE K++R+ GH + + L HP + + +G +D+ ++WDIR
Sbjct: 80 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 139
Query: 290 TKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
K +F GH V C F+ P + + + D T+K WDL GK M H V
Sbjct: 140 RKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV 198
Query: 349 MALHPTE 355
+ HP E
Sbjct: 199 VEFHPNE 205
Score = 202 (76.2 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 213 LTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
+ H V L + + + + GDD +V W + + I S GH S V + L+
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 79
Query: 272 DILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
++++ G + RVWD+ + L GH +CS+ P V +GS D+ IK WD+R
Sbjct: 80 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 139
Query: 332 YGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFL 377
+ H ++VR + P ASA+ ++ +K ++L G+ +
Sbjct: 140 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 186
Score = 169 (64.5 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 52/164 (31%), Positives = 79/164 (48%)
Query: 258 HLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
H S V L L LL TGG D +W I I +L GH + V SV + +
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 82
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLP-KG 374
V GS +I+ WDL K + TL HK ++ ++ HP + AS S + NIK +++ KG
Sbjct: 83 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 142
Query: 375 -EFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSG 416
F + SQ + + + +G LA+ D+ ++ WD +G
Sbjct: 143 CVFRYRGHSQA---VRCLRFSPDGKWLASAADDHTVKLWDLTAG 183
Score = 167 (63.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/147 (25%), Positives = 58/147 (39%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C ++GH V SV + GS +I++WD+ + TL GH + L
Sbjct: 59 CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH 118
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
++ S D +K WD+ + + Y GH V CL P L + D ++W
Sbjct: 119 PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 178
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTD 313
D+ + GH V V P +
Sbjct: 179 DLTAGKMMSEFPGHTGPVNVVEFHPNE 205
Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K R + GH + S+ F + +GS D IK+WD+ + GH + VR L
Sbjct: 100 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 159
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHP 269
S ++ SA DD VK WDL K++ + GH V + HP
Sbjct: 160 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 203
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 256 (95.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 78/304 (25%), Positives = 132/304 (43%)
Query: 171 ISGHLGWVRSVAFDHSNT-WFCTGSADRTIKIW-----DVAKGTLKLTLTGHIEQVRGLA 224
+ GH GWV S++ N +GS D++I +W DV G + LTGH V A
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 225 VSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
+S Y SA DK ++ WDLE+ + + GH S V + + P +++G RD +
Sbjct: 71 LSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIK 130
Query: 285 VWDI--RTKMQIFALAGHDNTV-CSVFT-RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLT 340
+W+I K I GH + V C F+ P + V+ D +K WDL +
Sbjct: 131 IWNIIGNCKYTITD-GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHY 189
Query: 341 HHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL 399
H V A+ + P AS + + ++L + L+++ + K IN++ +
Sbjct: 190 GHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSL--EAKANINALVFSPNRYW 247
Query: 400 ATGGDNGSLWFWDWKSGHNFQQAQT-IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTI 458
S+ +D ++ + V G SE +L++ G L + D I
Sbjct: 248 LCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLI 307
Query: 459 KMWR 462
++W+
Sbjct: 308 RVWQ 311
Score = 237 (88.5 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 63/248 (25%), Positives = 107/248 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R ++GH +V A + + + S D+TI++WD+ KG GH V +++S
Sbjct: 57 RRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPD 116
Query: 229 HTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHPTIDIL--LTGGRDSVCRV 285
+ + S DK +K W++ N K + GH V C+ P D L ++ G D +V
Sbjct: 117 NRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKV 176
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD+ T + GH V +V P +G D T+ WDL + +L K +
Sbjct: 177 WDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSL-EAKAN 235
Query: 346 VRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDN 405
+ A+ P +A+ +I+ F+L E + L+ + + E + T +
Sbjct: 236 INALVFSPNRYWLCAATGSSIRIFDLETQEKVDE-LTVDFVGVGKKSSEPECISLTWSPD 294
Query: 406 GSLWFWDW 413
G F W
Sbjct: 295 GQTLFSGW 302
Score = 205 (77.2 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 56/179 (31%), Positives = 86/179 (48%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLT--GHIEQVRGL 223
+C GH V SV+ N +GS D+TIKIW++ G K T+T GH + V +
Sbjct: 96 ECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNII-GNCKYTITDGGHSDWVSCV 154
Query: 224 AVSSK--HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDS 281
S + SAG DK VK WDLE + S++GH V + + P + +GGRD
Sbjct: 155 RFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDG 214
Query: 282 VCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLT 340
+WD+ +++L N VF+ P + + S+I+ +DL + + LT
Sbjct: 215 TLMLWDLNESTHLYSLEAKANINALVFS-PNRYWLCAAT-GSSIRIFDLETQEKVDELT 271
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 275 (101.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 72/245 (29%), Positives = 114/245 (46%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VRS+ + ++ W TG IK W +K+ T H E VR L+
Sbjct: 2 ILQAHDQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTD 61
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
S DD VK WD + + RS GH V + HPT +L++GG+D + ++WD +
Sbjct: 62 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAK 121
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ ++ + GH N V V V+T S D IK +D+R K + + H K V A+
Sbjct: 122 SGRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTAL 181
Query: 350 ALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQ-QKTIINSMAVNEEG-VLATGGDNG 406
A HP E+ F S S + L E ++ + +A + G +L +GG++
Sbjct: 182 AWHPFHEEYFVSGSYDGAIFHWLVGHETPQIEINNAHDNSVWDLAWHPVGYLLCSGGNDH 241
Query: 407 SLWFW 411
+ FW
Sbjct: 242 ATRFW 246
Score = 174 (66.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 43/163 (26%), Positives = 76/163 (46%)
Query: 169 RVISGHLGW-VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSS 227
R ++GH GW V+SV + + + +G D +K+WD G + GH V+ + +
Sbjct: 85 RSLTGH-GWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVKWNQ 143
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-ILLTGGRDSVCRVW 286
++ +A D+ +K +D+ K + S+ GH V L HP + ++G D W
Sbjct: 144 NGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHW 203
Query: 287 DIRTKM-QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ + QI HDN+V + P + +G +D +FW
Sbjct: 204 LVGHETPQIEINNAHDNSVWDLAWHPVGYLLCSGGNDHATRFW 246
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 57/254 (22%), Positives = 106/254 (41%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
+ L H + VR + S+ +M + D +K W N V + H V L T
Sbjct: 1 MILQAHDQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRT 60
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+ D+ +VWD + +L GH V SV PT +V+G D +K WD
Sbjct: 61 DLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDA 120
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KKFNLPKGEFLHNMLSQQKTIIN 389
+ G+ + + HK V+ + + + +AS + I K +++ + L + K +
Sbjct: 121 KSGRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDV-T 179
Query: 390 SMAVN--EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGS 447
++A + E +G +G+++ W GH Q + + D+ ++ L++ G
Sbjct: 180 ALAWHPFHEEYFVSGSYDGAIFHW--LVGHETPQIEI---NNAHDNS--VWDLAWHPVGY 232
Query: 448 RLVTCEADKTIKMW 461
L + D + W
Sbjct: 233 LLCSGGNDHATRFW 246
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 254 (94.5 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 23 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 76
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 77 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 136
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 137 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 197 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 253
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 254 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 312
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 313 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 191 (72.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 219 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 276
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 277 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 336
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 337 QTVKVWECR 345
Score = 152 (58.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 304
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 305 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 268 (99.4 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 63/195 (32%), Positives = 91/195 (46%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
V H VRSV F F T S D+T+K+W + +L+ HI VR S
Sbjct: 98 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDG 157
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ SA DDK VK WD + + SY H V + HP+ + G D+ +VWD+R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T + H V ++ P+ +VT S DST+K DL G+ + TL H+ +
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 350 ALHPTEDCFASASAE 364
A T + FAS ++
Sbjct: 278 AFSRTGEYFASGGSD 292
Score = 210 (79.0 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 66/256 (25%), Positives = 111/256 (43%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLG 266
+L+ GH + V + S + S D + W ++ Q + R + GH V C+
Sbjct: 10 SLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYR-FAGHKDAVTCVN 68
Query: 267 LHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
P+ +L +G RD R+W K + H TV SV VT S D T+K
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
W K + +L+ H VR P SAS + +K ++ E +H+ +
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC-EHG 187
Query: 386 TIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
+ + + G +A G + ++ WD ++ H ++Q L S A + ALS+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-HR------LLQHYQLHS-AAVNALSFHP 239
Query: 445 TGSRLVTCEADKTIKM 460
+G+ LVT +D T+K+
Sbjct: 240 SGNYLVTASSDSTLKI 255
Score = 192 (72.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+S H+ WVR F + S D+T+K+WD + H V + T
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +AG D VK WD+ +++++ Y H + V L HP+ + L+T DS ++ D+
Sbjct: 201 CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLME 260
Query: 291 KMQIFALAGHDNTVCSV-FTRPTDPQVVTGSHDSTIKFW 328
++ L GH +V F+R T +G D + W
Sbjct: 261 GRLLYTLHGHQGPATTVAFSR-TGEYFASGGSDEQVMVW 298
Score = 147 (56.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 45/217 (20%), Positives = 92/217 (42%)
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
E + R + GH V + L +G DS VW ++ + + + AGH + V
Sbjct: 7 EDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTC 66
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN- 365
V P+ + +GS D T++ W H +VR++ F +AS +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQT 424
+K ++ + +FL + LSQ + + +G ++ + D+ ++ WD K+ + +
Sbjct: 127 VKVWSTHRQKFLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSR--ECVHS 182
Query: 425 IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ G + + + +G+ + D T+K+W
Sbjct: 183 YCEHGGF-----VTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/121 (27%), Positives = 49/121 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C H G+V V F S T D T+K+WDV L H V L+
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 237
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
Y+ +A D +K DL + +++ + HGH + T + +GG D V
Sbjct: 238 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 286 W 286
W
Sbjct: 298 W 298
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 253 (94.1 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 68/310 (21%), Positives = 140/310 (45%)
Query: 164 PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT-----LTGHIE 218
P+ + ++ H V SV F + SAD+TI+ + + + TGH
Sbjct: 13 PYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHEN 72
Query: 219 QVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ +A SS ++ SA DDK +K WD+E +I++ GH + +C+ +P +++++G
Sbjct: 73 GISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGS 132
Query: 279 RDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D R+WD+ T + L H + V +V +V+ S+D + WD G + T
Sbjct: 133 FDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 339 LTHHKKS-VRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNM---LSQQKTIINSMAV 393
L + V + P + +N ++ +N+ +FL ++ Q I ++ +V
Sbjct: 193 LIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSV 252
Query: 394 NEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCE 453
+ +G ++ + W+ S Q+ + G ++ + ++ T + + +
Sbjct: 253 TNGKRIVSGSEDNCVHMWELNSKKLLQKLE-----GHTET---VMNVACHPTENLIASGS 304
Query: 454 ADKTIKMWRE 463
DKT+++W +
Sbjct: 305 LDKTVRIWTQ 314
Score = 230 (86.0 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 60/249 (24%), Positives = 112/249 (44%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY 231
+GH + VAF + + S D+T+K+WDV G+L TL GH + + +
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNM 127
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ S D+ V+ WD+ K ++ H V + + ++++ D +CR+WD T
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTG 187
Query: 292 MQIFALAGHDNTVCSVFTR--PTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ L +N S F R P ++ G+ D+T++ W++ K + T T H + +
Sbjct: 188 HCVKTLIDDENPPVS-FVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI 246
Query: 350 --ALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDN 405
A T S S +N + + L + L + +T++N E ++A+G +
Sbjct: 247 SSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLD 306
Query: 406 GSLWFWDWK 414
++ W K
Sbjct: 307 KTVRIWTQK 315
Score = 215 (80.7 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 53/211 (25%), Positives = 93/211 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+ + GH + V F+ + +GS D T++IWDV G L H + V + +
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSY-HGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
+ + S+ D + WD +++ V + P +L G D+ R+W+
Sbjct: 167 GSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWN 226
Query: 288 IRTKMQIFALAGHDNT---VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
I + + GH N + S F+ ++V+GS D+ + W+L K + L H +
Sbjct: 227 ISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTE 286
Query: 345 SVRAMALHPTEDCFASASAENIKKFNLPKGE 375
+V +A HPTE+ AS S + + K E
Sbjct: 287 TVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 253 (94.1 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 83/319 (26%), Positives = 147/319 (46%)
Query: 153 PSKWPR-PEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL 211
P PR PE P K + + G VR+V F+ + T +D+T+K+W+ +GTL
Sbjct: 4 PEPKPRGPE--LPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLR 61
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
T +GH +V A S ++ + S G DK V WD+ +V+R + GH V + +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 272 DILLTGGRDSVCRVWDIRTKMQ--IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWD 329
++L+G DS R WD R++ + L + + SV + +D +V++GS D ++ +D
Sbjct: 122 TVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSV--KVSDHEVLSGSVDGRVRRYD 179
Query: 330 LRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ--QKT 386
LR G+ L + + C +S ++ ++ + GE L Q+
Sbjct: 180 LRMGQ--LFSDYVGSPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEY 237
Query: 387 IINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI-VQPGSLDSEAGIYALSYDVT 445
++ + + + ++G ++FWD G A + V PG + S L+Y T
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVYFWDLVEG---ALALALPVGPGVVQS------LAYHPT 288
Query: 446 GSRLVTCEADKTIKMWRED 464
L+T ++ WRE+
Sbjct: 289 EPCLLTAMGG-SVHCWREE 306
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 286 (105.7 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 77/274 (28%), Positives = 129/274 (47%)
Query: 161 WHAP-WKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A KC R + GH G V S S +GS DRT+K+WD+ G TL GH
Sbjct: 1020 WSAVNGKCLRTLVGHTGGVWSSQM--SGNIIISGSTDRTLKVWDMDSGACVHTLQGHTST 1077
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR + + + S D ++ WD+EQ + GHL+ V C+ + +++G
Sbjct: 1078 VRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKL--IVSGAY 1133
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D + ++W + + L GH N V S+ + VV+GS D++I+ WD+ G TL
Sbjct: 1134 DYMVKIWHPERQECLHTLQGHTNRVYSL--QFDGLHVVSGSLDTSIRVWDVETGNCKHTL 1191
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK--TIINSMAVNEE 396
H+ M L ++ S +A++ +K +++ G+ L + K + + + N
Sbjct: 1192 MGHQSLTSGMELR--QNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSR 1249
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
V+ T D+G++ WD K+G + + GS
Sbjct: 1250 FVV-TSSDDGTVKLWDVKTGDFIRNLVALDSGGS 1282
Score = 264 (98.0 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 77/302 (25%), Positives = 135/302 (44%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W + P + +V+ GH V + S +GS D T+K+W G TL GH
Sbjct: 979 WRSRPVRKPKVLKGHDDHVIT-CLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGG 1037
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V +S + S D+ +K WD++ + + GH S V C+ LH + +++G R
Sbjct: 1038 VWSSQMSGN--IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK--VVSGSR 1093
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D+ RVWDI + L GH V V + +V+G++D +K W + + TL
Sbjct: 1094 DATLRVWDIEQGSCLHVLVGHLAAVRCV--QYDGKLIVSGAYDYMVKIWHPERQECLHTL 1151
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL 399
H V ++ S +I+ +++ G H ++ Q ++ + M + + +L
Sbjct: 1152 QGHTNRVYSLQFDGLHVVSGSLDT-SIRVWDVETGNCKHTLMGHQ-SLTSGMELRQN-IL 1208
Query: 400 ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIK 459
+G + ++ WD +G Q QT+ P S + L ++ +VT D T+K
Sbjct: 1209 VSGNADSTVKVWDITTG---QCLQTLSGPNKHHS--AVTCLQFN--SRFVVTSSDDGTVK 1261
Query: 460 MW 461
+W
Sbjct: 1262 LW 1263
Score = 38 (18.4 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 96 GSRDAQKAGAQNALVVGPSA 115
GS+ +Q++G + P+A
Sbjct: 539 GSQTSQESGCSRTTAINPTA 558
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 266 (98.7 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 68/256 (26%), Positives = 118/256 (46%)
Query: 161 WHA-PW-KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIW-DVAKGTLKLTLTGHI 217
WH P + YR +GH V V F S +GS D+T++IW KG H
Sbjct: 46 WHMKPQSRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGE-STVFRAHT 103
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
VR + S + +A DDK VK W + K + S H++ V C P ++++
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSA 163
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D ++WD ++ + + H V V P+ + S D+T+K WD+R + +
Sbjct: 164 SDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQ 223
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H +V A++ HP+ + +AS+++ +K +L +G L+ + Q ++A +
Sbjct: 224 HYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPA-TTVAFSRT 282
Query: 397 G-VLATGGDNGSLWFW 411
G A+GG + + W
Sbjct: 283 GEYFASGGSDEQVMVW 298
Score = 203 (76.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 63/256 (24%), Positives = 112/256 (43%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLG 266
+L+ GH + + + S + S D + W ++ Q++ R + GH V C+
Sbjct: 10 SLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYR-FAGHKDAVTCVN 68
Query: 267 LHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
P+ +L +G RD R+W K + H TV SV +VT S D T+K
Sbjct: 69 FSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
W K + +L+ H VR P SAS + +K ++ E +H+ +
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC-EHG 187
Query: 386 TIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
+ + + G +A + ++ WD ++ H ++Q L S A + ALS+
Sbjct: 188 GFVTYVDFHPSGTCIAAASMDNTVKVWDVRT-HR------LLQHYQLHS-AAVNALSFHP 239
Query: 445 TGSRLVTCEADKTIKM 460
+G+ L+T +D T+K+
Sbjct: 240 SGNYLLTASSDSTLKI 255
Score = 200 (75.5 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 66/300 (22%), Positives = 120/300 (40%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + SV F + +GS D + +W + + GH + V + S
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ S DK V+ W + H + V + L+T D +VW
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ +F+L+ H N V C+ F+ P +V+ S D T+K WD + + + H V
Sbjct: 133 HRQKFLFSLSQHINWVRCARFS-PDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPKGEFL-HNMLSQQKTIINSMAVNEEG-VLATGGD 404
+ HP+ C A+AS +N +K +++ L H L +N+++ + G L T
Sbjct: 192 YVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQL--HSAAVNALSFHPSGNYLLTASS 249
Query: 405 NGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
+ +L D G P + +++ TG + +D+ + +W+ +
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPAT--------TVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/217 (19%), Positives = 91/217 (41%)
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
E + R + GH + + L +G DS VW ++ + + + AGH + V
Sbjct: 7 EDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTC 66
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN- 365
V P+ + +GS D T++ W H +VR++ +AS +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQT 424
+K ++ + +FL + LSQ + + +G ++ + D+ ++ WD K+ + +
Sbjct: 127 VKVWSTHRQKFLFS-LSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-KTSR--ECVHS 182
Query: 425 IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ G + + + +G+ + D T+K+W
Sbjct: 183 YCEHGGF-----VTYVDFHPSGTCIAAASMDNTVKVW 214
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 265 (98.3 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 62/195 (31%), Positives = 90/195 (46%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
V H VRSV F F T S D+T+K+W + +L+ HI VR S
Sbjct: 98 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 157
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ SA DDK VK WD + + SY H V + HP+ + G D+ +VWD+R
Sbjct: 158 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T + H V + P+ ++T S DST+K DL G+ + TL H+ +
Sbjct: 218 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 350 ALHPTEDCFASASAE 364
A T + FAS ++
Sbjct: 278 AFSRTGEYFASGGSD 292
Score = 201 (75.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 64/256 (25%), Positives = 111/256 (43%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLG 266
+L+ GH + V + S + S D + W ++ Q++ R + GH V C+
Sbjct: 10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVN 68
Query: 267 LHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
P+ +L +G RD R+W K + H TV SV VT S D T+K
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
W K + +L+ H VR P SAS + +K ++ E +H+ +
Sbjct: 129 VWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYC-EHG 187
Query: 386 TIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
+ + + G +A G + ++ WD ++ H ++Q L S A + LS+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-HR------LLQHYQLHS-AAVNGLSFHP 239
Query: 445 TGSRLVTCEADKTIKM 460
+G+ L+T +D T+K+
Sbjct: 240 SGNYLITASSDSTLKI 255
Score = 191 (72.3 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 43/159 (27%), Positives = 73/159 (45%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+S H+ WVR F + S D+T+K+WD + + H V + T
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +AG D VK WD+ +++++ Y H + V L HP+ + L+T DS ++ D+
Sbjct: 201 CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 260
Query: 291 KMQIFALAGHDNTVCSV-FTRPTDPQVVTGSHDSTIKFW 328
++ L GH +V F+R T +G D + W
Sbjct: 261 GRLLYTLHGHQGPATTVAFSR-TGEYFASGGSDEQVMVW 298
Score = 153 (58.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 46/217 (21%), Positives = 91/217 (41%)
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
E + R + GH V C+ L +G DS VW ++ + + + GH + V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 66
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN- 365
V P+ + +GS D T++ W H +VR++ F +AS +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQT 424
+K + + +FL + LSQ + + +G ++ + D+ ++ WD KS + +
Sbjct: 127 VKVWATHRQKFLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSR--ECVHS 182
Query: 425 IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ G + + + +G+ + D T+K+W
Sbjct: 183 YCEHGGF-----VTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 34/121 (28%), Positives = 50/121 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C H G+V V F S T D T+K+WDV L H V GL+
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF 237
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
Y+ +A D +K DL + +++ + HGH + T + +GG D V
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 286 W 286
W
Sbjct: 298 W 298
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 273 (101.2 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 57/207 (27%), Positives = 100/207 (48%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+ + GH G V S +F N + +GS D+T+++W + T ++ GH V ++ S
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y +A D+ + W + +R + GHL+ V C+ HP + TG D CR+WD+
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH-KKSVR 347
T + GH V S+ P + TGS D I WD+ GK + + H K ++
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY 698
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPK 373
+++ + S A++ ++ ++L K
Sbjct: 699 SLSYSKEGNVLISGGADHTVRVWDLKK 725
Score = 229 (85.7 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 61/233 (26%), Positives = 105/233 (45%)
Query: 245 DLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV 304
D +++ ++ GH VY P LL+G D R+W + T + + GH++ V
Sbjct: 511 DKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPV 570
Query: 305 CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDC--FASAS 362
V P T SHD T + W + + H V ++ HP C F +S
Sbjct: 571 WDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPN-GCYVFTGSS 629
Query: 363 AENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQ 421
+ + +++ G+ + L +I S+AV +G L+TG ++G + WD +G +Q
Sbjct: 630 DKTCRMWDVSTGDSVRLFLGHTAPVI-SIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQ 688
Query: 422 AQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR-EDETATPETHP 473
+ G + IY+LSY G+ L++ AD T+++W + T P P
Sbjct: 689 MR-----GH--GKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEP 734
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 269 (99.8 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 58/209 (27%), Positives = 92/209 (44%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + GHL + VAF S + T S D+T ++WD+ G L GH V
Sbjct: 325 WKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSV 384
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
G+A S G D + WDL + I + GH+ V+ + P L +GG D
Sbjct: 385 YGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGED 444
Query: 281 SVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTL 339
+ CR+WD+R + ++ + H N V V P + + T S+D + W R + +L
Sbjct: 445 NQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSL 504
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKK 368
H+ V ++ + C A+ S + K
Sbjct: 505 AGHESKVASLDITADSSCIATVSHDRTIK 533
Score = 217 (81.4 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 69/298 (23%), Positives = 128/298 (42%)
Query: 182 AFDHSNTWFCTGSADRTIKIWDVAKGTLKLT-LTGHIEQVRGLAVSSKHTYMFSAGDDKQ 240
+F T S K+W++ + T + L H E+ + S + +A D+
Sbjct: 262 SFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRT 321
Query: 241 VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGH 300
K W + +++++ GHL + + HP+ L T D R+WDI T ++ GH
Sbjct: 322 AKLWKTD-GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGH 380
Query: 301 DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS 360
+V + + + DS + WDLR G+++L H K V ++ P AS
Sbjct: 381 SRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLAS 440
Query: 361 ASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVN-EEGV-LATGGDNGSLWFWDWKSGH 417
+N + ++L + L+ ++ +++ + +EG LAT + + W SG
Sbjct: 441 GGEDNQCRIWDLRMRKSLY-IIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW---SGR 496
Query: 418 NFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW----REDETATPET 471
+F +++ E+ + +L S + T D+TIK+W +DE ET
Sbjct: 497 DFSLVKSLA-----GHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKET 549
Score = 182 (69.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 45/157 (28%), Positives = 66/157 (42%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYM 232
GH V +AF + D ++WD+ G L GHI+ V + S ++
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 233 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILL-TGGRDSVCRVWDIRTK 291
S G+D Q + WDL K + H + V + P L T D +W R
Sbjct: 439 ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDF 498
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ +LAGH++ V S+ + T SHD TIK W
Sbjct: 499 SLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 271 (100.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 61/224 (27%), Positives = 102/224 (45%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG D + +W + K L+L GH + + + + + +K WDLE+ KV
Sbjct: 34 TGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKV 93
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+R+ GH S + HP + +G D+ ++WDIR K I GH V + P
Sbjct: 94 VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKF-N 370
+V+G D+ +K WDL GK + H+ ++++ HP E A+ SA+ KF +
Sbjct: 154 DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 213
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWK 414
L E + + + T + + N +G G SL + W+
Sbjct: 214 LETFELIGSG-GTETTGVRCLTFNPDGKSVLCGLQESLKIFSWE 256
Score = 261 (96.9 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 69/243 (28%), Positives = 112/243 (46%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK-HTY 231
GH + SV FD S G+A TIK+WD+ + + TLTGH R VS H +
Sbjct: 57 GHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGH----RSNCVSVNFHPF 112
Query: 232 --MFSAGD-DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
F++G D +K WD+ + I +Y GH GV L P +++GG D+V +VWD+
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ H+ + S+ P + + TGS D T+KFWDL + + + VR
Sbjct: 173 TAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRC 232
Query: 349 MALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSL 408
+ +P E++K F+ H+ + + ++ M V+E +L + +
Sbjct: 233 LTFNPDGKSVLCGLQESLKIFSWEPIR-CHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCV 291
Query: 409 WFW 411
W
Sbjct: 292 GVW 294
Score = 219 (82.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 62/259 (23%), Positives = 116/259 (44%)
Query: 206 KGTLKLT-LTGHIEQVRGLAVSSKHT-YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY 263
K KL H V L + K + + + G+D +V W + + I S +GH SG+
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 264 CLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDS 323
+ + ++ G ++WD+ + L GH + SV P +GS D+
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 324 TIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLS 382
+K WD+R + T H + V + P S +N+ K ++L G+ LH S
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS 183
Query: 383 QQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSY 442
+ I + E +LATG + ++ FWD ++ F+ ++ G ++ G+ L++
Sbjct: 184 HEGKIQSLDFHPHEFLLATGSADKTVKFWDLET---FE----LIGSGGTET-TGVRCLTF 235
Query: 443 DVTGSRLVTCEADKTIKMW 461
+ G + V C +++K++
Sbjct: 236 NPDG-KSVLCGLQESLKIF 253
Score = 209 (78.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 50/166 (30%), Positives = 73/166 (43%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K R ++GH SV F +F +GS D +KIWD+ K T GH V L
Sbjct: 92 KVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 151
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
+ ++ S G+D VK WDL K++ + H + L HP +L TG D +
Sbjct: 152 TPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKF 211
Query: 286 WDIRTKMQIFALAGHDNTVCSVFT-RPTDPQVVTGSHDSTIKF-WD 329
WD+ T ++ G + T T P V+ G +S F W+
Sbjct: 212 WDLET-FELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWE 256
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 247 (92.0 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 57/225 (25%), Positives = 105/225 (46%)
Query: 163 APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
+P K +R + GH +V+ V H + +GS D T+++WD+ KG GH + V
Sbjct: 58 SPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMS 117
Query: 223 LAVSSKHTYMFSAGDDKQVKCWD-LEQNK-VIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
+A SS + + S D +K W+ L + K + H V C+ P +++G D
Sbjct: 118 VAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWD 177
Query: 281 SVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLT 340
+ ++WDI++ L H V +V P +G D+ W+L GK + L
Sbjct: 178 NKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKL- 236
Query: 341 HHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQK 385
+ ++ A+A P + ++A+ + I ++L + L ++ + K
Sbjct: 237 EARNTINALAFSPNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVK 281
Score = 234 (87.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 61/251 (24%), Positives = 111/251 (44%)
Query: 173 GHLGWVRSVAFDHSNT-WFCTGSADRTIKIWDV------AKGTLKLTLTGHIEQVRGLAV 225
GH G+V S+A N + S D+T+ +W + + G +L GH V+ + +
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
S + S D ++ WD+ + R + GH V + +++G RD+ +V
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKV 138
Query: 286 WDIRTKMQIFALAG---HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
W+ + + F L G H + V + P P +V+GS D+ +K WD++ K TLT H
Sbjct: 139 WNTLGECK-FTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDH 197
Query: 343 KKSVRAMALHPTEDCFASASAENIK-KFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
V + + P AS + + L G+ L+ + + + IN++A + +
Sbjct: 198 TGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKL--EARNTINALAFSPNKYWLS 255
Query: 402 GGDNGSLWFWD 412
+ + WD
Sbjct: 256 AATDDKIIIWD 266
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 247 (92.0 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 79/318 (24%), Positives = 145/318 (45%)
Query: 153 PSKWPR-PEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL 211
P PR PE P K + + G VR+V F+ + T +D+T+K+W+ +GTL
Sbjct: 4 PEPKPRGPE--LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLR 61
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
T +GH +V A S ++ + S G DK V WD+ +V+R + GH V + +
Sbjct: 62 TYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEA 121
Query: 272 DILLTGGRDSVCRVWDIRTKMQ--IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWD 329
++L+G DS R WD R++ + L + + SV + +D +V+ GS D ++ +D
Sbjct: 122 TVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSV--KVSDHEVLAGSVDGRVRRYD 179
Query: 330 LRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ--QKT 386
LR G+ L + + C +S ++ ++ + GE L Q+
Sbjct: 180 LRMGQ--LFSDYVGSPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEY 237
Query: 387 IINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
++ + + + ++G ++FWD G + P + + +L+Y T
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWDLVEG-----VLVLALPVG---PSVVQSLAYHPTE 289
Query: 447 SRLVTCEADKTIKMWRED 464
L+T +++ WRE+
Sbjct: 290 PCLLTAMGG-SVQCWREE 306
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 262 (97.3 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 63/195 (32%), Positives = 89/195 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
V H VRSV F T S D+T+K+W + +LT HI VR S
Sbjct: 98 VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG 157
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ SA DDK VK WD + I SY H V + HP+ + G D+ +VWD R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDAR 217
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T + H V ++ P+ ++T S DST+K DL G+ + TL H+ +
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 350 ALHPTEDCFASASAE 364
A T + FAS ++
Sbjct: 278 AFSRTGEYFASGGSD 292
Score = 216 (81.1 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 65/256 (25%), Positives = 114/256 (44%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLG 266
+L+ GH + V + S ++ S D + W ++ Q++ R + GH V C+
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVN 68
Query: 267 LHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
P+ +L +G RD R+W K + H TV SV +VT S D T+K
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
W + + +LT H VR P SAS + +K ++ E +H+ +
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYC-EHG 187
Query: 386 TIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
+ + + G +A G + ++ WD ++ H ++Q L S A + ALS+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDART-HR------LLQHYQLHS-AAVNALSFHP 239
Query: 445 TGSRLVTCEADKTIKM 460
+G+ L+T +D T+K+
Sbjct: 240 SGNYLITASSDSTLKI 255
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 42/159 (26%), Positives = 71/159 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++ H+ WVR F + S D+T+K+WD + H V + T
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGT 200
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +AG D VK WD +++++ Y H + V L HP+ + L+T DS ++ D+
Sbjct: 201 CIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLME 260
Query: 291 KMQIFALAGHDNTVCSV-FTRPTDPQVVTGSHDSTIKFW 328
++ L GH +V F+R T +G D + W
Sbjct: 261 GRLLYTLHGHQGPATTVAFSR-TGEYFASGGSDEQVMVW 298
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/217 (19%), Positives = 90/217 (41%)
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
E + R + GH V C+ L +G DS +W ++ + + + GH + V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN- 365
V P+ + +GS D T++ W H +VR++ +AS +
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQT 424
+K ++ + FL + L+Q + + +G ++ + D+ ++ WD K+ + +
Sbjct: 127 VKVWSTHRQRFLFS-LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSR--ECIHS 182
Query: 425 IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ G + + + +G+ + D T+K+W
Sbjct: 183 YCEHGGF-----VTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C H G+V V F S T D T+K+WD L H V L+
Sbjct: 178 ECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSF 237
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
Y+ +A D +K DL + +++ + HGH + T + +GG D V
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 286 W 286
W
Sbjct: 298 W 298
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 270 (100.1 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 60/224 (26%), Positives = 102/224 (45%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG D + +W + K L+L GH + + + + + +K WDLE+ K+
Sbjct: 34 TGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKI 93
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+R+ GH S + HP + +G D+ ++WDIR K I GH V + P
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKF-N 370
VV+G D+ +K WDL GK + H+ ++++ HP E A+ SA+ KF +
Sbjct: 154 DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWK 414
L E + + + + ++ N +G G SL + W+
Sbjct: 214 LETFELIGSG-GPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256
Score = 259 (96.2 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 67/243 (27%), Positives = 113/243 (46%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK-HTY 231
GH + SV FD S G+A TIK+WD+ + + TLTGH R +S H +
Sbjct: 57 GHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH----RSNCISVDFHPF 112
Query: 232 --MFSAGD-DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
F++G D +K WD+ + I +Y GH GV L P +++GG D++ +VWD+
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ H+ + S+ P + + TGS D T+KFWDL + + + VR
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRC 232
Query: 349 MALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSL 408
++ +P E++K F+ H+ + + ++ M V+E +L + +
Sbjct: 233 LSFNPDGKTVLCGLQESLKIFSWEPIR-CHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCV 291
Query: 409 WFW 411
W
Sbjct: 292 GVW 294
Score = 212 (79.7 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 64/259 (24%), Positives = 116/259 (44%)
Query: 206 KGTLKLT-LTGHIEQVRGLAVSSKHT-YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY 263
K KL H V L + K + + + G+D +V W + + I S +GH SG+
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 264 CLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDS 323
+ + ++ G ++WD+ + L GH + SV P +GS D+
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 324 TIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLS 382
+K WD+R + T H + V + P S +NI K ++L G+ L S
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 383 QQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSY 442
+ I + E +LATG + ++ FWD ++ F+ ++ G ++ AG+ LS+
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLET---FE----LIGSGGPET-AGVRCLSF 235
Query: 443 DVTGSRLVTCEADKTIKMW 461
+ G + V C +++K++
Sbjct: 236 NPDG-KTVLCGLQESLKIF 253
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 50/167 (29%), Positives = 73/167 (43%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K R ++GH SV F +F +GS D +KIWD+ K T GH V L
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 151
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
+ ++ S G+D VK WDL K++ + H + L HP +L TG D +
Sbjct: 152 TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKF 211
Query: 286 WDIRTKMQIFALAGHDNTV--CSVFTRPTDPQVVTGSHDSTIKF-WD 329
WD+ T ++ G + C F P V+ G +S F W+
Sbjct: 212 WDLET-FELIGSGGPETAGVRCLSFN-PDGKTVLCGLQESLKIFSWE 256
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 266 (98.7 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 80/262 (30%), Positives = 121/262 (46%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY 231
SG L ++RSV F + TG+ D+ I++WD+A T+K +GH + + L + Y
Sbjct: 314 SGDL-YIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRY 372
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ S DK V+ WD+ + K++ + GV + + P + G D RVWD T
Sbjct: 373 IASGSGDKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTG 431
Query: 292 MQIFALA---GHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL-----RY------GKTML 337
+ L GH ++V SV P ++V+GS D TIK W+L +Y GK
Sbjct: 432 YLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHR 491
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG 397
T HK V ++ L P S S + +F P ML K + S+A + G
Sbjct: 492 TFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTG 551
Query: 398 VL-ATG-GD-NGSLWFWDWKSG 416
L ATG GD +W + +G
Sbjct: 552 NLFATGSGDMRARIWRYSAYTG 573
Score = 244 (91.0 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ-VRGLAVSSK 228
+ SGH + S+ F + + +GS D+T+++WD+A+G L TL+ IE V +A+S
Sbjct: 353 IFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLS--IEDGVTTVAMSPD 410
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYH---GHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
Y+ + DK V+ WD ++ GH VY + P L++G D ++
Sbjct: 411 GLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKL 470
Query: 286 WDIRTKMQIFALAG-----------HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGK 334
W++ Q + AG H + V SV P V++GS D ++FWD G
Sbjct: 471 WELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGN 530
Query: 335 TMLTLTHHKKSVRAMALHPTEDCFASASAE 364
+ L HK SV ++A PT + FA+ S +
Sbjct: 531 AQMMLQGHKNSVISVAPSPTGNLFATGSGD 560
Score = 228 (85.3 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 81/311 (26%), Positives = 134/311 (43%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGH-IEQ-----VRGLAVSS 227
H V V F + TG +R+ +I+DV G L +++ +R + S
Sbjct: 268 HDSVVCCVRFSRDGKYLATG-CNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
Y+ + +DKQ++ WD+ + + GH +Y L + +G D R+WD
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH---HKK 344
I ++ L+ D V +V P V GS D T++ WD G + L + HK
Sbjct: 387 IAEGKLVYTLSIEDG-VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKD 445
Query: 345 SVRAMALHPTEDCFASASAEN-IK--KFNLP--------KGEFLHNMLSQQKTIINSMAV 393
SV ++A P S S + IK + NLP KG H K + S+ +
Sbjct: 446 SVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCL 505
Query: 394 NEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVT 451
+G V++ D G + FWD +G+ AQ ++Q G +S + +++ TG+ T
Sbjct: 506 TPDGHWVMSGSKDRG-VQFWDPITGN----AQMMLQ-GHKNS---VISVAPSPTGNLFAT 556
Query: 452 CEADKTIKMWR 462
D ++WR
Sbjct: 557 GSGDMRARIWR 567
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 26/91 (28%), Positives = 41/91 (45%)
Query: 157 PRPEWHAPWK---CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL 213
PR ++++ K C+R GH +V SV W +GS DR ++ WD G ++ L
Sbjct: 476 PRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMML 535
Query: 214 TGHIEQVRGLAVSSKHTYMFSAGDDKQVKCW 244
GH V +A S + D + + W
Sbjct: 536 QGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 259 (96.2 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 72/298 (24%), Positives = 132/298 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R +GH G + + F T S D T+ +W++ + + H V G+A S K
Sbjct: 12 RHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPK 71
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SAG D+ VK W+ + V + H V + T ++LT D ++W +
Sbjct: 72 GNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRV 131
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ + + A +N V S P V T S D +++ +D+ G+ + T T + + R
Sbjct: 132 ARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQ 191
Query: 349 MALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNG 406
+A HP + A A N IK F++ G L + +N +A + G L +G D+
Sbjct: 192 LAWHPWGNMLAVALGCNRIKIFDV-SGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDR 250
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
++ D G + T+ G D+ + A+++ G + T +D+ + +W+ +
Sbjct: 251 TIRILDLLEG---RPIYTLT--GHTDA---VNAVAFSRDGDKFATGGSDRQLLVWQSN 300
Score = 118 (46.6 bits), Expect = 0.00048, P = 0.00048
Identities = 50/255 (19%), Positives = 106/255 (41%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGL 267
L+ TGH + L + ++ D V W+L Q + IR + H + V +
Sbjct: 10 LERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR-FASHSAPVNGVAW 68
Query: 268 HPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKF 327
P +++ + G D ++W+ + + H V SV T ++T S D + K
Sbjct: 69 SPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKI 128
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKT 386
W + + + + VR+ P A+AS + +++ +++ GE + ++++
Sbjct: 129 WRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTF-TEERA 187
Query: 387 IINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
+A + G +LA + +D SG Q + A + +++ +
Sbjct: 188 APRQLAWHPWGNMLAVALGCNRIKIFD-VSGSQLLQLYVV-------HSAPVNDVAFHPS 239
Query: 446 GSRLVTCEADKTIKM 460
G L++ D+TI++
Sbjct: 240 GHFLLSGSDDRTIRI 254
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 260 (96.6 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 91/346 (26%), Positives = 149/346 (43%)
Query: 140 ERNLSTSAIMERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRT 198
E N+ +R P +W PRP P K Y +SGH V V F + + S D T
Sbjct: 78 EINIGGPIGQKRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVIVSASEDAT 131
Query: 199 IKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGH 258
IK+WD G + TL GH + V+ ++ + S D +K WD + + IR+ HGH
Sbjct: 132 IKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 259 LSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVT 318
V + + P D +++ RD ++W++ T + GH V V + +
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 319 GSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP--TEDCFASASAENIKKFNLPKGEF 376
S+D T++ W + + L H+ V ++ P A+ KK P G F
Sbjct: 252 SSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKP-GPF 310
Query: 377 LHNMLSQQKTI----------INSMAVNEE---GVLA-TGG-------DNGSLWFWDWKS 415
L + S+ KTI + ++ ++ GVL GG D+ +L WD+K
Sbjct: 311 LLSG-SRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYK- 368
Query: 416 GHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
N + +T+ E + +L + T +VT D+T+K+W
Sbjct: 369 --NKRCTKTLSA-----HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 185 (70.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 36/98 (36%), Positives = 53/98 (54%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
+GS D+TIK+WDV+ G +TL GH VRG+ V Y+ S DDK ++ WD + +
Sbjct: 313 SGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRC 372
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
++ H V L H T ++TG D +VW+ R
Sbjct: 373 TKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + +HP +++ D R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K L+ H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 265 (98.3 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 57/197 (28%), Positives = 87/197 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+V+ GH G V S F ++ + S D +I+ WD+ T + GH V L +S
Sbjct: 332 KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPH 391
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y SA D+ + W ++ +R Y GHL+ V C+ HP + L TG D R+W
Sbjct: 392 SLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWST 451
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ + GH V S+ P + + D +K WDL G L H ++ +
Sbjct: 452 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 511
Query: 349 MALHPTEDCFASASAEN 365
+ P ASAS +N
Sbjct: 512 LTFSPDSSLVASASMDN 528
Score = 220 (82.5 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 44/141 (31%), Positives = 70/141 (49%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V V F ++ + TGS D+T+++W +G TGH V LA S
Sbjct: 416 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPN 475
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ SAG+D+++K WDL + + GH + L P ++ + D+ RVWDI
Sbjct: 476 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDI 535
Query: 289 RTKMQIFALAGHDNTVCSVFT 309
R+ G + + V+T
Sbjct: 536 RSSHCSTPADGSSSELVGVYT 556
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 207 GTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ--NKVIRSYHGHLSGVYC 264
GT L GH V + + + S +D ++ WDL N V+ Y GH V+
Sbjct: 328 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWD 385
Query: 265 LGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDST 324
L + P + D R+W + AGH V V P + TGS D T
Sbjct: 386 LDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 445
Query: 325 IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ 383
++ W + G ++ T H+ V ++A P ASA + +K ++L G L+ L
Sbjct: 446 VRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT-LYKELRG 504
Query: 384 QKTIINSMAVN-EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIY 438
I S+ + + ++A+ + S+ WD +S H A GS G+Y
Sbjct: 505 HTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPAD-----GSSSELVGVY 555
Score = 192 (72.6 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 42/160 (26%), Positives = 72/160 (45%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGHIEQVRGLAVSSKHTY 231
GH V + + +F + S DRT ++W + T L + GH+ V + Y
Sbjct: 378 GHAYPVWDLDISPHSLYFASASHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNY 436
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + DK V+ W +Q +R + GH V L P L + G D ++WD+ +
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 496
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L GH + + S+ P V + S D++++ WD+R
Sbjct: 497 TLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIR 536
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 50/224 (22%), Positives = 91/224 (40%)
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
KV+R GH VY LL+ D R WD+ + GH V +
Sbjct: 332 KVLR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 388
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKK 368
P + SHD T + W + H V + HP + A+ S + ++
Sbjct: 389 SPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
++ +G + + ++ S+A + G LA+ G++ L WD SG +++ +
Sbjct: 449 WSTQQGNSVRLFTGHRGPVL-SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR---- 503
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--REDETATP 469
G D+ I +L++ S + + D ++++W R +TP
Sbjct: 504 -GHTDN---ITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTP 543
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 266 (98.7 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 56/214 (26%), Positives = 103/214 (48%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVR 221
H P + R + GH G V V+F N + + S D+T+++W + T ++ GH + V
Sbjct: 504 HKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVW 563
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDS 281
+ S Y +A D+ + W + +R + GH++ V C+ HP + + TG D
Sbjct: 564 DVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDK 623
Query: 282 VCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
CR+WD+ T + GH N+V + P + +G D I WD+ G+ + ++
Sbjct: 624 TCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRG 683
Query: 342 HKK-SVRAMALHPTEDCFASASAEN-IKKFNLPK 373
H + S+ ++A S A+N ++ +++ K
Sbjct: 684 HARASLYSLAFSRDGTVLVSGCADNSVRVWDVKK 717
Score = 256 (95.2 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 74/256 (28%), Positives = 111/256 (43%)
Query: 181 VAFDHSNTWFCTGSADRTIKIWDV----AKGTLKLT----------LTGHIEQVRGLAVS 226
+ F+ +T G D IK+W + K LK L GH V G++ S
Sbjct: 467 IEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFS 526
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
+ Y+ S +DK V+ W L+ + SY GH V+ + P +T D R+W
Sbjct: 527 PDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLW 586
Query: 287 --DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
D ++IFA GH N V V P V TGS D T + WD+ G + H
Sbjct: 587 ATDHIYPLRIFA--GHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTN 644
Query: 345 SVRAMALHPTEDCFASASAENIK-KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATG 402
SV +A+ P AS + I +++ G L +M + + S+A + +G VL +G
Sbjct: 645 SVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSG 704
Query: 403 GDNGSLWFWDWKSGHN 418
+ S+ WD K N
Sbjct: 705 CADNSVRVWDVKKNTN 720
Score = 212 (79.7 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 59/228 (25%), Positives = 100/228 (43%)
Query: 253 RSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPT 312
R GH VY + P LL+ D R+W + T + + GH V V P
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL 570
Query: 313 DPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTED-CFASASAENIKKFNL 371
VT SHD T + W + + H V + HP + F +S + + +++
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDV 630
Query: 372 PKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
G + L ++ N +AV+ +G LA+GG++G + WD SG + + G
Sbjct: 631 HTGNCVRVFLGHTNSV-NCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMR-----GH 684
Query: 431 LDSEAGIYALSYDVTGSRLVTCEADKTIKMW---REDETATPETHPLN 475
+ A +Y+L++ G+ LV+ AD ++++W + A PE N
Sbjct: 685 --ARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTNDAGPEPEAFN 730
Score = 125 (49.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 26/84 (30%), Positives = 38/84 (45%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE-QVRGLAV 225
C RV GH V +A W +G D I +WD+ G ++ GH + LA
Sbjct: 635 CVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAF 694
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQN 249
S T + S D V+ WD+++N
Sbjct: 695 SRDGTVLVSGCADNSVRVWDVKKN 718
Score = 44 (20.5 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 60 GIKSTNEPRRQVNSTTIAHRNQPSGSSDVLALPGPEGSRDAQKAGAQNAL-VVGPSAQPK 118
G K ++ + Q ST + ++PS + +P + + QK+ QN G + +
Sbjct: 10 GNKDGDKHQTQ-ESTNTSGNSEPSAPTPA-QVPSVQQQQQQQKSSTQNQQSTTGSARSSQ 67
Query: 119 GLNN 122
G +N
Sbjct: 68 GRSN 71
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 264 (98.0 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 78/310 (25%), Positives = 136/310 (43%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYM 232
GH G V V + + DR I++W + + H +R ++ S+ Y+
Sbjct: 87 GHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYL 146
Query: 233 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR--- 289
S+ DDK +K W L+ K + S+ GH + V + P + ++ +G D +WD+
Sbjct: 147 LSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQK 206
Query: 290 -----------TKM-QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
K+ QI + + H +TV V P +++ S D IK D+R K +
Sbjct: 207 IVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQ 266
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V ++++HPT ASA +++ IK ++L +G ++ + S K I ++ N+
Sbjct: 267 HYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDI-TTVQFNQS 325
Query: 397 G-VLATGGDNGSLWFWDWKSGHNFQQAQTI----VQPGSLD-SEAGIYALSYDVTGSRLV 450
G ATGG W N Q + + V+ ++ S G+YA + T
Sbjct: 326 GDYFATGGSQNLCMVWKTNFDQNIQNIEQVQRSTVRQNDVEYSSGGLYAQTLFKTNKTAS 385
Query: 451 TCEADKTIKM 460
+ KTI +
Sbjct: 386 LSPSKKTISI 395
Score = 245 (91.3 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
KC +I H G +RS++F + + S D+T+K+W + + GH VR +
Sbjct: 123 KC-SIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVI 181
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKV---------------IRSYHGHLSGVYCLGLHPT 270
S + S DDK V WDL K+ I SY H+ V + HP
Sbjct: 182 SPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPD 241
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
L++ D ++ DIR+ I HD V S+ PT + + DS IK WDL
Sbjct: 242 GTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDL 301
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI 366
R G+ + TL + K + + + + D FA+ ++N+
Sbjct: 302 RQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNL 337
Score = 195 (73.7 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 49/189 (25%), Positives = 88/189 (46%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWD------VAK-GTL----KLT----LTGH 216
+GH WVRS +GS D+T+ +WD V+K TL K++ + H
Sbjct: 170 AGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDH 229
Query: 217 IEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
++ V + T + S+ D ++K D+ NK+I+ Y+ H + V + +HPT L +
Sbjct: 230 MDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLAS 289
Query: 277 GGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTM 336
G DS ++WD+R QI+ L +D + +V + TG + W + + +
Sbjct: 290 AGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWKTNFDQNI 349
Query: 337 LTLTHHKKS 345
+ ++S
Sbjct: 350 QNIEQVQRS 358
Score = 191 (72.3 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 67/311 (21%), Positives = 121/311 (38%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + FD + S D + +W+ GH V + S
Sbjct: 41 RSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPD 100
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ S G D+Q++ W H + + LL+ D ++W +
Sbjct: 101 GETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRL 160
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML---TL------ 339
+ K + + AGH N V S P V +GS D T+ WDL + K + TL
Sbjct: 161 QDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKI 220
Query: 340 ------THHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMA 392
+ H +V + HP C S+S ++ IK ++ + + + + + NS++
Sbjct: 221 SQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQV-NSIS 279
Query: 393 VNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVT 451
++ G LA+ G + + WD + G +Q T+ S D + I + ++ +G T
Sbjct: 280 IHPTGYFLASAGSDSKIKIWDLRQG---RQIYTLY---SNDKD--ITTVQFNQSGDYFAT 331
Query: 452 CEADKTIKMWR 462
+ +W+
Sbjct: 332 GGSQNLCMVWK 342
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 57/262 (21%), Positives = 106/262 (40%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
L + GH + + K + S D V W+ + + + GH VYC+
Sbjct: 39 LSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYS 98
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P + + + G+D R+W + + + H + S+ +++ S D T+K W
Sbjct: 99 PDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLW 158
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---IKKFNLPKGEFLHNMLSQQK 385
L+ K M + HK VR+ + P AS S + + N K ++ L
Sbjct: 159 RLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNV 218
Query: 386 TI--INSMAVNEEGVLAT-GGDNGSLWF---WDWKSGHNFQQAQTIVQPGSLDSEAGIYA 439
I INS + + + V +G+ +D K ++ ++Q + +A + +
Sbjct: 219 KISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAH-DAQVNS 277
Query: 440 LSYDVTGSRLVTCEADKTIKMW 461
+S TG L + +D IK+W
Sbjct: 278 ISIHPTGYFLASAGSDSKIKIW 299
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 263 (97.6 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 56/197 (28%), Positives = 87/197 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V S F ++ + S D +I+ WD+ T + GH V + +S
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPF 395
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S D+ + W ++ +R Y GHL+ V C+ HP + L TG D R+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ + GH V S+ P + + D +K WDL G L H S+ +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITS 515
Query: 349 MALHPTEDCFASASAEN 365
+A P ASAS +N
Sbjct: 516 LAFSPDSGLIASASMDN 532
Score = 218 (81.8 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 43/141 (30%), Positives = 69/141 (48%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V V F ++ + TGS D+T+++W +G TGH V L+ S
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPN 479
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ SAG+D+++K WDL + + GH + L P ++ + D+ RVWDI
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
Query: 289 RTKMQIFALAGHDNTVCSVFT 309
R+ G + V+T
Sbjct: 540 RSTCCNTPADGSSGELVGVYT 560
Score = 200 (75.5 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGHIEQVRGLAVSSKHTY 231
GH V V + +F +GS DRT ++W + T L + GH+ V + Y
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + DK V+ W +Q +R + GH V L P L + G D ++WD+ +
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L GH +++ S+ P + + S D++++ WD+R
Sbjct: 501 TLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 540
