Query 011458
Match_columns 485
No_of_seqs 350 out of 2882
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 08:33:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v76_A Flavoprotein; structura 100.0 2E-74 7E-79 598.3 28.0 380 49-471 26-417 (417)
2 2gqf_A Hypothetical protein HI 100.0 1.8E-70 6.2E-75 566.5 29.2 382 50-473 4-400 (401)
3 2i0z_A NAD(FAD)-utilizing dehy 100.0 5.7E-66 1.9E-70 540.8 32.2 409 48-477 24-445 (447)
4 1y0p_A Fumarate reductase flav 99.9 8.4E-26 2.9E-30 243.3 24.4 377 49-476 125-569 (571)
5 1qo8_A Flavocytochrome C3 fuma 99.9 1.2E-25 4.1E-30 241.7 22.3 378 48-476 119-564 (566)
6 2wdq_A Succinate dehydrogenase 99.9 1.5E-24 5.2E-29 233.8 26.0 353 49-476 6-424 (588)
7 2h88_A Succinate dehydrogenase 99.9 3.4E-24 1.2E-28 231.6 27.8 356 48-476 16-433 (621)
8 2bs2_A Quinol-fumarate reducta 99.9 4.2E-24 1.4E-28 232.4 27.5 349 49-476 4-429 (660)
9 1d4d_A Flavocytochrome C fumar 99.9 1.2E-24 4.2E-29 234.0 19.7 373 49-476 125-570 (572)
10 4at0_A 3-ketosteroid-delta4-5a 99.9 5.9E-24 2E-28 225.8 24.1 370 48-474 39-509 (510)
11 1chu_A Protein (L-aspartate ox 99.9 4.5E-24 1.5E-28 227.9 22.4 351 49-476 7-411 (540)
12 1kf6_A Fumarate reductase flav 99.9 4.3E-22 1.5E-26 215.1 28.2 346 50-475 5-415 (602)
13 3gyx_A Adenylylsulfate reducta 99.9 3.4E-21 1.2E-25 209.5 21.0 198 49-254 21-281 (662)
14 1jnr_A Adenylylsulfate reducta 99.9 4E-20 1.4E-24 201.3 25.1 201 48-255 20-267 (643)
15 3cp8_A TRNA uridine 5-carboxym 99.8 1.3E-21 4.4E-26 209.9 9.5 80 384-479 330-415 (641)
16 3ces_A MNMG, tRNA uridine 5-ca 99.8 7.4E-20 2.5E-24 196.3 19.0 78 384-478 336-420 (651)
17 2e5v_A L-aspartate oxidase; ar 99.8 2.6E-18 8.8E-23 180.5 26.7 178 52-245 1-206 (472)
18 2zxi_A TRNA uridine 5-carboxym 99.8 5.8E-19 2E-23 188.7 15.9 80 384-479 341-426 (637)
19 3nlc_A Uncharacterized protein 99.8 1.9E-18 6.4E-23 183.8 15.8 192 49-255 106-303 (549)
20 4fk1_A Putative thioredoxin re 99.5 6.8E-14 2.3E-18 138.0 13.9 114 48-229 4-117 (304)
21 4gcm_A TRXR, thioredoxin reduc 99.5 5.1E-13 1.7E-17 131.9 18.7 112 49-229 5-116 (312)
22 4a5l_A Thioredoxin reductase; 99.5 3E-14 1E-18 140.6 7.5 119 49-229 3-121 (314)
23 3oz2_A Digeranylgeranylglycero 99.5 5.2E-13 1.8E-17 135.3 14.2 164 50-242 4-172 (397)
24 3dme_A Conserved exported prot 99.4 8E-13 2.7E-17 132.8 14.1 179 50-241 4-220 (369)
25 3nyc_A D-arginine dehydrogenas 99.4 1E-12 3.6E-17 132.8 12.4 183 49-248 8-226 (381)
26 2oln_A NIKD protein; flavoprot 99.4 3.1E-12 1.1E-16 130.6 15.3 175 50-240 4-217 (397)
27 3dje_A Fructosyl amine: oxygen 99.4 5.7E-12 2E-16 130.4 16.9 84 160-257 159-246 (438)
28 4a9w_A Monooxygenase; baeyer-v 99.4 1E-11 3.6E-16 123.9 17.0 128 50-229 3-132 (357)
29 2gf3_A MSOX, monomeric sarcosi 99.4 4.9E-12 1.7E-16 128.5 14.8 172 49-239 2-213 (389)
30 1ryi_A Glycine oxidase; flavop 99.4 4.3E-12 1.5E-16 128.7 14.2 68 160-241 162-229 (382)
31 1y56_B Sarcosine oxidase; dehy 99.4 7.1E-12 2.4E-16 127.1 15.4 182 49-248 4-223 (382)
32 3ps9_A TRNA 5-methylaminomethy 99.4 1E-11 3.5E-16 136.0 17.5 74 160-246 415-488 (676)
33 2gag_B Heterotetrameric sarcos 99.3 9.1E-12 3.1E-16 127.1 15.1 184 48-248 19-246 (405)
34 3pvc_A TRNA 5-methylaminomethy 99.3 4.2E-12 1.4E-16 139.4 12.9 73 160-245 410-483 (689)
35 2zbw_A Thioredoxin reductase; 99.3 9.4E-12 3.2E-16 123.8 13.8 115 50-228 5-120 (335)
36 2uzz_A N-methyl-L-tryptophan o 99.3 3.5E-11 1.2E-15 121.4 13.3 57 161-229 148-204 (372)
37 3nix_A Flavoprotein/dehydrogen 99.2 2.2E-10 7.4E-15 117.7 17.1 155 50-243 5-177 (421)
38 3da1_A Glycerol-3-phosphate de 99.2 1.2E-10 4.1E-15 124.6 15.4 76 159-241 167-242 (561)
39 1rp0_A ARA6, thiazole biosynth 99.2 1.1E-10 3.6E-15 114.1 13.3 141 50-229 39-191 (284)
40 2bry_A NEDD9 interacting prote 99.2 6.1E-12 2.1E-16 132.8 4.7 176 48-266 90-270 (497)
41 3i3l_A Alkylhalidase CMLS; fla 99.2 1.1E-10 3.8E-15 125.5 14.6 155 49-242 22-198 (591)
42 3cgv_A Geranylgeranyl reductas 99.2 1.8E-10 6E-15 117.1 15.1 163 50-242 4-172 (397)
43 1pj5_A N,N-dimethylglycine oxi 99.2 2.6E-10 9E-15 127.6 17.8 185 49-250 3-225 (830)
44 3jsk_A Cypbp37 protein; octame 99.2 1.8E-10 6E-15 114.9 14.5 146 49-230 78-252 (344)
45 3ihg_A RDME; flavoenzyme, anth 99.2 5.4E-10 1.9E-14 118.8 18.9 73 159-242 117-193 (535)
46 2qa1_A PGAE, polyketide oxygen 99.2 5E-10 1.7E-14 118.2 17.6 165 47-242 8-175 (500)
47 3fmw_A Oxygenase; mithramycin, 99.2 1.8E-10 6.1E-15 123.5 14.3 167 48-242 47-217 (570)
48 3e1t_A Halogenase; flavoprotei 99.2 3.1E-10 1E-14 120.2 15.8 156 49-241 6-181 (512)
49 2qa2_A CABE, polyketide oxygen 99.2 5.1E-10 1.7E-14 118.1 16.9 163 49-242 11-176 (499)
50 3klj_A NAD(FAD)-dependent dehy 99.2 7.4E-11 2.5E-15 120.4 10.1 106 50-229 9-116 (385)
51 3axb_A Putative oxidoreductase 99.1 5.6E-11 1.9E-15 123.4 8.8 69 160-241 179-264 (448)
52 3rp8_A Flavoprotein monooxygen 99.1 2.7E-11 9.1E-16 124.2 4.8 147 43-230 16-182 (407)
53 2gjc_A Thiazole biosynthetic e 99.1 6.2E-10 2.1E-14 110.3 13.4 144 50-229 65-239 (326)
54 3f8d_A Thioredoxin reductase ( 99.1 4E-10 1.4E-14 110.8 11.9 112 49-229 14-125 (323)
55 3ka7_A Oxidoreductase; structu 99.1 2.3E-09 7.7E-14 110.2 17.3 63 153-228 188-251 (425)
56 2rgh_A Alpha-glycerophosphate 99.1 2.4E-09 8.2E-14 114.8 17.9 75 160-241 186-260 (571)
57 2q0l_A TRXR, thioredoxin reduc 99.1 5.2E-10 1.8E-14 109.9 11.7 112 51-229 2-114 (311)
58 2qcu_A Aerobic glycerol-3-phos 99.1 2.6E-09 9E-14 112.6 17.9 72 160-239 147-219 (501)
59 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 6E-10 2E-14 111.4 12.2 148 51-227 2-163 (342)
60 2xdo_A TETX2 protein; tetracyc 99.1 8.4E-10 2.9E-14 112.8 13.5 154 48-229 24-182 (398)
61 3nrn_A Uncharacterized protein 99.1 1.8E-09 6.2E-14 111.0 15.9 63 152-228 180-242 (421)
62 2x3n_A Probable FAD-dependent 99.1 8.1E-10 2.8E-14 112.7 13.1 70 159-242 104-176 (399)
63 2q7v_A Thioredoxin reductase; 99.1 8E-10 2.8E-14 109.4 12.2 115 49-229 7-123 (325)
64 1k0i_A P-hydroxybenzoate hydro 99.1 4.8E-10 1.6E-14 114.2 10.8 62 161-230 102-164 (394)
65 3o0h_A Glutathione reductase; 99.1 8.6E-10 2.9E-14 115.9 12.9 96 134-242 205-302 (484)
66 3c4n_A Uncharacterized protein 99.0 2E-10 6.8E-15 117.9 7.8 68 160-241 170-247 (405)
67 4dgk_A Phytoene dehydrogenase; 99.0 1.3E-09 4.6E-14 114.5 14.0 66 152-228 212-277 (501)
68 3itj_A Thioredoxin reductase 1 99.0 5.2E-10 1.8E-14 110.8 10.0 124 47-229 19-142 (338)
69 2r0c_A REBC; flavin adenine di 99.0 2.6E-09 9E-14 114.0 16.0 187 26-242 4-206 (549)
70 2gmh_A Electron transfer flavo 99.0 5.3E-10 1.8E-14 120.2 10.6 174 48-241 33-230 (584)
71 2ywl_A Thioredoxin reductase r 99.0 2.1E-09 7.2E-14 97.1 13.0 118 51-242 2-120 (180)
72 1yvv_A Amine oxidase, flavin-c 99.0 1.4E-09 4.8E-14 107.9 12.3 36 50-87 2-38 (336)
73 3cty_A Thioredoxin reductase; 99.0 1.1E-09 3.6E-14 108.2 11.3 112 49-229 15-126 (319)
74 3ab1_A Ferredoxin--NADP reduct 99.0 1.1E-09 3.7E-14 110.1 11.2 117 49-228 13-130 (360)
75 2a87_A TRXR, TR, thioredoxin r 99.0 1.1E-09 3.7E-14 109.0 10.6 114 48-229 12-126 (335)
76 3urh_A Dihydrolipoyl dehydroge 99.0 5.3E-09 1.8E-13 110.0 16.2 101 134-242 212-314 (491)
77 3alj_A 2-methyl-3-hydroxypyrid 99.0 4.3E-10 1.5E-14 114.1 7.3 156 50-240 11-168 (379)
78 2vou_A 2,6-dihydroxypyridine h 99.0 5.7E-09 1.9E-13 106.5 15.6 144 50-230 5-154 (397)
79 2cul_A Glucose-inhibited divis 99.0 3E-09 1E-13 100.5 12.2 121 50-229 3-125 (232)
80 3lzw_A Ferredoxin--NADP reduct 99.0 1.4E-09 4.9E-14 107.4 10.3 114 50-227 7-121 (332)
81 3nks_A Protoporphyrinogen oxid 99.0 2.9E-09 9.8E-14 111.2 12.9 56 161-227 233-288 (477)
82 3s5w_A L-ornithine 5-monooxyge 99.0 1.3E-09 4.5E-14 113.5 10.1 153 49-229 29-192 (463)
83 3atr_A Conserved archaeal prot 99.0 5.6E-09 1.9E-13 108.6 14.7 160 50-240 6-170 (453)
84 3fbs_A Oxidoreductase; structu 99.0 2.2E-09 7.5E-14 104.2 10.8 110 50-229 2-112 (297)
85 2gv8_A Monooxygenase; FMO, FAD 98.9 4E-09 1.4E-13 109.5 13.0 160 49-228 5-176 (447)
86 3d1c_A Flavin-containing putat 98.9 4.7E-09 1.6E-13 105.5 13.1 139 50-229 4-143 (369)
87 2xve_A Flavin-containing monoo 98.9 1.3E-08 4.4E-13 106.3 16.5 152 51-227 3-164 (464)
88 1trb_A Thioredoxin reductase; 98.9 2.8E-09 9.5E-14 105.0 10.8 112 50-229 5-116 (320)
89 1w4x_A Phenylacetone monooxyge 98.9 4.8E-09 1.6E-13 111.8 12.9 137 48-228 14-153 (542)
90 4dna_A Probable glutathione re 98.9 3.8E-09 1.3E-13 110.2 11.8 96 134-242 184-282 (463)
91 1vdc_A NTR, NADPH dependent th 98.9 1.7E-09 5.9E-14 107.2 8.7 112 50-229 8-124 (333)
92 2e4g_A Tryptophan halogenase; 98.9 1.2E-08 4.1E-13 108.9 14.8 61 159-229 191-252 (550)
93 1mo9_A ORF3; nucleotide bindin 98.9 1.3E-08 4.5E-13 107.9 14.8 72 161-242 254-329 (523)
94 4b1b_A TRXR, thioredoxin reduc 98.9 7.8E-09 2.7E-13 109.8 12.5 82 135-229 238-319 (542)
95 3k7m_X 6-hydroxy-L-nicotine ox 98.9 7.7E-09 2.6E-13 106.4 11.8 37 51-89 2-39 (431)
96 2weu_A Tryptophan 5-halogenase 98.9 1.4E-08 4.7E-13 107.3 13.8 60 160-229 171-230 (511)
97 4ap3_A Steroid monooxygenase; 98.9 8.8E-09 3E-13 109.8 12.3 136 49-227 20-157 (549)
98 3c96_A Flavin-containing monoo 98.9 1.9E-08 6.6E-13 103.0 14.0 63 161-230 106-170 (410)
99 1fl2_A Alkyl hydroperoxide red 98.9 5.8E-09 2E-13 102.3 9.5 114 50-229 1-115 (310)
100 3gwf_A Cyclohexanone monooxyge 98.8 9.7E-09 3.3E-13 109.3 11.7 138 49-228 7-146 (540)
101 3dk9_A Grase, GR, glutathione 98.8 6.1E-09 2.1E-13 109.1 9.7 37 49-87 19-55 (478)
102 1ojt_A Surface protein; redox- 98.8 3E-09 1E-13 111.6 7.0 144 50-229 6-160 (482)
103 2aqj_A Tryptophan halogenase, 98.8 3.7E-09 1.3E-13 112.5 7.7 61 159-229 162-222 (538)
104 3vrd_B FCCB subunit, flavocyto 98.8 9E-09 3.1E-13 105.1 10.2 52 426-479 276-327 (401)
105 2pyx_A Tryptophan halogenase; 98.8 1.7E-08 6E-13 107.0 12.7 59 160-229 173-233 (526)
106 4b63_A L-ornithine N5 monooxyg 98.8 2.7E-08 9.1E-13 105.0 13.9 158 47-229 36-214 (501)
107 3i6d_A Protoporphyrinogen oxid 98.8 9.9E-09 3.4E-13 106.5 10.4 54 161-227 234-287 (470)
108 4gde_A UDP-galactopyranose mut 98.8 3.5E-09 1.2E-13 111.4 7.1 59 155-226 215-273 (513)
109 1ebd_A E3BD, dihydrolipoamide 98.8 1.8E-09 6.2E-14 112.4 4.8 139 50-229 3-145 (455)
110 3r9u_A Thioredoxin reductase; 98.8 7.4E-09 2.5E-13 101.4 8.8 115 49-229 3-118 (315)
111 2vvm_A Monoamine oxidase N; FA 98.8 2.9E-08 1E-12 104.1 13.6 59 158-227 251-310 (495)
112 1dxl_A Dihydrolipoamide dehydr 98.8 1.3E-08 4.5E-13 106.2 10.6 142 49-229 5-151 (470)
113 3qfa_A Thioredoxin reductase 1 98.8 6.1E-09 2.1E-13 110.4 8.2 150 48-229 30-185 (519)
114 2ivd_A PPO, PPOX, protoporphyr 98.8 3.6E-08 1.2E-12 102.9 13.7 62 152-228 229-293 (478)
115 3uox_A Otemo; baeyer-villiger 98.8 2.3E-08 8E-13 106.4 12.5 137 49-227 8-145 (545)
116 2dkh_A 3-hydroxybenzoate hydro 98.8 5.8E-08 2E-12 105.4 15.5 76 160-242 139-221 (639)
117 3lxd_A FAD-dependent pyridine 98.8 5E-08 1.7E-12 100.1 14.0 71 161-242 193-263 (415)
118 3fg2_P Putative rubredoxin red 98.8 1.2E-07 4E-12 97.1 16.5 71 161-242 183-253 (404)
119 4gut_A Lysine-specific histone 98.8 5.7E-08 2E-12 107.3 14.9 38 49-88 335-373 (776)
120 1onf_A GR, grase, glutathione 98.8 3.1E-08 1E-12 104.4 12.1 72 161-242 216-289 (500)
121 1c0p_A D-amino acid oxidase; a 98.8 3.2E-09 1.1E-13 106.9 4.3 37 49-87 5-41 (363)
122 4hb9_A Similarities with proba 98.8 6.4E-08 2.2E-12 98.3 14.0 43 182-230 125-167 (412)
123 2hqm_A GR, grase, glutathione 98.8 1.5E-08 5E-13 106.3 9.3 37 49-87 10-46 (479)
124 1ges_A Glutathione reductase; 98.8 5.3E-08 1.8E-12 101.2 13.4 97 134-242 181-279 (450)
125 2r9z_A Glutathione amide reduc 98.7 3.6E-08 1.2E-12 102.9 12.0 70 162-242 207-278 (463)
126 2qae_A Lipoamide, dihydrolipoy 98.7 2E-08 6.9E-13 104.8 9.9 141 50-229 2-148 (468)
127 3lad_A Dihydrolipoamide dehydr 98.7 1.5E-08 5.3E-13 105.9 8.7 37 49-87 2-39 (476)
128 1hyu_A AHPF, alkyl hydroperoxi 98.7 2.7E-08 9.2E-13 105.4 10.7 115 49-229 211-326 (521)
129 3qvp_A Glucose oxidase; oxidor 98.7 1.8E-08 6.3E-13 107.7 9.4 109 134-247 188-321 (583)
130 3dgh_A TRXR-1, thioredoxin red 98.7 1E-07 3.5E-12 99.9 14.9 64 161-229 226-289 (483)
131 2a8x_A Dihydrolipoyl dehydroge 98.7 2E-08 6.8E-13 104.8 9.3 138 50-229 3-146 (464)
132 1s3e_A Amine oxidase [flavin-c 98.7 6.5E-08 2.2E-12 102.3 13.3 56 159-228 212-267 (520)
133 3l8k_A Dihydrolipoyl dehydroge 98.7 1.3E-08 4.6E-13 106.2 7.2 36 50-87 4-40 (466)
134 1v59_A Dihydrolipoamide dehydr 98.7 1.6E-08 5.4E-13 105.9 7.4 139 50-229 5-157 (478)
135 3oc4_A Oxidoreductase, pyridin 98.7 1.2E-07 4E-12 98.6 13.9 83 134-229 161-244 (452)
136 1xdi_A RV3303C-LPDA; reductase 98.7 3.1E-08 1.1E-12 104.3 9.4 38 50-87 2-40 (499)
137 2bcg_G Secretory pathway GDP d 98.7 5.1E-07 1.8E-11 93.8 18.1 65 153-229 234-300 (453)
138 3iwa_A FAD-dependent pyridine 98.7 1.5E-07 5.1E-12 98.3 14.0 94 137-243 176-271 (472)
139 3ic9_A Dihydrolipoamide dehydr 98.7 5E-08 1.7E-12 102.6 10.2 74 161-242 214-288 (492)
140 3ef6_A Toluene 1,2-dioxygenase 98.7 1.7E-07 5.9E-12 96.1 13.8 69 162-242 185-253 (410)
141 3dgz_A Thioredoxin reductase 2 98.7 7.1E-08 2.4E-12 101.3 11.1 34 48-83 4-37 (488)
142 1zmd_A Dihydrolipoyl dehydroge 98.7 5E-08 1.7E-12 102.0 9.8 138 49-229 5-152 (474)
143 3p1w_A Rabgdi protein; GDI RAB 98.7 1.1E-07 3.9E-12 98.9 12.2 65 153-228 248-313 (475)
144 3g3e_A D-amino-acid oxidase; F 98.7 3.5E-09 1.2E-13 106.1 0.7 37 51-87 1-41 (351)
145 1zk7_A HGII, reductase, mercur 98.7 4.1E-08 1.4E-12 102.4 8.8 37 49-87 3-39 (467)
146 3c4a_A Probable tryptophan hyd 98.6 3.5E-09 1.2E-13 107.6 0.4 138 51-229 1-143 (381)
147 1fec_A Trypanothione reductase 98.6 5.1E-08 1.7E-12 102.5 9.3 32 49-82 2-34 (490)
148 1pn0_A Phenol 2-monooxygenase; 98.6 1.4E-07 4.9E-12 102.7 13.1 76 160-242 117-240 (665)
149 3lov_A Protoporphyrinogen oxid 98.6 1.1E-07 3.7E-12 99.2 11.5 53 161-227 235-287 (475)
150 1rsg_A FMS1 protein; FAD bindi 98.6 6.1E-08 2.1E-12 102.5 9.2 39 50-90 8-48 (516)
151 1lvl_A Dihydrolipoamide dehydr 98.6 1.1E-07 3.7E-12 99.1 10.7 37 49-87 4-40 (458)
152 2yqu_A 2-oxoglutarate dehydrog 98.6 4.5E-08 1.6E-12 101.8 7.7 35 51-87 2-37 (455)
153 3ics_A Coenzyme A-disulfide re 98.6 1.6E-07 5.5E-12 100.9 10.9 118 48-229 34-152 (588)
154 3ntd_A FAD-dependent pyridine 98.6 2E-07 6.9E-12 99.5 11.4 94 136-242 167-279 (565)
155 2jae_A L-amino acid oxidase; o 98.6 3.8E-07 1.3E-11 95.4 13.3 59 159-227 236-294 (489)
156 2wpf_A Trypanothione reductase 98.6 1E-07 3.6E-12 100.2 9.0 32 49-82 6-38 (495)
157 2eq6_A Pyruvate dehydrogenase 98.6 3.1E-08 1.1E-12 103.4 4.6 36 50-87 6-41 (464)
158 2b9w_A Putative aminooxidase; 98.5 6.6E-07 2.3E-11 91.7 14.1 39 49-89 5-45 (424)
159 1q1r_A Putidaredoxin reductase 98.5 8E-07 2.7E-11 91.7 14.4 71 161-242 190-262 (431)
160 3cgb_A Pyridine nucleotide-dis 98.5 3.4E-07 1.2E-11 95.9 11.1 36 50-85 36-71 (480)
161 2yg5_A Putrescine oxidase; oxi 98.5 6.9E-07 2.4E-11 92.4 13.3 38 50-89 5-43 (453)
162 3kd9_A Coenzyme A disulfide re 98.5 1.7E-07 5.7E-12 97.3 8.4 36 50-85 3-38 (449)
163 3k30_A Histamine dehydrogenase 98.5 6.3E-07 2.1E-11 98.2 13.3 57 164-230 569-625 (690)
164 3kkj_A Amine oxidase, flavin-c 98.5 8.4E-08 2.9E-12 90.0 5.3 37 49-87 1-38 (336)
165 3q9t_A Choline dehydrogenase a 98.5 1.9E-06 6.4E-11 92.2 16.3 36 48-84 4-39 (577)
166 2bc0_A NADH oxidase; flavoprot 98.5 5.5E-07 1.9E-11 94.5 11.4 114 49-229 34-149 (490)
167 2v3a_A Rubredoxin reductase; a 98.5 2.3E-07 7.7E-12 94.2 7.8 35 50-84 4-38 (384)
168 2cdu_A NADPH oxidase; flavoenz 98.5 3.8E-07 1.3E-11 94.7 9.6 116 51-229 1-117 (452)
169 1nhp_A NADH peroxidase; oxidor 98.5 2.4E-07 8.1E-12 96.1 7.9 35 51-85 1-35 (447)
170 1d5t_A Guanine nucleotide diss 98.4 2.2E-06 7.6E-11 88.5 14.7 65 153-229 226-290 (433)
171 3pl8_A Pyranose 2-oxidase; sub 98.4 8.7E-07 3E-11 95.8 10.4 35 49-85 45-79 (623)
172 3t37_A Probable dehydrogenase; 98.4 8.8E-06 3E-10 85.9 17.9 35 49-84 16-50 (526)
173 1xhc_A NADH oxidase /nitrite r 98.4 3.9E-07 1.3E-11 92.1 7.1 32 51-85 9-40 (367)
174 2iid_A L-amino-acid oxidase; f 98.4 1.8E-06 6E-11 90.6 12.1 40 49-90 32-72 (498)
175 2gqw_A Ferredoxin reductase; f 98.4 4.9E-06 1.7E-10 85.1 15.2 91 135-242 160-251 (408)
176 1b37_A Protein (polyamine oxid 98.4 1.7E-06 5.7E-11 90.3 11.6 57 160-227 204-268 (472)
177 1kdg_A CDH, cellobiose dehydro 98.4 1.5E-06 5.1E-11 92.5 11.2 34 49-84 6-39 (546)
178 4eqs_A Coenzyme A disulfide re 98.3 2E-06 6.8E-11 88.9 11.7 115 52-229 2-116 (437)
179 2x8g_A Thioredoxin glutathione 98.3 1.3E-06 4.3E-11 94.1 10.2 34 48-83 105-138 (598)
180 1m6i_A Programmed cell death p 98.3 1.7E-06 5.7E-11 91.0 10.8 69 162-242 226-294 (493)
181 3h8l_A NADH oxidase; membrane 98.3 3.8E-07 1.3E-11 93.3 5.7 50 419-475 286-335 (409)
182 2v3a_A Rubredoxin reductase; a 98.3 5.1E-06 1.7E-10 84.2 13.6 110 50-242 145-255 (384)
183 3sx6_A Sulfide-quinone reducta 98.3 7.8E-07 2.7E-11 91.9 7.3 53 429-481 290-349 (437)
184 3g5s_A Methylenetetrahydrofola 98.3 1E-07 3.4E-12 95.9 0.0 66 408-479 293-365 (443)
185 1y56_A Hypothetical protein PH 98.3 1E-06 3.5E-11 92.6 7.5 111 50-229 108-219 (493)
186 3hyw_A Sulfide-quinone reducta 98.3 3.9E-07 1.3E-11 94.0 4.2 52 429-480 279-337 (430)
187 3fpz_A Thiazole biosynthetic e 98.2 6.4E-07 2.2E-11 88.8 4.4 38 50-87 65-103 (326)
188 2gag_A Heterotetrameric sarcos 98.2 4.1E-06 1.4E-10 95.0 11.2 36 50-87 128-164 (965)
189 3h28_A Sulfide-quinone reducta 98.2 1.2E-06 4.1E-11 90.3 5.0 57 421-481 275-338 (430)
190 1ju2_A HydroxynitrIle lyase; f 98.1 1E-06 3.5E-11 93.6 4.0 33 49-84 25-57 (536)
191 2jbv_A Choline oxidase; alcoho 98.1 6.4E-06 2.2E-10 87.6 9.9 35 49-84 12-46 (546)
192 1n4w_A CHOD, cholesterol oxida 98.1 1.9E-05 6.5E-10 83.1 12.9 34 49-84 4-37 (504)
193 3fim_B ARYL-alcohol oxidase; A 98.1 3.1E-06 1.1E-10 90.2 6.9 34 50-84 2-35 (566)
194 1coy_A Cholesterol oxidase; ox 98.1 2.4E-05 8E-10 82.5 13.6 35 48-84 9-43 (507)
195 2eq6_A Pyruvate dehydrogenase 98.1 2.8E-05 9.7E-10 80.8 13.2 114 51-242 170-285 (464)
196 2vdc_G Glutamate synthase [NAD 98.0 4.6E-06 1.6E-10 86.7 6.1 37 49-87 121-158 (456)
197 1ebd_A E3BD, dihydrolipoamide 98.0 6.8E-05 2.3E-09 77.6 14.7 100 51-230 171-271 (455)
198 1v59_A Dihydrolipoamide dehydr 98.0 6.5E-05 2.2E-09 78.3 14.4 103 51-230 184-288 (478)
199 1nhp_A NADH peroxidase; oxidor 98.0 2.9E-05 1E-09 80.2 11.5 98 50-230 149-247 (447)
200 2yqu_A 2-oxoglutarate dehydrog 98.0 3.7E-05 1.3E-09 79.6 11.6 97 51-230 168-265 (455)
201 1ps9_A 2,4-dienoyl-COA reducta 98.0 4.8E-05 1.6E-09 82.9 13.0 39 48-88 371-410 (671)
202 1fec_A Trypanothione reductase 97.9 2.1E-05 7.2E-10 82.4 9.8 112 51-242 188-302 (490)
203 4g6h_A Rotenone-insensitive NA 97.9 9.2E-06 3.2E-10 85.5 7.0 51 418-475 350-400 (502)
204 1zmd_A Dihydrolipoyl dehydroge 97.9 7.9E-05 2.7E-09 77.6 13.2 116 51-242 179-296 (474)
205 3cgb_A Pyridine nucleotide-dis 97.9 4.3E-05 1.5E-09 79.8 11.0 108 50-242 186-294 (480)
206 3s5w_A L-ornithine 5-monooxyge 97.9 0.00022 7.4E-09 73.8 16.1 145 50-229 227-377 (463)
207 1gpe_A Protein (glucose oxidas 97.9 0.00011 3.9E-09 78.6 14.3 35 49-84 23-57 (587)
208 2qae_A Lipoamide, dihydrolipoy 97.9 7.8E-05 2.7E-09 77.5 12.4 113 51-242 175-290 (468)
209 2hqm_A GR, grase, glutathione 97.8 6.3E-05 2.1E-09 78.5 10.5 109 51-242 186-298 (479)
210 2wpf_A Trypanothione reductase 97.8 7.1E-05 2.4E-09 78.5 10.9 112 51-242 192-306 (495)
211 1trb_A Thioredoxin reductase; 97.8 0.00026 8.7E-09 69.1 13.7 101 51-229 146-247 (320)
212 2e1m_A L-glutamate oxidase; L- 97.8 2.2E-05 7.4E-10 79.4 5.8 37 49-87 43-81 (376)
213 3hdq_A UDP-galactopyranose mut 97.8 2E-05 6.8E-10 80.2 5.4 39 48-88 27-66 (397)
214 1lqt_A FPRA; NADP+ derivative, 97.7 3.8E-06 1.3E-10 87.3 -0.3 38 50-87 3-46 (456)
215 1v0j_A UDP-galactopyranose mut 97.7 2.3E-05 7.8E-10 79.9 5.0 40 49-89 6-46 (399)
216 3ihm_A Styrene monooxygenase A 97.7 2.2E-05 7.5E-10 80.8 4.7 35 49-85 21-55 (430)
217 1zk7_A HGII, reductase, mercur 97.7 0.00031 1.1E-08 72.9 13.0 95 51-230 177-272 (467)
218 1dxl_A Dihydrolipoamide dehydr 97.7 0.0002 6.8E-09 74.4 11.5 102 51-230 178-280 (470)
219 3dgz_A Thioredoxin reductase 2 97.7 0.00041 1.4E-08 72.5 13.8 115 51-242 186-301 (488)
220 3itj_A Thioredoxin reductase 1 97.6 0.00044 1.5E-08 67.7 13.1 98 50-229 173-271 (338)
221 1xdi_A RV3303C-LPDA; reductase 97.6 0.00029 9.8E-09 73.9 12.4 97 51-230 183-280 (499)
222 1sez_A Protoporphyrinogen oxid 97.6 3.6E-05 1.2E-09 80.6 5.4 39 49-89 12-51 (504)
223 2a8x_A Dihydrolipoyl dehydroge 97.6 0.00027 9.2E-09 73.3 11.9 112 51-242 172-285 (464)
224 1ojt_A Surface protein; redox- 97.6 0.00014 4.6E-09 76.0 9.5 113 51-242 186-300 (482)
225 1xhc_A NADH oxidase /nitrite r 97.6 0.00022 7.4E-09 71.8 10.6 102 51-242 144-246 (367)
226 2bc0_A NADH oxidase; flavoprot 97.6 0.00035 1.2E-08 73.1 12.2 98 50-230 194-292 (490)
227 3ics_A Coenzyme A-disulfide re 97.6 0.00037 1.3E-08 74.5 12.4 106 51-242 188-294 (588)
228 1i8t_A UDP-galactopyranose mut 97.6 4.2E-05 1.4E-09 77.0 4.6 37 51-89 2-39 (367)
229 3lad_A Dihydrolipoamide dehydr 97.6 0.0005 1.7E-08 71.4 12.7 99 51-229 181-280 (476)
230 3dk9_A Grase, GR, glutathione 97.5 0.00057 1.9E-08 71.1 12.8 115 51-242 188-307 (478)
231 2cdu_A NADPH oxidase; flavoenz 97.5 0.00067 2.3E-08 70.0 12.8 97 51-230 150-248 (452)
232 3kd9_A Coenzyme A disulfide re 97.5 0.00059 2E-08 70.3 12.3 108 51-243 149-257 (449)
233 3g5s_A Methylenetetrahydrofola 97.5 9.2E-05 3.1E-09 74.5 5.7 32 51-84 2-33 (443)
234 4dsg_A UDP-galactopyranose mut 97.5 0.0001 3.5E-09 77.1 6.3 42 49-92 8-51 (484)
235 1lvl_A Dihydrolipoamide dehydr 97.5 0.00031 1.1E-08 72.8 9.4 109 51-242 172-282 (458)
236 3ab1_A Ferredoxin--NADP reduct 97.4 0.00044 1.5E-08 68.8 9.8 112 51-242 164-275 (360)
237 2bi7_A UDP-galactopyranose mut 97.4 0.00013 4.3E-09 74.0 5.5 37 50-88 3-40 (384)
238 3cty_A Thioredoxin reductase; 97.4 0.0016 5.5E-08 63.4 12.7 97 51-229 156-252 (319)
239 1fl2_A Alkyl hydroperoxide red 97.3 0.0022 7.6E-08 62.0 12.8 97 51-229 145-242 (310)
240 2q0l_A TRXR, thioredoxin reduc 97.3 0.0024 8.2E-08 61.8 12.7 32 51-84 144-175 (311)
241 3qfa_A Thioredoxin reductase 1 97.2 0.004 1.4E-07 65.5 15.1 102 51-229 211-315 (519)
242 2zbw_A Thioredoxin reductase; 97.2 0.0036 1.2E-07 61.3 13.6 111 51-241 153-263 (335)
243 4eqs_A Coenzyme A disulfide re 97.2 0.00048 1.6E-08 70.9 7.5 104 51-242 148-252 (437)
244 3f8d_A Thioredoxin reductase ( 97.1 0.0044 1.5E-07 59.9 13.2 108 51-242 155-263 (323)
245 2z3y_A Lysine-specific histone 97.1 0.0004 1.4E-08 75.5 6.1 39 48-88 105-144 (662)
246 1o94_A Tmadh, trimethylamine d 97.1 0.00046 1.6E-08 75.8 6.2 38 48-87 387-425 (729)
247 2q7v_A Thioredoxin reductase; 97.1 0.0056 1.9E-07 59.7 13.1 96 51-229 153-249 (325)
248 2xag_A Lysine-specific histone 97.0 0.00054 1.8E-08 76.3 6.1 38 49-88 277-315 (852)
249 3d1c_A Flavin-containing putat 97.0 0.0029 1E-07 62.8 10.9 104 51-230 167-273 (369)
250 1vdc_A NTR, NADPH dependent th 97.0 0.0035 1.2E-07 61.3 11.2 98 50-229 159-259 (333)
251 2x8g_A Thioredoxin glutathione 97.0 0.0093 3.2E-07 63.8 15.3 32 51-84 287-318 (598)
252 3r9u_A Thioredoxin reductase; 97.0 0.0052 1.8E-07 59.2 12.0 96 51-228 148-243 (315)
253 3lzw_A Ferredoxin--NADP reduct 97.0 0.0042 1.4E-07 60.4 11.4 108 50-241 154-261 (332)
254 3l8k_A Dihydrolipoyl dehydroge 96.9 0.0026 8.9E-08 65.9 9.5 111 51-242 173-285 (466)
255 2a87_A TRXR, TR, thioredoxin r 96.8 0.0047 1.6E-07 60.6 10.5 32 51-84 156-187 (335)
256 1cjc_A Protein (adrenodoxin re 96.8 0.00085 2.9E-08 69.6 5.1 35 50-84 6-40 (460)
257 3gwf_A Cyclohexanone monooxyge 96.8 0.0031 1.1E-07 66.7 9.5 33 50-84 178-210 (540)
258 1gte_A Dihydropyrimidine dehyd 96.7 0.0013 4.3E-08 75.1 5.4 38 49-88 186-225 (1025)
259 1hyu_A AHPF, alkyl hydroperoxi 96.5 0.013 4.3E-07 61.7 11.7 97 51-229 356-453 (521)
260 3uox_A Otemo; baeyer-villiger 96.5 0.0053 1.8E-07 65.0 8.8 33 50-84 185-217 (545)
261 4g6h_A Rotenone-insensitive NA 96.5 0.0076 2.6E-07 63.1 9.9 59 162-229 272-332 (502)
262 3fbs_A Oxidoreductase; structu 96.5 0.0029 1E-07 60.5 6.0 98 50-242 141-238 (297)
263 1cjc_A Protein (adrenodoxin re 96.4 0.023 7.9E-07 58.7 12.7 51 175-229 270-333 (460)
264 3ayj_A Pro-enzyme of L-phenyla 96.4 0.0013 4.6E-08 71.4 2.9 61 158-226 343-411 (721)
265 2vdc_G Glutamate synthase [NAD 96.2 0.011 3.9E-07 61.0 8.9 33 50-84 264-297 (456)
266 1lqt_A FPRA; NADP+ derivative, 96.1 0.017 5.9E-07 59.6 9.8 22 50-71 147-168 (456)
267 4a5l_A Thioredoxin reductase; 95.7 0.11 3.7E-06 49.9 13.1 32 51-84 153-184 (314)
268 1gte_A Dihydropyrimidine dehyd 95.7 0.065 2.2E-06 61.0 13.0 32 51-84 333-365 (1025)
269 1vg0_A RAB proteins geranylger 95.5 0.013 4.3E-07 63.0 5.8 65 152-226 369-434 (650)
270 2gag_A Heterotetrameric sarcos 95.3 0.087 3E-06 59.5 12.2 104 51-240 285-393 (965)
271 4ap3_A Steroid monooxygenase; 95.3 0.018 6.2E-07 60.9 6.1 33 50-84 191-223 (549)
272 1o94_A Tmadh, trimethylamine d 94.9 0.17 5.9E-06 55.3 12.5 32 51-84 529-562 (729)
273 2gv8_A Monooxygenase; FMO, FAD 94.7 0.031 1.1E-06 57.3 5.8 33 50-84 212-245 (447)
274 4b63_A L-ornithine N5 monooxyg 94.7 0.24 8.2E-06 51.6 12.7 34 51-84 247-280 (501)
275 3fwz_A Inner membrane protein 94.3 0.064 2.2E-06 45.5 5.9 34 49-84 6-39 (140)
276 2g1u_A Hypothetical protein TM 93.4 0.089 3E-06 45.4 5.2 33 50-84 19-51 (155)
277 1lss_A TRK system potassium up 93.3 0.086 3E-06 44.0 4.8 32 51-84 5-36 (140)
278 3llv_A Exopolyphosphatase-rela 92.6 0.13 4.5E-06 43.3 5.1 32 51-84 7-38 (141)
279 3ic5_A Putative saccharopine d 92.1 0.14 4.6E-06 41.3 4.3 33 50-84 5-38 (118)
280 4gcm_A TRXR, thioredoxin reduc 91.9 0.13 4.5E-06 49.5 4.7 32 51-84 146-177 (312)
281 3c85_A Putative glutathione-re 91.5 0.19 6.5E-06 44.4 4.9 33 50-84 39-72 (183)
282 2cul_A Glucose-inhibited divis 91.3 0.072 2.5E-06 49.3 1.9 40 430-475 192-231 (232)
283 3klj_A NAD(FAD)-dependent dehy 91.3 0.14 4.7E-06 51.5 4.1 32 51-84 147-178 (385)
284 1id1_A Putative potassium chan 91.1 0.26 9E-06 42.2 5.3 32 51-84 4-35 (153)
285 2hmt_A YUAA protein; RCK, KTN, 90.8 0.22 7.6E-06 41.6 4.5 32 51-84 7-38 (144)
286 4fk1_A Putative thioredoxin re 90.5 0.51 1.7E-05 45.1 7.3 59 172-242 190-248 (304)
287 1y56_A Hypothetical protein PH 90.3 0.26 8.9E-06 51.1 5.4 61 170-242 265-325 (493)
288 1f0y_A HCDH, L-3-hydroxyacyl-C 90.3 0.28 9.5E-06 47.3 5.2 33 50-84 15-47 (302)
289 3i83_A 2-dehydropantoate 2-red 90.0 0.26 8.9E-06 48.0 4.8 33 51-85 3-35 (320)
290 3l4b_C TRKA K+ channel protien 89.8 0.3 1E-05 44.5 4.8 31 52-84 2-32 (218)
291 3k6j_A Protein F01G10.3, confi 89.7 0.48 1.6E-05 48.6 6.6 33 50-84 54-86 (460)
292 3hn2_A 2-dehydropantoate 2-red 89.5 0.26 9E-06 47.8 4.3 33 51-85 3-35 (312)
293 3ado_A Lambda-crystallin; L-gu 89.1 0.31 1.1E-05 47.5 4.5 33 50-84 6-38 (319)
294 3k96_A Glycerol-3-phosphate de 89.0 0.39 1.3E-05 47.7 5.2 33 50-84 29-61 (356)
295 1vg0_A RAB proteins geranylger 88.9 1.1 3.8E-05 48.0 8.9 39 48-88 6-45 (650)
296 1ges_A Glutathione reductase; 88.9 0.31 1.1E-05 49.8 4.6 32 51-84 168-199 (450)
297 3sx6_A Sulfide-quinone reducta 88.9 0.19 6.6E-06 51.1 3.0 108 50-229 4-112 (437)
298 3h8l_A NADH oxidase; membrane 88.8 0.71 2.4E-05 46.2 7.1 84 137-239 191-278 (409)
299 2gqw_A Ferredoxin reductase; f 88.6 0.38 1.3E-05 48.5 4.9 33 50-84 145-177 (408)
300 1lld_A L-lactate dehydrogenase 88.6 0.38 1.3E-05 46.6 4.7 32 51-84 8-41 (319)
301 3dfz_A SIRC, precorrin-2 dehyd 87.8 0.48 1.6E-05 43.7 4.6 32 50-83 31-62 (223)
302 1kyq_A Met8P, siroheme biosynt 87.8 0.39 1.3E-05 45.8 4.1 32 50-83 13-44 (274)
303 3g17_A Similar to 2-dehydropan 87.7 0.33 1.1E-05 46.6 3.6 32 51-84 3-34 (294)
304 2r9z_A Glutathione amide reduc 87.7 0.42 1.4E-05 49.1 4.6 32 51-84 167-198 (463)
305 2x5o_A UDP-N-acetylmuramoylala 87.7 0.44 1.5E-05 48.6 4.7 31 51-83 6-36 (439)
306 1pzg_A LDH, lactate dehydrogen 87.6 0.51 1.7E-05 46.3 5.0 33 50-84 9-42 (331)
307 3kkj_A Amine oxidase, flavin-c 87.6 0.23 8E-06 45.2 2.4 37 434-476 292-328 (336)
308 2ywl_A Thioredoxin reductase r 87.4 0.31 1.1E-05 42.7 3.0 45 430-479 130-174 (180)
309 4e21_A 6-phosphogluconate dehy 87.3 0.5 1.7E-05 46.9 4.8 33 50-84 22-54 (358)
310 2wtb_A MFP2, fatty acid multif 87.3 0.58 2E-05 51.0 5.6 33 50-84 312-344 (725)
311 3h28_A Sulfide-quinone reducta 87.0 0.29 9.8E-06 49.7 2.9 35 50-84 2-36 (430)
312 2ew2_A 2-dehydropantoate 2-red 86.9 0.54 1.8E-05 45.1 4.6 32 51-84 4-35 (316)
313 3vtf_A UDP-glucose 6-dehydroge 86.9 0.56 1.9E-05 47.9 4.9 35 48-84 19-53 (444)
314 4e12_A Diketoreductase; oxidor 86.8 0.66 2.2E-05 44.2 5.1 32 51-84 5-36 (283)
315 3ic9_A Dihydrolipoamide dehydr 86.7 0.51 1.7E-05 48.9 4.6 32 51-84 175-206 (492)
316 3fpz_A Thiazole biosynthetic e 86.6 0.15 5.2E-06 49.6 0.5 44 433-476 280-325 (326)
317 3doj_A AT3G25530, dehydrogenas 86.5 0.68 2.3E-05 44.8 5.1 33 50-84 21-53 (310)
318 3ghy_A Ketopantoate reductase 86.5 0.62 2.1E-05 45.6 4.9 32 51-84 4-35 (335)
319 1q1r_A Putidaredoxin reductase 86.5 0.57 1.9E-05 47.6 4.7 33 50-84 149-181 (431)
320 3zwc_A Peroxisomal bifunctiona 86.3 0.68 2.3E-05 50.5 5.4 71 12-84 275-348 (742)
321 4dio_A NAD(P) transhydrogenase 86.1 0.65 2.2E-05 46.7 4.8 33 50-84 190-222 (405)
322 1ks9_A KPA reductase;, 2-dehyd 86.0 0.66 2.3E-05 43.9 4.7 31 52-84 2-32 (291)
323 3ef6_A Toluene 1,2-dioxygenase 85.8 0.65 2.2E-05 46.7 4.7 33 50-84 143-175 (410)
324 2a9f_A Putative malic enzyme ( 85.6 0.62 2.1E-05 46.6 4.3 34 49-84 187-221 (398)
325 4g65_A TRK system potassium up 85.5 0.42 1.5E-05 49.2 3.2 33 50-84 3-35 (461)
326 2y0c_A BCEC, UDP-glucose dehyd 85.5 0.67 2.3E-05 47.9 4.8 33 50-84 8-40 (478)
327 3pid_A UDP-glucose 6-dehydroge 85.5 0.71 2.4E-05 47.0 4.8 32 50-84 36-67 (432)
328 2dpo_A L-gulonate 3-dehydrogen 85.2 0.77 2.6E-05 44.8 4.8 33 50-84 6-38 (319)
329 1onf_A GR, grase, glutathione 85.2 0.68 2.3E-05 48.0 4.7 32 51-84 177-208 (500)
330 3r8n_M 30S ribosomal protein S 85.2 0.9 3.1E-05 37.1 4.3 41 362-402 23-63 (114)
331 1guz_A Malate dehydrogenase; o 84.9 0.84 2.9E-05 44.2 4.9 33 52-84 2-34 (310)
332 3gg2_A Sugar dehydrogenase, UD 84.9 0.75 2.6E-05 47.1 4.8 32 51-84 3-34 (450)
333 1zcj_A Peroxisomal bifunctiona 84.9 0.99 3.4E-05 46.4 5.7 33 50-84 37-69 (463)
334 2xve_A Flavin-containing monoo 84.7 0.72 2.5E-05 47.3 4.6 32 51-84 198-229 (464)
335 3lk7_A UDP-N-acetylmuramoylala 84.7 0.69 2.3E-05 47.4 4.4 33 50-84 9-41 (451)
336 2raf_A Putative dinucleotide-b 84.7 0.9 3.1E-05 41.2 4.7 33 50-84 19-51 (209)
337 2hjr_A Malate dehydrogenase; m 84.7 0.88 3E-05 44.5 4.9 32 51-84 15-47 (328)
338 2ewd_A Lactate dehydrogenase,; 84.3 0.83 2.8E-05 44.4 4.6 32 51-84 5-37 (317)
339 1jw9_B Molybdopterin biosynthe 84.2 0.72 2.5E-05 43.2 3.9 34 51-86 32-66 (249)
340 3p2y_A Alanine dehydrogenase/p 84.1 0.74 2.5E-05 45.9 4.1 33 50-84 184-216 (381)
341 2z3y_A Lysine-specific histone 84.1 3.3 0.00011 44.5 9.6 79 154-248 393-474 (662)
342 2v6b_A L-LDH, L-lactate dehydr 84.1 0.88 3E-05 43.9 4.6 31 52-84 2-34 (304)
343 3ntd_A FAD-dependent pyridine 83.9 0.84 2.9E-05 47.9 4.7 32 51-84 152-183 (565)
344 1vl6_A Malate oxidoreductase; 83.7 0.83 2.8E-05 45.6 4.3 34 49-84 191-225 (388)
345 4b1b_A TRXR, thioredoxin reduc 83.6 0.79 2.7E-05 48.2 4.3 33 51-85 224-256 (542)
346 3l9w_A Glutathione-regulated p 83.6 1 3.5E-05 45.5 5.0 33 50-84 4-36 (413)