Score = 196 (74.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 207 GTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ--NKVIRSYHGHLSGVYC 264
GT L GH V + + + S +D ++ WDL N V+ Y GH V+
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWD 389
Query: 265 LGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDST 324
+ + P +G D R+W + AGH V V P + TGS D T
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 325 IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ 383
++ W + G ++ T H+ V +++ P ASA + +K ++L G +
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGH 509
Query: 384 QKTIINSMAVN-EEGVLATGGDNGSLWFWDWKS 415
+I S+A + + G++A+ + S+ WD +S
Sbjct: 510 TDSI-TSLAFSPDSGLIASASMDNSVRVWDIRS 541
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/214 (22%), Positives = 87/214 (40%)
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K++R GH VY LL+ D R WD+ + GH V V
Sbjct: 336 KILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDI 392
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKK 368
P +GSHD T + W + H V + HP + A+ S + ++
Sbjct: 393 SPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
++ +G + + ++ S++ + G LA+ G++ L WD SG F++ +
Sbjct: 453 WSAQQGNSVRLFTGHRGPVL-SLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR---- 507
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G DS I +L++ + + D ++++W
Sbjct: 508 -GHTDS---ITSLAFSPDSGLIASASMDNSVRVW 537
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 263 (97.6 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 70/221 (31%), Positives = 103/221 (46%)
Query: 161 WHAPWKCYRV-ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W + R+ +GH + S+ F +GS DRT+++WD+ GT T IE
Sbjct: 373 WDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFT--IED 430
Query: 220 -VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG---HLSGVYCLGLHPTIDILL 275
V +A+S Y+ + DK V+ WDL Q + G H VY + P L+
Sbjct: 431 GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLV 490
Query: 276 TGGRDSVCRVWDIRT---KMQ---------IFALAGHDNTVCSVFTRPTDPQVVTGSHDS 323
TG D ++W++ T MQ + GH + V SV P + V++GS D
Sbjct: 491 TGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDR 550
Query: 324 TIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
++FWD R G T L L HK SV ++A PT FA+ S +
Sbjct: 551 GVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGD 591
Score = 247 (92.0 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 69/258 (26%), Positives = 113/258 (43%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY 231
+G L ++RSV F + TG+ D+ I++WD+ T+++ GH + + L +
Sbjct: 344 TGDL-YIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRT 402
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ S D+ V+ WD+E + + GV + + P + G D RVWD+
Sbjct: 403 IASGSGDRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQG 461
Query: 292 MQIFALAG---HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL------------RYGKTM 336
+ L G H ++V SV P +VTGS D TIK W+L + G+ +
Sbjct: 462 CPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCV 521
Query: 337 LTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
T H+ V ++AL P S S + +F P+ ML K + S+A +
Sbjct: 522 KTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPT 581
Query: 397 G-VLATGGDNGSLWFWDW 413
G ATG + W +
Sbjct: 582 GGFFATGSGDMRARIWSY 599
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 53/226 (23%), Positives = 98/226 (43%)
Query: 258 HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGH--DNT----VCSVFTRP 311
H S V C+ + TG S +++D+ T ++ L D T + SV P
Sbjct: 298 HESVVCCVRFSADGKYVATGCNRSA-QIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFN 370
+ TG+ D I+ WD+ + H++ + ++ AS S + ++ ++
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWD 416
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPG 429
+ G L + + ++A++ + +A G + S+ WD G ++ + G
Sbjct: 417 IENGTALTVFTIEDG--VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEG--PDG 472
Query: 430 SLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATPETHPLN 475
DS +Y++++ G LVT DKTIK+W E ATP + N
Sbjct: 473 HKDS---VYSVAFSPNGRDLVTGSLDKTIKLW---ELATPRGNMQN 512
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GH +V SVA N W +GS DR ++ WD G+ +L L GH V +A
Sbjct: 519 RCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAP 578
Query: 226 SSKHTYMFSAGDDKQVKCW 244
S + + D + + W
Sbjct: 579 SPTGGFFATGSGDMRARIW 597
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 257 (95.5 bits), Expect = 8.8e-20, P = 8.8e-20
Identities = 89/336 (26%), Positives = 149/336 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTED--CFASASAENIKKFNLPKGEFLHNMLSQQKT 386
+ + L H+ V ++ P + A+ KK P G FL + S+ KT
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKP-GPFLLSG-SRDKT 319
Query: 387 I----------INSMAVNEE---GVLA-TGG-------DNGSLWFWDWKSGHNFQQAQTI 425
I + ++ ++ GVL +GG D+ +L WD+K N + +T+
Sbjct: 320 IKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFK---NKRCMKTL 376
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
E + +L + T +VT D+T+K+W
Sbjct: 377 NA-----HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 193 (73.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WD++ G +TL GH V
Sbjct: 284 W-APESSYSTISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 260 (96.6 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 55/197 (27%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V S F ++ + S D +I+ WD+ T + GH V L +S
Sbjct: 354 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY 413
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S D+ + W ++ +R Y GHL+ V C+ HP + L TG D R+W
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 473
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ + GH V S+ P + + D +K WDL G L H ++ +
Sbjct: 474 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 533
Query: 349 MALHPTEDCFASASAEN 365
+ P ASAS +N
Sbjct: 534 LTFSPDSSLIASASMDN 550
Score = 219 (82.2 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 44/141 (31%), Positives = 68/141 (48%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V V F ++ + TGS D+T+++W +G TGH V LA S
Sbjct: 438 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 497
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ SAG+D+++K WDL + + GH + L P ++ + D+ RVWDI
Sbjct: 498 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
Query: 289 RTKMQIFALAGHDNTVCSVFT 309
R G + V+T
Sbjct: 558 RNTYCSTPADGSSGELVGVYT 578
Score = 196 (74.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGHIEQVRGLAVSSKHTY 231
GH V + + +F +GS DRT ++W + T L + GH+ V + Y
Sbjct: 400 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNY 458
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + DK V+ W +Q +R + GH V L P L + G D ++WD+ +
Sbjct: 459 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 518
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L GH + + S+ P + + S D++++ WD+R
Sbjct: 519 TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 558
Score = 191 (72.3 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 55/210 (26%), Positives = 89/210 (42%)
Query: 207 GTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ--NKVIRSYHGHLSGVYC 264
GT L GH V + + + S +D ++ WDL N V+ Y GH V+
Sbjct: 350 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWD 407
Query: 265 LGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDST 324
L + P +G D R+W + AGH V V P + TGS D T
Sbjct: 408 LDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 467
Query: 325 IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ 383
++ W + G ++ T H+ V ++A P ASA + +K ++L G L+ L
Sbjct: 468 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT-LYKELRG 526
Query: 384 QKTIINSMAVN-EEGVLATGGDNGSLWFWD 412
I S+ + + ++A+ + S+ WD
Sbjct: 527 HTDNITSLTFSPDSSLIASASMDNSVRVWD 556
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/224 (22%), Positives = 92/224 (41%)
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K++R GH VY LL+ D R WD+ + GH V +
Sbjct: 354 KILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 410
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKK 368
P +GSHD T + W + H V + HP + A+ S + ++
Sbjct: 411 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 470
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
++ +G + + ++ S+A + G LA+ G++ L WD SG +++ +
Sbjct: 471 WSAQQGNSVRLFTGHRGPVL-SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR---- 525
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--REDETATP 469
G D+ I +L++ S + + D ++++W R +TP
Sbjct: 526 -GHTDN---ITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTP 565
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 258 (95.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 72/278 (25%), Positives = 130/278 (46%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
+GS DRT+ +WDV + L GH V L + + S D + WD + +
Sbjct: 236 SGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRP 295
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW--DIRTKMQ--IFALAGHDNTVCSV 307
++ Y GH V LG+ + + +++ RD RVW D + + + L GH +V SV
Sbjct: 296 LKVYFGHTDNV--LGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV 353
Query: 308 FTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIK 367
+VT S D T++ WD+ G + + H++ + A A + + + +S I+
Sbjct: 354 QYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGI-ACAQYNGKFIVSGSSDLTIR 412
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
F G+ L ML + +I ++ N+E +++ GG +G++ W++ +G Q V
Sbjct: 413 IFEASSGKLLR-MLQGHEDLIRTVRFNDEKIVS-GGYDGTVRIWNFNTGE-----QHCVL 465
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDE 465
S +S ++ L +D R++ C I +W D+
Sbjct: 466 HNSRNSR--VFGLQFD--HRRIIACTHSSEILVWNFDD 499
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 69/279 (24%), Positives = 113/279 (40%)
Query: 143 LSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIW 202
+ S +R S W +K Y GH G V + F +GS+D TI IW
Sbjct: 233 IMVSGSKDRTVSVWDVNSRFILYKLY----GHSGSVLCLDFCRRRNLLVSGSSDSTIIIW 288
Query: 203 DVA-KGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRS-YH---G 257
D + LK+ GH + V G+ VS Y+ S+ D + W L+ + H G
Sbjct: 289 DWQNRRPLKVYF-GHTDNVLGVVVSEN--YIISSSRDHTARVWRLDATSPAEACMHVLRG 345
Query: 258 HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQV 316
HL+ V + +++T D R WDI T I + H + C+ + +
Sbjct: 346 HLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKF---I 402
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGE- 375
V+GS D TI+ ++ GK + L H+ +R + + E + ++ +N GE
Sbjct: 403 VSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFND-EKIVSGGYDGTVRIWNFNTGEQ 461
Query: 376 --FLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWD 412
LHN S+ + + + T +W +D
Sbjct: 462 HCVLHN--SRNSRVFGLQFDHRRIIACTHSSEILVWNFD 498
Score = 167 (63.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 44/169 (26%), Positives = 78/169 (46%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C V+ GHL V SV + T S+DRT++ WD+ G + H Q RG+A +
Sbjct: 339 CMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRII--HAHQ-RGIACA 395
Query: 227 SKH-TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
+ ++ S D ++ ++ K++R GH + + + + +++GG D R+
Sbjct: 396 QYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFND--EKIVSGGYDGTVRI 453
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYG 333
W+ T Q L H++ VF D + ++ +H S I W+ G
Sbjct: 454 WNFNTGEQHCVL--HNSRNSRVFGLQFDHRRIIACTHSSEILVWNFDDG 500
Score = 157 (60.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 53/216 (24%), Positives = 104/216 (48%)
Query: 253 RSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRP 311
+ + L VYC+ +I+++G +D VWD+ ++ ++ L GH +V C F R
Sbjct: 215 QDFRATLDSVYCVQYDD--EIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRR 272
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FN 370
+ +V+GS DSTI WD + + + H +V + + +E+ S+S ++ + +
Sbjct: 273 RN-LLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVV--SENYIISSSRDHTARVWR 329
Query: 371 L----PKGEFLHNMLSQQKTIINSMAVNEE-GVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
L P +H +L +NS+ + + G++ T + +L WD +GH + I
Sbjct: 330 LDATSPAEACMH-VLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIR----I 384
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ + GI Y+ G +V+ +D TI+++
Sbjct: 385 IHA----HQRGIACAQYN--GKFIVSGSSDLTIRIF 414
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 41/197 (20%), Positives = 84/197 (42%)
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
M S D+ V WD+ ++ +GH V CL ++L++G DS +WD + +
Sbjct: 234 MVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNR 293
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKT----MLTLTHHKKSVR 347
+ GH + V V ++ +++ S D T + W L M L H SV
Sbjct: 294 RPLKVYFGHTDNVLGVVV--SENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVN 351
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNG 406
++ +AS++ ++ +++ G + + + Q+ I + A + +G +
Sbjct: 352 SVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGI--ACAQYNGKFIVSGSSDL 409
Query: 407 SLWFWDWKSGHNFQQAQ 423
++ ++ SG + Q
Sbjct: 410 TIRIFEASSGKLLRMLQ 426
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 254 (94.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 91/330 (27%), Positives = 148/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 259 (96.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 55/197 (27%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+V+ GH G V S F ++ + S D +I+ WD+ T + GH V + +S
Sbjct: 336 KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPY 395
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S D+ + W ++ +R Y GHL+ V C+ HP + L TG D R+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ + GH V S+ P + + D +K WDL G L H ++ +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITS 515
Query: 349 MALHPTEDCFASASAEN 365
+ P ASAS +N
Sbjct: 516 LTFSPDSSLIASASMDN 532
Score = 220 (82.5 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V V F ++ + TGS D+T+++W +G TGH V LA S
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 479
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ SAG+D+++K WDL + + GH + L P ++ + D+ RVWDI
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Query: 289 RTKMQIFALAGHDNTVCSVFT 309
R G + + V+T
Sbjct: 540 RNTHCSAPTDGSSSELVGVYT 560
Score = 200 (75.5 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 43/160 (26%), Positives = 73/160 (45%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGHIEQVRGLAVSSKHTY 231
GH V V + +F +GS DRT ++W + T L + GH+ V + Y
Sbjct: 382 GHAYPVWDVDISPYSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + DK V+ W +Q +R + GH V L P L + G D ++WD+ +
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L GH + + S+ P + + S D++++ WD+R
Sbjct: 501 TLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 196 (74.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 207 GTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ--NKVIRSYHGHLSGVYC 264
GT L GH V + + + S +D ++ WDL N V+ Y GH V+
Sbjct: 332 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWD 389
Query: 265 LGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDST 324
+ + P +G D R+W + AGH V V P + TGS D T
Sbjct: 390 VDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 325 IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ 383
++ W + G ++ T H+ V ++A P ASA + +K ++L G +
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGH 509
Query: 384 QKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIY 438
I + + ++A+ + S+ WD ++ H A T GS G+Y
Sbjct: 510 TDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHC--SAPT---DGSSSELVGVY 559
Score = 157 (60.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 50/214 (23%), Positives = 88/214 (41%)
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
KV+R GH VY LL+ D R WD+ + GH V V
Sbjct: 336 KVLR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDI 392
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKK 368
P +GSHD T + W + H V + HP + A+ S + ++
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
++ +G + + ++ S+A + G LA+ G++ L WD SG F++ +
Sbjct: 453 WSAQQGNSVRLFTGHRGPVL-SLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELR---- 507
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ I +L++ S + + D ++++W
Sbjct: 508 -GHTDN---ITSLTFSPDSSLIASASMDNSVRVW 537
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 259 (96.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 55/197 (27%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V S F ++ + S D +I+ WD+ T + GH V L +S
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY 395
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S D+ + W ++ +R Y GHL+ V C+ HP + L TG D R+W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ + GH V S+ P + + D +K WDL G L H ++ +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 349 MALHPTEDCFASASAEN 365
+ P ASAS +N
Sbjct: 516 LTFSPDSGLIASASMDN 532
Score = 219 (82.2 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V V F ++ + TGS D+T+++W +G TGH V LA S
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 479
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ SAG+D+++K WDL + + GH + L P ++ + D+ RVWDI
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
Query: 289 RTKMQIFALAGHDNTVCSVFT 309
R G + + V+T
Sbjct: 540 RNTYCSAPADGSSSELVGVYT 560
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/236 (25%), Positives = 99/236 (41%)
Query: 207 GTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ--NKVIRSYHGHLSGVYC 264
GT L GH V + + + S +D ++ WDL N V+ Y GH V+
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWD 389
Query: 265 LGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDST 324
L + P +G D R+W + AGH V V P + TGS D T
Sbjct: 390 LDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 325 IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQ 383
++ W + G ++ T H+ V ++A P ASA + +K ++L G L+ L
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT-LYKELRG 508
Query: 384 QKTIINSMAVN-EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIY 438
I S+ + + G++A+ + S+ WD ++ + A GS G+Y
Sbjct: 509 HTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPAD-----GSSSELVGVY 559
Score = 195 (73.7 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGHIEQVRGLAVSSKHTY 231
GH V + + +F +GS DRT ++W + T L + GH+ V + Y
Sbjct: 382 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + DK V+ W +Q +R + GH V L P L + G D ++WD+ +
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L GH + + S+ P + + S D++++ WD+R
Sbjct: 501 TLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR 540
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 237 (88.5 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 66/252 (26%), Positives = 107/252 (42%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R H G V AF T S D + +W G L L GH V+ S
Sbjct: 20 RFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPD 79
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ S+ D ++ WD+ ++K + GH V + P L +GG D VW++
Sbjct: 80 GRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEV 139
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT---LTHHKKS 345
++ ++ L GH +++ S PT + TGS DST+ WDLR +++ L H +
Sbjct: 140 QSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN 199
Query: 346 VRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVN-EEGVLATGGD 404
+ + + AS S + P L L +NS+A + +E LA+ G
Sbjct: 200 ISCLC-YSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGY 258
Query: 405 NGSLWFWDWKSG 416
+ ++ WD +G
Sbjct: 259 SRTVKVWDCLTG 270
Score = 202 (76.2 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 53/201 (26%), Positives = 81/201 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
KC V+ GH V +V+F + +G D+ +W+V G L GH + ++
Sbjct: 101 KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDF 160
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYH---GHLSGVYCLGLHPTIDILLTGGRDSV 282
S + + D V WDL + + SYH GH + CL + +L +G D
Sbjct: 161 SPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCL-CYSASGLLASGSWDKT 219
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
VW T L GH V S+ P + ++ + + T+K WD GK + TL
Sbjct: 220 ICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGM 279
Query: 343 KKSVRAMALHPTEDCFASASA 363
A P S +A
Sbjct: 280 LDVAHACIFTPDGKLLVSGAA 300
Score = 178 (67.7 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 56/220 (25%), Positives = 92/220 (41%)
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+R Y H V C P LLT D VW ++ ++ LAGH V S P
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIK-KFN 370
+ + S D +I+ WD+ K + L H++SV ++ P AS + +
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
+ G +H ++ +I +S LATG + ++ WD ++ + +V +
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA------STPVVSYHN 192
Query: 431 LDSEAG-IYALSYDVTGSRLVTCEADKTIKMWREDETATP 469
L+ G I L Y +G L + DKTI +W+ P
Sbjct: 193 LEGHTGNISCLCYSASGL-LASGSWDKTICVWKPTTNNLP 231
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 253 (94.1 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 91/330 (27%), Positives = 147/330 (44%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W+++T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFAS---ASAENIKKFNLPKGEFLHNMLSQQK 385
+ + L H+ V ++ P E ++S A+ KK P G FL + S+ K
Sbjct: 262 VVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSETKKSGKP-GPFLLSG-SRDK 318
Query: 386 TIINSMAVNEEGVLAT--GGDN---GSLWFWDWKSGHNFQQAQTI-VQP-------GSLD 432
TI V+ L T G DN G L+ K + +T+ V +L+
Sbjct: 319 TI-KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377
Query: 433 S-EAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ E + +L + T +VT D+T+K+W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W AP Y IS G + + +GS D+TIK+WDV+ G +TL GH V
Sbjct: 284 W-APESSYSSISEATG-SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
RG+ S ++ S DDK ++ WD + + +++ + H V L H T ++TG D
Sbjct: 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Query: 281 SVCRVWDIR 289
+VW+ R
Sbjct: 402 QTVKVWECR 410
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + H +L+ D RVWD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H++ V S+ T P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 259 (96.2 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 65/233 (27%), Positives = 101/233 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R + GH G V AF + S D TI++W + + +T GH+ V + +
Sbjct: 444 RSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPH 503
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S DK + W + N+ +R + GHLS V C+ HP + + TG D R+WD
Sbjct: 504 GYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDN 563
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
T + + GH +V S+ + +GS D I WDL G + TL H +V
Sbjct: 564 MTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTT 623
Query: 349 MALHPTEDCFASASAENIKKFNLPKGEF---LHNMLSQQKTIINSMAVNEEGV 398
+ A+A +N NL +F + +S T+ + N+E V
Sbjct: 624 ITFSRDGTVLAAAGLDN----NLTLWDFHKVTEDYISNHITVSHHQDENDEDV 672
Score = 230 (86.0 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 59/222 (26%), Positives = 102/222 (45%)
Query: 194 SADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIR 253
SAD +++ D G + +L GH V A + + + S +D ++ W L +
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVV 486
Query: 254 SYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTD 313
+Y GH+ V+ + P ++ D R+W + + GH + V V P
Sbjct: 487 TYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNS 546
Query: 314 PQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLP 372
V TGS D T++ WD G+++ +T HK SV ++A AS S + NI ++L
Sbjct: 547 NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLS 606
Query: 373 KGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDW 413
G + +L T+ ++ + +G VLA G + +L WD+
Sbjct: 607 NGSLVTTLLRHTSTV-TTITFSRDGTVLAAAGLDNNLTLWDF 647
Score = 194 (73.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 61/251 (24%), Positives = 108/251 (43%)
Query: 168 YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSS 227
Y V++ H G V +T G D +++IW + L+ TL + +R L S
Sbjct: 371 YTVLNSHQG-VTCAEISDDSTMLACGFGDSSVRIWSLTPAKLR-TLKD-ADSLRELDKES 427
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
D V+ D +V RS GH VY P +++LL+ DS R+W
Sbjct: 428 A---------DINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWS 478
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ T + GH V V P V+ S+D T + W + + H V
Sbjct: 479 LLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVD 538
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDN 405
+ HP + A+ S++ ++ ++ G+ + +++ K ++S+A + G LA+G +
Sbjct: 539 CVQFHPNSNYVATGSSDRTVRLWDNMTGQSVR-LMTGHKGSVSSLAFSACGRYLASGSVD 597
Query: 406 GSLWFWDWKSG 416
++ WD +G
Sbjct: 598 HNIIIWDLSNG 608
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 257 (95.5 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 55/197 (27%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V S F ++ + S D +I+ WD+ T + GH V L +S
Sbjct: 336 KILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPC 395
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y SA D+ + W ++ +R Y GHL V C+ HP + L TG D R+W
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWST 455
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ + GH V ++ P + + D +K WDL G L H ++ +
Sbjct: 456 QQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 349 MALHPTEDCFASASAEN 365
+ P ASAS +N
Sbjct: 516 LTFSPDSSLIASASMDN 532
Score = 215 (80.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V V F ++ + TGS D+T+++W +G TGH V LA S
Sbjct: 420 RIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPN 479
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ SAG+D+++K WDL + + GH + L P ++ + D+ RVWDI
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Query: 289 RTKMQIFALAGHDNTVCSVFT 309
R G + + V+T
Sbjct: 540 RNTYCNAPADGSSSELVGVYT 560
Score = 196 (74.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 57/214 (26%), Positives = 90/214 (42%)
Query: 203 DVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ--NKVIRSYHGHLS 260
D + GT L GH V S + + S +D ++ WDL N V+ Y GH
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVL--YQGHAY 385
Query: 261 GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGS 320
V+ L + P + D R+W + AGH V V P + TGS
Sbjct: 386 PVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGS 445
Query: 321 HDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHN 379
D T++ W + G ++ T H+ V A+A P ASA + +K ++L G L+
Sbjct: 446 TDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGT-LYK 504
Query: 380 MLSQQKTIINSMAVN-EEGVLATGGDNGSLWFWD 412
L I S+ + + ++A+ + S+ WD
Sbjct: 505 ELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 41/160 (25%), Positives = 72/160 (45%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGHIEQVRGLAVSSKHTY 231
GH V + + +F + S DRT ++W + T L + GH+ V + Y
Sbjct: 382 GHAYPVWDLDISPCSLYFASASHDRTARLWSFDR-TYPLRIYAGHLLDVDCVKFHPNSNY 440
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + DK V+ W +Q +R + GH V L P L + G D ++WD+ +
Sbjct: 441 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L GH + + S+ P + + S D++++ WD+R
Sbjct: 501 TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 46/214 (21%), Positives = 88/214 (41%)
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K++R GH VY LL+ D R WD+R+ GH V +
Sbjct: 336 KILR---GHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDI 392
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKK 368
P + SHD T + W + H V + HP + A+ S + ++
Sbjct: 393 SPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
++ +G + + ++ ++A + G LA+ G++ L WD SG +++ +
Sbjct: 453 WSTQQGNSVRLFTGHRGPVL-ALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR---- 507
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ I +L++ S + + D ++++W
Sbjct: 508 -GHTDN---ITSLTFSPDSSLIASASMDNSVRVW 537
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 259 (96.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 71/251 (28%), Positives = 123/251 (49%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + + GH G V S+ ++ + + +GS+D +IK+WD+ K TL GH + V + +
Sbjct: 493 ECVQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLL 550
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
+ K Y+FS DK +K WDL+ + + H V L + L +G D +V
Sbjct: 551 NDK--YLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISG--QYLFSGSNDKTIKV 606
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD++T + L GH V ++ T+ + +GS+D TI+ W+L+ + TL H +
Sbjct: 607 WDLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKTIRVWNLKSLECSATLRGHDRW 664
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATG 402
V M + + +AS +N IK ++L + L + +AV E+ V++
Sbjct: 665 VEHMVI--CDKLLFTASDDNTIKIWDLETLR-CNTTLEGHNATVQCLAVWEDKKCVISCS 721
Query: 403 GDNGSLWFWDW 413
D S+ W W
Sbjct: 722 HDQ-SIRVWGW 731
Score = 226 (84.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 65/272 (23%), Positives = 130/272 (47%)
Query: 192 TGSADRTIKIWDVAKGTLKL--TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN 249
TG +D +I+++D ++ TL GH V + + + Y+FS D +K WDL++
Sbjct: 475 TGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQ--YLFSGSSDHSIKVWDLKKL 532
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
+ I + GH V+ + L+ L +G D +VWD++T + L H V ++
Sbjct: 533 RCIFTLEGHDKPVHTVLLNDKY--LFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI 590
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKF 369
+ + +GS+D TIK WDL+ + TL H K V + + T + ++ + + I+ +
Sbjct: 591 --SGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGT-NLYSGSYDKTIRVW 647
Query: 370 NLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPG 429
NL E + + + M + ++ +L T D+ ++ WD ++ + T ++
Sbjct: 648 NLKSLECSATLRGHDRWV-EHMVICDK-LLFTASDDNTIKIWDLET----LRCNTTLE-- 699
Query: 430 SLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
A + L+ +++C D++I++W
Sbjct: 700 --GHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 174 (66.3 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 165 WKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLA 224
++C + GH WV ++ +N + +GS D+TI++W++ TL GH V +
Sbjct: 612 FRCNYTLKGHTKWVTTICILGTNLY--SGSYDKTIRVWNLKSLECSATLRGHDRWVEHMV 669
Query: 225 VSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
+ K +F+A DD +K WDLE + + GH + V CL + +++ D R
Sbjct: 670 ICDK--LLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIR 727
Query: 285 VW 286
VW
Sbjct: 728 VW 729
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/228 (25%), Positives = 117/228 (51%)
Query: 237 DDKQVKCWDLEQNKVIRSYHG-HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK-MQ- 293
++K+ + +LE K+I + G H++ C+ ++L TG D+ RV+D +++ M+
Sbjct: 439 NNKKKESINLETIKLIETIKGYHVTSHLCI----CDNLLFTGCSDNSIRVYDYKSQNMEC 494
Query: 294 IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
+ L GH+ V S+ D + +GS D +IK WDL+ + + TL H K V + L+
Sbjct: 495 VQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLND 552
Query: 354 TEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDW 413
+ F+ +S + IK ++L E + + S + + ++ ++ + L +G ++ ++ WD
Sbjct: 553 -KYLFSGSSDKTIKVWDLKTLECKYTLESHARAV-KTLCISGQ-YLFSGSNDKTIKVWDL 609
Query: 414 KSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
K+ F+ T+ G + + + G+ L + DKTI++W
Sbjct: 610 KT---FRCNYTL--KGHTK-----WVTTICILGTNLYSGSYDKTIRVW 647
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 252 (93.8 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 64/193 (33%), Positives = 93/193 (48%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H G VRSV F T S D++IK+W V + + TL H VR S M
Sbjct: 101 HTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMV 160
Query: 234 SAGDDKQVKCWDLEQNKVIRSY--HGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
S DD+ VK WD ++I ++ G S Y + HP+ + T D+ RVWDIRT
Sbjct: 161 SVSDDRTVKLWDASSRQLIHTFCEPGGYSS-Y-VDFHPSSTCIATASSDNTVRVWDIRTH 218
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMAL 351
+ H V ++ P+ ++T S DST+K DL G+ + TL H+ S ++
Sbjct: 219 TLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSF 278
Query: 352 HPTEDCFASASAE 364
+ D FASA ++
Sbjct: 279 SRSGDQFASAGSD 291
Score = 210 (79.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 62/256 (24%), Positives = 111/256 (43%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLG 266
TL+ GH + + L S + S D V W+++ Q++ R + GH V C+
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYR-FTGHKDAVTCVQ 67
Query: 267 LHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
P+ +L + RD R+W K + H +V SV ++T S D +IK
Sbjct: 68 FSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIK 127
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
W + K + TL H VR P S S + +K ++ + +H +
Sbjct: 128 LWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFC-EPG 186
Query: 386 TIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
+ + + +AT + ++ WD ++ H T++Q + S A + ALS+
Sbjct: 187 GYSSYVDFHPSSTCIATASSDNTVRVWDIRT-H------TLLQHYQVHS-AAVNALSFHP 238
Query: 445 TGSRLVTCEADKTIKM 460
+G+ L+T +D T+K+
Sbjct: 239 SGNHLLTASSDSTLKI 254
Score = 181 (68.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 52/193 (26%), Positives = 81/193 (41%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLT--GHIEQVRGLAVSSKHTY 231
H WVR F + S DRT+K+WD + L T G SS T
Sbjct: 143 HNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS--TC 200
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ +A D V+ WD+ + +++ Y H + V L HP+ + LLT DS ++ D+
Sbjct: 201 IATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEG 260
Query: 292 MQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA 350
++ L GH + C F+R D GS D + W +T + + ++
Sbjct: 261 RLLYTLHGHQGSASCVSFSRSGDQFASAGS-DQQVMVW-----RTNFDSVDYSRVLQQKR 314
Query: 351 LHPTEDCFASASA 363
H T AS +A
Sbjct: 315 DHRTPSAQASGAA 327
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/219 (21%), Positives = 98/219 (44%)
Query: 246 LEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVC 305
L+ + R++ GH + L P+ + +G D+ VW+++ + + + GH + V
Sbjct: 5 LDDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVT 64
Query: 306 SVFTRPTDPQVVTGSHDSTIKFWDLRY-GKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
V P+ + + S D T++ W G+++L H SVR++ +AS +
Sbjct: 65 CVQFSPSAHLLASSSRDKTVRLWVPSVKGESVL-FRAHTGSVRSVCFSADGQSLLTASDD 123
Query: 365 -NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATG-GDNGSLWFWDWKSGHNFQQA 422
+IK +++ + + + L + + + +G L D+ ++ WD S Q
Sbjct: 124 QSIKLWSVHRQKIICT-LREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSR---QLI 179
Query: 423 QTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
T +PG S Y + + + + + T +D T+++W
Sbjct: 180 HTFCEPGGYSS----Y-VDFHPSSTCIATASSDNTVRVW 213
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 235 (87.8 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 68/302 (22%), Positives = 129/302 (42%)
Query: 171 ISGHLGWVRSVAFDHSNT-WFCTGSADRTIKIW------DVAKGTLKLTLTGHIEQVRGL 223
+ GH GWV S+A ++ +GS D+T+ W D G K + GH V+ +
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+S+ Y SA D+ ++ WDLE + + + GH V + + + +++ RD
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTV 132
Query: 284 RVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLRYGKTMLTLTH 341
+VW+ + L GH++ V +V P+D V++ S D T+K WDL
Sbjct: 133 KVWNTIGECMA-TLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIG 191
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H + + L P ASA + I ++L K + L+ + + K ++++A +
Sbjct: 192 HTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTL--EAKAEVHALAFSPNRYWL 249
Query: 401 TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKM 460
+ + + + + G+ + +L++ G L D I++
Sbjct: 250 AAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRV 309
Query: 461 WR 462
W+
Sbjct: 310 WQ 311
Score = 176 (67.0 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 65/245 (26%), Positives = 112/245 (45%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGD-DKQVKCWDL---EQNKV-I--RSYHGHLSG 261
L+ TL GH V LA + H + +G DK + W L E N+ I +S+ GH
Sbjct: 9 LRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHI 68
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
V + + L+ D R+WD+ T GH V SV Q+V+ S
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASA---ENIKKFNLPKGEFLH 378
D T+K W+ G+ M TLT H V A+ + P++ SA + +K ++L
Sbjct: 129 DKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 379 NMLSQQKTIINSMAVNEEGVL-ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGI 437
+ + I+ + ++ +G L A+ G +G + WD + +T+ +L+++A +
Sbjct: 188 DFIGHTG-YISCITLSPDGSLCASAGKDGVIILWD------LNKNKTLY---TLEAKAEV 237
Query: 438 YALSY 442
+AL++
Sbjct: 238 HALAF 242
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAF---DHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHI 217
W+ +C ++GH WV +V D S+T + S D+T+K WD+A ++ GH
Sbjct: 135 WNTIGECMATLTGHNDWVSAVRISPSDQSST-VISASWDKTVKSWDLADYSVNADFIGHT 193
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHP 269
+ + +S + SAG D + WDL +NK + + V+ L P
Sbjct: 194 GYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHALAFSP 244
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 235 (87.8 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 68/302 (22%), Positives = 129/302 (42%)
Query: 171 ISGHLGWVRSVAFDHSNT-WFCTGSADRTIKIW------DVAKGTLKLTLTGHIEQVRGL 223
+ GH GWV S+A ++ +GS D+T+ W D G K + GH V+ +
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+S+ Y SA D+ ++ WDLE + + + GH V + + + +++ RD
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTV 132
Query: 284 RVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLRYGKTMLTLTH 341
+VW+ + L GH++ V +V P+D V++ S D T+K WDL
Sbjct: 133 KVWNTIGECMA-TLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIG 191
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H + + L P ASA + I ++L K + L+ + + K ++++A +
Sbjct: 192 HTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTL--EAKAEVHALAFSPNRYWL 249
Query: 401 TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKM 460
+ + + + + G+ + +L++ G L D I++
Sbjct: 250 AAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRV 309
Query: 461 WR 462
W+
Sbjct: 310 WQ 311
Score = 176 (67.0 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 65/245 (26%), Positives = 112/245 (45%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGD-DKQVKCWDL---EQNKV-I--RSYHGHLSG 261
L+ TL GH V LA + H + +G DK + W L E N+ I +S+ GH
Sbjct: 9 LRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHI 68
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
V + + L+ D R+WD+ T GH V SV Q+V+ S
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASA---ENIKKFNLPKGEFLH 378
D T+K W+ G+ M TLT H V A+ + P++ SA + +K ++L
Sbjct: 129 DKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 379 NMLSQQKTIINSMAVNEEGVL-ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGI 437
+ + I+ + ++ +G L A+ G +G + WD + +T+ +L+++A +
Sbjct: 188 DFIGHTG-YISCITLSPDGSLCASAGKDGVIILWD------LNKNKTLY---TLEAKAEV 237
Query: 438 YALSY 442
+AL++
Sbjct: 238 HALAF 242
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAF---DHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHI 217
W+ +C ++GH WV +V D S+T + S D+T+K WD+A ++ GH
Sbjct: 135 WNTIGECMATLTGHNDWVSAVRISPSDQSST-VISASWDKTVKSWDLADYSVNADFIGHT 193
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHP 269
+ + +S + SAG D + WDL +NK + + V+ L P
Sbjct: 194 GYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHALAFSP 244
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 233 (87.1 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 66/302 (21%), Positives = 128/302 (42%)
Query: 171 ISGHLGWVRSVAFDHSN-TWFCTGSADRTIKIWDVAK-----GTLKLTLTGHIEQVRGLA 224
+ GH GWV S+A N +GS D+T+ IW++ + G K +L GH V
Sbjct: 11 LEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCV 70
Query: 225 VSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
+SS Y SA DK ++ W+L + R++ GH + V + +++G RD +
Sbjct: 71 ISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIK 130
Query: 285 VWDIRTKMQIFAL-AGHDNTV-CSVFT-RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
+W+ + GH V C F+ P +P +V+ D +K W+L +
Sbjct: 131 LWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIG 190
Query: 342 HKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H + + + P AS + + ++L + + L+++ + + I+++ +
Sbjct: 191 HTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDE--IHALVFSPNRYWL 248
Query: 401 TGGDNGSLWFWDWKSGHNFQQAQT-IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIK 459
+ S+ +D + + + ++ G E +L++ G L D I+
Sbjct: 249 CAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNKIR 308
Query: 460 MW 461
W
Sbjct: 309 AW 310
Score = 199 (75.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 48/209 (22%), Positives = 93/209 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R + GH V + + S D+++++W+++ G T GH V ++ S+
Sbjct: 57 RSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSAD 116
Query: 229 HTYMFSAGDDKQVKCWD-LEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
+ + S D+ +K W+ L K + GH V C+ P ++++ G D + +V
Sbjct: 117 NRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKV 176
Query: 286 WDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
W++ + ++Q + GH + +V P +G D WDL K + +L H
Sbjct: 177 WELASCRLQTDHI-GHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSL-HAGD 234
Query: 345 SVRAMALHPTEDCFASASAENIKKFNLPK 373
+ A+ P +A++ +I F+L K
Sbjct: 235 EIHALVFSPNRYWLCAATSSSITIFDLEK 263
Score = 164 (62.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 59/216 (27%), Positives = 94/216 (43%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGD-DKQVKCWDLEQNKVI-----RSYHGHLSGV 262
L+ TL GH V LA S ++ M +G DK + W+L +++ RS GH V
Sbjct: 7 LRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIV 66
Query: 263 YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHD 322
+ L+ D R+W++ + GH N V SV + Q+V+GS D
Sbjct: 67 SDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRD 126
Query: 323 STIKFWDLRYGKTMLTLTH--HKKSVRAMAL--HPTEDCFASASAEN-IKKFNLPKGEFL 377
TIK W+ G T+T H + V + +P SA + +K + L
Sbjct: 127 RTIKLWNT-LGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQ 185
Query: 378 HNMLSQQKTIINSMAVNEEGVL-ATGGDNGSLWFWD 412
+ + IN++ ++ +G L A+GG +G WD
Sbjct: 186 TDHIGHTG-YINTVTISPDGSLCASGGKDGVTMLWD 220
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 233 (87.1 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 63/263 (23%), Positives = 114/263 (43%)
Query: 176 GWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSA 235
G VR+V ++ T+ + +D+ IK+W+ A G L T GH ++V A S +Y+ SA
Sbjct: 18 GAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSA 77
Query: 236 GDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIF 295
DK + WD+ +R H GV C+ + I ++GGRD+ WDIRT+
Sbjct: 78 SLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDP 137
Query: 296 ALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTE 355
+ C + ++ S D ++ +D+R G+ LT + + +A E
Sbjct: 138 VQVMKEARDCITTVATNENRIYAASLDGCVRTYDIRVGE--LTCDKIGEPITYLAQTRDE 195
Query: 356 DCFASASAENIKKF-NLPKGEFLHNMLSQQKTI--INSMAVNEEGVLATGGDNGSLWFWD 412
C + +++ + + G L + I ++ + + TG +G + +D
Sbjct: 196 QCLVAGCQDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYD 255
Query: 413 WKSGHNFQQAQTIVQPGSLDSEA 435
G Q+ + G + S A
Sbjct: 256 LLDGKVLQRIRISDNGGVVHSLA 278
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/212 (19%), Positives = 88/212 (41%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K T+ VR + + TY S G DK++K W+ ++++Y GH V
Sbjct: 9 VKTTIDCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGS 68
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
+++ D WD+ T + L H V C F + ++G D+ +
Sbjct: 69 CDSSYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSI-AISGGRDNAVMC 127
Query: 328 WDLRYGKT--MLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
WD+R + + + + + +A + E+ +AS + ++ +++ GE + + +
Sbjct: 128 WDIRTRRLDPVQVMKEARDCITTVATN--ENRIYAASLDGCVRTYDIRVGELTCDKIGEP 185
Query: 385 KTIINSMAVNEEGVLATGGDNGSLWFWDWKSG 416
T + +E L G + + D ++G
Sbjct: 186 ITYLAQ--TRDEQCLVAGCQDSVVRLLDCETG 215
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 50/232 (21%), Positives = 87/232 (37%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+ GH V A +++ + S D++I WDV+ G L H VR + +
Sbjct: 53 KTYGGHADEVTDAAGSCDSSYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNED 112
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDI-LLTGGRDSVCRVWD 287
+ S G D V CWD+ + + C+ T + + D R +D
Sbjct: 113 SSIAISGGRDNAVMCWDIRTRR-LDPVQVMKEARDCITTVATNENRIYAASLDGCVRTYD 171
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKS- 345
IR G T + TR D Q +V G DS ++ D G + H+
Sbjct: 172 IRVGELTCDKIGEPITYLAQ-TR--DEQCLVAGCQDSVVRLLDCETGGLLSEYRGHRGDD 228
Query: 346 --VRAMALHPTEDCFASASAENIKKFNLPKGEFLHNM-LSQQKTIINSMAVN 394
+ L +S + ++L G+ L + +S +++S+A +
Sbjct: 229 YHIECGILSNDAQIVTGSSDGDAFVYDLLDGKVLQRIRISDNGGVVHSLATH 280
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 249 (92.7 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 88/336 (26%), Positives = 146/336 (43%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K Y +SGH V V F + + S D TIK+WD G
Sbjct: 88 KRDPKEWIPRP----PEK-Y-ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGD 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+ TL GH + V+ ++ + S D +K WD + + IR+ HGH V + +
Sbjct: 142 FERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P D +++ RD ++W++ T + GH V V + + S+D T++ W
Sbjct: 202 PNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHP--TEDCFASASAENIKKFNLPKGEFLHNMLSQQKT 386
+ + L H+ V ++ P + A+ KK P G FL + S+ KT
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKP-GPFLLSG-SRDKT 319
Query: 387 I----------INSMAVNEE---GVLA-TGG-------DNGSLWFWDWKSGHNFQQAQTI 425
I + ++ ++ GVL GG D+ +L WD+K N + +T+
Sbjct: 320 IKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYK---NKRCMKTL 376
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
E + +L + +VT D+T+K+W
Sbjct: 377 SA-----HEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 173 (66.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
+GS D+TIK+WD++ G +TL GH VRG+ ++ S DDK ++ WD + +
Sbjct: 313 SGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRC 372
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+++ H V L H ++TG D +VW+ R
Sbjct: 373 MKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK +K WD+ + + GH + V + HP +++ D R+WD +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKN 369
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L+ H++ V S+ P VVTGS D T+K W+ R
Sbjct: 370 KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 246 (91.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 60/193 (31%), Positives = 92/193 (47%)
Query: 150 ERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTL 209
E+I + E H+ + Y + GH V V+ + W T S+D TIKIW L
Sbjct: 29 EQIHKRIRNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRL 88
Query: 210 KLTLTGH---IEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLG 266
+ TL GH I QV+ A SK Y+ SA DDK ++ WD E+ +R GH + V +
Sbjct: 89 ECTLFGHYRGISQVKW-ATGSK--YLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSID 145
Query: 267 LHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
+P +L++G D R+W+++ + L H + SV T S+D +
Sbjct: 146 FNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMAR 205
Query: 327 FWDLRYGKTMLTL 339
WD+ G+ + TL
Sbjct: 206 IWDVLSGQCLKTL 218
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 45/205 (21%), Positives = 93/205 (45%)
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
TL GH + V ++VS ++ ++ D +K W ++ + GH G+ +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 272 DILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L + D R+WD + + L GH N V S+ P +V+GS D T++ W+L+
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQ 168
Query: 332 YGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINS 390
G + L H + + ++++ A+AS + + + +++ G+ L ++ +++
Sbjct: 169 DGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSN 228
Query: 391 MAVNEEG-VLATGGDNGSLWFWDWK 414
+ E L N + WD++
Sbjct: 229 LQFTENRKYLLVSNLNSQIRLWDYR 253
Score = 162 (62.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 48/211 (22%), Positives = 88/211 (41%)
Query: 161 WHA-PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A ++ + GH + V + + + + S D+TI+IWD K L GH
Sbjct: 81 WSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNY 140
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + + T + S D+ V+ W+L+ +R H + + + + T
Sbjct: 141 VSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASY 200
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCS--VFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D + R+WD+ + + L N S FT ++ + +S I+ WD R + +
Sbjct: 201 DGMARIWDVLSGQCLKTLVEPINVPLSNLQFTE-NRKYLLVSNLNSQIRLWDYRRNRVVR 259
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAENIKK 368
H + +M+ DC++S +NI K
Sbjct: 260 IFDSHVNTRYSMSW----DCYSS---KNIPK 283
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 50/207 (24%), Positives = 87/207 (42%)
Query: 257 GHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
GH V C+ + P + T D ++W T L GH + V +
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASAS-AENIKKFNLPKGE 375
+ S D TI+ WD ++ L H V ++ +P S S E ++ +NL G
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171
Query: 376 FLHNMLSQQKTIINSMAVNEEGVL-ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSE 434
L + + + II S++++ +G L AT +G WD SG Q +T+V+P ++
Sbjct: 172 CLRMLPAHSEPII-SVSISADGTLCATASYDGMARIWDVLSG---QCLKTLVEPINVP-- 225
Query: 435 AGIYALSYDVTGSRLVTCEADKTIKMW 461
+ L + L+ + I++W
Sbjct: 226 --LSNLQFTENRKYLLVSNLNSQIRLW 250
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 243 (90.6 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 65/262 (24%), Positives = 124/262 (47%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
W+ +C Y ++SGH G + + + + + SAD T+ WD+ G GH E
Sbjct: 93 WNTYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEE 152
Query: 219 QVRGLAVSSKHTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
+ + +S + M SA DD + WD Q + I L + + + + +G
Sbjct: 153 VINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELP-ITAVAQSEAGNEVFSG 211
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR-YGKTM 336
G D+ VWDIR K ++++AGH +T+ S+ P +++ S DST++ WD+R + T
Sbjct: 212 GIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTN 271
Query: 337 LTL-TH-------HKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTI 387
+ T+ K +RA + +P D A+ S + ++ ++ G+ L+ + + T+
Sbjct: 272 RHIRTYDGAPVGLEKNLIRA-SWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTV 330
Query: 388 IN-SMAVNEEGVLATGGDNGSL 408
+ N E ++ + + +L
Sbjct: 331 NDVRFTPNNEPIIVSASSDRNL 352
Score = 198 (74.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 62/258 (24%), Positives = 117/258 (45%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLAVSSKH 229
++GH G V +V FD + +GS DR+I +W+ L+GH + L S
Sbjct: 62 LTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWSRDS 121
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT-IDILLTGGRDSVCRVWDI 288
+FSA D + WD+E + IR Y GH + + + ++L++ D +WD
Sbjct: 122 KTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDP 181
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
R K I L + + +V +V +G D+ I WD+R + ++ H ++ +
Sbjct: 182 RQKEAIDYLET-ELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITS 240
Query: 349 MALHPTEDCFASASAEN-IKKFNL----PKGEFLHNM----LSQQKTIINSMAVNEEG-V 398
+ + P S S ++ ++ +++ P + + +K +I + + N G
Sbjct: 241 LEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRA-SWNPAGDK 299
Query: 399 LATGGDNGSLWFWDWKSG 416
+A G + S+ WD+K+G
Sbjct: 300 IAAGSGDRSVVVWDFKTG 317
Score = 133 (51.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 266 GLHPTIDILLTGGRDSVCRVWDIRTK---MQIFALAGHDNTVCSVFTRPTDPQVVTGSHD 322
GL + ++ + G+D RT I L GH V +V PT + +GS D
Sbjct: 28 GLDNSAAVVKSSGQDGTLVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMD 87
Query: 323 STIKFWDLRYGK--TMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHN 379
+I W+ YG+ L+ HK ++ + SASA+ + +++ G+ +
Sbjct: 88 RSILLWNT-YGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRR 146
Query: 380 MLSQQKTIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGI 437
+ ++ +INS+ +++ G +L + D+G++ WD + Q + I L++E I
Sbjct: 147 YIGHEE-VINSVEISKRGQEMLVSASDDGTMGIWDPR------QKEAI---DYLETELPI 196
Query: 438 YALSYDVTGSRLVTCEADKTIKMW 461
A++ G+ + + D I +W
Sbjct: 197 TAVAQSEAGNEVFSGGIDNAIHVW 220
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/257 (19%), Positives = 102/257 (39%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLE---QNKVIRSYHGHLSGVYCLGL 267
+ LTGH +V + ++ S D+ + W+ +N I S GH + L
Sbjct: 60 MELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILS--GHKGAILDLQW 117
Query: 268 HPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSV-FTRPTDPQVVTGSHDSTIK 326
+ + D WDI + +I GH+ + SV ++ +V+ S D T+
Sbjct: 118 SRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMG 177
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD R K + + + A+A + S +N I +++ K +++M
Sbjct: 178 IWDPRQ-KEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMD 236
Query: 386 TIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
TI S+ V+ + L + + ++ WD + + + E + S++
Sbjct: 237 TI-TSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNP 295
Query: 445 TGSRLVTCEADKTIKMW 461
G ++ D+++ +W
Sbjct: 296 AGDKIAAGSGDRSVVVW 312
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 42/216 (19%), Positives = 91/216 (42%)
Query: 249 NKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFA-LAGHDNTVCSV 307
N I GH V+ + PT + +G D +W+ + + + L+GH + +
Sbjct: 56 NAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHKGAILDL 115
Query: 308 FTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPT-EDCFASASAENI 366
+ + S D T+ WD+ G+ + H++ + ++ + ++ SAS +
Sbjct: 116 QWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGT 175
Query: 367 KKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTI 425
P+ + + L + I ++A +E G + +GG + ++ WD + ++A
Sbjct: 176 MGIWDPRQKEAIDYLETELPI-TAVAQSEAGNEVFSGGIDNAIHVWDIR-----KKAIVY 229
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G +D+ I +L L++ D T++ W
Sbjct: 230 SMAGHMDT---ITSLEVSPDSQTLLSNSFDSTVRTW 262
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 251 (93.4 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 71/247 (28%), Positives = 104/247 (42%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+V+ GH G V S F ++ + S D +I+ WD+ T + GH V L +S
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPH 392
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA D + W ++ +R Y GHL+GV C+ HP + L TG D R+W
Sbjct: 393 SLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSA 452
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ + GH V C F+ P +V+ D +K WDL G L H +
Sbjct: 453 QQGNSVRLFTGHCGPVRCLAFS-PNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDIT 511
Query: 348 AMALHPTEDCFASASAEN------IK-KFN-LP----KGEFLHNMLSQQKTIINSMAVNE 395
++ ASAS +N IK K N P E L Q T++N +
Sbjct: 512 SVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQFMAG 571
Query: 396 EGVLATG 402
+L TG
Sbjct: 572 SRLLVTG 578
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 64/235 (27%), Positives = 96/235 (40%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ--NKVIRSYHGHLSGVYCL 265
T + L GH V + + S +D ++ WDLE N V+ Y GH V+ L
Sbjct: 330 TERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVL--YQGHAYPVWDL 387
Query: 266 GLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
+ P + D R+W + AGH V V P + TGS D T+
Sbjct: 388 DISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTV 447
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQ 384
+ W + G ++ T H VR +A P SA + + K ++L G L+ L
Sbjct: 448 RLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGT-LYKDLHGH 506
Query: 385 KTIINSMAVN-EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIY 438
I S+ + + V+A+ + S+ WD KS HN A GS G+Y
Sbjct: 507 TDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPAD-----GSSSELLGVY 556
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 43/217 (19%), Positives = 85/217 (39%)
Query: 257 GHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV 316
GH VY P LL+ D+ R WD+ + GH V + P
Sbjct: 337 GHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFF 396
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGE 375
+ S+D T + W + H V + HP + A+ S + ++ ++ +G
Sbjct: 397 ASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 456
Query: 376 FLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSE 434
+ + + + +A + G L + G++ L WD SG ++ G D
Sbjct: 457 SVR-LFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLH-----GHTDD- 509
Query: 435 AGIYALSYDVTGSRLVTCEADKTIKMW--REDETATP 469
I ++++ + S + + D ++++W + +TP
Sbjct: 510 --ITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTP 544
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 51/232 (21%), Positives = 89/232 (38%)
Query: 187 NTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDL 246
N TG + +IK+W + T K H Q+ VS H + D++ +
Sbjct: 280 NKLLATGLNNSSIKLWSL---TSKFKSKPH--QID---VSHIHLINDTLEVDEEDRT--A 329
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
+ KV+ GH VY P LL+ D+ R WD+ + GH V
Sbjct: 330 TERKVLL---GHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWD 386
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN- 365
+ P + S+D T + W + H V + HP + A+ S +
Sbjct: 387 LDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKT 446
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSG 416
++ ++ +G + + + + +A + G L + G++ L WD SG
Sbjct: 447 VRLWSAQQGNSVR-LFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASG 497
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 251 (93.4 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 65/208 (31%), Positives = 99/208 (47%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ-VRGLAVSSK 228
V SGH + S+ F H+ + +GS DRT ++WDV G L L IE V +A+S
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKL--EIENGVTAIAISPN 454
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
++ D+ ++ W + V R GH VY + P ILL+G D +VW++
Sbjct: 455 DQFIAVGSLDQIIRVWSVSGTLVER-LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
Query: 289 RTKMQIFALA------------GHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTM 336
+ + A GH + V SV P ++GS D +++FWDL+ G++
Sbjct: 514 QATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSY 573
Query: 337 LTLTHHKKSVRAMALHPTEDCFASASAE 364
LT HK SV ++ P FAS S +
Sbjct: 574 LTCQGHKNSVISVCFSPDGRQFASGSGD 601
Score = 232 (86.7 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 64/252 (25%), Positives = 116/252 (46%)
Query: 177 WVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAG 236
+VR++AF + TG+ DR IK+WD++ ++ +GH + + L S ++ S
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 237 DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFA 296
D+ + WD+E + I +GV + + P + G D + RVW + + +
Sbjct: 422 GDRTARLWDVETGQCILKLEIE-NGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTL-VER 479
Query: 297 LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTM------------LTLTHHKK 344
L GH +V S+ P +++GS D TIK W+L+ +++ T T H
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD 539
Query: 345 SVRAMALHPTEDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATG 402
V ++A+ P S S + +F +L G+ + ++I S+ + +G A+G
Sbjct: 540 FVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVI-SVCFSPDGRQFASG 598
Query: 403 -GD-NGSLWFWD 412
GD +W D
Sbjct: 599 SGDLRARIWSID 610
Score = 208 (78.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 67/264 (25%), Positives = 115/264 (43%)
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR +A S Y+ + +D+Q+K WDL KV + GH +Y L +++G
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D R+WD+ T I L +N V ++ P D + GS D I+ W + G + L
Sbjct: 423 DRTARLWDVETGQCILKLE-IENGVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERL 480
Query: 340 THHKKSVRAMALHPTEDCFASASAEN-IKKFNL------------PKGEFLHNMLSQQKT 386
HK+SV ++A P S S + IK + L P+G +
Sbjct: 481 EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEG-ICKATYTGHTD 539
Query: 387 IINSMAVNEEGVLA-TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
+ S+AV+ + +G + S+ FWD ++G ++ Q G +S + ++ +
Sbjct: 540 FVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQ-----GHKNS---VISVCFSPD 591
Query: 446 GSRLVTCEADKTIKMWREDETATP 469
G + + D ++W D A+P
Sbjct: 592 GRQFASGSGDLRARIWSIDP-ASP 614
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 38/140 (27%), Positives = 61/140 (43%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVA------------KGT 208
W + GH V S+AF ++ +GS D+TIK+W++ +G
Sbjct: 470 WSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGI 529
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
K T TGH + V +AVS + S D+ ++ WDL+ + + GH + V +
Sbjct: 530 CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFS 589
Query: 269 PTIDILLTGGRDSVCRVWDI 288
P +G D R+W I
Sbjct: 590 PDGRQFASGSGDLRARIWSI 609
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 48/216 (22%), Positives = 93/216 (43%)
Query: 258 HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFAL------AGHDNTVCSVFTRP 311
H S V C+ L TG + V+D++T ++F L D V ++ P
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCNQAA-NVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FN 370
+VTG+ D IK WDL K + H++ + ++ S S + + ++
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGS 430
+ G+ + + + +++ N++ +A G + + W SG T+V+
Sbjct: 431 VETGQCILKLEIENGVTAIAISPNDQ-FIAVGSLDQIIRVWS-VSG-------TLVERLE 481
Query: 431 LDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDET 466
E+ +Y++++ S L++ DKTIK+W T
Sbjct: 482 GHKES-VYSIAFSPDSSILLSGSLDKTIKVWELQAT 516
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 250 (93.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 73/262 (27%), Positives = 111/262 (42%)
Query: 161 WHAP-WKCYRVISGHLGWVRSVAF------DHSNTW-FCTGSADRTIKIWDVAKGTLKLT 212
W P + + + GH +V VA D N +G D +K+W
Sbjct: 288 WSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIAD 347
Query: 213 LTGHI-EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
+TGH+ +V +A ++ +A D + WDLEQ + GH V+CL H
Sbjct: 348 ITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDG 407
Query: 272 DILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
+L+TGG D+ RVWD+RT I L GH V V P + TGS D+T K WDLR
Sbjct: 408 SVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLR 467
Query: 332 YGKTMLTLTHHKKSVRAMALHPTEDCF-ASASAENIKKFNLPKG-EFLHNMLSQQKTIIN 389
+ + T+ H + + F + S ++ K K + L + +I+
Sbjct: 468 RRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVIS 527
Query: 390 -SMAVNEEGVLATGGDNG-SLW 409
+A N + + T D LW
Sbjct: 528 VDIAPNSQYIATTSFDRTFKLW 549
Score = 220 (82.5 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 78/300 (26%), Positives = 126/300 (42%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV-------SSKHT 230
V S AF ++ T S K+W V LK TL GH V G+A+
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVV 323
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG-VYCLGLHPTIDILLTGGRDSVCRVWDIR 289
M S G D VK W + I GH+ V + HP+ L T DS R+WD+
Sbjct: 324 AMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLE 383
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
K ++ GH V + +VTG D+ + WDLR G+ ++ L H +V +
Sbjct: 384 QKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGV 443
Query: 350 ALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEE--GVLATGGDNG 406
P A+ S +N K ++L + + ++ + +I+ + +E L T +
Sbjct: 444 DFSPNGFHIATGSQDNTCKIWDLRRRQPVYT-IPAHTNLISDVKYQQECGSFLVTCSYDS 502
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSR--LVTCEADKTIKMWRED 464
+ W S +Q +T+ G D++ +S D+ + + T D+T K+W D
Sbjct: 503 TTKIW---SNKTWQPLKTL--QGH-DNKV----ISVDIAPNSQYIATTSFDRTFKLWSPD 552
Score = 155 (59.6 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 60/265 (22%), Positives = 104/265 (39%)
Query: 215 GHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDI- 273
G V A S + + ++ K W + ++ ++ GH S V + L P +
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 274 ------LLTGGRDSVCRVWDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIK 326
+ +GG D ++W + I + GH + V V P+ + T +DS+ +
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWR 378
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQK 385
WDL +L H K V ++ H + + + ++L G + L
Sbjct: 379 LWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIM-FLEGHL 437
Query: 386 TIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
+ + + G +ATG + + WD + Q TI +L S+ Y
Sbjct: 438 GAVFGVDFSPNGFHIATGSQDNTCKIWDLRRR---QPVYTIPAHTNLISDVK-YQQE--- 490
Query: 445 TGSRLVTCEADKTIKMWREDETATP 469
GS LVTC D T K+W ++T P
Sbjct: 491 CGSFLVTCSYDSTTKIW-SNKTWQP 514
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 248 (92.4 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 62/255 (24%), Positives = 114/255 (44%)
Query: 161 WH-APW-KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVA-KGTLKLTLTGHI 217
W+ AP + +R + GH + V F S + + S D+T+++W + KG H
Sbjct: 45 WNLAPKARAFRFV-GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGE-STVFKAHT 102
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
VR + S + +A DDK VK W +E+ K + S + H + V C P ++ +
Sbjct: 103 ASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASC 162
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
G D R+WD + I + + V + + + D+TIK WD+R K +
Sbjct: 163 GDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQ 222
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V + HP+ + S S+++ IK +L +G ++ + + ++ +
Sbjct: 223 HYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDG 282
Query: 397 GVLATGGDNGSLWFW 411
+ A+GG + + W
Sbjct: 283 DLFASGGADSQVLMW 297
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 51/179 (28%), Positives = 82/179 (45%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++ H WVR F + DRT+++WD + T + + +S T
Sbjct: 140 LNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGT 199
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ S+G D +K WD+ NK+I+ Y H +GV C HP+ + L++G DS ++ D+
Sbjct: 200 CIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLE 259
Query: 291 KMQIFALAGHDNTVCSV-FTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT--LTHHKKSV 346
I+ L GH V +V F+R D +G DS + W + L+ H K V
Sbjct: 260 GRLIYTLHGHKGPVLTVTFSRDGD-LFASGGADSQVLMWKTNFDSLNYRELLSKHSKRV 317
Score = 192 (72.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 60/298 (20%), Positives = 123/298 (41%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + F+ +N TGS D+++ IW++A GH + + G+ +
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPS 71
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ + S+ D+ V+ W + H + V + L+T D +VW +
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGV 131
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
K +++L H N V C+ F+ P + + D T++ WD + + T + S
Sbjct: 132 ERKKFLYSLNRHTNWVRCARFS-PDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDN 405
+ + + C AS+ A+N IK +++ + + + +N + + G L +G +
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHY-KVHNAGVNCFSFHPSGNYLISGSSD 249
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMWR 462
++ D G ++ +L G + +++ G + AD + MW+
Sbjct: 250 STIKILDLLEGR-------LIY--TLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 175 (66.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 50/218 (22%), Positives = 96/218 (44%)
Query: 246 LEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVC 305
+E + R + GH + C +P L TG D +W++ K + F GH + +
Sbjct: 5 MEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVIT 64
Query: 306 SVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE- 364
V P+ V + S D T++ W H SVR++ +AS +
Sbjct: 65 GVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDK 124
Query: 365 NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQ 423
++K + + + +FL++ L++ + + +G ++A+ GD+ ++ WD S H Q
Sbjct: 125 SVKVWGVERKKFLYS-LNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD-TSSH---QCI 179
Query: 424 TIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
I D + ++ +G+ + + AD TIK+W
Sbjct: 180 NIFT----DYGGSATFVDFNSSGTCIASSGADNTIKIW 213
Score = 163 (62.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 51/255 (20%), Positives = 103/255 (40%)
Query: 208 TLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGL 267
TL+ GH + + + + + + DK + W+L + GH + +
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNF 68
Query: 268 HPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKF 327
P+ ++ + RD R+W K + H +V SV ++VT S D ++K
Sbjct: 69 APSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKT 386
W + K + +L H VR P AS + ++ ++ + + N+ +
Sbjct: 129 WGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCI-NIFTDYGG 187
Query: 387 IINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
+ N G +A+ G + ++ WD ++ Q + AG+ S+ +
Sbjct: 188 SATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKV--------HNAGVNCFSFHPS 239
Query: 446 GSRLVTCEADKTIKM 460
G+ L++ +D TIK+
Sbjct: 240 GNYLISGSSDSTIKI 254
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 250 (93.1 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 68/242 (28%), Positives = 105/242 (43%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY 231
SGH W+ F S + T S D TIK+WD+ KG LTL GH V S +
Sbjct: 399 SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDF 458
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ SA D K WD+ + + +GH V + P +ILLT D VWD RT
Sbjct: 459 VASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTG 518
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMAL 351
+L GH ++V P + + K WD R ++++ S +
Sbjct: 519 KCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNF 578
Query: 352 HPTEDCFASASAENI-KKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLW 409
+ A ASA I +L G+ +H ++ + + +S+ + G L +GG +G++
Sbjct: 579 DQSGRVLAQASANGIIHLLDLKSGQ-IHKLVGHESEV-HSVVFSHLGENLYSGGSDGTIR 636
Query: 410 FW 411
W
Sbjct: 637 LW 638
Score = 231 (86.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 68/270 (25%), Positives = 121/270 (44%)
Query: 194 SADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIR 253
S DR K+ + +G + LT +GH + + G + + ++ D +K WDL + +
Sbjct: 379 SEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTL 438
Query: 254 SYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTD 313
+ GH V+ H D + + D ++WD+ ++ + L GH ++V S+ P
Sbjct: 439 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS 498
Query: 314 PQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLP 372
++T S D T+ WD R GK +L H SV P AS A + K ++
Sbjct: 499 NILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFR 558
Query: 373 KGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSL 431
K + + + + N + ++ G VLA NG + D KSG Q +V
Sbjct: 559 KLIPIVS-IDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLKSG----QIHKLV----- 608
Query: 432 DSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
E+ ++++ + G L + +D TI++W
Sbjct: 609 GHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 244 WDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNT 303
+D + N + R H V C+ +HP D L++ D + ++ + + +GH +
Sbjct: 348 FDYKLNNIFRL---HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDW 404
Query: 304 VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASA 363
+ P+ ++ T S DSTIK WDL G+ LTL H +V + H D ASAS
Sbjct: 405 LSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASL 464
Query: 364 ENIKKFNLPKGEFLHNMLSQQKTIINSMAVNE-EGVLATGGDNGSLWFWDWKSGHNFQQA 422
+ K E L +NS+ +L T + +L WD ++G +
Sbjct: 465 DMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTG---KCE 521
Query: 423 QTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
Q++ G + S + ++ G + +C+A K+W
Sbjct: 522 QSLY--GHMHS---VNDATFTPRGHIIASCDARGVTKLW 555
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/186 (24%), Positives = 78/186 (41%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
Y+ S +D+ K L Q V+ + GH + HP+ L T DS ++WD+
Sbjct: 374 YLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNK 433
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA 350
L GH++ V S V + S D T K WD+ + TL H SV ++
Sbjct: 434 GECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIE 493
Query: 351 LHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSL 408
P + +ASA+ + ++ G+ ++ ++ N G ++A+ G
Sbjct: 494 FFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSV-NDATFTPRGHIIASCDARGVT 552
Query: 409 WFWDWK 414
WD++
Sbjct: 553 KLWDFR 558
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/203 (23%), Positives = 84/203 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GH V S + + + S D T KIWDV + TL GH + V +
Sbjct: 435 ECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEF 494
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
+ +A DK + WD K +S +GH+ V P I+ + V ++
Sbjct: 495 FPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKL 554
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD R + I ++ ++ V + + S + I DL+ G+ + L H+
Sbjct: 555 WDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLKSGQ-IHKLVGHESE 613
Query: 346 VRAMAL-HPTEDCFASASAENIK 367
V ++ H E+ ++ S I+
Sbjct: 614 VHSVVFSHLGENLYSGGSDGTIR 636
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 250 (93.1 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 56/199 (28%), Positives = 88/199 (44%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+ Y ++ GH G V S F + + SAD TI++W + GH V
Sbjct: 409 RSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQF 468
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
S Y S D+ + W +++ + +R GHLS V C+ HP + + TG D R+
Sbjct: 469 SPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRL 528
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD++T + GH + V S+ P + +G D TI WDL + + L H
Sbjct: 529 WDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSC 588
Query: 346 VRAMALHPTEDCFASASAE 364
V +++ AS SA+
Sbjct: 589 VWSLSYSGEGSLLASGSAD 607
Score = 212 (79.7 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 54/193 (27%), Positives = 87/193 (45%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
CY+ GH V F +F + S DRT +IW + + + GH+ V +
Sbjct: 455 CYK---GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWH 511
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
Y+ + DK V+ WD++ + +R + GH S V L + P + +G D +W
Sbjct: 512 PNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 571
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS- 345
D+ T I L GH++ V S+ + +GS D T+K WD+ T LT K
Sbjct: 572 DLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVT-SSTKLTKAEEKNGN 630
Query: 346 ---VRAMALHPTE 355
+R++ PT+
Sbjct: 631 SNRLRSLRTFPTK 643
Score = 194 (73.4 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 50/214 (23%), Positives = 98/214 (45%)
Query: 253 RSYH---GHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
RSY GH VY P D +L+ D+ R+W + + GH+ V
Sbjct: 409 RSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQF 468
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKK 368
P + SHD T + W + + + + H V + HP + A+ S++ ++
Sbjct: 469 SPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRL 528
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
+++ GE + + + ++ S+A++ +G +A+G ++G++ WD + +
Sbjct: 529 WDVQTGECVRIFIGHRSMVL-SLAMSPDGRYMASGDEDGTIMMWDLSTAR-------CIT 580
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
P + + +++LSY GS L + AD T+K+W
Sbjct: 581 P-LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 180 (68.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 49/213 (23%), Positives = 91/213 (42%)
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID 272
L GH V S ++ S+ D ++ W + N + Y GH V+ P
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
+ D R+W + + +AGH + V V P + TGS D T++ WD++
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Query: 333 GKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSM 391
G+ + H+ V ++A+ P AS + I ++L + ++ + S+
Sbjct: 534 GECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVW-SL 592
Query: 392 AVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQ 423
+ + EG +LA+G + ++ WD S +A+
Sbjct: 593 SYSGEGSLLASGSADCTVKLWDVTSSTKLTKAE 625
Score = 62 (26.9 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 168 YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAK 206
Y ++ H G + + H + G +D +IK+WD+AK
Sbjct: 346 YTFVNTHNG-LNCSSISHDGSLVAGGFSDSSIKVWDMAK 383
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 242 (90.2 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 72/234 (30%), Positives = 109/234 (46%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQN- 249
TG D IKIW+V G L L L+GH + VR L+ + S + SA DK ++ WDL ++
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHG 187
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K I+ GHL VYC + P +L + + +W +R+ I L GH ++V S
Sbjct: 188 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 247
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA---LHPTEDCFASASAENI 366
P +VT S+D+ + WD G+ + +L HH + AM +H + S E +
Sbjct: 248 SPDSALLVTASYDTNVIMWDPYTGERLRSL-HHTQVDPAMDDSDVHISSLRSVCFSPEGL 306
Query: 367 KKFNLPKGEFLHNMLSQQKTII------NSMAVN---EEGVLATGGDNGSLWFW 411
+ L + KT I N + GV+ATG +G + FW
Sbjct: 307 YLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFFPHGGVIATGTRDGHVQFW 360
Score = 184 (69.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 65/304 (21%), Positives = 127/304 (41%)
Query: 180 SVAFDHSNTWFCTGSADRTIKI--WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
SVAF +WF +K+ W + + + G + R S T +
Sbjct: 31 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIP---KGFEAKSRS---SKNETKGRGSPK 84
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-----ILLTGGRDSVCRVWDIRTKM 292
+K + C + + S HP + +L TG D ++W+++T +
Sbjct: 85 EKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGL 144
Query: 293 QIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDL-RYGKTMLTLTHHKKSVRAMA 350
+ L+GH + V + P+ + V+ S D T++ WDL ++GK + L+ H + V +
Sbjct: 145 LLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCS 204
Query: 351 LHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLW 409
+ P SA+ E ++ +++ + + Q ++++ + +L T + ++
Sbjct: 205 ISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVI 264
Query: 410 FWDWKSGHNFQQAQ-TIVQPGSLDSEAGIYALS---YDVTGSRLVTCEADKTIKMWREDE 465
WD +G + T V P DS+ I +L + G L T D+ +++W E
Sbjct: 265 MWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWAL-E 323
Query: 466 TATP 469
TP
Sbjct: 324 LKTP 327
Score = 161 (61.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 54/217 (24%), Positives = 91/217 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K +V+SGHL WV + + C+ + ++++ +W + TL L GH V
Sbjct: 188 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 247
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG------------HLSGVYCLGLHPTIDI 273
S + +A D V WD + +RS H H+S + + P
Sbjct: 248 SPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLY 307
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L T D + R+W + K I A A N +C F P + TG+ D ++FW
Sbjct: 308 LATVADDRLLRIWALELKTPI-AFAPMTNGLCCTFF-PHGGVIATGTRDGHVQFWTAP-- 363
Query: 334 KTMLTLTHH-KKSVRAMALHPTEDCFASASAENIKKF 369
+ + +L H +K++R+ T A + +K+F
Sbjct: 364 RVLSSLKHLCRKALRSFLT--TYQVLALPIPKKMKEF 398
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 72/234 (30%), Positives = 109/234 (46%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQN- 249
TG D IKIW+V G L L L+GH + VR L+ + S + SA DK ++ WDL ++
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHG 189
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K I+ GHL VYC + P +L + + +W +R+ I L GH ++V S
Sbjct: 190 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 249
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA---LHPTEDCFASASAENI 366
P +VT S+D+ + WD G+ + +L HH + AM +H + S E +
Sbjct: 250 SPDSALLVTASYDTNVIMWDPYTGERLRSL-HHTQVDPAMDDSDVHISSLRSVCFSPEGL 308
Query: 367 KKFNLPKGEFLHNMLSQQKTII------NSMAVN---EEGVLATGGDNGSLWFW 411
+ L + KT I N + GV+ATG +G + FW
Sbjct: 309 YLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFFPHGGVIATGTRDGHVQFW 362
Score = 184 (69.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 65/304 (21%), Positives = 127/304 (41%)
Query: 180 SVAFDHSNTWFCTGSADRTIKI--WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
SVAF +WF +K+ W + + + G + R S T +
Sbjct: 33 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIP---KGFEAKSRS---SKNETKGRGSPK 86
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-----ILLTGGRDSVCRVWDIRTKM 292
+K + C + + S HP + +L TG D ++W+++T +
Sbjct: 87 EKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGL 146
Query: 293 QIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDL-RYGKTMLTLTHHKKSVRAMA 350
+ L+GH + V + P+ + V+ S D T++ WDL ++GK + L+ H + V +
Sbjct: 147 LLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCS 206
Query: 351 LHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLW 409
+ P SA+ E ++ +++ + + Q ++++ + +L T + ++
Sbjct: 207 ISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVI 266
Query: 410 FWDWKSGHNFQQAQ-TIVQPGSLDSEAGIYALS---YDVTGSRLVTCEADKTIKMWREDE 465
WD +G + T V P DS+ I +L + G L T D+ +++W E
Sbjct: 267 MWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWAL-E 325
Query: 466 TATP 469
TP
Sbjct: 326 LKTP 329
Score = 161 (61.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 54/217 (24%), Positives = 91/217 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K +V+SGHL WV + + C+ + ++++ +W + TL L GH V
Sbjct: 190 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 249
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG------------HLSGVYCLGLHPTIDI 273
S + +A D V WD + +RS H H+S + + P
Sbjct: 250 SPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLY 309
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L T D + R+W + K I A A N +C F P + TG+ D ++FW
Sbjct: 310 LATVADDRLLRIWALELKTPI-AFAPMTNGLCCTFF-PHGGVIATGTRDGHVQFWTAP-- 365
Query: 334 KTMLTLTHH-KKSVRAMALHPTEDCFASASAENIKKF 369
+ + +L H +K++R+ T A + +K+F
Sbjct: 366 RVLSSLKHLCRKALRSFLT--TYQVLALPIPKKMKEF 400
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 242 (90.2 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 72/234 (30%), Positives = 109/234 (46%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQN- 249
TG D IKIW+V G L L L+GH + VR L+ + S + SA DK ++ WDL ++
Sbjct: 145 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHG 204
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K I+ GHL VYC + P +L + + +W +R+ I L GH ++V S
Sbjct: 205 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 264
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA---LHPTEDCFASASAENI 366
P +VT S+D+ + WD G+ + +L HH + AM +H + S E +
Sbjct: 265 SPDSALLVTASYDTNVIMWDPYTGERLRSL-HHTQVDPAMDDSDVHISSLRSVCFSPEGL 323
Query: 367 KKFNLPKGEFLHNMLSQQKTII------NSMAVN---EEGVLATGGDNGSLWFW 411
+ L + KT I N + GV+ATG +G + FW
Sbjct: 324 YLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFFPHGGVIATGTRDGHVQFW 377
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 65/304 (21%), Positives = 127/304 (41%)
Query: 180 SVAFDHSNTWFCTGSADRTIKI--WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
SVAF +WF +K+ W + + + G + R S T +
Sbjct: 48 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIP---KGFEAKSRS---SKNETKGRGSPK 101
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-----ILLTGGRDSVCRVWDIRTKM 292
+K + C + + S HP + +L TG D ++W+++T +
Sbjct: 102 EKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQTGL 161
Query: 293 QIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDL-RYGKTMLTLTHHKKSVRAMA 350
+ L+GH + V + P+ + V+ S D T++ WDL ++GK + L+ H + V +
Sbjct: 162 LLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCS 221
Query: 351 LHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLW 409
+ P SA+ E ++ +++ + + Q ++++ + +L T + ++
Sbjct: 222 ISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVI 281
Query: 410 FWDWKSGHNFQQAQ-TIVQPGSLDSEAGIYALS---YDVTGSRLVTCEADKTIKMWREDE 465
WD +G + T V P DS+ I +L + G L T D+ +++W E
Sbjct: 282 MWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWAL-E 340
Query: 466 TATP 469
TP
Sbjct: 341 LKTP 344
Score = 161 (61.7 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 54/217 (24%), Positives = 91/217 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K +V+SGHL WV + + C+ + ++++ +W + TL L GH V
Sbjct: 205 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 264
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG------------HLSGVYCLGLHPTIDI 273
S + +A D V WD + +RS H H+S + + P
Sbjct: 265 SPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLY 324
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L T D + R+W + K I A A N +C F P + TG+ D ++FW
Sbjct: 325 LATVADDRLLRIWALELKTPI-AFAPMTNGLCCTFF-PHGGVIATGTRDGHVQFWTAP-- 380
Query: 334 KTMLTLTHH-KKSVRAMALHPTEDCFASASAENIKKF 369
+ + +L H +K++R+ T A + +K+F
Sbjct: 381 RVLSSLKHLCRKALRSFLT--TYQVLALPIPKKMKEF 415
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 246 (91.7 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 61/218 (27%), Positives = 99/218 (45%)
Query: 161 WH-APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W A + YR+++GH + S+ F +GS DRT+ +WDV G KL L H +
Sbjct: 373 WDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL--HTDD 430
Query: 220 VRGLAVSSKHTYMFSAGD-DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ S +AG DK ++ W ++ HGH VY + P L++G
Sbjct: 431 GVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGS 489
Query: 279 RDSVCRVWDIRTKMQIF------------ALAGHDNTVCSVFTRPTDPQVVTGSHDSTIK 326
D+ ++W+++ + GH + + SV P +++GS D TI+
Sbjct: 490 LDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQ 549
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
FW + LTL H SV ++A+ P CFA+ S +
Sbjct: 550 FWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGD 587
Score = 242 (90.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 73/251 (29%), Positives = 111/251 (44%)
Query: 177 WVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAG 236
+VRSVAF + TG D+ I+IWD+A+ + LTGH +++ L S + S
Sbjct: 348 YVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 407
Query: 237 DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFA 296
D+ V WD+E + H GV + P + G D V R+W + +
Sbjct: 408 GDRTVCLWDVEAGEQKLILHTD-DGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTL-VEQ 465
Query: 297 LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR---------Y---GKTMLTLTHHKK 344
L GH+ +V SV P +V+GS D+TIK W+L+ Y G T T HK
Sbjct: 466 LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKD 525
Query: 345 SVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATG- 402
+ ++ + P S S + +F P L + S+AV+ G ATG
Sbjct: 526 FILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGS 585
Query: 403 GD-NGSLWFWD 412
GD +W ++
Sbjct: 586 GDLRARIWSYE 596
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 49/210 (23%), Positives = 91/210 (43%)
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
V + P L TG D R+WDI K L GH+ + S+ +V+GS
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNML 381
D T+ WD+ G+ L L H V + P A+ S + + + G + +
Sbjct: 409 DRTVCLWDVEAGEQKLIL-HTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLH 467
Query: 382 SQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGI--- 437
++++ S+A + +G L +G + ++ W+ + N A ++ + G + +
Sbjct: 468 GHEESVY-SVAFSPDGKYLVSGSLDNTIKLWELQCVSNV--APSMYKEGGICKQTFTGHK 524
Query: 438 -YALSYDVT--GSRLVTCEADKTIKMWRED 464
+ LS V+ G +++ D+TI+ W D
Sbjct: 525 DFILSVTVSPDGKWIISGSKDRTIQFWSPD 554
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C + +GH ++ SV W +GS DRTI+ W +LTL GH V +AVS
Sbjct: 516 CKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVS 575
Query: 227 SK-HTYMFSAGDDKQVKCWDLE 247
H + +GD + + W E
Sbjct: 576 PNGHCFATGSGD-LRARIWSYE 596
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 248 (92.4 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 65/247 (26%), Positives = 109/247 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H +R++ + + W + +K W + E +RGLA +
Sbjct: 170 ILQAHDSAIRALKWASNEQWLLSADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTD 229
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+A DD + WD + R GH + V C+ HPT ++ TG RD+ ++WD
Sbjct: 230 VKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWD 289
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
++ + L H ++V +V ++TG D +K +D+R K M T HKK V
Sbjct: 290 PKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVI 349
Query: 348 AMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQ-QKTIINSMAVNEEG-VLATGGD 404
++A HP E F S + + + GE +L I SM + G +LATG +
Sbjct: 350 SLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSN 409
Query: 405 NGSLWFW 411
+ + FW
Sbjct: 410 DNNTKFW 416
Score = 215 (80.7 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 70/292 (23%), Positives = 116/292 (39%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V SV + TG +W+ + L H +R L +S ++ SA
Sbjct: 136 VYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQ 195
Query: 238 DKQVKCWDLEQNKVIRSYHGHLS-GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFA 296
VK W N + H + L PT T D RVWD +
Sbjct: 196 GGYVKYWQPNMNNA-HMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERV 254
Query: 297 LAGHDNTVCSVFTRPTDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPT 354
L GH V + PT + TGS D+ +K WD + G + TL HK SV A+ +
Sbjct: 255 LRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKN 314
Query: 355 EDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVN--EEGVLATGGDNGSLWFW 411
+ + ++ +K +++ + + + +K +I S+A + EG+ +GG +GS+ +W
Sbjct: 315 GNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVI-SLAWHPIHEGLFVSGGGDGSIVYW 373
Query: 412 DWKSGHNFQQAQTIVQPGSLDS--EAGIYALSYDVTGSRLVTCEADKTIKMW 461
G + G L+ + I+++ + G L T D K W
Sbjct: 374 -MVDGEK--------EIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFW 416
Score = 204 (76.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 49/164 (29%), Positives = 77/164 (46%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSAD--RTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
RV+ GH VR + + + TGS D + +KIWD G+ TL H V + +
Sbjct: 253 RVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFN 312
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-ILLTGGRDSVCRV 285
++ + G D VK +D+ K +R+Y H V L HP + + ++GG D
Sbjct: 313 KNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVY 372
Query: 286 WDIRTKMQIFALA-GHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
W + + +I L HD + S+ P + TGS+D+ KFW
Sbjct: 373 WMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFW 416
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C + H V +V F+ + W TG D +K++D+ T H ++V LA
Sbjct: 295 CLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWH 354
Query: 227 SKHTYMF-SAGDDKQVKCWDLEQNKVIRSY-HGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
H +F S G D + W ++ K I H H ++ + HP IL TG D+ +
Sbjct: 355 PIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTK 414
Query: 285 VW 286
W
Sbjct: 415 FW 416
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 241 (89.9 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 75/262 (28%), Positives = 120/262 (45%)
Query: 150 ERIPSKW-PRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGT 208
+R P +W PRP P K ++GH + V F + S D TI+IWD G
Sbjct: 88 KRTPGEWIPRP----PEKFS--LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGE 141
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGL 267
+ +L GH + V+ +A ++ + S D +K WD +Q+ + I++ HGH V +
Sbjct: 142 YERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAF 201
Query: 268 HPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKF 327
P D +L+ RD ++W++ T + GH V V T S+D TI+
Sbjct: 202 VPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRV 261
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA---SASAENIKKFNLPKGEFLHNMLSQQ 384
W + L H+ +V +A P A +A A+N K + +G FL + S+
Sbjct: 262 WLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHH--QGPFLASG-SRD 318
Query: 385 KTI-INSMAVNEEGVLATGGDN 405
KTI I ++V + +G DN
Sbjct: 319 KTIRIWDVSVGLCLLTLSGHDN 340
Score = 206 (77.6 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 73/282 (25%), Positives = 120/282 (42%)
Query: 197 RTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYH 256
RT W + + K +LTGH + + M SA +D ++ WD E + RS
Sbjct: 89 RTPGEW-IPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLK 147
Query: 257 GHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ-IFALAGHDNTVCSVFTRPTDPQ 315
GH V + +L + D ++WD + + I + GHD+ V SV P
Sbjct: 148 GHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDY 207
Query: 316 VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGE 375
V++ S D TIK W++ G + T T H++ VR + +H FA+ S + + L +
Sbjct: 208 VLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSK 267
Query: 376 FLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHN---F----QQAQTI--- 425
L + + +A E + + D K GH+ F + +TI
Sbjct: 268 DCKVELRDHEHTVECIAWAPEAAASAINEAAGA---DNKKGHHQGPFLASGSRDKTIRIW 324
Query: 426 -VQPG-SLDSEAG----IYALSYDVTGSRLVTCEADKTIKMW 461
V G L + +G + L++ G LV+ DKTI++W
Sbjct: 325 DVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Score = 200 (75.5 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 185 HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCW 244
H + +GS D+TI+IWDV+ G LTL+GH VRGLA Y+ SA DDK ++ W
Sbjct: 307 HQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Query: 245 DLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
DL + +++ + H + H +++G D +VW+ R
Sbjct: 367 DLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
++ S DK ++ WD+ + + GH + V L HP L++ D RVWD+R
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
K + L H + S+ P V++GS D T+K W+ R
Sbjct: 371 KRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L +G RD R+WD+ + + L+GHDN V + P +V+ S D TI+ WDLR
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 334 KTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK 368
+ M TL H+ ++ H S S + K
Sbjct: 372 RCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVK 406
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C +SGH WVR +AF + + S D+TI++WD+ TL H +
Sbjct: 331 CLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFH 390
Query: 227 SKHTYMFSAGDDKQVKCWD 245
H Y+ S D+ VK W+
Sbjct: 391 KAHPYVISGSVDQTVKVWE 409
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 236 (88.1 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 70/255 (27%), Positives = 114/255 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK--LTLTGHIEQVRGLAVSS 227
++SGH G V F + + DR I +W+V G + TL GH V L ++
Sbjct: 51 LLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHYNT 109
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVW 286
+ +FSA DK V WD E + ++ GH S V C + TG D ++W
Sbjct: 110 DGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLW 169
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSV 346
DIR K + + V SV T Q+++G D+ IK WDLR K + ++ H SV
Sbjct: 170 DIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSV 228
Query: 347 RAMALHPTEDCFASASAEN-IKKFNL----PKGE----FLHNMLSQQKTIINSMAVNEEG 397
++L S S +N ++ +++ PK F N+ + +K ++ +
Sbjct: 229 TGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGS 288
Query: 398 VLATGGDNGSLWFWD 412
+A G + ++ WD
Sbjct: 289 KIAAGSADRFVYIWD 303
Score = 214 (80.4 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 65/205 (31%), Positives = 90/205 (43%)
Query: 171 ISGHLGWVRSVAFDHSNTWF-CTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 137 LKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTS 195
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+I S GH V L L LL+ D+ RVWDIR
Sbjct: 196 DQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIR 255
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS ++ GS D + WD + + L
Sbjct: 256 PFAPKERCVKIFQGNVHNFEKNLLRCS--WSADGSKIAAGSADRFVYIWDTTTRRIVYKL 313
Query: 340 THHKKSVRAMALHPTEDCFASASAE 364
H SV +A HP E S S++
Sbjct: 314 PGHAGSVNEVAFHPEEPIVLSGSSD 338
Score = 205 (77.2 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 43/174 (24%), Positives = 83/174 (47%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
W+ C Y + GH G V + ++ + + S D+T+ +WD G L GH
Sbjct: 83 WNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTS 142
Query: 219 QVRGLAVSSKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
V + + + G DD VK WD+ + + ++ V + + T D +++G
Sbjct: 143 FVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQ-VLSVTFNDTSDQIISG 201
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
G D+ +VWD+R I+++ GH ++V + +++ S D++++ WD+R
Sbjct: 202 GIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIR 255
Score = 203 (76.5 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 63/257 (24%), Positives = 117/257 (45%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + S+G D+ + W++ + + + GH V + LH
Sbjct: 50 MLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAV--MELHY 107
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S F PQ+ TGS D T+K
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R ++ T + V ++ + T D S +N IK ++L + + +++M
Sbjct: 168 LWDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGD 226
Query: 386 TIIN-SMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
++ S++ + +L+ DN S+ WD + ++ I Q + E + S+
Sbjct: 227 SVTGLSLSADGSYLLSNSMDN-SVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSA 285
Query: 445 TGSRLVTCEADKTIKMW 461
GS++ AD+ + +W
Sbjct: 286 DGSKIAAGSADRFVYIW 302
Score = 182 (69.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/162 (25%), Positives = 80/162 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V SV F+ ++ +G D IK+WD+ + L ++ GH + V GL++S+ +Y+ S
Sbjct: 186 VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSM 245
Query: 238 DKQVKCWDLE----QNKVIRSYHGHLSGVY--CLGLHPTID--ILLTGGRDSVCRVWDIR 289
D V+ WD+ + + ++ + G++ L + D + G D +WD
Sbjct: 246 DNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTT 305
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
T+ ++ L GH +V V P +P V++GS D + +++
Sbjct: 306 TRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 241 (89.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 58/252 (23%), Positives = 113/252 (44%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVR 221
HA + YR + GH V SV F + S DRT+++W K H VR
Sbjct: 50 HA--RAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVR 106
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDS 281
+ S+ ++ +A +DK +K W + + + + S + H V C P ++++ D
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 282 VCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
++WD K + + V P+ + + D T+K WD+R K +
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL- 399
H V ++ HP+++ +AS++ +K +L +G ++ + + +++ ++ G L
Sbjct: 227 HSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGGELF 285
Query: 400 ATGGDNGSLWFW 411
A+GG + + W
Sbjct: 286 ASGGADTQVLLW 297
Score = 228 (85.3 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 58/223 (26%), Positives = 96/223 (43%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
NL SA +R W P+ + ++ H VRSV F + T S D++IK+
Sbjct: 73 NLLASASRDRTVRLWI-PDKRGKFSEFKA---HTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
W + + +L H VR S + S +DK +K WD + + ++ +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ +P+ + + G D +VWD+R + H V + P+D +VT S
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASS 248
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
D T+K DL G+ + TL H V ++ + FAS A+
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 181 (68.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 61/297 (20%), Positives = 115/297 (38%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + S+ + T S D + +W+ GH + V + S
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA D+ V+ W ++ + H + V + L T D +VW +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ +++L H + V C+ F+ P +V+ S D TIK WD + + +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 348 AMALHPTEDCFASA-SAENIKKFNLPKGEFLHNMLSQQKTIINSMAVN-EEGVLATGGDN 405
+ +P+ C ASA S + +K +++ + L + + N ++ + + L T +
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSDNYLVTASSD 249
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
G+L D G Q P ++ +S+ G + AD + +WR
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGP--------VFTVSFSKGGELFASGGADTQVLLWR 298
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 244 (91.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 88/318 (27%), Positives = 133/318 (41%)
Query: 165 WK---C-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
WK C + GH V + F+ + TGS D TIKIWD G TL GH +
Sbjct: 335 WKYGRCSIKTFKGHTNGVMCLQFE--DNILATGSYDTTIKIWDTETGEELRTLRGHESGI 392
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
R L T + S D+ +K W+ + I +Y GH GV +GLH IL +G D
Sbjct: 393 RCLQFDD--TKLISGSMDRTIKVWNWRTGECISTYTGHRGGV--IGLHFDASILASGSVD 448
Query: 281 SVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLT 340
++W+ K F+L GH + V +V + V + S D T++ WDL KT +
Sbjct: 449 KTVKIWNFEDK-STFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDT-KTCIRTF 506
Query: 341 H-HKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV 398
H H V+ + P E F AE + G+ + + + A ++
Sbjct: 507 HGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSSA 566
Query: 399 LATGGDNG---------------SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
T DNG ++ W+ +G + T G L+ G++AL D
Sbjct: 567 FGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLR---TFF--GHLE---GVWALGAD 618
Query: 444 VTGSRLVTCEADKTIKMW 461
R+V+ D+ IK+W
Sbjct: 619 TL--RIVSGAEDRMIKIW 634
Score = 186 (70.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 66/222 (29%), Positives = 97/222 (43%)
Query: 146 SAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVA 205
S M+R W W +C +GH G V + FD S +GS D+T+KIW+
Sbjct: 404 SGSMDRTIKVW---NWRTG-ECISTYTGHRGGVIGLHFDASI--LASGSVDKTVKIWNFE 457
Query: 206 -KGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYC 264
K T +L GH + V + V + +FSA DD V+ WDL+ IR++HGH+ V
Sbjct: 458 DKSTF--SLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQ- 514
Query: 265 LGLHPTIDILLTGGRDSVCRVWDIRTKM------QIFALAGHDNTVC----SVFT----- 309
+ P D+ C D+ T I A G + S F
Sbjct: 515 -QVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSSAFGTSFDN 573
Query: 310 -RPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
R P+ +VT + DSTI+ W+ G+ + T H + V A+
Sbjct: 574 GRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWAL 615
Score = 146 (56.5 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 56/221 (25%), Positives = 88/221 (39%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W+ K + GH WV +V D S+ + S D T+++WD+ T T GH+ QV
Sbjct: 454 WNFEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQV 513
Query: 221 RGLAVSSKHTYMFSA------GDDKQVKCWDLEQNKVIRSYHGHLSGVYCLG--LHPTID 272
+ + V + F DD D + + S + Y + D
Sbjct: 514 QQV-VPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSSAFGTSFD 572
Query: 273 --------ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDP-QVVTGSHDS 323
++T DS R+W+ T + GH + V+ D ++V+G+ D
Sbjct: 573 NGRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGH---LEGVWALGADTLRIVSGAEDR 629
Query: 324 TIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
IK WD R GK T T H V + L + FA+ S +
Sbjct: 630 MIKIWDPRTGKCERTFTGHSGPVTCIGLGDSR--FATGSED 668
Score = 139 (54.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 44/175 (25%), Positives = 75/175 (42%)
Query: 291 KMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ I GH N V C F D + TGS+D+TIK WD G+ + TL H+ +R +
Sbjct: 339 RCSIKTFKGHTNGVMCLQFE---DNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCL 395
Query: 350 ALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLW 409
T+ + + IK +N GE + + +I + +LA+G + ++
Sbjct: 396 QFDDTK-LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DASILASGSVDKTVK 452
Query: 410 FWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
W NF+ T G D + A+ D + + + D T+++W D
Sbjct: 453 IW------NFEDKSTFSLRGHTD---WVNAVRVDTSSRTVFSASDDCTVRLWDLD 498
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
YM ++ D ++ W+ + +R++ GHL GV+ LG T+ I+ +G D + ++WD RT
Sbjct: 581 YMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGAD-TLRIV-SGAEDRMIKIWDPRT 638
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
GH V + D + TGS D ++ + +
Sbjct: 639 GKCERTFTGHSGPVTCIGLG--DSRFATGSEDCEVRMYSFQ 677
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 234 (87.4 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 61/205 (29%), Positives = 87/205 (42%)
Query: 169 RVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSS 227
R GH +V SV C+GS DRTIKIWD K TL QV +
Sbjct: 134 RRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPF-QVTAVCFGD 192
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
+ S G D +VK WD+ + V+ GH + + L P D +LT D+ RVWD
Sbjct: 193 TGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWD 252
Query: 288 IRT----KMQIFALAGHDNTVCSVFTR----PTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
+R + + GH + R P ++ +GS D + WD+ + + L
Sbjct: 253 VRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKL 312
Query: 340 THHKKSVRAMALHPTEDCFASASAE 364
H SV A+ P E S S++
Sbjct: 313 PGHNGSVNAVDFSPKEPLILSGSSD 337
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 49/197 (24%), Positives = 85/197 (43%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK-LTLTGHIEQVRGLAVSSKH 229
+ GH G + + F + DR I IW V + + ++GH V +
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCL-GLHPTIDILLTGGRDSVCRVWDI 288
+++F+ DK + WD+ + R + GH + V + G +L +G D ++WD
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA 170
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
R K L V +V T QV++G D+ +K WD+R + L H ++
Sbjct: 171 RKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITG 229
Query: 349 MALHPTEDCFASASAEN 365
M+L P D + + +N
Sbjct: 230 MSLSPEGDFILTNAMDN 246
Score = 183 (69.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 39/157 (24%), Positives = 77/157 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V +V F + +G D +KIWD+ K + L GH + + G+++S + ++ +
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 238 DKQVKCWDLEQ----NKVIRSYHGHLSG-----VYCLGLHPTIDILLTGGRDSVCRVWDI 288
D ++ WD+ + ++ + GH + C P D + +G D +WD+
Sbjct: 245 DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRC-AWSPGSDKITSGSADRHVYIWDV 303
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
T+ ++ L GH+ +V +V P +P +++GS D T+
Sbjct: 304 NTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTL 340
Score = 181 (68.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 62/256 (24%), Positives = 107/256 (41%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDL-EQNKVIRSYHGHLSGVYCLGLHP 269
+ L GH ++ + + S+G D+Q+ W + E + + + GH V P
Sbjct: 49 MQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTP 108
Query: 270 TIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIKFW 328
+ T D WDI T + GH N V SV Q++ +GS D TIK W
Sbjct: 109 DGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIW 168
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTI 387
D R TL V A+ T + S +N +K +++ K LH++ TI
Sbjct: 169 DARKKHAAHTL-ESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTI 227
Query: 388 INSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
M+++ EG +L DN +L WD + ++ + Q + E + ++
Sbjct: 228 -TGMSLSPEGDFILTNAMDN-TLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPG 285
Query: 446 GSRLVTCEADKTIKMW 461
++ + AD+ + +W
Sbjct: 286 SDKITSGSADRHVYIW 301
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 51/213 (23%), Positives = 88/213 (41%)
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ-IFALAGHDNTVCSVFTR 310
I GH ++ HP ++LL+ G D +W + + + A++GH V
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT 107
Query: 311 PTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM-ALHPTEDCFASASAEN-IKK 368
P + T S D T+ FWD+ G+ H V ++ + S S + IK
Sbjct: 108 PDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQP 428
++ K H + S + E V++ G DN + WD + +QA
Sbjct: 168 WDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDN-EVKIWDIR-----KQAVLHHLR 221
Query: 429 GSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ G+ +LS + G ++T D T+++W
Sbjct: 222 GHSDTITGM-SLSPE--GDFILTNAMDNTLRVW 251
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 243 (90.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 63/258 (24%), Positives = 124/258 (48%)
Query: 169 RVISGH-LGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSS 227
+ + GH +G V +D+ +G DR +++W++A G L GH VR L +S
Sbjct: 286 KTLEGHVMGVWAMVPWDNI---LVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSD 342
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
K+T + S D ++ WDL GH + V CL +H DI+++G D+ RVW
Sbjct: 343 KNTAI-SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHG--DIVVSGSYDTTARVWS 399
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
I + AL+GH + + ++ ++ TGS D++++ WD G+ L H V
Sbjct: 400 ISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVG 457
Query: 348 AMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNG 406
+ + + D + ++ +++ ++L + +H + + ++ + N + +GG +G
Sbjct: 458 QLQM--SGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFDNNR--IVSGGSDG 513
Query: 407 SLWFWDWKSGHNFQQAQT 424
+ W ++G ++ T
Sbjct: 514 RVKVWCLRTGQLLRELST 531
Score = 233 (87.1 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 75/251 (29%), Positives = 131/251 (52%)
Query: 216 HIEQVRGLAVSSKHT--YMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLGLHPTID 272
HI +G+ S T Y+ ++ D+ ++ +D +N+ ++ GH+ GV+ + P +
Sbjct: 248 HISPDQGVVTSLHLTPKYIVASLDNAKIHVYDTNGENQ--KTLEGHVMGVWAMV--PWDN 303
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLR 331
IL++GG D RVW++ T I+ L GH +TV + + +D ++GS D+T++ WDLR
Sbjct: 304 ILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCL--KMSDKNTAISGSRDTTLRIWDLR 361
Query: 332 YGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINS 390
G L H+ SVR +A+H D S S + + +++ +G FL LS + I +
Sbjct: 362 TGTCRSVLVGHQASVRCLAVHG--DIVVSGSYDTTARVWSISEGRFLR-ALSGHFSQIYA 418
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
+A + + ATG + S+ WD +G Q I+Q + S G +S G LV
Sbjct: 419 IAFDGRRI-ATGSLDTSVRIWDPNTG----QCHAILQGHT--SLVGQLQMS----GDTLV 467
Query: 451 TCEADKTIKMW 461
T +D ++++W
Sbjct: 468 TGGSDGSVRVW 478
Score = 225 (84.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 62/240 (25%), Positives = 104/240 (43%)
Query: 161 WH-APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W+ A + ++ GH VR + NT +GS D T++IWD+ GT + L GH
Sbjct: 317 WNMATGESIYLLRGHTSTVRCLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRSVLVGHQAS 375
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR LAV + S D + W + + + +R+ GH S +Y + + TG
Sbjct: 376 VRCLAVHGD--IVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRR--IATGSL 431
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D+ R+WD T L GH + V + + + +VTG D +++ W L + L
Sbjct: 432 DTSVRIWDPNTGQCHAILQGHTSLVGQL--QMSGDTLVTGGSDGSVRVWSLTRMAPIHRL 489
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL 399
H SV ++ + S +K + L G+ L + + T+ E+ V+
Sbjct: 490 AAHDNSVTSLQFDNNR-IVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVI 548
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 70/233 (30%), Positives = 108/233 (46%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQN- 249
TG D IKIW+V G L L L+GH + VR L+ + S + SA DK ++ WDL ++
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHG 187
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K I+ GHL VYC + P +L + + +W +R+ I L GH ++V S
Sbjct: 188 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 247
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS--VRAMALHPTEDCFASASAENIK 367
P +VT S+D+ + WD G+ + +L H + S + +H + S E +
Sbjct: 248 SPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSDVHISSLRSVCFSPEGLY 307
Query: 368 KFNLPKGEFLHNMLSQQKTII------NSMAVN---EEGVLATGGDNGSLWFW 411
+ L + KT I N + GV+ATG +G + FW
Sbjct: 308 LATVADDRLLRIWALELKTPIAFAPMTNGLCCTFFPHGGVIATGTRDGHVQFW 360
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 53/227 (23%), Positives = 105/227 (46%)
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K+ +H + V CL IL TG D ++W+++T + + L+GH + V +
Sbjct: 109 KLWARHHPQVPDVSCL-------ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSF 161
Query: 310 RPTDPQV-VTGSHDSTIKFWDL-RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NI 366
P+ + V+ S D T++ WDL ++GK + L+ H + V ++ P SA+ E ++
Sbjct: 162 TPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSV 221
Query: 367 KKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQ-TI 425
+++ + + Q ++++ + +L T + ++ WD +G + T
Sbjct: 222 FLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQ 281
Query: 426 VQPGSLDSEAGIYALS---YDVTGSRLVTCEADKTIKMWREDETATP 469
+ P DS+ I +L + G L T D+ +++W E TP
Sbjct: 282 LSPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWAL-ELKTP 327
Score = 161 (61.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 54/217 (24%), Positives = 91/217 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K +V+SGHL WV + + C+ + ++++ +W + TL L GH V
Sbjct: 188 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 247
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG------------HLSGVYCLGLHPTIDI 273
S + +A D V WD + +RS H H+S + + P
Sbjct: 248 SPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSDVHISSLRSVCFSPEGLY 307
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L T D + R+W + K I A A N +C F P + TG+ D ++FW
Sbjct: 308 LATVADDRLLRIWALELKTPI-AFAPMTNGLCCTFF-PHGGVIATGTRDGHVQFWTAP-- 363
Query: 334 KTMLTLTHH-KKSVRAMALHPTEDCFASASAENIKKF 369
+ + +L H +K++R+ T A + +K+F
Sbjct: 364 RVLSSLKHLCRKALRSFLT--TYQVLALPIPKKMKEF 398
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 74/254 (29%), Positives = 117/254 (46%)
Query: 177 WVRS--VAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS-SKHTYMF 233
W R A D S TG D IKIW+V G L L L+GH + VR L+ + S +
Sbjct: 111 WARHHPQAPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 170
Query: 234 SAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM 292
SA DK ++ WDL ++ K I+ GHL VYC + P +L + + +W +R+
Sbjct: 171 SASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYT 230
Query: 293 QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH----------- 341
I L GH ++V S P +VT S+D+++ WD G+ + +L H
Sbjct: 231 LIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSD 290
Query: 342 -HKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVN---EEG 397
H S+R++ P E + + A++ + + E + T N + G
Sbjct: 291 VHMSSLRSVCFSP-EGLYLATVADD-RLLRIWALELKAPVAFAPMT--NGLCCTFFPHGG 346
Query: 398 VLATGGDNGSLWFW 411
++ATG +G + FW
Sbjct: 347 IIATGTRDGHVQFW 360
Score = 178 (67.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 44/196 (22%), Positives = 96/196 (48%)
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDL- 330
IL TG D ++W+++T + + L+GH + V + P+ + V+ S D T++ WDL
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIIN 389
++GK + L+ H + V ++ P SA+ E ++ +++ + + Q ++++
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 244
Query: 390 SMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQ-TIVQPGSLDSE---AGIYALSYDVT 445
+ +L T + S+ WD +G + T ++P DS+ + + ++ +
Sbjct: 245 CDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPE 304
Query: 446 GSRLVTCEADKTIKMW 461
G L T D+ +++W
Sbjct: 305 GLYLATVADDRLLRIW 320
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 53/217 (24%), Positives = 91/217 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K +V+SGHL WV + + C+ + ++++ +W + TL L GH V
Sbjct: 188 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 247
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG------------HLSGVYCLGLHPTIDI 273
S + +A D V WD + +RS H H+S + + P
Sbjct: 248 SPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLY 307
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L T D + R+W + K + A A N +C F P + TG+ D ++FW
Sbjct: 308 LATVADDRLLRIWALELKAPV-AFAPMTNGLCCTFF-PHGGIIATGTRDGHVQFWTAP-- 363
Query: 334 KTMLTLTHH-KKSVRAMALHPTEDCFASASAENIKKF 369
+ + +L H +K++R+ T A + +K+F
Sbjct: 364 RVLSSLKHLCRKALRSFLT--TYQVLALPIPKKMKEF 398
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 235 (87.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/259 (27%), Positives = 116/259 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLAVSSK 228
++SGH G V F + + + DR I +W+V TL GH V L ++
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 120
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVWD 287
+ +FSA DK V WD E + ++ GH S V C ++ TG D ++WD
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 288 IRTKMQIFALAGHDNT--VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
IR K A+ NT V +V T Q+++G D+ IK WDLR K T+ H S
Sbjct: 181 IRKKA---AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 237
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNL----PKGE----FLHNMLSQQKTIINSMAVNEE 396
V ++L S + +N ++ +++ PK F N+ + +K ++ +
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 297
Query: 397 GVLATGGDNGSLWFWDWKS 415
+A G + ++ WD S
Sbjct: 298 SKIAAGSADRFVYVWDTTS 316
Score = 224 (83.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 63/205 (30%), Positives = 91/205 (44%)
Query: 171 ISGHLGWVRSV-AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 205
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+ + GH V L L LL+ D+ RVWD+R
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS P ++ GS D + WD + + L
Sbjct: 266 PFAPKERCVKIFQGNVHNFEKNLLRCS--WSPDGSKIAAGSADRFVYVWDTTSRRILYKL 323
Query: 340 THHKKSVRAMALHPTEDCFASASAE 364
H S+ +A HP E SAS++
Sbjct: 324 PGHAGSINEVAFHPDEPIIISASSD 348
Score = 207 (77.9 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 43/174 (24%), Positives = 82/174 (47%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
W+ C Y + GH G V + ++ + + S D+T+ +WD G L GH
Sbjct: 93 WNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS 152
Query: 219 QVRGLAVSSKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
V + + + G DD VK WD+ + I+++ V + + T D +++G
Sbjct: 153 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISG 211
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
G D+ +VWD+R + + GH ++V + +++ + D+T++ WD+R
Sbjct: 212 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 206 (77.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 65/258 (25%), Positives = 117/258 (45%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + + SAG D+ + W++ + + GH V + LH
Sbjct: 60 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV--MELHY 117
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S + PQ+V TGS D T+K
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R K + + V A+ + T D S +N IK ++L + + + M
Sbjct: 178 LWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 236
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ ++++ EG +L+ DN ++ WD + ++ I Q + E + S+
Sbjct: 237 SV-TGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 294
Query: 444 VTGSRLVTCEADKTIKMW 461
GS++ AD+ + +W
Sbjct: 295 PDGSKIAAGSADRFVYVW 312
Score = 186 (70.5 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 40/163 (24%), Positives = 80/163 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V +V F+ ++ +G D IK+WD+ + L T+ GH + V GL++SS+ +Y+ S
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 255
Query: 238 DKQVKCWDLE----QNKVIRSYHGHLSG-----VYCLGLHPTIDILLTGGRDSVCRVWDI 288
D V+ WD+ + + ++ + G++ + C P + G D VWD
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDT 314
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
++ ++ L GH ++ V P +P +++ S D + +++
Sbjct: 315 TSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 294 IFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGK--TMLTLTHHKKSVRAMA 350
I L+GH+ V C F P + + D I W++ YG TL H +V M
Sbjct: 59 IMLLSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV--ME 114
Query: 351 LHPTED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDN 405
LH D F++++ + + ++ GE + L + +NS G ++ TG D+
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDD 173
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--RE 463
G++ WD + Q Q Q + A++++ T ++++ D IK+W R+
Sbjct: 174 GTVKLWDIRKKAAIQTFQNTYQ---------VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 464 DE-TATPETH 472
++ T T H
Sbjct: 225 NKLTYTMRGH 234
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/234 (30%), Positives = 107/234 (45%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQN- 249
TG D IKIW+V G L L L+GH + VR L+ + S + SA DK ++ WDL ++
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHG 189
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K I+ GHL VYC + P +L + + +W +R+ I L GH ++V S
Sbjct: 190 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 249
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA---LHPTEDCFASASAENI 366
P +VT S+D+ + WD G+ L L HH + M +H + S E +
Sbjct: 250 SPDSALLVTASYDTNVIMWDPYTGER-LRLLHHTQLDPPMDDSDVHISSLRSVCFSPEGL 308
Query: 367 KKFNLPKGEFLHNMLSQQKTII------NSMAVN---EEGVLATGGDNGSLWFW 411
+ L + KT I N + GV+ATG +G + FW
Sbjct: 309 YLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFFPHGGVIATGTRDGHVQFW 362
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/304 (21%), Positives = 127/304 (41%)
Query: 180 SVAFDHSNTWFCTGSADRTIKI--WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
SVAF +WF +K+ W + + + G + R S T +
Sbjct: 33 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIP---KGFEAKSRS---SKNDTKGRGSPK 86
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-----ILLTGGRDSVCRVWDIRTKM 292
+K + C + + S HP + IL TG D ++W+++T +
Sbjct: 87 EKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDISCLILATGLNDGQIKIWEVQTGL 146
Query: 293 QIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDL-RYGKTMLTLTHHKKSVRAMA 350
+ L+GH + V + P+ + V+ S D T++ WDL ++GK + L+ H + V +
Sbjct: 147 LLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCS 206
Query: 351 LHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLW 409
+ P SA+ E ++ +++ + + Q ++++ + +L T + ++
Sbjct: 207 ISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVI 266
Query: 410 FWDWKSGHNFQQAQ-TIVQPGSLDSEAGIYALS---YDVTGSRLVTCEADKTIKMWREDE 465
WD +G + T + P DS+ I +L + G L T D+ +++W E
Sbjct: 267 MWDPYTGERLRLLHHTQLDPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWAL-E 325
Query: 466 TATP 469
TP
Sbjct: 326 LKTP 329
Score = 155 (59.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 53/217 (24%), Positives = 90/217 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K +V+SGHL WV + + C+ + ++++ +W + TL L GH V
Sbjct: 190 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 249
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG------------HLSGVYCLGLHPTIDI 273
S + +A D V WD + +R H H+S + + P
Sbjct: 250 SPDSALLVTASYDTNVIMWDPYTGERLRLLHHTQLDPPMDDSDVHISSLRSVCFSPEGLY 309
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L T D + R+W + K I A A N +C F P + TG+ D ++FW
Sbjct: 310 LATVADDRLLRIWALELKTPI-AFAPMTNGLCCTFF-PHGGVIATGTRDGHVQFWTAP-- 365
Query: 334 KTMLTLTHH-KKSVRAMALHPTEDCFASASAENIKKF 369
+ + +L H +K++R+ T A + +K+F
Sbjct: 366 RVLSSLKHLCRKALRSFLT--TYQVLALPIPKKMKEF 400
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 235 (87.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/259 (27%), Positives = 116/259 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLAVSSK 228
++SGH G V F + + + DR I +W+V TL GH V L ++
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVWD 287
+ +FSA DK V WD E + ++ GH S V C ++ TG D ++WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 288 IRTKMQIFALAGHDNT--VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
IR K A+ NT V +V T Q+++G D+ IK WDLR K T+ H S
Sbjct: 182 IRKKA---AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNL----PKGE----FLHNMLSQQKTIINSMAVNEE 396