347 1z82_A Glycerol-3-phosphate de 83.5 0.98 3.3E-05 44.1 4.7 34 49-84 13-46 (335)
348 1bg6_A N-(1-D-carboxylethyl)-L 83.4 0.99 3.4E-05 44.2 4.8 32 51-84 5-36 (359)
349 2o3j_A UDP-glucose 6-dehydroge 83.3 1.1 3.6E-05 46.4 5.1 35 50-84 9-43 (481)
350 3oj0_A Glutr, glutamyl-tRNA re 83.2 0.57 2E-05 39.5 2.6 32 51-84 22-53 (144)
351 3g79_A NDP-N-acetyl-D-galactos 83.2 0.98 3.4E-05 46.6 4.7 33 50-84 18-52 (478)
352 4ffl_A PYLC; amino acid, biosy 83.1 1.1 3.9E-05 44.0 5.0 32 51-84 2-33 (363)
353 3hwr_A 2-dehydropantoate 2-red 82.9 0.97 3.3E-05 43.9 4.4 32 50-84 19-50 (318)
354 3lxd_A FAD-dependent pyridine 82.9 1.1 3.7E-05 45.1 4.9 33 50-84 152-184 (415)
355 2qyt_A 2-dehydropantoate 2-red 82.8 0.62 2.1E-05 44.8 2.9 31 51-83 9-45 (317)
356 1pjc_A Protein (L-alanine dehy 82.6 1.1 3.7E-05 44.5 4.7 32 51-84 168-199 (361)
357 3fg2_P Putative rubredoxin red 82.5 1.1 3.7E-05 44.9 4.7 32 51-84 143-174 (404)
358 3urh_A Dihydrolipoyl dehydroge 82.4 0.83 2.8E-05 47.1 3.9 32 51-84 199-230 (491)
359 4dgk_A Phytoene dehydrogenase; 82.3 0.8 2.7E-05 47.1 3.7 37 50-88 1-38 (501)
360 2uyy_A N-PAC protein; long-cha 82.2 1.5 5.3E-05 42.1 5.5 33 50-84 30-62 (316)
361 3dtt_A NADP oxidoreductase; st 82.2 1.4 4.6E-05 41.0 4.9 33 50-84 19-51 (245)
362 3oc4_A Oxidoreductase, pyridin 82.0 1.7 5.9E-05 44.2 6.1 112 51-229 3-115 (452)
363 3hyw_A Sulfide-quinone reducta 82.0 2.3 7.9E-05 42.9 7.0 68 162-242 200-267 (430)
364 3qsg_A NAD-binding phosphogluc 81.9 0.94 3.2E-05 43.8 3.9 33 50-84 24-57 (312)
365 2vns_A Metalloreductase steap3 81.9 1.4 4.9E-05 40.0 4.9 33 50-84 28-60 (215)
366 1x13_A NAD(P) transhydrogenase 81.9 1.3 4.3E-05 44.7 4.9 33 50-84 172-204 (401)
367 1t2d_A LDH-P, L-lactate dehydr 81.7 1.4 4.9E-05 42.8 5.1 32 51-84 5-37 (322)
368 1wdk_A Fatty oxidation complex 81.5 0.53 1.8E-05 51.2 2.1 33 50-84 314-346 (715)
369 1evy_A Glycerol-3-phosphate de 81.4 0.99 3.4E-05 44.6 3.9 31 52-84 17-47 (366)
370 4dll_A 2-hydroxy-3-oxopropiona 81.3 1.1 3.8E-05 43.5 4.1 33 50-84 31-63 (320)
371 3ego_A Probable 2-dehydropanto 81.0 1.4 4.7E-05 42.5 4.7 32 50-84 2-33 (307)
372 3eag_A UDP-N-acetylmuramate:L- 81.0 1.5 5.1E-05 42.7 4.9 33 50-84 4-37 (326)
373 1l7d_A Nicotinamide nucleotide 80.9 1.4 4.9E-05 43.9 4.9 33 50-84 172-204 (384)
374 3gvi_A Malate dehydrogenase; N 80.9 1.6 5.3E-05 42.7 5.0 33 50-84 7-40 (324)
375 1mv8_A GMD, GDP-mannose 6-dehy 80.8 1.2 4E-05 45.4 4.3 31 52-84 2-32 (436)
376 3dgh_A TRXR-1, thioredoxin red 80.6 1.5 5.1E-05 45.1 5.0 32 51-84 188-219 (483)
377 2q3e_A UDP-glucose 6-dehydroge 80.5 1.4 4.7E-05 45.3 4.7 34 51-84 6-39 (467)
378 2i6t_A Ubiquitin-conjugating e 80.5 1.1 3.8E-05 43.3 3.8 33 50-84 14-48 (303)
379 3g0o_A 3-hydroxyisobutyrate de 80.4 1.5 5.2E-05 42.0 4.8 33 50-84 7-39 (303)
380 1ur5_A Malate dehydrogenase; o 80.4 1.4 4.8E-05 42.6 4.5 32 51-84 3-35 (309)
381 2pv7_A T-protein [includes: ch 80.2 2.3 7.7E-05 40.8 5.9 33 50-84 21-54 (298)
382 4a7p_A UDP-glucose dehydrogena 80.1 1.6 5.4E-05 44.6 4.9 33 50-84 8-40 (446)
383 3ggo_A Prephenate dehydrogenas 80.0 1.8 6.2E-05 41.9 5.2 33 50-84 33-67 (314)
384 2eez_A Alanine dehydrogenase; 79.9 1.7 5.8E-05 43.1 5.0 32 51-84 167-198 (369)
385 1nyt_A Shikimate 5-dehydrogena 79.7 1.7 5.9E-05 41.0 4.8 32 50-83 119-150 (271)
386 1txg_A Glycerol-3-phosphate de 79.6 1.2 4.2E-05 43.0 3.8 30 52-83 2-31 (335)
387 3pef_A 6-phosphogluconate dehy 79.5 1.7 5.8E-05 41.3 4.7 32 51-84 2-33 (287)
388 2h78_A Hibadh, 3-hydroxyisobut 79.4 1.5 5.1E-05 41.9 4.3 33 50-84 3-35 (302)
389 1mo9_A ORF3; nucleotide bindin 79.3 1.5 5.1E-05 45.7 4.6 32 51-84 215-246 (523)
390 1a5z_A L-lactate dehydrogenase 79.3 1.3 4.5E-05 43.0 3.9 31 52-84 2-34 (319)
391 3qha_A Putative oxidoreductase 79.3 1.6 5.5E-05 41.8 4.5 33 50-84 15-47 (296)
392 1y6j_A L-lactate dehydrogenase 79.0 1.7 5.7E-05 42.3 4.5 32 51-84 8-41 (318)
393 2izz_A Pyrroline-5-carboxylate 78.8 1.7 6E-05 42.1 4.6 33 51-85 23-59 (322)
394 1jay_A Coenzyme F420H2:NADP+ o 78.5 2.1 7.3E-05 38.3 4.9 31 52-84 2-33 (212)
395 1hyh_A L-hicdh, L-2-hydroxyiso 78.4 1.5 5.1E-05 42.3 3.9 32 51-84 2-35 (309)
396 3l6d_A Putative oxidoreductase 78.3 2.8 9.6E-05 40.3 5.9 33 50-84 9-41 (306)
397 3mog_A Probable 3-hydroxybutyr 78.3 2 6.7E-05 44.4 5.0 32 51-84 6-37 (483)
398 3rui_A Ubiquitin-like modifier 78.1 2.1 7.2E-05 42.0 4.9 34 50-85 34-68 (340)
399 3c7a_A Octopine dehydrogenase; 78.1 1.3 4.3E-05 44.5 3.5 31 51-82 3-33 (404)
400 1vpd_A Tartronate semialdehyde 78.0 1.7 5.9E-05 41.3 4.3 32 51-84 6-37 (299)
401 3h8v_A Ubiquitin-like modifier 77.8 1.7 5.7E-05 41.8 4.0 36 50-86 36-71 (292)
402 2vhw_A Alanine dehydrogenase; 77.7 2.2 7.5E-05 42.5 5.0 33 50-84 168-200 (377)
403 4ezb_A Uncharacterized conserv 77.6 2 6.8E-05 41.6 4.6 33 50-84 24-57 (317)
404 3tl2_A Malate dehydrogenase; c 77.6 2 6.9E-05 41.7 4.6 32 51-84 9-41 (315)
405 4huj_A Uncharacterized protein 77.4 1.5 5.2E-05 39.9 3.5 33 50-84 23-56 (220)
406 3e8x_A Putative NAD-dependent 77.3 2.4 8.1E-05 38.6 4.9 33 50-84 21-54 (236)
407 3iwa_A FAD-dependent pyridine 77.2 2.4 8.4E-05 43.2 5.4 35 50-84 3-37 (472)
408 1zud_1 Adenylyltransferase THI 77.0 2.2 7.4E-05 39.9 4.5 35 50-86 28-63 (251)
409 3pdu_A 3-hydroxyisobutyrate de 76.9 1.7 5.7E-05 41.3 3.8 32 51-84 2-33 (287)
410 3ldh_A Lactate dehydrogenase; 76.8 2.5 8.5E-05 41.3 5.0 33 50-84 21-55 (330)
411 2egg_A AROE, shikimate 5-dehyd 76.7 2.5 8.4E-05 40.6 4.9 32 50-83 141-173 (297)
412 1pjq_A CYSG, siroheme synthase 76.6 2 6.7E-05 44.1 4.4 33 50-84 12-44 (457)
413 2zyd_A 6-phosphogluconate dehy 76.4 2.2 7.4E-05 44.0 4.7 33 50-84 15-47 (480)
414 4fgw_A Glycerol-3-phosphate de 76.3 0.86 2.9E-05 45.7 1.6 62 22-84 7-74 (391)
415 4aj2_A L-lactate dehydrogenase 76.2 2.7 9.4E-05 41.0 5.1 33 50-84 19-53 (331)
416 3p7m_A Malate dehydrogenase; p 76.1 2.6 9E-05 41.0 5.0 32 51-84 6-38 (321)
417 2f1k_A Prephenate dehydrogenas 76.1 2.4 8.3E-05 39.8 4.6 31 52-84 2-32 (279)
418 4a9w_A Monooxygenase; baeyer-v 76.0 2.2 7.7E-05 41.0 4.5 32 50-84 163-194 (357)
419 1oju_A MDH, malate dehydrogena 76.0 1.9 6.5E-05 41.4 3.9 31 52-84 2-34 (294)
420 3phh_A Shikimate dehydrogenase 75.9 2.5 8.5E-05 40.0 4.6 33 50-84 118-150 (269)
421 3o0h_A Glutathione reductase; 75.7 2.2 7.6E-05 43.8 4.6 32 51-84 192-223 (484)
422 1p77_A Shikimate 5-dehydrogena 75.6 2 6.9E-05 40.6 3.9 33 50-84 119-151 (272)
423 4dna_A Probable glutathione re 75.3 2.3 8E-05 43.3 4.6 33 50-84 170-202 (463)
424 3u5c_S 40S ribosomal protein S 75.1 3.3 0.00011 35.3 4.6 39 362-400 37-75 (146)
425 3j20_O 30S ribosomal protein S 75.0 3.2 0.00011 35.4 4.5 39 362-400 30-68 (148)
426 2gcg_A Glyoxylate reductase/hy 74.7 6.1 0.00021 38.4 7.2 33 50-84 155-187 (330)
427 1ldn_A L-lactate dehydrogenase 74.7 3.4 0.00012 40.0 5.3 35 50-84 6-40 (316)
428 2pzm_A Putative nucleotide sug 74.7 4 0.00014 39.2 5.9 34 50-85 20-54 (330)
429 1yqg_A Pyrroline-5-carboxylate 74.6 2.2 7.6E-05 39.7 3.9 31 52-84 2-33 (263)
430 3c24_A Putative oxidoreductase 74.5 3.1 0.0001 39.4 4.9 32 51-84 12-44 (286)
431 3cky_A 2-hydroxymethyl glutara 74.4 2.5 8.6E-05 40.2 4.3 32 51-84 5-36 (301)
432 2g5c_A Prephenate dehydrogenas 74.3 3 0.0001 39.3 4.8 32 51-84 2-35 (281)
433 3gt0_A Pyrroline-5-carboxylate 74.2 3.3 0.00011 38.3 5.0 32 51-84 3-38 (247)
434 1yj8_A Glycerol-3-phosphate de 74.2 1.8 6.3E-05 42.8 3.4 32 51-84 22-60 (375)
435 2p4q_A 6-phosphogluconate dehy 74.0 3.1 0.0001 43.1 5.1 33 50-84 10-42 (497)
436 2ahr_A Putative pyrroline carb 74.0 2.9 0.0001 38.8 4.6 32 51-84 4-35 (259)
437 3pqe_A L-LDH, L-lactate dehydr 73.9 2.5 8.7E-05 41.2 4.2 33 50-84 5-39 (326)
438 3ius_A Uncharacterized conserv 73.6 3.2 0.00011 38.9 4.8 33 50-84 5-37 (286)
439 3iz6_M 40S ribosomal protein S 73.5 3.7 0.00012 35.2 4.5 39 362-400 35-73 (152)
440 2gf2_A Hibadh, 3-hydroxyisobut 73.5 2.9 9.9E-05 39.6 4.5 31 52-84 2-32 (296)
441 2b69_A UDP-glucuronate decarbo 73.4 3.7 0.00013 39.7 5.3 34 50-85 27-61 (343)
442 2aef_A Calcium-gated potassium 73.0 1.7 5.7E-05 39.9 2.5 32 50-84 9-40 (234)
443 2e1m_C L-glutamate oxidase; L- 72.7 1.4 4.6E-05 39.1 1.8 40 433-476 114-153 (181)
444 3don_A Shikimate dehydrogenase 72.7 3 0.0001 39.7 4.3 33 50-84 117-150 (277)
445 3tnl_A Shikimate dehydrogenase 72.7 3.6 0.00012 39.9 4.9 33 50-84 154-187 (315)
446 3jyo_A Quinate/shikimate dehyd 72.7 3.5 0.00012 39.3 4.8 33 50-84 127-160 (283)
447 3vh1_A Ubiquitin-like modifier 72.7 3.3 0.00011 43.7 4.9 35 50-86 327-362 (598)
448 1dlj_A UDP-glucose dehydrogena 72.6 2.9 9.9E-05 42.0 4.4 30 52-84 2-31 (402)
449 2xzm_M RPS18E; ribosome, trans 72.5 4.4 0.00015 34.8 4.8 39 362-400 37-75 (155)
450 3nep_X Malate dehydrogenase; h 72.4 2.7 9.3E-05 40.7 4.0 33 52-84 2-34 (314)
451 3h5n_A MCCB protein; ubiquitin 72.2 3 0.0001 41.1 4.3 35 50-86 118-153 (353)
452 3b1f_A Putative prephenate deh 72.2 3.5 0.00012 38.9 4.8 34 51-84 7-40 (290)
453 2ph5_A Homospermidine synthase 72.2 8.2 0.00028 39.5 7.6 36 51-87 14-52 (480)
454 3u62_A Shikimate dehydrogenase 72.2 3.7 0.00013 38.4 4.8 31 52-84 110-141 (253)
455 1zej_A HBD-9, 3-hydroxyacyl-CO 72.2 3.5 0.00012 39.5 4.7 32 50-84 12-43 (293)
456 3ktd_A Prephenate dehydrogenas 71.9 4 0.00014 40.0 5.1 33 50-84 8-40 (341)
457 3d0o_A L-LDH 1, L-lactate dehy 71.9 3.5 0.00012 39.9 4.7 35 50-84 6-40 (317)
458 1nvt_A Shikimate 5'-dehydrogen 71.9 3.4 0.00012 39.3 4.6 30 51-83 129-158 (287)
459 3vrd_B FCCB subunit, flavocyto 71.8 1 3.5E-05 44.8 0.8 59 169-240 209-267 (401)
460 4gsl_A Ubiquitin-like modifier 71.8 3.5 0.00012 43.6 4.9 35 50-86 326-361 (615)
461 4e4t_A Phosphoribosylaminoimid 71.6 4.1 0.00014 41.1 5.3 32 50-83 35-66 (419)
462 3ond_A Adenosylhomocysteinase; 71.6 3.4 0.00012 42.5 4.6 33 50-84 265-297 (488)
463 3fi9_A Malate dehydrogenase; s 71.5 3.8 0.00013 40.2 4.9 35 50-84 8-43 (343)
464 2yg5_A Putrescine oxidase; oxi 71.4 2.3 8E-05 42.9 3.5 54 160-228 213-267 (453)
465 2rir_A Dipicolinate synthase, 71.3 4 0.00014 39.0 4.9 33 50-84 157-189 (300)
466 2rcy_A Pyrroline carboxylate r 71.3 3.1 0.00011 38.6 4.0 32 51-84 5-40 (262)
467 1m6i_A Programmed cell death p 71.3 1.4 4.9E-05 45.4 1.8 37 48-84 9-45 (493)
468 3ba1_A HPPR, hydroxyphenylpyru 71.2 8.1 0.00028 37.6 7.2 33 50-84 164-196 (333)
469 3d4o_A Dipicolinate synthase s 71.0 4.2 0.00014 38.8 5.0 33 50-84 155-187 (293)
470 2vqe_M 30S ribosomal protein S 71.0 2.7 9.2E-05 34.9 3.0 39 362-400 24-62 (126)
471 4gwg_A 6-phosphogluconate dehy 70.9 3.7 0.00013 42.3 4.8 33 50-84 4-36 (484)
472 2zqz_A L-LDH, L-lactate dehydr 70.8 4.1 0.00014 39.7 4.9 35 50-84 9-43 (326)
473 3o8q_A Shikimate 5-dehydrogena 70.6 4.6 0.00016 38.4 5.1 32 50-83 126-158 (281)
474 1pgj_A 6PGDH, 6-PGDH, 6-phosph 70.6 3.4 0.00012 42.5 4.5 31 52-84 3-33 (478)
475 2pgd_A 6-phosphogluconate dehy 70.6 3.6 0.00012 42.3 4.7 32 51-84 3-34 (482)
476 1ez4_A Lactate dehydrogenase; 70.5 4 0.00014 39.6 4.7 35 50-84 5-39 (318)
477 3fbt_A Chorismate mutase and s 70.4 4 0.00014 38.9 4.6 33 50-84 122-155 (282)
478 2hk9_A Shikimate dehydrogenase 70.2 3.1 0.0001 39.4 3.8 33 50-84 129-161 (275)
479 1yb4_A Tartronic semialdehyde 70.0 2.3 7.8E-05 40.3 2.8 30 51-82 4-33 (295)
480 3pwz_A Shikimate dehydrogenase 69.9 4.5 0.00015 38.3 4.8 33 50-84 120-153 (272)
481 3vku_A L-LDH, L-lactate dehydr 69.9 3.4 0.00012 40.3 4.0 35 50-84 9-43 (326)
482 1x0v_A GPD-C, GPDH-C, glycerol 69.8 2.2 7.4E-05 41.8 2.7 32 51-84 9-47 (354)
483 3tri_A Pyrroline-5-carboxylate 69.7 4.9 0.00017 38.1 5.1 32 51-84 4-38 (280)
484 2dvm_A Malic enzyme, 439AA lon 69.7 4.1 0.00014 41.4 4.7 31 50-82 186-219 (439)
485 3t4e_A Quinate/shikimate dehyd 69.5 4.7 0.00016 39.0 5.0 33 50-84 148-181 (312)
486 2qrj_A Saccharopine dehydrogen 69.3 4.4 0.00015 40.5 4.7 32 50-83 214-249 (394)
487 1tt5_B Ubiquitin-activating en 69.2 4.8 0.00016 40.9 5.1 35 50-86 40-75 (434)
488 4gx0_A TRKA domain protein; me 69.2 4.1 0.00014 42.7 4.9 32 51-84 349-380 (565)
489 2dbq_A Glyoxylate reductase; D 69.1 6.6 0.00023 38.2 6.0 33 50-84 150-182 (334)
490 1mld_A Malate dehydrogenase; o 69.1 4.3 0.00015 39.3 4.6 32 52-85 2-36 (314)
491 1y8q_A Ubiquitin-like 1 activa 69.0 3.7 0.00013 40.3 4.2 34 50-85 36-70 (346)
492 2axq_A Saccharopine dehydrogen 68.8 3 0.0001 42.9 3.5 34 50-84 23-56 (467)
493 3d1l_A Putative NADP oxidoredu 68.7 3.7 0.00013 38.3 4.0 32 51-84 11-43 (266)
494 3ew7_A LMO0794 protein; Q8Y8U8 68.4 5.2 0.00018 35.5 4.8 31 52-84 2-33 (221)
495 3ojo_A CAP5O; rossmann fold, c 68.4 3.7 0.00013 41.6 4.1 32 51-84 12-43 (431)
496 3h2s_A Putative NADH-flavin re 68.2 5.3 0.00018 35.7 4.8 31 52-84 2-33 (224)
497 3qlj_A Short chain dehydrogena 68.2 5.6 0.00019 38.3 5.3 32 51-84 28-60 (322)
498 1leh_A Leucine dehydrogenase; 67.9 5 0.00017 39.7 4.9 32 50-83 173-204 (364)
499 3gpi_A NAD-dependent epimerase 67.8 5.7 0.0002 37.1 5.1 32 51-84 4-35 (286)
500 3r6d_A NAD-dependent epimerase 67.8 6.8 0.00023 35.0 5.5 31 52-84 7-39 (221)
No 1
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-74 Score=598.35 Aligned_cols=380 Identities=29% Similarity=0.504 Sum_probs=333.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
+++||+|||||++|++||+.|++ .|.+|+|||+. .+|+++.++|+|+||+++..... ..|....+.+....+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~--~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~-----~~~~~~~~~~~~~~l 98 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGK--RGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASP-----RNFLSGNPHFCKSAL 98 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSG-----GGEEESSTTTTHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCH-----HHHhhcCHHHHHHHH
Confidence 46899999999999999999999 68999999955 78899999999999999965432 122222334555667
Q ss_pred hcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEee
Q 011458 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEK 207 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 207 (485)
..|.+.+.++|++..|+++.....+++|| ...+..+.+.|.+.+++.|| +++++++|++|..++ +.+.|.+.+
T Consensus 99 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv----~i~~~~~V~~i~~~~--~~~~V~~~~ 171 (417)
T 3v76_A 99 ARYRPQDFVALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGV----QLRLETSIGEVERTA--SGFRVTTSA 171 (417)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTC----EEECSCCEEEEEEET--TEEEEEETT
T ss_pred HhcCHHHHHHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCC----EEEECCEEEEEEEeC--CEEEEEECC
Confidence 88999999999999999999988999998 67889999999999999999 999999999998775 668888774
Q ss_pred ecCCceEEEEcCeEEEecCCC--------chhHHHHHHCCCceecCCCceeEEEeCC---cccccccCcccccEEEEEEe
Q 011458 208 RTMNLVECIEADYLLIASGSS--------QQGHRLAAQLGHSIVDPVPSLFTFKIAD---SQLTELSGVSFPKVVAKLKL 276 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~--------~~g~~la~~~G~~i~~~~p~l~~~~~~~---~~~~~l~G~~~~~~~~~~~~ 276 (485)
+ .++||.||+|||+. ++++.+++++|++++++.|+++++.+.+ ++++.|+|++++ +.+++
T Consensus 172 -----g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~~l~G~~~~-~~~~~-- 242 (417)
T 3v76_A 172 -----G-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAAD-AEARF-- 242 (417)
T ss_dssp -----E-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCCEEEEEEESCCEECCHHHHHHTGGGTTCEEE-EEEEE--
T ss_pred -----c-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCCEecccceeeeEEecCccccccccCCCCcee-EEEEE--
Confidence 4 89999999999965 4789999999999999999999999987 667899999986 66654
Q ss_pred cCccCCCCccceecCeEEeeccccchhHhhccHHHHHHHHccCceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhh
Q 011458 277 ENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNS 356 (485)
Q Consensus 277 ~~~~~~~~~~~~~Ge~lft~~GiSG~~il~lS~~~~~~~~~~~~~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~ 356 (485)
++ ....||++|||||+|||+||++|+++. ....+.||++|+++.+++ +.+....++++.+.+.
T Consensus 243 ~~-------~~~~~~~lft~~G~sGp~il~~S~~~~-------~~~~~~id~~p~~~~~~~---~~~~~~~~~~~~~~~~ 305 (417)
T 3v76_A 243 GK-------AAFREAVLITHRGLSGPAILQISSYWR-------EGEEIVLRLMPDIDIASI---LKGMRRANGRQAVQTA 305 (417)
T ss_dssp TT-------EEEEEEEEECSSEEESHHHHHHTTTCC-------TTCCEEEEESTTSCHHHH---HHHHHHHTCSSBHHHH
T ss_pred CC-------EeeeeeeEEECCCcchHHHHHHHHHhh-------CCCEEEEECCCCCCHHHH---HHHHHHhchhhhHHHH
Confidence 32 345789999999999999999998752 124688999999997654 5566667788889999
Q ss_pred CCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhccCeEEEcccCCCceeEEeeCCcCCCCCCcccccccCC
Q 011458 357 CPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIH 436 (485)
Q Consensus 357 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~ 436 (485)
+.. .||+++++.+++.+++ +++++++++++++++|+..||++||++.|+.+|++|+||+|||+++||||+|||||.+
T Consensus 306 l~~--~lp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GGV~~~ei~~~tmesk~~ 382 (417)
T 3v76_A 306 LAD--ILPRRLAQFFADEAKL-TGRMLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRTMQAKEV 382 (417)
T ss_dssp HTT--TSCHHHHHHHHHHTTC-TTCBGGGCCHHHHHHHHHHHHSEEECCCEECCTTTCSEEEEEECGGGBCTTTCBBTTS
T ss_pred HHH--HhhHHHHHHHHHhcCC-CCCchhhCCHHHHHHHHHHhcCCEEEecccCCcceEEEeCCCCccccCChhhccccCC
Confidence 887 8999999999999999 8899999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHH
Q 011458 437 PRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSI 471 (485)
Q Consensus 437 ~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a 471 (485)
||||||||+|||||+||||||||||+|||+||+++
T Consensus 383 ~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~~ 417 (417)
T 3v76_A 383 PGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV 417 (417)
T ss_dssp TTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCcC
Confidence 99999999999999999999999999999999863
No 2
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=100.00 E-value=1.8e-70 Score=566.55 Aligned_cols=382 Identities=27% Similarity=0.433 Sum_probs=328.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
++||+|||||++|++||+.|++ .|.+|+|||+. .+|+++.++|+|+||++|..+.+ ...+.. ...+....+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~--~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~----~~~~~~-~~~~~~~~l~ 76 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK--LGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTP----AHYLSQ-NPHFVKSALA 76 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCG----GGEECS-CTTSTHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHh--CCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCH----HHhccC-CHHHHHHHHH
Confidence 4899999999999999999999 68999999965 68899999999999999875432 122332 3445556677
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEc----CCCCeEEEE
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSD----NAGRKFLLK 204 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~----~~~~~~~V~ 204 (485)
.|.+.+..+|++..|+++.....+++||.+ .+..+++.|.+.+++.|| +++++++|+++..+ + +.+.|.
T Consensus 77 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~-~~~~l~~~L~~~~~~~Gv----~i~~~~~v~~i~~~~~g~~--~~~~v~ 149 (401)
T 2gqf_A 77 RYTNWDFISLVAEQGITYHEKELGQLFCDE-GAEQIVEMLKSECDKYGA----KILLRSEVSQVERIQNDEK--VRFVLQ 149 (401)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEETT-CTHHHHHHHHHHHHHHTC----EEECSCCEEEEEECCSCSS--CCEEEE
T ss_pred hCCHHHHHHHHHhCCCceEECcCCEEccCC-CHHHHHHHHHHHHHHCCC----EEEeCCEEEEEEcccCcCC--CeEEEE
Confidence 889999999999999998887889999977 889999999999999999 99999999999876 4 347777
Q ss_pred EeeecCCceEEEEcCeEEEecCCCc--------hhHHHHHHCCCceecCCCceeEEEe-CCccc-ccccCcccccEEEEE
Q 011458 205 VEKRTMNLVECIEADYLLIASGSSQ--------QGHRLAAQLGHSIVDPVPSLFTFKI-ADSQL-TELSGVSFPKVVAKL 274 (485)
Q Consensus 205 ~~~~~~~~~~~i~ad~VIlAtG~~~--------~g~~la~~~G~~i~~~~p~l~~~~~-~~~~~-~~l~G~~~~~~~~~~ 274 (485)
+.+ ..++||.||+|||+.+ +++.+++++|+++.|+.|.++++.+ .++++ +.|+|++++ ..+.+
T Consensus 150 ~~~------g~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~-~~~~i 222 (401)
T 2gqf_A 150 VNS------TQWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLP-VTITA 222 (401)
T ss_dssp ETT------EEEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEE-EEEEE
T ss_pred ECC------CEEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccCCCeeee-eEEEE
Confidence 663 3799999999999654 7899999999999999999999986 44445 889999985 55544
Q ss_pred EecCccCCCCccceecCeEEeeccccchhHhhccHHHHHHHHccCceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhh
Q 011458 275 KLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVL 354 (485)
Q Consensus 275 ~~~~~~~~~~~~~~~Ge~lft~~GiSG~~il~lS~~~~~~~~~~~~~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~ 354 (485)
. ++ ....||++|||+|+|||++|++|+++.+ ...+.||++|+++.+++. ......++++.+.
T Consensus 223 ~--G~------~~~~g~~l~t~~g~sG~~~l~~s~~~~~-------~~~~~i~~~p~~~~~~~~---~~~~~~~~~~~~~ 284 (401)
T 2gqf_A 223 L--CG------KSFYNQLLFTHRGISGPAVLQISNYWQP-------TESVEIDLLPNHNVEEEI---NQAKQSSPKQMLK 284 (401)
T ss_dssp T--TS------CEEEEEEEECSSEEESHHHHHHTTTCCT-------TCCEEEESCSSSCHHHHH---HHHHHHCTTSBHH
T ss_pred c--CC------ceEEeCEEEECCCccHHHHHHHHHHHhc-------CCEEEEECCCCCCHHHHH---HHHhhhcccccHH
Confidence 2 31 1255999999999999999999987521 257889999999987763 2222256788899
Q ss_pred hhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhccCeEEEcccCCCceeEEeeCCcCCCCCCccccccc
Q 011458 355 NSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESK 434 (485)
Q Consensus 355 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~esk 434 (485)
+.+.. .||+++++.|++..+++ +++++++++++++.|+..||+++|.++|+.+|++|+||+|||+++||||+|||||
T Consensus 285 ~~l~~--~lp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GGv~~~~~~~~tmes~ 361 (401)
T 2gqf_A 285 TILVR--LLPKKLVELWIEQGIVQ-DEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVTMGGVDTKVISSKTMESN 361 (401)
T ss_dssp HHHTT--TSCHHHHHHHHHTTSSC-CCBGGGCCHHHHHHHHHHHHCEEECCSEECCTTTCSEEEEEECGGGBCTTTCBBS
T ss_pred HHhhh--hcCHHHHHHHHHHcCCC-CCchhhCCHHHHHHHHHHHhcCEEEecccCCcceeEEeCCccccccCChhhcccc
Confidence 99987 89999999999999998 6889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhH
Q 011458 435 IHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGK 473 (485)
Q Consensus 435 ~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~ 473 (485)
.+||||||||+|||||+||||||||||+|||+||++|++
T Consensus 362 ~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 362 QVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp SSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999864
No 3
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=100.00 E-value=5.7e-66 Score=540.82 Aligned_cols=409 Identities=31% Similarity=0.504 Sum_probs=349.3
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
.+++||+|||||++|+++|+.|++ .|.+|+|||+. .+|+++.++|+++|++++.. .+..+...+.... .+....
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~--~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~--~~~~~~~~~~~~~-~~~~~~ 98 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAE--EGANVLLLDKGNKLGRKLAISGGGRCNVTNRL--PLDEIVKHIPGNG-RFLYSA 98 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHTGGGTCCCEECS--CHHHHHHTCTBTG-GGGHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHH--CCCCEEEEECCCCCCceeEEeCCCceeccCcc--cHHHHHHHhccCh-HHHHHH
Confidence 456899999999999999999999 68999999965 68888889999999998853 2335555555433 344455
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEe
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVE 206 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~ 206 (485)
+..+...+.++|++..|+++.....+++||.+..+..+++.|.+.+++.|| +|+++++|++|..++ +..+.|.+.
T Consensus 99 ~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV----~i~~~~~V~~i~~~~-~~v~~V~~~ 173 (447)
T 2i0z_A 99 FSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGV----KIRTNTPVETIEYEN-GQTKAVILQ 173 (447)
T ss_dssp HHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTC----EEECSCCEEEEEEET-TEEEEEEET
T ss_pred HHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCC----EEEeCcEEEEEEecC-CcEEEEEEC
Confidence 567888899999999999998877899999888899999999999999999 999999999998764 344788876
Q ss_pred eecCCceEEEEcCeEEEecCCC--------chhHHHHHHCCCceecCCCceeEEEeCCccccc--ccCcccccEEEEEE-
Q 011458 207 KRTMNLVECIEADYLLIASGSS--------QQGHRLAAQLGHSIVDPVPSLFTFKIADSQLTE--LSGVSFPKVVAKLK- 275 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~~--------~~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~--l~G~~~~~~~~~~~- 275 (485)
+ +..++||.||+|||+. ++|+.+++++|+++.++.|.++++.+.+++.+. +.|+++.++.+.+.
T Consensus 174 ~-----G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (447)
T 2i0z_A 174 T-----GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRDRSLQGLALRDINLSVLN 248 (447)
T ss_dssp T-----CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCEEEEEECSCCEECCCHHHHTTTTTTCEEEEEEEEECC
T ss_pred C-----CCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCcccCcceeeeeecCCcccccccccCcccCCeEEEEEe
Confidence 4 4569999999999964 478999999999999999999999988777666 88988655555553
Q ss_pred ecCccCCCCccceecCeEEeeccccchhHhhccHHHHHHHHccC-ceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhh
Q 011458 276 LENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSSC-YKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVL 354 (485)
Q Consensus 276 ~~~~~~~~~~~~~~Ge~lft~~GiSG~~il~lS~~~~~~~~~~~-~~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~ 354 (485)
.++ ++.+.+.||++|||||+|||++|++|+++.+.+.... ....+.+|++|.++.+++.+.|.+.....+++++.
T Consensus 249 ~~g----~r~~~~~ge~~~t~~~~~g~~~l~~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~l~ 324 (447)
T 2i0z_A 249 PKG----KAIISHKMDMLFTHFGLSGPAALRCSQFVVKALKKFKTNTIQMSIDALPEENSEQLFQRMLKQMKEDPKKGIK 324 (447)
T ss_dssp --------CEEEEEEEEEECSSEEESHHHHHHHHHHHHHHHHHCCSCEEEEEESCTTSCHHHHHHHHHHHHTTSTTSBHH
T ss_pred cCC----ceEecccCCeEEECCcccHHHHHHHHHHHHHHHhcccCCceEEEEECCCCCCHHHHHHHHHHHHHhChhhhHH
Confidence 333 2346677999999999999999999988765552211 12568899999999999988888777777888899
Q ss_pred hhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhccCeEEEcccCCCceeEEeeCCcCCCCCCccccccc
Q 011458 355 NSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESK 434 (485)
Q Consensus 355 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~esk 434 (485)
+.+.. .+|+++++.+++..+++++++++++++++++.|...++++||++.++.+|..|+||+|||+++|+|++|||||
T Consensus 325 ~~l~~--~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~T~GGv~~~~i~~~t~~~~ 402 (447)
T 2i0z_A 325 NVLKG--YVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSK 402 (447)
T ss_dssp HHTTT--SSCHHHHHHHHHHTTCCTTSBGGGSCHHHHHHHHHHHHHEEEEECEECCGGGCSSEEEEECGGGEETTTTEES
T ss_pred Hhccc--cChHHHHHHHHHHcCCCcCCchhhCCHHHHHHHHHHhhCCEEEecCCCCccEEEEeCCceeeecccccccccC
Confidence 98876 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHhhh
Q 011458 435 IHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSND 477 (485)
Q Consensus 435 ~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~~~ 477 (485)
.+||||||||++||||+||||||||||+|||+||++|+++++.
T Consensus 403 ~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~~ 445 (447)
T 2i0z_A 403 FTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAKM 445 (447)
T ss_dssp SSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999987643
No 4
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.94 E-value=8.4e-26 Score=243.25 Aligned_cols=377 Identities=20% Similarity=0.199 Sum_probs=213.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCC-------cchHHHhhcc-----
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHC-------ADKMILAGHY----- 115 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~-------~~~~~~~~~~----- 115 (485)
..+||||||||++|++||+.|++ .|.+|+|||+. ..+++...++++.+ ..+... ..+..++..+
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~--~G~~V~vlEk~~~~gg~s~~a~gg~~-~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 201 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATD--SGAKVILIEKEPVIGGNAKLAAGGMN-AAWTDQQKAKKITDSPELMFEDTMKGGQ 201 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTGGGCCSCEE-CSSCHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCchhhcCceEE-eCCCHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 46899999999999999999999 68999999965 56666666666543 332210 1111222111
Q ss_pred CCCCccchhhHhhcCChHHHHHHHHhcCCceee--cCCCeeeec-----C--CChHHHHHHHHHHHHHCCCCCccEEEeC
Q 011458 116 PRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKT--EDDGRVFPV-----S--DSSSSVIDCLLTEAKHRGVAPSVVLQTG 186 (485)
Q Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~--~~~g~~~p~-----~--~~a~~v~~~L~~~l~~~GV~~~~~i~~~ 186 (485)
....+.++..+ .. ...+.++|+.+.|+++.. ...+..+|. . .....+.+.|.+.+++.|| +|+++
T Consensus 202 ~~~~~~~~~~~-~~-~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv----~i~~~ 275 (571)
T 1y0p_A 202 NINDPALVKVL-SS-HSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNI----DLRMN 275 (571)
T ss_dssp TCSCHHHHHHH-HH-HHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC----EEESS
T ss_pred CCCCHHHHHHH-HH-ccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCC----EEEeC
Confidence 01122332222 12 345678999999988742 223333332 1 2357889999999999999 99999
Q ss_pred ceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC--------------------------CchhHHHHHHCCC
Q 011458 187 KVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------------------SQQGHRLAAQLGH 240 (485)
Q Consensus 187 ~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------------------~~~g~~la~~~G~ 240 (485)
++|++|..++++..++|.+.+ .+++...+.||.||+|||+ +++|+.++.++|+
T Consensus 276 ~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~n~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~~~Ga 354 (571)
T 1y0p_A 276 TRGIEVLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDVAENAGG 354 (571)
T ss_dssp EEEEEEEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBCSCTTCSSHHHHHHHHTTC
T ss_pred CEeeEeEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCCcccCHHHHHHhCccccCCcccCCCCCchHHHHHHHHcCC
Confidence 999999876313445566542 1222347999999999996 2468899999999
Q ss_pred ceecCCCce-eEEEeCCcccccccCcccccEEEEEEecCccCCCCccceecCeEEeeccccchhHhhccHHHHHHHHcc-
Q 011458 241 SIVDPVPSL-FTFKIADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSS- 318 (485)
Q Consensus 241 ~i~~~~p~l-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~GiSG~~il~lS~~~~~~~~~~- 318 (485)
.+..+.... .|........-...+++... .+-+..+| +++ ..|+ ..+.+.+ +.+.+.
T Consensus 355 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g-~i~vn~~G----~RF---~~E~--~~~~~~~-----------~a~~~~~ 413 (571)
T 1y0p_A 355 ALKDMQYIQAHPTLSVKGGVMVTEAVRGNG-AILVNREG----KRF---VNEI--TTRDKAS-----------AAILAQT 413 (571)
T ss_dssp CEECTTCEEEEEEEETTTCSBCCTHHHHTT-CEEECTTS----CCC---SCTT--SCHHHHH-----------HHHHTSG
T ss_pred cEeCCcceeecCcccCCCCceeeecccCCc-eEEECCCC----CCC---cCCC--CcHhHHH-----------HHHHhCc
Confidence 988754322 22222211000011122221 12221122 122 1222 1121111 122111
Q ss_pred CceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHH-
Q 011458 319 CYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARL- 397 (485)
Q Consensus 319 ~~~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~- 397 (485)
+....+.+|- ..++. .. .....+..-. ......+++|+++.+++++...+.+ ++++.++..
T Consensus 414 ~~~~~~i~d~------~~~~~-~~-----~~~~~~~~g~----~~~~~tl~ela~~~gi~~~~l~~tv--~~yn~~~~~g 475 (571)
T 1y0p_A 414 GKSAYLIFDD------SVRKS-LS-----KIDKYIGLGV----APTADSLVKLGKMEGIDGKALTETV--ARYNSLVSSG 475 (571)
T ss_dssp GGCEEEEEEH------HHHHH-CT-----THHHHHHHTC----CCEESSHHHHHHHHTSCHHHHHHHH--HHHHHHHHHT
T ss_pred CCCEEEEECh------HHHhh-hh-----hHHHHhhCCe----EEEeCCHHHHHHHhCcCHHHHHHHH--HHHHHHHHcC
Confidence 1223443432 11100 00 0000000000 1112335666667777765444433 355555543
Q ss_pred -------------hccCeEEEcccCCCceeEEeeCCcCCCCCCc-ccccccCCCCeEEEEeeee-ccc--CcchHHHHHH
Q 011458 398 -------------LKHCTLEVAGKGQFKDEFVTAGGVPLSEISL-NTMESKIHPRLFFAGEVLN-VDG--VTGGFNFQNA 460 (485)
Q Consensus 398 -------------l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~-~t~esk~~~gLy~~GE~lD-v~g--~~GGynl~~A 460 (485)
+.+-||+..... ..+..|+|||.+|+--. -+-+.+.|||||+|||+.. ++| +.||.+|.+|
T Consensus 476 ~D~~f~k~~~~~~i~~~Pfya~~~~--p~~~~t~GGl~id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~ 553 (571)
T 1y0p_A 476 KDTDFERPNLPRALNEGNYYAIEVT--PGVHHTMGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDI 553 (571)
T ss_dssp CCTTTCCSCCCCCSCSSCEEEEEEE--EEEEEECCEEEBCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHH
T ss_pred CCcccCCCCCCCcCCCCCEEEEEEe--eeeeEecCCeEECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHH
Confidence 223465543332 23678999999986331 1223579999999999764 655 6799999999
Q ss_pred HHHHHHHHHHHhHHhh
Q 011458 461 WSGGYIAGTSIGKLSN 476 (485)
Q Consensus 461 ~~sG~~AG~~a~~~~~ 476 (485)
+++||+||++|+++++
T Consensus 554 ~~fGr~Ag~~aa~~~~ 569 (571)
T 1y0p_A 554 ITFGRLAGEEAAKYSK 569 (571)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998765
No 5
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.94 E-value=1.2e-25 Score=241.73 Aligned_cols=378 Identities=19% Similarity=0.182 Sum_probs=214.9
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCC-------cchHHHhhcc----
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHC-------ADKMILAGHY---- 115 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~-------~~~~~~~~~~---- 115 (485)
+.++||||||||++|++||+.|++ .|.+|+|||+. .++++...++++.+ ..+... .....+...+
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~--~G~~V~vlEk~~~~gg~s~~s~gg~~-~~~~~~~~~~g~~ds~~~~~~~~~~~~ 195 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKK--AGANVILVDKAPFSGGNSMISAGGMN-AVGTKQQTAHGVEDKVEWFIEDAMKGG 195 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHH--HTCCEEEECSSSSSCTTGGGCCSCEE-CSSCHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCcccccCceeE-ccCCHHHHHhCCCCCHHHHHHHHHHhc
Confidence 456899999999999999999999 68999999965 56666666666653 332110 1111221111
Q ss_pred -CCCCccchhhHhhcCChHHHHHHHHhcCCceee--cCCCeeeecC-------CChHHHHHHHHHHHHHCCCCCccEEEe
Q 011458 116 -PRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKT--EDDGRVFPVS-------DSSSSVIDCLLTEAKHRGVAPSVVLQT 185 (485)
Q Consensus 116 -~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~--~~~g~~~p~~-------~~a~~v~~~L~~~l~~~GV~~~~~i~~ 185 (485)
....+.++..+. . ...+.++|+.+.|+++.. ...+..+|.. .....+++.|.+.+++.|| +|++
T Consensus 196 ~~~~~~~~~~~~~-~-~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv----~i~~ 269 (566)
T 1qo8_A 196 RQQNDIKLVTILA-E-QSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGI----DTRL 269 (566)
T ss_dssp TTCSCHHHHHHHH-H-HHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTC----CEEC
T ss_pred CCCCCHHHHHHHH-h-ccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCC----EEEe
Confidence 111222322221 2 345778999999988753 1234433321 1267789999999999999 9999
Q ss_pred CceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC--------------------------CchhHHHHHHCC
Q 011458 186 GKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------------------SQQGHRLAAQLG 239 (485)
Q Consensus 186 ~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------------------~~~g~~la~~~G 239 (485)
+++|++|..++++..++|.+.+ .+++...+.||.||+|||+ +++|+.++.++|
T Consensus 270 ~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~~~G 348 (566)
T 1qo8_A 270 NSRVVKLVVNDDHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMAKEIG 348 (566)
T ss_dssp SEEEEEEEECTTSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCEECSCTTCSCHHHHHHHHTT
T ss_pred CCEEEEEEECCCCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcccCHHHHHHhCccccCCcccCCCCCCcHHHHHHHHcC
Confidence 9999999876312344566542 1222347999999999995 246789999999
Q ss_pred CceecCCCce-eEEEeCCcccccccCccccc-EEEEEEecCccCCCCccceecCeEEeeccccchhHhhccHHHHHHHHc
Q 011458 240 HSIVDPVPSL-FTFKIADSQLTELSGVSFPK-VVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFS 317 (485)
Q Consensus 240 ~~i~~~~p~l-~~~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~Ge~lft~~GiSG~~il~lS~~~~~~~~~ 317 (485)
+.+.++.... .|...... ..+....+.. ..+-+..+| +++.. |+ ..+...+.+++. .
T Consensus 349 a~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~g~i~vn~~G----~Rf~~---E~--~~~~~~~~~~~~----------~ 407 (566)
T 1qo8_A 349 ASMTDIDWVQAHPTVGKDS--RILISETVRGVGAVMVNKDG----NRFIS---EL--TTRDKASDAILK----------Q 407 (566)
T ss_dssp BCEESTTCEEEEEEEESSS--CSBCCTHHHHTTCEEECTTS----CCCSC---TT--SCHHHHHHHHHT----------S
T ss_pred CeEecCcceeecccccCCc--cccchhhhccCCeEEECCCC----CCccC---CC--CCHHHHHHHHHh----------C
Confidence 9988765543 23211111 1111111100 012122122 12221 22 112211222211 1
Q ss_pred cCceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHH
Q 011458 318 SCYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARL 397 (485)
Q Consensus 318 ~~~~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~ 397 (485)
.+....+.+|- .... .. ..... .+..-. ......+++|++..+++++.....+ ++++..+..
T Consensus 408 ~~~~~~~i~d~------~~~~-~~-~~~~~----~~~~~~----~~~~~tl~eLa~~~gi~~~~l~~tv--~~yn~~~~~ 469 (566)
T 1qo8_A 408 PGQFAWIIFDN------QLYK-KA-KMVRG----YDHLEM----LYKGDTVEQLAKSTGMKVADLAKTV--SDYNGYVAS 469 (566)
T ss_dssp GGGCEEEEEEH------HHHH-HC-HHHHH----HHHTTC----CEEESSHHHHHHHTTCCHHHHHHHH--HHHHHHHHH
T ss_pred CCCcEEEEECh------HHhh-hh-hhhHH----HhhcCc----EEEeCCHHHHHHHhCCCHHHHHHHH--HHHHHHHhc
Confidence 11123333331 1111 00 00000 000000 1223345677777777765443332 355666543
Q ss_pred --------------hccCeEEEcccCCCceeEEeeCCcCCCCCCc-ccccccCCCCeEEEEeee-eccc--CcchHHHHH
Q 011458 398 --------------LKHCTLEVAGKGQFKDEFVTAGGVPLSEISL-NTMESKIHPRLFFAGEVL-NVDG--VTGGFNFQN 459 (485)
Q Consensus 398 --------------l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~-~t~esk~~~gLy~~GE~l-Dv~g--~~GGynl~~ 459 (485)
+.+-||+..... ..+..|+|||.+|+--. .+-+.+.|||||+|||+. .++| +.||.+|.+
T Consensus 470 g~d~~fg~~~~~~~i~~~Pfya~~~~--p~~~~t~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~ 547 (566)
T 1qo8_A 470 GKDTAFGRADMPLNMTQSPYYAVKVA--PGIHHTMGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIAD 547 (566)
T ss_dssp SCCTTTCCSCCCCCSCSSSEEEEEEE--EEEEEECCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHH
T ss_pred CCCcccCCCCCCCcCCCCCEEEEEEe--cccceecccEEECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHH
Confidence 223455543332 33678999999986331 112357999999999976 4555 679999999
Q ss_pred HHHHHHHHHHHHhHHhh
Q 011458 460 AWSGGYIAGTSIGKLSN 476 (485)
Q Consensus 460 A~~sG~~AG~~a~~~~~ 476 (485)
|+++||+||++|+++++
T Consensus 548 ~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 548 TVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998775
No 6
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.93 E-value=1.5e-24 Score=233.75 Aligned_cols=353 Identities=16% Similarity=0.131 Sum_probs=208.2
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCC--cceeecCCCceeccCCCCcchHHHhhc-c--C--CCCcc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL--SKVKISGGGRCNVTNGHCADKMILAGH-Y--P--RGHKE 121 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g--~k~~~sG~g~~n~tn~~~~~~~~~~~~-~--~--~~~~~ 121 (485)
.++||||||||++|++||++|++ .|.+|+||||.... .+..++|+..|+..+.....+..++.. + . .....
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~--~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~ 83 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQ--SGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQD 83 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHH--CCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHH
Confidence 35799999999999999999999 68999999976443 455556666665554211112111111 1 0 01122
Q ss_pred chhhHhhcCChHHHHHHHHhcCCceeecCCCeeeecC---------------------CChHHHHHHHHHHHHHCCCCCc
Q 011458 122 FRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVS---------------------DSSSSVIDCLLTEAKHRGVAPS 180 (485)
Q Consensus 122 ~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~---------------------~~a~~v~~~L~~~l~~~GV~~~ 180 (485)
.+..+ .. ...+.++|+.++|+++....++.+++.. .....++..|.+.+++.||
T Consensus 84 ~v~~~-~~-~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv--- 158 (588)
T 2wdq_A 84 AIEYM-CK-TGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHT--- 158 (588)
T ss_dssp HHHHH-HH-HHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHH-HH-hHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCC---
Confidence 22221 11 1346788999999988765445443311 1236788999999999999
Q ss_pred cEEEeCceEEEEEEc-CCCCeEEEEEeeecCCceEEEEcCeEEEecCC--------------CchhHHHHHHCCCceecC
Q 011458 181 VVLQTGKVVTTASSD-NAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVDP 245 (485)
Q Consensus 181 ~~i~~~~~V~~i~~~-~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~~~g~~la~~~G~~i~~~ 245 (485)
+|++++.|++|..+ + +.+.+|...+..+++...+.|+.||+|||+ +|+|+.|+..+|+.+.++
T Consensus 159 -~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa~l~~m 236 (588)
T 2wdq_A 159 -TIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDM 236 (588)
T ss_dssp -EEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECT
T ss_pred -EEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCCCEeCh
Confidence 99999999999885 4 455666654211233347999999999995 467999999999999876
Q ss_pred CCcee-EEEeCCcccccc--cCcccccEEEEEEecCccCCCCccceecCeEEeecc----ccchhHhhccHHHHHHHHcc
Q 011458 246 VPSLF-TFKIADSQLTEL--SGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWG----LSGPVILRLSAWGARYLFSS 318 (485)
Q Consensus 246 ~p~l~-~~~~~~~~~~~l--~G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~G----iSG~~il~lS~~~~~~~~~~ 318 (485)
....+ |....... .+ .+++-.. .+-+ +. .|+-+...|. -..|- --+++.+..++.+.
T Consensus 237 e~~q~hpt~~~~~~--~l~~e~~rg~g-~ilv--n~----------~G~RF~~~~~~~~~el~~r-d~v~~ai~~~~~~~ 300 (588)
T 2wdq_A 237 EMWQFHPTGIAGAG--VLVTEGCRGEG-GYLL--NK----------HGERFMERYAPNAKDLAGR-DVVARSIMIEIREG 300 (588)
T ss_dssp TCEEEEEEEETTTC--CBCCTHHHHTT-CEEE--CT----------TCCCTHHHHCTTTGGGSCH-HHHHHHHHHHHHTT
T ss_pred hHhheecceecCCc--ceeeehhccCC-cEEE--CC----------CCCCCccccCcccchhccH-HHHHHHHHHHHHhC
Confidence 54322 22221110 01 0111111 1112 21 2232222221 00110 01122233333332
Q ss_pred Cc-----eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhc-CCCCCCccccCCHHHHH
Q 011458 319 CY-----KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGRE-GLSGDTLWASVSNNSLI 392 (485)
Q Consensus 319 ~~-----~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~-~~~~~~~~~~l~~~~~~ 392 (485)
.. ...+.+|+- .+..+. + .. .+| .+..++++. |+|+.+
T Consensus 301 ~~~~~~~~~~v~ld~~-~~~~~~----~------------~~------~~~--~i~e~~~~~~GiD~~~----------- 344 (588)
T 2wdq_A 301 RGCDGPWGPHAKLKLD-HLGKEV----L------------ES------RLP--GILELSRTFAHVDPVK----------- 344 (588)
T ss_dssp CSBCSTTCSBEEEECG-GGHHHH----H------------HH------HCH--HHHHHHHHHTCCCTTT-----------
T ss_pred CCccCCCCCeEEEecc-cCCHHH----H------------HH------Hhh--HHHHHHHHhCCCCCCC-----------
Confidence 11 112444431 111111 1 11 111 244556654 888753
Q ss_pred HHHHHhccCeEEEcccCCCceeEEeeCCcCCCCCCccccc------ccCCCCeEEEEeee--eccc--CcchHHHHHHHH
Q 011458 393 SIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTME------SKIHPRLFFAGEVL--NVDG--VTGGFNFQNAWS 462 (485)
Q Consensus 393 ~l~~~l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~e------sk~~~gLy~~GE~l--Dv~g--~~GGynl~~A~~ 462 (485)
.|+++.. .+..|+|||.+|+-. +++. .+.|||||+|||+. .++| +.||.+|..|++
T Consensus 345 --------~~i~v~p-----~~h~t~GGi~vd~~~-~vl~~~~~~~g~~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~v 410 (588)
T 2wdq_A 345 --------EPIPVIP-----TCHYMMGGIPTKVTG-QALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVV 410 (588)
T ss_dssp --------SCEEEEE-----EEEEECCBEEBCTTC-EEEEECTTSCEEEEEEEEECGGGEECSSSTTSCCTTHHHHHHHH
T ss_pred --------CcEEEec-----cccccCceEEECCCC-CCcccccccCCCeeCCceeCccccccCCCCCCCCcchhHHHHHH
Confidence 2455543 367899999998643 5553 35899999999975 5776 569999999999
Q ss_pred HHHHHHHHHhHHhh
Q 011458 463 GGYIAGTSIGKLSN 476 (485)
Q Consensus 463 sG~~AG~~a~~~~~ 476 (485)
+|++||++|++++.
T Consensus 411 fG~~Ag~~aa~~~~ 424 (588)
T 2wdq_A 411 FGRAAGLHLQESIA 424 (588)
T ss_dssp HHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999988764
No 7
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.93 E-value=3.4e-24 Score=231.65 Aligned_cols=356 Identities=15% Similarity=0.130 Sum_probs=205.3
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCC-c-ceeecCCCceeccCCCCcchHHHhhc-c----CCCCc
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL-S-KVKISGGGRCNVTNGHCADKMILAGH-Y----PRGHK 120 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g-~-k~~~sG~g~~n~tn~~~~~~~~~~~~-~----~~~~~ 120 (485)
+.++||||||||+||++||++|++ .|.+|+|||+.... . +..+.|+..+...+.....+..++.. . .....
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~--~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~ 93 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSE--AGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQ 93 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCH
T ss_pred cccCCEEEECccHHHHHHHHHHHH--CCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCH
Confidence 346899999999999999999999 68999999976543 2 23344444444443211122122111 1 01122
Q ss_pred cchhhHhhcCChHHHHHHHHhcCCceeecCCCeeee----------------------cCCChHHHHHHHHHHHHHCCCC
Q 011458 121 EFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFP----------------------VSDSSSSVIDCLLTEAKHRGVA 178 (485)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p----------------------~~~~a~~v~~~L~~~l~~~GV~ 178 (485)
.++..+ ... ..+.++|+.++|+++....+|.++. .+.....++..|.+.+.+.||
T Consensus 94 ~~v~~l-~~~-s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv- 170 (621)
T 2h88_A 94 DAIHYM-TEQ-APAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDT- 170 (621)
T ss_dssp HHHHHH-HHH-HHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHH-HHH-HHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCC-
Confidence 232222 121 3467889999999886554443331 111345788999999999999
Q ss_pred CccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC--------------CchhHHHHHHCCCceec
Q 011458 179 PSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVD 244 (485)
Q Consensus 179 ~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~~~g~~la~~~G~~i~~ 244 (485)
+|++++.|++|..++ +.+.+|.+.+..+++...+.|+.||+|||+ +|+|+.|+..+|+.+.+
T Consensus 171 ---~i~~~~~v~~Li~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa~l~~ 246 (621)
T 2h88_A 171 ---SYFVEYFALDLLMEN-GECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQD 246 (621)
T ss_dssp ---EEEETEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEEC
T ss_pred ---EEEEceEEEEEEEEC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCCCccc
Confidence 999999999998764 445566654211233357999999999995 46799999999999987
Q ss_pred CCCcee-EEEeCCcccccccCcccccEEEEEEecCccCCCCccceecCeEEeecccc----chhHhhccHHHHHHHHccC
Q 011458 245 PVPSLF-TFKIADSQLTELSGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLS----GPVILRLSAWGARYLFSSC 319 (485)
Q Consensus 245 ~~p~l~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~GiS----G~~il~lS~~~~~~~~~~~ 319 (485)
+....+ |........---.+++-.. .+-+ + ..|+-+..+|.-. .|- --+|+.+..++.+..
T Consensus 247 me~~q~hPt~~~~~~~l~se~~rg~g-~ilv--n----------~~G~RF~~~y~p~~~ela~r-dvv~rai~~e~~~g~ 312 (621)
T 2h88_A 247 LEFVQFHPTGIYGAGCLITEGCRGEG-GILI--N----------SQGERFMERYAPVAKDLASR-DVVSRSMTIEIREGR 312 (621)
T ss_dssp TTCEEEEEEEETTTCCBCCTHHHHTT-CEEE--C----------TTCCCTHHHHSTTTGGGSCH-HHHHHHHHHHHHTTC
T ss_pred CcceeeecccccCCcceecccccCCc-cEEE--C----------CCCCCcccccCcccccccch-HHHHHHHHHHHHhcC
Confidence 653322 2222111000000111111 1112 2 1233322222100 010 012232333333322
Q ss_pred c----eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHh-cCCCCCCccccCCHHHHHHH
Q 011458 320 Y----KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGR-EGLSGDTLWASVSNNSLISI 394 (485)
Q Consensus 320 ~----~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~l 394 (485)
. ...+.+|+ ..+..+.+.+.+. . +..+++. .|+|+.
T Consensus 313 g~~~~~~~v~ld~-~~l~~~~l~~~~~-----------------------~-i~~~~~~~~G~D~~-------------- 353 (621)
T 2h88_A 313 GCGPEKDHVYLQL-HHLPPQQLATRLP-----------------------G-ISETAMIFAGVDVT-------------- 353 (621)
T ss_dssp CBTTTTCBEEEEC-TTSCHHHHHHHCH-----------------------H-HHHHHHHHHCCCTT--------------
T ss_pred CcccCCCeEEEEc-ccCCHHHHHHHHH-----------------------H-HHHHHHHhcCCCCC--------------
Confidence 1 11244553 2334443322111 1 1122222 377653
Q ss_pred HHHhccCeEEEcccCCCceeEEeeCCcCCCCCCcccc-----cccCCCCeEEEEeee--eccc--CcchHHHHHHHHHHH
Q 011458 395 ARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTM-----ESKIHPRLFFAGEVL--NVDG--VTGGFNFQNAWSGGY 465 (485)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~-----esk~~~gLy~~GE~l--Dv~g--~~GGynl~~A~~sG~ 465 (485)
+-|+++... +..|+|||.+|+-. +.+ ..+.|||||+|||+. .++| +.||.+|..|+++|+
T Consensus 354 -----~~pi~v~p~-----~h~tmGGi~~d~~~-~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr 422 (621)
T 2h88_A 354 -----KEPIPVLPT-----VHYNMGGIPTNYKG-QVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGR 422 (621)
T ss_dssp -----TSCEEEEEE-----EEEESCBEEBCTTS-EEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHH
T ss_pred -----CCCEEEEee-----cccccCcEeECCCC-eEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHH
Confidence 234555433 67899999998532 222 247899999999976 5777 679999999999999
Q ss_pred HHHHHHhHHhh
Q 011458 466 IAGTSIGKLSN 476 (485)
Q Consensus 466 ~AG~~a~~~~~ 476 (485)
+||++|++++.
T Consensus 423 ~Ag~~aa~~~~ 433 (621)
T 2h88_A 423 ACALTIAETCK 433 (621)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhhh
Confidence 99999998764
No 8
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.93 E-value=4.2e-24 Score=232.42 Aligned_cols=349 Identities=16% Similarity=0.125 Sum_probs=203.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCC--CcceeecCCCceeccCCC---CcchHHHhhc-c--C--CC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKP--LSKVKISGGGRCNVTNGH---CADKMILAGH-Y--P--RG 118 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~--g~k~~~sG~g~~n~tn~~---~~~~~~~~~~-~--~--~~ 118 (485)
.++||||||||++|++||++|++ .|.+|+|||+... +.+..++|+..+...+.. ..++..++.. . . ..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae--~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~ 81 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQ--KGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGC 81 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCS
T ss_pred ccccEEEECchHHHHHHHHHHHH--CCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCC
Confidence 35899999999999999999999 6899999998754 345556666666555421 1111111111 0 0 11
Q ss_pred CccchhhHhhcCChHHHHHHHHhcCCceeecCCCe---------------------ee---------ec-----CCChHH
Q 011458 119 HKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGR---------------------VF---------PV-----SDSSSS 163 (485)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~---------------------~~---------p~-----~~~a~~ 163 (485)
.......+ .. ...+.++|+..+|+++....+|. ++ |. +.....
T Consensus 82 d~~~v~~~-~~-~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~ 159 (660)
T 2bs2_A 82 DQKVARMF-VN-TAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHT 159 (660)
T ss_dssp CHHHHHHH-HH-HHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHH
T ss_pred CHHHHHHH-HH-HHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHH
Confidence 22222222 12 13467789999998876443332 11 11 122567
Q ss_pred HHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC--------------Cc
Q 011458 164 VIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQ 229 (485)
Q Consensus 164 v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~~ 229 (485)
++..|.+.+.+.|| +|++++.|++|..++ +.+.+|.+.+..++....+.||.||+|||+ +|
T Consensus 160 l~~~L~~~a~~~gv----~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~tt~~~~~tG 234 (660)
T 2bs2_A 160 MLFAVANECLKLGV----SIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEG 234 (660)
T ss_dssp HHHHHHHHHHHHTC----EEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCGGGSSSBSSCTTCSC
T ss_pred HHHHHHHHHHhCCC----EEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcchhhcCCCCCCCCccc
Confidence 89999999999999 999999999998764 445566553211223346999999999996 36
Q ss_pred hhHHHHHHCCC-ceecCCCceeEEEeCCccc-cccc--CcccccEEEEEEecCccCCCCccceecCeEEeeccc----cc
Q 011458 230 QGHRLAAQLGH-SIVDPVPSLFTFKIADSQL-TELS--GVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGL----SG 301 (485)
Q Consensus 230 ~g~~la~~~G~-~i~~~~p~l~~~~~~~~~~-~~l~--G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~Gi----SG 301 (485)
+|+.++...|+ ++..+. ++++....... ..+. +++-.. .+-+ + ..|+-+..+|.- -.
T Consensus 235 dG~~mA~~aGa~~l~~me--~~q~hPt~~~~~~~l~se~~rg~g-~ilv--n----------~~G~RF~~~y~p~~~ela 299 (660)
T 2bs2_A 235 TGTAIALETGIAQLGNME--AVQFHPTPLFPSGILLTEGCRGDG-GILR--D----------VDGHRFMPDYEPEKKELA 299 (660)
T ss_dssp HHHHHHHTTSSSCEECTT--CEEEESCBBTTTCCBCCTHHHHHT-CEEE--C----------TTCCBCHHHHCTTTGGGS
T ss_pred HHHHHHHHcCCChhcCch--hheecccccCCCcceecccccCCC-cEEE--C----------CCCCCcCcccCccccccc
Confidence 79999999999 987654 33333211000 0010 001000 1111 2 123332222210 01
Q ss_pred hhHhhccHHHHHHHHccCc-----eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHh-c
Q 011458 302 PVILRLSAWGARYLFSSCY-----KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGR-E 375 (485)
Q Consensus 302 ~~il~lS~~~~~~~~~~~~-----~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~-~ 375 (485)
|- --+|+.+..++.+... ...+.+|+- .+..+.+. . .+| .+..+++. .
T Consensus 300 ~r-dvv~rai~~~~~~g~g~~~~~~~~v~ld~~-~~~~~~~~----------------~------~~p--~i~e~~~~~~ 353 (660)
T 2bs2_A 300 SR-DVVSRRMIEHIRKGKGVQSPYGQHLWLDIS-ILGRKHIE----------------T------NLR--DVQEICEYFA 353 (660)
T ss_dssp CH-HHHHHHHHHHHHTTTSBCCTTCCBEEEECG-GGCHHHHH----------------H------HSH--HHHHHHHHTS
T ss_pred ch-HHHHHHHHHHHHhcCCccCCCCCEEEEECC-CCCHHHHH----------------H------HhH--HHHHHHHHhc
Confidence 10 0112223333322211 123445542 11222111 1 111 13455555 5
Q ss_pred CCCCCCccccCCHHHHHHHHHHhccCeEEEcccCCCceeEEeeCCcCCCCCCcccccccCCCCeEEEEeee--eccc--C
Q 011458 376 GLSGDTLWASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVL--NVDG--V 451 (485)
Q Consensus 376 ~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~gLy~~GE~l--Dv~g--~ 451 (485)
|+++.+ .|+++.. .+..|+|||.+|+- .+. .|||||+|||+. .++| +
T Consensus 354 GiD~~~-------------------~~ipv~p-----~~hyt~GGi~vd~~----~~v-~IpGLYAaGE~a~~g~hGanr 404 (660)
T 2bs2_A 354 GIDPAE-------------------KWAPVLP-----MQHYSMGGIRTDYR----GEA-KLKGLFSAGEAACWDMHGFNR 404 (660)
T ss_dssp CCCTTT-------------------SCEEECC-----EEEEECCEEECCTT----SBC-SSBTEEECGGGEECCSSTTCC
T ss_pred CCCCcc-------------------cceEeee-----eeeeccceEEECCC----Cce-ecCCEEeccccccccccCCCC
Confidence 887742 3555543 37789999998743 233 899999999975 5776 6
Q ss_pred cchHHHHHHHHHHHHHHHHHhHHhh
Q 011458 452 TGGFNFQNAWSGGYIAGTSIGKLSN 476 (485)
Q Consensus 452 ~GGynl~~A~~sG~~AG~~a~~~~~ 476 (485)
.||.+|..|+++|++||++|++++.
T Consensus 405 lggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 405 LGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhh
Confidence 7999999999999999999998874
No 9
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.92 E-value=1.2e-24 Score=234.03 Aligned_cols=373 Identities=20% Similarity=0.240 Sum_probs=209.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCC-------cchHHHhhcc-----
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHC-------ADKMILAGHY----- 115 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~-------~~~~~~~~~~----- 115 (485)
..+||+|||+|++|+++|+.|++ .|.+|+|||+. .+++....++++.+ ..+... ..+..+...+
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~--~g~~v~~~e~~~~~~~~~~~a~gg~~-~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 201 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARD--AGAKVILLEKEPIPGGNTKLAAGGMN-AAETKPQAKLGIEDKKQIMIDDTMKGGR 201 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHS--SSCCEEEECSSSSSCTTGGGCCSCEE-CCSSSTTGGGTCCCCTHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEecCCCCCcchhhhCCeeE-ccCCHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 46799999999999999999999 68999999965 56666666666554 222111 0111222111
Q ss_pred CCCCccchhhHhhcCChHHHHHHHHhcCCceee--cCCCeeeecC-------CChHHHHHHHHHHHHHCCCCCccEEEeC
Q 011458 116 PRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKT--EDDGRVFPVS-------DSSSSVIDCLLTEAKHRGVAPSVVLQTG 186 (485)
Q Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~--~~~g~~~p~~-------~~a~~v~~~L~~~l~~~GV~~~~~i~~~ 186 (485)
....+.++..+ .. ...+.++|+...|+++.. ...+..+|.. .....++..|.+.+++.|| +|+++
T Consensus 202 ~~~~~~~v~~~-~~-~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv----~i~~~ 275 (572)
T 1d4d_A 202 NINDPELVKVL-AN-NSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGT----DIRLN 275 (572)
T ss_dssp TCSCHHHHHHH-HH-THHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC----EEESS
T ss_pred CCCCHHHHHHH-HH-ccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCC----eEEec
Confidence 11122232222 11 345778999999988742 1234333321 1256789999999999999 99999
Q ss_pred ceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC--------------------------CchhHHHHHHCCC
Q 011458 187 KVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------------------SQQGHRLAAQLGH 240 (485)
Q Consensus 187 ~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------------------~~~g~~la~~~G~ 240 (485)
++|++|..++++..++|.+.+ .+++...+.||.||+|||+ +++|+.++.++|+
T Consensus 276 t~v~~l~~~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~p~~~~~~~~~~~~~tGdgi~~a~~~Ga 354 (572)
T 1d4d_A 276 SRVVRILEDASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDVALQAGA 354 (572)
T ss_dssp EEEEEEEEC--CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBSSCTTCSSHHHHHHHHTTB
T ss_pred CEEEEEEECCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccCHHHHHHhCccccCCCccCCCCCccHHHHHHHHcCC
Confidence 999999865312455666542 1222347999999999995 2467899999999
Q ss_pred ceecCCCce-eEEEeCCcccccccC--cccccEEEEEEecCccCCCCccceecCeEEeeccccchhHhhccHHHHHHHHc
Q 011458 241 SIVDPVPSL-FTFKIADSQLTELSG--VSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFS 317 (485)
Q Consensus 241 ~i~~~~p~l-~~~~~~~~~~~~l~G--~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~GiSG~~il~lS~~~~~~~~~ 317 (485)
.+..+.... .|...... ..+.. ++... .+-+..+| +++.. |+ ..+...+.+++. .
T Consensus 355 ~~~~~~~~q~~p~~~~~~--~~l~~~~~~~~g-~i~vn~~G----~RF~~---E~--~~~~~~~~ai~~----------~ 412 (572)
T 1d4d_A 355 ATRDLQYIQAHPTYSPAG--GVMITEAVRGNG-AIVVNREG----NRFMN---EI--TTRDKASAAILQ----------Q 412 (572)
T ss_dssp CEECTTCEEEEEEEETTT--TEECCHHHHHTT-CEEECTTS----CCCSC---TT--SCHHHHHHHHHT----------S
T ss_pred eEeCCCceeEecccCCCc--cccchhhhccCc-eEEECCCC----CCccC---CC--CCHhHHHHHHHh----------C
Confidence 988766543 23211111 11111 01111 12122222 22221 22 112211222221 1
Q ss_pred cCceeEEEEec--CCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHH
Q 011458 318 SCYKGMLTVDF--VPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIA 395 (485)
Q Consensus 318 ~~~~~~i~id~--~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~ 395 (485)
.+....+.+|- .... ..+... +..-. ......+++|+++.+++++...+.+ ++++..+
T Consensus 413 ~~~~~~~i~d~~~~~~~--~~~~~~------------~~~~~----~~~~~ti~ela~~~gi~~~~l~~tv--~~yn~~~ 472 (572)
T 1d4d_A 413 KGESAYLVFDDSIRKSL--KAIEGY------------VHLNI----VKEGKTIEELAKQIDVPAAELAKTV--TAYNGFV 472 (572)
T ss_dssp GGGCEEEEECHHHHTTC--THHHHH------------HHTTC----CEEESSHHHHHHHHTCCHHHHHHHH--HHHHHHC
T ss_pred cCCeEEEEEChHHhhhc--cchHHH------------hhCCc----EEEeCCHHHHHHHcCCCHHHHHHHH--HHHHHHH
Confidence 11123333331 1110 001000 00000 1112235566666677654333222 2344443
Q ss_pred HH--------------hccCeEEEcccCCCceeEEeeCCcCCCCCCcccc--cc-cCCCCeEEEEeee-eccc--CcchH
Q 011458 396 RL--------------LKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTM--ES-KIHPRLFFAGEVL-NVDG--VTGGF 455 (485)
Q Consensus 396 ~~--------------l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~--es-k~~~gLy~~GE~l-Dv~g--~~GGy 455 (485)
.. +.+-||+..... ..+..|+|||.+|+-- +.+ +. +.|||||+|||+. .++| +.||.
T Consensus 473 ~~g~D~~fg~~~~~~~i~~~Pfya~~v~--p~~~~t~GGl~id~~~-~Vl~~~g~~~I~GLyAaGe~~~g~~g~~~l~g~ 549 (572)
T 1d4d_A 473 KSGKDAQFERPDLPRELVVAPFYALEIA--PAVHHTMGGLVIDTKA-EVKSEKTAKPITGLYAAGEVTGGVHGANRLGGN 549 (572)
T ss_dssp -CCCCTTTCCSCCCCCCCSSSEEEEEEE--EEEEEECCEEEBCTTC-EEEBSSSSSEEEEEEECSTTEESTTTTSCCTTH
T ss_pred hcCCCcccCCCCCCCcCCCCCEEEEEEE--cccceeCCCeEECCCC-eEEcCCCCcccCCeeECeecccCCCCCCCCchH
Confidence 21 234465543332 3377899999998632 222 24 7899999999976 4665 67999
Q ss_pred HHHHHHHHHHHHHHHHhHHhh
Q 011458 456 NFQNAWSGGYIAGTSIGKLSN 476 (485)
Q Consensus 456 nl~~A~~sG~~AG~~a~~~~~ 476 (485)
+|.+|+++||+||++|+++++
T Consensus 550 sl~~~~vfGr~Ag~~aa~~~~ 570 (572)
T 1d4d_A 550 AISDIVTYGRIAGASAAKFAK 570 (572)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999998764
No 10
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.92 E-value=5.9e-24 Score=225.79 Aligned_cols=370 Identities=18% Similarity=0.175 Sum_probs=205.2
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCC------C-CcchHHHhhcc----
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNG------H-CADKMILAGHY---- 115 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~------~-~~~~~~~~~~~---- 115 (485)
+.++||||||+|++|++||+.|++ .|++|+||||. ..|+....++++-+.-... . ..+.+.+...+
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~--~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~ 116 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAAR--AGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAAL 116 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHh
Confidence 456899999999999999999999 68999999976 4565544444432100000 0 01111222111
Q ss_pred -CCCCccchhhHhhcCChHHHHHHHHhcCCceeec-----------CCCeeeec--------------------------
Q 011458 116 -PRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTE-----------DDGRVFPV-------------------------- 157 (485)
Q Consensus 116 -~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~-----------~~g~~~p~-------------------------- 157 (485)
..........+. ....+.++|+.+.|+++... ..+..+..
T Consensus 117 ~~~~~~~~~~~~~--~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~ 194 (510)
T 4at0_A 117 GPGADEEKITDYC--EGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKR 194 (510)
T ss_dssp CSSCCHHHHHHHH--HTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCB
T ss_pred CCCCCHHHHHHHH--HhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccc
Confidence 111222222221 13456788999999876532 11122110
Q ss_pred --CCCh-HHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcC-eEEEecCC------
Q 011458 158 --SDSS-SSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEAD-YLLIASGS------ 227 (485)
Q Consensus 158 --~~~a-~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad-~VIlAtG~------ 227 (485)
.... ..+...|.+.+++.|+ +|+++++|++|..++++...+|.+.+ .++...+.|+ .||+|||+
T Consensus 195 ~g~~~g~~~l~~~L~~~~~~~Gv----~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~~n~~ 268 (510)
T 4at0_A 195 TGEKGGGYMLMKPLVETAEKLGV----RAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFAYNDK 268 (510)
T ss_dssp TTTBCTTHHHHHHHHHHHHHTTC----EEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCTTCHH
T ss_pred cccCCCHHHHHHHHHHHHHHcCC----EEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChhhCHH
Confidence 0112 2789999999999999 99999999999987314556676653 2333579995 99999995
Q ss_pred --------------------CchhHHHHHHCCCceecCCCcee-EEEeCCcccccccCcccccEEEEEEecCccCCCCcc
Q 011458 228 --------------------SQQGHRLAAQLGHSIVDPVPSLF-TFKIADSQLTELSGVSFPKVVAKLKLENVQRSSPYL 286 (485)
Q Consensus 228 --------------------~~~g~~la~~~G~~i~~~~p~l~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 286 (485)
+|+|+.++..+|..+..+..... |+ . .+ ..+.+ .+-+..+| +++.
T Consensus 269 m~~~~~p~~~~~~~~~~~~~tGdGi~ma~~~Ga~~~~m~~~~~~p~-~-~~--~~~~~------~i~vn~~G----~RF~ 334 (510)
T 4at0_A 269 MIEAHAPRLIGRPGAAIEEHDGRSILMAQALGADLAHMDATEVAFV-C-DP--QLIVR------GILVNGRG----QRYV 334 (510)
T ss_dssp HHHHHCGGGTTCBCCSCTTCCCHHHHHHHTTTBCEECTTCEEEEEC-S-CH--HHHTT------SEEECTTS----CBCS
T ss_pred HHHHhCccccCCCCCCCCCCCHHHHHHHHHhCcCeecchhhhccCc-c-Ch--hhccc------cEEECCCC----CCCC
Confidence 34678899999988876655431 11 0 11 01111 11121122 2222
Q ss_pred ceecCeEEeeccccchhHhhccHHHHHHHHcc-CceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhH
Q 011458 287 TQVGPMLVTHWGLSGPVILRLSAWGARYLFSS-CYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVK 365 (485)
Q Consensus 287 ~~~Ge~lft~~GiSG~~il~lS~~~~~~~~~~-~~~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 365 (485)
.+ .. + .. .+.+.+... +....+.+|- ..++. . ...........+... .+ .
T Consensus 335 nE---~~---~----~~------~~~~~~~~~~~~~~~~i~D~------~~~~~-~---~~~~~~~~~~~~~~~--~~-a 385 (510)
T 4at0_A 335 PE---DT---Y----SG------RIGQMTLFHQDNQAFLIIDE------ASYEE-G---AAATTATPFLRVQPK--WA-A 385 (510)
T ss_dssp CT---TS---C----HH------HHHHCCCCCSTTCCEEEEEH------HHHHH-H---HHSCCSCGGGCCCCS--EE-E
T ss_pred CC---Cc---c----HH------HHHHHHHhCCCCeEEEEECH------HHHHh-h---hcccccccchhhhhc--cc-C
Confidence 22 10 0 00 011111111 1122333331 11111 0 000000000011111 11 2
Q ss_pred HHHHHHHHhcCCCCCCccccCCHHHHHHHHHH---------------hccCeEEEcccCCCceeEEeeCCcCCCCCCc-c
Q 011458 366 RFWKYILGREGLSGDTLWASVSNNSLISIARL---------------LKHCTLEVAGKGQFKDEFVTAGGVPLSEISL-N 429 (485)
Q Consensus 366 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~---------------l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~-~ 429 (485)
..+++|+++++++++...+.+ +++|+++.. +. -||+..... ......|+||+.+|+--. -
T Consensus 386 dtleeLA~~~g~~~~~l~~tv--~~yN~~~~~g~D~~fgk~~~~l~pi~-~Pfya~~~~-~~~~~~t~GGl~~d~~~~Vl 461 (510)
T 4at0_A 386 ETVEELESDMGLPAGALQSTV--EVYNKHAAEGSDPLLHKKSEWVKPIG-TPVAALDLR-GFTLGFTLGGLRTTVNSEVL 461 (510)
T ss_dssp SSHHHHHHHTTCCTTHHHHHH--HHHHHHHTTTCCTTTCCCGGGCCCCC-SSEEEEECT-TCEEEEECCEECBCTTCEEE
T ss_pred CCHHHHHHHhCcCHHHHHHHH--HHHHHHHhcCCCcccCCCcccccCCC-CCEEEEEee-cCcccccCcCeeECCCCceE
Confidence 346677777777776544433 355555532 22 355554432 123678999999986321 1
Q ss_pred cccccCCCCeEEEEeee-eccc--CcchHHHHHHHHHHHHHHHHHhHH
Q 011458 430 TMESKIHPRLFFAGEVL-NVDG--VTGGFNFQNAWSGGYIAGTSIGKL 474 (485)
Q Consensus 430 t~esk~~~gLy~~GE~l-Dv~g--~~GGynl~~A~~sG~~AG~~a~~~ 474 (485)
+-+.+.|||||+|||+. .++| +.||.+|..|+++||+||++|+++
T Consensus 462 ~~~g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~~ 509 (510)
T 4at0_A 462 HVSGEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAKQ 509 (510)
T ss_dssp BTTSSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHhc
Confidence 22468999999999976 5654 679999999999999999999864
No 11
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.92 E-value=4.5e-24 Score=227.92 Aligned_cols=351 Identities=15% Similarity=0.134 Sum_probs=189.3
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCC-CcceeecCCCceeccCCCCcchHHHhhcc-----CCCCccc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKP-LSKVKISGGGRCNVTNGHCADKMILAGHY-----PRGHKEF 122 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~-g~k~~~sG~g~~n~tn~~~~~~~~~~~~~-----~~~~~~~ 122 (485)
.++||+|||||++|++||++|++ |.+|+||||... +.....+++|.+...+.. .++..+...+ ...+...
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~-ds~~~~~~d~l~~g~g~~d~~~ 82 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGPVTEGSTFYAQGGIAAVFDET-DSIDSHVEDTLIAGAGICDRHA 82 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSCTTC-------------CCSH-HHHHHHHHHHHHHTTTCCCHHH
T ss_pred CCCCEEEECccHHHHHHHHHHhc---CCcEEEEECCCCCCCChhhcCCCEEEecCCC-CCHHHHHHHHHHhhcccCCHHH
Confidence 46899999999999999999997 689999997644 334444444444322211 1111111111 0112222
Q ss_pred hhhHhhcCChHHHHHHHHhcCCceeecC----CCee-------------ee-cCCChHHHHHHHHHHHHH-CCCCCccEE
Q 011458 123 RGSFFSLHGPMDTMSWFSDHGVELKTED----DGRV-------------FP-VSDSSSSVIDCLLTEAKH-RGVAPSVVL 183 (485)
Q Consensus 123 ~~~~l~~~~~~~~~~~~~~~Gi~~~~~~----~g~~-------------~p-~~~~a~~v~~~L~~~l~~-~GV~~~~~i 183 (485)
+..+ .. ...+.++|+.++|+++.... ++.+ ++ .+.....+...|.+.+++ .|| +|
T Consensus 83 v~~~-~~-~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv----~i 156 (540)
T 1chu_A 83 VEFV-AS-NARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNI----RV 156 (540)
T ss_dssp HHHH-HH-HHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTE----EE
T ss_pred HHHH-HH-hHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCC----EE
Confidence 2221 11 13467889999999876433 2311 11 112345677788888888 799 99
Q ss_pred EeCceEEEEEE-cCCC------CeEEEEEeeecCCceEEEEcCeEEEecCC--------------CchhHHHHHHCCCce
Q 011458 184 QTGKVVTTASS-DNAG------RKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSI 242 (485)
Q Consensus 184 ~~~~~V~~i~~-~~~~------~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~~~g~~la~~~G~~i 242 (485)
++++.|++|.. ++ + .+++|.+.+..+++...+.||.||+|||+ +|+|+.|+..+|+.+
T Consensus 157 ~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdG~~ma~~aGa~l 235 (540)
T 1chu_A 157 LERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRV 235 (540)
T ss_dssp ECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCCE
T ss_pred EeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccccCCCcCCCCCchHHHHHHHHcCCCC
Confidence 99999999987 43 3 34566664211222347999999999995 467899999999999
Q ss_pred ecCCCc-eeEEEeCCccc-cccc--CcccccEEEEEEecCccCCCCccceecCeEEeeccccchhHhhccHHHHHHHHcc
Q 011458 243 VDPVPS-LFTFKIADSQL-TELS--GVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWGLSGPVILRLSAWGARYLFSS 318 (485)
Q Consensus 243 ~~~~p~-l~~~~~~~~~~-~~l~--G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~GiSG~~il~lS~~~~~~~~~~ 318 (485)
.++... +.|..+..+.. ..|- .++-.. .+-+..+| +++..+. ..++-..|- -.+++.+..++.+.