V ++L S + +N ++ +++ PK F N+ + +K ++ +
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDG 298
Query: 397 GVLATGGDNGSLWFWDWKS 415
+A G + ++ WD S
Sbjct: 299 SKIAAGSADRFVYVWDTTS 317
Score = 224 (83.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 63/205 (30%), Positives = 91/205 (44%)
Query: 171 ISGHLGWVRSV-AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+ + GH V L L LL+ D+ RVWD+R
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS P ++ GS D + WD + + L
Sbjct: 267 PFAPKERCVRIFQGNVHNFEKNLLRCS--WSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 340 THHKKSVRAMALHPTEDCFASASAE 364
H S+ +A HP E SAS++
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSD 349
Score = 207 (77.9 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 43/174 (24%), Positives = 82/174 (47%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
W+ C Y + GH G V + ++ + + S D+T+ +WD G L GH
Sbjct: 94 WNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS 153
Query: 219 QVRGLAVSSKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
V + + + G DD VK WD+ + I+++ V + + T D +++G
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISG 212
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
G D+ +VWD+R + + GH ++V + +++ + D+T++ WD+R
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 206 (77.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 65/258 (25%), Positives = 117/258 (45%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + + SAG D+ + W++ + + GH V + LH
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV--MELHY 118
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S + PQ+V TGS D T+K
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R K + + V A+ + T D S +N IK ++L + + + M
Sbjct: 179 LWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ ++++ EG +L+ DN ++ WD + ++ I Q + E + S+
Sbjct: 238 SV-TGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWS 295
Query: 444 VTGSRLVTCEADKTIKMW 461
GS++ AD+ + +W
Sbjct: 296 PDGSKIAAGSADRFVYVW 313
Score = 187 (70.9 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 41/163 (25%), Positives = 80/163 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V +V F+ ++ +G D IK+WD+ + L T+ GH + V GL++SS+ +Y+ S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 238 DKQVKCWDLE----QNKVIRSYHGHLSG-----VYCLGLHPTIDILLTGGRDSVCRVWDI 288
D V+ WD+ + + +R + G++ + C P + G D VWD
Sbjct: 257 DNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDT 315
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
++ ++ L GH ++ V P +P +++ S D + +++
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 294 IFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGK--TMLTLTHHKKSVRAMA 350
I L+GH+ V C F P + + D I W++ YG TL H +V M
Sbjct: 60 IMLLSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV--ME 115
Query: 351 LHPTED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDN 405
LH D F++++ + + ++ GE + L + +NS G ++ TG D+
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--RE 463
G++ WD + Q Q Q + A++++ T ++++ D IK+W R+
Sbjct: 175 GTVKLWDIRKKAAIQTFQNTYQ---------VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 464 DE-TATPETH 472
++ T T H
Sbjct: 226 NKLTYTMRGH 235
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 235 (87.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/259 (27%), Positives = 116/259 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLAVSSK 228
++SGH G V F + + + DR I +W+V TL GH V L ++
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVWD 287
+ +FSA DK V WD E + ++ GH S V C ++ TG D ++WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 288 IRTKMQIFALAGHDNT--VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
IR K A+ NT V +V T Q+++G D+ IK WDLR K T+ H S
Sbjct: 182 IRKKA---AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNL----PKGE----FLHNMLSQQKTIINSMAVNEE 396
V ++L S + +N ++ +++ PK F N+ + +K ++ +
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 397 GVLATGGDNGSLWFWDWKS 415
+A G + ++ WD S
Sbjct: 299 SKIAAGSADRFVYVWDTTS 317
Score = 224 (83.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 63/205 (30%), Positives = 91/205 (44%)
Query: 171 ISGHLGWVRSV-AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+ + GH V L L LL+ D+ RVWD+R
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS P ++ GS D + WD + + L
Sbjct: 267 PFAPKERCVKIFQGNVHNFEKNLLRCS--WSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 340 THHKKSVRAMALHPTEDCFASASAE 364
H S+ +A HP E SAS++
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSD 349
Score = 207 (77.9 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 43/174 (24%), Positives = 82/174 (47%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
W+ C Y + GH G V + ++ + + S D+T+ +WD G L GH
Sbjct: 94 WNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS 153
Query: 219 QVRGLAVSSKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
V + + + G DD VK WD+ + I+++ V + + T D +++G
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISG 212
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
G D+ +VWD+R + + GH ++V + +++ + D+T++ WD+R
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 206 (77.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 65/258 (25%), Positives = 117/258 (45%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + + SAG D+ + W++ + + GH V + LH
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV--MELHY 118
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S + PQ+V TGS D T+K
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R K + + V A+ + T D S +N IK ++L + + + M
Sbjct: 179 LWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ ++++ EG +L+ DN ++ WD + ++ I Q + E + S+
Sbjct: 238 SV-TGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 295
Query: 444 VTGSRLVTCEADKTIKMW 461
GS++ AD+ + +W
Sbjct: 296 PDGSKIAAGSADRFVYVW 313
Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 40/163 (24%), Positives = 80/163 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V +V F+ ++ +G D IK+WD+ + L T+ GH + V GL++SS+ +Y+ S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 238 DKQVKCWDLE----QNKVIRSYHGHLSG-----VYCLGLHPTIDILLTGGRDSVCRVWDI 288
D V+ WD+ + + ++ + G++ + C P + G D VWD
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDT 315
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
++ ++ L GH ++ V P +P +++ S D + +++
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 294 IFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGK--TMLTLTHHKKSVRAMA 350
I L+GH+ V C F P + + D I W++ YG TL H +V M
Sbjct: 60 IMLLSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV--ME 115
Query: 351 LHPTED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDN 405
LH D F++++ + + ++ GE + L + +NS G ++ TG D+
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--RE 463
G++ WD + Q Q Q + A++++ T ++++ D IK+W R+
Sbjct: 175 GTVKLWDIRKKAAIQTFQNTYQ---------VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 464 DE-TATPETH 472
++ T T H
Sbjct: 226 NKLTYTMRGH 235
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 235 (87.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 72/259 (27%), Positives = 116/259 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLAVSSK 228
++SGH G V F + + + DR I +W+V TL GH V L ++
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVWD 287
+ +FSA DK V WD E + ++ GH S V C ++ TG D ++WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 288 IRTKMQIFALAGHDNT--VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
IR K A+ NT V +V T Q+++G D+ IK WDLR K T+ H S
Sbjct: 182 IRKKA---AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNL----PKGE----FLHNMLSQQKTIINSMAVNEE 396
V ++L S + +N ++ +++ PK F N+ + +K ++ +
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 397 GVLATGGDNGSLWFWDWKS 415
+A G + ++ WD S
Sbjct: 299 SKIAAGSADRFVYVWDTTS 317
Score = 224 (83.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 63/205 (30%), Positives = 91/205 (44%)
Query: 171 ISGHLGWVRSV-AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+ + GH V L L LL+ D+ RVWD+R
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS P ++ GS D + WD + + L
Sbjct: 267 PFAPKERCVKIFQGNVHNFEKNLLRCS--WSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 340 THHKKSVRAMALHPTEDCFASASAE 364
H S+ +A HP E SAS++
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSD 349
Score = 207 (77.9 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 43/174 (24%), Positives = 82/174 (47%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
W+ C Y + GH G V + ++ + + S D+T+ +WD G L GH
Sbjct: 94 WNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS 153
Query: 219 QVRGLAVSSKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
V + + + G DD VK WD+ + I+++ V + + T D +++G
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISG 212
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
G D+ +VWD+R + + GH ++V + +++ + D+T++ WD+R
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 206 (77.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 65/258 (25%), Positives = 117/258 (45%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + + SAG D+ + W++ + + GH V + LH
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV--MELHY 118
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S + PQ+V TGS D T+K
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R K + + V A+ + T D S +N IK ++L + + + M
Sbjct: 179 LWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ ++++ EG +L+ DN ++ WD + ++ I Q + E + S+
Sbjct: 238 SV-TGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 295
Query: 444 VTGSRLVTCEADKTIKMW 461
GS++ AD+ + +W
Sbjct: 296 PDGSKIAAGSADRFVYVW 313
Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 40/163 (24%), Positives = 80/163 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V +V F+ ++ +G D IK+WD+ + L T+ GH + V GL++SS+ +Y+ S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 238 DKQVKCWDLE----QNKVIRSYHGHLSG-----VYCLGLHPTIDILLTGGRDSVCRVWDI 288
D V+ WD+ + + ++ + G++ + C P + G D VWD
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDT 315
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
++ ++ L GH ++ V P +P +++ S D + +++
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 294 IFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGK--TMLTLTHHKKSVRAMA 350
I L+GH+ V C F P + + D I W++ YG TL H +V M
Sbjct: 60 IMLLSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV--ME 115
Query: 351 LHPTED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDN 405
LH D F++++ + + ++ GE + L + +NS G ++ TG D+
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--RE 463
G++ WD + Q Q Q + A++++ T ++++ D IK+W R+
Sbjct: 175 GTVKLWDIRKKAAIQTFQNTYQ---------VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 464 DE-TATPETH 472
++ T T H
Sbjct: 226 NKLTYTMRGH 235
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 179 (68.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 45/160 (28%), Positives = 83/160 (51%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C +V+S H G V V ++ + +GS+D++IK+++V+KG++ + H + L +
Sbjct: 6 CNKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVST 65
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSY---HGHLSGVYCLGLHPTIDILLTGGRDSVC 283
S + +FS + KQ+ WD+ +VIR + H C+ L T+ L +G D +
Sbjct: 66 SDNKQLFSCAE-KQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTL--LFSGSSDRLV 122
Query: 284 RVWDIRTKM--QIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ WD+RTK + L +T+ S+ + Q +T +H
Sbjct: 123 KAWDLRTKSINPVQILDDAKDTITSIIV---NEQTITHNH 159
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/147 (25%), Positives = 74/147 (50%)
Query: 185 HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCW 244
H+ T S D I+ +DV GTL +T I + ++++ ++ D+ VK
Sbjct: 178 HTQKEVITSSVDGCIRTYDVRMGTL-VTYEDTIP-ISSVSITKDKKCFIASCTDETVKLI 235
Query: 245 DLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDN 302
D++ + ++ Y GH + VY + D ++++G D+ ++++ + + L+GH N
Sbjct: 236 DIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISGSEDNDFYIYELLSGKLLSKLSGHSN 295
Query: 303 TVCSVFTRPTDPQVVTGSHDSTIKFWD 329
+ V + P+ Q +T S D TI+ WD
Sbjct: 296 IITHVDSHPSKNQFITSSTDCTIRIWD 322
Score = 100 (40.3 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 35/160 (21%), Positives = 74/160 (46%)
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTED--CF-ASASAENIKK 368
T +V+T S D I+ +D+R G TL ++ ++ ++ T+D CF AS + E +K
Sbjct: 179 TQKEVITSSVDGCIRTYDVRMG----TLVTYEDTIPISSVSITKDKKCFIASCTDETVKL 234
Query: 369 FNLPKGEFLHNMLSQQKTI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
++ E L + + INS + ++ ++ +G ++ + ++ SG +
Sbjct: 235 IDIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISGSEDNDFYIYELLSGKLLSK----- 289
Query: 427 QPGSLDSEAGIYA-LSYDVTGSRLVTCEADKTIKMWREDE 465
L + I + + ++ +T D TI++W + E
Sbjct: 290 ----LSGHSNIITHVDSHPSKNQFITSSTDCTIRIWDQSE 325
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 247 (92.0 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 57/199 (28%), Positives = 85/199 (42%)
Query: 169 RVISGHLGWVRSVAF--DHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
+ + GH G V AF D S C S D T++ WD+ T + GH V + VS
Sbjct: 348 KTLRGHSGPVYRTAFLTDASGLLSC--SEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVS 405
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
Y +A D+ + W + +R Y GHLS V C+ HP + + TG D R+W
Sbjct: 406 PCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLW 465
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSV 346
R + GH V ++ P + + D +K WDL G L H ++
Sbjct: 466 STRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTI 525
Query: 347 RAMALHPTEDCFASASAEN 365
+++ ASAS +N
Sbjct: 526 SSLSFSQDSSLVASASMDN 544
Score = 212 (79.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 56/216 (25%), Positives = 93/216 (43%)
Query: 205 AKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQ--NKVIRSYHGHLSGV 262
A G+ TL GH V A + + + S +D V+ WDL+ N V+ Y GH V
Sbjct: 342 ASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVL--YRGHAYPV 399
Query: 263 YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHD 322
+ + + P T D R+W + AGH + V V P + TGS D
Sbjct: 400 WDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTD 459
Query: 323 STIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNML 381
T++ W R G ++ T H+ V +A P ASA + +K ++L G ++
Sbjct: 460 KTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLR 519
Query: 382 SQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGH 417
TI + + ++A+ + ++ WD ++ H
Sbjct: 520 GHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAH 555
Score = 205 (77.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 40/121 (33%), Positives = 62/121 (51%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V V F ++ + TGS D+T+++W +G TGH V LA S
Sbjct: 432 RLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPN 491
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ SAG+D+++K WDL + + GH + L ++ + D+ RVWDI
Sbjct: 492 GKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
Query: 289 R 289
R
Sbjct: 552 R 552
Score = 201 (75.8 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 47/160 (29%), Positives = 72/160 (45%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGHIEQVRGLAVSSKHTY 231
GH V V + +F T S DRT ++W A+ T L L GH+ V + Y
Sbjct: 394 GHAYPVWDVDVSPCSLYFSTASHDRTARLWSFAR-TYPLRLYAGHLSDVDCVKFHPNSNY 452
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + DK V+ W Q +R + GH V L P L + G D ++WD+ +
Sbjct: 453 IATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASG 512
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L GH +T+ S+ V + S D+T++ WD+R
Sbjct: 513 GLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIR 552
Score = 170 (64.9 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 50/212 (23%), Positives = 87/212 (41%)
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
I++ GH VY LL+ DS R WD+++ GH V V P
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSP 406
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFN 370
T SHD T + W + H V + HP + A+ S + ++ ++
Sbjct: 407 CSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWS 466
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPG 429
+G + + ++ ++A + G LA+ G++ L WD SG F+ + G
Sbjct: 467 TRQGASVRLFTGHRGPVL-TLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLR-----G 520
Query: 430 SLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
D+ I +LS+ S + + D T+++W
Sbjct: 521 HTDT---ISSLSFSQDSSLVASASMDNTVRVW 549
Score = 37 (18.1 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 25 KRALDLFSPTHGRLPPPDPESKKI 48
K ALD F L DPE K I
Sbjct: 112 KGALDSFYSRFHSLFQQDPEQKAI 135
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 237 (88.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 71/234 (30%), Positives = 108/234 (46%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS-SKHTYMFSAGDDKQVKCWDLEQN- 249
TG D IKIW+V G L L L+GH + VR L+ + S + SA DK ++ WDL ++
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHG 189
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K I+ GHL VYC + P +L + + +W +R+ I L GH ++V S
Sbjct: 190 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 249
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA---LHPTEDCFASASAENI 366
P +VT S+D+ + WD G+ + +L HH + M +H + S E +
Sbjct: 250 SPDSALLVTASYDTNVIMWDPYTGERLRSL-HHTQLNPPMDDSDVHISSLRSVCFSPEGL 308
Query: 367 KKFNLPKGEFLHNMLSQQKTII------NSMAVN---EEGVLATGGDNGSLWFW 411
+ L + KT I N + GV+ATG +G + FW
Sbjct: 309 YLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFFPHGGVIATGTRDGHVQFW 362
Score = 180 (68.4 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 65/304 (21%), Positives = 127/304 (41%)
Query: 180 SVAFDHSNTWFCTGSADRTIKI--WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
SVAF +WF +K+ W + + + G + R S T +
Sbjct: 33 SVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIP---KGFEAKSRS---SKNETKGRGSPK 86
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-----ILLTGGRDSVCRVWDIRTKM 292
+K + C + + S HP + IL TG D ++W+++T +
Sbjct: 87 EKTLDCGQIVWGLAFSPWPSPPSKKLWARHHPQVPDVSCLILATGLNDGQIKIWEVQTGL 146
Query: 293 QIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDL-RYGKTMLTLTHHKKSVRAMA 350
+ L+GH + V + P+ + V+ S D T++ WDL ++GK + L+ H + V +
Sbjct: 147 LLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCS 206
Query: 351 LHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLW 409
+ P SA+ E ++ +++ + + Q ++++ + +L T + ++
Sbjct: 207 ISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVI 266
Query: 410 FWDWKSGHNFQQAQ-TIVQPGSLDSEAGIYALS---YDVTGSRLVTCEADKTIKMWREDE 465
WD +G + T + P DS+ I +L + G L T D+ +++W E
Sbjct: 267 MWDPYTGERLRSLHHTQLNPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWAL-E 325
Query: 466 TATP 469
TP
Sbjct: 326 LKTP 329
Score = 161 (61.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 54/217 (24%), Positives = 91/217 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K +V+SGHL WV + + C+ + ++++ +W + TL L GH V
Sbjct: 190 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 249
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG------------HLSGVYCLGLHPTIDI 273
S + +A D V WD + +RS H H+S + + P
Sbjct: 250 SPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSDVHISSLRSVCFSPEGLY 309
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L T D + R+W + K I A A N +C F P + TG+ D ++FW
Sbjct: 310 LATVADDRLLRIWALELKTPI-AFAPMTNGLCCTFF-PHGGVIATGTRDGHVQFWTAP-- 365
Query: 334 KTMLTLTHH-KKSVRAMALHPTEDCFASASAENIKKF 369
+ + +L H +K++R+ T A + +K+F
Sbjct: 366 RVLSSLKHLCRKALRSFLT--TYQVLALPIPKKMKEF 400
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 234 (87.4 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 72/259 (27%), Positives = 116/259 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLAVSSK 228
++SGH G V F + + + DR I +W+V TL GH V L ++
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVWD 287
+ +FSA DK V WD E + ++ GH S V C ++ TG D ++WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 288 IRTKMQIFALAGHDNT--VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
IR K A+ NT V +V T Q+++G D+ IK WDLR K T+ H S
Sbjct: 182 IRKKA---AVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNL----PKGE----FLHNMLSQQKTIINSMAVNEE 396
V ++L S + +N ++ +++ PK F N+ + +K ++ +
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 397 GVLATGGDNGSLWFWDWKS 415
+A G + ++ WD S
Sbjct: 299 SKIAAGSADRFVYVWDTTS 317
Score = 226 (84.6 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 63/205 (30%), Positives = 91/205 (44%)
Query: 171 ISGHLGWVRSV-AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTS 206
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+ + GH V L L LL+ D+ RVWD+R
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS P ++ GS D + WD + + L
Sbjct: 267 PFAPKERCVKIFQGNVHNFEKNLLRCS--WSPDGSKIAAGSADRFVYVWDTTSRRVLYKL 324
Query: 340 THHKKSVRAMALHPTEDCFASASAE 364
H S+ +A HP E SAS++
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSD 349
Score = 206 (77.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 42/174 (24%), Positives = 82/174 (47%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
W+ C Y + GH G V + ++ + + S D+T+ +WD G L GH
Sbjct: 94 WNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS 153
Query: 219 QVRGLAVSSKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
V + + + G DD VK WD+ + ++++ V + + T D +++G
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISG 212
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
G D+ +VWD+R + + GH ++V + +++ + D+T++ WD+R
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 205 (77.2 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 65/258 (25%), Positives = 117/258 (45%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + + SAG D+ + W++ + + GH V + LH
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV--MELHY 118
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S + PQ+V TGS D T+K
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R + T + V A+ + T D S +N IK ++L + + + M
Sbjct: 179 LWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ ++++ EG +L+ DN ++ WD + ++ I Q + E + S+
Sbjct: 238 SV-TGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 295
Query: 444 VTGSRLVTCEADKTIKMW 461
GS++ AD+ + +W
Sbjct: 296 PDGSKIAAGSADRFVYVW 313
Score = 185 (70.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 40/163 (24%), Positives = 80/163 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V +V F+ ++ +G D IK+WD+ + L T+ GH + V GL++SS+ +Y+ S
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 238 DKQVKCWDLE----QNKVIRSYHGHLSG-----VYCLGLHPTIDILLTGGRDSVCRVWDI 288
D V+ WD+ + + ++ + G++ + C P + G D VWD
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDT 315
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
++ ++ L GH ++ V P +P +++ S D + +++
Sbjct: 316 TSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 294 IFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGK--TMLTLTHHKKSVRAMA 350
I L+GH+ V C F P + + D I W++ YG TL H +V M
Sbjct: 60 IMLLSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV--ME 115
Query: 351 LHPTED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDN 405
LH D F++++ + + ++ GE + L + +NS G ++ TG D+
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--RE 463
G++ WD + Q Q Q + A++++ T ++++ D IK+W R+
Sbjct: 175 GTVKLWDIRKKAAVQTFQNTYQ---------VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 464 DE-TATPETH 472
++ T T H
Sbjct: 226 NKLTYTMRGH 235
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 232 (86.7 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 57/187 (30%), Positives = 92/187 (49%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLK--LTLTGHIEQVRGLAVSS 227
++SGH V ++ F+ + T +GS DR I +W V G K + L GH + L +S
Sbjct: 48 LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV-HGDCKNFMVLKGHKNAILDLHWTS 106
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVW 286
+ + SA DK V+ WD+E K I+ H S V C ++++G D ++W
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW 166
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSV 346
D+R + I F+ D ++ TG D+ +K WDLR G+ +TL H+ ++
Sbjct: 167 DMRQRGAIQTFPDKYQITAVSFSDAAD-KIFTGGVDNDVKVWDLRKGEATMTLEGHQDTI 225
Query: 347 RAMALHP 353
M+L P
Sbjct: 226 TGMSLSP 232
Score = 220 (82.5 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 65/257 (25%), Positives = 115/257 (44%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH V + + T + S D+++ W + + K GH + + L LH
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAI--LDLHW 104
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVF-TRPTDPQVVTGSHDSTIK 326
T D +++ D R WD+ T QI +A H + V S TR P +++GS D T K
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R + T K + A++ D + +N +K ++L KGE + Q
Sbjct: 165 LWDMRQRGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQD 223
Query: 386 TIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDV 444
TI M+++ +G L T G + L WD + + I + + E + S+
Sbjct: 224 TI-TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 282
Query: 445 TGSRLVTCEADKTIKMW 461
G+++ +D+ + +W
Sbjct: 283 DGTKVTAGSSDRMVHIW 299
Score = 202 (76.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 65/233 (27%), Positives = 98/233 (42%)
Query: 146 SAIMERIPSKWPRPEWHAPW-KCYRVISGHLGWVRSVAFDHSNT-WFCTGSADRTIKIWD 203
S I+ P K R W K + ++ H +V S +GS D T K+WD
Sbjct: 109 SQIVSASPDKTVRA-WDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 204 VA-KGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGV 262
+ +G ++ T Q+ ++ S +F+ G D VK WDL + + + GH +
Sbjct: 168 MRQRGAIQ-TFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTI 225
Query: 263 YCLGLHPTIDILLTGGRDSVCRVWDIRTK------MQIFALAGH--DNTVCSVFTRPTDP 314
+ L P LLT G D+ VWD+R ++IF H + + P
Sbjct: 226 TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT 285
Query: 315 QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NI 366
+V GS D + WD +T+ L H SV HPTE S S++ NI
Sbjct: 286 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Score = 188 (71.2 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 41/171 (23%), Positives = 74/171 (43%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVR 221
H K + V+ GH + + + + + S D+T++ WDV G + H V
Sbjct: 83 HGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN 142
Query: 222 GLAVSSKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
+ + + +G DD K WD+ Q I+++ + + D + TGG D
Sbjct: 143 SCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVD 201
Query: 281 SVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
+ +VWD+R L GH +T+ + P ++T D+ + WD+R
Sbjct: 202 NDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMR 252
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 48/189 (25%), Positives = 87/189 (46%)
Query: 294 IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG--KTMLTLTHHKKSVRAMAL 351
I L+GH + V ++ P + +GSHD I W + +G K + L HK ++ + L
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV-HGDCKNFMVLKGHKNAI--LDL 102
Query: 352 HPTEDC--FASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDNG 406
H T D SAS + ++ +++ G+ + M ++ + +NS G ++ +G D+G
Sbjct: 103 HWTSDGSQIVSASPDKTVRAWDVETGKQIKKM-AEHSSFVNSCCPTRRGPPLIISGSDDG 161
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--RED 464
+ WD + Q + + I A+S+ ++ T D +K+W R+
Sbjct: 162 TAKLWDMRQRGAIQ---------TFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKG 212
Query: 465 E-TATPETH 472
E T T E H
Sbjct: 213 EATMTLEGH 221
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 243 (90.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 59/248 (23%), Positives = 123/248 (49%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VR++ + H+++W TG +K W +K+ H E +RG++ S
Sbjct: 183 ILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVKM-YQAHKEAIRGISFSPTD 241
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+ S DD ++ WD + + R GH + V C+ HP ++++G +D+ ++WD
Sbjct: 242 SKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWD 301
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR-YGKTMLTLTHHKKSV 346
++ + + L H +TV + +VT S D +K +D+R + + HKK
Sbjct: 302 PKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEA 361
Query: 347 RAMALHPT-EDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
+++ HP E F S ++ +I +N+ + + + + +I+ ++A + G +L +G
Sbjct: 362 SSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGS 421
Query: 404 DNGSLWFW 411
++ ++ FW
Sbjct: 422 NDHTIKFW 429
Score = 223 (83.6 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 68/275 (24%), Positives = 117/275 (42%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG++ +W+ + L H VR + S ++M + VK W N V
Sbjct: 163 TGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNV 222
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ Y H + + PT ++G D R+WD + L GH V V P
Sbjct: 223 -KMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHP 281
Query: 312 TDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK- 368
+V+GS D+ IK WD + G + TL HK +V + + + +AS +++ K
Sbjct: 282 QKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKL 341
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVN--EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
F++ + K +S++ + EG+ +GG +GS+ FW+ + +T
Sbjct: 342 FDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVET-- 399
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ DS ++ L++ G L + D TIK W
Sbjct: 400 ---AHDSI--VWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 206 (77.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 62/244 (25%), Positives = 111/244 (45%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + ++ H +R ++F +++ F +GS D T++IWD + + L GH V
Sbjct: 215 WQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADV 274
Query: 221 RGLAVSSKHTYMFSAGDDKQ--VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ + + + S D Q +K WD + + + H H S V L + + L+T
Sbjct: 275 KCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTAS 334
Query: 279 RDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIKFWDLRYGKTM 336
RD + +++DIR + ++ GH SV P + +G D +I FW++ K +
Sbjct: 335 RDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEI 394
Query: 337 LTL-THHKKSVRAMALHPTEDCFASASAENIKKF---NLPKGEFLHNMLSQQKTIINSMA 392
+ T H V +A HP S S ++ KF N P G+ + + + T+ S+A
Sbjct: 395 GCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFWTRNRP-GDLMRDKYNLN-TLPASLA 452
Query: 393 VNEE 396
+E
Sbjct: 453 ALDE 456
Score = 39 (18.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 379 NMLSQQKTIINSMAVNEEGVLATGGDNG 406
N L+ Q+ N+M EG+LA+G NG
Sbjct: 548 NGLNHQQISENTM----EGILASGMLNG 571
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 239 (89.2 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 75/262 (28%), Positives = 126/262 (48%)
Query: 166 KCYRVISGHLGWVRSVAFDH-SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLA 224
+C I+GH + + +F S++ +GS D T +IWD GT TL GH V LA
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWV--LA 196
Query: 225 VS-SKHTYMFSAGD-DKQVKCWDLEQNKVIRS-YHGHLSGVYCLGLHPTI------DILL 275
VS S + M + G D V+ WD ++ + + + GH+ + L P L
Sbjct: 197 VSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLA 256
Query: 276 TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKT 335
+ +DS R+WD+ +K L+GH +V V T ++ T SHD TIK W+ + G
Sbjct: 257 SASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTG-KIYTSSHDRTIKVWNSQTGTL 315
Query: 336 MLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNE 395
+ TL+ H V +AL T+ +A ++ K +P+ + + +K + +N
Sbjct: 316 IQTLSAHAHRVNHLALS-TDFILRTAYHDHTGK--VPESD-ADKVAMAKKRFEKAATINN 371
Query: 396 EGV--LATGGDNGSLWFWDWKS 415
+ V L + D+ +++ WD +S
Sbjct: 372 KIVEKLVSASDDFTMYLWDPES 393
Score = 208 (78.3 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 76/311 (24%), Positives = 126/311 (40%)
Query: 165 WKC-----YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKG-TLKLTLTGHIE 218
W C + GH WV +V++ + TGS D T++IWD KG L L GH++
Sbjct: 176 WDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVK 235
Query: 219 QVRGLA------VSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID 272
+ LA S H + SA D V+ WD+ + GH V C+ T
Sbjct: 236 WITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK 295
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
I T D +VW+ +T I L+ H + V + TD + T HD T K +
Sbjct: 296 IY-TSSHDRTIKVWNSQTGTLIQTLSAHAHRV-NHLALSTDFILRTAYHDHTGKVPESDA 353
Query: 333 GKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEF--LHNMLSQQKTIINS 390
K + +K+ A + + SAS + P+ + +L QK + +
Sbjct: 354 DKVAMAKKRFEKA--ATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHV 411
Query: 391 MAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLV 450
+ +A+ G + + W+ + G T ++ G + + +Y + LV
Sbjct: 412 TFSPDMAYIASAGFDNHVKLWNGRDGKFI----TTLR-GHVGA---VYQCCFSADSRLLV 463
Query: 451 TCEADKTIKMW 461
+ D T+K+W
Sbjct: 464 SSSKDTTLKVW 474
Score = 192 (72.6 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 67/300 (22%), Positives = 131/300 (43%)
Query: 171 ISGHLGWVRSVAFD--H----SNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLA 224
+ GH+ W+ S+A++ H + + S D T++IWDV + L+GH V +
Sbjct: 230 LKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVR 289
Query: 225 VSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
++++ D+ +K W+ + +I++ H V L L T IL T D +
Sbjct: 290 WGGTGK-IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALS-TDFILRTAYHDHTGK 347
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG-KTMLTLTHHK 343
V + + A+A + ++V+ S D T+ WD K + L H+
Sbjct: 348 VPE--SDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQ 405
Query: 344 KSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATG 402
K V + P ASA +N +K +N G+F+ + + + +L +
Sbjct: 406 KEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSS 465
Query: 403 GDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
+ +L W+ ++G + ++ + PG D ++A+ + G ++ + DK I++WR
Sbjct: 466 SKDTTLKVWNVRTG---KLSEDL--PGHKDE---VFAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 52/225 (23%), Positives = 94/225 (41%)
Query: 254 SYHGHLSGVYCLGLHP-TIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPT 312
S GH + P + +++G DS R+WD T + L GH + V +V P
Sbjct: 143 SIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPN 202
Query: 313 DPQVVTGSHDSTIKFWDLRYGKTM-LTLTHHKKSVRAMALHPTE------DCFASASAEN 365
+ TGS D+T++ WD + G+ + L H K + ++A P ASAS ++
Sbjct: 203 GAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDS 262
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
+ + +LS K + + G + T + ++ W+ ++G Q
Sbjct: 263 TVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQTLSAH 322
Query: 426 ---VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETA 467
V +L ++ + +D TG ++ +ADK + E A
Sbjct: 323 AHRVNHLALSTDFILRTAYHDHTG-KVPESDADKVAMAKKRFEKA 366
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 242 (90.2 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 52/197 (26%), Positives = 87/197 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V V+F + + S D TI++W + T + GH V S
Sbjct: 493 KILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF 552
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S G D+ + W + + +R + GHL+ V C HP + + TG D R+WD+
Sbjct: 553 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDV 612
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH + S+ P + +GS D + WD+ +G + L H ++ A
Sbjct: 613 LNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYA 672
Query: 349 MALHPTEDCFASASAEN 365
+ + AS S +N
Sbjct: 673 LKFSRDGEIIASGSIDN 689
Score = 222 (83.2 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 60/224 (26%), Positives = 103/224 (45%)
Query: 194 SADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIR 253
S D +I D + L GH V G++ S Y+ S+ +D ++ W L+ +
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 254 SYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW--DIRTKMQIFALAGH-DNTVCSVFTR 310
Y GH V+ P ++GG D V R+W D ++IFA GH + C+ F
Sbjct: 536 GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFA--GHLADVTCTRF-H 592
Query: 311 PTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKF 369
P V TGS D T++ WD+ G + T HK + ++A P AS S + + +
Sbjct: 593 PNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLW 652
Query: 370 NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWD 412
++ G + + TI ++ + +G ++A+G + ++ WD
Sbjct: 653 DIGHGLMIAELKGHTGTIY-ALKFSRDGEIIASGSIDNTVRLWD 695
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V F ++ + TGS+DRT+++WDV G TGH + LA S
Sbjct: 577 RIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN 636
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
++ S D +V WD+ +I GH +Y L +I+ +G D+ R+WD+
Sbjct: 637 GKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 54/227 (23%), Positives = 97/227 (42%)
Query: 237 DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFA 296
DD + D + + + HGH VY + P + LL+ D R+W ++T +
Sbjct: 477 DDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVG 536
Query: 297 LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTED 356
GH+ V P V+G HD + W + + + H V HP +
Sbjct: 537 YKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 596
Query: 357 CFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWK 414
A+ S++ ++ +++ G + + + K I+S+A + G LA+G +G + WD
Sbjct: 597 YVATGSSDRTVRLWDVLNGNCVR-IFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWD-- 653
Query: 415 SGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
GH A+ G+ IYAL + G + + D T+++W
Sbjct: 654 IGHGLMIAELKGHTGT------IYALKFSRDGEIIASGSIDNTVRLW 694
Score = 197 (74.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 61/271 (22%), Positives = 114/271 (42%)
Query: 164 PWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
P C Y ++ + G + +V F ++ G AD T+++W V L+ ++
Sbjct: 415 PSICFYTFLNAYQG-LTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLR-----KVKSAAD 468
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
L + K + DD + D + + + HGH VY + P + LL+ D
Sbjct: 469 LNLIDKES------DDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGT 522
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+W ++T + GH+ V P V+G HD + W + + + H
Sbjct: 523 IRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGH 582
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V HP + A+ S++ ++ +++ G + + + K I+S+A + G LA
Sbjct: 583 LADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVR-IFTGHKGPIHSLAFSPNGKFLA 641
Query: 401 TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSL 431
+G +G + WD GH A+ G++
Sbjct: 642 SGSTDGRVLLWD--IGHGLMIAELKGHTGTI 670
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C R+ +GH G + S+AF + + +GS D + +WD+ G + L GH + L S
Sbjct: 617 CVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFS 676
Query: 227 SKHTYMFSAGDDKQVKCWDL 246
+ S D V+ WD+
Sbjct: 677 RDGEIIASGSIDNTVRLWDV 696
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 238 (88.8 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 56/248 (22%), Positives = 109/248 (43%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+ +R + GH + SV F + S DRTI++W K H VR +
Sbjct: 52 RAFRYV-GHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDF 110
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
S+ ++ SA +DK +K W++ + + + S + H V C P ++++ D ++
Sbjct: 111 SADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD K + + V P + + D T+K WD+R K + H
Sbjct: 171 WDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG 230
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT-GG 403
V ++ HP+ + +AS++ +K +L +G ++ + + +++ ++ G L T GG
Sbjct: 231 VNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGGELFTSGG 289
Query: 404 DNGSLWFW 411
+ + W
Sbjct: 290 ADAQVLLW 297
Score = 199 (75.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 66/314 (21%), Positives = 124/314 (39%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + SV F + TGS D + +W + GH + + + S
Sbjct: 12 RYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPL 71
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA D+ ++ W ++ + H + V + L + D +VW++
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ +++L H + V C+ F+ P +V+ S D TIK WD + + +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFAN 190
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDN 405
+A +P C ASA +++ +K +++ + L + + N ++ + G L T +
Sbjct: 191 FVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGV-NCVSFHPSGNYLITASSD 249
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRE-- 463
G+L D G Q P ++ +S+ G + AD + +WR
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGP--------VFTVSFSKGGELFTSGGADAQVLLWRTNF 301
Query: 464 DETATPETHPLNFK 477
DE + N K
Sbjct: 302 DELNYKDVSKRNLK 315
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 238 (88.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 79/308 (25%), Positives = 142/308 (46%)
Query: 169 RVISGHLGWVRSVAFD--HSNT---WFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
R ++GH W+ +++++ H+N + + S D ++++WD G + TLTGH + V L
Sbjct: 194 RALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCL 253
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG---RD 280
++SA D+ +K W + R+ GH V + L T L TG +
Sbjct: 254 RWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAE 311
Query: 281 SVCRVWDIRTKMQIF---ALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTM 336
+ D+R +Q AL+ + N V R P+ +V+GS D T+ W K
Sbjct: 312 ASVNAQDLRGSLQELKERALSRY-NLV-----RGQGPERLVSGSDDFTLFLWSPAEDKKP 365
Query: 337 LT-LTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVN 394
L +T H+ + + P ASAS + +IK ++ G++L ++ +
Sbjct: 366 LARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 425
Query: 395 EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEA 454
+ +L +G + +L WD K+ Q+ T + PG D +YA+ + G R+ +
Sbjct: 426 DSRLLVSGSSDSTLKVWDVKA----QKLSTDL-PGHADE---VYAVDWSPDGQRVASGGK 477
Query: 455 DKTIKMWR 462
DK +++WR
Sbjct: 478 DKCLRIWR 485
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 74/306 (24%), Positives = 123/306 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GH V SVAF + + +GS D T++ WD++ T T GH V ++
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 165
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVI-RSYHGHLSGVYCLG---LH--PTIDILLTGGR 279
S + S + Q+ WD K + R+ GH + L LH P + + +
Sbjct: 166 SPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSK 225
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D RVWD L GH +V + D + + S D TIK W G TL
Sbjct: 226 DGSVRVWDTTAGRCERTLTGHAQSV-TCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTL 284
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQ--QKTIINSMAVNEEG 397
H V MAL T+ + + E + + L L + ++ + V +G
Sbjct: 285 QGHGHWVNTMALS-TDYALRTGAFEPAEAS--VNAQDLRGSLQELKERALSRYNLVRGQG 341
Query: 398 V--LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
L +G D+ +L+ W + + + + +A I + + + + D
Sbjct: 342 PERLVSGSDDFTLFLWS-----PAEDKKPLAR--MTGHQALINQVVFSPDSRVIASASFD 394
Query: 456 KTIKMW 461
K+IK+W
Sbjct: 395 KSIKLW 400
Score = 177 (67.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 69/265 (26%), Positives = 109/265 (41%)
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
+L GH E V +A S Y+ S D V+ WDL + GH V + P
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 169
Query: 272 DILLTGGRDSVCRVWDIRTKMQIF-ALAGHDNTVCSVFTRP--TDPQ---VVTGSHDSTI 325
L +G ++ +WD T Q+ AL GH + ++ P +P+ V + S D ++
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSV 229
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQK 385
+ WD G+ TLT H +SV + ++++ IK + G L L
Sbjct: 230 RVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG-VLCRTLQGHG 288
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSYDV 444
+N+MA++ + L TG F ++ N Q + +Q L A Y L
Sbjct: 289 HWVNTMALSTDYALRTGA------FEPAEASVNAQDLRGSLQ--ELKERALSRYNLVRGQ 340
Query: 445 TGSRLVTCEADKTIKMWREDETATP 469
RLV+ D T+ +W E P
Sbjct: 341 GPERLVSGSDDFTLFLWSPAEDKKP 365
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 57/226 (25%), Positives = 91/226 (40%)
Query: 146 SAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGS---ADRTIKIW 202
SA +R W H C R + GH WV ++A ++ TG+ A+ ++
Sbjct: 263 SASQDRTIKVWRA---HDGVLC-RTLQGHGHWVNTMALS-TDYALRTGAFEPAEASVNAQ 317
Query: 203 DVAKGTL---KLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWD-LEQNKVIRSYHGH 258
D+ +G+L K VRG + S DD + W E K + GH
Sbjct: 318 DL-RGSLQELKERALSRYNLVRGQGPER----LVSGSDDFTLFLWSPAEDKKPLARMTGH 372
Query: 259 LSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVT 318
+ + + P ++ + D ++WD RT + +L GH V + +V+
Sbjct: 373 QALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVS 432
Query: 319 GSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
GS DST+K WD++ K L H V A+ P AS +
Sbjct: 433 GSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKD 478
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 235 (87.8 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 69/237 (29%), Positives = 112/237 (47%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF-SAGDDKQVKCWDLEQN- 249
TG D IKIW+V G L L L+GH + VR L+ + + + SA DK ++ WDL ++
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHG 187
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
K I+ GHL VYC + P +L + + +W +R+ I L GH ++V S
Sbjct: 188 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 247
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH------------HKKSVRAMALHPTEDC 357
P +VT S+D+++ WD G+ + +L H H S+R++ P E
Sbjct: 248 SPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSP-EGL 306
Query: 358 FASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVN---EEGVLATGGDNGSLWFW 411
+ + A++ + + E + T N + GV+ATG +G + FW
Sbjct: 307 YLATVADD-RLLRIWALELKAPVAFAPMT--NGLCCTFFPHGGVIATGTRDGHVQFW 360
Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 62/292 (21%), Positives = 123/292 (42%)
Query: 188 TWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV--RGLAVSSKHTYMFSAG----DDKQV 241
TW S D + W +KL EQ +G S+ + S G +K +
Sbjct: 29 TWSVAFSPDGSWFAWSQGHCVVKLVPWPLEEQFIPKGFEAKSRSSKNDSKGRGSLKEKTL 88
Query: 242 KCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-----ILLTGGRDSVCRVWDIRTKMQIFA 296
C + + S L HP + IL TG D ++W+++T + +
Sbjct: 89 DCGQIVWGLAFSPWPSPPSRKLWLRHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLN 148
Query: 297 LAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDL-RYGKTMLTLTHHKKSVRAMALHPT 354
L+GH + V + P + V+ S D T++ WDL ++GK + L+ H + V ++ P
Sbjct: 149 LSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 208
Query: 355 EDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDW 413
SA+ E ++ +++ + + Q ++++ + +L T + S+ WD
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDP 268
Query: 414 KSGHNFQQAQ-TIVQPGSLDSE---AGIYALSYDVTGSRLVTCEADKTIKMW 461
+G + T ++ DS+ + + ++ + G L T D+ +++W
Sbjct: 269 YTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIW 320
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/195 (25%), Positives = 83/195 (42%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
K +V+SGHL WV + + C+ + ++++ +W + TL L GH V
Sbjct: 188 KQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDF 247
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG------------HLSGVYCLGLHPTIDI 273
S + +A D V WD + +RS H H+S + + P
Sbjct: 248 SPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSPEGLY 307
Query: 274 LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG 333
L T D + R+W + K + A A N +C F P + TG+ D ++FW
Sbjct: 308 LATVADDRLLRIWALELKAPV-AFAPMTNGLCCTFF-PHGGVIATGTRDGHVQFWTAP-- 363
Query: 334 KTMLTLTHH-KKSVR 347
+ + +L H +K++R
Sbjct: 364 RVLSSLKHLCRKALR 378
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 235 (87.8 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 72/259 (27%), Positives = 116/259 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLAVSSK 228
++SGH G V F + + + DR I +W+V TL GH V L ++
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 120
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVWD 287
+ +FSA DK V WD E + ++ GH S V C ++ TG D ++WD
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 288 IRTKMQIFALAGHDNT--VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
IR K A+ NT V +V T Q+++G D+ IK WDLR K T+ H S
Sbjct: 181 IRKKA---AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 237
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNL----PKGE----FLHNMLSQQKTIINSMAVNEE 396
V ++L S + +N ++ +++ PK F N+ + +K ++ +
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 297
Query: 397 GVLATGGDNGSLWFWDWKS 415
+A G + ++ WD S
Sbjct: 298 SKIAAGSADRFVYVWDTTS 316
Score = 212 (79.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 60/196 (30%), Positives = 86/196 (43%)
Query: 171 ISGHLGWVRSV-AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 205
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+ + GH V L L LL+ D+ RVWD+R
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS P ++ GS D + WD + + L
Sbjct: 266 PFAPKERCVKIFQGNVHNFEKNLLRCS--WSPDGSKIAAGSADRFVYVWDTTSRRILYKL 323
Query: 340 THHKKSVRAMALHPTE 355
H S+ +A HP E
Sbjct: 324 PGHAGSINEVAFHPDE 339
Score = 206 (77.6 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 65/258 (25%), Positives = 117/258 (45%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + + SAG D+ + W++ + + GH V + LH
Sbjct: 60 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV--MELHY 117
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S + PQ+V TGS D T+K
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R K + + V A+ + T D S +N IK ++L + + + M
Sbjct: 178 LWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 236
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ ++++ EG +L+ DN ++ WD + ++ I Q + E + S+
Sbjct: 237 SV-TGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 294
Query: 444 VTGSRLVTCEADKTIKMW 461
GS++ AD+ + +W
Sbjct: 295 PDGSKIAAGSADRFVYVW 312
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 41/153 (26%), Positives = 75/153 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V +V F+ ++ +G D IK+WD+ + L T+ GH + V GL++SS+ +Y+ S
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 255
Query: 238 DKQVKCWDLE----QNKVIRSYHGHLSG-----VYCLGLHPTIDILLTGGRDSVCRVWDI 288
D V+ WD+ + + ++ + G++ + C P + G D VWD
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAAGSADRFVYVWDT 314
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
++ ++ L GH ++ V P +P + TG H
Sbjct: 315 TSRRILYKLPGHAGSINEVAFHPDEPIIETGFH 347
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 294 IFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGK--TMLTLTHHKKSVRAMA 350
I L+GH+ V C F P + + D I W++ YG TL H +V M
Sbjct: 59 IMLLSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV--ME 114
Query: 351 LHPTED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDN 405
LH D F++++ + + ++ GE + L + +NS G ++ TG D+
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDD 173
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--RE 463
G++ WD + Q Q Q + A++++ T ++++ D IK+W R+
Sbjct: 174 GTVKLWDIRKKAAIQTFQNTYQ---------VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 464 DE-TATPETH 472
++ T T H
Sbjct: 225 NKLTYTMRGH 234
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 236 (88.1 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 58/252 (23%), Positives = 112/252 (44%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVR 221
HA + YR + GH V SV F + S DRT+++W K H VR
Sbjct: 8 HA--RAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVR 64
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDS 281
+ S+ ++ +A +DK +K W + + + + S + H V C P ++++ D
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 124
Query: 282 VCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
++WD K + + V P+ + + D T+K WD+R K +
Sbjct: 125 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 184
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL- 399
H V ++ HP+ + +AS++ +K +L +G ++ + + +++ ++ G L
Sbjct: 185 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGGELF 243
Query: 400 ATGGDNGSLWFW 411
A+GG + + W
Sbjct: 244 ASGGADTQVLLW 255
Score = 220 (82.5 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 56/223 (25%), Positives = 95/223 (42%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
NL SA +R W P+ + ++ H VRSV F + T S D++IK+
Sbjct: 31 NLLASASRDRTVRLWI-PDKRGKFSEFKA---HTAPVRSVDFSADGQFLATASEDKSIKV 86
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
W + + +L H VR S + S +DK +K WD + + ++ +
Sbjct: 87 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 146
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ +P+ + + G D +VWD+R + H V + P+ ++T S
Sbjct: 147 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASS 206
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
D T+K DL G+ + TL H V ++ + FAS A+
Sbjct: 207 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 249
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 55/265 (20%), Positives = 104/265 (39%)
Query: 201 IWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLS 260
+W+ GH + V + S + SA D+ V+ W ++ + H +
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 261 GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTG 319
V + L T D +VW + + +++L H + V C+ F+ P +V+
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSC 120
Query: 320 SHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASA-SAENIKKFNLPKGEFLH 378
S D TIK WD + + + + +P+ C ASA S + +K +++ + L
Sbjct: 121 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 180
Query: 379 NMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGI 437
+ + N ++ + G L T +G+L D G Q P +
Sbjct: 181 HYQVHSGGV-NCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGP--------V 231
Query: 438 YALSYDVTGSRLVTCEADKTIKMWR 462
+ +S+ G + AD + +WR
Sbjct: 232 FTVSFSKGGELFASGGADTQVLLWR 256
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 232 (86.7 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 79/288 (27%), Positives = 125/288 (43%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL-TLTGHIEQVRGLAVSSK 228
++SGH G V F + + + DR I +W V TL GH V L ++
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVY-CLGLHPTIDILLTGGRDSVCRVWD 287
+ +FSA DK V WD E + ++ GH S V C ++ TG D ++WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 288 IRTKMQIFALAGHDNT--VCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
IR K A+ NT V +V T Q+++G D+ IK WDLR K T+ H S
Sbjct: 182 IRKKA---AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNL----PKGE----FLHNMLSQQKTIINSMAVNEE 396
V ++L S + +N ++ +++ PK F N+ + +K ++ +
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQA---QTIVQPGSLDSEAGIYALS 441
+A G + L+ W S + Q + Q S+ + GI LS
Sbjct: 299 SKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQEGIXILS 346
Score = 205 (77.2 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
W C Y + GH G V + ++ + + S D+T+ +WD G L GH
Sbjct: 94 WSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS 153
Query: 219 QVRGLAVSSKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
V + + + G DD VK WD+ + I+++ V + + T D +++G
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISG 212
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
G D+ +VWD+R + + GH ++V + +++ + D+T++ WD+R
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 199 (75.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 65/258 (25%), Positives = 114/258 (44%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + + SAG D+ + W + + + GH V + LH
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAV--MELHY 118
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S + PQ+V TGS D T+K
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R K + + V A+ + T D S +N IK ++L + + + M
Sbjct: 179 LWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ ++++ EG +L+ DN ++ WD + ++ I Q + E + S+
Sbjct: 238 SV-TGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 295
Query: 444 VTGSRLVTCEADKTIKMW 461
GS++ AD + W
Sbjct: 296 PDGSKIAAGSADSFLYPW 313
Score = 188 (71.2 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 60/206 (29%), Positives = 92/206 (44%)
Query: 171 ISGHLGWVRSV-AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTS 206
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+ + GH V L L LL+ D+ RVWD+R
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS P ++ GS DS + W +++ +
Sbjct: 267 PFAPKERCVKIFQGNVHNFEKNLLRCS--WSPDGSKIAAGSADSFLYPWHSLSVRSLGQI 324
Query: 340 THHKKSVRAMALHPTEDC-FASASAE 364
H+ S + ++ P E SAS++
Sbjct: 325 PRHRLSRQEDSVKPQEGIXILSASSD 350
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 47/190 (24%), Positives = 83/190 (43%)
Query: 294 IFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGK--TMLTLTHHKKSVRAMA 350
I L+GH+ V C F P + + D I W + YG TL H +V M
Sbjct: 60 IMLLSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWSV-YGDCDNYATLKGHSGAV--ME 115
Query: 351 LHPTED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG--VLATGGDN 405
LH D F++++ + + ++ GE + L + +NS G ++ TG D+
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW--RE 463
G++ WD + Q Q Q + A++++ T ++++ D IK+W R+
Sbjct: 175 GTVKLWDIRKKAAIQTFQNTYQ---------VLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 464 DE-TATPETH 472
++ T T H
Sbjct: 226 NKLTYTMRGH 235
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 239 (89.2 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 62/250 (24%), Positives = 107/250 (42%)
Query: 166 KCYRVISG--HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
KC +++G H W+ F S T S D T+K+WD+ KG LT GH V
Sbjct: 383 KCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSC 442
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
S ++ S+ DK K WD+ + + +GH V + P + LLT D
Sbjct: 443 TWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTL 502
Query: 284 RVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHK 343
+WD RT + +L GH +++ P + + K WD R ++++
Sbjct: 503 SIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGP 562
Query: 344 KSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLAT 401
+ + A AS I +L GE +H ++ + +++ + +G +L +
Sbjct: 563 SPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGE-IHKLMGHENEA-HTVVFSHDGEILFS 620
Query: 402 GGDNGSLWFW 411
GG +G++ W
Sbjct: 621 GGSDGTVRTW 630
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 68/270 (25%), Positives = 115/270 (42%)
Query: 196 DRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSY 255
DR K+ + K + LT GH + + + ++ D VK WDL + I ++
Sbjct: 373 DRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTF 432
Query: 256 HGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQ 315
GH V+ H + + + D ++WD+ ++ L GH ++V S+ P
Sbjct: 433 EGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNT 492
Query: 316 VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK-FNLPKG 374
++T S D T+ WD R G +L H S+ P AS A + K ++ K
Sbjct: 493 LLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRK- 551
Query: 375 EFLHNMLSQQ--KTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSL 431
L ++S + N + + G VLA NG + D KSG + ++ G
Sbjct: 552 --LLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSG----EIHKLM--GH- 602
Query: 432 DSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
++EA S+D G L + +D T++ W
Sbjct: 603 ENEAHTVVFSHD--GEILFSGGSDGTVRTW 630
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/205 (24%), Positives = 85/205 (41%)
Query: 258 HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV 317
H V C+ + P DIL++ G D + +V + + GH + + P+ ++
Sbjct: 351 HELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLA 410
Query: 318 TGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFL 377
T S D+T+K WDL G +LT H ++V + H + AS+S + K E
Sbjct: 411 TSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERC 470
Query: 378 HNMLSQQKTIINSMAVNE-EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAG 436
L +NS+ L T + +L WD ++G Q G + S
Sbjct: 471 RCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLY-----GHMHS--- 522
Query: 437 IYALSYDVTGSRLVTCEADKTIKMW 461
I +D G + +C+A K+W
Sbjct: 523 INDAIFDPRGHMIASCDACGVTKLW 547
Score = 147 (56.8 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 42/204 (20%), Positives = 80/204 (39%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C GH V S + + + S D+T KIWDV + TL GH + V +
Sbjct: 428 CILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFF 487
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
+ ++ DK + WD +S +GH+ + P ++ + V ++W
Sbjct: 488 PFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLW 547
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSV 346
D R + I ++ + V + + S + I DL+ G+ + H ++
Sbjct: 548 DFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGEIHKLMGHENEAH 607
Query: 347 RAMALHPTEDCFASASAENIKKFN 370
+ H E F+ S ++ ++
Sbjct: 608 TVVFSHDGEILFSGGSDGTVRTWS 631
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 44/184 (23%), Positives = 70/184 (38%)
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ S G+D+ K L + V+ + GH + HP+ D L T D+ ++WD+
Sbjct: 367 LVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKG 426
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMAL 351
I GH V S V + S D T K WD+ + TL H SV ++
Sbjct: 427 DCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEF 486
Query: 352 HPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDN-GSLWF 410
P + ++SA+ + L IN + G + D G
Sbjct: 487 FPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKL 546
Query: 411 WDWK 414
WD++
Sbjct: 547 WDFR 550
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 233 (87.1 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 63/234 (26%), Positives = 112/234 (47%)
Query: 179 RSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDD 238
R+ F H W T S D+ I+I+D +L T H + +R L V Y+ SA DD
Sbjct: 153 RAAKFIHRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDD 212
Query: 239 KQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHPTI-DILLTGGRDSVCRVWDIRTKMQIFA 296
++++ WD E ++ + + H + + ++P ++ ++G D +VW + + I