T Consensus 236 ~~~e~~q~hpt~~~~~~~~~~l~~e~~rg~g-~~lvn~~G----~RF~~~~-----~~~~el~~r-d~v~~ai~~~~~~~ 304 (540)
T 1chu_A 236 ANLEFNQFHPTALYHPQARNFLLTEALRGEG-AYLKRPDG----TRFMPDF-----DERGELAPR-DIVARAIDHEMKRL 304 (540)
T ss_dssp ECTTCEEEEEEEECSTTCTTCBCCHHHHHTT-CEEECTTS----CBCGGGT-----CTTGGGSCH-HHHHHHHHHHHHHH
T ss_pred cChHHHhhcCeeecCCCCCcceeehhhcCCc-eEEECCCC----CCCcccC-----CcccccCcH-HHHHHHHHHHHHhc
Confidence 877543 23333221100 0010 011111 11121111 1222110 111222221 12233333333222
Q ss_pred CceeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHh
Q 011458 319 CYKGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLL 398 (485)
Q Consensus 319 ~~~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l 398 (485)
+ ...+.+|+-+ +..+.+ .. .+| .+..+++..|+|+.+
T Consensus 305 ~-~~~v~ld~~~-~~~~~~----~~------------------~~~--~i~~~~~~~Gid~~~----------------- 341 (540)
T 1chu_A 305 G-ADCMFLDISH-KPADFI----RQ------------------HFP--MIYEKLLGLGIDLTQ----------------- 341 (540)
T ss_dssp T-CSCEEEECCS-SCSHHH----HH------------------HCH--HHHHHHHTTTCCTTT-----------------
T ss_pred C-CceEEEeccc-CCHHHH----HH------------------hhh--hHHHHHHHhCcCCCC-----------------
Confidence 2 1234556432 122211 10 111 245667778998753
Q ss_pred ccCeEEEcccCCCceeEEeeCCcCCCCCCcccccccCCCCeEEEEeee--eccc--CcchHHHHHHHHHHHHHHHHHhHH
Q 011458 399 KHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVL--NVDG--VTGGFNFQNAWSGGYIAGTSIGKL 474 (485)
Q Consensus 399 ~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~gLy~~GE~l--Dv~g--~~GGynl~~A~~sG~~AG~~a~~~ 474 (485)
-|+++... +..|+|||.+|+-. + +.|||||+|||+. .++| +.||.+|.+|+++|++||++|+++
T Consensus 342 --~~i~v~p~-----~h~t~GGi~vd~~~----~-t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 342 --EPVPIVPA-----AHYTCGGVMVDDHG----R-TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp --SCEEEEEE-----EEEESCEEECCTTC----B-CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCeEeehH-----HheecCcEEECCCC----C-CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHh
Confidence 14555433 78899999998544 2 6899999999987 5666 779999999999999999999877
Q ss_pred hh
Q 011458 475 SN 476 (485)
Q Consensus 475 ~~ 476 (485)
+.
T Consensus 410 ~~ 411 (540)
T 1chu_A 410 MP 411 (540)
T ss_dssp C-
T ss_pred cc
Confidence 53
No 12
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.90 E-value=4.3e-22 Score=215.07 Aligned_cols=346 Identities=17% Similarity=0.157 Sum_probs=194.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCC--CcEEEEeCCCCC--cceeecCCCceeccCCCCcchHHHh-hcc----CCCCc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPK--LNVVIIEKGKPL--SKVKISGGGRCNVTNGHCADKMILA-GHY----PRGHK 120 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g--~~V~llE~~~~g--~k~~~sG~g~~n~tn~~~~~~~~~~-~~~----~~~~~ 120 (485)
++||||||||++|++||+.|++ .| .+|+|||+.... .+..++|+..+.+.+.. .+.... +.+ .....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~--~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~d--s~~~~~~d~~~~g~~~~d~ 80 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQ--ANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHD--SFEYHFHDTVAGGDWLCEQ 80 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--HCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTC--CHHHHHHHHHHHTTTCSCH
T ss_pred cCCEEEECCCHHHHHHHHHHHh--cCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCC--CHHHHHHHHHHhcCCCCCH
Confidence 5899999999999999999999 46 999999976432 23333333222222211 111111 111 00112
Q ss_pred cchhhHhhcCChHHHHHHHHhcCCceeecCCCeeeec--------------CCChHHHHHHHHHHHHHCC-CCCccEEEe
Q 011458 121 EFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPV--------------SDSSSSVIDCLLTEAKHRG-VAPSVVLQT 185 (485)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~--------------~~~a~~v~~~L~~~l~~~G-V~~~~~i~~ 185 (485)
..+..+. . ...+.++|+..+|+++.....|.+++. +.....++..|.+.+.+.| | +|++
T Consensus 81 ~~v~~~~-~-~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv----~i~~ 154 (602)
T 1kf6_A 81 DVVDYFV-H-HCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQI----QRFD 154 (602)
T ss_dssp HHHHHHH-H-HHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTE----EEEE
T ss_pred HHHHHHH-H-HHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCc----EEEe
Confidence 2222211 1 124677889999998876544443321 1124678899999998888 9 9999
Q ss_pred CceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC--------------CchhHHHHHHCCCceecCCCceeE
Q 011458 186 GKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVDPVPSLFT 251 (485)
Q Consensus 186 ~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~~~g~~la~~~G~~i~~~~p~l~~ 251 (485)
++.|++|..++ +.+.+|...+..++....+.|+.||+|||+ +++|+.++...|.++..+. .++
T Consensus 155 ~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~~~~~~tGdgi~~a~~aGa~~~~~e--~~q 231 (602)
T 1kf6_A 155 EHFVLDILVDD-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDME--FVQ 231 (602)
T ss_dssp TEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEESTT--CEE
T ss_pred CCEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcCCCCCcccHHHHHHHHcCCCccChh--Hhh
Confidence 99999998775 444555443211222347999999999995 4678999999999987654 333
Q ss_pred EEeCCcccc-cc--cCcccccEEEEEEecCccCCCCccceecCeEEeecc-----cc-ch--hHhhc------cHHHHHH
Q 011458 252 FKIADSQLT-EL--SGVSFPKVVAKLKLENVQRSSPYLTQVGPMLVTHWG-----LS-GP--VILRL------SAWGARY 314 (485)
Q Consensus 252 ~~~~~~~~~-~l--~G~~~~~~~~~~~~~~~~~~~~~~~~~Ge~lft~~G-----iS-G~--~il~l------S~~~~~~ 314 (485)
+........ .+ .+++-.. .+-+..+| +++.. .|. .. .| ..+++ ++.+..+
T Consensus 232 fhPt~~~~~~~l~~e~~rg~g-~~lvn~~G----~RF~~--------~y~~~~~~~~~~p~~~~~el~~rd~v~~ai~~~ 298 (602)
T 1kf6_A 232 YHPTGLPGSGILMTEGCRGEG-GILVNKNG----YRYLQ--------DYGMGPETPLGEPKNKYMELGPRDKVSQAFWHE 298 (602)
T ss_dssp EEEEECTTTCCBCCTHHHHTT-CEEECTTC----CCGGG--------GTTTCSCCCSSCCCTTSGGGSCHHHHHHHHHHH
T ss_pred ccccccCCCcceechhhcCCc-eEEECCCC----CCccc--------cccccccccccCCcccccccccHHHHHHHHHHH
Confidence 322111100 00 0011111 11121121 22221 121 00 01 00111 2222233
Q ss_pred HHccCc-----eeEEEEecCCCCCHHHHHHHHHHHHHhchhhhhhhhCCCccchhHHHHHHHHHh-cCCCCCCccccCCH
Q 011458 315 LFSSCY-----KGMLTVDFVPDLHIEDMQSILSQHKIRFAKQKVLNSCPPEFCLVKRFWKYILGR-EGLSGDTLWASVSN 388 (485)
Q Consensus 315 ~~~~~~-----~~~i~id~~P~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~-~~~~~~~~~~~l~~ 388 (485)
+.+... ...+.+|+. .+..+.+.+. +| . +..+++. .|+|+.+
T Consensus 299 ~~~g~g~~~~~~~~v~ld~~-~~~~~~l~~~----------------------~~-~-~~~~~~~~~G~D~~~------- 346 (602)
T 1kf6_A 299 WRKGNTISTPRGDVVYLDLR-HLGEKKLHER----------------------LP-F-ICELAKAYVGVDPVK------- 346 (602)
T ss_dssp HHHTCSBCCTTCCBEEEECG-GGCHHHHHHH----------------------CH-H-HHHHHHHHHCCCTTT-------
T ss_pred HHhcCCccCCCCcEEEeecc-cCCHHHHHHH----------------------HH-H-HHHHHHHhcCCCCCc-------
Confidence 333221 123445532 1222222111 11 0 2233333 4777632
Q ss_pred HHHHHHHHHhccCeEEEcccCCCceeEEeeCCcCCCCCCcccccccCCCCeEEEEeee--eccc--CcchHHHHHHHHHH
Q 011458 389 NSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLSEISLNTMESKIHPRLFFAGEVL--NVDG--VTGGFNFQNAWSGG 464 (485)
Q Consensus 389 ~~~~~l~~~l~~~~~~~~~~~~~~~a~vt~GGv~~~ei~~~t~esk~~~gLy~~GE~l--Dv~g--~~GGynl~~A~~sG 464 (485)
-|+++.. .+..|+|||.+|+- ++. .|||||+|||+. .++| +.||.+|..|+++|
T Consensus 347 ------------~pi~v~p-----~~h~t~GGi~vd~~----~~~-~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfG 404 (602)
T 1kf6_A 347 ------------EPIPVRP-----TAHYTMGGIETDQN----CET-RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFG 404 (602)
T ss_dssp ------------SCEEEEE-----EEEEECCEEECCTT----SBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHH
T ss_pred ------------CceEEeh-----hheeeCCeEEECCC----Ccc-ccCCEEEccccccccccCCCCCccHHHHHHHHHH
Confidence 2445543 36789999998843 333 899999999987 5666 66999999999999
Q ss_pred HHHHHHHhHHh
Q 011458 465 YIAGTSIGKLS 475 (485)
Q Consensus 465 ~~AG~~a~~~~ 475 (485)
++||++|++++
T Consensus 405 r~Ag~~aa~~~ 415 (602)
T 1kf6_A 405 RLAGEQATERA 415 (602)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999999876
No 13
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.87 E-value=3.4e-21 Score=209.46 Aligned_cols=198 Identities=15% Similarity=0.141 Sum_probs=126.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhcc----CCCCcEEEEeCCCCCcceeecCC-CceeccCCCCcchHHHhhc-----cCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTV----APKLNVVIIEKGKPLSKVKISGG-GRCNVTNGHCADKMILAGH-----YPRG 118 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~----~~g~~V~llE~~~~g~k~~~sG~-g~~n~tn~~~~~~~~~~~~-----~~~~ 118 (485)
.++||||||||+||++||++|++. ++|.+|+||||..+++....+.+ ...|..... ..+..+... ....
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~-ds~e~~~~~~~~~~~gl~ 99 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGD-NNADDYVRMVRTDLMGLV 99 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTT-SCHHHHHHHHHHHTTTCC
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCC-CCHHHHHHHHHHhcCCCc
Confidence 368999999999999999999983 12899999998765543222222 022221111 122222211 1111
Q ss_pred CccchhhHhhcCChHHHHHHHHhcCCceeec-CCCeeee-------------------cC-----CChHHHHHHHHHHHH
Q 011458 119 HKEFRGSFFSLHGPMDTMSWFSDHGVELKTE-DDGRVFP-------------------VS-----DSSSSVIDCLLTEAK 173 (485)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~-~~g~~~p-------------------~~-----~~a~~v~~~L~~~l~ 173 (485)
.+..+..+ .. ...+.++|+..+|+++... .+|.+++ .. .....+...|.+.++
T Consensus 100 d~~~v~~l-~~-~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~ 177 (662)
T 3gyx_A 100 REDLIYDL-GR-HVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAK 177 (662)
T ss_dssp CHHHHHHH-HH-HHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHH
T ss_pred cHHHHHHH-HH-HHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHH
Confidence 22222211 11 2346678999999998765 4555442 10 113467788888888
Q ss_pred HC--CCCCccEEEeCceEEEEEEcCCC---CeEEEEEeeecCCceEEEEcCeEEEecCC---------------------
Q 011458 174 HR--GVAPSVVLQTGKVVTTASSDNAG---RKFLLKVEKRTMNLVECIEADYLLIASGS--------------------- 227 (485)
Q Consensus 174 ~~--GV~~~~~i~~~~~V~~i~~~~~~---~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------------- 227 (485)
+. || +|+.++.|++|..++ + .+.+|...+..++....+.|+.||+|||+
T Consensus 178 ~~~~gV----~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y~~~t~~~~~~~~~~~~ 252 (662)
T 3gyx_A 178 NALGQD----RIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNVYRPRSVGEGMGRAWYPV 252 (662)
T ss_dssp HHHCTT----TEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCT
T ss_pred hcCCCc----EEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccccccCcCCccccccccCCC
Confidence 87 99 999999999998876 4 45666553312334567999999999995
Q ss_pred --CchhHHHHHHCCCceecCCCceeEEEe
Q 011458 228 --SQQGHRLAAQLGHSIVDPVPSLFTFKI 254 (485)
Q Consensus 228 --~~~g~~la~~~G~~i~~~~p~l~~~~~ 254 (485)
+|+|+.|+..+|+.+..+.-.+.|..+
T Consensus 253 ~~tGdG~~mA~~aGA~l~~me~QfhPt~~ 281 (662)
T 3gyx_A 253 WNAGSTYTMCAQVGAEMTMMENRFVPARF 281 (662)
T ss_dssp TCBSHHHHHHHTTTCEEECTTCCBCCEEE
T ss_pred CCcchHHHHHHHhCCcccCCCeeEecccc
Confidence 246899999999999877644444433
No 14
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.86 E-value=4e-20 Score=201.33 Aligned_cols=201 Identities=15% Similarity=0.144 Sum_probs=127.9
Q ss_pred CCCCcEEEECcchHHHHHHHHHh---ccCCCCcEEEEeCCCCCcceeecCCC-cee--ccCCC----CcchHHHhhcc--
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAK---TVAPKLNVVIIEKGKPLSKVKISGGG-RCN--VTNGH----CADKMILAGHY-- 115 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la---~~~~g~~V~llE~~~~g~k~~~sG~g-~~n--~tn~~----~~~~~~~~~~~-- 115 (485)
+.++||||||||+||++||++|+ +. .|.+|+||||...++....++++ .++ +.... ...+..+....
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~-~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~ 98 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKL-GGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTL 98 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTT-TTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhh-CCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHH
Confidence 34689999999999999999999 31 47999999987655322222222 232 11000 11222222111
Q ss_pred ---CCCCccchhhHhhcCChHHHHHHHHhcCCceeecCCCeeeecCC-----ChHHHHHHHHHHHHHC-CCCCccEEEeC
Q 011458 116 ---PRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSD-----SSSSVIDCLLTEAKHR-GVAPSVVLQTG 186 (485)
Q Consensus 116 ---~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~-----~a~~v~~~L~~~l~~~-GV~~~~~i~~~ 186 (485)
....+.+...+.. ...+.++|+.++|+++....+|.++|... ....+...|.+.+++. ||. +|+++
T Consensus 99 ~g~~l~d~~~v~~~~~--~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~---~i~~~ 173 (643)
T 1jnr_A 99 DMMGLAREDLVADYAR--HVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEE---NIYER 173 (643)
T ss_dssp HTTTCCCHHHHHHHHH--HHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGG---GEECS
T ss_pred HhcCcCcHHHHHHHHH--HHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCc---EEEec
Confidence 1112223222211 13567889999999987666666665321 1345677788788776 650 49999
Q ss_pred ceEEEEEEcCCC---CeEEEEEeeecCCceEEEEcCeEEEecCC-----------------------CchhHHHHHHCCC
Q 011458 187 KVVTTASSDNAG---RKFLLKVEKRTMNLVECIEADYLLIASGS-----------------------SQQGHRLAAQLGH 240 (485)
Q Consensus 187 ~~V~~i~~~~~~---~~~~V~~~~~~~~~~~~i~ad~VIlAtG~-----------------------~~~g~~la~~~G~ 240 (485)
+.|++|..++ + .+.+|...+..++....+.|+.||+|||+ +|+|+.|+..+|+
T Consensus 174 ~~v~~L~~~~-~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~~~~~~~~~~~~~~~~~tGdG~~mA~~aGa 252 (643)
T 1jnr_A 174 VFIFELLKDN-NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGLKAGA 252 (643)
T ss_dssp EEEEEEEECT-TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBSHHHHHHHHHTC
T ss_pred CEEEEEEEcC-CccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccCcccccccccccCCCCCccHHHHHHHHhCC
Confidence 9999998875 4 45566543212233457999999999994 2468999999999
Q ss_pred ceecCCCceeEEEeC
Q 011458 241 SIVDPVPSLFTFKIA 255 (485)
Q Consensus 241 ~i~~~~p~l~~~~~~ 255 (485)
.+..+.+.++|..+.
T Consensus 253 ~l~~me~qf~pt~~~ 267 (643)
T 1jnr_A 253 MLTQFEHRFIPFRFK 267 (643)
T ss_dssp CEESTTCCBCCEEET
T ss_pred ccCCchheeeccccc
Confidence 999888777766554
No 15
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.84 E-value=1.3e-21 Score=209.85 Aligned_cols=80 Identities=21% Similarity=0.312 Sum_probs=69.2
Q ss_pred ccCCHHHHHHHHHHhccCeEEEcccCCCceeEEeeCCcCC--CCCCc----ccccccCCCCeEEEEeeeecccCcchHHH
Q 011458 384 ASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPL--SEISL----NTMESKIHPRLFFAGEVLNVDGVTGGFNF 457 (485)
Q Consensus 384 ~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~a~vt~GGv~~--~ei~~----~t~esk~~~gLy~~GE~lDv~g~~GGynl 457 (485)
.+|+.++..++...+ .++++|+++++|+.+ ++||| .|||+|.+||||||||++|++ |||
T Consensus 330 t~l~~~~q~~~~~~i----------~gle~a~~~~~G~~~~y~~i~p~~l~~tle~k~~~gLf~AGqi~g~~----Gy~- 394 (641)
T 3cp8_A 330 TSLPEDIQIAGLRSI----------PGLEEAKMIRPGYAIEYDFFHPWQIRSTMETRPVENLFFAGQINGTS----GYE- 394 (641)
T ss_dssp CCSCHHHHHHHHTTS----------TTCTTCCEEECCEEEEEEEECGGGBCTTSBBSSSBTEEECSGGGTBC----CHH-
T ss_pred ccccHHHHHHHHhcC----------cchhhceEecceeeecceEECHHHcCCcccccCcCCEEEEEeecCCc----cHH-
Confidence 456677777777654 689999999999999 89999 899999999999999999886 799
Q ss_pred HHHHHHHHHHHHHHhHHhhhhh
Q 011458 458 QNAWSGGYIAGTSIGKLSNDAT 479 (485)
Q Consensus 458 ~~A~~sG~~AG~~a~~~~~~~~ 479 (485)
|||++|++||.+|+.++++++
T Consensus 395 -eA~a~G~~AG~naa~~~~~~~ 415 (641)
T 3cp8_A 395 -EAAAQGLMAGINAVRKILGKE 415 (641)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999998876543
No 16
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.83 E-value=7.4e-20 Score=196.29 Aligned_cols=78 Identities=29% Similarity=0.516 Sum_probs=64.7
Q ss_pred ccCCHHHHHHHHHHhccCeEEEcccCCCceeEEeeCC-------cCCCCCCcccccccCCCCeEEEEeeeecccCcchHH
Q 011458 384 ASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGG-------VPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFN 456 (485)
Q Consensus 384 ~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~a~vt~GG-------v~~~ei~~~t~esk~~~gLy~~GE~lDv~g~~GGyn 456 (485)
.+|+.+...++...+ .++++|.++.+| |+..+++ .|||+|.+|||||||++ .|.+ ||+
T Consensus 336 t~lp~~~q~~~~~~i----------pGle~a~i~r~Gy~ieyd~i~p~~L~-~tle~k~~~gLf~AGqi---nGtt-GYe 400 (651)
T 3ces_A 336 TSLPFDVQMQIVRSM----------QGMENAKIVRPGYAIEYDFFDPRDLK-PTLESKFIQGLFFAGQI---NGTT-GYE 400 (651)
T ss_dssp CCSCHHHHHHHHHTS----------TTCTTCCEEECCEEEEEEEECGGGBC-TTSBBSSSBTEEECSGG---GTCC-CHH
T ss_pred CCCCHHHHHHHHhhC----------CCccceEEEeccceeccCccchhhcC-ccccccCCCCeEEEEEe---cCCc-ChH
Confidence 456666667777655 589999999999 7788888 69999999999999975 5554 799
Q ss_pred HHHHHHHHHHHHHHHhHHhhhh
Q 011458 457 FQNAWSGGYIAGTSIGKLSNDA 478 (485)
Q Consensus 457 l~~A~~sG~~AG~~a~~~~~~~ 478 (485)
|||++|.+||.+|+.+++++
T Consensus 401 --EAaaqGl~AG~nAa~~~~~~ 420 (651)
T 3ces_A 401 --EAAAQGLLAGLNAARLSADK 420 (651)
T ss_dssp --HHHHHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999887654
No 17
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.82 E-value=2.6e-18 Score=180.53 Aligned_cols=178 Identities=17% Similarity=0.255 Sum_probs=112.2
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcc-eeecCCCceeccCCCCcchHHHhhcc-----CCCCccchhh
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSK-VKISGGGRCNVTNGHCADKMILAGHY-----PRGHKEFRGS 125 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k-~~~sG~g~~n~tn~~~~~~~~~~~~~-----~~~~~~~~~~ 125 (485)
||+|||||++|++||++|++ .|.+|+|||+...++. ....|+..+.+. ... .+..++... ....+.....
T Consensus 1 DVvVIG~G~AGl~aA~~la~--~G~~V~viek~~~~g~s~~a~Ggi~~~~~-~~d-~~~~~~~d~l~~g~~~~d~~~v~~ 76 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR--AGKKVTLISKRIDGGSTPIAKGGVAASVG-SDD-SPELHAQDTIRVGDGLCDVKTVNY 76 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH--TTCCEEEECSSTTCSSGGGCCSCEECCCS-TTC-CHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCchHHHHhCCeEEeCC-CCC-CHHHHHHHHHHhcCCcCCHHHHHH
Confidence 79999999999999999998 6899999997643432 333333222222 121 111111110 0112222222
Q ss_pred HhhcCChHHHHHHHHhcCCceeec---CCCeeee-----cCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCC
Q 011458 126 FFSLHGPMDTMSWFSDHGVELKTE---DDGRVFP-----VSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNA 197 (485)
Q Consensus 126 ~l~~~~~~~~~~~~~~~Gi~~~~~---~~g~~~p-----~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~ 197 (485)
+. . ...+.++|+.++|+++... ..+..+| .+.....+...|.+.+++.|+ +++++++| ++..++
T Consensus 77 ~~-~-~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv----~i~~~~~v-~l~~~~- 148 (472)
T 2e5v_A 77 VT-S-EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGI----PIIEDRLV-EIRVKD- 148 (472)
T ss_dssp HH-H-HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTC----CEECCCEE-EEEEET-
T ss_pred HH-H-HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCC----EEEECcEE-EEEEeC-
Confidence 11 1 1346678888999887531 1222222 123356788999999988999 99999999 998764
Q ss_pred CCeEEEEEeeecCCceEEEEcCeEEEecCC--------------CchhHHHHHHCCCceecC
Q 011458 198 GRKFLLKVEKRTMNLVECIEADYLLIASGS--------------SQQGHRLAAQLGHSIVDP 245 (485)
Q Consensus 198 ~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~--------------~~~g~~la~~~G~~i~~~ 245 (485)
+...++...+ ....+.||.||+|||+ +++|+.++...|..+..+
T Consensus 149 ~~v~Gv~v~~----~~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~ 206 (472)
T 2e5v_A 149 GKVTGFVTEK----RGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADM 206 (472)
T ss_dssp TEEEEEEETT----TEEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECT
T ss_pred CEEEEEEEEe----CCCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCC
Confidence 3344555421 0235789999999996 356788899999887655
No 18
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.79 E-value=5.8e-19 Score=188.71 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=63.6
Q ss_pred ccCCHHHHHHHHHHhccCeEEEcccCCCceeEEeeCCcCCC--CCCc----ccccccCCCCeEEEEeeeecccCcchHHH
Q 011458 384 ASVSNNSLISIARLLKHCTLEVAGKGQFKDEFVTAGGVPLS--EISL----NTMESKIHPRLFFAGEVLNVDGVTGGFNF 457 (485)
Q Consensus 384 ~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~a~vt~GGv~~~--ei~~----~t~esk~~~gLy~~GE~lDv~g~~GGynl 457 (485)
.+|+.+...++...+ .++++|+++..|+.+. .||| .|||+|.+|||||||++.+..|+.
T Consensus 341 tslp~~~Q~~~~~~i----------pGle~a~~~r~Gy~ieyd~i~p~~l~~tLe~k~~~gLf~AGqinGt~Gye----- 405 (637)
T 2zxi_A 341 TSLPEEVQWEMYRSI----------PGLENVVLIRPAYAIEYDVVPPTELYPTLETKKIRGLFHAGNFNGTTGYE----- 405 (637)
T ss_dssp CCSCHHHHHHHHTTS----------TTCTTCCEEECCEEEEEEECCGGGBCTTSBBSSSBTEEECGGGGTBCSHH-----
T ss_pred CcCCHHHHHHHHhhC----------cCcccceEeccccccccceEchhhcCccccccCCCCEEEeeecCCcchHH-----
Confidence 345555666666544 6899999999998765 7888 899999999999999766555444
Q ss_pred HHHHHHHHHHHHHHhHHhhhhh
Q 011458 458 QNAWSGGYIAGTSIGKLSNDAT 479 (485)
Q Consensus 458 ~~A~~sG~~AG~~a~~~~~~~~ 479 (485)
+|+++|.+||.+|+.++++++
T Consensus 406 -EAaaqGl~AG~nAa~~~~~~~ 426 (637)
T 2zxi_A 406 -EAAGQGIVAGINAALRAFGKE 426 (637)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999998876543
No 19
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.77 E-value=1.9e-18 Score=183.78 Aligned_cols=192 Identities=16% Similarity=0.161 Sum_probs=122.1
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeec----CCCceeccCCCCcchHHHhhccCCCCccch
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKIS----GGGRCNVTNGHCADKMILAGHYPRGHKEFR 123 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~s----G~g~~n~tn~~~~~~~~~~~~~~~~~~~~~ 123 (485)
..+||+|||||++|++||+.|++ .|.+|+|||+. .++...... ..+.|+......... .-...|..+ ....
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~--~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~-gGag~~sdg-kl~~ 181 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQ--MGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGE-GGAGTFSDG-KLYS 181 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHH--TTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSST-TGGGTTSCC-CCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCeEEEEEccCcccccccchhcccccccccccccceecc-CCcccccCC-ceEE
Confidence 45899999999999999999999 78999999965 333211111 011222211100000 000011111 0000
Q ss_pred hhHhhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEE
Q 011458 124 GSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLL 203 (485)
Q Consensus 124 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V 203 (485)
......+...++.+++...|.+......+...........+.+.|.+.+++.|+ +|+++++|++|..++ ++.+.|
T Consensus 182 ~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv----~I~~~t~V~~I~~~~-~~v~gV 256 (549)
T 3nlc_A 182 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG----EIRFSTRVDDLHMED-GQITGV 256 (549)
T ss_dssp CSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTC----EEESSCCEEEEEESS-SBEEEE
T ss_pred EeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCC----EEEeCCEEEEEEEeC-CEEEEE
Confidence 000011233567788888888755433333222223346788899999999999 999999999998875 455678
Q ss_pred EEeeecCCceEEEEcCeEEEecCCCch-hHHHHHHCCCceecCCCceeEEEeC
Q 011458 204 KVEKRTMNLVECIEADYLLIASGSSQQ-GHRLAAQLGHSIVDPVPSLFTFKIA 255 (485)
Q Consensus 204 ~~~~~~~~~~~~i~ad~VIlAtG~~~~-g~~la~~~G~~i~~~~p~l~~~~~~ 255 (485)
.+.+ +..+.||.||+|+|.++. .+.++...|+++ +..|..+.++++
T Consensus 257 ~l~~-----G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~-~~~~~~vgVrve 303 (549)
T 3nlc_A 257 TLSN-----GEEIKSRHVVLAVGHSARDTFEMLHERGVYM-EAKPFSVGFRIE 303 (549)
T ss_dssp EETT-----SCEEECSCEEECCCTTCHHHHHHHHHTTCCC-EECCEEEEEEEE
T ss_pred EECC-----CCEEECCEEEECCCCChhhHHHHHHHcCCCc-ccceEEEEEEec
Confidence 8775 568999999999998874 567888999884 455666666655
No 20
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.52 E-value=6.8e-14 Score=137.97 Aligned_cols=114 Identities=16% Similarity=0.143 Sum_probs=71.3
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
.+.|||+||||||||++||++|++ .|++|+|+|++..|+ .+ +. +|+. +.. .
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar--~g~~v~lie~~~~gg--------~~--~~-----------~~~~----~~~--~ 54 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGR--ARKQIALFDNNTNRN--------RV--TQ-----------NSHG----FIT--R 54 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCGG--------GG--SS-----------CBCC----STT--C
T ss_pred CCCcCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCC--------ee--ee-----------ecCC----ccC--C
Confidence 346899999999999999999999 689999999876552 11 10 1110 000 0
Q ss_pred hcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEee
Q 011458 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEK 207 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 207 (485)
.... ..++.+.+.+.+.+.+. ..+....+..+...+ .+.+.|.+.+
T Consensus 55 ~~~~-----------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~v~~~~ 100 (304)
T 4fk1_A 55 DGIK-----------------------------PEEFKEIGLNEVMKYPS----VHYYEKTVVMITKQS-TGLFEIVTKD 100 (304)
T ss_dssp TTBC-----------------------------HHHHHHHHHHHHTTSTT----EEEEECCEEEEEECT-TSCEEEEETT
T ss_pred CCCC-----------------------------HHHHHHHHHHHHHhcCC----EEEEeeEEEEeeecC-CCcEEEEECC
Confidence 0001 12233333344444444 444455566665544 4667888775
Q ss_pred ecCCceEEEEcCeEEEecCCCc
Q 011458 208 RTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+.++.+|+||+|||+.+
T Consensus 101 -----g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 101 -----HTKYLAERVLLATGMQE 117 (304)
T ss_dssp -----CCEEEEEEEEECCCCEE
T ss_pred -----CCEEEeCEEEEccCCcc
Confidence 67899999999999854
No 21
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.51 E-value=5.1e-13 Score=131.92 Aligned_cols=112 Identities=23% Similarity=0.383 Sum_probs=72.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
.+|||+||||||||++||++|++ .|++|+|+|++.+| |.| .+..+.+ .|+.. ..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~--~g~~V~liE~~~~g--------G~~--~~~~~i~------~~p~~--~~------ 58 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASR--ANLKTVMIERGIPG--------GQM--ANTEEVE------NFPGF--EM------ 58 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT--------GGG--GGCSCBC------CSTTC--SS------
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCC--------Cee--ecccccC------CcCCc--cc------
Confidence 46999999999999999999999 68999999987776 455 3322221 11100 00
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
....++.........+.+. .+..+..+...... ....+...
T Consensus 59 ------------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~-- 99 (312)
T 4gcm_A 59 ------------------------------ITGPDLSTKMFEHAKKFGA----VYQYGDIKSVEDKG---EYKVINFG-- 99 (312)
T ss_dssp ------------------------------BCHHHHHHHHHHHHHHTTC----EEEECCCCEEEECS---SCEEEECS--
T ss_pred ------------------------------cchHHHHHHHHHHHhhccc----cccceeeeeeeeee---cceeeccC--
Confidence 0112333344445556666 77777666555433 22333333
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+.++++|+||+|||+.+
T Consensus 100 ----~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 100 ----NKELTAKAVIIATGAEY 116 (312)
T ss_dssp ----SCEEEEEEEEECCCEEE
T ss_pred ----CeEEEeceeEEcccCcc
Confidence 57899999999999854
No 22
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.48 E-value=3e-14 Score=140.58 Aligned_cols=119 Identities=18% Similarity=0.259 Sum_probs=77.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
..|||+||||||||++||++|++ .|++|+|+|+...++ .| .+ .+.+......+|+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~--~g~~v~liE~~~~gg--------~~--~~-G~~~~~~~i~~~~------------ 57 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGR--SSLKPVMYEGFMAGG--------VA--AG-GQLTTTTIIENFP------------ 57 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSGGG--------CC--TT-CGGGGSSEECCST------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCC--------cc--cC-CCcCChHHhhhcc------------
Confidence 36899999999999999999999 689999999876552 22 11 1111000000110
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
| ||......++...+.+.+.+.++ ++... .|..+..+. ..+.+.+.+
T Consensus 58 --------------g-----------~~~~i~~~~l~~~~~~~~~~~~~----~~~~~-~v~~~~~~~--~~~~~~~~~- 104 (314)
T 4a5l_A 58 --------------G-----------FPNGIDGNELMMNMRTQSEKYGT----TIITE-TIDHVDFST--QPFKLFTEE- 104 (314)
T ss_dssp --------------T-----------CTTCEEHHHHHHHHHHHHHHTTC----EEECC-CEEEEECSS--SSEEEEETT-
T ss_pred --------------C-----------CcccCCHHHHHHHHHHHHhhcCc----EEEEe-EEEEeecCC--CceEEEECC-
Confidence 0 01111235566777778888898 87655 455555443 445566654
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+.++.+|+||+|||+.+
T Consensus 105 ----~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 105 ----GKEVLTKSVIIATGATA 121 (314)
T ss_dssp ----CCEEEEEEEEECCCEEE
T ss_pred ----CeEEEEeEEEEcccccc
Confidence 67899999999999854
No 23
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.45 E-value=5.2e-13 Score=135.30 Aligned_cols=164 Identities=20% Similarity=0.193 Sum_probs=92.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcceeecCCCceeccCCCCcchHHHhhccCCC--CccchhhH
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRG--HKEFRGSF 126 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~--~~~~~~~~ 126 (485)
.|||+||||||+|+++|+.|++ .|++|+|||| ..++..... |++ ++. ..++.+.-. ........
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~--~G~~V~v~Er~~~~~~~~~~-g~~---l~~-------~~l~~l~~~~~~~~~~~~~ 70 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIGSPVRC-GEG---LSK-------GILNEADIKADRSFIANEV 70 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTTCSCCS-CCE---EET-------HHHHHTTCCCCTTTEEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCCCce-ecc---cCH-------HHHHHcCCCchhhhhhccc
Confidence 5899999999999999999999 7899999996 456543211 111 000 111111100 00000000
Q ss_pred --hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEE
Q 011458 127 --FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLK 204 (485)
Q Consensus 127 --l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~ 204 (485)
...+.+.. ...+.......+..+........+...|.+.+.+.|+ +++++++|+++..++ +....+.
T Consensus 71 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~----~~~~~~~v~~~~~~~-~~~~~v~ 139 (397)
T 3oz2_A 71 KGARIYGPSE------KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGA----DVWVKSPALGVIKEN-GKVAGAK 139 (397)
T ss_dssp SEEEEECTTC------SSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTC----EEESSCCEEEEEEET-TEEEEEE
T ss_pred ceEEEEeCCC------ceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCc----EEeeeeeeeeeeecc-ceeeeee
Confidence 00000000 0000001111111111112346677888899999999 999999999998775 3333443
Q ss_pred EeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 205 VEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 205 ~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
.. ..++..+++||.||.|+|..+ .+.+.+|...
T Consensus 140 ~~--~~~~~~~~~a~~vIgAdG~~S---~vr~~~g~~~ 172 (397)
T 3oz2_A 140 IR--HNNEIVDVRAKMVIAADGFES---EFGRWAGLKS 172 (397)
T ss_dssp EE--ETTEEEEEEEEEEEECCCTTC---HHHHHHTCGG
T ss_pred ec--ccccceEEEEeEEEeCCcccc---HHHHHcCCCc
Confidence 33 233456799999999999876 4666677653
No 24
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.43 E-value=8e-13 Score=132.84 Aligned_cols=179 Identities=16% Similarity=0.075 Sum_probs=105.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCC-c-c------------hHHHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHC-A-D------------KMILAGH 114 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~-~-~------------~~~~~~~ 114 (485)
++||+|||||++|+++|++|++ .|++|+|||+. .++.... ..++.+....... . . ...+...
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~--~G~~V~vlE~~~~~~~~~s-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIGTGTS-SRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAA 80 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSCSTT-SSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCccC-cCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999 78999999976 4542110 0011110000000 0 0 0001110
Q ss_pred c----CCCCccch-hhHhhcCChHHHHHHHHhcCCc-eeec--------------CCCeeeecC--CChHHHHHHHHHHH
Q 011458 115 Y----PRGHKEFR-GSFFSLHGPMDTMSWFSDHGVE-LKTE--------------DDGRVFPVS--DSSSSVIDCLLTEA 172 (485)
Q Consensus 115 ~----~~~~~~~~-~~~l~~~~~~~~~~~~~~~Gi~-~~~~--------------~~g~~~p~~--~~a~~v~~~L~~~l 172 (485)
+ ........ ...-.........++....|++ .... ..+.++|.. .....+...|.+.+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (369)
T 3dme_A 81 RGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDA 160 (369)
T ss_dssp HTCCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHH
T ss_pred cCCCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHH
Confidence 0 00000000 0000001122344555566654 2210 011223322 24678899999999
Q ss_pred HHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHC-CCc
Q 011458 173 KHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQL-GHS 241 (485)
Q Consensus 173 ~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~-G~~ 241 (485)
++.|+ +|+++++|++|..++ ++.+.|.+.+ ++...+.||.||+|+|.+. ..+++.+ |++
T Consensus 161 ~~~Gv----~i~~~~~v~~i~~~~-~~~~~v~~~~---g~~~~~~a~~VV~A~G~~s--~~l~~~~~g~~ 220 (369)
T 3dme_A 161 ESDGA----QLVFHTPLIAGRVRP-EGGFELDFGG---AEPMTLSCRVLINAAGLHA--PGLARRIEGIP 220 (369)
T ss_dssp HHTTC----EEECSCCEEEEEECT-TSSEEEEECT---TSCEEEEEEEEEECCGGGH--HHHHHTEETSC
T ss_pred HHCCC----EEECCCEEEEEEEcC-CceEEEEECC---CceeEEEeCEEEECCCcch--HHHHHHhcCCC
Confidence 99999 999999999999875 4457787764 2225899999999999875 5788888 875
No 25
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.40 E-value=1e-12 Score=132.84 Aligned_cols=183 Identities=14% Similarity=0.095 Sum_probs=105.9
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCC------cchHHHhhccCCC---
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHC------ADKMILAGHYPRG--- 118 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~------~~~~~~~~~~~~~--- 118 (485)
.++||+|||||++|+++|++|++ |.+|+|||+. .++........|..+...... .....++..+...
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La~---G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLSA---HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCE 84 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHhC---CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCC
Confidence 46899999999999999999994 7899999976 565211100111111100000 0000111111100
Q ss_pred Cccchh-hHh---hcCC---hHHHHHHHHhcCCceeec-----------------CCCeeeecC--CChHHHHHHHHHHH
Q 011458 119 HKEFRG-SFF---SLHG---PMDTMSWFSDHGVELKTE-----------------DDGRVFPVS--DSSSSVIDCLLTEA 172 (485)
Q Consensus 119 ~~~~~~-~~l---~~~~---~~~~~~~~~~~Gi~~~~~-----------------~~g~~~p~~--~~a~~v~~~L~~~l 172 (485)
...+.. ..+ .... .....++++..|+++..- ..+.++|.. ..+..++..|.+.+
T Consensus 85 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 164 (381)
T 3nyc_A 85 HPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGI 164 (381)
T ss_dssp SCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHH
T ss_pred cccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHH
Confidence 000100 000 0000 112234444555543210 112233322 24578999999999
Q ss_pred HHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCceecCCCc
Q 011458 173 KHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPS 248 (485)
Q Consensus 173 ~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i~~~~p~ 248 (485)
++.|+ +|+++++|++|..++ +.+.|++.+ ..+.||.||+|+|++. ..++..+|++..+..|.
T Consensus 165 ~~~Gv----~i~~~~~V~~i~~~~--~~~~V~t~~------g~i~a~~VV~A~G~~s--~~l~~~~g~~~~~~~p~ 226 (381)
T 3nyc_A 165 RRNQG----QVLCNHEALEIRRVD--GAWEVRCDA------GSYRAAVLVNAAGAWC--DAIAGLAGVRPLGLQPK 226 (381)
T ss_dssp HHTTC----EEESSCCCCEEEEET--TEEEEECSS------EEEEESEEEECCGGGH--HHHHHHHTCCCCCCEEE
T ss_pred HHCCC----EEEcCCEEEEEEEeC--CeEEEEeCC------CEEEcCEEEECCChhH--HHHHHHhCCCCCceeee
Confidence 99999 999999999999875 568888764 3899999999999876 46777778652234443
No 26
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.39 E-value=3.1e-12 Score=130.61 Aligned_cols=175 Identities=18% Similarity=0.191 Sum_probs=101.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcc--------hHH----HhhccCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCAD--------KMI----LAGHYPR 117 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~--------~~~----~~~~~~~ 117 (485)
++||+|||||++|+++|++|++ .|.+|+|||+...+.....|++....+......+ ... +......
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~--~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE--RGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCER 81 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCc
Confidence 4799999999999999999999 6899999997654431112221111111110000 000 1000000
Q ss_pred C----CccchhhHhh----cCChHHHHHHHHhcCCceeec-----------------CCCeeeecC--CChHHHHHHHHH
Q 011458 118 G----HKEFRGSFFS----LHGPMDTMSWFSDHGVELKTE-----------------DDGRVFPVS--DSSSSVIDCLLT 170 (485)
Q Consensus 118 ~----~~~~~~~~l~----~~~~~~~~~~~~~~Gi~~~~~-----------------~~g~~~p~~--~~a~~v~~~L~~ 170 (485)
. ...+....-. .....+..++++..|+++..- ..+.++|.. .....++..|.+
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 161 (397)
T 2oln_A 82 RLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFT 161 (397)
T ss_dssp CCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHH
T ss_pred cHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHH
Confidence 0 0000000000 011234455666666653210 001122211 124678889999
Q ss_pred HHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCC
Q 011458 171 EAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 240 (485)
Q Consensus 171 ~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~ 240 (485)
.+++.|+ +|+++++|++|..++ +.+.|.+.+ ..++||.||+|+|++. ..+++.+|.
T Consensus 162 ~a~~~Gv----~i~~~~~V~~i~~~~--~~v~v~t~~------g~i~a~~VV~A~G~~s--~~l~~~~g~ 217 (397)
T 2oln_A 162 LAQAAGA----TLRAGETVTELVPDA--DGVSVTTDR------GTYRAGKVVLACGPYT--NDLLEPLGA 217 (397)
T ss_dssp HHHHTTC----EEEESCCEEEEEEET--TEEEEEESS------CEEEEEEEEECCGGGH--HHHHGGGTC
T ss_pred HHHHcCC----EEECCCEEEEEEEcC--CeEEEEECC------CEEEcCEEEEcCCcCh--HHHhhhcCC
Confidence 9999999 999999999998764 567776653 4799999999999875 356667774
No 27
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.38 E-value=5.7e-12 Score=130.44 Aligned_cols=84 Identities=15% Similarity=0.180 Sum_probs=62.9
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCc---eEEEEEEcCCCCeEE-EEEeeecCCceEEEEcCeEEEecCCCchhHHHH
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGK---VVTTASSDNAGRKFL-LKVEKRTMNLVECIEADYLLIASGSSQQGHRLA 235 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~---~V~~i~~~~~~~~~~-V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la 235 (485)
.+..++..|.+.+++.|| +|++++ +|++|..++ +.+. |++.+ +.++.||.||+|+|++.. .++
T Consensus 159 ~~~~~~~~L~~~a~~~Gv----~i~~~t~~~~V~~i~~~~--~~v~gV~t~~-----G~~i~Ad~VV~AtG~~s~--~l~ 225 (438)
T 3dje_A 159 HARNALVAAAREAQRMGV----KFVTGTPQGRVVTLIFEN--NDVKGAVTAD-----GKIWRAERTFLCAGASAG--QFL 225 (438)
T ss_dssp CHHHHHHHHHHHHHHTTC----EEEESTTTTCEEEEEEET--TEEEEEEETT-----TEEEECSEEEECCGGGGG--GTS
T ss_pred cHHHHHHHHHHHHHhcCC----EEEeCCcCceEEEEEecC--CeEEEEEECC-----CCEEECCEEEECCCCChh--hhc
Confidence 357889999999999999 999999 999998864 4554 88875 568999999999998763 333
Q ss_pred HHCCCceecCCCceeEEEeCCc
Q 011458 236 AQLGHSIVDPVPSLFTFKIADS 257 (485)
Q Consensus 236 ~~~G~~i~~~~p~l~~~~~~~~ 257 (485)
. ++.++.|....++.+.+.+.
T Consensus 226 ~-l~~~~~p~~~~~~~~~l~~~ 246 (438)
T 3dje_A 226 D-FKNQLRPTAWTLVHIALKPE 246 (438)
T ss_dssp C-CTTCCEEEEEEEEEEECCGG
T ss_pred C-cccceeeEEEEEEEEEcChH
Confidence 3 55566555444555555543
No 28
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.37 E-value=1e-11 Score=123.92 Aligned_cols=128 Identities=17% Similarity=0.178 Sum_probs=84.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
++||+|||||++|+++|+.|++ .|.+|+|+|+. .+| |.|....... ... .+.. ..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~--~g~~v~vie~~~~~g--------g~~~~~~~~~--------~~~--~~~~----~~ 58 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR--SGLSYVILDAEASPG--------GAWQHAWHSL--------HLF--SPAG----WS 58 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--SSCCEEEECCSSSSS--------GGGGGSCTTC--------BCS--SCGG----GS
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCC--------CcccCCCCCc--------Eec--Cchh----hh
Confidence 4799999999999999999999 68999999965 555 2331111000 000 0000 00
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEE-EEEee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFL-LKVEK 207 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~-V~~~~ 207 (485)
.+. +.... .....|| ....+.+.+.+.+++.|+ +++++++|+++..++ +.|. |.+.+
T Consensus 59 ~~~-----------~~~~~--~~~~~~~---~~~~~~~~l~~~~~~~~~----~~~~~~~v~~i~~~~--~~~~~v~~~~ 116 (357)
T 4a9w_A 59 SIP-----------GWPMP--ASQGPYP---ARAEVLAYLAQYEQKYAL----PVLRPIRVQRVSHFG--ERLRVVARDG 116 (357)
T ss_dssp CCS-----------SSCCC--CCSSSSC---BHHHHHHHHHHHHHHTTC----CEECSCCEEEEEEET--TEEEEEETTS
T ss_pred hCC-----------CCCCC--CCccCCC---CHHHHHHHHHHHHHHcCC----EEEcCCEEEEEEECC--CcEEEEEeCC
Confidence 000 00000 1112222 346778888899999999 999999999998874 6777 77764
Q ss_pred ecCCceEEEEcCeEEEecCCCc
Q 011458 208 RTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+ .+.+|.||+|||..+
T Consensus 117 -----g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 117 -----R-QWLARAVISATGTWG 132 (357)
T ss_dssp -----C-EEEEEEEEECCCSGG
T ss_pred -----C-EEEeCEEEECCCCCC
Confidence 3 899999999999743
No 29
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.37 E-value=4.9e-12 Score=128.45 Aligned_cols=172 Identities=16% Similarity=0.200 Sum_probs=99.9
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcc----------hH----HHhhc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCAD----------KM----ILAGH 114 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~----------~~----~~~~~ 114 (485)
+++||+|||||++|+++|++|++ .|.+|+|||+...+.....|+. ...+.+..... .. .+...
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~--~G~~V~vie~~~~~~~~g~s~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 78 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAK--QGVKTLLVDAFDPPHTNGSHHG-DTRIIRHAYGEGREYVPLALRSQELWYELEKE 78 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCSSCSSSSSCS-SEEEECSSCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCCCCCCC-cchhhhhhhcCCchHHHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999 6899999997755431111111 11111110000 00 11111
Q ss_pred cCCCCccchh-h--HhhcC-C---hHHHHHHHHhcCCceeecC-----------------CCeeeecC--CChHHHHHHH
Q 011458 115 YPRGHKEFRG-S--FFSLH-G---PMDTMSWFSDHGVELKTED-----------------DGRVFPVS--DSSSSVIDCL 168 (485)
Q Consensus 115 ~~~~~~~~~~-~--~l~~~-~---~~~~~~~~~~~Gi~~~~~~-----------------~g~~~p~~--~~a~~v~~~L 168 (485)
+... .+.. . .+... . .....++++..|+++..-. .+.++|.. ..+..++..|
T Consensus 79 ~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (389)
T 2gf3_A 79 THHK--IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAY 156 (389)
T ss_dssp CSSC--CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHH
T ss_pred hCCc--ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHH
Confidence 1100 0000 0 00000 0 1233445555665432100 01112211 1246788999
Q ss_pred HHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCC
Q 011458 169 LTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 239 (485)
Q Consensus 169 ~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G 239 (485)
.+.+++.|+ +++++++|++++.++ +.+.|.+.+ ..+.||.||+|+|.+. ..++..+|
T Consensus 157 ~~~~~~~Gv----~i~~~~~v~~i~~~~--~~~~v~~~~------g~~~a~~vV~A~G~~~--~~l~~~~g 213 (389)
T 2gf3_A 157 RELAEARGA----KVLTHTRVEDFDISP--DSVKIETAN------GSYTADKLIVSMGAWN--SKLLSKLN 213 (389)
T ss_dssp HHHHHHTTC----EEECSCCEEEEEECS--SCEEEEETT------EEEEEEEEEECCGGGH--HHHGGGGT
T ss_pred HHHHHHCCC----EEEcCcEEEEEEecC--CeEEEEeCC------CEEEeCEEEEecCccH--HHHhhhhc
Confidence 999999999 999999999998864 457777653 4799999999999875 34556666
No 30
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.36 E-value=4.3e-12 Score=128.65 Aligned_cols=68 Identities=21% Similarity=0.191 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCC
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 239 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G 239 (485)
....+...|.+.+++.|+ +++++++|++|..++ +.+.|.+.+ + .+.||.||+|+|.+. ..++..+|
T Consensus 162 ~~~~~~~~l~~~~~~~g~----~i~~~~~v~~i~~~~--~~~~v~~~~-----g-~~~a~~vV~A~G~~s--~~l~~~~~ 227 (382)
T 1ryi_A 162 EPYFVCKAYVKAAKMLGA----EIFEHTPVLHVERDG--EALFIKTPS-----G-DVWANHVVVASGVWS--GMFFKQLG 227 (382)
T ss_dssp CHHHHHHHHHHHHHHTTC----EEETTCCCCEEECSS--SSEEEEETT-----E-EEEEEEEEECCGGGT--HHHHHHTT
T ss_pred cHHHHHHHHHHHHHHCCC----EEEcCCcEEEEEEEC--CEEEEEcCC-----c-eEEcCEEEECCChhH--HHHHHhcC
Confidence 357789999999999999 999999999998764 456777654 3 799999999999875 35777777
Q ss_pred Cc
Q 011458 240 HS 241 (485)
Q Consensus 240 ~~ 241 (485)
..
T Consensus 228 ~~ 229 (382)
T 1ryi_A 228 LN 229 (382)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 31
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.36 E-value=7.1e-12 Score=127.12 Aligned_cols=182 Identities=19% Similarity=0.137 Sum_probs=104.3
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcce--eecCCCceeccCCCCc----chHHHh----hc----
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKV--KISGGGRCNVTNGHCA----DKMILA----GH---- 114 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~--~~sG~g~~n~tn~~~~----~~~~~~----~~---- 114 (485)
.++||+|||||++|+++|++|++ .|.+|+|||+..++... ..+|.-++........ ....++ ..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~--~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAK--RGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFS 81 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 36899999999999999999999 68999999977665311 1111111111110000 000011 10
Q ss_pred cCCCCccch---hhHhhcCChHHHHHHHHhcCCceeecC-----------------CCeeeecC--CChHHHHHHHHHHH
Q 011458 115 YPRGHKEFR---GSFFSLHGPMDTMSWFSDHGVELKTED-----------------DGRVFPVS--DSSSSVIDCLLTEA 172 (485)
Q Consensus 115 ~~~~~~~~~---~~~l~~~~~~~~~~~~~~~Gi~~~~~~-----------------~g~~~p~~--~~a~~v~~~L~~~l 172 (485)
|........ ..... ......++++..|+++.... .+.++|.. .....+...|.+.+
T Consensus 82 ~~~~g~l~~~~~~~~~~--~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 159 (382)
T 1y56_B 82 FKQTGYLFLLYDDEEVK--TFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKA 159 (382)
T ss_dssp EECCCEEEEECSHHHHH--HHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHH
T ss_pred eeccceEEEEeCHHHHH--HHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHH
Confidence 000000000 00000 01223344555665533110 01122322 23578889999999
Q ss_pred HHCCCCCccEEEeCceEEEEEEcCCCCeEE-EEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce-ecCCCc
Q 011458 173 KHRGVAPSVVLQTGKVVTTASSDNAGRKFL-LKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI-VDPVPS 248 (485)
Q Consensus 173 ~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~-V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i-~~~~p~ 248 (485)
++.|+ +++++++|+++..++ +.+. |++.+ + .++||.||+|+|.++ ..++..+|... .|..|.
T Consensus 160 ~~~Gv----~i~~~~~v~~i~~~~--~~v~gv~~~~-----g-~i~a~~VV~A~G~~s--~~l~~~~g~~~~~~~~~~ 223 (382)
T 1y56_B 160 KEYGA----KLLEYTEVKGFLIEN--NEIKGVKTNK-----G-IIKTGIVVNATNAWA--NLINAMAGIKTKIPIEPY 223 (382)
T ss_dssp HHTTC----EEECSCCEEEEEESS--SBEEEEEETT-----E-EEECSEEEECCGGGH--HHHHHHHTCCSCCCCEEE
T ss_pred HHCCC----EEECCceEEEEEEEC--CEEEEEEECC-----c-EEECCEEEECcchhH--HHHHHHcCCCcCcCCCee
Confidence 99999 999999999998875 4454 77764 3 799999999999876 34666667551 244443
No 32
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.35 E-value=1e-11 Score=135.95 Aligned_cols=74 Identities=12% Similarity=0.170 Sum_probs=57.2
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCC
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 239 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G 239 (485)
....++..|.+.+++.|+ +|+++++|++|..++ +.+.|.+.+ +.++.||.||+|+|++.. .++...+
T Consensus 415 ~p~~l~~aL~~~a~~~Gv----~i~~~t~V~~l~~~~--~~v~V~t~~-----G~~i~Ad~VVlAtG~~s~--~l~~~~~ 481 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGL----QIYYQYQLQNFSRKD--DCWLLNFAG-----DQQATHSVVVLANGHQIS--RFSQTST 481 (676)
T ss_dssp CHHHHHHHHHHHHHHTTC----EEEESCCEEEEEEET--TEEEEEETT-----SCEEEESEEEECCGGGGG--CSTTTTT
T ss_pred CHHHHHHHHHHHHHhCCC----EEEeCCeeeEEEEeC--CeEEEEECC-----CCEEECCEEEECCCcchh--ccccccC
Confidence 457889999999999999 999999999999875 568888764 467999999999998752 2333445
Q ss_pred CceecCC
Q 011458 240 HSIVDPV 246 (485)
Q Consensus 240 ~~i~~~~ 246 (485)
+++.+..
T Consensus 482 lpl~p~r 488 (676)
T 3ps9_A 482 LPVYSVA 488 (676)
T ss_dssp CSCEEEE
T ss_pred Ccceeec
Confidence 4444433
No 33
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.34 E-value=9.1e-12 Score=127.14 Aligned_cols=184 Identities=18% Similarity=0.123 Sum_probs=105.4
Q ss_pred CCCCcEEEECcchHHHHHHHHHhc-cCCC-CcEEEEeCCCCCc--ceeecCCCceeccCCCCcc----hHHHh----hcc
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKT-VAPK-LNVVIIEKGKPLS--KVKISGGGRCNVTNGHCAD----KMILA----GHY 115 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~-~~~g-~~V~llE~~~~g~--k~~~sG~g~~n~tn~~~~~----~~~~~----~~~ 115 (485)
+.++||+|||||++|+++|++|++ . | .+|+|||+..++. +...+|.-++......... ...++ ...
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~--G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 96 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNH--GITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDL 96 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHH--CCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhc--CCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 456899999999999999999998 5 6 8999999766553 1111111121111100000 00000 000
Q ss_pred CCCCccchh-hHhh-cCC------hHHHHHHHHhcCCceeec----------------------CCCeeeecC--CChHH
Q 011458 116 PRGHKEFRG-SFFS-LHG------PMDTMSWFSDHGVELKTE----------------------DDGRVFPVS--DSSSS 163 (485)
Q Consensus 116 ~~~~~~~~~-~~l~-~~~------~~~~~~~~~~~Gi~~~~~----------------------~~g~~~p~~--~~a~~ 163 (485)
... ..+.. ..+. ... .....++++..|+++..- ..+.++|.. ..+..
T Consensus 97 ~~~-~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (405)
T 2gag_B 97 EYD-FLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDH 175 (405)
T ss_dssp TCC-CCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHH
T ss_pred CCC-cCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHH
Confidence 000 00000 0000 000 112334455566543210 011222322 23567
Q ss_pred HHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCcee
Q 011458 164 VIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIV 243 (485)
Q Consensus 164 v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i~ 243 (485)
+.+.|.+.+++.|+ +++++++|++|..++ +..+.|.+.+ + .+.||.||+|+|++. ..+++.+|+.+
T Consensus 176 ~~~~l~~~~~~~g~----~i~~~~~v~~i~~~~-~~~~~v~~~~-----g-~~~a~~vV~a~G~~s--~~l~~~~g~~~- 241 (405)
T 2gag_B 176 VAWAFARKANEMGV----DIIQNCEVTGFIKDG-EKVTGVKTTR-----G-TIHAGKVALAGAGHS--SVLAEMAGFEL- 241 (405)
T ss_dssp HHHHHHHHHHHTTC----EEECSCCEEEEEESS-SBEEEEEETT-----C-CEEEEEEEECCGGGH--HHHHHHHTCCC-
T ss_pred HHHHHHHHHHHCCC----EEEcCCeEEEEEEeC-CEEEEEEeCC-----c-eEECCEEEECCchhH--HHHHHHcCCCC-
Confidence 88999999999999 999999999998875 4557777764 3 799999999999876 35666777653
Q ss_pred cCCCc
Q 011458 244 DPVPS 248 (485)
Q Consensus 244 ~~~p~ 248 (485)
|..|.
T Consensus 242 ~~~~~ 246 (405)
T 2gag_B 242 PIQSH 246 (405)
T ss_dssp CEEEE
T ss_pred Ccccc
Confidence 33343
No 34
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.34 E-value=4.2e-12 Score=139.37 Aligned_cols=73 Identities=10% Similarity=0.145 Sum_probs=55.7
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceE-EEEcCeEEEecCCCchhHHHHHHC
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE-CIEADYLLIASGSSQQGHRLAAQL 238 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~-~i~ad~VIlAtG~~~~g~~la~~~ 238 (485)
....++..|.+.+++.|+ +|+++++|++|..++ +.+.|.+.+ +. .+.||.||+|+|++.. .++...
T Consensus 410 ~p~~l~~aL~~~a~~~Gv----~i~~~t~V~~l~~~~--~~v~V~t~~-----G~~~i~Ad~VVlAtG~~s~--~l~~~~ 476 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGM----TCHYQHELQRLKRID--SQWQLTFGQ-----SQAAKHHATVILATGHRLP--EWEQTH 476 (689)
T ss_dssp CHHHHHHHHHHHHHHTTC----EEEESCCEEEEEECS--SSEEEEEC------CCCCEEESEEEECCGGGTT--CSTTTT
T ss_pred CHHHHHHHHHHHHHhCCC----EEEeCCeEeEEEEeC--CeEEEEeCC-----CcEEEECCEEEECCCcchh--cccccc
Confidence 457889999999999999 999999999999875 457888765 44 7999999999998652 233334
Q ss_pred CCceecC
Q 011458 239 GHSIVDP 245 (485)
Q Consensus 239 G~~i~~~ 245 (485)
+.++.+.
T Consensus 477 ~lpl~p~ 483 (689)
T 3pvc_A 477 HLPLSAV 483 (689)
T ss_dssp TSCCEEE
T ss_pred CCccccc
Confidence 5444433
No 35
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.33 E-value=9.4e-12 Score=123.80 Aligned_cols=115 Identities=18% Similarity=0.312 Sum_probs=81.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
.+||+|||||++|+++|++|++ .|++|+|+|+. .+| |.|... ++. ..+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~g--------g~~~~~-------------~~~--~~~~----- 54 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM--RGLSFRFVDPLPEPG--------GQLTAL-------------YPE--KYIY----- 54 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSC--------HHHHHT-------------CTT--SEEC-----
T ss_pred cCcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCC--------Ceeecc-------------CCC--ceee-----
Confidence 5799999999999999999998 68999999965 444 333111 100 0000
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
... +. | ......+.+.+.+.+.+.++ +++++++|+++..++ +.+.|.+.+
T Consensus 55 ~~~-----------~~-----------~-~~~~~~~~~~l~~~~~~~~~----~~~~~~~v~~i~~~~--~~~~v~~~~- 104 (335)
T 2zbw_A 55 DVA-----------GF-----------P-KVYAKDLVKGLVEQVAPFNP----VYSLGERAETLEREG--DLFKVTTSQ- 104 (335)
T ss_dssp CST-----------TC-----------S-SEEHHHHHHHHHHHHGGGCC----EEEESCCEEEEEEET--TEEEEEETT-
T ss_pred ccC-----------CC-----------C-CCCHHHHHHHHHHHHHHcCC----EEEeCCEEEEEEECC--CEEEEEECC-
Confidence 000 00 0 01135567777788888899 999999999998774 477787764
Q ss_pred cCCceEEEEcCeEEEecCCC
Q 011458 209 TMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~ 228 (485)
+..+.+|.||+|||+.
T Consensus 105 ----g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 105 ----GNAYTAKAVIIAAGVG 120 (335)
T ss_dssp ----SCEEEEEEEEECCTTS
T ss_pred ----CCEEEeCEEEECCCCC
Confidence 5679999999999984
No 36
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.25 E-value=3.5e-11 Score=121.39 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..++..|.+.+++.|+ +++++++|++|..++ +.+.|.+.+ + .+.||.||+|+|++.
T Consensus 148 ~~~l~~~l~~~~~~~G~----~i~~~~~V~~i~~~~--~~~~v~~~~-----g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGC----AQLFNCPVTAIRHDD--DGVTIETAD-----G-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHHTTC----EEECSCCEEEEEECS--SSEEEEESS-----C-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHHCCC----EEEcCCEEEEEEEcC--CEEEEEECC-----C-eEEcCEEEEcCCccH
Confidence 46788999999999999 999999999998865 457777764 3 599999999999865
No 37
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.21 E-value=2.2e-10 Score=117.69 Aligned_cols=155 Identities=20% Similarity=0.179 Sum_probs=93.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
++||+|||||++|+++|+.|++ .|.+|+|||+....+. +.|.+ .+.... .++..+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~--~G~~V~v~E~~~~~~~----~~g~~--~~~~~~---~~l~~~-------------- 59 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK--SGFKVKIVEKQKFPRF----VIGES--LLPRCM---EHLDEA-------------- 59 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCSSCC----CSCCB--CCGGGH---HHHHHT--------------
T ss_pred cCcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCC----cccCc--ccHhHH---HHHHHc--------------
Confidence 4899999999999999999999 6899999997644321 11111 110100 111111
Q ss_pred CChHHHHHHHHhcCCce------eecC------------CCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEE
Q 011458 130 HGPMDTMSWFSDHGVEL------KTED------------DGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTT 191 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~------~~~~------------~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~ 191 (485)
+. .+.+...+... .... ....+........+...|.+.+++.|+ +++++++|++
T Consensus 60 -g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv----~i~~~~~v~~ 131 (421)
T 3nix_A 60 -GF---LDAVKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGV----DVEYEVGVTD 131 (421)
T ss_dssp -TC---HHHHHHTTCEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTC----EEECSEEEEE
T ss_pred -CC---hHHHHHcCCcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCC----EEEcCCEEEE
Confidence 10 01111111110 0000 000111124467788899999999999 9999999999
Q ss_pred EEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCcee
Q 011458 192 ASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIV 243 (485)
Q Consensus 192 i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i~ 243 (485)
+..++ +.+.+.... .++...+++||.||+|+|..+ .+.+.+|.+..
T Consensus 132 i~~~~--~~~~v~v~~-~~g~~~~~~a~~vV~A~G~~s---~l~~~~g~~~~ 177 (421)
T 3nix_A 132 IKFFG--TDSVTTIED-INGNKREIEARFIIDASGYGR---VIPRMFGLDKP 177 (421)
T ss_dssp EEEET--TEEEEEEEE-TTSCEEEEEEEEEEECCGGGC---HHHHHTTCEEC
T ss_pred EEEeC--CEEEEEEEc-CCCCEEEEEcCEEEECCCCch---hhHHhcCCCCC
Confidence 98774 444443322 122233799999999999876 45677787653
No 38
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.21 E-value=1.2e-10 Score=124.65 Aligned_cols=76 Identities=18% Similarity=0.144 Sum_probs=59.5
Q ss_pred CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHC
Q 011458 159 DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQL 238 (485)
Q Consensus 159 ~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~ 238 (485)
.+...+...|.+.+.+.|+ +|+++++|+++..++ ++.++|.+.+...++...+.||.||+|+|.+. -.+++.+
T Consensus 167 vd~~~l~~~L~~~a~~~G~----~i~~~~~V~~l~~~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s--~~l~~~~ 239 (561)
T 3da1_A 167 TDDARLTLEIMKEAVARGA----VALNYMKVESFIYDQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV--DTLREKD 239 (561)
T ss_dssp CCHHHHHHHHHHHHHHTTC----EEEESEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH--HHHHHTT
T ss_pred EcHHHHHHHHHHHHHHcCC----EEEcCCEEEEEEEcC-CeEEEEEEEEcCCCceEEEECCEEEECCCcch--HHHHHhc
Confidence 4567888999999999999 999999999999875 44567877642234456899999999999876 3566767
Q ss_pred CCc
Q 011458 239 GHS 241 (485)
Q Consensus 239 G~~ 241 (485)
|..
T Consensus 240 g~~ 242 (561)
T 3da1_A 240 RSK 242 (561)
T ss_dssp TCC
T ss_pred CCC
Confidence 754
No 39
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.20 E-value=1.1e-10 Score=114.13 Aligned_cols=141 Identities=16% Similarity=0.156 Sum_probs=92.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCC-CCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~-g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
++||+|||||++|+++|+.|++ . |.+|+|||+. .++. .+.... .... .....
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~--~~G~~V~viEk~~~~gg--------~~~~~~-~~~~------------~~~~~--- 92 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISK--NPNVQVAIIEQSVSPGG--------GAWLGG-QLFS------------AMIVR--- 92 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--STTSCEEEEESSSSCCT--------TTTCCS-TTCC------------CEEEE---
T ss_pred ccCEEEECccHHHHHHHHHHHH--cCCCeEEEEECCCCCCC--------ceecCC-cchH------------HHHcC---
Confidence 5799999999999999999998 5 8999999965 4442 111110 0000 00100
Q ss_pred hcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHH-CCCCCccEEEeCceEEEEEEcCCCCeEEEEEe
Q 011458 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVAPSVVLQTGKVVTTASSDNAGRKFLLKVE 206 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~-~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~ 206 (485)
....+|+.++|+++... +.+++ ......+...|.+.+.+ .|+ +++++++|+++..++ +....|.+.
T Consensus 93 -----~~~~~~l~~~G~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~gv----~i~~~~~V~~i~~~~-~~v~gv~~~ 159 (284)
T 1rp0_A 93 -----KPAHLFLDEIGVAYDEQ--DTYVV-VKHAALFTSTIMSKLLARPNV----KLFNAVAAEDLIVKG-NRVGGVVTN 159 (284)
T ss_dssp -----TTTHHHHHHHTCCCEEC--SSEEE-ESCHHHHHHHHHHHHHTSTTE----EEEETEEEEEEEEET-TEEEEEEEE
T ss_pred -----cHHHHHHHHcCCCcccC--CCEEE-ecCHHHHHHHHHHHHHhcCCC----EEEcCcEEEEEEecC-CeEEEEEEe
Confidence 01246777888877643 33332 22456777888888876 699 999999999998764 333456553
Q ss_pred ee---------cCCceEEEEcCeEEEecCCCc
Q 011458 207 KR---------TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 207 ~~---------~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.. ..++...+.||.||+|+|+.+
T Consensus 160 ~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 160 WALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp EHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred ccccccccCccccCceEEEECCEEEECCCCch
Confidence 10 001236799999999999754
No 40
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.20 E-value=6.1e-12 Score=132.76 Aligned_cols=176 Identities=21% Similarity=0.205 Sum_probs=101.0
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
...+||+|||||++|+++|+.|++ .|.+|+|||+. .++ +|+..+... .....
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~--~G~~V~liEk~~~~g---------~~~~~~~~~-~~~~~--------------- 142 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELAL--LGARVVLVEKRIKFS---------RHNVLHLWP-FTIHD--------------- 142 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCSSCC---------CCCEEECCH-HHHHH---------------
T ss_pred cCCCCEEEECccHHHHHHHHHHHH--CCCeEEEEEeccccC---------CCCcccCCh-hHHHH---------------
Confidence 346899999999999999999999 68999999965 333 333333110 00000
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcC-CCCeEEEEE
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDN-AGRKFLLKV 205 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~-~~~~~~V~~ 205 (485)
+..++..+ + .+. +.... -..+ ....+.+.|.+.+++.|+ +++++++|+++..++ +++.+.|.+
T Consensus 143 l~~~g~~~---~---~~~-~~~~~-~~~~----~~~~l~~~L~~~~~~~gv----~v~~~~~v~~i~~~~~~~~~~~v~~ 206 (497)
T 2bry_A 143 LRALGAKK---F---YGR-FCTGT-LDHI----SIRQLQLLLLKVALLLGV----EIHWGVKFTGLQPPPRKGSGWRAQL 206 (497)
T ss_dssp HHTTTHHH---H---CTT-TTCTT-CCEE----EHHHHHHHHHHHHHHTTC----EEEESCEEEEEECCCSTTCCBEEEE
T ss_pred HHHcCCcc---c---ccc-ccccc-cccC----CHHHHHHHHHHHHHhCCC----EEEeCCEEEEEEEecCCCCEEEEEE
Confidence 11111100 0 000 00000 0111 236788889999999999 999999999998641 124577776
Q ss_pred eeecCCceEEEEcCeEEEecCCCchh--HHHHHHCCCceecCCCceeEE-EeCCcccccccCcc
Q 011458 206 EKRTMNLVECIEADYLLIASGSSQQG--HRLAAQLGHSIVDPVPSLFTF-KIADSQLTELSGVS 266 (485)
Q Consensus 206 ~~~~~~~~~~i~ad~VIlAtG~~~~g--~~la~~~G~~i~~~~p~l~~~-~~~~~~~~~l~G~~ 266 (485)
.+..+++...+.||.||+|+|+.+.. +......|+.+.+..+.++++ ...+.+...+.|++
T Consensus 207 ~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~G~~ 270 (497)
T 2bry_A 207 QPNPPAQLASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNGRTVEETQVPEISGVA 270 (497)
T ss_dssp ESCCCHHHHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSCCBCC--
T ss_pred EECCCCCEEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeeeccccccchhhcCceE
Confidence 32001111468999999999986531 111223345544555555554 33334444555653
No 41
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.20 E-value=1.1e-10 Score=125.48 Aligned_cols=155 Identities=19% Similarity=0.233 Sum_probs=94.9
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
+.+||+|||||++|+++|+.|++ .|.+|+|||+...++. +.|.. .. .....+++.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar--~G~~V~LiEr~~~~~~----~~G~~--l~---p~~~~~l~~l------------- 77 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHK--LGHDVTIYERSAFPRY----RVGES--LL---PGTMSILNRL------------- 77 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCSSCC----CCCCB--CC---HHHHHHHHHT-------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHc--CCCCEEEEcCCCCCCC----ceeee--EC---HHHHHHHHHc-------------
Confidence 35899999999999999999999 6899999997644321 00100 00 0000111111
Q ss_pred cCChHHHHHHHHhcCCce-----------------eecCC-----CeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeC
Q 011458 129 LHGPMDTMSWFSDHGVEL-----------------KTEDD-----GRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTG 186 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~-----------------~~~~~-----g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~ 186 (485)
+.. +.+...+... ..... ...+........+...|.+.+++.|| +++++
T Consensus 78 --Gl~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv----~i~~g 148 (591)
T 3i3l_A 78 --GLQ---EKIDAQNYVKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGI----TVHEE 148 (591)
T ss_dssp --TCH---HHHHHHCCEEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTC----EEETT
T ss_pred --CCc---HHHHhcCCcccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCC----EEEeC
Confidence 100 0111111100 00000 00011123467788899999999999 99999
Q ss_pred ceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 187 KVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 187 ~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
++|+++..++ +..+.|.+.+ +++..++.||.||.|+|..+ .+.+.+|.+.
T Consensus 149 ~~V~~v~~~~-g~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S---~lr~~lg~~~ 198 (591)
T 3i3l_A 149 TPVTDVDLSD-PDRVVLTVRR--GGESVTVESDFVIDAGGSGG---PISRKLGVRQ 198 (591)
T ss_dssp CCEEEEECCS-TTCEEEEEEE--TTEEEEEEESEEEECCGGGC---HHHHHHTCEE
T ss_pred CEEEEEEEcC-CCEEEEEEec--CCceEEEEcCEEEECCCCcc---hhHHHcCCCC
Confidence 9999998764 4678887763 12236899999999999866 3556667653
No 42
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.19 E-value=1.8e-10 Score=117.12 Aligned_cols=163 Identities=17% Similarity=0.117 Sum_probs=93.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCc-cchhhHh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHK-EFRGSFF 127 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~-~~~~~~l 127 (485)
++||+|||||++|+++|+.|++ .|.+|+|||+.. ++......+ .. . . ...+.+.-... .......
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~--~G~~V~l~E~~~~~g~~~~~~~--~~--~-----~--~~~~~lg~~~~~~~~~~~~ 70 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIGSPVRCGE--GL--S-----K--GILNEADIKADRSFIANEV 70 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTTCSCCSCC--EE--E-----T--HHHHHTTCCCCTTTEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCCCccccc--cc--C-----H--HHHHHcCCCCChHHhhhhc
Confidence 4799999999999999999999 689999999764 442111110 00 0 0 11122211000 0000000
Q ss_pred hcCChHHHHHHHHhcCCc-eeecCC--CeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEE-E
Q 011458 128 SLHGPMDTMSWFSDHGVE-LKTEDD--GRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFL-L 203 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~-~~~~~~--g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~-V 203 (485)
... .+....+.. ...... +..+........+...|.+.+.+.|+ +++++++|+++..++ +.+. |
T Consensus 71 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv----~i~~~~~v~~i~~~~--~~v~gv 138 (397)
T 3cgv_A 71 KGA------RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGA----DVWVKSPALGVIKEN--GKVAGA 138 (397)
T ss_dssp SEE------EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTC----EEESSCCEEEEEEET--TEEEEE
T ss_pred ceE------EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCC----EEEECCEEEEEEEeC--CEEEEE
Confidence 000 000000111 111000 00001112456788899999999999 999999999998875 5554 7
Q ss_pred EEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 204 KVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 204 ~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
.+.+ .+++.+++||.||.|+|.++ .+.+.+|.+.
T Consensus 139 ~~~~--~~~~~~~~a~~vV~A~G~~s---~~~~~~g~~~ 172 (397)
T 3cgv_A 139 KIRH--NNEIVDVRAKMVIAADGFES---EFGRWAGLKS 172 (397)
T ss_dssp EEEE--TTEEEEEEEEEEEECCCTTC---HHHHHHTCCT
T ss_pred EEEE--CCeEEEEEcCEEEECCCcch---HhHHhcCCCc
Confidence 7642 22367899999999999876 4666667654
No 43
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.19 E-value=2.6e-10 Score=127.64 Aligned_cols=185 Identities=17% Similarity=0.205 Sum_probs=105.1
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCCC---cceeecCCCceeccCCCCc------chHHHhhccCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKPL---SKVKISGGGRCNVTNGHCA------DKMILAGHYPRG 118 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~g---~k~~~sG~g~~n~tn~~~~------~~~~~~~~~~~~ 118 (485)
+++||+|||||++|+++|++|++ .|. +|+|||+...+ .....+ .|.+...+.... ...+++..+...
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~--~G~~~V~vlE~~~~~~~~gss~~~-~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~ 79 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVT--RGWNNITVLDQGPLNMPGGSTSHA-PGLVFQTNPSKTMASFAKYTVEKLLSLTED 79 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSCTTCCCSGGGTC-CCEECCCCSCHHHHHHHHHHHHHHHHCEET
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEeCCCCCCCcccceeC-CceeecCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 35899999999999999999999 677 99999976542 110000 111100010000 000111111100
Q ss_pred C-ccchh--hHhhcCCh------HHHHHHHHhcCCceeec-----------------CCCeeeecC--CChHHHHHHHHH
Q 011458 119 H-KEFRG--SFFSLHGP------MDTMSWFSDHGVELKTE-----------------DDGRVFPVS--DSSSSVIDCLLT 170 (485)
Q Consensus 119 ~-~~~~~--~~l~~~~~------~~~~~~~~~~Gi~~~~~-----------------~~g~~~p~~--~~a~~v~~~L~~ 170 (485)
. ..+.. .+.-..+. .+..++....|+++..- ..+.++|.. ..+..++..|.+
T Consensus 80 ~~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~ 159 (830)
T 1pj5_A 80 GVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIK 159 (830)
T ss_dssp TEESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHH
T ss_pred CCCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHH
Confidence 0 00000 00000011 12233445556543210 011223322 246788999999
Q ss_pred HHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCceecCCCcee
Q 011458 171 EAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSIVDPVPSLF 250 (485)
Q Consensus 171 ~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i~~~~p~l~ 250 (485)
.+++.|+ +|+++++|++|..++ ++.+.|.+.+ ..+.||.||+|+|.++ ..+++.+|+++ |..|.-.
T Consensus 160 ~a~~~Gv----~i~~~t~V~~i~~~~-~~v~~V~t~~------G~i~Ad~VV~AaG~~s--~~l~~~~g~~~-pl~p~~g 225 (830)
T 1pj5_A 160 RTESAGV----TYRGSTTVTGIEQSG-GRVTGVQTAD------GVIPADIVVSCAGFWG--AKIGAMIGMAV-PLLPLAH 225 (830)
T ss_dssp HHHHTTC----EEECSCCEEEEEEET-TEEEEEEETT------EEEECSEEEECCGGGH--HHHHHTTTCCC-CCEEEEE
T ss_pred HHHHcCC----EEECCceEEEEEEeC-CEEEEEEECC------cEEECCEEEECCccch--HHHHHHhCCCc-cceecee
Confidence 9999999 999999999998764 3345677764 3799999999999976 46777778764 5555433
No 44
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.19 E-value=1.8e-10 Score=114.90 Aligned_cols=146 Identities=19% Similarity=0.251 Sum_probs=95.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
..+||+|||||++|+++|+.|+++.+|.+|+|||+. .+| |.|. .+ .. .+. ....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G--------Gg~~-~~-g~--------~~~---~~~~---- 132 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG--------GGAW-LG-GQ--------LFS---AMVM---- 132 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC--------TTTT-CC-BT--------TCC---CEEE----
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC--------Cccc-cC-Cc--------cch---hhhc----
Confidence 358999999999999999999984348999999965 444 1221 00 00 000 0110
Q ss_pred hcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHH-CCCCCccEEEeCceEEEEEEcCC---------
Q 011458 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVAPSVVLQTGKVVTTASSDNA--------- 197 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~-~GV~~~~~i~~~~~V~~i~~~~~--------- 197 (485)
. .+...|++++|+++... |.++ ....+.++...|.+.+.+ .|+ ++++++.|+++..+++
T Consensus 133 -~---~~~~~~L~~~Gv~~~~~--G~~~-~~~~~~d~~~~L~~~a~~~~gV----~i~~~~~V~dLi~~~d~~~~~~~~~ 201 (344)
T 3jsk_A 133 -R---KPADVFLDEVGVPYEDE--GDYV-VVKHAALFTSTVLSKVLQRPNV----KLFNATTVEDLITRKHHAESSSSSD 201 (344)
T ss_dssp -E---TTTHHHHHHHTCCCEEC--SSEE-EESCHHHHHHHHHHHHHTCTTE----EEEETEEEEEEEEEEC---------
T ss_pred -c---hHHHHHHHHcCCccccc--CCeE-EEecHHHHHHHHHHHHHhCCCC----EEEeCCEEEEEEecCCccccccccc
Confidence 1 12357788889887643 3333 234567888899998888 599 9999999999976540
Q ss_pred -------C--CeEEEEEeee---cCC------ceEEEEcCeEEEecCCCch
Q 011458 198 -------G--RKFLLKVEKR---TMN------LVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 198 -------~--~~~~V~~~~~---~~~------~~~~i~ad~VIlAtG~~~~ 230 (485)
+ ...+|.+... ..+ ...+++|+.||+|||..+.
T Consensus 202 ~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 202 DGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp -------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred ccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 1 2234444210 011 2468999999999998764
No 45
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.18 E-value=5.4e-10 Score=118.82 Aligned_cols=73 Identities=18% Similarity=0.200 Sum_probs=58.7
Q ss_pred CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCC----eEEEEEeeecCCceEEEEcCeEEEecCCCchhHHH
Q 011458 159 DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGR----KFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRL 234 (485)
Q Consensus 159 ~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~----~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~l 234 (485)
.....+...|.+.+++.|+ +++++++|++++.++ + .+.+.+.+ .++..+++||.||.|+|+.+ .+
T Consensus 117 i~~~~l~~~L~~~a~~~gv----~i~~~~~v~~i~~~~--~~~~~~v~v~~~~--~~~~~~i~a~~vV~AdG~~S---~v 185 (535)
T 3ihg_A 117 LSQDKLEPILLAQARKHGG----AIRFGTRLLSFRQHD--DDAGAGVTARLAG--PDGEYDLRAGYLVGADGNRS---LV 185 (535)
T ss_dssp CCHHHHHHHHHHHHHHTTC----EEESSCEEEEEEEEC--GGGCSEEEEEEEE--TTEEEEEEEEEEEECCCTTC---HH
T ss_pred cCHHHHHHHHHHHHHhCCC----EEEeCCEEEEEEECC--CCccccEEEEEEc--CCCeEEEEeCEEEECCCCcc---hH
Confidence 3467788899999999999 999999999998875 4 67777764 11137899999999999986 56
Q ss_pred HHHCCCce
Q 011458 235 AAQLGHSI 242 (485)
Q Consensus 235 a~~~G~~i 242 (485)
.+.+|++.
T Consensus 186 R~~lgi~~ 193 (535)
T 3ihg_A 186 RESLGIGR 193 (535)
T ss_dssp HHHTTCCE
T ss_pred HHHcCCCc
Confidence 77888764
No 46
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.17 E-value=5e-10 Score=118.20 Aligned_cols=165 Identities=17% Similarity=0.154 Sum_probs=96.2
Q ss_pred CCCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhh
Q 011458 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGS 125 (485)
Q Consensus 47 ~~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~ 125 (485)
..+++||+|||||++|+++|+.|++ .|.+|+|||+. .+.. .+++...+.. ..+.++.+.-. ..+...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~~~------~~r~~~l~~~---~~~~l~~lGl~-~~~~~~ 75 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL--AGVEVVVLERLVERTG------ESRGLGFTAR---TMEVFDQRGIL-PRFGEV 75 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCCC-CC------CCCSEEECHH---HHHHHHTTTCG-GGGCSC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCC------CCCcceECHH---HHHHHHHCCCH-HHHHhc
Confidence 3457899999999999999999999 78999999965 3321 1222212211 11222222100 000000
Q ss_pred HhhcCChHHHHHHHHhcCCceeecC--CCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEE
Q 011458 126 FFSLHGPMDTMSWFSDHGVELKTED--DGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLL 203 (485)
Q Consensus 126 ~l~~~~~~~~~~~~~~~Gi~~~~~~--~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V 203 (485)
..... ..+ .++.+.... ....+........+.+.|.+.+.+.|+ +|+++++|++++.++ +.+.|
T Consensus 76 --~~~~~---~~~---~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv----~v~~~~~v~~i~~~~--~~v~v 141 (500)
T 2qa1_A 76 --ETSTQ---GHF---GGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGA----DIRRGHEVLSLTDDG--AGVTV 141 (500)
T ss_dssp --CBCCE---EEE---TTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTC----EEEETCEEEEEEEET--TEEEE
T ss_pred --ccccc---ccc---cceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCC----EEECCcEEEEEEEcC--CeEEE
Confidence 00000 000 011111100 000010112346788889999999999 999999999998875 56777
Q ss_pred EEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 204 KVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 204 ~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
++.+ .. +..+++||.||.|+|+.+ .+.+.+|++.
T Consensus 142 ~~~~-~~-g~~~~~a~~vVgADG~~S---~VR~~lg~~~ 175 (500)
T 2qa1_A 142 EVRG-PE-GKHTLRAAYLVGCDGGRS---SVRKAAGFDF 175 (500)
T ss_dssp EEEE-TT-EEEEEEESEEEECCCTTC---HHHHHTTCCC
T ss_pred EEEc-CC-CCEEEEeCEEEECCCcch---HHHHHcCCCc
Confidence 7764 11 124799999999999986 3566677654
No 47
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.17 E-value=1.8e-10 Score=123.46 Aligned_cols=167 Identities=16% Similarity=0.120 Sum_probs=93.7
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
.+++||+|||||++|+++|+.|++ .|.+|+|||+...... .++....+. ...++++.+. +...+.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~--~G~~V~VlEr~~~~~~-----~~r~~~l~~---~s~~~l~~lG-----l~~~l~ 111 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRA--GGVGALVLEKLVEPVG-----HDRAGALHI---RTVETLDLRG-----LLDRFL 111 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHH--TTCCEEEEBSCSSCCC-----SSSCCCBCH---HHHHHHHTTT-----CHHHHT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEcCCCCCCC-----CceEEEECH---HHHHHHHHcC-----ChHHHH
Confidence 356899999999999999999999 6899999996532210 111110110 1111222111 000000
Q ss_pred hcCChHHHHHHHHhc---CCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEE
Q 011458 128 SLHGPMDTMSWFSDH---GVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLK 204 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~---Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~ 204 (485)
..-.... ...+... .+..........+........+...|.+.+.+.|+ +|+++++|++++.++ +.+.|+
T Consensus 112 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv----~i~~~~~v~~l~~~~--~~v~v~ 184 (570)
T 3fmw_A 112 EGTQVAK-GLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGA----EIPRGHEVTRLRQDA--EAVEVT 184 (570)
T ss_dssp TSCCBCS-BCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTE----ECCBSCEEEECCBCS--SCEEEE
T ss_pred hcCcccC-CceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCC----EEEeCCEEEEEEEcC--CeEEEE
Confidence 0000000 0000000 00010000111122234567888999999998999 999999999998765 556677
Q ss_pred EeeecCCce-EEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 205 VEKRTMNLV-ECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 205 ~~~~~~~~~-~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+.+ . .+ .+++||.||.|+|+.+ .+.+.+|+..
T Consensus 185 ~~~--~-~G~~~~~a~~vV~ADG~~S---~vR~~lGi~~ 217 (570)
T 3fmw_A 185 VAG--P-SGPYPVRARYGVGCDGGRS---TVRRLAADRF 217 (570)
T ss_dssp EEE--T-TEEEEEEESEEEECSCSSC---HHHHHTTCCC
T ss_pred EEe--C-CCcEEEEeCEEEEcCCCCc---hHHHHcCCCC
Confidence 632 1 14 6899999999999886 4666777664
No 48
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.17 E-value=3.1e-10 Score=120.16 Aligned_cols=156 Identities=19% Similarity=0.209 Sum_probs=90.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
.++||+|||||++|+++|+.|++ .|.+|+|||+....+. +.|.. +.. . ....+...+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~--~G~~V~liE~~~~~~~----~~g~~-~~~-~--~~~~~l~~l------------- 62 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM--RGHRVLLLEREAFPRH----QIGES-LLP-A--TVHGICAML------------- 62 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCSSCC----CSCCB-CCH-H--HHTTHHHHT-------------
T ss_pred ccCCEEEECcCHHHHHHHHHHHh--CCCCEEEEccCCCCCC----CCCcc-cCc-c--hHHHHHHHh-------------
Confidence 35899999999999999999999 6899999997653320 00110 000 0 000011110
Q ss_pred cCChHHHHHHHHhcCCcee-----------------e--c-CCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCce
Q 011458 129 LHGPMDTMSWFSDHGVELK-----------------T--E-DDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKV 188 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~-----------------~--~-~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~ 188 (485)
... +.+...+.... . . .....+........+...|.+.+++.|| +++++++
T Consensus 63 --gl~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv----~i~~~~~ 133 (512)
T 3e1t_A 63 --GLT---DEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGV----DVRERHE 133 (512)
T ss_dssp --TCH---HHHHTTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTC----EEESSCE
T ss_pred --CcH---HHHHHcCCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCC----EEEcCCE
Confidence 000 00111111100 0 0 0001111224567888999999999999 9999999
Q ss_pred EEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCc
Q 011458 189 VTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 241 (485)
Q Consensus 189 V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~ 241 (485)
|+++..++ +....|.+.. .++...+++||.||.|+|..+. +.+.+|.+
T Consensus 134 V~~v~~~~-~~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~---vr~~lg~~ 181 (512)
T 3e1t_A 134 VIDVLFEG-ERAVGVRYRN-TEGVELMAHARFIVDASGNRTR---VSQAVGER 181 (512)
T ss_dssp EEEEEEET-TEEEEEEEEC-SSSCEEEEEEEEEEECCCTTCS---SGGGTCCE
T ss_pred EEEEEEEC-CEEEEEEEEe-CCCCEEEEEcCEEEECCCcchH---HHHHcCCC
Confidence 99998875 3333455542 1222358999999999998763 33444543
No 49
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.16 E-value=5.1e-10 Score=118.12 Aligned_cols=163 Identities=17% Similarity=0.186 Sum_probs=95.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
+++||+|||||++|+++|+.|++ .|.+|+|||+. .+.. .+++...+.. ..++++.+.-. ..+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~~~------~~r~~~l~~~---~~~~l~~lGl~-~~~~---- 74 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL--GGVDVMVLEQLPQRTG------ESRGLGFTAR---TMEVFDQRGIL-PAFG---- 74 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCSSCCC------CCCSEEECHH---HHHHHHHTTCG-GGGC----
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCC------CCceeEECHH---HHHHHHHCCCH-HHHH----
Confidence 46899999999999999999999 78999999965 3321 1222212111 11222222100 0000
Q ss_pred hcCChHHHHHHHHhcCCceeec--CCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEE
Q 011458 128 SLHGPMDTMSWFSDHGVELKTE--DDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKV 205 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~--~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~ 205 (485)
.. .+.+...+ .++.+... .....+........+.+.|.+.+.+.|+ +|+++++|++++.++ +.+.|++
T Consensus 75 ~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv----~v~~~~~v~~i~~~~--~~v~v~~ 144 (499)
T 2qa2_A 75 PV-ETSTQGHF---GGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGA----ELLRGHTVRALTDEG--DHVVVEV 144 (499)
T ss_dssp SC-CEESEEEE---TTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC----EEEESCEEEEEEECS--SCEEEEE
T ss_pred hc-ccccccee---cceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCC----EEEcCCEEEEEEEeC--CEEEEEE
Confidence 00 00000000 01111111 0011111122356788899999999999 999999999998875 4577777
Q ss_pred eeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 206 EKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 206 ~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
.+ ..+ ..+++||.||.|+|+.+ .+.+.+|++.