Sbjct: 213 RKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICT 272
Query: 297 LAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH-HKKSVRAMALHPT 354
L GH+ V C F T ++V+GS D +I WD++ K + TL + HK +V + T
Sbjct: 273 LEGHEKGVNCVEFL--TGGRIVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPFKT 330
Query: 355 EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSL 408
+ A +K +N L L+ +K +A + +A G D+G++
Sbjct: 331 W-IISGAEDSTVKIWNSQTFS-LEKELNFEKGRAWCVAAGKSDAIAVGFDSGAV 382
Score = 207 (77.9 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H V+SV F W T ++IW+ TL + + R + ++
Sbjct: 106 HSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWIA 165
Query: 234 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ 293
+A DD+Q++ +D E +I + H + L +HPT+ L++ D RVWD + +
Sbjct: 166 TASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWR 225
Query: 294 IFA-LAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ H + + + P DP++ V+GS D T+K W L +++ TL H+K V +
Sbjct: 226 MEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCV 283
Score = 192 (72.6 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 49/162 (30%), Positives = 83/162 (51%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVA-KGTLKLTLTGHIEQVRGLAVSSKHT 230
+ H ++RS+ + + + S DR I++WD + ++ H + +AV+ +
Sbjct: 188 TAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPEDP 247
Query: 231 YMFSAGD-DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD-SVCRVWDI 288
MF +G DK +K W L + + I + GH GV C+ T +++G D S+C VWDI
Sbjct: 248 EMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFL-TGGRIVSGSDDCSIC-VWDI 305
Query: 289 RTKMQIFALAG-HDNTVCSVFTRPTDPQVVTGSHDSTIKFWD 329
+T+ I L H N V F P +++G+ DST+K W+
Sbjct: 306 QTQKCIETLKNAHKNNV--TFVTPFKTWIISGAEDSTVKIWN 345
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/200 (20%), Positives = 85/200 (42%)
Query: 216 HIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILL 275
H ++V+ + S+ ++ +A V+ W+ + ++++ + +
Sbjct: 106 HSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWIA 165
Query: 276 TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKT 335
T D R++D T I H + + S+ PT P +++ S D I+ WD
Sbjct: 166 TASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWR 225
Query: 336 M-LTLTHHKKSVRAMALHPTE-DCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMA 392
M H + +A++P + + F S S + +K + L + E + + +K + N +
Sbjct: 226 MEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGV-NCVE 284
Query: 393 VNEEGVLATGGDNGSLWFWD 412
G + +G D+ S+ WD
Sbjct: 285 FLTGGRIVSGSDDCSICVWD 304
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 236 (88.1 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 55/252 (21%), Positives = 109/252 (43%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVR 221
HA + YR + GH V S+ F + S DRT+++W + + H VR
Sbjct: 50 HA--RAYRYV-GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVR 106
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDS 281
+ S+ + +A +DK +K W + + + + S + H V C P ++++ D
Sbjct: 107 SVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 282 VCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
++WD K + + V P + + D +K WD+R K +
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQV 226
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H V ++ HP + +AS++ +K +L +G ++ + + +++ +++G L
Sbjct: 227 HSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVF-TVSFSKDGELL 285
Query: 401 T-GGDNGSLWFW 411
T GG + + W
Sbjct: 286 TSGGADAQVLIW 297
Score = 207 (77.9 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 60/228 (26%), Positives = 99/228 (43%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WVR F + S D+TIKIWD + + + + T +
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA 202
Query: 234 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ 293
SAG D VK WD+ NK+++ Y H GV CL HP + L+T D ++ D+
Sbjct: 203 SAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRL 262
Query: 294 IFALAGHDNTVCSV-FTRPTDPQVVT-GSHDSTIKFWDLRY-------GKTMLTLTHHKK 344
I+ L GH V +V F++ D +++T G D+ + W + K L H +
Sbjct: 263 IYTLQGHTGPVFTVSFSK--DGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRLHFEA 320
Query: 345 SVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMA 392
S + ++P E I+ N PK E + ++ S +++ ++
Sbjct: 321 SPHLLDIYPRSPHSHEDRKETIE-IN-PKREVM-DLQSSSPPVVDVLS 365
Score = 198 (74.8 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 71/320 (22%), Positives = 131/320 (40%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + S F + T S D + +W + GH + V L S +
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA D+ V+ W L++ + H + V + +L+T D +VW +
Sbjct: 72 GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ +++L H + V C+ F+ P +V+ S D TIK WD + + +
Sbjct: 132 FRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDN 405
+ +P C ASA +++ +K +++ + L + +N ++ + G L T +
Sbjct: 191 FVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHY-QVHSCGVNCLSFHPLGNSLVTASSD 249
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDE 465
G++ D G Q P ++ +S+ G L + AD + +WR
Sbjct: 250 GTVKMLDLIEGRLIYTLQGHTGP--------VFTVSFSKDGELLTSGGADAQVLIWR--- 298
Query: 466 TATPETHPLNFKPPK-DIRR 484
T H L+ K PK +++R
Sbjct: 299 --TNFIH-LHCKDPKRNLKR 315
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 62/254 (24%), Positives = 100/254 (39%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
L+ + GH + S + +A D + W L+ + Y GH V L
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
P ++L + RD R+W + K + H V SV +VT S D +IK W
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 329 DLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTI 387
+ + + +L H VR P S S + IK ++ + ++N S
Sbjct: 130 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF-SDSVGF 188
Query: 388 INSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
N + N G +A+ G + ++ WD + Q Q G+ LS+ G
Sbjct: 189 ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQV--------HSCGVNCLSFHPLG 240
Query: 447 SRLVTCEADKTIKM 460
+ LVT +D T+KM
Sbjct: 241 NSLVTASSDGTVKM 254
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 44/219 (20%), Positives = 95/219 (43%)
Query: 246 LEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVC 305
LE + RS+ GH + + P + T D+ +W ++ + + GH + V
Sbjct: 5 LEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVT 64
Query: 306 SVFTRPTDPQVVTGSHDSTIKFWDL-RYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
S+ P + + S D T++ W L R GK+ H VR++ +AS +
Sbjct: 65 SLQFSPQGNLLASASRDRTVRLWVLDRKGKSS-EFKAHTAPVRSVDFSADGQLLVTASED 123
Query: 365 -NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQA 422
+IK +++ + FL++ L + + + +G ++ + ++ ++ WD +
Sbjct: 124 KSIKVWSMFRQRFLYS-LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN------- 175
Query: 423 QTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ V S DS + ++ G+ + + +D +K+W
Sbjct: 176 KQCVNNFS-DSVGFANFVDFNPNGTCIASAGSDHAVKIW 213
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 236 (88.1 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 58/252 (23%), Positives = 112/252 (44%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVR 221
HA + YR + GH V SV F + S DRT+++W K H VR
Sbjct: 50 HA--RAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVR 106
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDS 281
+ S+ ++ +A +DK +K W + + + + S + H V C P ++++ D
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 282 VCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
++WD K + + V P+ + + D T+K WD+R K +
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL- 399
H V ++ HP+ + +AS++ +K +L +G ++ + + +++ ++ G L
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGGELF 285
Query: 400 ATGGDNGSLWFW 411
A+GG + + W
Sbjct: 286 ASGGADTQVLLW 297
Score = 220 (82.5 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 56/223 (25%), Positives = 95/223 (42%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
NL SA +R W P+ + ++ H VRSV F + T S D++IK+
Sbjct: 73 NLLASASRDRTVRLWI-PDKRGKFSEFKA---HTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
W + + +L H VR S + S +DK +K WD + + ++ +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ +P+ + + G D +VWD+R + H V + P+ ++T S
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASS 248
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
D T+K DL G+ + TL H V ++ + FAS A+
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 183 (69.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 62/297 (20%), Positives = 115/297 (38%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + S+ + T S D + +W+ GH + V + S
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA D+ V+ W ++ + H + V + L T D +VW +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ +++L H + V C+ F+ P +V+ S D TIK WD + + +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 348 AMALHPTEDCFASA-SAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDN 405
+ +P+ C ASA S + +K +++ + L + + N ++ + G L T +
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSGNYLITASSD 249
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
G+L D G Q P ++ +S+ G + AD + +WR
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGP--------VFTVSFSKGGELFASGGADTQVLLWR 298
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 238 (88.8 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 82/321 (25%), Positives = 140/321 (43%)
Query: 159 PEWHAPWKCYRVISGHLGWVRSVAF--DHSNTWFCTGSADRTIKIWDVAKGTLKL--TLT 214
P+ P K +GH V ++ + + + G D T+KIWD A G + T
Sbjct: 288 PDTFVPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGM-DNTVKIWD-AYGDRRCIQTYM 345
Query: 215 GHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSY-HGHLSGVYCLGLHPTIDI 273
GH + VR + S+ S G D+Q + WD E K++ S+ +G + YC+ +P D
Sbjct: 346 GHSQAVRDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIP--YCIKFNPDDDK 403
Query: 274 ---LLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
L GG D WDI++ + H V ++ + + VT S D +++ WD
Sbjct: 404 QEQFLCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDW 463
Query: 331 RYGKTMLTLTHHKK-SVRAMALHPTEDCFASASAENI-------KKFNLPKGE-FLHNML 381
+ ++ S+ A+ALHP FA+ S +N +F + K + FL + +
Sbjct: 464 GIPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGHNV 523
Query: 382 SQQKTIINSMAVNEEGVLATGGDN-GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYAL 440
S + + +G GD+ G +FWDWK+ I++ + + I
Sbjct: 524 SGYAC---QLGFSPDGKFIYSGDSTGKAFFWDWKTSK-------IIKTINAHNNVCIGIE 573
Query: 441 SYDVTGSRLVTCEADKTIKMW 461
+ S++ TC + IK+W
Sbjct: 574 WAPLEPSKVATCSWNNEIKLW 594
Score = 148 (57.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 44/164 (26%), Positives = 72/164 (43%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVA-KGTLKLTLTGHIEQVRGLAVSSKHTYM 232
HLG V ++ F N F T S D+++++WD +K + + +A+ K +
Sbjct: 433 HLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPVVIKYISDPSMHSMPAVALHPKGKWF 492
Query: 233 FSAGDDKQVKCWD----LEQNKVIRSYHGH-LSGVYC-LGLHPTIDILLTGGRDSVCRVW 286
+ D Q+ + NK R + GH +SG C LG P + +G W
Sbjct: 493 AAQSLDNQILIYSARDRFRMNKKKR-FLGHNVSGYACQLGFSPDGKFIYSGDSTGKAFFW 551
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWD 329
D +T I + H+N + P +P +V T S ++ IK WD
Sbjct: 552 DWKTSKIIKTINAHNNVCIGIEWAPLEPSKVATCSWNNEIKLWD 595
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/148 (25%), Positives = 62/148 (41%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
+L SA M+ W + + +C + GH VR + F + F + DR ++
Sbjct: 318 HLLLSAGMDNTVKIW---DAYGDRRCIQTYMGHSQAVRDICFSNDGRRFLSCGYDRQTRL 374
Query: 202 WDVAKGTLKLTLT-GHIEQ-VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHL 259
WD G + + T G I ++ K G DK++ WD++ N++++ Y HL
Sbjct: 375 WDTETGKILSSFTNGKIPYCIKFNPDDDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHL 434
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWD 287
V + +T D RVWD
Sbjct: 435 GAVNTITFLDDNRRFVTSSDDKSLRVWD 462
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 243 (90.6 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 75/295 (25%), Positives = 129/295 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH ++AF + TGS D T+++W+ G L+ T GH V +A+SS
Sbjct: 768 KILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSD 827
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ S G + VK WD ++++ +G + P + G +D +WD
Sbjct: 828 GRQIVS-GSIEAVKLWDAATGDLLKTLASGFAG--SVAFSPDSRQIAAGFKDGKIFIWDA 884
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+Q L H + S+ P Q+VT S DSTIK WD+ G + H K V
Sbjct: 885 AGTLQK-TLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGH-SKHVTT 942
Query: 349 MALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSM-AVNEEGVLATGGDNG 406
M L P AS SA+ IK ++ G+ + T+ + +++ +++ +
Sbjct: 943 MVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE-- 1000
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
++ WD +G + Q + D I A+S D G + + + IK+W
Sbjct: 1001 AVKIWDAATG----KVQNSFES---DDVFTIVAVSPD--GKHIASGHCNGRIKLW 1046
Score = 171 (65.3 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 67/302 (22%), Positives = 121/302 (40%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W A + + H G + S+AF T S D TIK WD+ G ++ + GH + V
Sbjct: 882 WDAAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAV-GHSKHV 940
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRD 280
+ +S + S DK +K WD + ++ GHL V + +++ +
Sbjct: 941 TTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE 1000
Query: 281 SVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
+V ++WD T K+Q + D+ V P + +G + IK WD+ G + T+
Sbjct: 1001 AV-KIWDAATGKVQNSFES--DDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTM 1057
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL 399
++ ++ T + F E I FN + + S +I S + + +
Sbjct: 1058 AGYRSKFDSLV---TTEVFDIQLQEAI--FNT---QITGLVFSPDAKLILSTST-DRAIK 1108
Query: 400 ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIK 459
G L + + T S I+++++ G + ADKTI+
Sbjct: 1109 LWDAATGDL---QKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIR 1165
Query: 460 MW 461
+W
Sbjct: 1166 VW 1167
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 243 (90.6 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 73/276 (26%), Positives = 124/276 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VR++ + H++ W T +K W +K+ H E +R + S
Sbjct: 156 ILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTD 214
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+ DD V+ WD + R GH + V C+ HPT ++++G +DS + WD
Sbjct: 215 NKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH-HKKSV 346
+T + L H NTV V ++T S D K +D+R K L + HKK
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEA 334
Query: 347 RAMALHPT-EDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
A+A HP E FAS ++ F ++ + + M + +I S+A + G +L +G
Sbjct: 335 TAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS 394
Query: 404 DNGSLWFWDW-KSGHNFQQAQTI-VQPGSLDSEAGI 437
++ + FW + G + + + PG SE G+
Sbjct: 395 NDHTSKFWTRNRPGDKMRDRYNLNLLPGM--SEDGV 428
Score = 236 (88.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 81/295 (27%), Positives = 127/295 (43%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG++ +W+ + L H VR + S +M +A VK W N V
Sbjct: 136 TGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV 195
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ + H + PT + T D R+WD + L GH V V P
Sbjct: 196 -KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHP 254
Query: 312 TDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KK 368
T VV+GS DS IKFWD + G+++ TL HK +V + L+ + +AS +++ K
Sbjct: 255 TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL 314
Query: 369 FNLPK-GEFLHNMLSQQK--TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
F++ E L +K T + V+E G+ A+GG +GSL FW H + +
Sbjct: 315 FDIRNLKEELQVFRGHKKEATAVAWHPVHE-GLFASGGSDGSLLFW-----HVGVEKE-- 366
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATP--ETHPLNFKP 478
V + E I++L++ G L + D T K W + + + LN P
Sbjct: 367 VGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLP 421
Score = 197 (74.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 53/214 (24%), Positives = 96/214 (44%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + ++ H +R +F ++ F T S D T++IWD + + L GH V
Sbjct: 188 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 247
Query: 221 RGLAVSSKHTYMFSAGDDKQ--VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ + + S D Q +K WD + + + + H H + V + L+ + LLT
Sbjct: 248 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 307
Query: 279 RDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTM 336
RD +C+++DIR K ++ GH +V P + +G D ++ FW + K +
Sbjct: 308 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 367
Query: 337 LTLTH-HKKSVRAMALHPTEDCFASASAENIKKF 369
+ H+ + ++A HP S S ++ KF
Sbjct: 368 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 401
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 243 (90.6 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 73/276 (26%), Positives = 124/276 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VR++ + H++ W T +K W +K+ H E +R + S
Sbjct: 152 ILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTD 210
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+ DD V+ WD + R GH + V C+ HPT ++++G +DS + WD
Sbjct: 211 NKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 270
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH-HKKSV 346
+T + L H NTV V ++T S D K +D+R K L + HKK
Sbjct: 271 PKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEA 330
Query: 347 RAMALHPT-EDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
A+A HP E FAS ++ F ++ + + M + +I S+A + G +L +G
Sbjct: 331 TAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS 390
Query: 404 DNGSLWFWDW-KSGHNFQQAQTI-VQPGSLDSEAGI 437
++ + FW + G + + + PG SE G+
Sbjct: 391 NDHTSKFWTRNRPGDKMRDRYNLNLLPGM--SEDGV 424
Score = 236 (88.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 81/295 (27%), Positives = 127/295 (43%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG++ +W+ + L H VR + S +M +A VK W N V
Sbjct: 132 TGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV 191
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ + H + PT + T D R+WD + L GH V V P
Sbjct: 192 -KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHP 250
Query: 312 TDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KK 368
T VV+GS DS IKFWD + G+++ TL HK +V + L+ + +AS +++ K
Sbjct: 251 TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL 310
Query: 369 FNLPK-GEFLHNMLSQQK--TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
F++ E L +K T + V+E G+ A+GG +GSL FW H + +
Sbjct: 311 FDIRNLKEELQVFRGHKKEATAVAWHPVHE-GLFASGGSDGSLLFW-----HVGVEKE-- 362
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATP--ETHPLNFKP 478
V + E I++L++ G L + D T K W + + + LN P
Sbjct: 363 VGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLP 417
Score = 197 (74.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 53/214 (24%), Positives = 96/214 (44%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + ++ H +R +F ++ F T S D T++IWD + + L GH V
Sbjct: 184 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 243
Query: 221 RGLAVSSKHTYMFSAGDDKQ--VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ + + S D Q +K WD + + + + H H + V + L+ + LLT
Sbjct: 244 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 303
Query: 279 RDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTM 336
RD +C+++DIR K ++ GH +V P + +G D ++ FW + K +
Sbjct: 304 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 363
Query: 337 LTLTH-HKKSVRAMALHPTEDCFASASAENIKKF 369
+ H+ + ++A HP S S ++ KF
Sbjct: 364 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 397
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 243 (90.6 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 73/276 (26%), Positives = 124/276 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VR++ + H++ W T +K W +K+ H E +R + S
Sbjct: 156 ILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTD 214
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+ DD V+ WD + R GH + V C+ HPT ++++G +DS + WD
Sbjct: 215 NKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH-HKKSV 346
+T + L H NTV V ++T S D K +D+R K L + HKK
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEA 334
Query: 347 RAMALHPT-EDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
A+A HP E FAS ++ F ++ + + M + +I S+A + G +L +G
Sbjct: 335 TAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS 394
Query: 404 DNGSLWFWDW-KSGHNFQQAQTI-VQPGSLDSEAGI 437
++ + FW + G + + + PG SE G+
Sbjct: 395 NDHTSKFWTRNRPGDKMRDRYNLNLLPGM--SEDGV 428
Score = 236 (88.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 81/295 (27%), Positives = 127/295 (43%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG++ +W+ + L H VR + S +M +A VK W N V
Sbjct: 136 TGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV 195
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ + H + PT + T D R+WD + L GH V V P
Sbjct: 196 -KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHP 254
Query: 312 TDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KK 368
T VV+GS DS IKFWD + G+++ TL HK +V + L+ + +AS +++ K
Sbjct: 255 TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL 314
Query: 369 FNLPK-GEFLHNMLSQQK--TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
F++ E L +K T + V+E G+ A+GG +GSL FW H + +
Sbjct: 315 FDIRNLKEELQVFRGHKKEATAVAWHPVHE-GLFASGGSDGSLLFW-----HVGVEKE-- 366
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATP--ETHPLNFKP 478
V + E I++L++ G L + D T K W + + + LN P
Sbjct: 367 VGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLP 421
Score = 197 (74.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 53/214 (24%), Positives = 96/214 (44%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + ++ H +R +F ++ F T S D T++IWD + + L GH V
Sbjct: 188 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 247
Query: 221 RGLAVSSKHTYMFSAGDDKQ--VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ + + S D Q +K WD + + + + H H + V + L+ + LLT
Sbjct: 248 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 307
Query: 279 RDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTM 336
RD +C+++DIR K ++ GH +V P + +G D ++ FW + K +
Sbjct: 308 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 367
Query: 337 LTLTH-HKKSVRAMALHPTEDCFASASAENIKKF 369
+ H+ + ++A HP S S ++ KF
Sbjct: 368 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 401
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 242 (90.2 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 84/316 (26%), Positives = 138/316 (43%)
Query: 162 HAPWKCYRVISGHLGWVRSVAF-DHSNTWFCTGSADRTIKIWDVAK-GTLKLTLTGHIEQ 219
+ P + SGH V ++ F + D +KIWDV G T GH +
Sbjct: 269 YIPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKA 328
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYH-GHLSGVYCLGLHPTID---ILL 275
VR + S+ + +AG DK +K WD E +VI ++ G + Y + L+P D ILL
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIP--YVVKLNPDDDKQNILL 386
Query: 276 TGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKT 335
G D WDI T H V ++ + + VT S D +++ W+
Sbjct: 387 AGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 446
Query: 336 MLTLTH-HKKSVRAMALHPTEDCFASASAENI-------KKFNLPKGE-FLHNMLSQQKT 386
+ ++ H S+ ++++HP + A+ S +N ++F L K + F ++++
Sbjct: 447 IKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 506
Query: 387 IINSMAVNEEGVLATGGDN-GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
+N + +G GD G WFWDWKS F+ T+ + I A + +
Sbjct: 507 QVN---FSPDGRFVMSGDGEGKCWFWDWKSCKVFR---TL----KCHNGVCIGAEWHPLE 556
Query: 446 GSRLVTCEADKTIKMW 461
S++ TC D IK W
Sbjct: 557 QSKVATCGWDGLIKYW 572
Score = 137 (53.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 40/165 (24%), Positives = 75/165 (45%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVA-KGTLKLTLTGHIEQVRGLAVSSKHTYM 232
HLG V ++ F +N F T S D+++++W+ +K H+ + ++V ++
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 470
Query: 233 FSAGDDKQVKCWDLEQ----NKVIRSYHGHL-SGVYC-LGLHPTIDILLTGGRDSVCRVW 286
+ D Q+ + + NK R + GH+ +G C + P +++G + C W
Sbjct: 471 AAQSLDNQILIYSTRERFQLNKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 529
Query: 287 DIRTKMQIFALAGHDNTVC-SVFTRPTDP-QVVTGSHDSTIKFWD 329
D ++ ++F N VC P + +V T D IK+WD
Sbjct: 530 DWKS-CKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
Score = 37 (18.1 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 112 GPSAQPKGLNNVG 124
G +A P G+N VG
Sbjct: 120 GYAADPSGMNYVG 132
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 243 (90.6 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 73/276 (26%), Positives = 124/276 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VR++ + H++ W T +K W +K+ H E +R + S
Sbjct: 156 ILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTD 214
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+ DD V+ WD + R GH + V C+ HPT ++++G +DS + WD
Sbjct: 215 NKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH-HKKSV 346
+T + L H NTV V ++T S D K +D+R K L + HKK
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEA 334
Query: 347 RAMALHPT-EDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
A+A HP E FAS ++ F ++ + + M + +I S+A + G +L +G
Sbjct: 335 TAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS 394
Query: 404 DNGSLWFWDW-KSGHNFQQAQTI-VQPGSLDSEAGI 437
++ + FW + G + + + PG SE G+
Sbjct: 395 NDHTSKFWTRNRPGDKMRDRYNLNLLPGM--SEDGV 428
Score = 236 (88.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 81/295 (27%), Positives = 127/295 (43%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG++ +W+ + L H VR + S +M +A VK W N V
Sbjct: 136 TGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV 195
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ + H + PT + T D R+WD + L GH V V P
Sbjct: 196 -KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHP 254
Query: 312 TDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KK 368
T VV+GS DS IKFWD + G+++ TL HK +V + L+ + +AS +++ K
Sbjct: 255 TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL 314
Query: 369 FNLPK-GEFLHNMLSQQK--TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
F++ E L +K T + V+E G+ A+GG +GSL FW H + +
Sbjct: 315 FDIRNLKEELQVFRGHKKEATAVAWHPVHE-GLFASGGSDGSLLFW-----HVGVEKE-- 366
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATP--ETHPLNFKP 478
V + E I++L++ G L + D T K W + + + LN P
Sbjct: 367 VGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLP 421
Score = 197 (74.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 53/214 (24%), Positives = 96/214 (44%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + ++ H +R +F ++ F T S D T++IWD + + L GH V
Sbjct: 188 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 247
Query: 221 RGLAVSSKHTYMFSAGDDKQ--VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ + + S D Q +K WD + + + + H H + V + L+ + LLT
Sbjct: 248 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 307
Query: 279 RDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTM 336
RD +C+++DIR K ++ GH +V P + +G D ++ FW + K +
Sbjct: 308 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 367
Query: 337 LTLTH-HKKSVRAMALHPTEDCFASASAENIKKF 369
+ H+ + ++A HP S S ++ KF
Sbjct: 368 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 401
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 243 (90.6 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 73/276 (26%), Positives = 124/276 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VR++ + H++ W T +K W +K+ H E +R + S
Sbjct: 156 ILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTD 214
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+ DD V+ WD + R GH + V C+ HPT ++++G +DS + WD
Sbjct: 215 NKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH-HKKSV 346
+T + L H NTV V ++T S D K +D+R K L + HKK
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEA 334
Query: 347 RAMALHPT-EDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
A+A HP E FAS ++ F ++ + + M + +I S+A + G +L +G
Sbjct: 335 TAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS 394
Query: 404 DNGSLWFWDW-KSGHNFQQAQTI-VQPGSLDSEAGI 437
++ + FW + G + + + PG SE G+
Sbjct: 395 NDHTSKFWTRNRPGDKMRDRYNLNLLPGM--SEDGV 428
Score = 236 (88.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 81/295 (27%), Positives = 127/295 (43%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG++ +W+ + L H VR + S +M +A VK W N V
Sbjct: 136 TGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV 195
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ + H + PT + T D R+WD + L GH V V P
Sbjct: 196 -KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHP 254
Query: 312 TDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KK 368
T VV+GS DS IKFWD + G+++ TL HK +V + L+ + +AS +++ K
Sbjct: 255 TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL 314
Query: 369 FNLPK-GEFLHNMLSQQK--TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
F++ E L +K T + V+E G+ A+GG +GSL FW H + +
Sbjct: 315 FDIRNLKEELQVFRGHKKEATAVAWHPVHE-GLFASGGSDGSLLFW-----HVGVEKE-- 366
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATP--ETHPLNFKP 478
V + E I++L++ G L + D T K W + + + LN P
Sbjct: 367 VGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLP 421
Score = 197 (74.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 53/214 (24%), Positives = 96/214 (44%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + ++ H +R +F ++ F T S D T++IWD + + L GH V
Sbjct: 188 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 247
Query: 221 RGLAVSSKHTYMFSAGDDKQ--VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ + + S D Q +K WD + + + + H H + V + L+ + LLT
Sbjct: 248 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 307
Query: 279 RDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTM 336
RD +C+++DIR K ++ GH +V P + +G D ++ FW + K +
Sbjct: 308 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 367
Query: 337 LTLTH-HKKSVRAMALHPTEDCFASASAENIKKF 369
+ H+ + ++A HP S S ++ KF
Sbjct: 368 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 401
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 243 (90.6 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 73/276 (26%), Positives = 124/276 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VR++ + H++ W T +K W +K+ H E +R + S
Sbjct: 156 ILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTD 214
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+ DD V+ WD + R GH + V C+ HPT ++++G +DS + WD
Sbjct: 215 NKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH-HKKSV 346
+T + L H NTV V ++T S D K +D+R K L + HKK
Sbjct: 275 PKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEA 334
Query: 347 RAMALHPT-EDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
A+A HP E FAS ++ F ++ + + M + +I S+A + G +L +G
Sbjct: 335 TAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS 394
Query: 404 DNGSLWFWDW-KSGHNFQQAQTI-VQPGSLDSEAGI 437
++ + FW + G + + + PG SE G+
Sbjct: 395 NDHTSKFWTRNRPGDKMRDRYNLNLLPGM--SEDGV 428
Score = 236 (88.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 81/295 (27%), Positives = 127/295 (43%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG++ +W+ + L H VR + S +M +A VK W N V
Sbjct: 136 TGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV 195
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ + H + PT + T D R+WD + L GH V V P
Sbjct: 196 -KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHP 254
Query: 312 TDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KK 368
T VV+GS DS IKFWD + G+++ TL HK +V + L+ + +AS +++ K
Sbjct: 255 TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL 314
Query: 369 FNLPK-GEFLHNMLSQQK--TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
F++ E L +K T + V+E G+ A+GG +GSL FW H + +
Sbjct: 315 FDIRNLKEELQVFRGHKKEATAVAWHPVHE-GLFASGGSDGSLLFW-----HVGVEKE-- 366
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATP--ETHPLNFKP 478
V + E I++L++ G L + D T K W + + + LN P
Sbjct: 367 VGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLP 421
Score = 197 (74.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 53/214 (24%), Positives = 96/214 (44%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + ++ H +R +F ++ F T S D T++IWD + + L GH V
Sbjct: 188 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 247
Query: 221 RGLAVSSKHTYMFSAGDDKQ--VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ + + S D Q +K WD + + + + H H + V + L+ + LLT
Sbjct: 248 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 307
Query: 279 RDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTM 336
RD +C+++DIR K ++ GH +V P + +G D ++ FW + K +
Sbjct: 308 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 367
Query: 337 LTLTH-HKKSVRAMALHPTEDCFASASAENIKKF 369
+ H+ + ++A HP S S ++ KF
Sbjct: 368 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 401
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 240 (89.5 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 54/188 (28%), Positives = 91/188 (48%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV + + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 74 HTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ T ++++G + V R
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLR 193
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V S+ Q ++GS D TI+ W L + + T H +
Sbjct: 194 VWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 253
Query: 345 SVRAMALH 352
V A+ ++
Sbjct: 254 GVWALQVN 261
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 57/215 (26%), Positives = 99/215 (46%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ---IFALAGHDNTVCSVFTRPTDPQV 316
+GV L L P ++ L T GRDS+ R+W + Q I ++ H + V + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTL 90
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IK 367
++ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 ISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLT 150
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
+ LS K I S+A+N+ G V+ +G L WD ++ A+ +
Sbjct: 151 ALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTC-----AKLMK 205
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + L+ D G++ ++ +D TI++W
Sbjct: 206 LKGHTDNVKSLL-LNRD--GTQCLSGSSDGTIRLW 237
Score = 165 (63.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 39/164 (23%), Positives = 73/164 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + + T +GS ++ +++WD + L GH + V+ L ++ T
Sbjct: 164 LSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGT 223
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTDLRN 283
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDP--QVVTGSHDSTIKFWDLR 331
M++ + R DP + + S + W L+
Sbjct: 284 PDMRVLICEEKAPVLRMELDRSADPPQSIWVSTTKSFVNKWSLK 327
Score = 139 (54.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 50/236 (21%), Positives = 100/236 (42%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDV---AKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
V ++ D + T D I+IW V + ++ H + V + + + S
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLIS 92
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
A D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 ASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTAL 152
Query: 295 FA---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
A L+G+ +++ S+ T +++GS + ++ WD R ++ L H +
Sbjct: 153 TASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDN 212
Query: 346 VRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V+++ L+ C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 VKSLLLNRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 257
Score = 42 (19.8 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWD 412
+I+ +N++ + T N S+ FWD
Sbjct: 362 SIVQCHILNDKRHILTKDTNNSVAFWD 388
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 239 (89.2 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 98 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 157
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C HP + I++T
Sbjct: 158 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 217
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 218 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 266
Score = 214 (80.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 65 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 124
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 125 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 184
Query: 286 WDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
WD + K + L GH N C+ F P P ++TGS D T++ W + TL + +
Sbjct: 185 WDYQNKTCVQTLEGHAQNVSCASF-HPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 243
Query: 345 SVRAMA 350
V +A
Sbjct: 244 RVWCVA 249
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 45/182 (24%), Positives = 84/182 (46%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT--LTGHIEQVRGLAVSSKHTYMFSA 235
VR+ F W TG+ D I++++ TL+ H + +R +AV ++ ++
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNY--NTLERVHMFEAHSDYIRCIAVHPTQPFILTS 88
Query: 236 GDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHPTIDI-LLTGGRDSVCRVWDIRTKMQ 293
DD +K WD ++ + + GH V + ++P + + D +VW + +
Sbjct: 89 SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSP 148
Query: 294 IFALAGHDNTV-CSVFTRPTD-PQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMAL 351
F L GH+ V C + D P +++G+ D +K WD + + TL H ++V +
Sbjct: 149 NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 208
Query: 352 HP 353
HP
Sbjct: 209 HP 210
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 48/221 (21%), Positives = 93/221 (42%)
Query: 198 TIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG 257
++ +W+ TL T VR ++ ++ + DD Q++ ++ + + +
Sbjct: 9 SVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEA 68
Query: 258 HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QIFALAGHDNTVCSVFTRPTDP 314
H + C+ +HPT +LT D + ++WD K Q+F GH + V + P D
Sbjct: 69 HSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE--GHTHYVMQIVINPKDN 126
Query: 315 -QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTED---CFASASAENIKKFN 370
Q + S D TIK W L TL H+K V + + D + A +K ++
Sbjct: 127 NQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 186
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFW 411
+ + + + + E ++ TG ++G++ W
Sbjct: 187 YQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 227
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 236 (88.1 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 62/219 (28%), Positives = 98/219 (44%)
Query: 161 WHAPWKC--YRVISGHLGWVRSVAF--------DHSNTWFCTGSADRTIKIWDVAKGTLK 210
W P C R + GH V +++F + S+ + +AD ++K+W +
Sbjct: 243 WKVP-DCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPI 301
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPT 270
+ GH +V + ++ + D + WDLE + I GH GV+ L HP
Sbjct: 302 ADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPD 361
Query: 271 IDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDL 330
+ TGG DS RVWD+RT + L GH + S+ P V TGS D+ K WDL
Sbjct: 362 GSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDL 421
Query: 331 RYGKTMLTLTHHKKSVRAMALHPTEDCFASASA-ENIKK 368
R + + T+ H+ V ++ P + + A +N K
Sbjct: 422 RQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAK 460
Score = 227 (85.0 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 55/199 (27%), Positives = 88/199 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I GH V V + S + T D + ++WD+ L GH + V L +
Sbjct: 304 IEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGS 363
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ G D + WDL + + GH+ +Y + P + TG D+ C+VWD+R
Sbjct: 364 LAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQ 423
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ I+ + H N V SV +P D ++TG++D+T K W + TL H+ V +
Sbjct: 424 RRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGV 483
Query: 350 ALHPTEDCFASASAENIKK 368
L P A+ S + K
Sbjct: 484 DLSPDGQLIATCSYDRTFK 502
Score = 223 (83.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 75/292 (25%), Positives = 121/292 (41%)
Query: 183 FDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY--------MFS 234
F ++ T S K+W V TL TL GH V ++ + T M S
Sbjct: 224 FSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMAS 283
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
D VK W L+ ++ I GH V + HP+ L T D R+WD+ + +I
Sbjct: 284 CAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEI 343
Query: 295 FALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPT 354
GH V + P TG DS + WDLR G+ ++ L H K + ++ P
Sbjct: 344 LHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPN 403
Query: 355 EDCFASASAENI-KKFNLPKGEFLHNMLSQQKTIIN-SMAVNEEGVLATGGDNGSLWFWD 412
A+ S +N K ++L + ++ + + Q + + N+ L TG + + W
Sbjct: 404 GFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW- 462
Query: 413 WKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
+ + +T+ G G+ LS D G + TC D+T K+W +
Sbjct: 463 --THPGWSPLKTLA--GHEGKVMGV-DLSPD--GQLIATCSYDRTFKLWMSE 507
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 44/157 (28%), Positives = 68/157 (43%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYM 232
GH V + F + TG D ++WD+ G + L GHI+++ + S ++
Sbjct: 348 GHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHV 407
Query: 233 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID-ILLTGGRDSVCRVWDIRTK 291
+ D K WDL Q + I + H + V + P LLTG D+ ++W
Sbjct: 408 ATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGW 467
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ LAGH+ V V P + T S+D T K W
Sbjct: 468 SPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 44/210 (20%), Positives = 87/210 (41%)
Query: 263 YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP--------TDP 314
YC P +L+T +C++W + I L GH+ V ++ P +D
Sbjct: 221 YCQ-FSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDV 279
Query: 315 QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KKFNLP- 372
+ + + D ++K W L + + + H V + HP+ + ++ + ++L
Sbjct: 280 NMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEV 339
Query: 373 KGEFLHNMLSQQKTIINSMAVNEEGVLA-TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSL 431
+ E LH K + + + + +G LA TGG + WD ++G + G +
Sbjct: 340 QEEILHQE-GHSKGV-HDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLE-----GHI 392
Query: 432 DSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
IY++++ G + T D K+W
Sbjct: 393 KE---IYSINFSPNGFHVATGSGDNACKVW 419
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 235 (87.8 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 63/258 (24%), Positives = 113/258 (43%)
Query: 161 WHAPWKCYRVI-SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W+A + + H V ++ + H + W +G AD IKIW +K H E
Sbjct: 120 WNASSFTFETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTES 179
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
+R +A SS + + DD +K W+ K R GH V HP + ++ + +
Sbjct: 180 IRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASK 239
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTG-SHDSTIKFWDLRYGKTMLT 338
D++ ++WD R+ I ++ +TV +PT ++ S D + + +D+RY L
Sbjct: 240 DNLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELM 299
Query: 339 LTHHKKSVRAMALHP-TEDCFASASAE-NIKKFNLPKG--EFLHNMLSQQKTIINSMAVN 394
+ + HP E F A + ++K F+L + E + + I S++ N
Sbjct: 300 CVRDETDYMTLEWHPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYN 359
Query: 395 EEG-VLATGGDNGSLWFW 411
G + AT + ++ FW
Sbjct: 360 PVGHIFATAAKDRTIRFW 377
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 58/276 (21%), Positives = 107/276 (38%)
Query: 201 IWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLS 260
+W+ + T + + H V + S +M S D +K W + V H
Sbjct: 119 LWNASSFTFETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTE 178
Query: 261 GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGS 320
+ + +T D++ ++W+ Q L+GH V S P + + S
Sbjct: 179 SIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASAS 238
Query: 321 HDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTED--CFASASAENIKKFNLPKGEFLH 378
D+ +K WD R G + ++ K +V PT+ A + ++ + F++ +
Sbjct: 239 KDNLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDI-RYSMKE 297
Query: 379 NMLSQQKTIINSMAVN--EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAG 436
M + +T ++ + E + +GSL +D N + TI P + D
Sbjct: 298 LMCVRDETDYMTLEWHPINESMFTLACYDGSLKHFDLLQNLN-EPILTI--PYAHDK--C 352
Query: 437 IYALSYDVTGSRLVTCEADKTIKMWREDETATPETH 472
I +LSY+ G T D+TI+ W P +
Sbjct: 353 ITSLSYNPVGHIFATAAKDRTIRFWTRARPIDPNAY 388
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 243 (90.6 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 73/276 (26%), Positives = 124/276 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H VR++ + H++ W T +K W +K+ H E +R + S
Sbjct: 157 ILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTD 215
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV--CRVWD 287
+ DD V+ WD + R GH + V C+ HPT ++++G +DS + WD
Sbjct: 216 NKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 275
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH-HKKSV 346
+T + L H NTV V ++T S D K +D+R K L + HKK
Sbjct: 276 PKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEA 335
Query: 347 RAMALHPT-EDCFASASAENIKKF-NLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGG 403
A+A HP E FAS ++ F ++ + + M + +I S+A + G +L +G
Sbjct: 336 TAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS 395
Query: 404 DNGSLWFWDW-KSGHNFQQAQTI-VQPGSLDSEAGI 437
++ + FW + G + + + PG SE G+
Sbjct: 396 NDHTSKFWTRNRPGDKMRDRYNLNLLPGM--SEDGV 429
Score = 236 (88.1 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 81/295 (27%), Positives = 127/295 (43%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG++ +W+ + L H VR + S +M +A VK W N V
Sbjct: 137 TGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNV 196
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ + H + PT + T D R+WD + L GH V V P
Sbjct: 197 -KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHP 255
Query: 312 TDPQVVTGSHDST--IKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KK 368
T VV+GS DS IKFWD + G+++ TL HK +V + L+ + +AS +++ K
Sbjct: 256 TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKL 315
Query: 369 FNLPK-GEFLHNMLSQQK--TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTI 425
F++ E L +K T + V+E G+ A+GG +GSL FW H + +
Sbjct: 316 FDIRNLKEELQVFRGHKKEATAVAWHPVHE-GLFASGGSDGSLLFW-----HVGVEKE-- 367
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWREDETATP--ETHPLNFKP 478
V + E I++L++ G L + D T K W + + + LN P
Sbjct: 368 VGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLP 422
Score = 197 (74.4 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 53/214 (24%), Positives = 96/214 (44%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + ++ H +R +F ++ F T S D T++IWD + + L GH V
Sbjct: 189 WQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADV 248
Query: 221 RGLAVSSKHTYMFSAGDDKQ--VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ + + S D Q +K WD + + + + H H + V + L+ + LLT
Sbjct: 249 KCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTAS 308
Query: 279 RDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTM 336
RD +C+++DIR K ++ GH +V P + +G D ++ FW + K +
Sbjct: 309 RDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEV 368
Query: 337 LTLTH-HKKSVRAMALHPTEDCFASASAENIKKF 369
+ H+ + ++A HP S S ++ KF
Sbjct: 369 GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKF 402
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 236 (88.1 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
+V+ D + + +AD ++K+W + + GH +V + ++ + D+
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 344
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+ WDLE + I GH GVY + H + TGG D+ RVWD+RT I L G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H + + P + TGS D+T K WDLR + + T+ H+ V + P F
Sbjct: 405 HLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFL 464
Query: 360 SASA-ENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFW 411
A +N K G L+ + + + ++ +G ++AT + + W
Sbjct: 465 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 208 (78.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 53/199 (26%), Positives = 85/199 (42%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I GH V V + S + T DR+ ++WD+ L GH V +A +
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 377
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ G D + WDL + I GHL +Y + P + TG D+ C+VWD+R
Sbjct: 378 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQ 437
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ ++ + H N V V P ++TG++D+T K W + TL H+ V +
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 350 ALHPTEDCFASASAENIKK 368
+ A+ S + K
Sbjct: 498 DISSDGQLIATCSYDRTFK 516
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 28/122 (22%), Positives = 50/122 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GHL + ++F + TGS D T K+WD+ + T+ H V G+
Sbjct: 397 RCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 456
Query: 226 SSKH-TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
H ++ + D K W +++ GH V L + ++ T D +
Sbjct: 457 EPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 516
Query: 285 VW 286
+W
Sbjct: 517 LW 518
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 61/297 (20%), Positives = 119/297 (40%)
Query: 184 DHSNTWFCTG-SADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVK 242
++ TW+ G ++ + ++W +A +L + +E+ R H + Q++
Sbjct: 160 EYQQTWYHEGPNSLKVARLW-IANYSLPRAMK-RLEEAR------LHKEIPETTRTSQMQ 211
Query: 243 CWDLEQNKVIRSYHGHLSGV-------YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIF 295
E +K +RS + S + YC P +L T +C++W + +
Sbjct: 212 ----ELHKSLRSLNNFCSQIGDDRPISYC-HFSPNSKMLATACWSGLCKLWSVPDCSLLH 266
Query: 296 ALAGHDNTVCSVFTRPT--------DPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
L GH+ V ++ P D + + + D ++K W L + + + H V
Sbjct: 267 TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 326
Query: 348 AMALHPTEDCFASASAENI-KKFNLP-KGEFLHNMLSQQKTIINSMAVNEEGVLA-TGGD 404
+ HP+ + + + ++L + E LH + +A +++G LA TGG
Sbjct: 327 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGL 384
Query: 405 NGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ WD ++G + G L IY +S+ G + T D T K+W
Sbjct: 385 DAFGRVWDLRTGRCIMFLE-----GHLKE---IYGISFSPNGYHIATGSGDNTCKVW 433
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 236 (88.1 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
+V+ D + + +AD ++K+W + + GH +V + ++ + D+
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDR 344
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+ WDLE + I GH GVY + H + TGG D+ RVWD+RT I L G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H + + P + TGS D+T K WDLR + + T+ H+ V + P F
Sbjct: 405 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 464
Query: 360 SASA-ENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFW 411
A +N K G L+ + + + ++ +G ++AT + + W
Sbjct: 465 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 209 (78.6 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 53/199 (26%), Positives = 85/199 (42%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I GH V V + S + T DR+ ++WD+ L GH V +A +
Sbjct: 318 IEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 377
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ G D + WDL + I GHL +Y + P + TG D+ C+VWD+R
Sbjct: 378 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQ 437
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ ++ + H N V V P ++TG++D+T K W + TL H+ V +
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 350 ALHPTEDCFASASAENIKK 368
+ A+ S + K
Sbjct: 498 DISSDGQLIATCSYDRTFK 516
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 28/122 (22%), Positives = 49/122 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GHL + + F + TGS D T K+WD+ + T+ H V G+
Sbjct: 397 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 456
Query: 226 SSKH-TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
H ++ + D K W +++ GH V L + ++ T D +
Sbjct: 457 EPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 516
Query: 285 VW 286
+W
Sbjct: 517 LW 518
Score = 119 (46.9 bits), Expect = 0.00058, P = 0.00058
Identities = 45/210 (21%), Positives = 84/210 (40%)
Query: 263 YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPT--------DP 314
YC P +L T +C++W + + L GH+ V ++ P D
Sbjct: 235 YC-HFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDV 293
Query: 315 QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KKFNLP- 372
+ + + D ++K W L + + + H V + HP+ + + + ++L
Sbjct: 294 NLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 373 KGEFLHNMLSQQKTIINSMAVNEEGVLA-TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSL 431
+ E LH + +A +++G LA TGG + WD ++G + G L
Sbjct: 354 QEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE-----GHL 406
Query: 432 DSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
IY +++ G + T D T K+W
Sbjct: 407 KE---IYGINFSPNGYHIATGSGDNTCKVW 433
>ASPGD|ASPL0000061266 [details] [associations]
symbol:AN10017 species:162425 "Emericella nidulans"
[GO:2000158 "positive regulation of ubiquitin-specific protease
activity" evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell
division site" evidence=IEA] [GO:0051285 "cell cortex of cell tip"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
OMA:MTLATIR InterPro:IPR021772 Pfam:PF11816
EnsemblFungi:CADANIAT00002634 Uniprot:C8VQL1
Length = 1010
Score = 240 (89.5 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 70/265 (26%), Positives = 114/265 (43%)
Query: 164 PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGT-LKLTLTGHIEQVR 221
P K + H WV + +N+ T S+D T+++W ++ T + + H + V+
Sbjct: 70 PTKFRNQVQAHTHWVNDIVLTQNNSALVTASSDTTVRLWRPHSESTDVPEPIGKHTDYVK 129
Query: 222 GLAVSSKH-TYMFSAGDDKQVKCWDLEQNKVIRSY------HGHLSGVYCLGLHPTIDIL 274
LA H T++ S G D +V WDL N I S VY LG ++
Sbjct: 130 ALASPGSHSTWVASGGLDHKVNLWDLNGNGQILSIGASGAERSAKGSVYALGA--VSSVI 187
Query: 275 LTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGK 334
+GG + + RVWD ++ I GH + + + ++T S D T+K W L G+
Sbjct: 188 ASGGPEKLVRVWDPKSGKLITKFVGHTDNIRDILINSDGDTIMTASSDQTVKIWSLTAGR 247
Query: 335 TMLTLTHHKKSVRAM-ALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAV 393
M TLT H SV ++ + HP F S+ + + K + N+ ++ I +
Sbjct: 248 CMHTLTMHNDSVWSLYSNHPNLSVFYSSDRSGL----VAKTD-TRNVSDIEQGICVAALQ 302
Query: 394 NEEGVLATGGDNGSLWFWDWKSGHN 418
EGV+ +W KS N
Sbjct: 303 EHEGVVKVVAAGDYIWTATPKSSIN 327
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 235 (87.8 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
+V+ D + + +AD ++K+W + + GH +V + ++ + D+
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 344
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+ WDLE + I GH GVY + H + TGG D+ RVWD+RT I L G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H + + P + TGS D+T K WDLR + + T+ H+ V + P F
Sbjct: 405 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFL 464
Query: 360 SASA-ENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFW 411
A +N K G L+ + + + ++ +G ++AT + + W
Sbjct: 465 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 208 (78.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 53/199 (26%), Positives = 85/199 (42%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I GH V V + S + T DR+ ++WD+ L GH V +A +
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 377
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ G D + WDL + I GHL +Y + P + TG D+ C+VWD+R
Sbjct: 378 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQ 437
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ ++ + H N V V P ++TG++D+T K W + TL H+ V +
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 350 ALHPTEDCFASASAENIKK 368
+ A+ S + K
Sbjct: 498 DISSDGQLIATCSYDRTFK 516
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 28/122 (22%), Positives = 49/122 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GHL + + F + TGS D T K+WD+ + T+ H V G+
Sbjct: 397 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 456
Query: 226 SSKH-TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
H ++ + D K W +++ GH V L + ++ T D +
Sbjct: 457 EPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 516
Query: 285 VW 286
+W
Sbjct: 517 LW 518
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 60/297 (20%), Positives = 119/297 (40%)
Query: 184 DHSNTWFCTG-SADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVK 242
++ TW+ G ++ + ++W +A +L + +E+ R H + Q++
Sbjct: 160 EYQQTWYHEGPNSLKVARLW-IANYSLPRAMK-RLEEAR------LHKEIPETTRTSQMQ 211
Query: 243 CWDLEQNKVIRSYHGHLSGV-------YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIF 295
E +K +RS + S + YC P +L T +C++W + +
Sbjct: 212 ----ELHKSLRSLNNFCSQIGDDRPISYC-HFSPNSKMLATACWSGLCKLWSVPDCSLLH 266
Query: 296 ALAGHDNTVCSVFTRPT--------DPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
L GH+ V ++ P D + + + D ++K W L + + + H V
Sbjct: 267 TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 326
Query: 348 AMALHPTEDCFASASAENI-KKFNLP-KGEFLHNMLSQQKTIINSMAVNEEGVLA-TGGD 404
+ HP+ + + + ++L + E LH + +A +++G LA TGG
Sbjct: 327 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGL 384
Query: 405 NGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ WD ++G + G L IY +++ G + T D T K+W
Sbjct: 385 DAFGRVWDLRTGRCIMFLE-----GHLKE---IYGINFSPNGYHIATGSGDNTCKVW 433
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 235 (87.8 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
+V+ D + + +AD ++K+W + + GH +V + ++ + D+
Sbjct: 301 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 360
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+ WDLE + I GH GVY + H + TGG D+ RVWD+RT I L G
Sbjct: 361 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 420
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H + + P + TGS D+T K WDLR + + T+ H+ V + P F
Sbjct: 421 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 480
Query: 360 SASA-ENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFW 411
A +N K G L+ + + + ++ +G ++AT + + W
Sbjct: 481 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 208 (78.3 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 53/199 (26%), Positives = 85/199 (42%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I GH V V + S + T DR+ ++WD+ L GH V +A +
Sbjct: 334 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 393
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ G D + WDL + I GHL +Y + P + TG D+ C+VWD+R
Sbjct: 394 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQ 453
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ ++ + H N V V P ++TG++D+T K W + TL H+ V +
Sbjct: 454 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 513
Query: 350 ALHPTEDCFASASAENIKK 368
+ A+ S + K
Sbjct: 514 DISSDGQLIATCSYDRTFK 532
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 28/122 (22%), Positives = 49/122 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GHL + + F + TGS D T K+WD+ + T+ H V G+
Sbjct: 413 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 472
Query: 226 SSKH-TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
H ++ + D K W +++ GH V L + ++ T D +
Sbjct: 473 EPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 532
Query: 285 VW 286
+W
Sbjct: 533 LW 534
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 60/297 (20%), Positives = 119/297 (40%)
Query: 184 DHSNTWFCTG-SADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVK 242
++ TW+ G ++ + ++W +A +L + +E+ R H + Q++
Sbjct: 176 EYQQTWYHEGPNSLKVARLW-IANYSLPRAMK-RLEEAR------LHKEIPETTRTSQMQ 227
Query: 243 CWDLEQNKVIRSYHGHLSGV-------YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIF 295
E +K +RS + S + YC P +L T +C++W + +
Sbjct: 228 ----ELHKSLRSLNNFCSQIGDDRPISYC-HFSPNSKMLATACWSGLCKLWSVPDCNLLH 282
Query: 296 ALAGHDNTVCSVFTRPT--------DPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
L GH+ V ++ P D + + + D ++K W L + + + H V
Sbjct: 283 TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 342
Query: 348 AMALHPTEDCFASASAENI-KKFNLP-KGEFLHNMLSQQKTIINSMAVNEEGVLA-TGGD 404
+ HP+ + + + ++L + E LH + +A +++G LA TGG
Sbjct: 343 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGL 400
Query: 405 NGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ WD ++G + G L IY +++ G + T D T K+W
Sbjct: 401 DAFGRVWDLRTGRCIMFLE-----GHLKE---IYGINFSPNGYHIATGSGDNTCKVW 449
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 235 (87.8 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
+V+ D + + +AD ++K+W + + GH +V + ++ + D+
Sbjct: 303 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 362
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+ WDLE + I GH GVY + H + TGG D+ RVWD+RT I L G
Sbjct: 363 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 422
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H + + P + TGS D+T K WDLR + + T+ H+ V + P F
Sbjct: 423 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 482
Query: 360 SASA-ENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFW 411
A +N K G L+ + + + ++ +G ++AT + + W
Sbjct: 483 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 208 (78.3 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 53/199 (26%), Positives = 85/199 (42%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I GH V V + S + T DR+ ++WD+ L GH V +A +
Sbjct: 336 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 395
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ G D + WDL + I GHL +Y + P + TG D+ C+VWD+R
Sbjct: 396 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQ 455
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ ++ + H N V V P ++TG++D+T K W + TL H+ V +
Sbjct: 456 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 515
Query: 350 ALHPTEDCFASASAENIKK 368
+ A+ S + K
Sbjct: 516 DISSDGQLIATCSYDRTFK 534