T Consensus 145 ~~-~~g-~~~~~a~~vVgADG~~S---~VR~~lg~~~ 176 (499)
T 2qa2_A 145 EG-PDG-PRSLTTRYVVGCDGGRS---TVRKAAGFDF 176 (499)
T ss_dssp EC-SSC-EEEEEEEEEEECCCTTC---HHHHHTTCCC
T ss_pred Ec-CCC-cEEEEeCEEEEccCccc---HHHHHcCCCC
Confidence 64 111 34799999999999986 3566677654
No 50
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.16 E-value=7.4e-11 Score=120.42 Aligned_cols=106 Identities=20% Similarity=0.203 Sum_probs=68.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
+.+|+|||||+||++||..|+. ++.+|+|+|+.. .+ ..++. +. ..+.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~--~~~~itlie~~~~~~-------y~~~~----------------------l~-~~l~ 56 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALG--KCDDITMINSEKYLP-------YYRPR----------------------LN-EIIA 56 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTT--TCSCEEEECSSSSCC-------BCGGG----------------------HH-HHHH
T ss_pred CCCEEEEcCcHHHHHHHHHHhC--CCCEEEEEECCCCCC-------cccCh----------------------hh-HHHc
Confidence 4579999999999999999955 789999999653 22 00110 10 0000
Q ss_pred c-CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEee
Q 011458 129 L-HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEK 207 (485)
Q Consensus 129 ~-~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 207 (485)
. .... .++ ....+.+++.++ +++++++|++|+.+. . .|.+.+
T Consensus 57 g~~~~~-------------------~l~----------~~~~~~~~~~~i----~~~~~~~V~~id~~~--~--~v~~~~ 99 (385)
T 3klj_A 57 KNKSID-------------------DIL----------IKKNDWYEKNNI----KVITSEFATSIDPNN--K--LVTLKS 99 (385)
T ss_dssp SCCCGG-------------------GTB----------SSCHHHHHHTTC----EEECSCCEEEEETTT--T--EEEETT
T ss_pred CCCCHH-------------------Hcc----------CCCHHHHHHCCC----EEEeCCEEEEEECCC--C--EEEECC
Confidence 0 0000 000 011123456789 999999999998653 3 456654
Q ss_pred ecCCceEEEEcCeEEEecCCCc
Q 011458 208 RTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+.++.+|+||+|||+.+
T Consensus 100 -----g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 100 -----GEKIKYEKLIIASGSIA 116 (385)
T ss_dssp -----SCEEECSEEEECCCEEE
T ss_pred -----CCEEECCEEEEecCCCc
Confidence 57899999999999854
No 51
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.15 E-value=5.6e-11 Score=123.42 Aligned_cols=69 Identities=22% Similarity=0.264 Sum_probs=54.8
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEE---------------cCCCCeEEEEEeeecCCceEEE--EcCeEE
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASS---------------DNAGRKFLLKVEKRTMNLVECI--EADYLL 222 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~---------------~~~~~~~~V~~~~~~~~~~~~i--~ad~VI 222 (485)
....+...|.+.+++.|+ +|+++++|++|.. ++ ++.+.|.+.+ + ++ .||.||
T Consensus 179 ~~~~l~~~L~~~~~~~Gv----~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~~v~~V~t~~-----g-~i~~~Ad~VV 247 (448)
T 3axb_A 179 DAEKVVDYYYRRASGAGV----EFIFGRRVVGVELKPRVELGIEGEPLPWQE-ARASAAVLSD-----G-TRVEVGEKLV 247 (448)
T ss_dssp CHHHHHHHHHHHHHHTTC----EEEESCCEEEEEEEESSCCCCTTSSCTTSC-EEEEEEEETT-----S-CEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCC----EEEcCCeEEEEEecccccccccccccccCC-CceEEEEeCC-----C-EEeecCCEEE
Confidence 467889999999999999 9999999999987 43 2335677654 3 68 999999
Q ss_pred EecCCCchhHHHHHHCCCc
Q 011458 223 IASGSSQQGHRLAAQLGHS 241 (485)
Q Consensus 223 lAtG~~~~g~~la~~~G~~ 241 (485)
+|+|++. ..++..+|..
T Consensus 248 ~AtG~~s--~~l~~~~g~~ 264 (448)
T 3axb_A 248 VAAGVWS--NRLLNPLGID 264 (448)
T ss_dssp ECCGGGH--HHHHGGGTCC
T ss_pred ECCCcCH--HHHHHHcCCC
Confidence 9999875 3577777754
No 52
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.12 E-value=2.7e-11 Score=124.24 Aligned_cols=147 Identities=19% Similarity=0.200 Sum_probs=83.9
Q ss_pred CCCCCCCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccc
Q 011458 43 PLTHTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEF 122 (485)
Q Consensus 43 ~~~~~~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~ 122 (485)
+++...+.+||+|||||++|+++|+.|++ .|.+|+|||+....+. .|.+ ..+.. .....++.+
T Consensus 16 ~~~~~~~~~dV~IVGaG~aGl~~A~~La~--~G~~V~v~E~~~~~~~---~~~~-~~l~~----~~~~~l~~l------- 78 (407)
T 3rp8_A 16 ENLYFQGHMKAIVIGAGIGGLSAAVALKQ--SGIDCDVYEAVKEIKP---VGAA-ISVWP----NGVKCMAHL------- 78 (407)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSCC-------CE-EEECH----HHHHHHHHT-------
T ss_pred CcccCCCCCEEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCC---cCee-EEECH----HHHHHHHHC-------
Confidence 34444557999999999999999999999 6899999996532210 0110 11110 000111111
Q ss_pred hhhHhhcCChHHHHHHHHhcCCc-----eeecCCCee---ee------------cCCChHHHHHHHHHHHHHCCCCCccE
Q 011458 123 RGSFFSLHGPMDTMSWFSDHGVE-----LKTEDDGRV---FP------------VSDSSSSVIDCLLTEAKHRGVAPSVV 182 (485)
Q Consensus 123 ~~~~l~~~~~~~~~~~~~~~Gi~-----~~~~~~g~~---~p------------~~~~a~~v~~~L~~~l~~~GV~~~~~ 182 (485)
+.. +.+...+.+ +.....|.. ++ .......+.+.|.+.+.+ + +
T Consensus 79 --------g~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~----~ 141 (407)
T 3rp8_A 79 --------GMG---DIMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--D----S 141 (407)
T ss_dssp --------TCH---HHHHHHSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--G----G
T ss_pred --------CCH---HHHHhhcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--C----E
Confidence 000 000011100 000000100 00 011346677888888876 7 8
Q ss_pred EEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCch
Q 011458 183 LQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 183 i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
|+++++|++++.++ +.+.|++.+ +.++.||.||.|+|..+.
T Consensus 142 i~~~~~v~~i~~~~--~~v~v~~~~-----g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 142 VQFGKRVTRCEEDA--DGVTVWFTD-----GSSASGDLLIAADGSHSA 182 (407)
T ss_dssp EEESCCEEEEEEET--TEEEEEETT-----SCEEEESEEEECCCTTCS
T ss_pred EEECCEEEEEEecC--CcEEEEEcC-----CCEEeeCEEEECCCcChH
Confidence 99999999999875 678888775 568999999999998764
No 53
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.10 E-value=6.2e-10 Score=110.32 Aligned_cols=144 Identities=17% Similarity=0.218 Sum_probs=94.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
.+||+|||||++|+++|+.|++.++|++|+|+|+. .+|. +.+ . . . . .+. ....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg-------g~~-~-~-g--~------~~~---~~~~----- 118 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG-------GSW-L-G-G--Q------LFS---AMVM----- 118 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT-------TTT-C-C-G--G------GCC---CEEE-----
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc-------ccc-c-c-C--c------ccc---hhhh-----
Confidence 46999999999999999999984348999999965 4442 111 0 0 0 0 010 0010
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHC-CCCCccEEEeCceEEEEEEcC--C-C--CeEE
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHR-GVAPSVVLQTGKVVTTASSDN--A-G--RKFL 202 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~-GV~~~~~i~~~~~V~~i~~~~--~-~--~~~~ 202 (485)
. .+...|+.+.|+++... +.++. ...+..+...|.+.+.+. |+ +++.+++|+++..++ + + ...+
T Consensus 119 ~---~~~~~~L~~~Gv~~~~~--g~~~~-~~~~~~~~~~L~~~a~~~~GV----~i~~~~~V~~Ll~~~~~~~g~~rV~G 188 (326)
T 2gjc_A 119 R---KPAHLFLQELEIPYEDE--GDYVV-VKHAALFISTVLSKVLQLPNV----KLFNATCVEDLVTRPPTEKGEVTVAG 188 (326)
T ss_dssp E---TTTHHHHHHTTCCCEEC--SSEEE-ESCHHHHHHHHHHHHHTSTTE----EEETTEEEEEEEECCCC-----CEEE
T ss_pred h---hHHHHHHHhhCcccccC--CCeEE-EcchHHHHHHHHHHHHHhcCc----EEEecceeeeeeecccccCCCcEEEE
Confidence 0 23357788889887654 33332 335678888999988885 89 999999999998762 1 1 3345
Q ss_pred EEEeee---cC------CceEEEEc---------------CeEEEecCCCc
Q 011458 203 LKVEKR---TM------NLVECIEA---------------DYLLIASGSSQ 229 (485)
Q Consensus 203 V~~~~~---~~------~~~~~i~a---------------d~VIlAtG~~~ 229 (485)
|.+... .+ .....+.| |.||.|||..+
T Consensus 189 Vvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 189 VVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp EEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred EEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 554310 00 12467999 99999999765
No 54
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.09 E-value=4e-10 Score=110.83 Aligned_cols=112 Identities=17% Similarity=0.235 Sum_probs=80.2
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
+++||+|||||++|+++|++|++ .|++|+|+|+. +| |.+..... ...++. +
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~-~g--------g~~~~~~~--------~~~~~~----~------ 64 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSAR--YMLKTLVIGET-PG--------GQLTEAGI--------VDDYLG----L------ 64 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-TT--------GGGGGCCE--------ECCSTT----S------
T ss_pred CccCEEEECccHHHHHHHHHHHH--CCCcEEEEecc-CC--------Ceeccccc--------ccccCC----C------
Confidence 35899999999999999999999 68999999977 55 33322110 000100 0
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
. . .....+.+.+.+.+++.|+ ++++ ++|+++..++ +.+.|.+.+
T Consensus 65 --~---------------------~-----~~~~~~~~~~~~~~~~~~v----~~~~-~~v~~i~~~~--~~~~v~~~~- 108 (323)
T 3f8d_A 65 --I---------------------E-----IQASDMIKVFNKHIEKYEV----PVLL-DIVEKIENRG--DEFVVKTKR- 108 (323)
T ss_dssp --T---------------------T-----EEHHHHHHHHHHHHHTTTC----CEEE-SCEEEEEEC----CEEEEESS-
T ss_pred --C---------------------C-----CCHHHHHHHHHHHHHHcCC----EEEE-EEEEEEEecC--CEEEEEECC-
Confidence 0 0 1135566777788888899 9999 8999998764 568888765
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..+.+|.||+|||+.+
T Consensus 109 ----g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 109 ----KGEFKADSVILGIGVKR 125 (323)
T ss_dssp ----SCEEEEEEEEECCCCEE
T ss_pred ----CCEEEcCEEEECcCCCC
Confidence 57899999999999854
No 55
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.08 E-value=2.3e-09 Score=110.16 Aligned_cols=63 Identities=22% Similarity=0.262 Sum_probs=50.5
Q ss_pred eeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeE-EEEEeeecCCceEEEEcCeEEEecCCC
Q 011458 153 RVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKF-LLKVEKRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 153 ~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~-~V~~~~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
..+|. .....+.+.|.+.+++.|+ +|+++++|++|..++ +.+ .|.++ ++++.||.||+|+|..
T Consensus 188 ~~~~~-gG~~~l~~~l~~~~~~~G~----~i~~~~~V~~i~~~~--~~~~gv~~~------g~~~~ad~VV~a~~~~ 251 (425)
T 3ka7_A 188 TGIPE-GGCKGIIDALETVISANGG----KIHTGQEVSKILIEN--GKAAGIIAD------DRIHDADLVISNLGHA 251 (425)
T ss_dssp CEEET-TSHHHHHHHHHHHHHHTTC----EEECSCCEEEEEEET--TEEEEEEET------TEEEECSEEEECSCHH
T ss_pred ccccC-CCHHHHHHHHHHHHHHcCC----EEEECCceeEEEEEC--CEEEEEEEC------CEEEECCEEEECCCHH
Confidence 34443 3357789999999999999 999999999999875 445 46664 5689999999999964
No 56
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.08 E-value=2.4e-09 Score=114.80 Aligned_cols=75 Identities=12% Similarity=0.037 Sum_probs=55.3
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCC
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLG 239 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G 239 (485)
....++..+.+.+.+.|+ +|+++++|+++..++ +..++|.+.+...+++..+.||.||+|||.+.. .++...|
T Consensus 186 ~~~~l~~~l~~~a~~~Ga----~i~~~t~V~~l~~~~-~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~--~l~~~~g 258 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGA----YLVSKMKAVGFLYEG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD--KVRNLNF 258 (571)
T ss_dssp CHHHHHHHHHHHHHHTTC----EEESSEEEEEEEEET-TEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH--HHHTTCC
T ss_pred chHHHHHHHHHHHHHcCC----eEEeccEEEEEEEeC-CEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH--HHHHhhc
Confidence 456778888889999999 999999999998875 445667764311233457999999999998763 4555555
Q ss_pred Cc
Q 011458 240 HS 241 (485)
Q Consensus 240 ~~ 241 (485)
..
T Consensus 259 ~~ 260 (571)
T 2rgh_A 259 TR 260 (571)
T ss_dssp SS
T ss_pred cC
Confidence 43
No 57
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.07 E-value=5.2e-10 Score=109.91 Aligned_cols=112 Identities=24% Similarity=0.354 Sum_probs=79.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
+||+|||||++|+++|+.|++ .|. +|+|+|++.+| |.|..... . ..|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~--~g~~~v~lie~~~~g--------g~~~~~~~--~------~~~~~------------ 51 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR--GGVKNAVLFEKGMPG--------GQITGSSE--I------ENYPG------------ 51 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCSSEEEECSSSTT--------CGGGGCSC--B------CCSTT------------
T ss_pred ceEEEECccHHHHHHHHHHHH--CCCCcEEEEcCCCCC--------cccccccc--c------ccCCC------------
Confidence 699999999999999999999 688 99999986554 33321110 0 00100
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+|.......+.+.+.+.+.+.|+ +++. ++|+++..++ +.+.|.+.+
T Consensus 52 -------------------------~~~~~~~~~~~~~l~~~~~~~~v----~~~~-~~v~~i~~~~--~~~~v~~~~-- 97 (311)
T 2q0l_A 52 -------------------------VKEVVSGLDFMQPWQEQCFRFGL----KHEM-TAVQRVSKKD--SHFVILAED-- 97 (311)
T ss_dssp -------------------------CCSCBCHHHHHHHHHHHHHTTSC----EEEC-SCEEEEEEET--TEEEEEETT--
T ss_pred -------------------------CcccCCHHHHHHHHHHHHHHcCC----EEEE-EEEEEEEEcC--CEEEEEEcC--
Confidence 00011235566777777888899 9988 7899998764 567777654
Q ss_pred CCceEEEEcCeEEEecCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..+.+|.||+|||+.+
T Consensus 98 ---g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 98 ---GKTFEAKSVIIATGGSP 114 (311)
T ss_dssp ---SCEEEEEEEEECCCEEE
T ss_pred ---CCEEECCEEEECCCCCC
Confidence 56799999999999754
No 58
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.07 E-value=2.6e-09 Score=112.65 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=55.0
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHH-C
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQ-L 238 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~-~ 238 (485)
+...++..|.+.+.+.|+ +++++++|+++..++ +.+.|.+.+...+....++||.||+|+|.+.. .++.. +
T Consensus 147 ~~~~l~~~l~~~a~~~Gv----~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~--~l~~~~l 218 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGG----EVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK--QFFDDGM 218 (501)
T ss_dssp CHHHHHHHHHHHHHHTTC----EEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHH--HHHHHHT
T ss_pred cHHHHHHHHHHHHHHcCC----EEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHH--HHHHHhc
Confidence 467788999999999999 999999999998864 67788774211222347999999999998863 45553 4
Q ss_pred C
Q 011458 239 G 239 (485)
Q Consensus 239 G 239 (485)
+
T Consensus 219 ~ 219 (501)
T 2qcu_A 219 H 219 (501)
T ss_dssp C
T ss_pred c
Confidence 4
No 59
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.07 E-value=6e-10 Score=111.36 Aligned_cols=148 Identities=16% Similarity=0.213 Sum_probs=83.2
Q ss_pred CcEEEECcchHHHHHHHHHhc-cCCCCcEEEEeCC-CCCcceeec---CCCceeccCCCCcchHHHhhccCCCCccchhh
Q 011458 51 ELLVVVGGGAAGVYGAIRAKT-VAPKLNVVIIEKG-KPLSKVKIS---GGGRCNVTNGHCADKMILAGHYPRGHKEFRGS 125 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~-~~~g~~V~llE~~-~~g~k~~~s---G~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~ 125 (485)
+||+|||||++|+++|+.|++ ...|.+|+|+|+. .+|+..... ++..+.+... ..|......+..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g---------~~~~~~~~~~~~- 71 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLG---------AQYITCTPHYAK- 71 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESS---------CCCEEECSSHHH-
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecC---------CceEEcCchHHH-
Confidence 589999999999999999998 2247899999965 454321100 0000100000 000000000000
Q ss_pred HhhcCChHHHHHHHHhcCCceee---------cCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcC
Q 011458 126 FFSLHGPMDTMSWFSDHGVELKT---------EDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDN 196 (485)
Q Consensus 126 ~l~~~~~~~~~~~~~~~Gi~~~~---------~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~ 196 (485)
.+ .+..+.+...|+.... ......|........+.+.|.+.+ |+ +|+++++|++|..++
T Consensus 72 ---~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~---g~----~i~~~~~V~~i~~~~ 139 (342)
T 3qj4_A 72 ---KH--QRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKES---GA----EVYFRHRVTQINLRD 139 (342)
T ss_dssp ---HT--HHHHHHHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHH---TC----EEESSCCEEEEEECS
T ss_pred ---HH--HHHHHHHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhc---CC----EEEeCCEEEEEEEcC
Confidence 00 1112222222332111 011223333444566677766554 88 999999999999875
Q ss_pred CCCeEEEEEeeecCCceEEEEcCeEEEecCC
Q 011458 197 AGRKFLLKVEKRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 197 ~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 227 (485)
+.|.|.+.+ +..+.+|.||+|+..
T Consensus 140 --~~~~v~~~~-----g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 140 --DKWEVSKQT-----GSPEQFDLIVLTMPV 163 (342)
T ss_dssp --SSEEEEESS-----SCCEEESEEEECSCH
T ss_pred --CEEEEEECC-----CCEEEcCEEEECCCH
Confidence 568888765 556899999999974
No 60
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.07 E-value=8.4e-10 Score=112.77 Aligned_cols=154 Identities=18% Similarity=0.280 Sum_probs=82.9
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
.+.+||+|||||++|+++|+.|++ .|.+|+|||+. .++.+. . ++.+.+.... ....++... +...+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~~~--~-g~~~~~~~~~---~~~~l~~~g-----l~~~~ 90 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ--NGIDVSVYERDNDREARI--F-GGTLDLHKGS---GQEAMKKAG-----LLQTY 90 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT--TTCEEEEEECSSSTTCCC--C-SCCEECCTTT---HHHHHHHTT-----CHHHH
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCccccc--c-CCeeeeCCcc---HHHHHHhcC-----hHHHH
Confidence 346899999999999999999999 68999999965 333211 1 2223222100 001111110 00000
Q ss_pred hhcCChHHHHHHHHhcCCceeec----CCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEE
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTE----DDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFL 202 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~----~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~ 202 (485)
.....+... .++...|...... .....+| ......+.+.|.+.+. ++ +++++++|++++.++ +.+.
T Consensus 91 ~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~i~r~~l~~~L~~~~~--~~----~i~~~~~v~~i~~~~--~~v~ 160 (398)
T 2xdo_A 91 YDLALPMGV-NIADEKGNILSTKNVKPENRFDNP-EINRNDLRAILLNSLE--ND----TVIWDRKLVMLEPGK--KKWT 160 (398)
T ss_dssp HHHCBCCCE-EEECSSSEEEEECCCGGGTTSSCC-EECHHHHHHHHHHTSC--TT----SEEESCCEEEEEECS--SSEE
T ss_pred HHhhcccce-EEECCCCCchhhccccccCCCCCc-eECHHHHHHHHHhhcC--CC----EEEECCEEEEEEECC--CEEE
Confidence 000000000 0000001000000 0000011 1234556667766654 36 899999999998775 5577
Q ss_pred EEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 203 LKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 203 V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
|++.+ +.+++||.||.|+|..+
T Consensus 161 v~~~~-----g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 161 LTFEN-----KPSETADLVILANGGMS 182 (398)
T ss_dssp EEETT-----SCCEEESEEEECSCTTC
T ss_pred EEECC-----CcEEecCEEEECCCcch
Confidence 87765 56799999999999865
No 61
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.07 E-value=1.8e-09 Score=111.00 Aligned_cols=63 Identities=19% Similarity=0.112 Sum_probs=50.4
Q ss_pred CeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCC
Q 011458 152 GRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 152 g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
+..+|.. ....+.+.|.+.+++.|+ +|+++++|++|..++ +.+ |.++ ++.+.||.||+|+|..
T Consensus 180 g~~~~~g-G~~~l~~~l~~~~~~~G~----~i~~~~~V~~i~~~~--~~v-V~~~------g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 180 GPGLIRG-GCKAVIDELERIIMENKG----KILTRKEVVEINIEE--KKV-YTRD------NEEYSFDVAISNVGVR 242 (421)
T ss_dssp SCEEETT-CHHHHHHHHHHHHHTTTC----EEESSCCEEEEETTT--TEE-EETT------CCEEECSEEEECSCHH
T ss_pred CcceecC-CHHHHHHHHHHHHHHCCC----EEEcCCeEEEEEEEC--CEE-EEeC------CcEEEeCEEEECCCHH
Confidence 4455533 367889999999999999 999999999998764 566 5433 5689999999999964
No 62
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.06 E-value=8.1e-10 Score=112.74 Aligned_cols=70 Identities=11% Similarity=0.099 Sum_probs=55.6
Q ss_pred CChHHHHHHHHHHHHHC-CCCCccEEEeCceEEEEEEcCCCCeE--EEEEeeecCCceEEEEcCeEEEecCCCchhHHHH
Q 011458 159 DSSSSVIDCLLTEAKHR-GVAPSVVLQTGKVVTTASSDNAGRKF--LLKVEKRTMNLVECIEADYLLIASGSSQQGHRLA 235 (485)
Q Consensus 159 ~~a~~v~~~L~~~l~~~-GV~~~~~i~~~~~V~~i~~~~~~~~~--~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la 235 (485)
.....+.+.|.+.+++. |+ +++++++|++++.++ +.+ .|++.+ +..++||.||+|+|..+. +.
T Consensus 104 ~~r~~l~~~L~~~~~~~~gv----~i~~~~~v~~i~~~~--~~v~g~v~~~~-----g~~~~ad~vV~AdG~~s~---vr 169 (399)
T 2x3n_A 104 MPCESLRRLVLEKIDGEATV----EMLFETRIEAVQRDE--RHAIDQVRLND-----GRVLRPRVVVGADGIASY---VR 169 (399)
T ss_dssp CCHHHHHHHHHHHHTTCTTE----EEECSCCEEEEEECT--TSCEEEEEETT-----SCEEEEEEEEECCCTTCH---HH
T ss_pred ccHHHHHHHHHHHhhhcCCc----EEEcCCEEEEEEEcC--CceEEEEEECC-----CCEEECCEEEECCCCChH---HH
Confidence 34577888999999988 89 999999999998875 445 777764 558999999999998873 55
Q ss_pred HHCCCce
Q 011458 236 AQLGHSI 242 (485)
Q Consensus 236 ~~~G~~i 242 (485)
+.+|.+.
T Consensus 170 ~~lg~~~ 176 (399)
T 2x3n_A 170 RRLLDID 176 (399)
T ss_dssp HHTSCCC
T ss_pred HHhCCCc
Confidence 6677654
No 63
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.05 E-value=8e-10 Score=109.39 Aligned_cols=115 Identities=22% Similarity=0.338 Sum_probs=80.0
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
..+||+|||||++|+++|+.|++ .|.+|+|+|+..+| |.|..... . ..|+. +
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~g--------g~~~~~~~--~------~~~~~----~------ 58 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGR--AQLSTLILEKGMPG--------GQIAWSEE--V------ENFPG----F------ 58 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT--------GGGGGCSC--B------CCSTT----C------
T ss_pred ccCCEEEECCCHHHHHHHHHHHH--cCCcEEEEeCCCCC--------cccccccc--c------ccCCC----C------
Confidence 35799999999999999999999 68999999976554 34422110 0 00100 0
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEc--CCCCeEEEEEe
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSD--NAGRKFLLKVE 206 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~--~~~~~~~V~~~ 206 (485)
|.......+.+.+.+.+++.|+ +++. .+|+++..+ + +..+.|.+.
T Consensus 59 ---------------------------~~~~~~~~~~~~l~~~~~~~gv----~~~~-~~v~~i~~~~~~-~~~~~v~~~ 105 (325)
T 2q7v_A 59 ---------------------------PEPIAGMELAQRMHQQAEKFGA----KVEM-DEVQGVQHDATS-HPYPFTVRG 105 (325)
T ss_dssp ---------------------------SSCBCHHHHHHHHHHHHHHTTC----EEEE-CCEEEEEECTTS-SSCCEEEEE
T ss_pred ---------------------------CCCCCHHHHHHHHHHHHHHcCC----EEEe-eeEEEEEeccCC-CceEEEEEC
Confidence 0001234566677778888999 9987 589999875 3 222667666
Q ss_pred eecCCceEEEEcCeEEEecCCCc
Q 011458 207 KRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+ +..+.+|.||+|||+.+
T Consensus 106 ~-----g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 106 Y-----NGEYRAKAVILATGADP 123 (325)
T ss_dssp S-----SCEEEEEEEEECCCEEE
T ss_pred C-----CCEEEeCEEEECcCCCc
Confidence 4 56899999999999854
No 64
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.05 E-value=4.8e-10 Score=114.18 Aligned_cols=62 Identities=11% Similarity=0.091 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEE-eeecCCceEEEEcCeEEEecCCCch
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKV-EKRTMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~-~~~~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
...+.+.|.+.+.+.|+ +++++++|+++..++ ++.+.|++ .+ +...+++||.||.|+|..+.
T Consensus 102 ~~~l~~~L~~~~~~~g~----~i~~~~~v~~i~~~~-~~~~~v~~~~~---g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 102 QTEVTRDLMEAREACGA----TTVYQAAEVRLHDLQ-GERPYVTFERD---GERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHHHHTTC----EEESSCEEEEEECTT-SSSCEEEEEET---TEEEEEECSEEEECCCTTCS
T ss_pred hHHHHHHHHHHHHhcCC----eEEeceeEEEEEEec-CCceEEEEecC---CcEEEEEeCEEEECCCCCcH
Confidence 46677888888888999 999999999998753 34566766 33 11227999999999998763
No 65
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.05 E-value=8.6e-10 Score=115.87 Aligned_cols=96 Identities=15% Similarity=0.198 Sum_probs=66.9
Q ss_pred HHHHHHHhcCCceeec-CCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCc
Q 011458 134 DTMSWFSDHGVELKTE-DDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 212 (485)
Q Consensus 134 ~~~~~~~~~Gi~~~~~-~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 212 (485)
++...+...|.++..- ...++.| .....+.+.+.+.+++.|| +++++++|+++..++ +.+.|.+.+
T Consensus 205 e~A~~l~~~g~~Vtli~~~~~~l~--~~~~~~~~~l~~~l~~~Gv----~i~~~~~V~~i~~~~--~~v~v~~~~----- 271 (484)
T 3o0h_A 205 EFANIFHGLGVKTTLLHRGDLILR--NFDYDLRQLLNDAMVAKGI----SIIYEATVSQVQSTE--NCYNVVLTN----- 271 (484)
T ss_dssp HHHHHHHHTTCEEEEECSSSSSST--TSCHHHHHHHHHHHHHHTC----EEESSCCEEEEEECS--SSEEEEETT-----
T ss_pred HHHHHHHHcCCeEEEEECCCcccc--ccCHHHHHHHHHHHHHCCC----EEEeCCEEEEEEeeC--CEEEEEECC-----
Confidence 4556667777765532 2223333 2346778888999999999 999999999998764 456777765
Q ss_pred eEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 213 VECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 213 ~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
+.++.+|.||+|+|..+....+ ++..|+++
T Consensus 272 g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~ 302 (484)
T 3o0h_A 272 GQTICADRVMLATGRVPNTTGLGLERAGVKV 302 (484)
T ss_dssp SCEEEESEEEECCCEEECCTTCCHHHHTCCB
T ss_pred CcEEEcCEEEEeeCCCcCCCCCChhhcCceE
Confidence 5689999999999976542221 45556654
No 66
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.05 E-value=2e-10 Score=117.85 Aligned_cols=68 Identities=19% Similarity=0.198 Sum_probs=49.6
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEE---------EEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCch
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVT---------TASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~---------~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
....+...|.+.+++.|+ +++++++|+ +|..++ +.+.|.+.+ ..+.||.||+|+|.+.
T Consensus 170 ~~~~l~~~L~~~~~~~Gv----~i~~~~~v~~~~g~~~~~~i~~~~--~~v~v~~~~------g~i~a~~VV~A~G~~s- 236 (405)
T 3c4n_A 170 RPGSLALLAAQQAIGQGA----GLLLNTRAELVPGGVRLHRLTVTN--THQIVVHET------RQIRAGVIIVAAGAAG- 236 (405)
T ss_dssp CHHHHHHHHHHHHHTTTC----EEECSCEEEEETTEEEEECBCC---------CBCC------EEEEEEEEEECCGGGH-
T ss_pred cHHHHHHHHHHHHHHCCC----EEEcCCEEEeccccccccceEeeC--CeEEEEECC------cEEECCEEEECCCccH-
Confidence 356789999999999999 999999999 887654 445666653 3799999999999875
Q ss_pred hHHHHH-HCCCc
Q 011458 231 GHRLAA-QLGHS 241 (485)
Q Consensus 231 g~~la~-~~G~~ 241 (485)
..+++ .+|..
T Consensus 237 -~~l~~~~~g~~ 247 (405)
T 3c4n_A 237 -PALVEQGLGLH 247 (405)
T ss_dssp -HHHHHHHHCCC
T ss_pred -HHHHHHhcCCC
Confidence 35666 67765
No 67
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.04 E-value=1.3e-09 Score=114.48 Aligned_cols=66 Identities=9% Similarity=0.108 Sum_probs=53.5
Q ss_pred CeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCC
Q 011458 152 GRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 152 g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
|..||. .....+.++|.+.+++.|+ +|+++++|++|..++ ++..+|++.+ ++++.||.||.+++..
T Consensus 212 G~~~p~-GG~~~l~~aL~~~~~~~Gg----~I~~~~~V~~I~~~~-~~~~gV~~~~-----g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 212 GVWFPR-GGTGALVQGMIKLFQDLGG----EVVLNARVSHMETTG-NKIEAVHLED-----GRRFLTQAVASNADVV 277 (501)
T ss_dssp CEEEET-THHHHHHHHHHHHHHHTTC----EEECSCCEEEEEEET-TEEEEEEETT-----SCEEECSCEEECCC--
T ss_pred CeEEeC-CCCcchHHHHHHHHHHhCC----ceeeecceeEEEeeC-CeEEEEEecC-----CcEEEcCEEEECCCHH
Confidence 555664 3467899999999999999 999999999999886 4455688876 7899999999988753
No 68
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.04 E-value=5.2e-10 Score=110.81 Aligned_cols=124 Identities=20% Similarity=0.315 Sum_probs=81.1
Q ss_pred CCCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 47 TSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 47 ~~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
..+.+||+|||||++|+++|+.|++ .|++|+|||+..... ..-+|.+..... ...|+.
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~vie~~~~~~---~~~gg~~~~~~~--------~~~~~~--------- 76 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLAR--AEIKPILYEGMMANG---IAAGGQLTTTTE--------IENFPG--------- 76 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTT---BCTTCGGGGSSE--------ECCSTT---------
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCCC---CCcCcccccchh--------hcccCC---------
Confidence 3456899999999999999999999 689999999743100 000122211110 000100
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEe
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVE 206 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~ 206 (485)
+ |......++.+.+.+.+++.|+ ++++++ |+++..++ +.+.+.+.
T Consensus 77 ---~-------------------------~~~~~~~~~~~~~~~~~~~~gv----~i~~~~-v~~i~~~~--~~~~v~~~ 121 (338)
T 3itj_A 77 ---F-------------------------PDGLTGSELMDRMREQSTKFGT----EIITET-VSKVDLSS--KPFKLWTE 121 (338)
T ss_dssp ---C-------------------------TTCEEHHHHHHHHHHHHHHTTC----EEECSC-EEEEECSS--SSEEEEET
T ss_pred ---C-------------------------cccCCHHHHHHHHHHHHHHcCC----EEEEeE-EEEEEEcC--CEEEEEEE
Confidence 0 0011235677788888899999 999998 99998764 66777763
Q ss_pred eecCCceEEEEcCeEEEecCCCc
Q 011458 207 KRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
. .+.+..+.+|.||+|||+.+
T Consensus 122 ~--~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 122 F--NEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp T--CSSSCCEEEEEEEECCCEEE
T ss_pred e--cCCCcEEEeCEEEECcCCCc
Confidence 1 11256799999999999754
No 69
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.03 E-value=2.6e-09 Score=113.96 Aligned_cols=187 Identities=14% Similarity=0.185 Sum_probs=88.5
Q ss_pred ceecccccccccccccCCCCCCCCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCC
Q 011458 26 KYLLLTSKKRKFTTAAIPLTHTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGH 104 (485)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~ 104 (485)
++.++++++...+.. ........+||+|||||++|+++|+.|++ .|.+|+|||+. .++. .+++...+..
T Consensus 4 ~~~~~~~~~~~~~~~--~~M~~~~~~dVlIVGaGpaGl~~A~~La~--~G~~V~vlEr~~~~~~------~~~~~~l~~~ 73 (549)
T 2r0c_A 4 SHHHHHHSSGLVPRG--SHMNAPIETDVLILGGGPVGMALALDLAH--RQVGHLVVEQTDGTIT------HPRVGTIGPR 73 (549)
T ss_dssp --------------------CCCEEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCSCCS------SCCCCEECHH
T ss_pred cccccccccCccchh--hhcCCCCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCC------CCceeeeCHH
Confidence 456666665533321 22222345899999999999999999999 78999999965 3321 1222112110
Q ss_pred CcchHHHhhccCCCCccchhhHhhcCChHH-H--HHHHH-hcCCcee-ec--C-----CCeeee---cCCChHHHHHHHH
Q 011458 105 CADKMILAGHYPRGHKEFRGSFFSLHGPMD-T--MSWFS-DHGVELK-TE--D-----DGRVFP---VSDSSSSVIDCLL 169 (485)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~--~~~~~-~~Gi~~~-~~--~-----~g~~~p---~~~~a~~v~~~L~ 169 (485)
..+.++.+. +...+...-.+.+ . ..|+. ..|..+. .. . .....| .......+.+.|.
T Consensus 74 ---~~~~l~~lG-----l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~ 145 (549)
T 2r0c_A 74 ---SMELFRRWG-----VAKQIRTAGWPGDHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLA 145 (549)
T ss_dssp ---HHHHHHHTT-----CHHHHHTSSCCTTSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHH
T ss_pred ---HHHHHHHcC-----ChHHHHhhcCCcccccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHH
Confidence 011111110 0000000000000 0 00000 0011000 00 0 000011 1123456667777
Q ss_pred HHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 170 TEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 170 ~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+.+.+. |+++++|++++.++ +.+.+++.+..++...+++||.||.|+|+.+. +.+.+|++.
T Consensus 146 ~~a~~~-------v~~~~~v~~~~~~~--~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~---vR~~lg~~~ 206 (549)
T 2r0c_A 146 EAVGER-------LRTRSRLDSFEQRD--DHVRATITDLRTGATRAVHARYLVACDGASSP---TRKALGIDA 206 (549)
T ss_dssp HHHGGG-------EECSEEEEEEEECS--SCEEEEEEETTTCCEEEEEEEEEEECCCTTCH---HHHHHTCCC
T ss_pred HHHHHh-------cccCcEEEEEEEeC--CEEEEEEEECCCCCEEEEEeCEEEECCCCCcH---HHHHcCCCC
Confidence 777653 67899999998875 45667665311233368999999999999873 555666654
No 70
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.03 E-value=5.3e-10 Score=120.21 Aligned_cols=174 Identities=17% Similarity=0.190 Sum_probs=94.6
Q ss_pred CCCCcEEEECcchHHHHHHHHHhcc----CCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccc
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTV----APKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEF 122 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~----~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~ 122 (485)
++++||+|||||++|+++|+.|++. ++|.+|+|||+. .++.++. +| .+ + +.. ....++..+......+
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~-~g--~~-l-~~~--~l~~ll~~~~~~g~~~ 105 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL-SG--AC-L-DPR--AFEELFPDWKEKGAPL 105 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCC-CC--CE-E-CTH--HHHHHCTTHHHHTCCC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccc-cc--cc-c-CHH--HHHHHHHHHHhcCCce
Confidence 4568999999999999999999983 128999999965 4553321 11 11 1 100 0001111000000000
Q ss_pred hhhHhhcCChHHHHHHHHh---cCCcee----ecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEc
Q 011458 123 RGSFFSLHGPMDTMSWFSD---HGVELK----TEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSD 195 (485)
Q Consensus 123 ~~~~l~~~~~~~~~~~~~~---~Gi~~~----~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~ 195 (485)
.. .... +...|+.. ..++.. ....+ .| ......+.+.|.+.+++.|| +|+++++|+++..+
T Consensus 106 ~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~v~r~~l~~~L~~~a~~~Gv----~i~~g~~v~~l~~~ 173 (584)
T 2gmh_A 106 NT----PVTE-DRFGILTEKYRIPVPILPGLPMNNHG-NY--VVRLGHLVSWMGEQAEALGV----EVYPGYAAAEILFH 173 (584)
T ss_dssp CE----ECCE-EEEEEECSSCEEECCCCTTSTTCCTT-CE--ECCHHHHHHHHHHHHHHTTC----EEETTCCEEEEEEC
T ss_pred ee----eech-hheeeeccCCCccccccCccccccCC-CE--EEeHHHHHHHHHHHHHHcCC----EEEcCCEEEEEEEc
Confidence 00 0000 00000000 000000 00001 11 12346788899999999999 99999999999876
Q ss_pred CCCC-eEEEEEeee---cCCc-------eEEEEcCeEEEecCCCchh-HHHHHHCCCc
Q 011458 196 NAGR-KFLLKVEKR---TMNL-------VECIEADYLLIASGSSQQG-HRLAAQLGHS 241 (485)
Q Consensus 196 ~~~~-~~~V~~~~~---~~~~-------~~~i~ad~VIlAtG~~~~g-~~la~~~G~~ 241 (485)
+ ++ ..+|.+.+. .++. +.+++||.||+|+|+.+.. -.+...+|+.
T Consensus 174 ~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~ 230 (584)
T 2gmh_A 174 E-DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLR 230 (584)
T ss_dssp T-TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTT
T ss_pred C-CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCC
Confidence 4 33 445766520 0121 2579999999999998753 2445556765
No 71
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.03 E-value=2.1e-09 Score=97.10 Aligned_cols=118 Identities=24% Similarity=0.375 Sum_probs=85.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
+||+|||||++|+.+|..|++ .|.+|+|+|+.. .. ..... ...|+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~--~g~~v~lie~~~~~~-------------~~~~~------~~~~~------------- 47 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR--AGLKVLVLDGGRSKV-------------KGVSR------VPNYP------------- 47 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCTT-------------TTCSC------CCCST-------------
T ss_pred CeEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCcc-------------cCchh------hhccC-------------
Confidence 699999999999999999999 689999999653 11 00000 00000
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+ +|......++.+.+.+.+++.|+ +++++ +|++++.++ +.+.|.+++
T Consensus 48 -------------~-----------~~~~~~~~~~~~~l~~~~~~~gv----~v~~~-~v~~i~~~~--~~~~v~~~~-- 94 (180)
T 2ywl_A 48 -------------G-----------LLDEPSGEELLRRLEAHARRYGA----EVRPG-VVKGVRDMG--GVFEVETEE-- 94 (180)
T ss_dssp -------------T-----------CTTCCCHHHHHHHHHHHHHHTTC----EEEEC-CCCEEEECS--SSEEEECSS--
T ss_pred -------------C-----------CcCCCCHHHHHHHHHHHHHHcCC----EEEeC-EEEEEEEcC--CEEEEEECC--
Confidence 0 01112346777888889999999 99999 999998764 457777764
Q ss_pred CCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+ ++.+|.||+|+|..+ .+++.+|+++
T Consensus 95 ---g-~i~ad~vI~A~G~~~---~~~~~~g~~~ 120 (180)
T 2ywl_A 95 ---G-VEKAERLLLCTHKDP---TLPSLLGLTR 120 (180)
T ss_dssp ---C-EEEEEEEEECCTTCC---HHHHHHTCCE
T ss_pred ---C-EEEECEEEECCCCCC---CccccCCCCc
Confidence 4 799999999999987 3566777664
No 72
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.02 E-value=1.4e-09 Score=107.91 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=32.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (485)
++||+|||||++|+++|+.|++ .|.+|+|||+. .+|
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~--~G~~V~vlE~~~~~g 38 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC
T ss_pred CceEEEECCcHHHHHHHHHHHH--CCCcEEEEECCCCCc
Confidence 4799999999999999999999 68999999965 454
No 73
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.02 E-value=1.1e-09 Score=108.25 Aligned_cols=112 Identities=21% Similarity=0.291 Sum_probs=78.9
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
..+||+|||||++|+++|+.|++ .|.+|+|+|+..+| |.|..... . ..|+. +
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~g--------g~~~~~~~--~------~~~~~----~------ 66 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAAR--SGFSVAILDKAVAG--------GLTAEAPL--V------ENYLG----F------ 66 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSTT--------GGGGGCSC--B------CCBTT----B------
T ss_pred CCCcEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCC--------ccccccch--h------hhcCC----C------
Confidence 46899999999999999999999 68999999986555 33322110 0 00100 0
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
.......+.+.+.+.+++.|+ +++. .+|+++..++ +.+.|.++
T Consensus 67 ----------------------------~~~~~~~~~~~~~~~~~~~~v----~~~~-~~v~~i~~~~--~~~~v~~~-- 109 (319)
T 3cty_A 67 ----------------------------KSIVGSELAKLFADHAANYAK----IREG-VEVRSIKKTQ--GGFDIETN-- 109 (319)
T ss_dssp ----------------------------SSBCHHHHHHHHHHHHHTTSE----EEET-CCEEEEEEET--TEEEEEES--
T ss_pred ----------------------------cccCHHHHHHHHHHHHHHcCC----EEEE-eeEEEEEEeC--CEEEEEEC--
Confidence 001124556667777888899 9988 7899998764 56777664
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..+.+|.||+|||+.+
T Consensus 110 ----~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 110 ----DDTYHAKYVIITTGTTH 126 (319)
T ss_dssp ----SSEEEEEEEEECCCEEE
T ss_pred ----CCEEEeCEEEECCCCCc
Confidence 45799999999999754
No 74
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.01 E-value=1.1e-09 Score=110.12 Aligned_cols=117 Identities=20% Similarity=0.299 Sum_probs=82.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
..+||+|||||++|+++|+.|++ .|++|+|||+. .+| |.|.... +. ..+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~g--------g~~~~~~-------------~~--~~~~---- 63 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM--NNISCRIIESMPQLG--------GQLAALY-------------PE--KHIY---- 63 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------HHHHHTC-------------TT--SEEC----
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCC--------CcccccC-------------CC--cccc----
Confidence 35899999999999999999998 68999999965 444 3332110 00 0000
Q ss_pred hcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEee
Q 011458 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEK 207 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 207 (485)
.. .+. | ......+.+.+.+.+++.++ +++++++|+++..++ ++.+.|.+.+
T Consensus 64 -~~-----------~~~-----------~-~~~~~~~~~~l~~~~~~~~~----~~~~~~~v~~i~~~~-~~~~~v~~~~ 114 (360)
T 3ab1_A 64 -DV-----------AGF-----------P-EVPAIDLVESLWAQAERYNP----DVVLNETVTKYTKLD-DGTFETRTNT 114 (360)
T ss_dssp -CS-----------TTC-----------S-SEEHHHHHHHHHHHHHTTCC----EEECSCCEEEEEECT-TSCEEEEETT
T ss_pred -cC-----------CCC-----------C-CCCHHHHHHHHHHHHHHhCC----EEEcCCEEEEEEECC-CceEEEEECC
Confidence 00 000 0 01235667778888888899 999999999998764 3468888765
Q ss_pred ecCCceEEEEcCeEEEecCCC
Q 011458 208 RTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~ 228 (485)
+..+.+|.||+|||+.
T Consensus 115 -----g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 115 -----GNVYRSRAVLIAAGLG 130 (360)
T ss_dssp -----SCEEEEEEEEECCTTC
T ss_pred -----CcEEEeeEEEEccCCC
Confidence 5679999999999984
No 75
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.00 E-value=1.1e-09 Score=109.05 Aligned_cols=114 Identities=20% Similarity=0.249 Sum_probs=78.8
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
.+.+||+|||||++|+++|+.|++ .|.+|+|+|+..+| |.|...... ..++ .+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~g--------g~~~~~~~~--------~~~~----~~----- 64 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR--AQLAPLVFEGTSFG--------GALMTTTDV--------ENYP----GF----- 64 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH--TTCCCEEECCSSCS--------CGGGSCSCB--------CCST----TC-----
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCC--------Cceeccchh--------hhcC----CC-----
Confidence 346899999999999999999999 68999999976555 333221100 0000 00
Q ss_pred hcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEE-EEe
Q 011458 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLL-KVE 206 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V-~~~ 206 (485)
|.......+.+.+.+.+.+.|+ ++++++ |+++.. + +.+.| .+.
T Consensus 65 ----------------------------~~~~~~~~~~~~l~~~~~~~~v----~~~~~~-v~~i~~-~--~~~~v~~~~ 108 (335)
T 2a87_A 65 ----------------------------RNGITGPELMDEMREQALRFGA----DLRMED-VESVSL-H--GPLKSVVTA 108 (335)
T ss_dssp ----------------------------TTCBCHHHHHHHHHHHHHHTTC----EEECCC-EEEEEC-S--SSSEEEEET
T ss_pred ----------------------------CCCCCHHHHHHHHHHHHHHcCC----EEEEee-EEEEEe-C--CcEEEEEeC
Confidence 0001234566677777888899 999987 888876 3 44666 554
Q ss_pred eecCCceEEEEcCeEEEecCCCc
Q 011458 207 KRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+ +..+.+|.||+|||+.+
T Consensus 109 ~-----g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 109 D-----GQTHRARAVILAMGAAA 126 (335)
T ss_dssp T-----SCEEEEEEEEECCCEEE
T ss_pred C-----CCEEEeCEEEECCCCCc
Confidence 4 56799999999999754
No 76
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.99 E-value=5.3e-09 Score=109.96 Aligned_cols=101 Identities=18% Similarity=0.187 Sum_probs=67.6
Q ss_pred HHHHHHHhcCCceeec-CCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCc
Q 011458 134 DTMSWFSDHGVELKTE-DDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 212 (485)
Q Consensus 134 ~~~~~~~~~Gi~~~~~-~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 212 (485)
++...+...|.++..- ...++.| ....++.+.+.+.+++.|| +++++++|+++..++ +.+.+.+.+...++
T Consensus 212 E~A~~l~~~g~~Vtlv~~~~~~l~--~~d~~~~~~l~~~l~~~gV----~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~ 283 (491)
T 3urh_A 212 ELGSVWARLGAKVTVVEFLDTILG--GMDGEVAKQLQRMLTKQGI----DFKLGAKVTGAVKSG--DGAKVTFEPVKGGE 283 (491)
T ss_dssp HHHHHHHHHTCEEEEECSSSSSSS--SSCHHHHHHHHHHHHHTTC----EEECSEEEEEEEEET--TEEEEEEEETTSCC
T ss_pred HHHHHHHHcCCEEEEEeccccccc--cCCHHHHHHHHHHHHhCCC----EEEECCeEEEEEEeC--CEEEEEEEecCCCc
Confidence 4555666777765532 2334443 2346778888999999999 999999999998764 56666665311133
Q ss_pred eEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 213 VECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 213 ~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
...+.+|.||+|+|..+....+ ++..|+.+
T Consensus 284 ~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~ 314 (491)
T 3urh_A 284 ATTLDAEVVLIATGRKPSTDGLGLAKAGVVL 314 (491)
T ss_dssp CEEEEESEEEECCCCEECCTTSCHHHHTCCB
T ss_pred eEEEEcCEEEEeeCCccCCCccCchhcCceE
Confidence 4689999999999976543222 44556554
No 77
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.99 E-value=4.3e-10 Score=114.12 Aligned_cols=156 Identities=20% Similarity=0.172 Sum_probs=86.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+||+|||||++|+++|+.|++ .|.+|+|+|+....+. .++...... .....++.+. +...+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~--~G~~v~viE~~~~~~~-----~~~~~~l~~---~~~~~l~~~g-----~~~~~~~~ 75 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQ--NGWDVRLHEKSSELRA-----FGAGIYLWH---NGLRVLEGLG-----ALDDVLQG 75 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSCCC-----CSSEEEEEH---HHHHHHHHTT-----CHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCC-----CCceEEeCc---cHHHHHHHcC-----CHHHHHhh
Confidence 5799999999999999999999 6899999996532210 011100000 0001111110 00000000
Q ss_pred CChHHHHHHHHhcCCceeecC--CCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEee
Q 011458 130 HGPMDTMSWFSDHGVELKTED--DGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEK 207 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~--~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 207 (485)
-.+.....++.. |..+.... +... .......+.+.|.+.+.+.|+ +++++++|++++. + + .|++.+
T Consensus 76 ~~~~~~~~~~~~-g~~~~~~~~~~~~~--~~~~r~~l~~~L~~~~~~~gv----~i~~~~~v~~i~~-~--~--~v~~~~ 143 (379)
T 3alj_A 76 SHTPPTYETWMH-NKSVSKETFNGLPW--RIMTRSHLHDALVNRARALGV----DISVNSEAVAADP-V--G--RLTLQT 143 (379)
T ss_dssp CBCCSCEEEEET-TEEEEEECGGGCCE--EEEEHHHHHHHHHHHHHHTTC----EEESSCCEEEEET-T--T--EEEETT
T ss_pred CCCccceEEEeC-CceeeeccCCCCce--EEECHHHHHHHHHHHHHhcCC----EEEeCCEEEEEEe-C--C--EEEECC
Confidence 000000000000 10000000 0000 012346788899999999999 9999999999976 3 4 666654
Q ss_pred ecCCceEEEEcCeEEEecCCCchhHHHHHHCCC
Q 011458 208 RTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 240 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~ 240 (485)
+.++.||.||+|+|..+. +.+.++.
T Consensus 144 -----g~~~~ad~vV~AdG~~s~---vr~~l~~ 168 (379)
T 3alj_A 144 -----GEVLEADLIVGADGVGSK---VRDSIGF 168 (379)
T ss_dssp -----SCEEECSEEEECCCTTCH---HHHHHCC
T ss_pred -----CCEEEcCEEEECCCccHH---HHHHhcC
Confidence 567999999999998773 4455554
No 78
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.99 E-value=5.7e-09 Score=106.54 Aligned_cols=144 Identities=18% Similarity=0.188 Sum_probs=81.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+||+|||||++|+++|+.|++ .|.+|+|+|+..... .+.++.-..+ ......++.+.-..... .
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~----~~~~~g~~l~---~~~~~~l~~~g~~~~~~------~ 69 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRD--AGVDVDVYERSPQPL----SGFGTGIVVQ---PELVHYLLEQGVELDSI------S 69 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSC----CCCSCEEECC---HHHHHHHHHTTCCGGGT------C
T ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCC----CccccccccC---hhHHHHHHHcCCccccc------c
Confidence 5799999999999999999999 689999999653211 0011110000 00011112111000000 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeee---ecC---CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEE
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVF---PVS---DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLL 203 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~---p~~---~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V 203 (485)
... .+..+....+|... +.. .....+.+.|.+.+ .++ +++++++|+++..++ +.+.|
T Consensus 70 ~~~---------~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~----~i~~~~~v~~i~~~~--~~v~v 132 (397)
T 2vou_A 70 VPS---------SSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELF--GPE----RYHTSKCLVGLSQDS--ETVQM 132 (397)
T ss_dssp BCC---------CEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHH--CST----TEETTCCEEEEEECS--SCEEE
T ss_pred ccc---------cceEEEecCCCCccccccCcccccCHHHHHHHHHHhC--CCc----EEEcCCEEEEEEecC--CEEEE
Confidence 000 00000000012111 100 11245566666654 488 999999999998775 55778
Q ss_pred EEeeecCCceEEEEcCeEEEecCCCch
Q 011458 204 KVEKRTMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 204 ~~~~~~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
++.+ +.++.||.||.|+|..+.
T Consensus 133 ~~~~-----g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 133 RFSD-----GTKAEANWVIGADGGASV 154 (397)
T ss_dssp EETT-----SCEEEESEEEECCCTTCH
T ss_pred EECC-----CCEEECCEEEECCCcchh
Confidence 7765 567999999999998874
No 79
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.97 E-value=3e-09 Score=100.51 Aligned_cols=121 Identities=11% Similarity=0.026 Sum_probs=80.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
++||+|||||++|+.+|+.|++ .|.+|+|||+. ... | ..|+... . .+. ...+. .
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~--~g~~v~lie~~~~~~------G-~~~~~~~---~-------~~~--~~~~~----~ 57 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ--KGVRVGLLTQSLDAV------M-MPFLPPK---P-------PFP--PGSLL----E 57 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGT------T-CCSSCCC---S-------CCC--TTCHH----H
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCcC------C-cccCccc---c-------ccc--hhhHH----h
Confidence 5899999999999999999999 68999999975 211 1 1121110 0 010 01111 1
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHC-CCCCccEEEeCceEEEEEEcCCCCeEEEEEee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHR-GVAPSVVLQTGKVVTTASSDNAGRKFLLKVEK 207 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~-GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 207 (485)
.++ + ..+ | ....+.+.|.+.+++. |+ +++ +++|+++..++ +..+.|.+.+
T Consensus 58 ~~~-------------d----~~g---~---~~~~~~~~l~~~~~~~~gv----~i~-~~~v~~i~~~~-~~v~~v~~~~ 108 (232)
T 2cul_A 58 RAY-------------D----PKD---E---RVWAFHARAKYLLEGLRPL----HLF-QATATGLLLEG-NRVVGVRTWE 108 (232)
T ss_dssp HHC-------------C----TTC---C---CHHHHHHHHHHHHHTCTTE----EEE-ECCEEEEEEET-TEEEEEEETT
T ss_pred hhc-------------c----CCC---C---CHHHHHHHHHHHHHcCCCc----EEE-EeEEEEEEEeC-CEEEEEEECC
Confidence 111 0 111 1 3567778888899887 89 998 57999998765 3445677654
Q ss_pred ecCCceEEEEcCeEEEecCCCc
Q 011458 208 RTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+.++.||.||+|+|...
T Consensus 109 -----g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 109 -----GPPARGEKVVLAVGSFL 125 (232)
T ss_dssp -----SCCEECSEEEECCTTCS
T ss_pred -----CCEEECCEEEECCCCCh
Confidence 45799999999999743
No 80
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.97 E-value=1.4e-09 Score=107.36 Aligned_cols=114 Identities=19% Similarity=0.279 Sum_probs=81.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
.+||+|||||++|+++|+.|++ .|++|+|+|+. .+| |.+.. .|+.. .+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~g--------G~~~~-------------~~~~~--~~~----- 56 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM--RQASVKIIESLPQLG--------GQLSA-------------LYPEK--YIY----- 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------HHHHH-------------HCTTS--EEC-----
T ss_pred cceEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCCCCC--------ceehh-------------cCCCc--eEe-----
Confidence 4799999999999999999999 68999999965 444 22210 11100 000
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
.+. + +| .....++...+.+.+.+.++ +++++++|+++..++ ++.|.|.+.+
T Consensus 57 ~~~-----------~-----------~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~i~~~~-~~~~~v~~~~- 107 (332)
T 3lzw_A 57 DVA-----------G-----------FP-KIRAQELINNLKEQMAKFDQ----TICLEQAVESVEKQA-DGVFKLVTNE- 107 (332)
T ss_dssp CST-----------T-----------CS-SEEHHHHHHHHHHHHTTSCC----EEECSCCEEEEEECT-TSCEEEEESS-
T ss_pred ccC-----------C-----------CC-CCCHHHHHHHHHHHHHHhCC----cEEccCEEEEEEECC-CCcEEEEECC-
Confidence 000 0 00 01236677788888888899 999999999998875 3478888875
Q ss_pred cCCceEEEEcCeEEEecCC
Q 011458 209 TMNLVECIEADYLLIASGS 227 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~ 227 (485)
+ ++.+|.||+|||+
T Consensus 108 ----g-~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 108 ----E-THYSKTVIITAGN 121 (332)
T ss_dssp ----E-EEEEEEEEECCTT
T ss_pred ----C-EEEeCEEEECCCC
Confidence 3 4999999999998
No 81
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.97 E-value=2.9e-09 Score=111.17 Aligned_cols=56 Identities=21% Similarity=0.237 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 227 (485)
...+.+.|.+.+.+.|+ +|+++++|++|..++ ++.+.|.++ +.++.||.||+|++.
T Consensus 233 ~~~l~~~l~~~l~~~g~----~i~~~~~V~~i~~~~-~~~~~v~~~------~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 233 LEMLPQALETHLTSRGV----SVLRGQPVCGLSLQA-EGRWKVSLR------DSSLEADHVISAIPA 288 (477)
T ss_dssp TTHHHHHHHHHHHHTTC----EEECSCCCCEEEECG-GGCEEEECS------SCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHHHhcCC----EEEeCCEEEEEEEcC-CceEEEEEC------CeEEEcCEEEECCCH
Confidence 45788999999999999 999999999998865 344888664 357999999999985
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.96 E-value=1.3e-09 Score=113.46 Aligned_cols=153 Identities=16% Similarity=0.136 Sum_probs=86.0
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCC-----CcEEEEeCC-CCCcce--eecCCCceeccCCCCcchHHHhhccCCCCc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPK-----LNVVIIEKG-KPLSKV--KISGGGRCNVTNGHCADKMILAGHYPRGHK 120 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g-----~~V~llE~~-~~g~k~--~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~ 120 (485)
..+||+|||||++|+++|+.|++ .| .+|+|||+. .+|-.. ... .+.+... +...+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~--~g~~~~~~~v~liE~~~~~g~~~~~~~~---~~~~~~~-------~~~~l~~--- 93 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQE--RAQAQGALEVLFLDKQGDYRWHGNTLVS---QSELQIS-------FLKDLVS--- 93 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHH--HHHHHCCCCEEEEESCSSCCSSGGGCCS---SCBCSSC-------TTSSSST---
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--cccccCcccEEEEecCCCCCCcCCCCCC---CCcCCcc-------hhhcccc---
Confidence 45799999999999999999999 56 899999965 444100 000 0100000 0000000
Q ss_pred cchhhHhhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCC-CC
Q 011458 121 EFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNA-GR 199 (485)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~-~~ 199 (485)
+. .......+..|+...+........+..|| ....+.+.+...+++.++ +++++++|++|+.+++ ++
T Consensus 94 -~~----~p~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~----~i~~~~~V~~i~~~~~~~~ 161 (463)
T 3s5w_A 94 -LR----NPTSPYSFVNYLHKHDRLVDFINLGTFYP---CRMEFNDYLRWVASHFQE----QSRYGEEVLRIEPMLSAGQ 161 (463)
T ss_dssp -TT----CTTCTTSHHHHHHHTTCHHHHHHHCCSCC---BHHHHHHHHHHHHTTCTT----TEEESEEEEEEEEEEETTE
T ss_pred -cc----CCCCCCChhHhhhhcCceeecccccCCCC---CHHHHHHHHHHHHHHcCC----eEEeCCEEEEEEEecCCCc
Confidence 00 00001122234433332111111122333 345677777777888889 9999999999987520 13
Q ss_pred eE--EEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 200 KF--LLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 200 ~~--~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.| .|.+.+ ..+...++.+|.||+|||+.+
T Consensus 162 ~~~~~V~~~~-g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 162 VEALRVISRN-ADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEEEEEEEE-TTSCEEEEEESEEEECCCCEE
T ss_pred eEEEEEEEec-CCCceEEEEeCEEEECCCCCC
Confidence 33 666654 112223899999999999744
No 83
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.96 E-value=5.6e-09 Score=108.62 Aligned_cols=160 Identities=16% Similarity=0.170 Sum_probs=88.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCcc---chhhH
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKE---FRGSF 126 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~---~~~~~ 126 (485)
++||+|||||++|+++|+.|++ .|.+|+|||+....+ .|...|.. .... ..++.+...... +....
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~--~G~~V~vlE~~~~~~----~g~~~~g~----~l~~-~~l~~lg~~~~~~~~~~~~~ 74 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR--RGLKILLVDSKPWNR----IGDKPCGD----AVSK-AHFDKLGMPYPKGEELENKI 74 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS--SSCCEEEECSSCGGG----TTCSCCCC----EEEH-HHHHHTTCCCCCGGGEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCC----CCcccccc----cccH-HHHHHhcCCCCchHHHHhhh
Confidence 5899999999999999999999 789999999653211 00001100 0000 111211110000 00000
Q ss_pred --hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEE
Q 011458 127 --FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLK 204 (485)
Q Consensus 127 --l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~ 204 (485)
...+.+. ....+.....+. ......+.+.|.+.+.+.|+ +++++++|+++..++ +...+|.
T Consensus 75 ~~~~~~~~~--------~~~~~~~~~~~~----~i~r~~l~~~L~~~a~~~gv----~i~~~~~v~~i~~~~-~~v~gv~ 137 (453)
T 3atr_A 75 NGIKLYSPD--------MQTVWTVNGEGF----ELNAPLYNQRVLKEAQDRGV----EIWDLTTAMKPIFED-GYVKGAV 137 (453)
T ss_dssp EEEEEECTT--------SSCEEEEEEEEE----EECHHHHHHHHHHHHHHTTC----EEESSEEEEEEEEET-TEEEEEE
T ss_pred cceEEECCC--------CceEEeECCCcE----EEcHHHHHHHHHHHHHHcCC----EEEeCcEEEEEEEEC-CEEEEEE
Confidence 0000000 000011000011 12356788899999999999 999999999998765 3333465
Q ss_pred EeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCC
Q 011458 205 VEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 240 (485)
Q Consensus 205 ~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~ 240 (485)
+.+..+++..+++||.||.|+|..+. +.+.+|.
T Consensus 138 ~~~~~~G~~~~~~ad~VV~AdG~~s~---vr~~l~~ 170 (453)
T 3atr_A 138 LFNRRTNEELTVYSKVVVEATGYSRS---FRSKLPP 170 (453)
T ss_dssp EEETTTTEEEEEECSEEEECCGGGCT---TGGGSCT
T ss_pred EEEcCCCceEEEEcCEEEECcCCchh---hHHhcCC
Confidence 54200222348999999999998663 3344554
No 84
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.96 E-value=2.2e-09 Score=104.24 Aligned_cols=110 Identities=15% Similarity=0.261 Sum_probs=76.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
++||+|||||++|+++|++|++ .|.+|+|+|+..... +. .... ..|...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~~--------~~--~~~~--------~~~~~~----------- 50 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR--ARKNILLVDAGERRN--------RF--ASHS--------HGFLGQ----------- 50 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCCGG--------GG--CSCC--------CSSTTC-----------
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCccc--------cc--chhh--------cCCcCC-----------
Confidence 4799999999999999999999 689999999754321 00 0000 000000
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHC-CCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHR-GVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~-GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
......++...+.+.+.+. ++ +++. .+|+++..++ +.+.|.+.+
T Consensus 51 ---------------------------~~~~~~~~~~~~~~~~~~~~~v----~~~~-~~v~~i~~~~--~~~~v~~~~- 95 (297)
T 3fbs_A 51 ---------------------------DGKAPGEIIAEARRQIERYPTI----HWVE-GRVTDAKGSF--GEFIVEIDG- 95 (297)
T ss_dssp ---------------------------TTCCHHHHHHHHHHHHTTCTTE----EEEE-SCEEEEEEET--TEEEEEETT-
T ss_pred ---------------------------CCCCHHHHHHHHHHHHHhcCCe----EEEE-eEEEEEEEcC--CeEEEEECC-
Confidence 0112345566666667666 57 7765 4899998774 678888875
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..+.+|.||+|||+.+
T Consensus 96 ----g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 96 ----GRRETAGRLILAMGVTD 112 (297)
T ss_dssp ----SCEEEEEEEEECCCCEE
T ss_pred ----CCEEEcCEEEECCCCCC
Confidence 56899999999999854
No 85
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.95 E-value=4e-09 Score=109.54 Aligned_cols=160 Identities=12% Similarity=0.155 Sum_probs=87.2
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC-CCCcceeecCCC--ceeccCCCCcchHHHhhccCCC-----
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG-KPLSKVKISGGG--RCNVTNGHCADKMILAGHYPRG----- 118 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~-~~g~k~~~sG~g--~~n~tn~~~~~~~~~~~~~~~~----- 118 (485)
+.+||+|||||++|+++|..|++ .|. +|+|+|+. .+|+.....+.. .+++... .+......+..+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~--~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~---~~~~~~~~~~~g~~~~~ 79 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA--EKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPST---NPILTTEPIVGPAALPV 79 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT--TTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBC---CTTCCCCCBCCSSSCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHh--cCCCCCeEEEecCCCCCCeecCCCCCCcccccccc---cccccccccccccccCC
Confidence 35799999999999999999999 677 99999965 565322111100 0000000 000000000000
Q ss_pred -CccchhhHhhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCC
Q 011458 119 -HKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNA 197 (485)
Q Consensus 119 -~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~ 197 (485)
...++.. +....+.+...+ .+.++. .....|| ....+.+.|.+.+++.++ .++++++|++|..++
T Consensus 80 ~~~~~~~~-l~~~~~~~~~~~---~~~~~~--~~~~~~~---~~~~l~~~l~~~~~~~~~----~i~~~t~V~~v~~~~- 145 (447)
T 2gv8_A 80 YPSPLYRD-LQTNTPIELMGY---CDQSFK--PQTLQFP---HRHTIQEYQRIYAQPLLP----FIKLATDVLDIEKKD- 145 (447)
T ss_dssp CCCCCCTT-CBCSSCHHHHSC---TTCCCC--TTCCSSC---BHHHHHHHHHHHHGGGGG----GEECSEEEEEEEEET-
T ss_pred ccCchhhh-hccCCCHHHhcc---CCCCCC--CCCCCCC---CHHHHHHHHHHHHHHhhC----eEEeCCEEEEEEeCC-
Confidence 0000000 011111111111 111111 1111222 356778888888888788 899999999998764
Q ss_pred CCeEEEEEeeecCCc-eEEEEcCeEEEecCCC
Q 011458 198 GRKFLLKVEKRTMNL-VECIEADYLLIASGSS 228 (485)
Q Consensus 198 ~~~~~V~~~~~~~~~-~~~i~ad~VIlAtG~~ 228 (485)
+.|.|++.+..++. ..++.+|.||+|||..
T Consensus 146 -~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 146 -GSWVVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp -TEEEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred -CeEEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 67888776311122 2379999999999974
No 86
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.95 E-value=4.7e-09 Score=105.48 Aligned_cols=139 Identities=20% Similarity=0.248 Sum_probs=82.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
++||+|||||++|+++|++|++ .|. +|+|||+..+|+ .|....... . .+...+.. ..+-...+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~--~g~~~v~lie~~~~Gg--------~~~~~~~~~-~--~~~~~~~~--~~~g~~~~~ 68 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD--FGITDVIILEKGTVGH--------SFKHWPKST-R--TITPSFTS--NGFGMPDMN 68 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSSTTH--------HHHTSCTTC-B--CSSCCCCC--GGGTCCCTT
T ss_pred cCcEEEECcCHHHHHHHHHHHH--cCCCcEEEEecCCCCC--------ccccCcccc-c--ccCcchhc--ccCCchhhh
Confidence 4799999999999999999998 678 999999765552 221100000 0 00000000 000000000
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
.........+. . ...+ .....+...+.+.+++.|+ +++++++|+++..++ +.+.|.+.+
T Consensus 69 ~~~~~~~~~~~-~----------~~~~---~~~~~~~~~l~~~~~~~gv----~i~~~~~v~~i~~~~--~~~~v~~~~- 127 (369)
T 3d1c_A 69 AISMDTSPAFT-F----------NEEH---ISGETYAEYLQVVANHYEL----NIFENTVVTNISADD--AYYTIATTT- 127 (369)
T ss_dssp CSSTTCCHHHH-H----------CCSS---CBHHHHHHHHHHHHHHTTC----EEECSCCEEEEEECS--SSEEEEESS-
T ss_pred hcccccccccc-c----------cccC---CCHHHHHHHHHHHHHHcCC----eEEeCCEEEEEEECC--CeEEEEeCC-
Confidence 00000000000 0 0001 2345677788888899999 999999999998764 467887764
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+ .+.+|.||+|||+.+
T Consensus 128 ----g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 128 ----E-TYHADYIFVATGDYN 143 (369)
T ss_dssp ----C-CEEEEEEEECCCSTT
T ss_pred ----C-EEEeCEEEECCCCCC
Confidence 3 689999999999864
No 87
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.94 E-value=1.3e-08 Score=106.34 Aligned_cols=152 Identities=15% Similarity=0.163 Sum_probs=86.2
Q ss_pred CcEEEECcchHHHHHHHHHhccC-CCCc---EEEEeCC-CCCcceeecCCCceeccCCCCcchHH---HhhccCCCCccc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVA-PKLN---VVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMI---LAGHYPRGHKEF 122 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~-~g~~---V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~---~~~~~~~~~~~~ 122 (485)
+||+|||||++|++||..|++.. .|.+ |+|+|+. .+| |.|+........+.. ....|.......
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G--------G~w~~~~~~g~~~~g~~~~~~~y~~l~~~~ 74 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG--------GQWNYTWRTGLDENGEPVHSSMYRYLWSNG 74 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC--------GGGSCCSCCSBCTTSSBCCCCCCTTCBCSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC--------CEeecCCCCCccccCCCCcCccccchhhcC
Confidence 69999999999999999998711 2678 9999965 566 344332211000000 000011000000
Q ss_pred hhhHhhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccE--EEeCceEEEEEEcCCCCe
Q 011458 123 RGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVV--LQTGKVVTTASSDNAGRK 200 (485)
Q Consensus 123 ~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~--i~~~~~V~~i~~~~~~~~ 200 (485)
.... ..|.... +-...+. ....| .....+.+.+.+.+++.|+ + ++++++|++|..+++++.
T Consensus 75 ~~~~-~~~~~~~---~~~~~~~------~~~~~---~~~~~l~~~l~~~~~~~gv----~~~i~~~~~V~~v~~~~~~~~ 137 (464)
T 2xve_A 75 PKEC-LEFADYT---FDEHFGK------PIASY---PPREVLWDYIKGRVEKAGV----RKYIRFNTAVRHVEFNEDSQT 137 (464)
T ss_dssp CGGG-TCBTTBC---HHHHHSS------CCCSS---CBHHHHHHHHHHHHHHHTC----GGGEECSEEEEEEEEETTTTE
T ss_pred Chhh-cccCCCC---CCcccCC------CCCCC---CCHHHHHHHHHHHHHHcCC----cceEEeCCEEEEEEEcCCCCc
Confidence 0000 0010000 0000000 01112 2457788889999998898 8 999999999987641237
Q ss_pred EEEEEeeecCCceEEEEcCeEEEecCC
Q 011458 201 FLLKVEKRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 201 ~~V~~~~~~~~~~~~i~ad~VIlAtG~ 227 (485)
|.|++.+...+...++.+|.||+|||.
T Consensus 138 ~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 138 FTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp EEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred EEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 888876411222367999999999994
No 88
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.94 E-value=2.8e-09 Score=104.97 Aligned_cols=112 Identities=22% Similarity=0.292 Sum_probs=77.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+||+|||||++|+++|++|++ .|++|+|+|+..+| |.+...... ..++ .+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~g--------g~~~~~~~~--------~~~~----~~------- 55 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAAR--ANLQPVLITGMEKG--------GQLTTTTEV--------ENWP----GD------- 55 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--TTCCCEEECCSSTT--------GGGGGCSBC--------CCST----TC-------
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCcEEEEccCCCC--------ceEecchhh--------hhCC----CC-------
Confidence 5799999999999999999999 68999999976555 233211100 0000 00
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
|.......+.+.+.+.+.+.++ +++.++ |+.+..++ +.+.+ +.+
T Consensus 56 --------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-v~~i~~~~--~~~~v-~~~-- 99 (320)
T 1trb_A 56 --------------------------PNDLTGPLLMERMHEHATKFET----EIIFDH-INKVDLQN--RPFRL-NGD-- 99 (320)
T ss_dssp --------------------------CSSCBHHHHHHHHHHHHHHTTC----EEECCC-EEEEECSS--SSEEE-EES--
T ss_pred --------------------------CCCCCHHHHHHHHHHHHHHCCC----EEEEee-eeEEEecC--CEEEE-EeC--
Confidence 0001224556667777888899 999986 88887654 56777 443
Q ss_pred CCceEEEEcCeEEEecCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..+.+|.||+|||+.+
T Consensus 100 ---~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 100 ---NGEYTCDALIIATGASA 116 (320)
T ss_dssp ---SCEEEEEEEEECCCEEE
T ss_pred ---CCEEEcCEEEECCCCCc
Confidence 56799999999999754
No 89
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.93 E-value=4.8e-09 Score=111.79 Aligned_cols=137 Identities=20% Similarity=0.188 Sum_probs=85.9
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
+..+||+|||||++|+++|+.|++ .|.+|+|||+. .+| |.|........ .... ..... .
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~G--------G~w~~~~~pg~-------~~d~-~~~~~-~- 73 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE--LGRSVHVIETAGDVG--------GVWYWNRYPGA-------RCDI-ESIEY-C- 73 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------THHHHCCCTTC-------BCSS-CTTTS-S-
T ss_pred CCCCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCC--------CcccccCCCce-------eecc-ccccc-c-
Confidence 346899999999999999999999 68999999965 555 33321110000 0000 00000 0
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCC--CCCccEEEeCceEEEEEEcCCCCeEEEE
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRG--VAPSVVLQTGKVVTTASSDNAGRKFLLK 204 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~G--V~~~~~i~~~~~V~~i~~~~~~~~~~V~ 204 (485)
..|.+.. ..... + ...|+ ...++.+.+...+++.+ + .++++++|+++..+++++.|.|+
T Consensus 74 -~~f~~~~----~~~~~--~-----~~~~~---~~~~i~~yl~~~~~~~~l~~----~i~~~~~V~~~~~~~~~~~w~V~ 134 (542)
T 1w4x_A 74 -YSFSEEV----LQEWN--W-----TERYA---SQPEILRYINFVADKFDLRS----GITFHTTVTAAAFDEATNTWTVD 134 (542)
T ss_dssp -CCSCHHH----HHHCC--C-----CBSSC---BHHHHHHHHHHHHHHTTGGG----GEECSCCEEEEEEETTTTEEEEE
T ss_pred -cccChhh----hhccC--c-----ccccC---CHHHHHHHHHHHHHHcCCCc----eEEcCcEEEEEEEcCCCCeEEEE
Confidence 0112211 11111 1 11232 34667777877777776 5 78999999999876423578888
Q ss_pred EeeecCCceEEEEcCeEEEecCCC
Q 011458 205 VEKRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 205 ~~~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
+.+ +.+++||.||+|||..
T Consensus 135 ~~~-----G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 135 TNH-----GDRIRARYLIMASGQL 153 (542)
T ss_dssp ETT-----CCEEEEEEEEECCCSC
T ss_pred ECC-----CCEEEeCEEEECcCCC
Confidence 865 5679999999999964
No 90
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.93 E-value=3.8e-09 Score=110.24 Aligned_cols=96 Identities=16% Similarity=0.236 Sum_probs=64.2
Q ss_pred HHHHHHHhcCCceeec-CCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEE-EeeecCC
Q 011458 134 DTMSWFSDHGVELKTE-DDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLK-VEKRTMN 211 (485)
Q Consensus 134 ~~~~~~~~~Gi~~~~~-~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~-~~~~~~~ 211 (485)
++...+...|.++..- ...++.| ....++.+.+.+.+++.|| +++++++|+++..++ ++.+.|. +.+
T Consensus 184 e~A~~l~~~g~~Vt~v~~~~~~l~--~~~~~~~~~l~~~l~~~Gv----~i~~~~~v~~i~~~~-~~~~~v~~~~~---- 252 (463)
T 4dna_A 184 EFANIFHGLGVKTTLIYRGKEILS--RFDQDMRRGLHAAMEEKGI----RILCEDIIQSVSADA-DGRRVATTMKH---- 252 (463)
T ss_dssp HHHHHHHHTTCEEEEECSSSSSST--TSCHHHHHHHHHHHHHTTC----EEECSCCEEEEEECT-TSCEEEEESSS----
T ss_pred HHHHHHHHcCCeEEEEEcCCcccc--ccCHHHHHHHHHHHHHCCC----EEECCCEEEEEEEcC-CCEEEEEEcCC----
Confidence 3445556666655432 2223333 2246778889999999999 999999999998764 3446677 654
Q ss_pred ceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 212 LVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 212 ~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
++ +.+|.||+|+|..+....+ ++.+|+++
T Consensus 253 -g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~ 282 (463)
T 4dna_A 253 -GE-IVADQVMLALGRMPNTNGLGLEAAGVRT 282 (463)
T ss_dssp -CE-EEESEEEECSCEEESCTTSSTGGGTCCB
T ss_pred -Ce-EEeCEEEEeeCcccCCCCCCccccCceE
Confidence 45 9999999999976542222 44556554
No 91
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.92 E-value=1.7e-09 Score=107.18 Aligned_cols=112 Identities=25% Similarity=0.340 Sum_probs=78.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-----CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-----KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRG 124 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-----~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~ 124 (485)
.+||+|||||++|+++|+.|++ .|++|+|+|+. ..| |.+..... ...++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~--~g~~v~lie~~~~~~~~~g--------g~~~~~~~--------~~~~~-------- 61 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAAR--AELKPLLFEGWMANDIAPG--------GQLTTTTD--------VENFP-------- 61 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTT--------CGGGGCSE--------ECCST--------
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeccCccccCCC--------ceeeeccc--------cccCC--------
Confidence 4799999999999999999999 68999999971 222 22211100 00000
Q ss_pred hHhhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEE
Q 011458 125 SFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLK 204 (485)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~ 204 (485)
. +|.......+.+.+.+.+.+.|+ +++.++ |+++..++ +.+.|.
T Consensus 62 ----~-------------------------~~~~~~~~~~~~~l~~~~~~~gv----~~~~~~-v~~i~~~~--~~~~v~ 105 (333)
T 1vdc_A 62 ----G-------------------------FPEGILGVELTDKFRKQSERFGT----TIFTET-VTKVDFSS--KPFKLF 105 (333)
T ss_dssp ----T-------------------------CTTCEEHHHHHHHHHHHHHHTTC----EEECCC-CCEEECSS--SSEEEE
T ss_pred ----C-------------------------CccCCCHHHHHHHHHHHHHHCCC----EEEEeE-EEEEEEcC--CEEEEE
Confidence 0 00001235667778888888999 999987 99998764 567777
Q ss_pred EeeecCCceEEEEcCeEEEecCCCc
Q 011458 205 VEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 205 ~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+ + +..+.+|.||+|||+++
T Consensus 106 ~-~-----~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 106 T-D-----SKAILADAVILAIGAVA 124 (333)
T ss_dssp C-S-----SEEEEEEEEEECCCEEE
T ss_pred E-C-----CcEEEcCEEEECCCCCc
Confidence 6 3 57899999999999864
No 92
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.90 E-value=1.2e-08 Score=108.89 Aligned_cols=61 Identities=21% Similarity=0.171 Sum_probs=48.6
Q ss_pred CChHHHHHHHHHHHHHC-CCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 159 DSSSSVIDCLLTEAKHR-GVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 159 ~~a~~v~~~L~~~l~~~-GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.....+...|.+.+++. || +++++ +|+++..++++..+.|.+.+ +.++.||.||+|+|..+
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv----~i~~~-~V~~i~~~~~g~~~~v~~~~-----G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGV----RHVED-RVEHVQRDANGNIESVRTAT-----GRVFDADLFVDCSGFRG 252 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCC----EEEEC-CEEEEEECTTSCEEEEEETT-----SCEEECSEEEECCGGGC
T ss_pred EcHHHHHHHHHHHHHhcCCc----EEEEC-eEeEEEEcCCCCEEEEEECC-----CCEEECCEEEECCCCch
Confidence 34677889999999998 99 99999 99999875412345677664 56799999999999765
No 93
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.90 E-value=1.3e-08 Score=107.89 Aligned_cols=72 Identities=22% Similarity=0.368 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCe---EEEEEeeecCCceE-EEEcCeEEEecCCCchhHHHHH
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRK---FLLKVEKRTMNLVE-CIEADYLLIASGSSQQGHRLAA 236 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~---~~V~~~~~~~~~~~-~i~ad~VIlAtG~~~~g~~la~ 236 (485)
..++.+.+.+.+++.|| +++++++|+++..++ ++. +.|.+.+ +. ++.+|.||+|+|..+....+++
T Consensus 254 ~~~~~~~l~~~l~~~GV----~i~~~~~V~~i~~~~-~~~v~~~~v~~~~-----G~~~i~aD~Vv~A~G~~p~~~~~l~ 323 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGM----EIISGSNVTRIEEDA-NGRVQAVVAMTPN-----GEMRIETDFVFLGLGEQPRSAELAK 323 (523)
T ss_dssp SHHHHHHHHHHHHHTTC----EEESSCEEEEEEECT-TSBEEEEEEEETT-----EEEEEECSCEEECCCCEECCHHHHH
T ss_pred cHHHHHHHHHHHHhCCc----EEEECCEEEEEEEcC-CCceEEEEEEECC-----CcEEEEcCEEEECcCCccCCccCHH
Confidence 46778889999999999 999999999998754 332 5666654 45 8999999999998764211677
Q ss_pred HCCCce
Q 011458 237 QLGHSI 242 (485)
Q Consensus 237 ~~G~~i 242 (485)
.+|+++
T Consensus 324 ~~gl~~ 329 (523)
T 1mo9_A 324 ILGLDL 329 (523)
T ss_dssp HHTCCB
T ss_pred HcCCcc
Confidence 777765
No 94
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.88 E-value=7.8e-09 Score=109.81 Aligned_cols=82 Identities=13% Similarity=0.147 Sum_probs=57.9
Q ss_pred HHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceE
Q 011458 135 TMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE 214 (485)
Q Consensus 135 ~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~ 214 (485)
+..+|.++|.++......++.|. ...++...+.+.+++.|+ ++++++.|+.+...+ +.+.|.+.+ +.
T Consensus 238 ~A~~~~~lG~~VTii~~~~~L~~--~D~ei~~~l~~~l~~~gi----~~~~~~~v~~~~~~~--~~~~v~~~~-----~~ 304 (542)
T 4b1b_A 238 CSGFLNSLGYDVTVAVRSIVLRG--FDQQCAVKVKLYMEEQGV----MFKNGILPKKLTKMD--DKILVEFSD-----KT 304 (542)
T ss_dssp HHHHHHHHTCCEEEEESSCSSTT--SCHHHHHHHHHHHHHTTC----EEEETCCEEEEEEET--TEEEEEETT-----SC
T ss_pred HHHHHHhcCCeEEEecccccccc--cchhHHHHHHHHHHhhcc----eeecceEEEEEEecC--CeEEEEEcC-----CC
Confidence 33445555554443222233332 235677889999999999 999999999998874 667777765 56
Q ss_pred EEEcCeEEEecCCCc
Q 011458 215 CIEADYLLIASGSSQ 229 (485)
Q Consensus 215 ~i~ad~VIlAtG~~~ 229 (485)
.+.+|.|++|+|..+
T Consensus 305 ~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 305 SELYDTVLYAIGRKG 319 (542)
T ss_dssp EEEESEEEECSCEEE
T ss_pred eEEEEEEEEcccccC
Confidence 788999999999655
No 95
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.88 E-value=7.7e-09 Score=106.45 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=33.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSK 89 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k 89 (485)
+||+|||||++|++||+.|++ .|.+|+|||+ +.+|+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~--~G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN--AGKKVLLLEGGERLGGR 39 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH--TTCCEEEECSSSSSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHH--cCCeEEEEecCCCccCe
Confidence 699999999999999999999 6899999995 567743
No 96
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.87 E-value=1.4e-08 Score=107.25 Aligned_cols=60 Identities=20% Similarity=0.152 Sum_probs=48.4
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
....+...|.+.+++.|| +++++ +|+++..++++..+.|.+.+ +.+++||.||.|+|.++
T Consensus 171 ~~~~l~~~L~~~a~~~gv----~~~~~-~v~~i~~~~~~~~~~v~~~~-----g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 171 DADEVARYLSEYAIARGV----RHVVD-DVQHVGQDERGWISGVHTKQ-----HGEISGDLFVDCTGFRG 230 (511)
T ss_dssp CHHHHHHHHHHHHHHTTC----EEEEC-CEEEEEECTTSCEEEEEESS-----SCEEECSEEEECCGGGC
T ss_pred cHHHHHHHHHHHHHHCCC----EEEEC-eEeEEEEcCCCCEEEEEECC-----CCEEEcCEEEECCCcch
Confidence 467888999999999999 99999 99999875412346677764 45799999999999865
No 97
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.87 E-value=8.8e-09 Score=109.82 Aligned_cols=136 Identities=19% Similarity=0.264 Sum_probs=86.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCC-CCcchHHHhhccCCCCccchhhH
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNG-HCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~-~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
..+||+|||||++|+++|+.|++ .|.+|+|||+. .+| |.|..... .+.- ..+ ...+ .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~G--------Gtw~~~~ypg~~~------dv~--s~~y--~- 78 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS--QGLTVRAFEAASGVG--------GVWYWNRYPGARC------DVE--SIDY--S- 78 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------THHHHCCCTTCBC------SSC--TTTS--S-
T ss_pred CCCCEEEECchHHHHHHHHHHHh--CCCCEEEEeCCCCCC--------CccccCCCCCcee------CCC--chhc--c-
Confidence 46899999999999999999999 78999999964 555 33321110 0000 000 0000 0
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEe
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVE 206 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~ 206 (485)
..|.+ +.....+. ...| ....++.+.+.+.+++.++ ...++++++|+++..+++.+.|.|++.
T Consensus 79 -~~f~~----~~~~~~~~-------~~~~---~~~~ei~~yl~~~~~~~g~--~~~i~~~~~V~~i~~~~~~~~w~V~~~ 141 (549)
T 4ap3_A 79 -YSFSP----ELEQEWNW-------SEKY---ATQPEILAYLEHVADRFDL--RRDIRFDTRVTSAVLDEEGLRWTVRTD 141 (549)
T ss_dssp -CCSCH----HHHHHCCC-------SSSS---CBHHHHHHHHHHHHHHTTC--GGGEECSCCEEEEEEETTTTEEEEEET
T ss_pred -ccccc----ccccCCCC-------ccCC---CCHHHHHHHHHHHHHHcCC--CccEEECCEEEEEEEcCCCCEEEEEEC
Confidence 01111 11111111 1122 2456788888888888875 115788999999987652357899887
Q ss_pred eecCCceEEEEcCeEEEecCC
Q 011458 207 KRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~ 227 (485)
+ +.++.+|.||+|||.