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 28/122 (22%), Positives = 49/122 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GHL + + F + TGS D T K+WD+ + T+ H V G+
Sbjct: 415 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 474
Query: 226 SSKH-TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
H ++ + D K W +++ GH V L + ++ T D +
Sbjct: 475 EPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 534
Query: 285 VW 286
+W
Sbjct: 535 LW 536
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 60/297 (20%), Positives = 119/297 (40%)
Query: 184 DHSNTWFCTG-SADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVK 242
++ TW+ G ++ + ++W +A +L + +E+ R H + Q++
Sbjct: 178 EYQQTWYHEGPNSLKVARLW-IANYSLPRAMK-RLEEAR------LHKEIPETTRTSQMQ 229
Query: 243 CWDLEQNKVIRSYHGHLSGV-------YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIF 295
E +K +RS + S + YC P +L T +C++W + +
Sbjct: 230 ----ELHKSLRSLNNFCSQIGDDRPISYC-HFSPNSKMLATACWSGLCKLWSVPDCNLLH 284
Query: 296 ALAGHDNTVCSVFTRPT--------DPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
L GH+ V ++ P D + + + D ++K W L + + + H V
Sbjct: 285 TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 344
Query: 348 AMALHPTEDCFASASAENI-KKFNLP-KGEFLHNMLSQQKTIINSMAVNEEGVLA-TGGD 404
+ HP+ + + + ++L + E LH + +A +++G LA TGG
Sbjct: 345 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGL 402
Query: 405 NGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ WD ++G + G L IY +++ G + T D T K+W
Sbjct: 403 DAFGRVWDLRTGRCIMFLE-----GHLKE---IYGINFSPNGYHIATGSGDNTCKVW 451
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 239 (89.2 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 127 DWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDK 186
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C+ HP + I++T
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIIT 246
Query: 277 GGRDSVCRVWDIRT 290
G D R+W T
Sbjct: 247 GSEDGTVRIWHSST 260
Score = 212 (79.7 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWD-VAKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 94 MFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPK 153
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 154 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKI 213
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
WD + K + L GH V V P P ++TGS D T++ W
Sbjct: 214 WDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIW 256
Score = 184 (69.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 53/241 (21%), Positives = 98/241 (40%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+SV S W + ++ +W+ TL T VR ++ ++ + D
Sbjct: 18 VKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARKNWVITGAD 77
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QI 294
D Q++ ++ + + + H + C+ +HPT +LT D + ++WD K Q+
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQV 137
Query: 295 FALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
F GH + V + P D Q + S D TIK W L TL H K V + +
Sbjct: 138 FE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYS 195
Query: 354 TED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWF 410
D + A +K ++ + + + + E ++ TG ++G++
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRI 255
Query: 411 W 411
W
Sbjct: 256 W 256
Score = 148 (57.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 57/274 (20%), Positives = 116/274 (42%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K LT ++V+ + + +M ++ + V W+ E +++++ V
Sbjct: 7 IKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFV 66
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++TG D RV++ T ++ H + + + PT P ++T S D IK W
Sbjct: 67 ARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLW 126
Query: 329 DL-RYGKTMLTLTHHKKSVRAMALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQK 385
D + H V + ++P ++ FASAS + IK + L + K
Sbjct: 127 DWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDK 186
Query: 386 TI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSY 442
+ I+ + ++ L +G D+ + WD+ Q +T VQ +L+ A + +++
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDY-------QNKTCVQ--TLEGHAQNVSCVNF 237
Query: 443 DVTGSRLVTCEADKTIKMWREDETATPETHPLNF 476
++T D T+++W T LN+
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLEST--LNY 269
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 224 (83.9 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 68/308 (22%), Positives = 129/308 (41%)
Query: 173 GHLGWVRSVAFDHSNT-WFCTGSADRTIKIWDVAK------GTLKLTLTGHIEQVRGLAV 225
GH GWV +A + + + S D+T+ +W + + G + L GH + + +
Sbjct: 13 GHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVL 72
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
SS Y S D+ ++ WDL K R + GH V + +++G RD ++
Sbjct: 73 SSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKL 132
Query: 286 WDIRTKMQIFALA--GHDNTVCSVFTRP--TDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
W+ + + F + GH + V V P ++P +V+ D T+K W+L K
Sbjct: 133 WNTLAECK-FTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHG 191
Query: 342 HKKSVRAMALHPTED-CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H + + + P C + ++L G+ L+ + + IIN++ +
Sbjct: 192 HNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTL--EHNDIINALCFSPNRYWL 249
Query: 401 TGGDNGSLWFWDWKSGHNFQQAQT-IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIK 459
S+ WD ++ + +V P S + +L++ G L +D TI+
Sbjct: 250 CVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIR 309
Query: 460 MWREDETA 467
+W+ +A
Sbjct: 310 VWQVSVSA 317
Score = 207 (77.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 62/207 (29%), Positives = 98/207 (47%)
Query: 161 WH-APWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWD-VAKGTLKLTLTGHIE 218
W A K R GH V SVAF N +GS D+TIK+W+ +A+ + GH +
Sbjct: 91 WDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTD 150
Query: 219 QVRGLAVSSKHT--YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S H+ + S G D+ VK W+L K+ ++HGH + + + P + +
Sbjct: 151 WVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTS 210
Query: 277 GGRDSVCRVWDIRTKMQIFALAGHD--NTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGK 334
GG+DS +WD+ ++ L +D N +C F+ P + ++ +IK WDL K
Sbjct: 211 GGKDSKALLWDLNDGKNLYTLEHNDIINALC--FS-PNRYWLCV-AYGPSIKIWDLACKK 266
Query: 335 TMLTLTHHKKSVRAMALHPTEDCFASA 361
T+ L S + A P C + A
Sbjct: 267 TVEELRPEVVSPTSKADQP--QCLSLA 291
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 230 (86.0 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 80/286 (27%), Positives = 125/286 (43%)
Query: 144 STSAIMERIPSKWPR-PEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIW 202
ST A+++ P PR AP ++SGH G V F + DR I +W
Sbjct: 67 STGALLQSGP---PRCSSLQAP---IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLW 120
Query: 203 DVAKGTLKL-TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
+V TL GH V L ++ + +FSA DK V WD E + ++ GH S
Sbjct: 121 NVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF 180
Query: 262 VY-CLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNT--VCSVFTRPTDPQVVT 318
V C ++ TG D ++WDIR K A+ NT V +V T Q+++
Sbjct: 181 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA---AVQTFQNTYQVLAVTFNDTSDQIIS 237
Query: 319 GSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNL----PK 373
G D+ IK WDLR K T+ H SV ++L S + +N ++ +++ PK
Sbjct: 238 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPK 297
Query: 374 GE----FLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKS 415
F N+ + +K ++ + +A G + ++ WD S
Sbjct: 298 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTS 343
Score = 224 (83.9 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 63/205 (30%), Positives = 91/205 (44%)
Query: 171 ISGHLGWVRSV-AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
+ GH +V S CTGS D T+K+WD+ K T + QV + +
Sbjct: 174 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTS 232
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S G D +K WDL QNK+ + GH V L L LL+ D+ R+WD+R
Sbjct: 233 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVR 292
Query: 290 T---K---MQIFALAGHD---NTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
K ++IF H+ N + CS P ++ GS D + WD + + L
Sbjct: 293 PFAPKERCVKIFQGNVHNFEKNLLRCS--WSPDGSKIAGGSADRFVYVWDTTSRRILYKL 350
Query: 340 THHKKSVRAMALHPTEDCFASASAE 364
H SV +A HP E SAS++
Sbjct: 351 PGHAGSVNELAFHPEEPIILSASSD 375
Score = 200 (75.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 65/258 (25%), Positives = 116/258 (44%)
Query: 211 LTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHP 269
+ L+GH +V + SAG D+ + W++ + + GH V + LH
Sbjct: 87 MLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV--MELHY 144
Query: 270 TID--ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIK 326
D +L + D VWD T ++ L GH + V S + PQ+V TGS D T+K
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 204
Query: 327 FWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
WD+R + T + V A+ + T D S +N IK ++L + + + M
Sbjct: 205 LWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 263
Query: 386 TIINSMAVNEEG--VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
++ ++++ EG +L+ DN ++ WD + ++ I Q + E + S+
Sbjct: 264 SV-TGLSLSSEGSYLLSNAMDN-TVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 321
Query: 444 VTGSRLVTCEADKTIKMW 461
GS++ AD+ + +W
Sbjct: 322 PDGSKIAGGSADRFVYVW 339
Score = 180 (68.4 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 40/163 (24%), Positives = 80/163 (49%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V +V F+ ++ +G D IK+WD+ + L T+ GH + V GL++SS+ +Y+ S
Sbjct: 223 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 282
Query: 238 DKQVKCWDLE----QNKVIRSYHGHLSG-----VYCLGLHPTIDILLTGGRDSVCRVWDI 288
D V+ WD+ + + ++ + G++ + C P + G D VWD
Sbjct: 283 DNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSKIAGGSADRFVYVWDT 341
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
++ ++ L GH +V + P +P +++ S D + +++
Sbjct: 342 TSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ 384
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 244 (91.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 51/153 (33%), Positives = 76/153 (49%)
Query: 179 RSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDD 238
+ +AF S W TI++WD GTL H VRGL SAGDD
Sbjct: 15 KGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDD 74
Query: 239 KQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALA 298
+K W L+ NK + + GHL V + H + +++ D R+W+ + + +I L
Sbjct: 75 YTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLT 134
Query: 299 GHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDL 330
GH++ V C+ F PTD +V+ S D TI+ WD+
Sbjct: 135 GHNHFVMCAQF-HPTDDLIVSASLDETIRIWDI 166
Score = 200 (75.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 59/234 (25%), Positives = 98/234 (41%)
Query: 219 QVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG 278
+ +G+A ++ A ++ WD ++ + H V L HPT I ++ G
Sbjct: 13 RAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAG 72
Query: 279 RDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLT 338
D +VW + T ++ L GH + V +VF P +++ S D TI+ W+ + K +
Sbjct: 73 DDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIAC 132
Query: 339 LTHHKKSVRAMALHPTEDCFASASA-ENI---------KKFNLP-KGEFLHNMLSQQKTI 387
LT H V HPT+D SAS E I K+ + P F M +QQ +
Sbjct: 133 LTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLL 192
Query: 388 INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
S+ + G G +W S F ++ GS D + ++ +S
Sbjct: 193 DGSLGDCVVKFILEGHTRGV----NWAS---FHPTLPLIVSGSDDRQVKLWRMS 239
Score = 198 (74.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 61/245 (24%), Positives = 104/245 (42%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H G VR + F + F + D TIK+W + TLTGH++ VR + + ++
Sbjct: 52 HEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWII 111
Query: 234 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ 293
SA DD+ ++ W+ + K I GH V C HPT D++++ D R+WDI +
Sbjct: 112 SASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRK 171
Query: 294 IFALAGHDNTVCSVFTRPTDPQ--VVTGS-HDSTIKFWDLRYGKTMLTLTHHKKSVRAMA 350
+ G S F Q ++ GS D +KF L H + V +
Sbjct: 172 RHSAPG-----TSSFEEQMSAQQNLLDGSLGDCVVKF----------ILEGHTRGVNWAS 216
Query: 351 LHPTEDCFASASAEN-IK--KFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGS 407
HPT S S + +K + + K + + + + + ++ + G++ +
Sbjct: 217 FHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKT 276
Query: 408 LWFWD 412
L WD
Sbjct: 277 LRVWD 281
Score = 167 (63.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 57/211 (27%), Positives = 88/211 (41%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
KC ++GHL +VR+V F W + S D+TI+IW+ LTGH V
Sbjct: 86 KCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQF 145
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
+ SA D+ ++ WD+ + S G S + LL G +
Sbjct: 146 HPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQN---LLDGS------L 196
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKT--MLTLTHHK 343
D K F L GH V PT P +V+GS D +K W + K + T H
Sbjct: 197 GDCVVK---FILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHT 253
Query: 344 KSVRAMALHPTEDCFASASAEN-IKKFNLPK 373
+V ++ HP ++ S + ++ ++L K
Sbjct: 254 NNVDSVIFHPHQNLIISVGEDKTLRVWDLDK 284
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/217 (25%), Positives = 91/217 (41%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH +V F ++ + S D TI+IWD++ G K +S++
Sbjct: 133 LTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDIS-GLRKRHSAPGTSSFEE-QMSAQQN 190
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR- 289
+ + D VK + LE GH GV HPT+ ++++G D ++W +
Sbjct: 191 LLDGSLGDCVVK-FILE---------GHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSA 240
Query: 290 TKM-QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
TK ++ GH N V SV P +++ D T++ WDL +
Sbjct: 241 TKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWL 300
Query: 349 MALHPTEDCFASASAENIKKFNLPKGE---FLH-NML 381
+A HP + F +A I F L + F+H N L
Sbjct: 301 IAAHPHINLFGAAHDSGIMVFKLDRERPCSFIHQNQL 337
Score = 42 (19.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 436 GIYALSYDVTGSRLVTCEADKTIKMWREDET 466
G+ S+ T +V+ D+ +K+WR T
Sbjct: 211 GVNWASFHPTLPLIVSGSDDRQVKLWRMSAT 241
Score = 38 (18.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 449 LVTCEADKTIKMWREDETATP 469
+++ DKT+++W D+ TP
Sbjct: 268 IISVGEDKTLRVWDLDKR-TP 287
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 212 (79.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 52/197 (26%), Positives = 84/197 (42%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R ++GH G++ F N T S D T +WD+ G T TGH V L+++
Sbjct: 37 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 95
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
S D K WD+ + +++ GH S + + P + TG D+ CR++D+
Sbjct: 96 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 155
Query: 289 RTKMQIFALAGHDNTVC---SVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
R ++ + HDN +C SV + ++ G D WD L H
Sbjct: 156 RADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR 214
Query: 346 VRAMALHPTEDCFASAS 362
V + + T+D A A+
Sbjct: 215 VSCLGV--TDDGMAVAT 229
Score = 206 (77.6 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 47/160 (29%), Positives = 75/160 (46%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY 231
+GH G V S++ F +G+ D + K+WDV +G + T TGH + +
Sbjct: 81 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 140
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSY-HGHL-SGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ DD + +DL ++ + +Y H ++ G+ + + +LL G D C VWD
Sbjct: 141 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 200
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWD 329
+ LAGHDN V + V TGS DS +K W+
Sbjct: 201 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 159 (61.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 49/200 (24%), Positives = 96/200 (48%)
Query: 269 PTIDILLTGGRDSVCRVWDIRTK---MQIFA-LAGHDNTV-CSVFTRPTDPQVVTGSHDS 323
P+ + + GG D++C +++++T+ +++ LAGH + C F D Q+VT S D+
Sbjct: 7 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDT 64
Query: 324 TIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLS 382
T WD+ G+ T T H V +++L P F S + + + K +++ +G +
Sbjct: 65 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-MCRQTFT 123
Query: 383 QQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
++ IN++ G ATG D+ + +D ++ Q+ T + GI ++S
Sbjct: 124 GHESDINAICFFPNGNAFATGSDDATCRLFDLRAD---QELMTYSHDNII---CGITSVS 177
Query: 442 YDVTGSRLVTCEADKTIKMW 461
+ +G L+ D +W
Sbjct: 178 FSKSGRLLLAGYDDFNCNVW 197
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL-AV 225
C + +GH + ++ F + F TGS D T +++D+ + +L H + G+ +V
Sbjct: 118 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL-RADQELMTYSHDNIICGITSV 176
Query: 226 S-SKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
S SK + AG DD WD + GH + V CLG+ + TG DS
Sbjct: 177 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 236
Query: 284 RVWD 287
++W+
Sbjct: 237 KIWN 240
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
+V+ D + + +AD ++K+W + + GH +V + ++ + D+
Sbjct: 286 TVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 345
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+ WDLE + I GH GVY + H + TGG D+ RVWD+RT I L G
Sbjct: 346 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 405
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H + + P + TGS D+T K WDLR + + T+ H+ V + P F
Sbjct: 406 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 465
Query: 360 SASA-ENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFW 411
A +N K G L+ + + + ++ +G ++AT + + W
Sbjct: 466 LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 208 (78.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 53/199 (26%), Positives = 85/199 (42%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I GH V V + S + T DR+ ++WD+ L GH V +A +
Sbjct: 319 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 378
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ G D + WDL + I GHL +Y + P + TG D+ C+VWD+R
Sbjct: 379 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQ 438
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ ++ + H N V V P ++TG++D+T K W + TL H+ V +
Sbjct: 439 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 498
Query: 350 ALHPTEDCFASASAENIKK 368
+ A+ S + K
Sbjct: 499 DISSDGQLIATCSYDRTFK 517
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 62/297 (20%), Positives = 121/297 (40%)
Query: 184 DHSNTWFCTG-SADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVK 242
++ TW+ G ++ + ++W +A +L + +E+ R H + Q++
Sbjct: 161 EYQQTWYHEGPNSLKVARLW-IANYSLPRAMK-RLEEAR------LHKEIPETTRTSQMQ 212
Query: 243 CWDLEQNKVIRSYHGHLSGV-------YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIF 295
E +K +RS + S + YC P +L T +C++W + +
Sbjct: 213 ----ELHKSLRSLNNFCSQIGDDRPISYC-HFSPNSKMLATACWSGLCKLWSVPDCNLLH 267
Query: 296 ALAGHDNTVCSVFTRPT-----DPQVV---TGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
L GH+ V ++ P DP+ V + + D ++K W L + + + H V
Sbjct: 268 TLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 327
Query: 348 AMALHPTEDCFASASAENI-KKFNLP-KGEFLHNMLSQQKTIINSMAVNEEGVLA-TGGD 404
+ HP+ + + + ++L + E LH + +A +++G LA TGG
Sbjct: 328 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGL 385
Query: 405 NGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ WD ++G + G L IY +++ G + T D T K+W
Sbjct: 386 DAFGRVWDLRTGRCIMFLE-----GHLKE---IYGINFSPNGYHIATGSGDNTCKVW 434
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 28/122 (22%), Positives = 49/122 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GHL + + F + TGS D T K+WD+ + T+ H V G+
Sbjct: 398 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 457
Query: 226 SSKH-TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
H ++ + D K W +++ GH V L + ++ T D +
Sbjct: 458 EPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 517
Query: 285 VW 286
+W
Sbjct: 518 LW 519
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 73/337 (21%), Positives = 147/337 (43%)
Query: 153 PSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT 212
P P+PE ++ ++ GHL V +V F + +G AD +K+W + G L T
Sbjct: 155 PPPPPKPE-SVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYT 213
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRS-YHGHLSGVYCLGLHPTI 271
GH+ + ++ S + S DDK ++ W++ K + + GH + VY + P
Sbjct: 214 FEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKG 273
Query: 272 DILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
++L++G D +WD+R+ + +L H + V + + + + D ++ WD
Sbjct: 274 NMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTS 333
Query: 332 YGKTMLTLTHHKKS-VRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNML--SQQK-T 386
G+ + TL H V ++ P + + ++ ++ ++ +G L S +K +
Sbjct: 334 TGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYS 393
Query: 387 IINSMAVNEEGV---------LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGI 437
+ + V + + +G ++G++ WD + Q+ + G + G+
Sbjct: 394 LSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEA--HDGVV---LGV 448
Query: 438 YALSYDVTGSRLVTCEADKTIKMWRE-DETATPETHP 473
S G +V+C D T+++W E PE P
Sbjct: 449 DTCSTG-EGRFMVSCGLDGTVRVWEEVGPEREPEPEP 484
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 232 (86.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 56/190 (29%), Positives = 85/190 (44%)
Query: 180 SVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDK 239
+V+ D + + +AD ++K+W + + GH +V + ++ + D
Sbjct: 285 TVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDH 344
Query: 240 QVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAG 299
+ WDLE + I GH GVY + H + TGG D+ RVWD+RT I L G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFA 359
H + + P V TGS D+T K WDLR K + T+ H+ V + P F
Sbjct: 405 HLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFL 464
Query: 360 SASA-ENIKK 368
A +N K
Sbjct: 465 LTGAYDNTAK 474
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 54/199 (27%), Positives = 86/199 (43%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I GH V V + S + T D + ++WD+ L GH + V +A + +
Sbjct: 318 IEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGS 377
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ G D + WDL + I GHL +Y L P + TG D+ C+VWD+R
Sbjct: 378 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQ 437
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
+ I+ + H N V V P ++TG++D+T K W + TL H+ V +
Sbjct: 438 RKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 350 ALHPTEDCFASASAENIKK 368
+ A+ S + K
Sbjct: 498 DISLDGQLIATCSYDRTFK 516
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYM 232
GH V +AF + TG D ++WD+ G + L GH++++ GL S ++
Sbjct: 362 GHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHV 421
Query: 233 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI-DILLTGGRDSVCRVWDIRTK 291
+ D K WDL Q K I + H + V + P + LLTG D+ ++W
Sbjct: 422 ATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGW 481
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ LAGH+ V + + T S+D T K W
Sbjct: 482 SPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 45/209 (21%), Positives = 84/209 (40%)
Query: 263 YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPT--------DP 314
YC P +L T +C++W + + L GH V ++ P D
Sbjct: 235 YC-HFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDV 293
Query: 315 QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KKFNLPK 373
+ + + D ++K W L + + + H V + HP+ + ++ + ++L
Sbjct: 294 NLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEA 353
Query: 374 GEFLHNMLSQQKTIINSMAVNEEGVLA-TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLD 432
E + + K + + +A + +G LA TGG + WD ++G + G L
Sbjct: 354 QEEILHQEGHSKGVYD-IAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLE-----GHLK 407
Query: 433 SEAGIYALSYDVTGSRLVTCEADKTIKMW 461
IY L++ G + T D T K+W
Sbjct: 408 E---IYGLNFSPNGYHVATGSGDNTCKVW 433
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GHL + + F + TGS D T K+WD+ + T+ H V G+
Sbjct: 397 RCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKF 456
Query: 226 SSKH-TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSV 282
H ++ + D K W +++ GH V +GL ++D ++ T D
Sbjct: 457 EPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKV--MGLDISLDGQLIATCSYDRT 514
Query: 283 CRVW 286
++W
Sbjct: 515 FKLW 518
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 49/232 (21%), Positives = 93/232 (40%)
Query: 242 KCWDLEQNKVIRSYHGHLSGVYCLGLHP--TIDI------LLTGGRDSVCRVWDIRTKMQ 293
K W + ++ + GH + V + HP T+ + L + D ++W + +
Sbjct: 255 KLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEP 314
Query: 294 IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
+ + GH V V P+ + T +D + + WDL + +L H K V +A H
Sbjct: 315 VADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFH- 373
Query: 354 TEDCFASASAENI--KKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWF 410
T+ A + + ++L G + + K I + + G +ATG + +
Sbjct: 374 TDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG-LNFSPNGYHVATGSGDNTCKV 432
Query: 411 WDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT-GSRLVTCEADKTIKMW 461
WD + Q+ P + G+ ++ G+ L+T D T K+W
Sbjct: 433 WDLR-----QRKCIYTIPAHQNLVTGV---KFEPNHGNFLLTGAYDNTAKIW 476
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 231 (86.4 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 52/252 (20%), Positives = 112/252 (44%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVR 221
HA + YR + GH V S+ F + S D+T+++W + + H VR
Sbjct: 50 HA--RAYRYV-GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVR 106
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDS 281
+ S+ ++ +A +DK +K W + + + + S + H V C P ++++ D
Sbjct: 107 SVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 282 VCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
++WD +K + + V P + + D ++ WD+R + +
Sbjct: 167 TIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQV 226
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H V ++ HP+ + +AS++ +K +L +G ++ + + +++ +++G L
Sbjct: 227 HSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVF-TVSFSKDGELF 285
Query: 401 T-GGDNGSLWFW 411
T GG + + W
Sbjct: 286 TSGGADAQVLVW 297
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 63/297 (21%), Positives = 116/297 (39%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + S F + T S D + +W + GH + V L S +
Sbjct: 12 RYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA DK V+ W L++ + H + V + L+T D +VW +
Sbjct: 72 GNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ +++L H + V C+ F+ P +V+ S D TIK WD + + +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFAN 190
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDN 405
+ P C ASA +++ ++ +++ L + +N ++ + G L T +
Sbjct: 191 FVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHY-QVHSCGVNCLSFHPSGNSLVTASSD 249
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
G++ D G Q P ++ +S+ G + AD + +WR
Sbjct: 250 GTVKILDLVEGRLIYTLQGHTGP--------VFTVSFSKDGELFTSGGADAQVLVWR 298
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 231 (86.4 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 54/248 (21%), Positives = 110/248 (44%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+ +R + GH V SV F + S DRT+++W K H VR +
Sbjct: 52 RAFRYV-GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDF 110
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRV 285
S+ ++ +A +DK +K W++ + + + S + H V C P ++++ D ++
Sbjct: 111 SADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD K + + V P + + D T+K WD+R K + H
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG 230
Query: 346 VRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL-ATGG 403
V ++ HP+ + +AS++ +K +L +G ++ + + +++ ++ G L ++GG
Sbjct: 231 VNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGGELFSSGG 289
Query: 404 DNGSLWFW 411
+ + W
Sbjct: 290 ADTQVLLW 297
Score = 215 (80.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 56/223 (25%), Positives = 94/223 (42%)
Query: 142 NLSTSAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKI 201
NL SA +R W P+ ++ H VRSV F + T S D++IK+
Sbjct: 73 NLLASASRDRTVRLWI-PDKRGKSSEFKA---HTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 202 WDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG 261
W++ + +L H VR S + S +DK +K WD + + ++ +
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ +P + + G D ++WDIR + H V V P+ ++T S
Sbjct: 189 ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASS 248
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
D T+K DL G+ + TL H V ++ + F+S A+
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGAD 291
Score = 189 (71.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 63/297 (21%), Positives = 117/297 (39%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R GH + SV F S T S D + +W+ GH + V + S
Sbjct: 12 RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPL 71
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA D+ V+ W ++ + H + V + L T D +VW++
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 289 RTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ +++L H + V C+ F+ P +V+ S D TIK WD + + +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 348 AMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDN 405
+ +P C ASA +++ +K +++ + L + + N ++ + G + T +
Sbjct: 191 FVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGV-NCVSFHPSGNYIITASSD 249
Query: 406 GSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWR 462
G+L D G Q P ++ +S+ G + AD + +WR
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGP--------VFTVSFSKGGELFSSGGADTQVLLWR 298
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 232 (86.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 50/197 (25%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V +F + + S D T+++W + T + GH V S
Sbjct: 297 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 356
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S G D+ + W + + +R + GHL+ V C HP + + TG D R+WD+
Sbjct: 357 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 416
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH + S+ P + TG+ D + WD+ +G + L H +V +
Sbjct: 417 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 476
Query: 349 MALHPTEDCFASASAEN 365
+ + AS S +N
Sbjct: 477 LRFSRDGEILASGSMDN 493
Score = 210 (79.0 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 58/209 (27%), Positives = 98/209 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK+ L GH V G + S Y+ S+ +D V+ W L+ + Y GH V+
Sbjct: 296 LKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 354
Query: 269 PTIDILLTGGRDSVCRVW--DIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTI 325
P ++GG D V R+W D ++IFA GH V C+ F P V TGS D T+
Sbjct: 355 PYGYYFVSGGHDRVARLWATDHYQPLRIFA--GHLADVNCTRF-HPNSNYVATGSADRTV 411
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
+ WD+ G + T HK + ++ P A+ + + + +++ G + +
Sbjct: 412 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 471
Query: 385 KTIINSMAVNEEG-VLATGGDNGSLWFWD 412
T+ S+ + +G +LA+G + ++ WD
Sbjct: 472 DTVC-SLRFSRDGEILASGSMDNTVRLWD 499
Score = 195 (73.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 46/165 (27%), Positives = 73/165 (44%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C GH V F +F +G DR ++W GH+ V
Sbjct: 337 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 396
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
Y+ + D+ V+ WD+ +R + GH ++ L P L TG D +W
Sbjct: 397 PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 456
Query: 287 DIRTKMQIFALAGHDNTVCSV-FTRPTDPQVV-TGSHDSTIKFWD 329
DI + + L GH +TVCS+ F+R D +++ +GS D+T++ WD
Sbjct: 457 DIGHGLMVGELKGHTDTVCSLRFSR--DGEILASGSMDNTVRLWD 499
Score = 190 (71.9 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 58/257 (22%), Positives = 107/257 (41%)
Query: 164 PWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
P C Y ++ + + +V ++ G AD T+++W V L+ ++Q
Sbjct: 218 PSICFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQAAD 272
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
L++ K + DD + D + ++ +GH VY P + LL+ D
Sbjct: 273 LSLIDKES------DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 326
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+W ++T + GH+ V P V+G HD + W + + + H
Sbjct: 327 VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 386
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V HP + A+ SA+ ++ +++ G + + + K I+S+ + G LA
Sbjct: 387 LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPNGRFLA 445
Query: 401 TGGDNGSLWFWDWKSGH 417
TG +G + WD GH
Sbjct: 446 TGATDGRVLLWD--IGH 460
Score = 185 (70.2 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 53/246 (21%), Positives = 103/246 (41%)
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
+++R + ++ + + DD + D + ++ +GH VY P + LL+
Sbjct: 262 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 321
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D R+W ++T + GH+ V P V+G HD + W + + +
Sbjct: 322 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 381
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V HP + A+ SA+ ++ +++ G + + + K I+S+ +
Sbjct: 382 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 440
Query: 397 G-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
G LATG +G + WD GH + G D+ + +L + G L + D
Sbjct: 441 GRFLATGATDGRVLLWD--IGHGLMVGEL---KGHTDT---VCSLRFSRDGEILASGSMD 492
Query: 456 KTIKMW 461
T+++W
Sbjct: 493 NTVRLW 498
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 214 (80.4 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 56/197 (28%), Positives = 89/197 (45%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ H VR VAF +++ F T S D ++K+W+ T +L LTGH V+ +
Sbjct: 158 KIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPS 217
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI--DILLTGGRDSVCRVW 286
+ S D VK WD I + HGH + + + L T RDS CRV+
Sbjct: 218 KGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVF 277
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVT-GSHDSTIKFWDLRYGKTMLTLTHHKK- 344
D+R + L GH+ V V P P ++T G D ++ + L + +H+K
Sbjct: 278 DLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHYSLDEPPLLSQQKYHEKH 337
Query: 345 -----SVRAMALHPTED 356
S + L+PT +
Sbjct: 338 PNVTLSASSYLLYPTAE 354
Score = 154 (59.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 52/222 (23%), Positives = 93/222 (41%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TGS+ +W+ +L H VR S+ ++ S VK ++ N V
Sbjct: 98 TGSSTGEFTLWNGLTFNFELINQSHDYAVRCAEWSTDGRWLISGDGGGMVKYFEPNLNNV 157
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ H V + P +T D +VW+ + L GH V +V P
Sbjct: 158 -KIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHP 216
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPT--EDCFASASAENI-KK 368
+ + +GS D+ +KFWD R G + TL HK ++ + + A+ S ++ +
Sbjct: 217 SKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRV 276
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNE--EGVLATGGDNGSL 408
F+L + + + +K + N + + +L TGG +GS+
Sbjct: 277 FDLRAMKDVRVLRGHEKDV-NCVTWHPLYPNLLTTGGSDGSV 317
Score = 60 (26.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 434 EAGIYALSYDVTGSRLVTCEADKTIKMWR----EDETATPETHPL 474
+ GI+++ Y G L T DKT + W +D+ +T + H L
Sbjct: 360 DLGIWSMQYHPLGHLLCTGSNDKTTRFWSRSRPDDKESTMDRHHL 404
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 230 (86.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 75/302 (24%), Positives = 131/302 (43%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + I+GH V V+F +GS D T+++WD+ T T GH V +A
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVIRS-YHGH---LSGVYCLGLHPTIDI--LLTGGR 279
S ++ S ++ CW+ ++ ++ S GH ++G+ +H + +T +
Sbjct: 160 SPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSK 219
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D R+WDI K I L+GH V V D + TGS D TIK W+ GK + L
Sbjct: 220 DGDARIWDITLKKSIICLSGHTLAVTCV-KWGGDGIIYTGSQDCTIKMWETTQGKLIREL 278
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVL 399
H + ++AL TE + + ++ + P E L + N + L
Sbjct: 279 KGHGHWINSLALS-TEYVLRTGAFDHTGR-QYPPNEEKQKALERY----NKTKGDSPERL 332
Query: 400 ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIK 459
+G D+ +++ W+ ++ T G +Y S D G + + DK+++
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLT----GHQQLVNHVY-FSPD--GKWIASASFDKSVR 385
Query: 460 MW 461
+W
Sbjct: 386 LW 387
Score = 192 (72.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 192 TGSADRTIKIWD--VAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN 249
+GS D T+ +W+ V+K K LTGH + V + S ++ SA DK V+ W+
Sbjct: 334 SGSDDFTMFLWEPSVSKQPKK-RLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITG 392
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
+ + + GH+ VY + +LL+G +DS ++W+IRTK L GH + V +V
Sbjct: 393 QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDW 452
Query: 310 RPTDPQVVTGSHDSTIKFW 328
P +VV+G D +K W
Sbjct: 453 SPDGEKVVSGGKDRVLKLW 471
Score = 162 (62.1 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 54/235 (22%), Positives = 104/235 (44%)
Query: 249 NKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVF 308
N+ ++ GH V C+ P L +G D+ R+WD+ T+ +F GH N V +V
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVA 158
Query: 309 TRPTDPQVVTGSHDSTIKFWDLRYGKTMLT-LTHHKKSVRAMA---LHPTEDC--FASAS 362
P +V+GS I W+ + G+ + LT HKK + ++ +H + C F ++S
Sbjct: 159 WSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSS 218
Query: 363 AEN---IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNF 419
+ I L K LS + + +G++ TG + ++ W+ G
Sbjct: 219 KDGDARIWDITLKKSIIC---LSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLI 275
Query: 420 QQAQTI---VQPGSLDSEAGIYALSYDVTGSRLVTCEA-DKTIKMWREDETATPE 470
++ + + +L +E + ++D TG + E K ++ + + + +PE
Sbjct: 276 RELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPE 330
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 71/298 (23%), Positives = 127/298 (42%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT-LTGHIEQVRGLA-----VS 226
GH WV +VA+ +GS I W+ KG L+ + LTGH + + G++ +S
Sbjct: 149 GHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLS 208
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
S ++ D + WD+ K I GH V C+ I+ TG +D ++W
Sbjct: 209 SPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGD-GIIYTGSQDCTIKMW 267
Query: 287 DIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHK-KS 345
+ I L GH + + S+ T+ + TG+ D T + + K ++K K
Sbjct: 268 ETTQGKLIRELKGHGHWINSL-ALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKG 326
Query: 346 VRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGG 403
L D F E ++ K PK L+ + ++N + + +G +A+
Sbjct: 327 DSPERLVSGSDDFTMFLWEPSVSK--QPK-----KRLTGHQQLVNHVYFSPDGKWIASAS 379
Query: 404 DNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ S+ W+ +G Q T+ + G + +Y +S+ L++ D T+K+W
Sbjct: 380 FDKSVRLWNGITG----QFVTVFR-GHVGP---VYQVSWSADSRLLLSGSKDSTLKIW 429
Score = 156 (60.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 28/116 (24%), Positives = 56/116 (48%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH V V F W + S D+++++W+ G GH+ V ++ S+
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
+ S D +K W++ K+ + GH V+ + P + +++GG+D V ++W
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 241 (89.9 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 49/170 (28%), Positives = 79/170 (46%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C+ HP + I++T
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIIT 246
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 295
Score = 214 (80.4 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 51/185 (27%), Positives = 83/185 (44%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 94 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 153
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 154 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 213
Query: 286 WDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
WD + K + L GH V V P P ++TGS D T++ W + TL + +
Sbjct: 214 WDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER 273
Query: 346 VRAMA 350
V +A
Sbjct: 274 VWCVA 278
Score = 184 (69.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 52/242 (21%), Positives = 103/242 (42%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+SV + W + ++ +W+ TL T VR ++ ++ + D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QI 294
D Q++ ++ + + + H + C+ +HPT +LT D + ++WD K Q+
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQV 137
Query: 295 FALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
F GH + V + P D Q + S D TIK W L TL H+K V + +
Sbjct: 138 FE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 195
Query: 354 TED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEE-GVLATGGDNGSLW 409
D + A +K ++ + + + + + ++ + E ++ TG ++G++
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNV-SCVSFHPELPIIITGSEDGTVR 254
Query: 410 FW 411
W
Sbjct: 255 IW 256
Score = 150 (57.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 58/274 (21%), Positives = 117/274 (42%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K LT ++V+ + + +M ++ + V W+ E +++++ V
Sbjct: 7 IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 66
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++TG D RV++ T ++ H + + + PT P ++T S D IK W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 329 DL-RYGKTMLTLTHHKKSVRAMALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQK 385
D + H V + ++P ++ FASAS + IK + L + +K
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 386 TI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSY 442
+ I+ + ++ L +G D+ + WD+ Q +T VQ +L+ A + +S+
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDY-------QNKTCVQ--TLEGHAQNVSCVSF 237
Query: 443 DVTGSRLVTCEADKTIKMWREDETATPETHPLNF 476
++T D T+++W T LN+
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLEST--LNY 269
Score = 39 (18.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 389 NSMAVNE--EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
N+ VN+ EG G +N + + + G + +++ G L EA A +Y
Sbjct: 708 NANMVNKLAEGAEKDGKNNVAFMSY-FLQGKLDSCLELLIKTGRLP-EAAFLARTY---- 761
Query: 447 SRLVTCEADKTIKMWRE 463
+ + + +K+WRE
Sbjct: 762 ---LPSQVSRVVKLWRE 775
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 215 (80.7 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 47/198 (23%), Positives = 92/198 (46%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H + ++ + + + W +G + T+K W + ++ H VR +A S
Sbjct: 172 IMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNVN-NISAHANGVRDIAFSPND 230
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ + GDD +K W+ K R+ GH V HP + ++++G +D++ ++WD R
Sbjct: 231 SKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPR 290
Query: 290 TKMQIFALAGHDNTVCSVFTRP--TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ + L G +TV +P T + + S D + + +DLR K ML + + +
Sbjct: 291 SANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSETDLS 350
Query: 348 AMALHPTEDCFASASAEN 365
+A HP + +A N
Sbjct: 351 CVAWHPIHASMVTTAAYN 368
Score = 169 (64.5 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 44/160 (27%), Positives = 67/160 (41%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + IS H VR +AF +++ F T D IKIW+ G + TL+GH +V
Sbjct: 204 WQPNFNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEV 263
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHP--TIDILLTGG 278
+ + S D VK WD + + HG V P T +L +
Sbjct: 264 KSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVS 323
Query: 279 RDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVT 318
RD CR++D+RT + + + + V P +VT
Sbjct: 324 RDRSCRIFDLRTMKDMLVIRDSETDLSCVAWHPIHASMVT 363
Score = 153 (58.9 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 50/213 (23%), Positives = 90/213 (42%)
Query: 201 IWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLS 260
+W+ + + H + + S+ ++ S + VK W N V + H +
Sbjct: 161 LWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNV-NNISAHAN 219
Query: 261 GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGS 320
GV + P LT G DS ++W+ + L+GH V S P +V+GS
Sbjct: 220 GVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGS 279
Query: 321 HDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP--TEDCFASASAE-NIKKFNLPKGEFL 377
D+ +K WD R + TL K +V P T AS S + + + F+L + +
Sbjct: 280 KDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDM 339
Query: 378 HNMLSQQKTIINSMAVN--EEGVLATGGDNGSL 408
++ +T ++ +A + ++ T NGS+
Sbjct: 340 L-VIRDSETDLSCVAWHPIHASMVTTAAYNGSI 371
Score = 56 (24.8 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 434 EAGIYALSYDVTGSRLVTCEADKTIKMW 461
E I+A+ Y G L T +DKT + W
Sbjct: 416 EKAIHAVEYHPLGHLLCTAGSDKTARFW 443
Score = 47 (21.6 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 25/110 (22%), Positives = 40/110 (36%)
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWD-LRYGKTMLTLTHHKKSVRAMALHPTEDCF 358
H+ + +V P + T D T +FW R M +A A + + +
Sbjct: 415 HEKAIHAVEYHPLGHLLCTAGSDKTARFWSRARPNDPMAWKDAVYTDSKAGAWYYSVNNN 474
Query: 359 ASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSL 408
+A E+ E +N + NS G A+GGD GS+
Sbjct: 475 VNAVMEDPNAVKNEDDETANN----DDPLSNSGRRRGVGASASGGDTGSV 520
Score = 41 (19.5 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 34 THGRLPPP-DPESKKIRISHKLNLE 57
++GR+ P DP+S+ ++++ N+E
Sbjct: 18 SNGRINKPRDPKSQDKYVAYQQNIE 42
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 215 (80.7 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 47/198 (23%), Positives = 92/198 (46%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
++ H + ++ + + + W +G + T+K W + ++ H VR +A S
Sbjct: 172 IMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNVN-NISAHANGVRDIAFSPND 230
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ + GDD +K W+ K R+ GH V HP + ++++G +D++ ++WD R
Sbjct: 231 SKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPR 290
Query: 290 TKMQIFALAGHDNTVCSVFTRP--TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
+ + L G +TV +P T + + S D + + +DLR K ML + + +
Sbjct: 291 SANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSETDLS 350
Query: 348 AMALHPTEDCFASASAEN 365
+A HP + +A N
Sbjct: 351 CVAWHPIHASMVTTAAYN 368
Score = 169 (64.5 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 44/160 (27%), Positives = 67/160 (41%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQV 220
W + IS H VR +AF +++ F T D IKIW+ G + TL+GH +V
Sbjct: 204 WQPNFNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEV 263
Query: 221 RGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHP--TIDILLTGG 278
+ + S D VK WD + + HG V P T +L +
Sbjct: 264 KSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVS 323
Query: 279 RDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVT 318
RD CR++D+RT + + + + V P +VT
Sbjct: 324 RDRSCRIFDLRTMKDMLVIRDSETDLSCVAWHPIHASMVT 363
Score = 153 (58.9 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 50/213 (23%), Positives = 90/213 (42%)
Query: 201 IWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLS 260
+W+ + + H + + S+ ++ S + VK W N V + H +
Sbjct: 161 LWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNV-NNISAHAN 219
Query: 261 GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGS 320
GV + P LT G DS ++W+ + L+GH V S P +V+GS
Sbjct: 220 GVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGS 279
Query: 321 HDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP--TEDCFASASAE-NIKKFNLPKGEFL 377
D+ +K WD R + TL K +V P T AS S + + + F+L + +
Sbjct: 280 KDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDM 339
Query: 378 HNMLSQQKTIINSMAVN--EEGVLATGGDNGSL 408
++ +T ++ +A + ++ T NGS+
Sbjct: 340 L-VIRDSETDLSCVAWHPIHASMVTTAAYNGSI 371
Score = 56 (24.8 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 434 EAGIYALSYDVTGSRLVTCEADKTIKMW 461
E I+A+ Y G L T +DKT + W
Sbjct: 416 EKAIHAVEYHPLGHLLCTAGSDKTARFW 443
Score = 47 (21.6 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 25/110 (22%), Positives = 40/110 (36%)
Query: 300 HDNTVCSVFTRPTDPQVVTGSHDSTIKFWD-LRYGKTMLTLTHHKKSVRAMALHPTEDCF 358
H+ + +V P + T D T +FW R M +A A + + +
Sbjct: 415 HEKAIHAVEYHPLGHLLCTAGSDKTARFWSRARPNDPMAWKDAVYTDSKAGAWYYSVNNN 474
Query: 359 ASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSL 408
+A E+ E +N + NS G A+GGD GS+
Sbjct: 475 VNAVMEDPNAVKNEDDETANN----DDPLSNSGRRRGVGASASGGDTGSV 520
Score = 41 (19.5 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 34 THGRLPPP-DPESKKIRISHKLNLE 57
++GR+ P DP+S+ ++++ N+E
Sbjct: 18 SNGRINKPRDPKSQDKYVAYQQNIE 42
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 233 (87.1 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 62/261 (23%), Positives = 115/261 (44%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV + + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ ++++G + V R
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLR 193
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V ++ Q ++GS D TI+ W L + + T H +
Sbjct: 194 VWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 253
Query: 345 SVRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG----VL 399
V A+ ++ ++ I +L + + ++ ++K + M ++ +
Sbjct: 254 GVWALQVNEAFTHVYSGGRDRKIYCTDLRNPD-IRVLICEEKAPVLKMELDRSADPPPAI 312
Query: 400 ATGGDNGSLWFWDWKSGHNFQ 420
S+ W K HNF+
Sbjct: 313 WVATTKSSVNKWTLKGIHNFR 333
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 57/215 (26%), Positives = 99/215 (46%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ---IFALAGHDNTVCSVFTRPTDPQV 316
+GV L L P ++ L T GRDS+ R+W + Q I ++ H + V + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IK 367
++ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 ISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLT 150
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
+ LS K I S+A+N+ G V+ +G L WD ++ A+ +
Sbjct: 151 ALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTC-----AKLMK 205
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + AL + G++ ++ +D TI++W
Sbjct: 206 LKGHTDN---VKALLLNRDGTQCLSGSSDGTIRLW 237
Score = 159 (61.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 38/164 (23%), Positives = 73/164 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + T +GS ++ +++WD + L GH + V+ L ++ T
Sbjct: 164 LSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGT 223
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRN 283
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLR 331
+++ + R DP + + S++ W L+
Sbjct: 284 PDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSSVNKWTLK 327
Score = 138 (53.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 51/236 (21%), Positives = 99/236 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDV---AKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
V ++ D + T D I+IW V + ++ H + V + + + S
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLIS 92
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
A D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 ASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTAL 152
Query: 295 FA---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
A L+G+ +++ S+ +V+GS + ++ WD R ++ L H +
Sbjct: 153 TASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDN 212
Query: 346 VRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V+A+ L+ C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 VKALLLNRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 257
Score = 37 (18.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWD 412
+II +N++ + T N ++ +WD
Sbjct: 362 SIIQCHILNDKRHILTKDTNNNVAYWD 388
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 239 (89.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C HP + I++T
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 246
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 295
Score = 214 (80.4 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 94 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 153
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 154 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 213
Query: 286 WDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
WD + K + L GH N C+ F P P ++TGS D T++ W + TL + +
Sbjct: 214 WDYQNKTCVQTLEGHAQNVSCASF-HPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 272
Query: 345 SVRAMA 350
V +A
Sbjct: 273 RVWCVA 278
Score = 186 (70.5 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 52/241 (21%), Positives = 100/241 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+SV + W + ++ +W+ TL T VR ++ ++ + D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QI 294
D Q++ ++ + + + H + C+ +HPT +LT D + ++WD K Q+
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQV 137
Query: 295 FALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
F GH + V + P D Q + S D TIK W L TL H+K V + +
Sbjct: 138 FE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 195
Query: 354 TED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWF 410
D + A +K ++ + + + + + E ++ TG ++G++
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 255
Query: 411 W 411
W
Sbjct: 256 W 256
Score = 148 (57.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 58/274 (21%), Positives = 116/274 (42%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K LT ++V+ + + +M ++ + V W+ E +++++ V
Sbjct: 7 IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 66
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++TG D RV++ T ++ H + + + PT P ++T S D IK W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 329 DL-RYGKTMLTLTHHKKSVRAMALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQK 385
D + H V + ++P ++ FASAS + IK + L + +K
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 386 TI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSY 442
+ I+ + ++ L +G D+ + WD+ Q +T VQ +L+ A + S+
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDY-------QNKTCVQ--TLEGHAQNVSCASF 237
Query: 443 DVTGSRLVTCEADKTIKMWREDETATPETHPLNF 476
++T D T+++W T LN+
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLEST--LNY 269
Score = 41 (19.5 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 29/156 (18%), Positives = 61/156 (39%)
Query: 309 TRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK 368
T TDP+ + ++ +L+ + ++ + +A C S + E +
Sbjct: 636 TVSTDPE---HRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHH 692
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQP 428
G L S +++N +A EG G +N + + + G + +++
Sbjct: 693 AQDYGGLLLLATASGNASMVNKLA---EGAERDGKNNVAFMSY-FLQGKLDACLELLIRT 748
Query: 429 GSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
G L EA A +Y + + + +K+WRE+
Sbjct: 749 GRLP-EAAFLARTY-------LPSQVSRVVKLWREN 776
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 232 (86.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 53/188 (28%), Positives = 90/188 (47%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV + + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ I+++G + V R
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLR 193
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V ++ Q ++GS D TI+ W L + + T H +
Sbjct: 194 VWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 253
Query: 345 SVRAMALH 352
V A+ ++
Sbjct: 254 GVWALQVN 261
Score = 177 (67.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ---IFALAGHDNTVCSVFTRPTDPQV 316
+GV L L P ++ L T GRDS+ R+W + Q I ++ H + V + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IK 367
++ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 ISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLT 150
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
+ LS K I S+A+N+ G ++ +G L WD ++ A+ +
Sbjct: 151 ALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTC-----AKLMK 205
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + AL + G++ ++ +D TI++W
Sbjct: 206 LKGHTDN---VKALLLNRDGTQCLSGSSDGTIRLW 237
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 39/164 (23%), Positives = 73/164 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + T +GS ++ +++WD + L GH + V+ L ++ T
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGT 223
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRN 283
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLR 331
+++ + R DP + + ST+ W L+
Sbjct: 284 PDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLK 327
Score = 137 (53.3 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 51/236 (21%), Positives = 99/236 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDV---AKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
V ++ D + T D I+IW V + ++ H + V + + + S
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLIS 92
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
A D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 ASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTAL 152
Query: 295 FA---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
A L+G+ +++ S+ +V+GS + ++ WD R ++ L H +
Sbjct: 153 TASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDN 212
Query: 346 VRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V+A+ L+ C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 VKALLLNRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 257
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 232 (86.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 65/263 (24%), Positives = 109/263 (41%)
Query: 175 LGWVRSVAFDHSNTWFCTGSADRTIKIWDVAK-------GTL-----KLTLTGHIEQVRG 222
L V AF + F G AD +I ++ G+ K +L GH V G
Sbjct: 349 LSAVNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFG 408
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
+++S + ++ S +D + W + I Y GH + ++ + P T D
Sbjct: 409 VSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQT 468
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+WD+ + GH N V V P + TGS D T + WD+R G T+ H
Sbjct: 469 ARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAH 528
Query: 343 KKSVRAMALHPTEDCFASASAENI-KKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V A+ + ASA I K ++L + H + +I+ S++ + + +L
Sbjct: 529 HSPVSALCMSADGLSLASADESGIIKVWDL-RSSNQHVSFVKHSSIVYSLSFSYDNKILV 587
Query: 401 TGGDNGSLWFWDWKSGHNFQQAQ 423
+GG + + FWD +N +
Sbjct: 588 SGGADTDVNFWDLTYRNNLSDGE 610
Score = 206 (77.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 66/270 (24%), Positives = 122/270 (45%)
Query: 222 GLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGR 279
G A SS H Y S + Q QN+ ++ S GH V+ + + P + +L+
Sbjct: 367 GCADSSIHLYS-STNNGPQPLVGS--QNEPLQKSSLIGHTRPVFGVSISPQKEFILSCSE 423
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D R+W TK I AGH+ + V P T SHD T + WD+ + +
Sbjct: 424 DGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVF 483
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEGV 398
H+ V ++ HP A+ S+++ + +++ G + + + + ++++ ++ +G+
Sbjct: 484 VGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVR-VFNAHHSPVSALCMSADGL 542
Query: 399 -LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKT 457
LA+ ++G + WD +S + Q + V+ S+ +Y+LS+ LV+ AD
Sbjct: 543 SLASADESGIIKVWDLRSSN---QHVSFVKHSSI-----VYSLSFSYDNKILVSGGADTD 594
Query: 458 IKMWR---EDETATPETHPL--NFKPPKDI 482
+ W + + E PL NFK I
Sbjct: 595 VNFWDLTYRNNLSDGEQSPLLFNFKTKNTI 624
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/231 (24%), Positives = 92/231 (39%)
Query: 173 GHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSKHTY 231
GH V V+ + + S D ++W K T+ + GH + + S Y
Sbjct: 401 GHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTI-VKYAGHNAPIWDVQFSPFGYY 459
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+A D+ + WD+E +R + GH + V C+ HP L TG D R+WD+RT
Sbjct: 460 FATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTG 519
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMAL 351
+ H + V ++ + + IK WDLR ++ H V +++
Sbjct: 520 GTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSF 579
Query: 352 HPTEDCFASASAENIKKF-------NLPKGE---FLHNMLSQQKTIINSMA 392
S A+ F NL GE L N ++ TII +++
Sbjct: 580 SYDNKILVSGGADTDVNFWDLTYRNNLSDGEQSPLLFNFKTKN-TIIQNLS 629
Score = 186 (70.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY 231
+GH + V F +F T S D+T ++WDV GH V ++ Y
Sbjct: 442 AGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAY 501
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + D + WD+ +R ++ H S V L + L + + +VWD+R+
Sbjct: 502 LATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSS 561
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
Q + H + V S+ + +V+G D+ + FWDL Y
Sbjct: 562 NQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDLTY 602
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/120 (32%), Positives = 56/120 (46%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
RV GH V V+F + + TGS+D T ++WDV G H V L +S+
Sbjct: 481 RVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSAD 540
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ SA + +K WDL + S+ H S VY L IL++GG D+ WD+
Sbjct: 541 GLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDL 600
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 232 (86.7 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 53/219 (24%), Positives = 97/219 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R++S H G V F N + + S D + ++W V T + GH V +A
Sbjct: 374 RLLS-HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPF 432
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y +A D+ + W + +R + GHLS V C+ HP +LTG D CR+WD+
Sbjct: 433 GHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH V +V P + + + I WD+ G+ + T+ H+ ++ +
Sbjct: 493 HRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYS 552
Query: 349 MALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKT 386
++ S ++ ++ +++ K + +N +S T
Sbjct: 553 LSFSRESTVLVSGGSDCTVRAWDVFKTNY-NNPVSSSLT 590
Score = 223 (83.6 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 54/208 (25%), Positives = 90/208 (43%)
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID 272
L H V G S + Y+ S +D + W ++ + +Y GH V+ + P
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
T D ++W + AGH + V V P V+TGS D T + WD+
Sbjct: 435 YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Query: 333 GKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSM 391
G ++ H + V A+A+ P ASA +E I +++ G + M + I +
Sbjct: 495 GHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLS 554
Query: 392 AVNEEGVLATGGDNGSLWFWD-WKSGHN 418
E VL +GG + ++ WD +K+ +N
Sbjct: 555 FSRESTVLVSGGSDCTVRAWDVFKTNYN 582
Score = 158 (60.7 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 48/220 (21%), Positives = 89/220 (40%)
Query: 258 HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVV 317
H VY P LL+ D+ R+W + TK + A GH V V P
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFA 437
Query: 318 TGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI-KKFNLPKGEF 376
T SHD T + W + + H V + HP + S++ + +++ +G
Sbjct: 438 TASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHS 497
Query: 377 LHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA 435
+ + + + ++A+ +G +A+ G + WD +G + +
Sbjct: 498 VR-VFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMR--------GHRG 548
Query: 436 GIYALSYDVTGSRLVTCEADKTIKMWREDETATPETHPLN 475
IY+LS+ + LV+ +D T++ W D T +P++
Sbjct: 549 NIYSLSFSRESTVLVSGGSDCTVRAW--DVFKTNYNNPVS 586
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 61/233 (26%), Positives = 99/233 (42%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
++GH + V F T + S D TIK+WD G L+ TL GH + V +A+ +
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 231 YMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ S D +K WD Q ++S GH V + PT D +L+ RD + WDI
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAM 349
T ++ GH++ V + + S D T+ W L L H+ +V +
Sbjct: 222 TGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECV 281
Query: 350 ALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKT-IINSMAVNEEGVLAT 401
P + + + + + P+G H + S + I + +N VL T
Sbjct: 282 EWAP-DTAYTNVTGQQ------PEGNSTHILFSGSRDRSIKAWNINTGDVLFT 327
Score = 216 (81.1 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 59/217 (27%), Positives = 96/217 (44%)
Query: 165 WKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLA 224
+ C + + GH V SV F + + + S D TIK WD++ G T GH + VR +
Sbjct: 181 YDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIR 240
Query: 225 VSSKHTYMFSAGDDKQVKCWDL--EQNKVIRSYHGHLSGVYCL------------GLHP- 269
+S+ T SA D+ V W + K++ H H V C+ G P
Sbjct: 241 ISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEH--AVECVEWAPDTAYTNVTGQQPE 298
Query: 270 --TIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKF 327
+ IL +G RD + W+I T +F L H+N V + P +++ + D T++
Sbjct: 299 GNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRV 358
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
W+L + M + H+ V +A H T + S +
Sbjct: 359 WELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVD 395
Score = 213 (80.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 51/180 (28%), Positives = 81/180 (45%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGH---IE----- 218
C GH WVR + + T F + S D+T+ +W A + KL L H +E
Sbjct: 225 CVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWA 284
Query: 219 ------QVRGLAVSSKHTY-MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
V G T+ +FS D+ +K W++ V+ + H + V L HP
Sbjct: 285 PDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKG 344
Query: 272 DILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L++ D RVW++ + + A+ H++ V +V T P V+TGS D + K W+ R
Sbjct: 345 KYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 201 (75.8 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 54/202 (26%), Positives = 87/202 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAK--GTLKLTLTGHIEQVRGLAVS 226
R + GH V +A D + + S+D +IK+WD + LK +L GH V +
Sbjct: 142 RTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLK-SLKGHEHTVSSVTFL 200
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
++ SA D +K WD+ + ++ GH V + + + + D VW
Sbjct: 201 PTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVW 260
Query: 287 DIRTKMQIFALAGHDNTV-C------SVFTRPTDPQ--------VVTGSHDSTIKFWDLR 331
TK L H++ V C + +T T Q + +GS D +IK W++
Sbjct: 261 SFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNIN 320
Query: 332 YGKTMLTLTHHKKSVRAMALHP 353
G + TL H+ VR +A HP
Sbjct: 321 TGDVLFTLLAHENWVRGLAFHP 342
Score = 189 (71.6 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 69/266 (25%), Positives = 112/266 (42%)
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID 272
LTGH + + T M S +D +K WD E ++ R+ GH V + +
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 273 ILLTGGRDSVCRVWDI-RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L++ D ++WD +T + +L GH++TV SV PT V++ S D TIK WD+
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 332 YGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI--------KKFNLPKGEFLHNM--- 380
G + T H VR + + FASAS + K L + H +
Sbjct: 222 TGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECV 281
Query: 381 -LSQQKTIINSMAVNEEG----VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA 435
+ N EG +L +G + S+ W+ +G T+ L E
Sbjct: 282 EWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTG---DVLFTL-----LAHEN 333
Query: 436 GIYALSYDVTGSRLVTCEADKTIKMW 461
+ L++ G L++ DKT+++W
Sbjct: 334 WVRGLAFHPKGKYLISVADDKTLRVW 359
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/227 (20%), Positives = 92/227 (40%)
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
++S GH V + PT D +L+ RD + WDI T ++ GH++ V +
Sbjct: 184 LKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISN 243
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP----------------TE 355
+ S D T+ W L L H+ +V + P T
Sbjct: 244 DGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTH 303
Query: 356 DCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWK 414
F+ + +IK +N+ G+ L +L+ + + +A + +G L + D+ +L W+
Sbjct: 304 ILFSGSRDRSIKAWNINTGDVLFTLLAHENWV-RGLAFHPKGKYLISVADDKTLRVWELS 362
Query: 415 SGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
+ Q+ ++ E + +++ T ++T D + K+W
Sbjct: 363 A----QRCMKAIEA----HEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 234 (87.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 53/188 (28%), Positives = 90/188 (47%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV + + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 73 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 132
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ ++++G + V R
Sbjct: 133 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLR 192
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V S+ Q ++GS D TI+ W L + + T H +
Sbjct: 193 VWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 252
Query: 345 SVRAMALH 352
V A+ ++
Sbjct: 253 GVWALQVN 260
Score = 173 (66.0 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 56/214 (26%), Positives = 98/214 (45%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ--IFALAGHDNTVCSVFTRPTDPQVV 317
+GV L L P ++ L T GRDS+ R+W + I ++ H + V + ++
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKDPYIASMEHHTDWVNDIVLCCNGKTLI 90
Query: 318 TGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IKK 368
+ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 SASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA 150
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQ 427
+ LS K I S+A+N+ G V+ +G L WD ++ A+ +
Sbjct: 151 LTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTC-----AKLMKL 205
Query: 428 PGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + L+ D G++ ++ +D TI++W
Sbjct: 206 KGHTDNVKSLL-LNRD--GTQCLSGSSDGTIRLW 236
Score = 165 (63.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 39/164 (23%), Positives = 73/164 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + T +GS ++ +++WD + L GH + V+ L ++ T
Sbjct: 163 LSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGT 222
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 223 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRN 282
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLR 331
+++ + R DP + + ST+ W L+
Sbjct: 283 PDIRVLICEEKAPVLKMELDRSADPHNAIWVSTTKSTVNKWSLK 326
Score = 140 (54.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 51/235 (21%), Positives = 99/235 (42%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVA--KGTLKLTLTGHIEQVRGLAVSSKHTYMFSA 235
V ++ D + T D I+IW V K ++ H + V + + + SA
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKDPYIASMEHHTDWVNDIVLCCNGKTLISA 92
Query: 236 GDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIF 295
D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 SSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALT 152
Query: 296 A---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSV 346
A L+G+ +++ S+ +V+GS + ++ WD R ++ L H +V
Sbjct: 153 ASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNV 212
Query: 347 RAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
+++ L+ C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 KSLLLNRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 256
Score = 37 (18.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWD 412
+II +N++ + T N ++ +WD
Sbjct: 361 SIIQCHILNDKRHILTKDTNNNVAYWD 387
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 233 (87.1 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 50/197 (25%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V +F + + S D T+++W + T + GH V S
Sbjct: 517 KILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 576
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S G D+ + W + + +R + GHL+ V C HP + + TG D R+WD+
Sbjct: 577 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDV 636
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH + S+ P + TG+ D + WD+ +G + L H ++ A
Sbjct: 637 LNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYA 696
Query: 349 MALHPTEDCFASASAEN 365
+ + AS S +N
Sbjct: 697 LRFSRDGEILASGSMDN 713
Score = 212 (79.7 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 57/209 (27%), Positives = 98/209 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK+ L GH V G + S Y+ S +D V+ W L+ + Y GH V+
Sbjct: 516 LKI-LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 574
Query: 269 PTIDILLTGGRDSVCRVW--DIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTI 325
P ++GG D V R+W D ++IFA GH + C+ F P + TGS D T+
Sbjct: 575 PYGYYFVSGGHDRVARLWATDHYQPLRIFA--GHLADVTCTRF-HPNSNYIATGSADRTV 631
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
+ WD+ G + T HK + ++A P A+ + + + +++ G + +
Sbjct: 632 RLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 691
Query: 385 KTIINSMAVNEEG-VLATGGDNGSLWFWD 412
TI ++ + +G +LA+G + ++ WD
Sbjct: 692 DTIY-ALRFSRDGEILASGSMDNTVRLWD 719
Score = 201 (75.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 57/246 (23%), Positives = 105/246 (42%)
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
+++R + ++ + + DD + D + ++ +GH VY P + LL+
Sbjct: 482 KKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSC 541
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D R+W ++T + GH+ V P V+G HD + W + + +
Sbjct: 542 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 601
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V HP + A+ SA+ ++ +++ G + + + K I+S+A +
Sbjct: 602 IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLAFSPN 660
Query: 397 G-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
G LATG +G + WD GH + G D+ IYAL + G L + D
Sbjct: 661 GRFLATGATDGRVLLWD--IGHGLMVGEL---KGHTDT---IYALRFSRDGEILASGSMD 712
Query: 456 KTIKMW 461
T+++W
Sbjct: 713 NTVRLW 718
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R+ +GHL V F ++ + TGSADRT+++WDV G TGH + LA S
Sbjct: 601 RIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN 660
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
++ + D +V WD+ ++ GH +Y L +IL +G D+ R+WD
Sbjct: 661 GRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 187 (70.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 164 PWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
P C Y ++ + G + +V ++ G AD T+++W V L+ ++
Sbjct: 439 PSICFYTFLNAYQG-LTAVDITDDSSMIVGGFADSTVRVWSVTPKKLR-----SVKAAAD 492
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
L++ K + DD + D + ++ +GH VY P + LL+ D
Sbjct: 493 LSLIDKES------DDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGT 546
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+W ++T + GH+ V P V+G HD + W + + + H
Sbjct: 547 VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 606
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V HP + A+ SA+ ++ +++ G + + + K I+S+A + G LA
Sbjct: 607 LADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLAFSPNGRFLA 665
Query: 401 TGGDNGSLWFWDWKSGH 417
TG +G + WD GH
Sbjct: 666 TGATDGRVLLWD--IGH 680
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C R+ +GH G + S+AF + + TG+ D + +WD+ G + L GH + + L S
Sbjct: 641 CVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFS 700
Query: 227 SKHTYMFSAGDDKQVKCWD 245
+ S D V+ WD
Sbjct: 701 RDGEILASGSMDNTVRLWD 719
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 239 (89.2 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C HP + I++T
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 246
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 295
Score = 214 (80.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 94 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 153
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 154 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 213
Query: 286 WDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
WD + K + L GH N C+ F P P ++TGS D T++ W + TL + +
Sbjct: 214 WDYQNKTCVQTLEGHAQNVSCASF-HPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 272
Query: 345 SVRAMA 350
V +A
Sbjct: 273 RVWCVA 278
Score = 186 (70.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 52/241 (21%), Positives = 100/241 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+SV + W + ++ +W+ TL T VR ++ ++ + D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QI 294
D Q++ ++ + + + H + C+ +HPT +LT D + ++WD K Q+
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQV 137
Query: 295 FALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
F GH + V + P D Q + S D TIK W L TL H+K V + +
Sbjct: 138 FE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 195
Query: 354 TED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWF 410
D + A +K ++ + + + + + E ++ TG ++G++
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 255
Query: 411 W 411
W
Sbjct: 256 W 256
Score = 148 (57.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 58/274 (21%), Positives = 116/274 (42%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K LT ++V+ + + +M ++ + V W+ E +++++ V
Sbjct: 7 IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 66
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++TG D RV++ T ++ H + + + PT P ++T S D IK W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 329 DL-RYGKTMLTLTHHKKSVRAMALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQK 385
D + H V + ++P ++ FASAS + IK + L + +K
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 386 TI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSY 442
+ I+ + ++ L +G D+ + WD+ Q +T VQ +L+ A + S+
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDY-------QNKTCVQ--TLEGHAQNVSCASF 237
Query: 443 DVTGSRLVTCEADKTIKMWREDETATPETHPLNF 476
++T D T+++W T LN+
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLEST--LNY 269
Score = 40 (19.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 389 NSMAVNE--EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
N+ VN+ EG G +N + + + G + +++ G L EA A +Y
Sbjct: 708 NASMVNKLAEGAERDGKNNVAFMSY-FLQGKLDACLELLIRTGRLP-EAAFLARTY---- 761
Query: 447 SRLVTCEADKTIKMWRED 464
+ + + +K+WRE+
Sbjct: 762 ---LPSQVSRVVKLWREN 776
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 239 (89.2 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C HP + I++T
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 246
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 295
Score = 214 (80.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 94 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 153
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 154 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 213
Query: 286 WDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
WD + K + L GH N C+ F P P ++TGS D T++ W + TL + +
Sbjct: 214 WDYQNKTCVQTLEGHAQNVSCASF-HPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 272
Query: 345 SVRAMA 350
V +A
Sbjct: 273 RVWCVA 278
Score = 186 (70.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 52/241 (21%), Positives = 100/241 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+SV + W + ++ +W+ TL T VR ++ ++ + D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QI 294
D Q++ ++ + + + H + C+ +HPT +LT D + ++WD K Q+
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQV 137
Query: 295 FALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
F GH + V + P D Q + S D TIK W L TL H+K V + +
Sbjct: 138 FE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 195
Query: 354 TED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWF 410
D + A +K ++ + + + + + E ++ TG ++G++
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 255
Query: 411 W 411
W
Sbjct: 256 W 256
Score = 148 (57.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 58/274 (21%), Positives = 116/274 (42%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K LT ++V+ + + +M ++ + V W+ E +++++ V
Sbjct: 7 IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 66
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++TG D RV++ T ++ H + + + PT P ++T S D IK W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 329 DL-RYGKTMLTLTHHKKSVRAMALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQK 385
D + H V + ++P ++ FASAS + IK + L + +K
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 386 TI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSY 442
+ I+ + ++ L +G D+ + WD+ Q +T VQ +L+ A + S+
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDY-------QNKTCVQ--TLEGHAQNVSCASF 237
Query: 443 DVTGSRLVTCEADKTIKMWREDETATPETHPLNF 476
++T D T+++W T LN+
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLEST--LNY 269
Score = 40 (19.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 389 NSMAVNE--EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
N+ VN+ EG G +N + + + G + +++ G L EA A +Y
Sbjct: 708 NASMVNKLAEGAERDGKNNVAFMSY-FLQGKLDACLELLIRTGRLP-EAAFLARTY---- 761
Query: 447 SRLVTCEADKTIKMWRED 464
+ + + +K+WRE+
Sbjct: 762 ---LPSQVSRVVKLWREN 776
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 239 (89.2 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C HP + I++T
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 246
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 295
Score = 214 (80.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 94 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 153
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 154 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 213
Query: 286 WDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
WD + K + L GH N C+ F P P ++TGS D T++ W + TL + +
Sbjct: 214 WDYQNKTCVQTLEGHAQNVSCASF-HPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 272
Query: 345 SVRAMA 350
V +A
Sbjct: 273 RVWCVA 278
Score = 186 (70.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 52/241 (21%), Positives = 100/241 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+SV + W + ++ +W+ TL T VR ++ ++ + D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QI 294
D Q++ ++ + + + H + C+ +HPT +LT D + ++WD K Q+
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQV 137
Query: 295 FALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
F GH + V + P D Q + S D TIK W L TL H+K V + +
Sbjct: 138 FE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 195
Query: 354 TED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWF 410
D + A +K ++ + + + + + E ++ TG ++G++
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 255
Query: 411 W 411
W
Sbjct: 256 W 256
Score = 148 (57.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 58/274 (21%), Positives = 116/274 (42%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K LT ++V+ + + +M ++ + V W+ E +++++ V
Sbjct: 7 IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 66
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++TG D RV++ T ++ H + + + PT P ++T S D IK W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 329 DL-RYGKTMLTLTHHKKSVRAMALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQK 385
D + H V + ++P ++ FASAS + IK + L + +K
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 386 TI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSY 442
+ I+ + ++ L +G D+ + WD+ Q +T VQ +L+ A + S+
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDY-------QNKTCVQ--TLEGHAQNVSCASF 237
Query: 443 DVTGSRLVTCEADKTIKMWREDETATPETHPLNF 476
++T D T+++W T LN+
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLEST--LNY 269
Score = 40 (19.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 389 NSMAVNE--EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
N+ VN+ EG G +N + + + G + +++ G L EA A +Y
Sbjct: 708 NASMVNKLAEGAERDGKNNVAFMSY-FLQGKLDACLELLIRTGRLP-EAAFLARTY---- 761
Query: 447 SRLVTCEADKTIKMWRED 464
+ + + +K+WRE+
Sbjct: 762 ---LPSQVSRVVKLWREN 776
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 239 (89.2 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 98 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 157
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C HP + I++T
Sbjct: 158 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 217
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 218 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 266
Score = 214 (80.4 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 65 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 124
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 125 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 184
Query: 286 WDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
WD + K + L GH N C+ F P P ++TGS D T++ W + TL + +
Sbjct: 185 WDYQNKTCVQTLEGHAQNVSCASF-HPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 243
Query: 345 SVRAMA 350
V +A
Sbjct: 244 RVWCVA 249
Score = 180 (68.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 45/182 (24%), Positives = 84/182 (46%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT--LTGHIEQVRGLAVSSKHTYMFSA 235
VR+ F W TG+ D I++++ TL+ H + +R +AV ++ ++
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNY--NTLERVHMFEAHSDYIRCIAVHPTQPFILTS 88
Query: 236 GDDKQVKCWDLEQN-KVIRSYHGHLSGVYCLGLHPTIDI-LLTGGRDSVCRVWDIRTKMQ 293
DD +K WD ++ + + GH V + ++P + + D +VW + +
Sbjct: 89 SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSP 148
Query: 294 IFALAGHDNTV-CSVFTRPTD-PQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMAL 351
F L GH+ V C + D P +++G+ D +K WD + + TL H ++V +
Sbjct: 149 NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 208
Query: 352 HP 353
HP
Sbjct: 209 HP 210
Score = 172 (65.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 48/221 (21%), Positives = 93/221 (42%)
Query: 198 TIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHG 257
++ +W+ TL T VR ++ ++ + DD Q++ ++ + + +
Sbjct: 9 SVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEA 68
Query: 258 HLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QIFALAGHDNTVCSVFTRPTDP 314
H + C+ +HPT +LT D + ++WD K Q+F GH + V + P D
Sbjct: 69 HSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE--GHTHYVMQIVINPKDN 126
Query: 315 -QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTED---CFASASAENIKKFN 370
Q + S D TIK W L TL H+K V + + D + A +K ++
Sbjct: 127 NQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 186
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFW 411
+ + + + + E ++ TG ++G++ W
Sbjct: 187 YQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 227
Score = 39 (18.8 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 389 NSMAVNE--EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
N+ VN+ EG G +N + + + G + +++ G L EA A +Y
Sbjct: 679 NANMVNKLAEGAERDGKNNVAFMSY-FLQGKVDACLELLIRTGRLP-EAAFLARTY---- 732
Query: 447 SRLVTCEADKTIKMWRED 464
+ + + +K+WRE+
Sbjct: 733 ---LPSQVSRVVKLWREN 747
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 239 (89.2 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C HP + I++T
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIIT 246
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 295
Score = 214 (80.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 94 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 153
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 154 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 213
Query: 286 WDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
WD + K + L GH N C+ F P P ++TGS D T++ W + TL + +
Sbjct: 214 WDYQNKTCVQTLEGHAQNVSCASF-HPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 272
Query: 345 SVRAMA 350
V +A
Sbjct: 273 RVWCVA 278
Score = 186 (70.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 52/241 (21%), Positives = 100/241 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+SV + W + ++ +W+ TL T VR ++ ++ + D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QI 294
D Q++ ++ + + + H + C+ +HPT +LT D + ++WD K Q+
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQV 137
Query: 295 FALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
F GH + V + P D Q + S D TIK W L TL H+K V + +
Sbjct: 138 FE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 195
Query: 354 TED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWF 410
D + A +K ++ + + + + + E ++ TG ++G++
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRI 255
Query: 411 W 411
W
Sbjct: 256 W 256
Score = 148 (57.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 58/274 (21%), Positives = 116/274 (42%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K LT ++V+ + + +M ++ + V W+ E +++++ V
Sbjct: 7 IKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 66
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++TG D RV++ T ++ H + + + PT P ++T S D IK W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 329 DL-RYGKTMLTLTHHKKSVRAMALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQK 385
D + H V + ++P ++ FASAS + IK + L + +K
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 386 TI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSY 442
+ I+ + ++ L +G D+ + WD+ Q +T VQ +L+ A + S+
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDY-------QNKTCVQ--TLEGHAQNVSCASF 237
Query: 443 DVTGSRLVTCEADKTIKMWREDETATPETHPLNF 476
++T D T+++W T LN+
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLEST--LNY 269
Score = 39 (18.8 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 389 NSMAVNE--EGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTG 446
N+ VN+ EG G +N + + + G + +++ G L EA A +Y
Sbjct: 708 NANMVNKLAEGAERDGKNNVAFMSY-FLQGKVDACLELLIRTGRLP-EAAFLARTY---- 761
Query: 447 SRLVTCEADKTIKMWRED 464
+ + + +K+WRE+
Sbjct: 762 ---LPSQVSRVVKLWREN 776
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 232 (86.7 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 50/197 (25%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V +F + + S D T+++W + T + GH V S
Sbjct: 535 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 594
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S G D+ + W + + +R + GHL+ V C HP + + TG D R+WD+
Sbjct: 595 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 654
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH + S+ P + TG+ D + WD+ +G + L H +V +
Sbjct: 655 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 714
Query: 349 MALHPTEDCFASASAEN 365
+ + AS S +N
Sbjct: 715 LRFSRDGEILASGSMDN 731
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 58/209 (27%), Positives = 98/209 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK+ L GH V G + S Y+ S+ +D V+ W L+ + Y GH V+
Sbjct: 534 LKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 592
Query: 269 PTIDILLTGGRDSVCRVW--DIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTI 325
P ++GG D V R+W D ++IFA GH V C+ F P V TGS D T+
Sbjct: 593 PYGYYFVSGGHDRVARLWATDHYQPLRIFA--GHLADVNCTRF-HPNSNYVATGSADRTV 649
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
+ WD+ G + T HK + ++ P A+ + + + +++ G + +
Sbjct: 650 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 709
Query: 385 KTIINSMAVNEEG-VLATGGDNGSLWFWD 412
T+ S+ + +G +LA+G + ++ WD
Sbjct: 710 DTVC-SLRFSRDGEILASGSMDNTVRLWD 737
Score = 195 (73.7 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 46/165 (27%), Positives = 73/165 (44%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C GH V F +F +G DR ++W GH+ V
Sbjct: 575 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 634
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
Y+ + D+ V+ WD+ +R + GH ++ L P L TG D +W
Sbjct: 635 PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 694
Query: 287 DIRTKMQIFALAGHDNTVCSV-FTRPTDPQVV-TGSHDSTIKFWD 329
DI + + L GH +TVCS+ F+R D +++ +GS D+T++ WD
Sbjct: 695 DIGHGLMVGELKGHTDTVCSLRFSR--DGEILASGSMDNTVRLWD 737
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 164 PWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
P C Y ++ + G + +V ++ G AD T+++W V L+ ++Q
Sbjct: 457 PSICFYTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQASD 510
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
L++ K + DD + D + ++ +GH VY P + LL+ D
Sbjct: 511 LSLIDKES------DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 564
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+W ++T + GH+ V P V+G HD + W + + + H
Sbjct: 565 VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 624
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V HP + A+ SA+ ++ +++ G + + + K I+S+ + G LA
Sbjct: 625 LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPNGRFLA 683
Query: 401 TGGDNGSLWFWDWKSGH 417
TG +G + WD GH
Sbjct: 684 TGATDGRVLLWD--IGH 698
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 54/246 (21%), Positives = 103/246 (41%)
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
+++R + +S + + DD + D + ++ +GH VY P + LL+
Sbjct: 500 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 559
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D R+W ++T + GH+ V P V+G HD + W + + +
Sbjct: 560 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 619
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V HP + A+ SA+ ++ +++ G + + + K I+S+ +
Sbjct: 620 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 678
Query: 397 G-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
G LATG +G + WD GH + G D+ + +L + G L + D
Sbjct: 679 GRFLATGATDGRVLLWD--IGHGLMVGEL---KGHTDT---VCSLRFSRDGEILASGSMD 730
Query: 456 KTIKMW 461
T+++W
Sbjct: 731 NTVRLW 736
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 232 (86.7 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 50/197 (25%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V +F + + S D T+++W + T + GH V S
Sbjct: 537 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 596
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S G D+ + W + + +R + GHL+ V C HP + + TG D R+WD+
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH + S+ P + TG+ D + WD+ +G + L H +V +
Sbjct: 657 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 716
Query: 349 MALHPTEDCFASASAEN 365
+ + AS S +N
Sbjct: 717 LRFSRDGEILASGSMDN 733
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 58/209 (27%), Positives = 98/209 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK+ L GH V G + S Y+ S+ +D V+ W L+ + Y GH V+
Sbjct: 536 LKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 269 PTIDILLTGGRDSVCRVW--DIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTI 325
P ++GG D V R+W D ++IFA GH V C+ F P V TGS D T+
Sbjct: 595 PYGYYFVSGGHDRVARLWATDHYQPLRIFA--GHLADVNCTRF-HPNSNYVATGSADRTV 651
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
+ WD+ G + T HK + ++ P A+ + + + +++ G + +
Sbjct: 652 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Query: 385 KTIINSMAVNEEG-VLATGGDNGSLWFWD 412
T+ S+ + +G +LA+G + ++ WD
Sbjct: 712 DTVC-SLRFSRDGEILASGSMDNTVRLWD 739
Score = 195 (73.7 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 46/165 (27%), Positives = 73/165 (44%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C GH V F +F +G DR ++W GH+ V
Sbjct: 577 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 636
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
Y+ + D+ V+ WD+ +R + GH ++ L P L TG D +W
Sbjct: 637 PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 696
Query: 287 DIRTKMQIFALAGHDNTVCSV-FTRPTDPQVV-TGSHDSTIKFWD 329
DI + + L GH +TVCS+ F+R D +++ +GS D+T++ WD
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSR--DGEILASGSMDNTVRLWD 739
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 164 PWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
P C Y ++ + G + +V ++ G AD T+++W V L+ ++Q
Sbjct: 459 PSICFYTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQASD 512
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
L++ K + DD + D + ++ +GH VY P + LL+ D
Sbjct: 513 LSLIDKES------DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 566
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+W ++T + GH+ V P V+G HD + W + + + H
Sbjct: 567 VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 626
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V HP + A+ SA+ ++ +++ G + + + K I+S+ + G LA
Sbjct: 627 LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPNGRFLA 685
Query: 401 TGGDNGSLWFWDWKSGH 417
TG +G + WD GH
Sbjct: 686 TGATDGRVLLWD--IGH 700
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 54/246 (21%), Positives = 103/246 (41%)
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
+++R + +S + + DD + D + ++ +GH VY P + LL+
Sbjct: 502 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 561
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D R+W ++T + GH+ V P V+G HD + W + + +
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V HP + A+ SA+ ++ +++ G + + + K I+S+ +
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 680
Query: 397 G-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
G LATG +G + WD GH + G D+ + +L + G L + D
Sbjct: 681 GRFLATGATDGRVLLWD--IGHGLMVGEL---KGHTDT---VCSLRFSRDGEILASGSMD 732
Query: 456 KTIKMW 461
T+++W
Sbjct: 733 NTVRLW 738
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 232 (86.7 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 50/197 (25%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V +F + + S D T+++W + T + GH V S
Sbjct: 537 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 596
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S G D+ + W + + +R + GHL+ V C HP + + TG D R+WD+
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH + S+ P + TG+ D + WD+ +G + L H +V +
Sbjct: 657 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 716
Query: 349 MALHPTEDCFASASAEN 365
+ + AS S +N
Sbjct: 717 LRFSRDGEILASGSMDN 733
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 58/209 (27%), Positives = 98/209 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK+ L GH V G + S Y+ S+ +D V+ W L+ + Y GH V+
Sbjct: 536 LKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 269 PTIDILLTGGRDSVCRVW--DIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTI 325
P ++GG D V R+W D ++IFA GH V C+ F P V TGS D T+
Sbjct: 595 PYGYYFVSGGHDRVARLWATDHYQPLRIFA--GHLADVNCTRF-HPNSNYVATGSADRTV 651
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
+ WD+ G + T HK + ++ P A+ + + + +++ G + +
Sbjct: 652 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Query: 385 KTIINSMAVNEEG-VLATGGDNGSLWFWD 412
T+ S+ + +G +LA+G + ++ WD
Sbjct: 712 DTVC-SLRFSRDGEILASGSMDNTVRLWD 739
Score = 195 (73.7 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 46/165 (27%), Positives = 73/165 (44%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C GH V F +F +G DR ++W GH+ V
Sbjct: 577 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 636
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
Y+ + D+ V+ WD+ +R + GH ++ L P L TG D +W
Sbjct: 637 PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 696
Query: 287 DIRTKMQIFALAGHDNTVCSV-FTRPTDPQVV-TGSHDSTIKFWD 329
DI + + L GH +TVCS+ F+R D +++ +GS D+T++ WD
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSR--DGEILASGSMDNTVRLWD 739
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 164 PWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
P C Y ++ + G + +V ++ G AD T+++W V L+ ++Q
Sbjct: 459 PSICFYTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQAAD 512
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
L++ K + DD + D + ++ +GH VY P + LL+ D
Sbjct: 513 LSLIDKES------DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 566
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+W ++T + GH+ V P V+G HD + W + + + H
Sbjct: 567 VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 626
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V HP + A+ SA+ ++ +++ G + + + K I+S+ + G LA
Sbjct: 627 LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPNGRFLA 685
Query: 401 TGGDNGSLWFWDWKSGH 417
TG +G + WD GH
Sbjct: 686 TGATDGRVLLWD--IGH 700
Score = 185 (70.2 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 53/246 (21%), Positives = 103/246 (41%)
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
+++R + ++ + + DD + D + ++ +GH VY P + LL+
Sbjct: 502 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 561
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D R+W ++T + GH+ V P V+G HD + W + + +
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V HP + A+ SA+ ++ +++ G + + + K I+S+ +
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 680
Query: 397 G-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
G LATG +G + WD GH + G D+ + +L + G L + D
Sbjct: 681 GRFLATGATDGRVLLWD--IGHGLMVGEL---KGHTDT---VCSLRFSRDGEILASGSMD 732
Query: 456 KTIKMW 461
T+++W
Sbjct: 733 NTVRLW 738
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 232 (86.7 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 50/197 (25%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V +F + + S D T+++W + T + GH V S
Sbjct: 538 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 597
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S G D+ + W + + +R + GHL+ V C HP + + TG D R+WD+
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 657
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH + S+ P + TG+ D + WD+ +G + L H +V +
Sbjct: 658 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 717
Query: 349 MALHPTEDCFASASAEN 365
+ + AS S +N
Sbjct: 718 LRFSRDGEILASGSMDN 734
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 58/209 (27%), Positives = 98/209 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK+ L GH V G + S Y+ S+ +D V+ W L+ + Y GH V+
Sbjct: 537 LKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 269 PTIDILLTGGRDSVCRVW--DIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTI 325
P ++GG D V R+W D ++IFA GH V C+ F P V TGS D T+
Sbjct: 596 PYGYYFVSGGHDRVARLWATDHYQPLRIFA--GHLADVNCTRF-HPNSNYVATGSADRTV 652
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
+ WD+ G + T HK + ++ P A+ + + + +++ G + +
Sbjct: 653 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Query: 385 KTIINSMAVNEEG-VLATGGDNGSLWFWD 412
T+ S+ + +G +LA+G + ++ WD
Sbjct: 713 DTVC-SLRFSRDGEILASGSMDNTVRLWD 740
Score = 195 (73.7 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 46/165 (27%), Positives = 73/165 (44%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C GH V F +F +G DR ++W GH+ V
Sbjct: 578 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 637
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
Y+ + D+ V+ WD+ +R + GH ++ L P L TG D +W
Sbjct: 638 PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 697
Query: 287 DIRTKMQIFALAGHDNTVCSV-FTRPTDPQVV-TGSHDSTIKFWD 329
DI + + L GH +TVCS+ F+R D +++ +GS D+T++ WD
Sbjct: 698 DIGHGLMVGELKGHTDTVCSLRFSR--DGEILASGSMDNTVRLWD 740
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 164 PWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
P C Y ++ + G + +V ++ G AD T+++W V L+ ++Q
Sbjct: 460 PSICFYTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQAAD 513
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
L++ K + DD + D + ++ +GH VY P + LL+ D
Sbjct: 514 LSLIDKES------DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 567
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+W ++T + GH+ V P V+G HD + W + + + H
Sbjct: 568 VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 627
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V HP + A+ SA+ ++ +++ G + + + K I+S+ + G LA
Sbjct: 628 LADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPNGRFLA 686
Query: 401 TGGDNGSLWFWDWKSGH 417
TG +G + WD GH
Sbjct: 687 TGATDGRVLLWD--IGH 701
Score = 185 (70.2 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/246 (21%), Positives = 103/246 (41%)
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
+++R + ++ + + DD + D + ++ +GH VY P + LL+
Sbjct: 503 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 562
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D R+W ++T + GH+ V P V+G HD + W + + +
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V HP + A+ SA+ ++ +++ G + + + K I+S+ +
Sbjct: 623 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 681
Query: 397 G-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
G LATG +G + WD GH + G D+ + +L + G L + D
Sbjct: 682 GRFLATGATDGRVLLWD--IGHGLMVGEL---KGHTDT---VCSLRFSRDGEILASGSMD 733
Query: 456 KTIKMW 461
T+++W
Sbjct: 734 NTVRLW 739
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 234 (87.4 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 64/233 (27%), Positives = 115/233 (49%)
Query: 189 WFCTGSADRTIKIWDVA-KGT-LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDL 246
+F +GS D +KIWD + +G+ L+ TL GH VR A+SS + S DD V WD
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVR--AISSDRGKIVSGSDDLSVIVWDK 926
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
+ +++ GH S V C+ + + +LT D ++WD+RT M + + + + S
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG-ERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILS 985
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-N 365
+ + + D+ WD+R GK M L H K +R++ + ED + S +
Sbjct: 986 LEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRM--VEDTLITGSDDWT 1043
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVN--EEGVLATGGDNGSLWFWDWKSG 416
+ +++ +G +L+ + S+ + ++G++ TG +G L FW+ G
Sbjct: 1044 ARVWSVSRGS-CDAVLACHAGPVQSVEYSPFDKGII-TGSADGLLRFWENDEG 1094
Score = 230 (86.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/295 (24%), Positives = 130/295 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ GH G VR+++ D +GS D ++ +WD L L GH QV + + S
Sbjct: 895 LKGHTGTVRAISSDRGK--IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGER 952
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +A D VK WD+ + + + S + L + IL GRD+V +WDIR+
Sbjct: 953 VL-TAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRS 1011
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMA 350
Q+ L GH + S+ R + ++TGS D T + W + G L H V+++
Sbjct: 1012 GKQMHKLKGHTKWIRSI--RMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVE 1069
Query: 351 LHPTEDCFASASAENIKKF--NLPKG-EFLHNMLSQQKTIINSMAVNEEGVLATGGDNG- 406
P + + SA+ + +F N G + + N+ +I+ S+ E + DN
Sbjct: 1070 YSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSIL-SINAGENWLGIGAADNSM 1128
Query: 407 SLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
SL+ +G Q P + A + ++ D+ R+ + + +++W
Sbjct: 1129 SLFHRPSNAGTKVSGWQLYRVPQR--TAAVVRCVASDLERKRICSGGRNGVLRLW 1181
Score = 204 (76.9 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 65/253 (25%), Positives = 106/253 (41%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ GH V V S T + D T+K+WDV T+ + L
Sbjct: 935 LKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ +AG D WD+ K + GH + + + D L+TG D RVW +
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRM--VEDTLITGSDDWTARVWSVSR 1051
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG--KTMLTLTHHKKSVRA 348
LA H V SV P D ++TGS D ++FW+ G K + +T H S+
Sbjct: 1052 GSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSI-- 1109
Query: 349 MALHPTEDCFASASAEN-IKKFNLPK-------GEFLHNMLSQQKTIINSMAVN-EEGVL 399
++++ E+ +A+N + F+ P G L+ + + ++ +A + E +
Sbjct: 1110 LSINAGENWLGIGAADNSMSLFHRPSNAGTKVSGWQLYRVPQRTAAVVRCVASDLERKRI 1169
Query: 400 ATGGDNGSLWFWD 412
+GG NG L WD
Sbjct: 1170 CSGGRNGVLRLWD 1182
Score = 173 (66.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 56/239 (23%), Positives = 101/239 (42%)
Query: 231 YMFSAGDDKQVKCWD--LEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ S D VK WD L +++ + GH V + +++G D VWD
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDR--GKIVSGSDDLSVIVWDK 926
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+T + L GHD+ V V + +V+T +HD T+K WD+R + T+ ++ +
Sbjct: 927 QTTQLLEELKGHDSQVSCV-KMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILS 985
Query: 349 MALHPTEDCFASASAENIKK-FNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGS 407
+ + A+A + + +++ G+ +H + K I + V E L TG D+ +
Sbjct: 986 LEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMV--EDTLITGSDDWT 1043
Query: 408 LWFWDWKSGHNFQQAQTIVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMWREDE 465
W G + L AG + ++ Y ++T AD ++ W DE
Sbjct: 1044 ARVWSVSRG----SCDAV-----LACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDE 1093
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 223 (83.6 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 54/198 (27%), Positives = 90/198 (45%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R + H ++ + +S+ TGS D T +WDV G L + GH V + ++
Sbjct: 152 RTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPN 211
Query: 229 HT-YMFSAGD-DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
T F +G D+ WD+ V++S+ GH S V + HP D + TG DS CR++
Sbjct: 212 ETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLY 271
Query: 287 DIRT--KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
D+R ++ +FA V SV + + G +D T+ WD + + L H+
Sbjct: 272 DMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHEN 331
Query: 345 SVRAMALHPTEDCFASAS 362
V + + P ++ S
Sbjct: 332 KVSCVQVSPDGTALSTGS 349
Score = 177 (67.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 38/161 (23%), Positives = 73/161 (45%)
Query: 177 WVRSVAFDHSNTWFCTGSADRTIKIWDVAK----GTLKLTLTGHIEQVRGLAVSSKHTYM 232
W+ + A+ S + G D + ++ + K T+ H + + +
Sbjct: 114 WIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQI 173
Query: 233 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHP--TIDILLTGGRDSVCRVWDIRT 290
+ D WD+E ++++S+HGH V + L P T + ++G D + +WD+R+
Sbjct: 174 LTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRS 233
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
+ + GH + V SV P + TGS DS+ + +D+R
Sbjct: 234 GHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMR 274
Score = 160 (61.4 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 56/258 (21%), Positives = 113/258 (43%)
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID 272
L GH +V S ++ S+ D ++ WD + + + P+ +
Sbjct: 66 LKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGN 125
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFA----LAGHDNTV-CSVFTRPTDPQVVTGSHDSTIKF 327
+ GG D+ V+ I + ++ A + H + + C ++ +D Q++TGS DST
Sbjct: 126 FVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPN-SDQQILTGSGDSTCAL 184
Query: 328 WDLRYGKTMLTLTHHKKSVRAMALHPTE--DCFASASAENIKK-FNLPKGEFLHNMLSQQ 384
WD+ G+ + + H V A+ L P E + F S S + + +++ G + + Q
Sbjct: 185 WDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQ 244
Query: 385 KTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
+ NS+ + G +ATG D+ S +D ++ ++ + + G+ ++ +
Sbjct: 245 SDV-NSVKFHPCGDAIATGSDDSSCRLYDMRAD---REVAVFAKESII---FGVNSVDFS 297
Query: 444 VTGSRLVTCEADKTIKMW 461
V+G L D T+ +W
Sbjct: 298 VSGRLLFAGYNDYTVNLW 315
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/160 (25%), Positives = 69/160 (43%)
Query: 173 GHLGWVRSV--AFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
GH G V ++ A + + F +GS DR IWD+ G + + GH V +
Sbjct: 198 GHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGD 257
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSY--HGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ + DD + +D+ ++ + + + GV + + +L G D +WD
Sbjct: 258 AIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDT 317
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
++ L GH+N V V P + TGS D TI+ W
Sbjct: 318 LKSERVCLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 220 (82.5 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 74/312 (23%), Positives = 129/312 (41%)
Query: 171 ISGHLGWVRSVAFDHSN--TWFCTGSADRTIKIWDVAK---------GTLKLTLTGHIEQ 219
+ GH GWV +A N T + S D+TI +WDV G +LTGH
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHF 71
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + +SS + S DK ++ WDL Q R + H V + +++G R
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSR 131
Query: 280 DSVCRVWDIRTKMQIFALAG--HDNTVCSVFTRPT--DPQVVTGSHDSTIKFWDLRYGKT 335
D ++W+ + + + + H + V +V P+ DP +V+ D +K W+L G
Sbjct: 132 DKSIKLWNTLAQCK-YTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL--GNC 188
Query: 336 MLTLTH--HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMA 392
L H H V + + P AS + ++L +G+ L+ + +IN+M+
Sbjct: 189 RLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND--VINAMS 246
Query: 393 VNEEGVLATGGDNGSLWFWDWKSGHNFQQAQT-IVQPGSL-DSEAGIYALSYDVTGSRLV 450
+ S+ WD + ++ + I GS S +L++ G L
Sbjct: 247 FSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLF 306
Query: 451 TCEADKTIKMWR 462
D I++++
Sbjct: 307 AGYTDNIIRVYQ 318
Score = 197 (74.4 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R ++GH +V V + +GS D+T+++WD+ +G H + V +A S+
Sbjct: 63 RSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSAD 122
Query: 229 HTYMFSAGDDKQVKCWD-LEQNKVIRSYHGHLSGVYCLGLHPTI--DILLTGGRDSVCRV 285
+ + S DK +K W+ L Q K + H V + P+ ++++ G D V +V
Sbjct: 123 NRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKV 182
Query: 286 WDI-RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
W++ +++ + GH V +V P +G D WDL GK + TL +
Sbjct: 183 WNLGNCRLKTNHI-GHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDV 241
Query: 345 SVRAMALHPTEDCFASASAENIKKFNL 371
+ AM+ P +A +IK ++L
Sbjct: 242 -INAMSFSPNRYWLCAAVGSSIKIWDL 267
Score = 187 (70.9 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 75/280 (26%), Positives = 122/280 (43%)
Query: 212 TLTGHIEQVRGLAVSSKH--TYMFSAGDDKQVKCWDLEQ---------NKVIRSYHGHLS 260
TL GH V +A +++ T + S+ DK + WD++ + +RS GH
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNH 70
Query: 261 GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGS 320
V + + L+G D R+WD+ + H V SV + Q+V+GS
Sbjct: 71 FVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGS 130
Query: 321 HDSTIKFWD-LRYGKTMLTLTHHKKSVRAMALHPT--EDCFASASAENIKK-FNLPKGEF 376
D +IK W+ L K +T H V + P+ + SA + + K +NL
Sbjct: 131 RDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL 190
Query: 377 LHNMLSQQKTIINSMAVNEEGVL-ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA 435
N + +N++ V+ +G L A+GG +G WD G + T+ PG+ D
Sbjct: 191 KTNHIGHTG-YVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY---TL--PGN-DV-- 241
Query: 436 GIYALSYDVTGSRLVTCEA-DKTIKMWR-EDETATPETHP 473
I A+S+ + +R C A +IK+W ED+ E P
Sbjct: 242 -INAMSF--SPNRYWLCAAVGSSIKIWDLEDKKEIEELKP 278
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 220 (82.5 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 74/312 (23%), Positives = 129/312 (41%)
Query: 171 ISGHLGWVRSVAFDHSN--TWFCTGSADRTIKIWDVAK---------GTLKLTLTGHIEQ 219
+ GH GWV +A N T + S D+TI +WDV G +LTGH
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHF 71
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
V + +SS + S DK ++ WDL Q R + H V + +++G R
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSR 131
Query: 280 DSVCRVWDIRTKMQIFALAG--HDNTVCSVFTRPT--DPQVVTGSHDSTIKFWDLRYGKT 335
D ++W+ + + + + H + V +V P+ DP +V+ D +K W+L G
Sbjct: 132 DKSIKLWNTLAQCK-YTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL--GNC 188
Query: 336 MLTLTH--HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMA 392
L H H V + + P AS + ++L +G+ L+ + +IN+M+
Sbjct: 189 RLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND--VINAMS 246
Query: 393 VNEEGVLATGGDNGSLWFWDWKSGHNFQQAQT-IVQPGSL-DSEAGIYALSYDVTGSRLV 450
+ S+ WD + ++ + I GS S +L++ G L
Sbjct: 247 FSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLF 306
Query: 451 TCEADKTIKMWR 462
D I++++
Sbjct: 307 AGYTDNIIRVYQ 318
Score = 197 (74.4 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R ++GH +V V + +GS D+T+++WD+ +G H + V +A S+
Sbjct: 63 RSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSAD 122
Query: 229 HTYMFSAGDDKQVKCWD-LEQNKVIRSYHGHLSGVYCLGLHPTI--DILLTGGRDSVCRV 285
+ + S DK +K W+ L Q K + H V + P+ ++++ G D V +V
Sbjct: 123 NRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKV 182
Query: 286 WDI-RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
W++ +++ + GH V +V P +G D WDL GK + TL +
Sbjct: 183 WNLGNCRLKTNHI-GHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDV 241
Query: 345 SVRAMALHPTEDCFASASAENIKKFNL 371
+ AM+ P +A +IK ++L
Sbjct: 242 -INAMSFSPNRYWLCAAVGSSIKIWDL 267
Score = 187 (70.9 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 75/280 (26%), Positives = 122/280 (43%)
Query: 212 TLTGHIEQVRGLAVSSKH--TYMFSAGDDKQVKCWDLEQ---------NKVIRSYHGHLS 260
TL GH V +A +++ T + S+ DK + WD++ + +RS GH
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNH 70
Query: 261 GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGS 320
V + + L+G D R+WD+ + H V SV + Q+V+GS
Sbjct: 71 FVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGS 130
Query: 321 HDSTIKFWD-LRYGKTMLTLTHHKKSVRAMALHPT--EDCFASASAENIKK-FNLPKGEF 376
D +IK W+ L K +T H V + P+ + SA + + K +NL
Sbjct: 131 RDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL 190
Query: 377 LHNMLSQQKTIINSMAVNEEGVL-ATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA 435
N + +N++ V+ +G L A+GG +G WD G + T+ PG+ D
Sbjct: 191 KTNHIGHTG-YVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY---TL--PGN-DV-- 241
Query: 436 GIYALSYDVTGSRLVTCEA-DKTIKMWR-EDETATPETHP 473
I A+S+ + +R C A +IK+W ED+ E P
Sbjct: 242 -INAMSF--SPNRYWLCAAVGSSIKIWDLEDKKEIEELKP 278
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 207 (77.9 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R + GH G++ F N T S D T +WD+ G + GH V L+++
Sbjct: 37 RELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 95
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
S D +K WD+ + +++ GH S + + P TG D+ CR++D+
Sbjct: 96 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL 155
Query: 289 RTKMQIFALAGHDNTVCSV----FTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
R ++ + HDN +C + F+R + ++ G D WD G L H
Sbjct: 156 RADQELL-MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDN 213
Query: 345 SVRAMALHPTEDCFASAS 362
V + + T+D A A+
Sbjct: 214 RVSCLGV--TDDGMAVAT 229
Score = 200 (75.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 49/161 (30%), Positives = 77/161 (47%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY 231
+GH G V S++ F +G+ D +IK+WDV + T GH + +A + Y
Sbjct: 81 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFP-NGY 139
Query: 232 MFSAG-DDKQVKCWDL--EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
F+ G DD + +DL +Q ++ S+ + G+ + + +LL G D C +WD
Sbjct: 140 AFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDA 199
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWD 329
+ LAGHDN V + V TGS DS +K W+
Sbjct: 200 MKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 60/216 (27%), Positives = 93/216 (43%)
Query: 250 KVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFT 309
+V R GH + C I+ + G D+ C +WDI T Q AGH V S+
Sbjct: 34 RVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSL 92
Query: 310 RPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKK 368
P V+G+ D++IK WD+R T H+ + A+A P F + S + +
Sbjct: 93 APDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRL 152
Query: 369 FNLPKGEFLHNMLSQQKTI--INSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTI 425
F+L + L M S I I S+A + G +L G D+ + WD G +A +
Sbjct: 153 FDLRADQELL-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG---DRAGVL 208
Query: 426 VQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ ++ D G + T D +K+W
Sbjct: 209 A--GH-DNRVSCLGVTDD--GMAVATGSWDSFLKIW 239
Score = 132 (51.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 43/200 (21%), Positives = 91/200 (45%)
Query: 269 PTIDILLTGGRDSVCRVWDIRTK---MQIFA-LAGHDNTV-CSVFTRPTDPQVVTGSHDS 323
P+ + + GG D++C ++ ++T+ +++ L GH + C F D Q++T S D+
Sbjct: 7 PSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL--DDNQIITSSGDT 64
Query: 324 TIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLS 382
T WD+ G+ + H V +++L P F S + + +IK +++ +
Sbjct: 65 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 124
Query: 383 QQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALS 441
+ I N++A G TG D+ + +D ++ Q ++ + GI +++
Sbjct: 125 HESDI-NAVAFFPNGYAFTTGSDDATCRLFDLRAD------QELLMYSHDNIICGITSVA 177
Query: 442 YDVTGSRLVTCEADKTIKMW 461
+ +G L+ D +W
Sbjct: 178 FSRSGRLLLAGYDDFNCNIW 197
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL-AV 225
C + GH + +VAF + F TGS D T +++D+ + +L + H + G+ +V
Sbjct: 118 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL-RADQELLMYSHDNIICGITSV 176
Query: 226 S-SKHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVC 283
+ S+ + AG DD WD + GH + V CLG+ + TG DS
Sbjct: 177 AFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 236
Query: 284 RVWD 287
++W+
Sbjct: 237 KIWN 240
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 220 (82.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 74/315 (23%), Positives = 137/315 (43%)
Query: 170 VISGHLGWVRSVA--FDHSNTWFCTGSADRTIKIWDVAK-----GTLKLTLTGHIEQVRG 222
++ H V ++A D+S+ T S D++I +W + K G + LTGH V
Sbjct: 10 IMRAHTDIVTAIATPIDNSDI-IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVED 68
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
+ +SS + S D +++ WDL + R + GH V + +++ RD
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 283 CRVWDI--RTKMQIFALAGHDNTVCSVFTRPTD--PQVVTGSHDSTIKFWDLRYGKTMLT 338
++W+ K I GH V V P P +V+ S D T+K W+L+ K +
Sbjct: 129 IKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNS 188
Query: 339 LTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG 397
L H + +A+ P AS + I ++L +G+ L+++ + +II+S+ +
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGSIIHSLCFSPNR 246
Query: 398 VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAG---------IY--ALSYDVTG 446
S+ WD +S + + ++ + +E G IY +L++ G
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADG 306
Query: 447 SRLVTCEADKTIKMW 461
S L + D +++W
Sbjct: 307 STLFSGYTDGVVRVW 321
Score = 217 (81.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 57/238 (23%), Positives = 103/238 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R ++GH +V V + +GS D +++WD+A G GH + V +A S+
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 229 HTYMFSAGDDKQVKCWDL--EQNKVIRSYHGHLSGVYCLGLHPT--IDILLTGGRDSVCR 284
+ + SA D+ +K W+ E I GH V C+ P + +++ D +
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VW+++ +L GH + +V P +G D I WDL GK + +L
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL-EAGS 235
Query: 345 SVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATG 402
+ ++ P +A+ +I+ ++L + ++ K + S A EG + TG
Sbjct: 236 IIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDL----KVDLKSEAEKNEGGVGTG 289
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 231 (86.4 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 50/197 (25%), Positives = 86/197 (43%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+++ GH G V +F + + S D T+++W + T + GH V S
Sbjct: 538 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 597
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y S G D+ + W + + +R + GHL+ V C HP + + TG D R+WD+
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDV 657
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+ GH + S+ P + TG+ D + WD+ +G + L H +V +
Sbjct: 658 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 717
Query: 349 MALHPTEDCFASASAEN 365
+ + AS S +N
Sbjct: 718 LRFSRDGEILASGSMDN 734
Score = 207 (77.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 57/209 (27%), Positives = 98/209 (46%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
LK+ L GH V G + S Y+ S+ +D V+ W L+ + Y GH V+
Sbjct: 537 LKI-LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 269 PTIDILLTGGRDSVCRVW--DIRTKMQIFALAGHDNTV-CSVFTRPTDPQVVTGSHDSTI 325
P ++GG D V R+W D ++IFA GH V C+ + P V TGS D T+
Sbjct: 596 PYGYYFVSGGHDRVARLWATDHYQPLRIFA--GHLADVNCTRY-HPNSNYVATGSADRTV 652
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQ 384
+ WD+ G + T HK + ++ P A+ + + + +++ G + +
Sbjct: 653 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Query: 385 KTIINSMAVNEEG-VLATGGDNGSLWFWD 412
T+ S+ + +G +LA+G + ++ WD
Sbjct: 713 DTVC-SLRFSRDGEILASGSMDNTVRLWD 740
Score = 195 (73.7 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 46/165 (27%), Positives = 73/165 (44%)
Query: 167 CYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVS 226
C GH V F +F +G DR ++W GH+ V
Sbjct: 578 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYH 637
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
Y+ + D+ V+ WD+ +R + GH ++ L P L TG D +W
Sbjct: 638 PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 697
Query: 287 DIRTKMQIFALAGHDNTVCSV-FTRPTDPQVV-TGSHDSTIKFWD 329
DI + + L GH +TVCS+ F+R D +++ +GS D+T++ WD
Sbjct: 698 DIGHGLMVGELKGHTDTVCSLRFSR--DGEILASGSMDNTVRLWD 740
Score = 190 (71.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 164 PWKC-YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRG 222
P C Y ++ + G + +V ++ G AD T+++W V L+ ++Q
Sbjct: 460 PSICFYTFLNAYQG-LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLR-----SVKQASD 513
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
L++ K + DD + D + ++ +GH VY P + LL+ D
Sbjct: 514 LSLIDKES------DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 567
Query: 283 CRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
R+W ++T + GH+ V P V+G HD + W + + + H
Sbjct: 568 VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 627
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLA 400
V HP + A+ SA+ ++ +++ G + + + K I+S+ + G LA
Sbjct: 628 LADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPNGRFLA 686
Query: 401 TGGDNGSLWFWDWKSGH 417
TG +G + WD GH
Sbjct: 687 TGATDGRVLLWD--IGH 701
Score = 187 (70.9 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 54/246 (21%), Positives = 103/246 (41%)
Query: 218 EQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
+++R + +S + + DD + D + ++ +GH VY P + LL+
Sbjct: 503 KKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 562
Query: 278 GRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTML 337
D R+W ++T + GH+ V P V+G HD + W + + +
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 338 TLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
H V HP + A+ SA+ ++ +++ G + + + K I+S+ +
Sbjct: 623 IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGPIHSLTFSPN 681
Query: 397 G-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
G LATG +G + WD GH + G D+ + +L + G L + D
Sbjct: 682 GRFLATGATDGRVLLWD--IGHGLMVGEL---KGHTDT---VCSLRFSRDGEILASGSMD 733
Query: 456 KTIKMW 461
T+++W
Sbjct: 734 NTVRLW 739
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 235 (87.8 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 160 EWHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIE 218
+W W C +V GH +V + + N F + S DRTIK+W + + TL GH +
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 219 QVRGLAVSS--KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLT 276
V + S Y+ S DD+ VK WD + +++ GH V C HP + I++T
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIIT 246
Query: 277 GGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTI 325
G D R+W T +++ G + C R ++ V G + +I
Sbjct: 247 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSN-NVALGYDEGSI 295
Score = 209 (78.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 51/186 (27%), Positives = 84/186 (45%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV-AKGTLKLTLTGHIEQVRGLAVSSK 228
+ H ++R +A + + T S D IK+WD K + GH V + ++ K
Sbjct: 94 MFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPK 153
Query: 229 HTYMF-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
F SA D+ +K W L + + GH GV C+ + D L++G D + ++
Sbjct: 154 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKI 213
Query: 286 WDIRTKMQIFALAGH-DNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
WD + K + GH N C+ F P P ++TGS D T++ W + TL + +
Sbjct: 214 WDYQNKTCVQTPEGHAQNVSCATF-HPELPIIITGSEDGTVRIWHSSTYRLESTLNYGME 272
Query: 345 SVRAMA 350
V +A
Sbjct: 273 RVWCVA 278
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 52/241 (21%), Positives = 99/241 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+SV + W + ++ +W+ TL T VR ++ ++ + D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM---QI 294
D Q++ ++ + + + H + C+ +HPT +LT D + ++WD K Q+
Sbjct: 78 DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQV 137
Query: 295 FALAGHDNTVCSVFTRPTDP-QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHP 353
F GH + V + P D Q + S D TIK W L TL H+K V + +
Sbjct: 138 FE--GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYS 195
Query: 354 TED---CFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWF 410
D + A +K ++ + + + + E ++ TG ++G++
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRI 255
Query: 411 W 411
W
Sbjct: 256 W 256
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 55/273 (20%), Positives = 114/273 (41%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K LT ++V+ + + +M ++ + V W+ E +++++ V
Sbjct: 7 IKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFV 66
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++TG D RV++ T ++ H + + + PT P ++T S D IK W
Sbjct: 67 ARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Query: 329 DL-RYGKTMLTLTHHKKSVRAMALHPTEDC-FASASAEN-IKKFNLPKGEFLHNMLSQQK 385
D + H V + ++P ++ FASAS + IK + L + +K
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 386 TI--INSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYD 443
+ I+ + ++ L +G D+ + WD+ Q +T VQ ++ + ++
Sbjct: 187 GVNCIDYYSGGDKPYLISGADDRLVKIWDY-------QNKTCVQTPEGHAQ-NVSCATFH 238
Query: 444 VTGSRLVTCEADKTIKMWREDETATPETHPLNF 476
++T D T+++W T LN+
Sbjct: 239 PELPIIITGSEDGTVRIWHSSTYRLEST--LNY 269
Score = 41 (19.5 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 29/156 (18%), Positives = 61/156 (39%)
Query: 309 TRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKK 368
T TDP+ + ++ +L+ + ++ + +A C S + E +
Sbjct: 636 TVSTDPE---HRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHH 692
Query: 369 FNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQP 428
G L S +++N +A EG G +N + + + G + +++
Sbjct: 693 AQDYGGLLLLATASGNASMVNKLA---EGAERDGKNNVAFMSY-FLQGKLDACLELLIRT 748
Query: 429 GSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWRED 464
G L EA A +Y + + + +K+WRE+
Sbjct: 749 GRLP-EAAFLARTY-------LPSQVSRVVKLWREN 776
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 226 (84.6 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 78/308 (25%), Positives = 139/308 (45%)
Query: 169 RVISGHLGWVRSVAFD--HSNT---WFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
R ++GH W+ ++++ H+N + + S D +++IWD G + LTGH + V L
Sbjct: 193 RTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCL 252
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG---RD 280
++SA D+ +K W + R+ GH V + L T L TG +
Sbjct: 253 RWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAE 310
Query: 281 SVCRVWDIRTKMQIF---ALAGHDNTVCSVFTRPTDPQ-VVTGSHDSTIKFWDLRYGKTM 336
+ D++ +Q AL+ + N V R P+ +V+GS D T+ W K
Sbjct: 311 ASVNPQDLQGSLQELKERALSRY-NLV-----RGQGPERLVSGSDDFTLFLWSPAEDKKP 364
Query: 337 LT-LTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVN 394
LT +T H+ + + P ASAS + +IK ++ G++L ++ +
Sbjct: 365 LTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 395 EEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEA 454
+ +L +G + +L WD K+ Q + PG D +YA+ + G R+ +
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKA-----QKLAMDLPGHADE---VYAVDWSPDGQRVASGGK 476
Query: 455 DKTIKMWR 462
DK +++WR
Sbjct: 477 DKCLRIWR 484
Score = 197 (74.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 78/307 (25%), Positives = 129/307 (42%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GH V SVAF + + +GS D T++ WD++ T T GH V ++
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVI-RSYHGH---LSGVYCLGLH--PTIDILLTGGR 279
S + S + Q+ WD K + R+ GH ++G+ LH P + + +
Sbjct: 165 SPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSK 224
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D R+WD L GH +V + D + + S D TIK W G TL
Sbjct: 225 DGSVRIWDTTAGRCERILTGHTQSV-TCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTL 283
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQ--QKTIINSMAVNEEG 397
H V MAL T+ + + E + P+ L L + ++ + V +G
Sbjct: 284 QGHGHWVNTMALS-TDYALRTGAFEPAEASVNPQD--LQGSLQELKERALSRYNLVRGQG 340
Query: 398 V--LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEA- 454
L +G D+ +L+ W + + + +L ++ S D SR+V +
Sbjct: 341 PERLVSGSDDFTLFLWS--PAEDKKPLTRMTGHQALINQV---LFSPD---SRIVASASF 392
Query: 455 DKTIKMW 461
DK+IK+W
Sbjct: 393 DKSIKLW 399
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 70/267 (26%), Positives = 108/267 (40%)
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
+L GH E V +A S Y+ S D V+ WDL + GH V + P
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 272 DILLTGGRDSVCRVWDIRTKMQIF-ALAGHDNTVCSVFTRP--TDPQ---VVTGSHDSTI 325
L +G ++ +WD T Q+ LAGH + + P +P+ V + S D ++
Sbjct: 169 RKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSV 228
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQK 385
+ WD G+ LT H +SV + ++++ IK + G L L
Sbjct: 229 RIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG-VLCRTLQGHG 287
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSYDV 444
+N+MA++ + L TG F ++ N Q Q +Q L A Y L
Sbjct: 288 HWVNTMALSTDYALRTGA------FEPAEASVNPQDLQGSLQ--ELKERALSRYNLVRGQ 339
Query: 445 TGSRLVTCEADKTIKMWREDETATPET 471
RLV+ D T+ +W E P T
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLT 366
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/226 (25%), Positives = 92/226 (40%)
Query: 146 SAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGS---ADRTIKIW 202
SA +R W H C R + GH WV ++A ++ TG+ A+ ++
Sbjct: 262 SASQDRTIKVWRA---HDGVLC-RTLQGHGHWVNTMALS-TDYALRTGAFEPAEASVNPQ 316
Query: 203 DVAKGTL---KLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWD-LEQNKVIRSYHGH 258
D+ +G+L K VRG + S DD + W E K + GH
Sbjct: 317 DL-QGSLQELKERALSRYNLVRGQGPER----LVSGSDDFTLFLWSPAEDKKPLTRMTGH 371
Query: 259 LSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVT 318
+ + + P I+ + D ++WD RT + +L GH V + +V+
Sbjct: 372 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVS 431
Query: 319 GSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
GS DST+K WD++ K + L H V A+ P AS +
Sbjct: 432 GSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKD 477
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 217 (81.4 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 64/246 (26%), Positives = 109/246 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R + GH +V V + +GS D T+++WD+ GT GH + V +A S+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSAD 116
Query: 229 HTYMFSAGDDKQVKCWD-LEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRV 285
+ + S DK +K W+ L K H V C+ P I+++ G D + +V
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKV 176
Query: 286 WDIRT-KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
W++ K++ + GH + +V P +G D WDL GK + TL
Sbjct: 177 WNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD- 234
Query: 345 SVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGG 403
++ A+ P +A+ +IK ++L +G+ + + L Q NS A + LA
Sbjct: 235 TINALCFSPNRYWLCAATGPSIKIWDL-EGKIIVDELRQDIITTNSKAEPPQCTSLAWSA 293
Query: 404 DNGSLW 409
D +L+
Sbjct: 294 DGQTLF 299
Score = 178 (67.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 65/303 (21%), Positives = 115/303 (37%)
Query: 171 ISGHLGWVRSVAFDHS-NTWFCTGSADRTIKIWDVAK-----GTLKLTLTGHIEQVRGLA 224
+ GH GWV +A + S D+TI +W + + G + L GH V +
Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 225 VSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
+SS + S D ++ WDL R + GH V + +++G RD +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIK 130
Query: 285 VWD-IRTKMQIFALAGHDNTVCSVFTRP--TDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
+W+ + H V V P ++P +V+ D +K W+L K
Sbjct: 131 LWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIG 190
Query: 342 HKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
H + + + P AS + ++L +G+ L+ L TI N++ +
Sbjct: 191 HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDTI-NALCFSPNRYWL 248
Query: 401 TGGDNGSLWFWDWKSGHNFQQA-QTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIK 459
S+ WD + + Q I+ S +L++ G L D I+
Sbjct: 249 CAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIR 308
Query: 460 MWR 462
+W+
Sbjct: 309 VWQ 311
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 224 (83.9 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 74/306 (24%), Positives = 134/306 (43%)
Query: 169 RVISGHLGWVRSVAFD--HSNT---WFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGL 223
RV++GH W+ ++++ H+N + + S D ++++WD G + LTGH + V L
Sbjct: 144 RVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 203
Query: 224 AVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGG---RD 280
++SA D+ +K W + R+ GH V + L T L TG +
Sbjct: 204 RWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAE 261
Query: 281 SVCRVWDIRTKMQIFALAGHDNTVCSV-FTRPTDPQ-VVTGSHDSTIKFWDLRYGKTMLT 338
+ D++ +Q D + R P+ +V+GS D T+ W K L
Sbjct: 262 ASINAQDLQGSLQELK----DRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLA 317
Query: 339 -LTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEE 396
+T H+ + + P ASAS + +IK ++ G++L ++ + +
Sbjct: 318 RMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 377
Query: 397 GVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADK 456
+L +G + +L WD K+ Q PG D +YA+ + G R+ + DK
Sbjct: 378 RLLVSGSSDSTLKVWDVKA-----QKLAADLPGHADE---VYAVDWSPDGQRVASGGKDK 429
Query: 457 TIKMWR 462
+++WR
Sbjct: 430 CLRIWR 435
Score = 189 (71.6 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 75/306 (24%), Positives = 125/306 (40%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAV 225
+C + GH V SVAF + + +GS D T++ WD++ T T GH V ++
Sbjct: 56 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 115
Query: 226 SSKHTYMFSAGDDKQVKCWDLEQNKVI-RSYHGH---LSGVYCLGLH--PTIDILLTGGR 279
S + S + Q+ WD K + R GH ++G+ LH P + + +
Sbjct: 116 SPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSK 175
Query: 280 DSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
D RVWD L GH +V + D + + S D TIK W G TL
Sbjct: 176 DGSVRVWDTTAGRCERILTGHTQSV-TCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTL 234
Query: 340 THHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQK--TIINSMAVNEEG 397
H V MAL T+ + + E + ++ + L L + K + V +G
Sbjct: 235 QGHGHWVNTMALS-TDYALRTGAFEPAEA-SI-NAQDLQGSLQELKDRALRRYNLVRGQG 291
Query: 398 V--LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEAD 455
L +G D+ +L+ W + + + + +A I + + + + D
Sbjct: 292 PERLVSGSDDFTLFMWS-----PAEDKKPLAR--MTGHQALINQVLFSPDSRIIASASFD 344
Query: 456 KTIKMW 461
K+IK+W
Sbjct: 345 KSIKLW 350
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 68/264 (25%), Positives = 106/264 (40%)
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
+L GH E V +A S Y+ S D V+ WDL + GH V + P
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 119
Query: 272 DILLTGGRDSVCRVWDIRTKMQIF-ALAGHDNTVCSVFTRP--TDPQ---VVTGSHDSTI 325
L +G ++ +WD T Q+ LAGH + + P +P+ + + S D ++
Sbjct: 120 KTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSV 179
Query: 326 KFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQK 385
+ WD G+ LT H +SV + ++++ IK + G L L
Sbjct: 180 RVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG-VLCRTLQGHG 238
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVT 445
+N+MA++ + L TG F ++ N Q Q +Q D Y L
Sbjct: 239 HWVNTMALSTDYALRTGA------FEPAEASINAQDLQGSLQELK-DRALRRYNLVRGQG 291
Query: 446 GSRLVTCEADKTIKMWREDETATP 469
RLV+ D T+ MW E P
Sbjct: 292 PERLVSGSDDFTLFMWSPAEDKKP 315
Score = 144 (55.7 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 57/223 (25%), Positives = 91/223 (40%)
Query: 146 SAIMERIPSKWPRPEWHAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGS---ADRTIKIW 202
SA +R W H C R + GH WV ++A ++ TG+ A+ +I
Sbjct: 213 SASQDRTIKVWRA---HDGVLC-RTLQGHGHWVNTMALS-TDYALRTGAFEPAEASINAQ 267
Query: 203 DVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWD-LEQNKVIRSYHGHLSG 261
D+ +G+L+ L + L + S DD + W E K + GH +
Sbjct: 268 DL-QGSLQ-ELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQAL 325
Query: 262 VYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSH 321
+ + P I+ + D ++WD RT + +L GH V + +V+GS
Sbjct: 326 INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSS 385
Query: 322 DSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE 364
DST+K WD++ K L H V A+ P AS +
Sbjct: 386 DSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKD 428
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 232 (86.7 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 53/188 (28%), Positives = 90/188 (47%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV + + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ I+++G + V R
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLR 193
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V ++ Q ++GS D TI+ W L + + T H +
Sbjct: 194 VWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 253
Query: 345 SVRAMALH 352
V A+ ++
Sbjct: 254 GVWALQVN 261
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ---IFALAGHDNTVCSVFTRPTDPQV 316
+GV L L P ++ L T GRDS+ R+W + Q I ++ H + V + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IK 367
++ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 ISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLT 150
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
+ LS K I S+A+N+ G ++ +G L WD ++ A+ +
Sbjct: 151 ALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTC-----AKLMK 205
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + AL + G++ ++ +D TI++W
Sbjct: 206 LKGHTDN---VKALLLNRDGTQCLSGSSDGTIRLW 237
Score = 162 (62.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 39/164 (23%), Positives = 73/164 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + T +GS ++ +++WD + L GH + V+ L ++ T
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGT 223
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRN 283
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLR 331
+++ + R DP + + ST+ W L+
Sbjct: 284 PDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLK 327
Score = 137 (53.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 51/236 (21%), Positives = 99/236 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDV---AKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
V ++ D + T D I+IW V + ++ H + V + + + S
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLIS 92
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
A D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 ASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTAL 152
Query: 295 FA---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
A L+G+ +++ S+ +V+GS + ++ WD R ++ L H +
Sbjct: 153 TASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDN 212
Query: 346 VRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V+A+ L+ C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 VKALLLNRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 257
Score = 39 (18.8 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWD 412
+II +N++ L T N ++ +WD
Sbjct: 362 SIIQCHILNDKRHLLTKDTNNNVAYWD 388
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 219 (82.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 58/196 (29%), Positives = 90/196 (45%)
Query: 164 PWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT-LTGHIEQVRG 222
P + R ++ H G++ F + T S D T +WDV GT K+T + H V
Sbjct: 139 PIRVCRELNSHTGYLSCCRFLNDRQ-IVTSSGDMTCILWDVENGT-KITEFSDHNGDVMS 196
Query: 223 LAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSV 282
++VS Y S D K WDL K ++++ GH + + + P TG D+
Sbjct: 197 VSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDAS 256
Query: 283 CRVWDIRTKMQIFALAGHDNTVC---SVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
CR++DIR ++ HDN +C SV + + G D T WD G+ +L+L
Sbjct: 257 CRLFDIRADRELMQYT-HDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSL 315
Query: 340 THHKKSVRAMALHPTE 355
T H V + + PT+
Sbjct: 316 TGHGNRVSCLGV-PTD 330
Score = 202 (76.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 49/160 (30%), Positives = 73/160 (45%)
Query: 172 SGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTY 231
S H G V SV+ +F +G+ D T K+WD+ G T TGH + +
Sbjct: 188 SDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLS 247
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSY-HGH-LSGVYCLGLHPTIDILLTGGRDSVCRVWDIR 289
+ DD + +D+ ++ + Y H + L G+ +G + L G D C VWD
Sbjct: 248 FGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTL 307
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVV-TGSHDSTIKFW 328
++ +L GH N V S PTD + TGS DS +K W
Sbjct: 308 KGERVLSLTGHGNRV-SCLGVPTDGMALCTGSWDSLLKIW 346
Score = 189 (71.6 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 63/266 (23%), Positives = 117/266 (43%)
Query: 206 KGTLKL--TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWD-LEQNKVIRSYHGHLSGV 262
+G +K+ L GH+ ++ + + + ++ SA D ++ WD L NKV + S V
Sbjct: 49 EGKIKVRRNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKV-HAIPLRSSWV 107
Query: 263 YCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFA----LAGHDNTV-CSVFTRPTDPQVV 317
PT + + GG D++C ++++R++ Q L H + C F D Q+V
Sbjct: 108 MTCAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLN--DRQIV 165
Query: 318 TGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFNLPKGEF 376
T S D T WD+ G + + H V ++++ P ++ F S + + K ++L G+
Sbjct: 166 TSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKC 225
Query: 377 LHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA 435
+ + I N++ G+ TG D+ S +D ++ Q L
Sbjct: 226 VQTFTGHEADI-NAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQ---YTHDNIL---C 278
Query: 436 GIYALSYDVTGSRLVTCEADKTIKMW 461
GI ++ + +G L D T +W
Sbjct: 279 GITSVGFSFSGRFLFAGYDDFTCNVW 304
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/169 (20%), Positives = 72/169 (42%)
Query: 177 WVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLT----LTGHIEQVRGLAVSSKHTYM 232
WV + A+ + + G D I+++ + L H + + +
Sbjct: 106 WVMTCAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIV 165
Query: 233 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKM 292
S+GD + WD+E I + H V + + P + ++G D+ ++WD+R+
Sbjct: 166 TSSGDMTCI-LWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGK 224
Query: 293 QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTH 341
+ GH+ + +V P TGS D++ + +D+R + ++ TH
Sbjct: 225 CVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYTH 273
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 233 (87.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV V + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 74 HTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ I+++G + V R
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLR 193
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V ++ Q ++GS D TI+ W L + + T H +
Sbjct: 194 VWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 253
Query: 345 SVRAMALH 352
V A+ ++
Sbjct: 254 GVWALQVN 261
Score = 176 (67.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 57/215 (26%), Positives = 98/215 (45%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ---IFALAGHDNTVCSVFTRPTDPQV 316
+GV L L P ++ L T GRDS+ R+W + Q I ++ H + V V +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTL 90
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IK 367
++ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 ISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLT 150
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
+ LS K I S+A+N+ G ++ +G L WD ++ A+ +
Sbjct: 151 ALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTC-----AKLMK 205
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + AL G++ ++ +D TI++W
Sbjct: 206 LKGHTDN---VKALLLHRDGTQCLSGSSDGTIRLW 237
Score = 160 (61.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 39/164 (23%), Positives = 72/164 (43%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + T +GS ++ +++WD + L GH + V+ L + T
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGT 223
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRN 283
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLR 331
+++ + R DP + + ST+ W L+
Sbjct: 284 PDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLK 327
Score = 143 (55.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 52/236 (22%), Positives = 99/236 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDV---AKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
V ++ D + T D I+IW V + ++ H + V + + + S
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLIS 92
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
A D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 ASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTAL 152
Query: 295 FA---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
A L+G+ +++ S+ +V+GS + ++ WD R ++ L H +
Sbjct: 153 TASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDN 212
Query: 346 VRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V+A+ LH C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 VKALLLHRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 257
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWD 412
+II +N++ + T N ++ +WD
Sbjct: 362 SIIQCHILNDKRHILTKDTNNNVAYWD 388
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 233 (87.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV V + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 74 HTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ I+++G + V R
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLR 193
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V ++ Q ++GS D TI+ W L + + T H +
Sbjct: 194 VWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 253
Query: 345 SVRAMALH 352
V A+ ++
Sbjct: 254 GVWALQVN 261
Score = 176 (67.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 57/215 (26%), Positives = 98/215 (45%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ---IFALAGHDNTVCSVFTRPTDPQV 316
+GV L L P ++ L T GRDS+ R+W + Q I ++ H + V V +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTL 90
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IK 367
++ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 ISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLT 150
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
+ LS K I S+A+N+ G ++ +G L WD ++ A+ +
Sbjct: 151 ALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTC-----AKLMK 205
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + AL G++ ++ +D TI++W
Sbjct: 206 LKGHTDN---VKALLLHRDGTQCLSGSSDGTIRLW 237
Score = 160 (61.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 39/164 (23%), Positives = 72/164 (43%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + T +GS ++ +++WD + L GH + V+ L + T
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGT 223
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRN 283
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLR 331
+++ + R DP + + ST+ W L+
Sbjct: 284 PDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLK 327
Score = 143 (55.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 52/236 (22%), Positives = 99/236 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDV---AKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
V ++ D + T D I+IW V + ++ H + V + + + S
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLIS 92
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
A D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 ASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTAL 152
Query: 295 FA---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
A L+G+ +++ S+ +V+GS + ++ WD R ++ L H +
Sbjct: 153 TASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDN 212
Query: 346 VRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V+A+ LH C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 VKALLLHRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 257
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWD 412
+II +N++ + T N ++ +WD
Sbjct: 362 SIIQCHILNDKRHILTKDTNNNVAYWD 388
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 217 (81.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 74/311 (23%), Positives = 135/311 (43%)
Query: 174 HLGWVRSVA--FDHSNTWFCTGSADRTIKIWDVAK-----GTLKLTLTGHIEQVRGLAVS 226
H V ++A D+S+ T S D++I +W + K G + +TGH V+ + +S
Sbjct: 14 HTDMVTAIATPVDNSDV-IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Query: 227 SKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
S + S D +++ WDL + R + GH V + +++ RD ++W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 287 DI--RTKMQIFALAGHDNTVCSVFTRPTD--PQVVTGSHDSTIKFWDLRYGKTMLTLTHH 342
+ K I GH V V P P +V+ S D T+K W+L+ K TL H
Sbjct: 133 NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH 192
Query: 343 KKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLAT 401
+ +A+ P AS + I ++L +G+ L+++ + +II+S+ +
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGSIIHSLCFSPNRYWLC 250
Query: 402 GGDNGSLWFWDWKSGHNFQQAQTIVQPGS--LDSEAGI-------Y--ALSYDVTGSRLV 450
S+ WD +S + + ++ + D GI Y +L++ G+ L
Sbjct: 251 AATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLNWSADGNTLF 310
Query: 451 TCEADKTIKMW 461
+ D I++W
Sbjct: 311 SGYTDGVIRVW 321
Score = 207 (77.9 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 51/207 (24%), Positives = 92/207 (44%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
R ++GH +V+ V + +GS D +++WD+A G GH + V +A S+
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 229 HTYMFSAGDDKQVKCWDL--EQNKVIRSYHGHLSGVYCLGLHPT--IDILLTGGRDSVCR 284
+ + SA D+ +K W+ E I GH V C+ P + +++ D +
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VW+++ LAGH + +V P +G D I WDL GK + +L
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL-EAGS 235
Query: 345 SVRAMALHPTEDCFASASAENIKKFNL 371
+ ++ P +A+ +I+ ++L
Sbjct: 236 IIHSLCFSPNRYWLCAATENSIRIWDL 262
Score = 107 (42.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 166 KCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGHIEQVRGLA 224
K ++GH G++ +VA + +G D I +WD+A+G +L G I + L
Sbjct: 184 KLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI--IHSLC 241
Query: 225 VSSKHTYMFSAGDDKQVKCWDLEQNKVI 252
S Y A + ++ WDLE V+
Sbjct: 242 FSPNR-YWLCAATENSIRIWDLESKSVV 268
Score = 52 (23.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 262 VYCLGLHPTID--ILLTGGRDSVCRVWDI 288
+YC L+ + D L +G D V RVW I
Sbjct: 295 IYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 224 (83.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 59/245 (24%), Positives = 111/245 (45%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+ GH V SV + + + S+D TI++W V G + H V GL++ +
Sbjct: 261 LKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATGD 320
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSG--VYCLGLHPTIDILLTGGRDSVCRVWDI 288
Y+ S+ +D+ D++ +V+ +G + C HP I TG DS ++WD+
Sbjct: 321 YLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDL 380
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLT-HHKKSVR 347
+ + + GH V ++ + TG+ DS++K WDLR K T+T + V+
Sbjct: 381 KERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNNYEVK 440
Query: 348 AMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNG 406
++ + + + +I+ + + + N S ++ +A E LA+ G +
Sbjct: 441 SLVFDQS-GTYLAVGGSDIRVYICKQWSEVLNF-SDHSGLVTGVAFGEHAQFLASTGMDR 498
Query: 407 SLWFW 411
SL F+
Sbjct: 499 SLKFY 503
Score = 200 (75.5 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 58/241 (24%), Positives = 102/241 (42%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
TG AD+ + ++D + + TL GH ++V + +FSA D ++ W +
Sbjct: 240 TGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNC 299
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
++ H S V L LH T D LL+ D DI+T ++ + C++
Sbjct: 300 VQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTG-RVLTKVTDETAGCALTCAQ 358
Query: 312 TDPQVV---TGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IK 367
P + TG+ DS IK WDL+ + H V A+A A+ + ++ +K
Sbjct: 359 FHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLK 418
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGSLWFW-DWKSGHNFQQAQTI 425
++L K + + + S+ ++ G LA GG + ++ W NF +
Sbjct: 419 LWDLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFSDHSGL 478
Query: 426 V 426
V
Sbjct: 479 V 479
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 62/232 (26%), Positives = 105/232 (45%)
Query: 238 DKQVKCWDLEQNKVIRSYHG-H---LSGVYCLGLHPT-IDILLTGGRDSVCRVWDIRTKM 292
++ V+ DL + + + S+ G H + G+ L L PT + +LTGG D V+D R +
Sbjct: 197 EELVRAEDLSKYRQVGSHAGLHSASVPGILSLDLCPTDTNKVLTGGADKNVVVFDRREEQ 256
Query: 293 QIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALH 352
+ L GH V SV P V + S DSTI+ W + G + + H+ +V ++LH
Sbjct: 257 IVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLH 316
Query: 353 PTEDCFASASAENIKKFN-LPKGEFLHNMLSQQKTIINSMA-VNEEGVL-ATGGDNGSLW 409
T D S+S + F+ + G L + + + A + +G++ TG + +
Sbjct: 317 ATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIK 376
Query: 410 FWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
WD K N PG + A+++ G L T D ++K+W
Sbjct: 377 IWDLKERTNVANF-----PGH---SGPVTAIAFSENGYYLATGAQDSSLKLW 420
Score = 186 (70.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 56/239 (23%), Positives = 108/239 (45%)
Query: 232 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTK 291
+ + G DK V +D + +++ + GH V + HP ++ + DS RVW +
Sbjct: 238 VLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGG 297
Query: 292 MQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK--SVRAM 349
+ + H++ V + T +++ S D F D++ G+ + +T ++
Sbjct: 298 NCVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCA 357
Query: 350 ALHPTEDCFASASAEN-IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGV-LATGGDNGS 407
HP F + + ++ IK ++L + + N + ++A +E G LATG + S
Sbjct: 358 QFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPV-TAIAFSENGYYLATGAQDSS 416
Query: 408 LWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTI---KMWRE 463
L WD + NF+ TI +LD+ + +L +D +G+ L +D + K W E
Sbjct: 417 LKLWDLRKLKNFK---TI----TLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSE 468
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 40/143 (27%), Positives = 60/143 (41%)
Query: 190 FCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQN 249
F TG+ D IKIWD+ + T GH V +A S Y+ + D +K WDL +
Sbjct: 366 FGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLRKL 425
Query: 250 KVIRSYH-GHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSV- 307
K ++ + V L + L GG D RV+ + ++ + H V V
Sbjct: 426 KNFKTITLDNNYEVKSLVFDQSGTYLAVGGSD--IRVYICKQWSEVLNFSDHSGLVTGVA 483
Query: 308 FTRPTDPQVVTGSHDSTIKFWDL 330
F TG D ++KF+ L
Sbjct: 484 FGEHAQFLASTGM-DRSLKFYSL 505
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 233 (87.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 66/237 (27%), Positives = 102/237 (43%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
VR+ F W GS D I++++ G + H + +R +AV Y+ S D
Sbjct: 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 238 DKQVKCWDLEQNKVI-RSYHGHLSGVYCLGLHPTIDILLTGG-RDSVCRVWDIRTKMQIF 295
D VK W+ E N + +++ GH V C+ +P G D +VW + F
Sbjct: 118 DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177
Query: 296 ALA-GHDNTVCSV--FTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALH 352
L G + V V + P P ++T S D TIK WD + + TL H +V H
Sbjct: 178 TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237
Query: 353 PTEDCFASASAEN-IKKFNLP--KGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNG 406
PT S S + +K +N K E N+ ++ I + + +A+G DNG
Sbjct: 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294
Score = 215 (80.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 56/186 (30%), Positives = 88/186 (47%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKG-TLKLTLTGHIEQVRGLAVSSKHTYM 232
H ++RS+A + + +GS D T+K+W+ L+ T GH V +A + K
Sbjct: 96 HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155
Query: 233 FSAGD-DKQVKCWDLEQNKV-IRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRVWDI 288
F++G D+ VK W L Q+ G GV + +P D ++T D ++WD
Sbjct: 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215
Query: 289 RTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRA 348
+TK + L GH + V PT P +++GS D T+K W+ K TL +
Sbjct: 216 QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275
Query: 349 MALHPT 354
+A HPT
Sbjct: 276 IATHPT 281
Score = 214 (80.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 48/159 (30%), Positives = 78/159 (49%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFDHSN-TWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W W + GH +V VAF+ + + F +G DRT+K+W + + T TLT Q
Sbjct: 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT--TGQ 183
Query: 220 VRGLAVSSKHT-----YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDIL 274
RG+ + YM +A DD +K WD + + + GH+S V HPT+ I+
Sbjct: 184 ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII 243
Query: 275 LTGGRDSVCRVWDIRT-KMQIFALAGHDNTVCSVFTRPT 312
++G D ++W+ T K++ G + + C + T PT
Sbjct: 244 ISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC-IATHPT 281
Score = 145 (56.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 44/241 (18%), Positives = 98/241 (40%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGD 237
V+ + F + W T +++W+ ++ VR ++ ++ D
Sbjct: 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD 75
Query: 238 DKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIF-A 296
D +++ ++ + + + H + + +HPT +L+G D ++W+ +
Sbjct: 76 DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135
Query: 297 LAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTMLTLTH-HKKSVRAMALHPT 354
GH++ V V P DP +G D T+K W L TLT ++ V + +P
Sbjct: 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195
Query: 355 ED--CFASASAE-NIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFW 411
D +AS + IK ++ + + + ++ ++ +G ++G+L W
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 412 D 412
+
Sbjct: 256 N 256
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 51/269 (18%), Positives = 118/269 (43%)
Query: 209 LKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLH 268
+K T + ++V+G+ ++ + +V+ W+ E +RS + V
Sbjct: 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFI 64
Query: 269 PTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ ++ G D RV++ T ++ H + + S+ PT P V++GS D T+K W
Sbjct: 65 ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLW 124
Query: 329 DLRYGKTM-LTLTHHKKSVRAMALHPTE-DCFASASAEN-IKKFNLPKGEFLHNMLSQQK 385
+ + T H+ V +A +P + FAS + +K ++L + + + Q+
Sbjct: 125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE 184
Query: 386 TIINSM---AVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSY 442
+N + + ++ + T D+ ++ WD+++ ++ G + + + +A+ +
Sbjct: 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-----KSCVATLEGHMSNVS--FAV-F 236
Query: 443 DVTGSRLVTCEADKTIKMWREDETATPET 471
T +++ D T+K+W +T
Sbjct: 237 HPTLPIIISGSEDGTLKIWNSSTYKVEKT 265
Score = 40 (19.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 397 GVLATGGDNGSLWFWDWKSG 416
G L +G ++F+DW +G
Sbjct: 442 GALLGVKSDGFVYFFDWDNG 461
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 228 (85.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 161 WHAPWKCYRVISGHLGWVRSVAFD-HSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQ 219
W W C RV GH +V + F+ N F + S DRT+K+W + TL GH +
Sbjct: 128 WEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKG 187
Query: 220 VRGLAV--SSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTG 277
V + Y+ S DD+ VK WD + +++ GH + + HP + I+LTG
Sbjct: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTG 247
Query: 278 GRDSVCRVW 286
D R+W
Sbjct: 248 SEDGTVRIW 256
Score = 198 (74.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 48/159 (30%), Positives = 73/159 (45%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAK-GTLKLTLTGHIEQVRGLAVSSKHTYM 232
H ++R +A + T S D IK+W+ K + GH V + + K
Sbjct: 98 HSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNT 157
Query: 233 F-SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTID--ILLTGGRDSVCRVWDIR 289
F SA D+ VK W L N + GH GV C+ + D L++G D + ++WD +
Sbjct: 158 FASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
Query: 290 TKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
K + L GH + +V P P V+TGS D T++ W
Sbjct: 218 NKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIW 256
Score = 187 (70.9 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 48/182 (26%), Positives = 84/182 (46%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKL--TLTGHIEQVRGLAVSSKHTYMFSA 235
VRS F W TGS D I++++ TL+ + H + +R +AV + ++
Sbjct: 60 VRSARFVARKNWILTGSDDMQIRVFNY--NTLEKVHSFEAHSDYLRCIAVHPTQPLVLTS 117
Query: 236 GDDKQVKCWDLEQNKVI-RSYHGHLSGVYCLGLHPTID-ILLTGGRDSVCRVWDIRTKMQ 293
DD +K W+ E+ R + GH V + +P + + D +VW + +
Sbjct: 118 SDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFA 177
Query: 294 IFALAGHDNTV-CSVFTRPTD-PQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMAL 351
F L GH+ V C + D P +++G+ D +K WD + + TL H +++ A+
Sbjct: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCF 237
Query: 352 HP 353
HP
Sbjct: 238 HP 239
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/199 (21%), Positives = 90/199 (45%)
Query: 220 VRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGR 279
VR ++ ++ + DD Q++ ++ + + S+ H + C+ +HPT ++LT
Sbjct: 60 VRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSD 119
Query: 280 DSVCRVWDIRTKMQIF--ALAGHDNTVCSVFTRPTDPQV-VTGSHDSTIKFWDLRYGKTM 336
D + ++W+ KM GH + V + P D + S D T+K W L
Sbjct: 120 DMLIKLWNWE-KMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFAN 178
Query: 337 LTLTHHKKSVRAMAL-HPTEDCFASASAEN--IKKFNLPKGEFLHNMLSQQKTIINSMAV 393
TL H+K V + H + + + A++ +K ++ + + + I +++
Sbjct: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNI-SAVCF 237
Query: 394 NEE-GVLATGGDNGSLWFW 411
+ E ++ TG ++G++ W
Sbjct: 238 HPELPIVLTGSEDGTVRIW 256
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 227 (85.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 59/215 (27%), Positives = 95/215 (44%)
Query: 165 WKCYRVISGHLGWVRSVAF---DHSN--TWFCTGSADRTIKIWDVAKGTLKL-------- 211
+KC V +GH V +VA D + T+ + S DRT+K +++ K
Sbjct: 400 YKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVW 459
Query: 212 TLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTI 271
T+ H V + VS + SA DK +K WD +V+ GH GV+ +P
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFS 519
Query: 272 DILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
L +G D R+W++ T+ + L GH + + QVV+ + D +K W L
Sbjct: 520 RQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLS 579
Query: 332 YGKTMLTLTHHKKSVRAMALHPTEDCFASASAENI 366
G+ + TL +H+ V A+A S A+ +
Sbjct: 580 SGECVATLDNHEDRVWALASRFDGSLLVSGGADAV 614
Score = 221 (82.9 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 60/243 (24%), Positives = 107/243 (44%)
Query: 181 VAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQ 240
VAFD + T DR I L + V LA++S + +A +
Sbjct: 25 VAFDSNEKILVTALTDRIIGTRSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRL 84
Query: 241 VKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGH 300
+ +++ + I+S H + V + + PT +L TGG + + +VWDI + GH
Sbjct: 85 LTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGH 144
Query: 301 DNTVCSV-FTRPTDPQVV-TGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCF 358
+ ++ F + + V+ +G+ DS ++ WDL ++M H +R + PT
Sbjct: 145 GGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFL 204
Query: 359 ASASAEN-IKKFNLPKGEFLHNM--LSQQKTI--INSMAVNEEGVLATGGDNGSLWFWDW 413
S S + ++ +N+ K + + + I +N EE +L T G+ + WDW
Sbjct: 205 LSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQP--EEKILYTAGEGNLILAWDW 262
Query: 414 KSG 416
KSG
Sbjct: 263 KSG 265
Score = 185 (70.2 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 44/195 (22%), Positives = 87/195 (44%)
Query: 177 WVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAG 236
+V ++A + R + I+++ G ++ H V + + +T + + G
Sbjct: 63 YVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGG 122
Query: 237 DDKQVKCWDLEQNKVIRSYHGHLSGVY---CLGLHPTIDILLTGGRDSVCRVWDIRTKMQ 293
+ VK WD+ V S+ GH GV C G H +L +G DS R+WD+ +
Sbjct: 123 AEGLVKVWDIAGAYVTHSFRGH-GGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRS 181
Query: 294 IFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLT--HHKKSVRAMAL 351
+ GH + + + PT +++GS D T++ W+++ + T+ H +++ +
Sbjct: 182 MAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNG 241
Query: 352 HPTEDCFASASAENI 366
P E +A N+
Sbjct: 242 QPEEKILYTAGEGNL 256
Score = 171 (65.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 60/271 (22%), Positives = 121/271 (44%)
Query: 213 LTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDL--EQN--KVIRSYHGHLSGVYCLGLH 268
L GH + V L S ++ + D V+ W+L E N K I + GH + V + L
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALG 419
Query: 269 PTIDI------LLTGGRDSVCRVWDIRTKMQ--------IFALAGHDNTVCSVFTRPTDP 314
P +D+ L + +D + +++ +++ ++ + HD V ++
Sbjct: 420 P-LDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGR 478
Query: 315 QVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPK 373
+ + S D TIK WD G+ + L H++ V A + +P AS S + I+ +N+
Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDT 538
Query: 374 GEFLHNMLSQQKTIINSMAVNEEGVLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDS 433
+ + + I+ + +++ + + +G + W SG + + +LD+
Sbjct: 539 QQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG------ECVA---TLDN 589
Query: 434 -EAGIYALSYDVTGSRLVTCEADKTIKMWRE 463
E ++AL+ GS LV+ AD + +W++
Sbjct: 590 HEDRVWALASRFDGSLLVSGGADAVVSVWKD 620
Score = 159 (61.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 38/117 (32%), Positives = 57/117 (48%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKH 229
V+ GH V + +F+ + +GS DRTI+IW+V TL GH + L S+
Sbjct: 502 VLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQG 561
Query: 230 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVW 286
T + SA D VK W L + + + H V+ L +L++GG D+V VW
Sbjct: 562 TQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/158 (20%), Positives = 70/158 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
I H V ++ + S D+TIK+WD + G + L GH V + +
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSR 520
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
+ S D+ ++ W+++ + +++ GH + L +++ D + +VW + +
Sbjct: 521 QLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSS 580
Query: 291 KMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFW 328
+ L H++ V ++ +R +V+G D+ + W
Sbjct: 581 GECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/228 (22%), Positives = 101/228 (44%)
Query: 214 TGHIEQVRGLA-----VSSKHTYMFSAGDDKQVKCWDLEQ--------NKVIRSYHGHLS 260
TGH V +A V+ T++ S+ D+ +K ++L N+ + + H
Sbjct: 407 TGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDR 466
Query: 261 GVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGS 320
V + + I+ + +D ++WD T + L GH V + P Q+ +GS
Sbjct: 467 DVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGS 526
Query: 321 HDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN-IKKFNLPKGEFLHN 379
D TI+ W++ + + TL H ++ + SA+A+ +K ++L GE +
Sbjct: 527 GDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVAT 586
Query: 380 MLSQQKTIINSMAVNEEG-VLATGGDNGSLWFW-DWKSGHNFQQAQTI 425
L + + ++A +G +L +GG + + W D + +QA+ +
Sbjct: 587 -LDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEEL 633
Score = 120 (47.3 bits), Expect = 0.00078, P = 0.00078
Identities = 41/206 (19%), Positives = 92/206 (44%)
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALA-GHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLR 331
IL+T D + T ++F++ D+ V ++ +++ + +++
Sbjct: 33 ILVTALTDRIIGTRS-ETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIP 91
Query: 332 YGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSM 391
G+ + ++ H+ V M + PT A+ AE + K G ++ + +I+++
Sbjct: 92 SGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISAL 151
Query: 392 AVNEEG---VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALSYDVTGSR 448
+ VLA+G D+ + WD S ++ + + S + I L+++ TGS
Sbjct: 152 CFGKHQNTWVLASGADDSRVRLWDLNSS----RSMAVFEGHS----SVIRGLTFEPTGSF 203
Query: 449 LVTCEADKTIKMWREDETATPETHPL 474
L++ DKT+++W + + T P+
Sbjct: 204 LLSGSRDKTVQVWNIKKRSAVRTIPV 229
Score = 109 (43.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 44/192 (22%), Positives = 83/192 (43%)
Query: 293 QIFA-LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYG----KTMLTLTHHKKSVR 347
Q+F L GH + V ++ + + TG+ D+T++ W+L K + T H SV
Sbjct: 355 QVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVT 414
Query: 348 AMALHPTE----DCFASASAEN--IKKFNLPKGEFLHNMLSQQKTIINSMAVNEE-GVLA 400
A+AL P + F ++S+++ +K+FNL G L+ + + A + + +
Sbjct: 415 AVALGPLDVNGYPTFLASSSQDRTLKRFNL--GSQLNKSDFSNRAVWTIKAHDRDVNAIQ 472
Query: 401 TGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLDSEA-GIYALSYDVTGSRLVTCEADKTIK 459
D + + T G L G++A S++ +L + D+TI+
Sbjct: 473 VSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIR 532
Query: 460 MWREDETATPET 471
+W D +T
Sbjct: 533 IWNVDTQQCVQT 544
Score = 100 (40.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 18/78 (23%), Positives = 42/78 (53%)
Query: 170 VISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTL-TGH-IEQVRGLAVSS 227
V GH +R + F+ + ++ +GS D+T+++W++ K + T+ H +E + +
Sbjct: 184 VFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQP 243
Query: 228 KHTYMFSAGDDKQVKCWD 245
+ +++AG+ + WD
Sbjct: 244 EEKILYTAGEGNLILAWD 261
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 307 VFTRPTDPQVVTGSHD 322
V T P P +TG+ D
Sbjct: 675 VMTAPHQPNSITGNKD 690
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 55/223 (24%), Positives = 101/223 (45%)
Query: 168 YRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSS 227
++ GH G V +F + + + S D T ++W + + + GH V ++ S
Sbjct: 672 FKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSP 731
Query: 228 KHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWD 287
Y +A D+ + W +R + GHLS + HP I+ L TG D R+W+
Sbjct: 732 FGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWE 791
Query: 288 IRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVR 347
I+T + GH + +V P + T D+++ WDL GK + + H K V
Sbjct: 792 IQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVY 851
Query: 348 AMALHPTEDCFASASAE-NIKKFNLPKGEFLHNMLSQQKTIIN 389
++ AS S++ ++ +++ K F ++ +Q ++IN
Sbjct: 852 SLDFSCDGSILASGSSDCTVRLWDVKKA-FNSSLSTQPSSLIN 893
Score = 197 (74.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 57/242 (23%), Positives = 103/242 (42%)
Query: 192 TGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQVKCWDLEQNKV 251
+GS+ + K+ K + T GH V G + S Y+ S +D + W +E
Sbjct: 654 SGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSN 713
Query: 252 IRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRP 311
+ Y GH V+ + P T D R+W + GH + +V P
Sbjct: 714 LVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHP 773
Query: 312 TDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-NIKKFN 370
+ TGS+D + + W+++ GK + H+ + +A P A+A + ++ ++
Sbjct: 774 NINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWD 833
Query: 371 LPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPG 429
L G+ + M K + S+ + +G +LA+G + ++ WD K N + QP
Sbjct: 834 LSTGKKVKKMDGHTKCVY-SLDFSCDGSILASGSSDCTVRLWDVKKAFN---SSLSTQPS 889
Query: 430 SL 431
SL
Sbjct: 890 SL 891
Score = 190 (71.9 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 49/218 (22%), Positives = 95/218 (43%)
Query: 247 EQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCS 306
++ +++ GH VY P LL+ D+ R+W + T + GH+ V
Sbjct: 667 QKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWD 726
Query: 307 VFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAE-N 365
V P T SHD T + W + + T H + HP + A+ S + +
Sbjct: 727 VSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKS 786
Query: 366 IKKFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQT 424
+ + + G+ + + + I ++A + +G +LAT G++ S+ WD +G ++
Sbjct: 787 ARLWEIQTGKCVRIFMGHRAPIY-TVAFSPDGRLLATAGEDTSVILWDLSTGKKVKK--- 842
Query: 425 IVQPGSLDSEAG-IYALSYDVTGSRLVTCEADKTIKMW 461
+D +Y+L + GS L + +D T+++W
Sbjct: 843 ------MDGHTKCVYSLDFSCDGSILASGSSDCTVRLW 874
Score = 42 (19.8 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 227 SKHTYMFSAG-DDKQVKCWDLEQNK 250
SK + + G D VK W+L++ K
Sbjct: 567 SKDAQLVAGGFSDSSVKIWNLKEMK 591
Score = 40 (19.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 162 HAPWKCYRVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDV 204
H P C+ I + + G +D ++KIW++
Sbjct: 545 HLPSICFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIWNL 587
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 54/158 (34%), Positives = 77/158 (48%)
Query: 185 HSNT-W--FCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMFSAGDDKQV 241
HSN+ W +GS D T+++WD A G+L+ TL GH V +A S + S DK V
Sbjct: 702 HSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTV 761
Query: 242 KCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQIFALAGHD 301
+ WD + ++ GH + V + P +L +G D R+WD T L GH
Sbjct: 762 RLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHS 821
Query: 302 NTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTL 339
+TV SV P + +GS D T++ WD G TL
Sbjct: 822 DTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTL 859
Score = 209 (78.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 43/122 (35%), Positives = 62/122 (50%)
Query: 169 RVISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSK 228
+ + GH GWV SVAF +GS D+T+++WD A G+L+ TL GH VR +A S
Sbjct: 731 QTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPD 790
Query: 229 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDI 288
+ S DK V+ WD + ++ GH V + P +L +G D R+WD
Sbjct: 791 GRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDP 850
Query: 289 RT 290
T
Sbjct: 851 AT 852
Score = 167 (63.8 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 47/160 (29%), Positives = 72/160 (45%)
Query: 273 ILLTGGRDSVCRVWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRY 332
+L +G D R+WD T L GH V SV P + +GS D T++ WD
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 333 GKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMA 392
G TL H VR++A P AS S + + P L L + S+A
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA 828
Query: 393 VNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSL 431
+ +G +LA+G + ++ WD +G QQ T++ G++
Sbjct: 829 FSPDGRLLASGSFDKTVRLWDPATG-TLQQ--TLIIKGTV 865
Score = 143 (55.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 57/216 (26%), Positives = 97/216 (44%)
Query: 262 VYCLGL--HPTIDILLTGGRDS----VCRVWDIRTKM--QIFALAGHDNTVCSVFTRPTD 313
+YC GL P ++ + + +C++ + K ++ L GH N+V +V
Sbjct: 656 IYCAGLVFAPQTALIRSNFSEDLPSWICQLPKVNEKWGAELQTLEGHSNSVWAV------ 709
Query: 314 PQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAENIKKFNLPK 373
+ +GS D T++ WD G TL H V ++A P AS S + + P
Sbjct: 710 --LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 374 GEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIVQPGSLD 432
L L + S+A + +G +LA+G + ++ WD +G + QQ T+ G D
Sbjct: 768 TGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATG-SLQQ--TL--RGHSD 822
Query: 433 SEAGIYALSYDVTGSRLVTCEADKTIKMWREDETAT 468
+ + A S D G L + DKT+++W + T T
Sbjct: 823 TVRSV-AFSPD--GRLLASGSFDKTVRLW-DPATGT 854
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 232 (86.7 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 53/188 (28%), Positives = 90/188 (47%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV + + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ I+++G + V R
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLR 193
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V ++ Q ++GS D TI+ W L + + T H +
Sbjct: 194 VWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 253
Query: 345 SVRAMALH 352
V A+ ++
Sbjct: 254 GVWALQVN 261
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ---IFALAGHDNTVCSVFTRPTDPQV 316
+GV L L P ++ L T GRDS+ R+W + Q I ++ H + V + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IK 367
++ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 ISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLT 150
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
+ LS K I S+A+N+ G ++ +G L WD ++ A+ +
Sbjct: 151 ALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTC-----AKLMK 205
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + AL + G++ ++ +D TI++W
Sbjct: 206 LKGHTDN---VKALLLNRDGTQCLSGSSDGTIRLW 237
Score = 162 (62.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/164 (23%), Positives = 73/164 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + T +GS ++ +++WD + L GH + V+ L ++ T
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGT 223
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRN 283
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLR 331
+++ + R DP + + ST+ W L+
Sbjct: 284 PDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLK 327
Score = 137 (53.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 51/236 (21%), Positives = 99/236 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDV---AKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
V ++ D + T D I+IW V + ++ H + V + + + S
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLIS 92
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
A D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 ASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTAL 152
Query: 295 FA---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
A L+G+ +++ S+ +V+GS + ++ WD R ++ L H +
Sbjct: 153 TASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDN 212
Query: 346 VRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V+A+ L+ C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 VKALLLNRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 257
Score = 37 (18.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWD 412
+II +N++ + T N ++ +WD
Sbjct: 362 SIIQCHILNDKRHILTKDTNNNVAYWD 388
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 232 (86.7 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 53/188 (28%), Positives = 90/188 (47%)
Query: 174 HLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHTYMF 233
H WV + + + S+D T+K+W+ KG TL H + V+ LA + +
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 234 SAGDDKQVKCWDLE-------QNKVIR--SYHGHLSGVYCLGLHPTIDILLTGGRDSVCR 284
SAG D+Q+ WD+ N + S G+ +Y L ++ I+++G + V R
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLR 193
Query: 285 VWDIRTKMQIFALAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKK 344
VWD RT ++ L GH + V ++ Q ++GS D TI+ W L + + T H +
Sbjct: 194 VWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 253
Query: 345 SVRAMALH 352
V A+ ++
Sbjct: 254 GVWALQVN 261
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 260 SGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQ---IFALAGHDNTVCSVFTRPTDPQV 316
+GV L L P ++ L T GRDS+ R+W + Q I ++ H + V + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 317 VTGSHDSTIKFWDLRYGKTMLTLTHHKKSVRAMALHPTEDCFASASAEN---------IK 367
++ S D+T+K W+ G M TL HK V+A+A ++ ASA + +
Sbjct: 91 ISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLT 150
Query: 368 KFNLPKGEFLHNMLSQQKTIINSMAVNEEG-VLATGGDNGSLWFWDWKSGHNFQQAQTIV 426
+ LS K I S+A+N+ G ++ +G L WD ++ A+ +
Sbjct: 151 ALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTC-----AKLMK 205
Query: 427 QPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMW 461
G D+ + AL + G++ ++ +D TI++W
Sbjct: 206 LKGHTDN---VKALLLNRDGTQCLSGSSDGTIRLW 237
Score = 162 (62.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/164 (23%), Positives = 73/164 (44%)
Query: 171 ISGHLGWVRSVAFDHSNTWFCTGSADRTIKIWDVAKGTLKLTLTGHIEQVRGLAVSSKHT 230
+SG+ + S+A + T +GS ++ +++WD + L GH + V+ L ++ T
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGT 223
Query: 231 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRT 290
S D ++ W L Q + I +Y H GV+ L ++ + +GGRD D+R
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRN 283
Query: 291 K-MQIFALAGHDNTVCSVFTRPTDPQ--VVTGSHDSTIKFWDLR 331
+++ + R DP + + ST+ W L+
Sbjct: 284 PDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLK 327
Score = 137 (53.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 51/236 (21%), Positives = 99/236 (41%)
Query: 178 VRSVAFDHSNTWFCTGSADRTIKIWDV---AKGTLKLTLTGHIEQVRGLAVSSKHTYMFS 234
V ++ D + T D I+IW V + ++ H + V + + + S
Sbjct: 33 VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLIS 92
Query: 235 AGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLGLHPTIDILLTGGRDSVCRVWDIRTKMQI 294
A D VK W+ + + + H V L +++ + G D +WD+ T +
Sbjct: 93 ASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTAL 152
Query: 295 FA---------LAGHDNTVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGKTMLTLTHHKKS 345
A L+G+ +++ S+ +V+GS + ++ WD R ++ L H +
Sbjct: 153 TASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDN 212
Query: 346 VRAMALHPT-EDCFASASAENIKKFNLPKGEFLHNMLSQQKTIINSMAVNEEGVLA 400
V+A+ L+ C + +S I+ ++L QQ+ I + V++EGV A
Sbjct: 213 VKALLLNRDGTQCLSGSSDGTIRLWSL----------GQQRCIA-TYRVHDEGVWA 257
Score = 37 (18.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 386 TIINSMAVNEEGVLATGGDNGSLWFWD 412
+II +N++ + T N ++ +WD
Sbjct: 362 SIIQCHILNDKRHILTKDTNNNVAYWD 388
WARNING: HSPs involving 1291 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 485 461 0.00096 118 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1541
No. of states in DFA: 626 (67 KB)
Total size of DFA: 318 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 40.37u 0.09s 40.46t Elapsed: 00:00:17
Total cpu time: 40.53u 0.10s 40.63t Elapsed: 00:00:20
Start: Fri May 10 13:01:14 2013 End: Fri May 10 13:01:34 2013
WARNINGS ISSUED: 2