T Consensus 142 ~-----G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 142 R-----GDEVSARFLVVAAGP 157 (549)
T ss_dssp T-----CCEEEEEEEEECCCS
T ss_pred C-----CCEEEeCEEEECcCC
Confidence 5 667999999999994
No 98
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.86 E-value=1.9e-08 Score=103.00 Aligned_cols=63 Identities=19% Similarity=0.173 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHH-CC-CCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCch
Q 011458 161 SSSVIDCLLTEAKH-RG-VAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 161 a~~v~~~L~~~l~~-~G-V~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
...+.+.|.+.+.+ .| + +++++++|+++.. + +.+.|.+.+..++...+++||.||.|+|..+.
T Consensus 106 r~~l~~~L~~~~~~~~g~~----~v~~~~~v~~i~~-~--~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 106 RGELQMILLAAVRERLGQQ----AVRTGLGVERIEE-R--DGRVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHHHHHHCTT----SEEESEEEEEEEE-E--TTEEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHHHhhCCCc----EEEECCEEEEEec-C--CccEEEEecCCCCCceEEecCEEEECCCccch
Confidence 45778888888876 35 7 8999999999987 5 34666664311122367999999999998764
No 99
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.85 E-value=5.8e-09 Score=102.29 Aligned_cols=114 Identities=14% Similarity=0.144 Sum_probs=78.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
++||+|||||++|+++|+.|++ .|.+|+|+|+. .| |.|.... .. ..+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~li~~~-~g--------G~~~~~~--~~------~~~~~------------ 49 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR--KGIRTGLMGER-FG--------GQILDTV--DI------ENYIS------------ 49 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSS-TT--------GGGGGCC--EE------CCBTT------------
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCC-CC--------ceecccc--cc------ccccC------------
Confidence 3799999999999999999999 68999999853 23 3331110 00 00000
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCC-CCeEEEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNA-GRKFLLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~-~~~~~V~~~~~ 208 (485)
..+ .....+.+.+.+.+++.|+ +++.+++|+.+..+.. ++.+.|.+.+
T Consensus 50 -----------------------~~~---~~~~~~~~~~~~~~~~~~v----~~~~~~~v~~i~~~~~~~~~~~v~~~~- 98 (310)
T 1fl2_A 50 -----------------------VPK---TEGQKLAGALKVHVDEYDV----DVIDSQSASKLIPAAVEGGLHQIETAS- 98 (310)
T ss_dssp -----------------------BSS---EEHHHHHHHHHHHHHTSCE----EEECSCCEEEEECCSSTTCCEEEEETT-
T ss_pred -----------------------cCC---CCHHHHHHHHHHHHHHcCC----eEEccCEEEEEEecccCCceEEEEECC-
Confidence 000 0124556677777888899 9999999999976420 2367887764
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..+.+|.||+|||+.+
T Consensus 99 ----g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 99 ----GAVLKARSIIVATGAKW 115 (310)
T ss_dssp ----SCEEEEEEEEECCCEEE
T ss_pred ----CCEEEeCEEEECcCCCc
Confidence 56799999999999754
No 100
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.85 E-value=9.7e-09 Score=109.26 Aligned_cols=138 Identities=17% Similarity=0.212 Sum_probs=86.8
Q ss_pred CCCcEEEECcchHHHHHHHHHh-ccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 49 SEELLVVVGGGAAGVYGAIRAK-TVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la-~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
..+||+|||||++|+++|+.|+ + .|.+|+|||+. .+| |.|.... |+....... ..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~--~G~~v~viE~~~~~G--------Gtw~~~~------------ypg~~~d~~-s~ 63 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE--LGLTTVGFDKADGPG--------GTWYWNR------------YPGALSDTE-SH 63 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSSC--------THHHHCC------------CTTCEEEEE-GG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc--CCCCEEEEECCCCCC--------CcccccC------------CCCceecCC-cc
Confidence 3579999999999999999999 7 68999999964 555 3332111 111000000 00
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEe
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVE 206 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~ 206 (485)
...+.... +.....+. ...|+ ...++.+.+.+.+++.|+ ...++++++|+++..+++++.|.|.+.
T Consensus 64 ~~~~~~~~--~~~~~~~~-------~~~~~---~~~ei~~~l~~~~~~~g~--~~~i~~~~~V~~i~~~~~~~~~~V~~~ 129 (540)
T 3gwf_A 64 LYRFSFDR--DLLQESTW-------KTTYI---TQPEILEYLEDVVDRFDL--RRHFKFGTEVTSALYLDDENLWEVTTD 129 (540)
T ss_dssp GSSCCSCH--HHHHHCCC-------SBSEE---EHHHHHHHHHHHHHHTTC--GGGEEESCCEEEEEEETTTTEEEEEET
T ss_pred eeeecccc--ccccCCCC-------cccCC---CHHHHHHHHHHHHHHcCC--cceeEeccEEEEEEEeCCCCEEEEEEc
Confidence 00111000 01111111 12232 346788888888888875 114788999999987752357889887
Q ss_pred eecCCceEEEEcCeEEEecCCC
Q 011458 207 KRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
+ +.++.+|.||+|||..
T Consensus 130 ~-----G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 130 H-----GEVYRAKYVVNAVGLL 146 (540)
T ss_dssp T-----SCEEEEEEEEECCCSC
T ss_pred C-----CCEEEeCEEEECCccc
Confidence 5 5689999999999953
No 101
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.84 E-value=6.1e-09 Score=109.08 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=33.9
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (485)
.++||+|||||++|++||+.|++ .|.+|+|+|++.+|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~--~G~~V~liE~~~~G 55 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAE--LGARAAVVESHKLG 55 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCC
Confidence 46899999999999999999999 68999999987766
No 102
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.83 E-value=3e-09 Score=111.63 Aligned_cols=144 Identities=22% Similarity=0.260 Sum_probs=80.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
++||+|||||++|+++|+.|++ .|++|+|+|+ +.+| |.| .+..+.+...+. ..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~~~G--------G~~--~~~g~~psk~ll-----------~~--- 59 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD--EGLKVAIVERYKTLG--------GVC--LNVGCIPSKALL-----------HN--- 59 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSCSS--------HHH--HHHSHHHHHHHH-----------HH---
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCC--------Cce--eeecccchHHHH-----------HH---
Confidence 5899999999999999999999 6899999997 5555 344 222222211111 00
Q ss_pred cCChHHHHHHHHhcCCceeecCCC--eeeec-CCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEE
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDG--RVFPV-SDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKV 205 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g--~~~p~-~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~ 205 (485)
....+...++...|+++...... .+... ......+...+...+++.|+ +++.++.+. .+ .+.+.|.+
T Consensus 60 -~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv----~~~~g~~~~---~~--~~~v~v~~ 129 (482)
T 1ojt_A 60 -AAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKV----DVIQGDGQF---LD--PHHLEVSL 129 (482)
T ss_dssp -HHHHHHHHHGGGGTCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC----EEEEEEEEE---EE--TTEEEEEE
T ss_pred -HHHHHHHHHHHhCCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCc----EEEeeEEEE---cc--CCEEEEEe
Confidence 00111223344455543211000 00000 00012233345566778899 999987654 23 25566765
Q ss_pred eee-------cCCceEEEEcCeEEEecCCCc
Q 011458 206 EKR-------TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 206 ~~~-------~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.+. .+++...+.+|+||+|||+.+
T Consensus 130 ~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p 160 (482)
T 1ojt_A 130 TAGDAYEQAAPTGEKKIVAFKNCIIAAGSRV 160 (482)
T ss_dssp EEEEETTEEEEEEEEEEEEEEEEEECCCEEE
T ss_pred cCCcccccccccCcceEEEcCEEEECCCCCC
Confidence 430 001116799999999999865
No 103
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.83 E-value=3.7e-09 Score=112.45 Aligned_cols=61 Identities=26% Similarity=0.179 Sum_probs=48.5
Q ss_pred CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 159 DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 159 ~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.....+...|.+.+++.|| +++.+ +|+++..++++..+.|.+.+ +.++.||.||+|+|..+
T Consensus 162 i~~~~l~~~L~~~a~~~gv----~~~~~-~v~~i~~~~~g~~~~v~~~~-----g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGV----NRVVD-EVVDVRLNNRGYISNLLTKE-----GRTLEADLFIDCSGMRG 222 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTC----EEEEC-CEEEEEECTTSCEEEEEETT-----SCEECCSEEEECCGGGC
T ss_pred EeHHHHHHHHHHHHHHCCC----EEEEe-eEeEEEEcCCCcEEEEEECC-----CcEEEeCEEEECCCCch
Confidence 3467888999999999999 99999 89999876412245677654 45799999999999765
No 104
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.82 E-value=9e-09 Score=105.06 Aligned_cols=52 Identities=19% Similarity=0.256 Sum_probs=38.8
Q ss_pred CCcccccccCCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHhhhhh
Q 011458 426 ISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDAT 479 (485)
Q Consensus 426 i~~~t~esk~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~~~~~ 479 (485)
+|+.||+++.+||+|++|++.+... .. -.-+.|...|.+|++++...+++++
T Consensus 276 VD~~tl~~t~~p~VfAiGDva~~~~-~p-k~a~~A~~qa~v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 276 VDIRTFESSLQPGIHVIGDACNAAP-MP-KSAYSANSQAKVAAAAVVALLKGEE 327 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBCCTT-SC-BSHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ECCCcceecCCCCEEEecccccCCC-CC-chHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5567899999999999996543211 11 1347899999999999988876654
No 105
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.82 E-value=1.7e-08 Score=106.99 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=46.8
Q ss_pred ChHHHHHHHHHHHHH-CCCCCccEEEeCceEEEEEEcCCCC-eEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 160 SSSSVIDCLLTEAKH-RGVAPSVVLQTGKVVTTASSDNAGR-KFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~-~GV~~~~~i~~~~~V~~i~~~~~~~-~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
....+...|.+.+++ .|| +++++ +|+++..++ ++ .+.|.+.+ +.+++||.||.|+|..+
T Consensus 173 ~r~~l~~~L~~~a~~~~Gv----~i~~~-~v~~i~~~~-~g~~~~v~~~~-----g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 173 NAAKFSQLLTEHCTQKLGV----THIRD-HVSQIINNQ-HGDIEKLITKQ-----NGEISGQLFIDCTGAKS 233 (526)
T ss_dssp CHHHHHHHHHHHHHHTSCC----EEEEC-CEEEEEECT-TSCEEEEEESS-----SCEEECSEEEECSGGGC
T ss_pred cHHHHHHHHHHHHHhcCCC----EEEEe-EEEEEEecC-CCcEEEEEECC-----CCEEEcCEEEECCCcch
Confidence 467788899999998 899 99999 699998764 33 34666654 45699999999999865
No 106
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.82 E-value=2.7e-08 Score=104.95 Aligned_cols=158 Identities=13% Similarity=0.180 Sum_probs=92.5
Q ss_pred CCCCCcEEEECcchHHHHHHHHHhccC------------CCCcEEEEeCC-CCC--cceeecCCCceeccCCCCcchHHH
Q 011458 47 TSSEELLVVVGGGAAGVYGAIRAKTVA------------PKLNVVIIEKG-KPL--SKVKISGGGRCNVTNGHCADKMIL 111 (485)
Q Consensus 47 ~~~~~dViIIGgG~aGl~aA~~la~~~------------~g~~V~llE~~-~~g--~k~~~sG~g~~n~tn~~~~~~~~~ 111 (485)
.+..+||||||+|++||++|+.|.+.+ .+..++.+|+. ..+ ...... +.+|++. |
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p-~~~~q~~---------f 105 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVP-GSKMQIS---------F 105 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCT-TCBCSSC---------G
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCC-Ccccccc---------c
Confidence 345689999999999999999997621 13456667743 222 000000 1111111 0
Q ss_pred hhccCCCCccchhhHhhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEE
Q 011458 112 AGHYPRGHKEFRGSFFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTT 191 (485)
Q Consensus 112 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~ 191 (485)
.+....-. ..-++..+..++.+.|.-+..-.....|| ...++.++|...+++.+. .++++++|++
T Consensus 106 l~Dlvtl~--------~P~s~~sf~~yl~~~~rl~~f~~~~~~~p---~r~E~~~Yl~~~A~~~~~----~vrf~~~V~~ 170 (501)
T 4b63_A 106 IKDLATLR--------DPRSSFTFLNYLHQKGRLIHFTNLSTFLP---ARLEFEDYMRWCAQQFSD----VVAYGEEVVE 170 (501)
T ss_dssp GGSSSTTT--------CTTCTTSHHHHHHHHTCHHHHHTTCCSCC---BHHHHHHHHHHHHHTTGG----GEEESEEEEE
T ss_pred hhhhcccc--------CCCCccchHHHHHHhCCccCCccccCCCC---CHHHHHHHHHHHHHHcCC----ceEcceEEEe
Confidence 11110000 00011223455555443222212234454 356788999988888887 8999999999
Q ss_pred EEEcCCC------CeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 192 ASSDNAG------RKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 192 i~~~~~~------~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
++.++.+ +.|.|++.+...+...++.|+.||+|||..+
T Consensus 171 v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 171 VIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp EEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred eccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 9865311 2588988764445567899999999999644
No 107
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.82 E-value=9.9e-09 Score=106.54 Aligned_cols=54 Identities=15% Similarity=0.251 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 227 (485)
...+.+.|.+.+.+ + +|+++++|++|+.++ +.+.|++.+ +.++.||.||+|+..
T Consensus 234 ~~~l~~~l~~~l~~--~----~i~~~~~V~~i~~~~--~~~~v~~~~-----g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 234 LQTLVEEIEKQLKL--T----KVYKGTKVTKLSHSG--SCYSLELDN-----GVTLDADSVIVTAPH 287 (470)
T ss_dssp THHHHHHHHHTCCS--E----EEECSCCEEEEEECS--SSEEEEESS-----SCEEEESEEEECSCH
T ss_pred HHHHHHHHHHhcCC--C----EEEeCCceEEEEEcC--CeEEEEECC-----CCEEECCEEEECCCH
Confidence 44566666555433 6 899999999999875 558888875 567999999999985
No 108
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.82 E-value=3.5e-09 Score=111.42 Aligned_cols=59 Identities=12% Similarity=0.179 Sum_probs=45.7
Q ss_pred eecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecC
Q 011458 155 FPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASG 226 (485)
Q Consensus 155 ~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG 226 (485)
||.......+.++|.+.+.+.|+ +++++++|++|..++ +. +++.+ +.++.||.||.++-
T Consensus 215 ~~~~gG~~~l~~~l~~~l~~~g~----~i~~~~~V~~I~~~~--~~--v~~~~-----G~~~~ad~vI~t~P 273 (513)
T 4gde_A 215 FPARGGTGGIWIAVANTLPKEKT----RFGEKGKVTKVNANN--KT--VTLQD-----GTTIGYKKLVSTMA 273 (513)
T ss_dssp EESSSHHHHHHHHHHHTSCGGGE----EESGGGCEEEEETTT--TE--EEETT-----SCEEEEEEEEECSC
T ss_pred ecccCCHHHHHHHHHHHHHhcCe----eeecceEEEEEEccC--CE--EEEcC-----CCEEECCEEEECCC
Confidence 34344567788999999999999 999999999998764 43 44554 67899999998764
No 109
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.82 E-value=1.8e-09 Score=112.40 Aligned_cols=139 Identities=22% Similarity=0.233 Sum_probs=79.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
++||+|||||++|++||++|++ .|++|+|+|+..+| |.| .+..+.+...+.. ..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~g--------G~~--~~~g~~p~k~l~~-----------~~--- 56 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQ--LGQKVTIVEKGNLG--------GVC--LNVGCIPSKALIS-----------AS--- 56 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT--------HHH--HHTSHHHHHHHHH-----------HH---
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCC--------CcC--cCcCchhhHHHHH-----------HH---
Confidence 5899999999999999999999 68999999977555 445 2323322111110 00
Q ss_pred CChHHHHHHHHhcCCceeecC--CCeeeecC-CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEe
Q 011458 130 HGPMDTMSWFSDHGVELKTED--DGRVFPVS-DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVE 206 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~--~g~~~p~~-~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~ 206 (485)
...+...++...|+.+.... ...+++.. .....+.+.+.+.+++.|+ +++.++.+. + +. +.+.|.+.
T Consensus 57 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv----~~~~g~~~~-i--d~--~~v~V~~~ 126 (455)
T 1ebd_A 57 -HRYEQAKHSEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKV----EIVKGEAYF-V--DA--NTVRVVNG 126 (455)
T ss_dssp -HHHHHHHTCGGGTEECCSCEECHHHHHHHHHHHHHHHHHHHHHHHHTTTC----EEEESEEEE-E--ET--TEEEEEET
T ss_pred -HHHHHHHHHHhcCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEEEEE-c--cC--CeEEEEeC
Confidence 00011112222333211000 00000000 0012244455667778899 999998654 3 32 56777665
Q ss_pred eecCCce-EEEEcCeEEEecCCCc
Q 011458 207 KRTMNLV-ECIEADYLLIASGSSQ 229 (485)
Q Consensus 207 ~~~~~~~-~~i~ad~VIlAtG~~~ 229 (485)
+ + .++.+|+||+|||+.+
T Consensus 127 ~-----G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 127 D-----SAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp T-----EEEEEECSEEEECCCEEE
T ss_pred C-----CcEEEEeCEEEEecCCCC
Confidence 3 3 6799999999999865
No 110
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.81 E-value=7.4e-09 Score=101.39 Aligned_cols=115 Identities=22% Similarity=0.270 Sum_probs=77.9
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEE-EeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVI-IEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~l-lE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
.++||+|||||++|++||+.|++ .|++|+| +|++.+| |.+...... ..|+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~li~e~~~~g--------G~~~~~~~~--------~~~~~~--------- 55 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR--GGLKNVVMFEKGMPG--------GQITSSSEI--------ENYPGV--------- 55 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH--HTCSCEEEECSSSTT--------GGGGGCSCB--------CCSTTC---------
T ss_pred CCceEEEECCCHHHHHHHHHHHH--CCCCeEEEEeCCCCC--------ceeeeecee--------ccCCCC---------
Confidence 46899999999999999999999 6899999 9996665 333222100 011100
Q ss_pred hcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEee
Q 011458 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEK 207 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 207 (485)
+......++...+.+.+++.++ +++++ +|.++ .++..+.|.+....
T Consensus 56 ----------------------------~~~~~~~~~~~~~~~~~~~~~v----~~~~~-~v~~i-~~~~~~~~~v~~~~ 101 (315)
T 3r9u_A 56 ----------------------------AQVMDGISFMAPWSEQCMRFGL----KHEMV-GVEQI-LKNSDGSFTIKLEG 101 (315)
T ss_dssp ----------------------------CSCBCHHHHHHHHHHHHTTTCC----EEECC-CEEEE-EECTTSCEEEEETT
T ss_pred ----------------------------CCCCCHHHHHHHHHHHHHHcCc----EEEEE-EEEEE-ecCCCCcEEEEEec
Confidence 0011235667777778888899 99988 88888 54201567753332
Q ss_pred ecCCceEEEEcCeEEEecCCCc
Q 011458 208 RTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
++ .+.+|.||+|||+.+
T Consensus 102 ----~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 102 ----GK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp ----SC-EEEEEEEEECCCEEE
T ss_pred ----CC-EEEeCEEEEeeCCCC
Confidence 13 899999999999743
No 111
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.81 E-value=2.9e-08 Score=104.13 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=49.6
Q ss_pred CCChHHHHHHHHHHHHHCC-CCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC
Q 011458 158 SDSSSSVIDCLLTEAKHRG-VAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 158 ~~~a~~v~~~L~~~l~~~G-V~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 227 (485)
......+.+.|.+.+.+.| + +|+++++|++|..++ +.+.|++.+ +..+.||.||+|+|.
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~----~i~~~~~V~~i~~~~--~~v~v~~~~-----g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRL----GYVFGCPVRSVVNER--DAARVTARD-----GREFVAKRVVCTIPL 310 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCE----EEESSCCEEEEEECS--SSEEEEETT-----CCEEEEEEEEECCCG
T ss_pred CCCHHHHHHHHHHHhhhcCce----EEEeCCEEEEEEEcC--CEEEEEECC-----CCEEEcCEEEECCCH
Confidence 4556788999999999988 9 999999999998764 557787764 557999999999995
No 112
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.80 E-value=1.3e-08 Score=106.24 Aligned_cols=142 Identities=22% Similarity=0.276 Sum_probs=79.3
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
.++||+|||||++|+++|+.|++ .|++|+|+|+. .+| |.| .+..+.+...+.. ..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~--~g~~V~liE~~~~~G--------G~~--~~~g~~p~k~l~~-----------~~- 60 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQ--LGFKTTCIEKRGALG--------GTC--LNVGCIPSKALLH-----------SS- 60 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSC--------CSH--HHHSHHHHHHHHH-----------HH-
T ss_pred ccCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcc--------ccc--cCcCccchHHHHH-----------HH-
Confidence 46899999999999999999999 58999999976 565 444 2222222111100 00
Q ss_pred hcCChHHHHHH-HHhcCCceeec--CCCeeeecC-CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEE
Q 011458 128 SLHGPMDTMSW-FSDHGVELKTE--DDGRVFPVS-DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLL 203 (485)
Q Consensus 128 ~~~~~~~~~~~-~~~~Gi~~~~~--~~g~~~p~~-~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V 203 (485)
...+.... +...|+..... ....+++.. .....+...+.+.+++.|+ +++.++.+. + +. +.+.|
T Consensus 61 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv----~~~~g~~~~-~--~~--~~~~v 128 (470)
T 1dxl_A 61 ---HMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKV----TYVKGYGKF-V--SP--SEISV 128 (470)
T ss_dssp ---HHHHHHHHTHHHHTEEESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC----EEEESCEEE-E--ET--TEEEE
T ss_pred ---HHHHHHHHHHHhcCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEeEEEE-e--cC--CEEEE
Confidence 00001111 33344432100 000000000 0012233445566777899 999998664 3 32 55666
Q ss_pred EEeeecCCceEEEEcCeEEEecCCCc
Q 011458 204 KVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 204 ~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.+.+ +....+.+|.||+|||+.+
T Consensus 129 ~~~~---G~~~~i~~d~lIiAtGs~p 151 (470)
T 1dxl_A 129 DTIE---GENTVVKGKHIIIATGSDV 151 (470)
T ss_dssp CCSS---SCCEEEECSEEEECCCEEE
T ss_pred EeCC---CceEEEEcCEEEECCCCCC
Confidence 6543 1126899999999999865
No 113
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.80 E-value=6.1e-09 Score=110.37 Aligned_cols=150 Identities=17% Similarity=0.202 Sum_probs=78.6
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCc-ceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLS-KVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~-k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
...+||+|||||++|++||+.|++ .|.+|+|+|+..... .....-+|.| .|..|.+... +....
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc--~~~GciPsk~-----------l~~~~ 94 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQ--YGKKVMVLDFVTPTPLGTRWGLGGTC--VNVGCIPKKL-----------MHQAA 94 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTCHH--HHHSHHHHHH-----------HHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeccCccccccCCCccccc--CCcCccchHH-----------HHHHH
Confidence 346899999999999999999999 689999999743110 0000113555 3333333111 11000
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecC-CC----hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeE
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVS-DS----SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKF 201 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~-~~----a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~ 201 (485)
...+....+..+|+...... ..-++.. .. ...+...+...+++.+| +++.+. +..+. ...+
T Consensus 95 ----~~~~~~~~~~~~g~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV----~~i~g~-a~~~d----~~~v 160 (519)
T 3qfa_A 95 ----LLGQALQDSRNYGWKVEETV-KHDWDRMIEAVQNHIGSLNWGYRVALREKKV----VYENAY-GQFIG----PHRI 160 (519)
T ss_dssp ----HHHHHHHHHHHTTBCCCSSC-CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC----EEECSE-EEEEE----TTEE
T ss_pred ----HHHHHHHHHHhcCcccCCcC-ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEE-EEEee----CCEE
Confidence 01122233444554332110 0000000 00 01122233445677899 987764 44332 2445
Q ss_pred EEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 202 LLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 202 ~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.|.+.+ ++..++.+|+||+|||+.+
T Consensus 161 ~v~~~~---g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 161 KATNNK---GKEKIYSAERFLIATGERP 185 (519)
T ss_dssp EEECTT---CCCCEEEEEEEEECCCEEE
T ss_pred EEEcCC---CCEEEEECCEEEEECCCCc
Confidence 565432 2234799999999999754
No 114
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.79 E-value=3.6e-08 Score=102.91 Aligned_cols=62 Identities=13% Similarity=0.158 Sum_probs=45.5
Q ss_pred CeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEE---eeecCCceEEEEcCeEEEecCCC
Q 011458 152 GRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKV---EKRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 152 g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~---~~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
+..+| ......+.+.|.+.+ |+ +|+++++|++|..++ +.+.|++ .+ ++++.||.||+|++..
T Consensus 229 ~~~~~-~gG~~~l~~~l~~~l---g~----~i~~~~~V~~i~~~~--~~~~v~~~~~~~-----g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 229 ALSTF-DGGLQVLIDALAASL---GD----AAHVGARVEGLARED--GGWRLIIEEHGR-----RAELSVAQVVLAAPAH 293 (478)
T ss_dssp CEEEE-TTCTHHHHHHHHHHH---GG----GEESSEEEEEEECC----CCEEEEEETTE-----EEEEECSEEEECSCHH
T ss_pred cEEEE-CCCHHHHHHHHHHHh---hh----hEEcCCEEEEEEecC--CeEEEEEeecCC-----CceEEcCEEEECCCHH
Confidence 34444 344567888887766 67 899999999998764 4577877 44 5689999999999853
No 115
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.79 E-value=2.3e-08 Score=106.45 Aligned_cols=137 Identities=20% Similarity=0.226 Sum_probs=85.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
..+||+|||||++|+++|+.|++ .|.+|+|||++ .+| |.|+.. .|+....... ...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~--~g~~v~iiE~~~~~G--------Gtw~~~------------~yPg~~~d~~-~~~ 64 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ--AGMKVLGIEAGEDVG--------GTWYWN------------RYPGCRLDTE-SYA 64 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC--------THHHHC------------CCTTCBCSSC-HHH
T ss_pred CCCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCC--------CccccC------------CCCceeecCc-hhh
Confidence 35799999999999999999998 78999999965 555 333211 1221111110 000
Q ss_pred hcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEee
Q 011458 128 SLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEK 207 (485)
Q Consensus 128 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 207 (485)
..+ .+....-..+. ....| ....++...+...+++.++. ..++++++|+++..+++++.|.|++.+
T Consensus 65 y~~------~f~~~~~~~~~---~~~~~---~~~~ei~~yl~~~~~~~~l~--~~i~~~~~V~~~~~~~~~~~w~V~~~~ 130 (545)
T 3uox_A 65 YGY------FALKGIIPEWE---WSENF---ASQPEMLRYVNRAADAMDVR--KHYRFNTRVTAARYVENDRLWEVTLDN 130 (545)
T ss_dssp HCH------HHHTTSSTTCC---CSBSS---CBHHHHHHHHHHHHHHHTCG--GGEECSCCEEEEEEEGGGTEEEEEETT
T ss_pred ccc------ccCcccccCCC---ccccC---CCHHHHHHHHHHHHHHcCCc--CcEEECCEEEEEEEeCCCCEEEEEECC
Confidence 000 01000000000 01122 23567778888888877651 147889999999876424678998876
Q ss_pred ecCCceEEEEcCeEEEecCC
Q 011458 208 RTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~ 227 (485)
++++.+|.||+|||.
T Consensus 131 -----G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 131 -----EEVVTCRFLISATGP 145 (545)
T ss_dssp -----TEEEEEEEEEECCCS
T ss_pred -----CCEEEeCEEEECcCC
Confidence 678999999999994
No 116
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.78 E-value=5.8e-08 Score=105.43 Aligned_cols=76 Identities=14% Similarity=0.276 Sum_probs=54.9
Q ss_pred ChHHHHHHHHHHHHHCC--CCCccEEEeCceEEEEEEcCC--CCeEEEEEeee---cCCceEEEEcCeEEEecCCCchhH
Q 011458 160 SSSSVIDCLLTEAKHRG--VAPSVVLQTGKVVTTASSDNA--GRKFLLKVEKR---TMNLVECIEADYLLIASGSSQQGH 232 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~G--V~~~~~i~~~~~V~~i~~~~~--~~~~~V~~~~~---~~~~~~~i~ad~VIlAtG~~~~g~ 232 (485)
....+.+.|.+.+.+.| + +|+++++|++++.+++ +..+.|++.+. .++...+++||.||.|+|+.+
T Consensus 139 ~q~~l~~~L~~~a~~~g~~v----~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S--- 211 (639)
T 2dkh_A 139 NQARVHDHYLERMRNSPSRL----EPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS--- 211 (639)
T ss_dssp CHHHHHHHHHHHHHHSTTCC----CCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC---
T ss_pred CHHHHHHHHHHHHHhCCCCc----EEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch---
Confidence 45678889999999885 5 7899999999987641 12466765420 123346899999999999987
Q ss_pred HHHHHCCCce
Q 011458 233 RLAAQLGHSI 242 (485)
Q Consensus 233 ~la~~~G~~i 242 (485)
.+.+.+|++.
T Consensus 212 ~vR~~lg~~~ 221 (639)
T 2dkh_A 212 NVRRAIGRQL 221 (639)
T ss_dssp HHHHHTTCCC
T ss_pred HHHHHhCCCC
Confidence 3566777764
No 117
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.78 E-value=5e-08 Score=100.14 Aligned_cols=71 Identities=18% Similarity=0.225 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCC
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 240 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~ 240 (485)
...+.+.+.+.+++.|| +++++++|+++..++ +....|.+.+ ++.+.||.||+|+|..+. ..+++..|+
T Consensus 193 ~~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~-~~v~~v~l~d-----G~~i~aD~Vv~a~G~~p~-~~l~~~~gl 261 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGV----DLRTGAAMDCIEGDG-TKVTGVRMQD-----GSVIPADIVIVGIGIVPC-VGALISAGA 261 (415)
T ss_dssp CHHHHHHHHHHHHHTTC----EEEETCCEEEEEESS-SBEEEEEESS-----SCEEECSEEEECSCCEES-CHHHHHTTC
T ss_pred CHHHHHHHHHHHHhCCC----EEEECCEEEEEEecC-CcEEEEEeCC-----CCEEEcCEEEECCCCccC-hHHHHhCCC
Confidence 46778888999999999 999999999998764 3445788775 678999999999998765 246777777
Q ss_pred ce
Q 011458 241 SI 242 (485)
Q Consensus 241 ~i 242 (485)
.+
T Consensus 262 ~~ 263 (415)
T 3lxd_A 262 SG 263 (415)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 118
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.77 E-value=1.2e-07 Score=97.08 Aligned_cols=71 Identities=13% Similarity=0.209 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCC
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 240 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~ 240 (485)
...+.+.+.+.+++.|| +++++++|+++..++ +....|.+.+ ++++.||.||+|+|..+. ..+++.+|+
T Consensus 183 ~~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~-~~v~~V~~~d-----G~~i~aD~Vv~a~G~~p~-~~l~~~~gl 251 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGI----RMHYGVRATEIAAEG-DRVTGVVLSD-----GNTLPCDLVVVGVGVIPN-VEIAAAAGL 251 (404)
T ss_dssp CHHHHHHHHHHHHHTTC----EEECSCCEEEEEEET-TEEEEEEETT-----SCEEECSEEEECCCEEEC-CHHHHHTTC
T ss_pred CHHHHHHHHHHHHhCCc----EEEECCEEEEEEecC-CcEEEEEeCC-----CCEEEcCEEEECcCCccC-HHHHHhCCC
Confidence 46778888999999999 999999999998764 3445677765 678999999999998664 256777887
Q ss_pred ce
Q 011458 241 SI 242 (485)
Q Consensus 241 ~i 242 (485)
.+
T Consensus 252 ~~ 253 (404)
T 3fg2_P 252 PT 253 (404)
T ss_dssp CB
T ss_pred CC
Confidence 65
No 119
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.77 E-value=5.7e-08 Score=107.32 Aligned_cols=38 Identities=18% Similarity=0.377 Sum_probs=33.6
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (485)
..+||+|||||++|++||+.|++ .|++|+|+|+ ..+|+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHN--FGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEecccceec
Confidence 46899999999999999999999 6899999995 56665
No 120
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.76 E-value=3.1e-08 Score=104.45 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEE-EEcCeEEEecCCCchhHHH-HHHC
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVEC-IEADYLLIASGSSQQGHRL-AAQL 238 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~-i~ad~VIlAtG~~~~g~~l-a~~~ 238 (485)
..++.+.+.+.+++.|| +++++++|+++..++ ++.+.|.+.+ +.. +.+|.||+|+|..+..-.+ ++.+
T Consensus 216 d~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~-~~~~~v~~~~-----g~~~~~~D~vi~a~G~~p~~~~l~~~~~ 285 (500)
T 1onf_A 216 DESVINVLENDMKKNNI----NIVTFADVVEIKKVS-DKNLSIHLSD-----GRIYEHFDHVIYCVGRSPDTENLKLEKL 285 (500)
T ss_dssp CHHHHHHHHHHHHHTTC----EEECSCCEEEEEESS-TTCEEEEETT-----SCEEEEESEEEECCCBCCTTTTSSCTTT
T ss_pred chhhHHHHHHHHHhCCC----EEEECCEEEEEEEcC-CceEEEEECC-----CcEEEECCEEEECCCCCcCCCCCCchhc
Confidence 35677888899999999 999999999998754 3446677654 455 9999999999977643123 3445
Q ss_pred CCce
Q 011458 239 GHSI 242 (485)
Q Consensus 239 G~~i 242 (485)
|+++
T Consensus 286 g~~~ 289 (500)
T 1onf_A 286 NVET 289 (500)
T ss_dssp TCCB
T ss_pred Cccc
Confidence 5543
No 121
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.76 E-value=3.2e-09 Score=106.90 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=33.1
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (485)
+++||+|||||++|+++|++|++ .|.+|+|||+..++
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~--~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILAR--KGYSVHILARDLPE 41 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCEEEEEeccCCC
Confidence 36899999999999999999999 68999999976555
No 122
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.76 E-value=6.4e-08 Score=98.27 Aligned_cols=43 Identities=16% Similarity=0.086 Sum_probs=36.4
Q ss_pred EEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCch
Q 011458 182 VLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 182 ~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
.|+++++|++++..+ ++.+.|++.+ +.+++||.||.|+|..+.
T Consensus 125 ~v~~~~~v~~~~~~~-~~~v~v~~~d-----G~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 125 TIQWNKTFVRYEHIE-NGGIKIFFAD-----GSHENVDVLVGADGSNSK 167 (412)
T ss_dssp TEECSCCEEEEEECT-TSCEEEEETT-----SCEEEESEEEECCCTTCH
T ss_pred eEEEEEEEEeeeEcC-CCeEEEEECC-----CCEEEeeEEEECCCCCcc
Confidence 789999999998765 5668888876 678999999999998763
No 123
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.76 E-value=1.5e-08 Score=106.31 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=33.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (485)
.++||+|||||++|++||+.|++ .|.+|+|+|++..|
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~--~g~~V~liE~~~~G 46 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS--YGAKTLLVEAKALG 46 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TSCCEEEEESSCTT
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH--CCCcEEEEeCCCcC
Confidence 35899999999999999999999 68999999987655
No 124
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.75 E-value=5.3e-08 Score=101.17 Aligned_cols=97 Identities=13% Similarity=0.152 Sum_probs=64.9
Q ss_pred HHHHHHHhcCCceeec-CCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCc
Q 011458 134 DTMSWFSDHGVELKTE-DDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 212 (485)
Q Consensus 134 ~~~~~~~~~Gi~~~~~-~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 212 (485)
++...+.+.|.++..- ...++.| ....++.+.+.+.+++.|| +++++++|+++..++ ++.+.|.+.+
T Consensus 181 e~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~~l~~~l~~~Gv----~i~~~~~v~~i~~~~-~~~~~v~~~~----- 248 (450)
T 1ges_A 181 ELGGVINGLGAKTHLFEMFDAPLP--SFDPMISETLVEVMNAEGP----QLHTNAIPKAVVKNT-DGSLTLELED----- 248 (450)
T ss_dssp HHHHHHHHTTCEEEEECSSSSSST--TSCHHHHHHHHHHHHHHSC----EEECSCCEEEEEECT-TSCEEEEETT-----
T ss_pred HHHHHHHhcCCEEEEEEeCCchhh--hhhHHHHHHHHHHHHHCCC----EEEeCCEEEEEEEeC-CcEEEEEECC-----
Confidence 3344555666655432 2223333 2235677888899999999 999999999998764 3446777764
Q ss_pred eEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 213 VECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 213 ~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
+..+.+|.||+|+|..+..-.+ ++.+|+++
T Consensus 249 g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~ 279 (450)
T 1ges_A 249 GRSETVDCLIWAIGREPANDNINLEAAGVKT 279 (450)
T ss_dssp SCEEEESEEEECSCEEESCTTSCHHHHTCCB
T ss_pred CcEEEcCEEEECCCCCcCCCCCCchhcCceE
Confidence 5689999999999976542222 45556554
No 125
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.75 E-value=3.6e-08 Score=102.88 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceE-EEEcCeEEEecCCCchhHHH-HHHCC
Q 011458 162 SSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE-CIEADYLLIASGSSQQGHRL-AAQLG 239 (485)
Q Consensus 162 ~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~-~i~ad~VIlAtG~~~~g~~l-a~~~G 239 (485)
.++.+.+.+.+++.|| +++++++|+++..++ +.+.|.+.+ ++ .+.+|.||+|+|..+..-.+ ++.+|
T Consensus 207 ~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~--~~~~v~~~~-----G~~~i~~D~vv~a~G~~p~~~~l~~~~~g 275 (463)
T 2r9z_A 207 PLLSATLAENMHAQGI----ETHLEFAVAALERDA--QGTTLVAQD-----GTRLEGFDSVIWAVGRAPNTRDLGLEAAG 275 (463)
T ss_dssp HHHHHHHHHHHHHTTC----EEESSCCEEEEEEET--TEEEEEETT-----CCEEEEESEEEECSCEEESCTTSCHHHHT
T ss_pred HHHHHHHHHHHHHCCC----EEEeCCEEEEEEEeC--CeEEEEEeC-----CcEEEEcCEEEECCCCCcCCCCCCchhcC
Confidence 5667788889999999 999999999998764 446777764 45 79999999999976542112 44555
Q ss_pred Cce
Q 011458 240 HSI 242 (485)
Q Consensus 240 ~~i 242 (485)
+++
T Consensus 276 ~~~ 278 (463)
T 2r9z_A 276 IEV 278 (463)
T ss_dssp CCC
T ss_pred Ccc
Confidence 543
No 126
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.74 E-value=2e-08 Score=104.84 Aligned_cols=141 Identities=19% Similarity=0.199 Sum_probs=78.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
++||+|||||++|++||++|++ .|.+|+|+|+. .+| |.|. |..+.+...+.. ..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~~G--------G~~~--~~g~~psk~l~~-----------~~-- 56 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ--LGMKTACVEKRGALG--------GTCL--NVGCIPSKALLH-----------AT-- 56 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSS--------HHHH--HHSHHHHHHHHH-----------HH--
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcC--------CcCC--CcCcHhHHHHHH-----------HH--
Confidence 5799999999999999999999 68999999976 565 4552 222222111110 00
Q ss_pred cCChHHHHHH-HHhcCCceeec---CCCeeeecC-CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEE
Q 011458 129 LHGPMDTMSW-FSDHGVELKTE---DDGRVFPVS-DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLL 203 (485)
Q Consensus 129 ~~~~~~~~~~-~~~~Gi~~~~~---~~g~~~p~~-~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V 203 (485)
...+.... +...|++.... +...++... .....+...+.+.+++.|+ +++.++.+. + +. ..+.|
T Consensus 57 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v----~~~~g~~~~-i--~~--~~~~v 125 (468)
T 2qae_A 57 --HLYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKV----TYYKGEGSF-E--TA--HSIRV 125 (468)
T ss_dssp --HHHHHHHHTHHHHTEECGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC----EEEEEEEEE-E--ET--TEEEE
T ss_pred --HHHHHHHHHHHhcCcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEEEEE-e--eC--CEEEE
Confidence 00000111 23344432000 000000000 0011233345566777899 999887553 3 32 55677
Q ss_pred EEeeecCCceEEEEcCeEEEecCCCc
Q 011458 204 KVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 204 ~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.+.+ +....+.+|+||+|||+.+
T Consensus 126 ~~~~---G~~~~~~~d~lviAtG~~p 148 (468)
T 2qae_A 126 NGLD---GKQEMLETKKTIIATGSEP 148 (468)
T ss_dssp EETT---SCEEEEEEEEEEECCCEEE
T ss_pred EecC---CceEEEEcCEEEECCCCCc
Confidence 6643 1126899999999999854
No 127
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.74 E-value=1.5e-08 Score=105.93 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=32.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (485)
++|||+|||||++|++||+.|++ .|++|+|+|+. .+|
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~g 39 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ--LGLKTALIEKYKGKE 39 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--HTCCEEEEECCBCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCEEEEEeCCCccC
Confidence 46899999999999999999999 58999999975 344
No 128
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.74 E-value=2.7e-08 Score=105.43 Aligned_cols=115 Identities=15% Similarity=0.183 Sum_probs=80.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
..+||+|||||++|++||++|++ .|.+|+|+|+. .| |.|..+. .. ..|.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~--~G~~v~lie~~-~G--------G~~~~~~--~~------~~~~------------ 259 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR--KGIRTGLMGER-FG--------GQVLDTV--DI------ENYI------------ 259 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSS-TT--------GGGTTCS--CB------CCBT------------
T ss_pred CcccEEEECCcHHHHHHHHHHHh--CCCeEEEEECC-CC--------Ccccccc--cc------cccC------------
Confidence 46899999999999999999999 68999999952 33 3332111 00 0000
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCC-CCeEEEEEee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNA-GRKFLLKVEK 207 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~-~~~~~V~~~~ 207 (485)
.+ | ......+.+.+.+.+++.|+ +++.+++|+++..+.. ++.+.|.+.+
T Consensus 260 ~~-------------------------~-~~~~~~l~~~l~~~~~~~gv----~v~~~~~v~~i~~~~~~~~~~~V~~~~ 309 (521)
T 1hyu_A 260 SV-------------------------P-KTEGQKLAGALKAHVSDYDV----DVIDSQSASKLVPAATEGGLHQIETAS 309 (521)
T ss_dssp TB-------------------------S-SBCHHHHHHHHHHHHHTSCE----EEECSCCEEEEECCSSTTSCEEEEETT
T ss_pred CC-------------------------C-CCCHHHHHHHHHHHHHHcCC----EEEcCCEEEEEEeccCCCceEEEEECC
Confidence 00 0 01234566777788888999 9999999999975420 2367888765
Q ss_pred ecCCceEEEEcCeEEEecCCCc
Q 011458 208 RTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 208 ~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..+.+|.||+|||+.+
T Consensus 310 -----g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 310 -----GAVLKARSIIIATGAKW 326 (521)
T ss_dssp -----SCEEEEEEEEECCCEEE
T ss_pred -----CCEEEcCEEEECCCCCc
Confidence 56899999999999754
No 129
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.73 E-value=1.8e-08 Score=107.74 Aligned_cols=109 Identities=24% Similarity=0.297 Sum_probs=64.2
Q ss_pred HHHHHHHhcCCceeecCC-----Ce-eeecCC-----ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcC---CCC
Q 011458 134 DTMSWFSDHGVELKTEDD-----GR-VFPVSD-----SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDN---AGR 199 (485)
Q Consensus 134 ~~~~~~~~~Gi~~~~~~~-----g~-~~p~~~-----~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~---~~~ 199 (485)
.+++.+++.|++...+.+ |. .+|.+. +.......|...+.+.++ +|++++.|++|..++ ++.
T Consensus 188 ~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL----~V~t~a~V~rIl~d~~~~~~r 263 (583)
T 3qvp_A 188 ALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNL----QVLTGQYVGKVLLSQNGTTPR 263 (583)
T ss_dssp HHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTE----EEECSCEEEEEEEECSSSSCE
T ss_pred HHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCc----EEEcCCEEEEEEeccCCCCCE
Confidence 455667778887643221 11 223221 122233334334455678 999999999998762 134
Q ss_pred eEEEEEeeecCCceEEEEcC-eEEEecCCCch---------h-HHHHHHCCCceecCCC
Q 011458 200 KFLLKVEKRTMNLVECIEAD-YLLIASGSSQQ---------G-HRLAAQLGHSIVDPVP 247 (485)
Q Consensus 200 ~~~V~~~~~~~~~~~~i~ad-~VIlAtG~~~~---------g-~~la~~~G~~i~~~~p 247 (485)
..+|+..+ .++....+.|+ -||+|+|+-++ | -..++++|++++--.|
T Consensus 264 a~GV~~~~-~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP 321 (583)
T 3qvp_A 264 AVGVEFGT-HKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP 321 (583)
T ss_dssp EEEEEEES-STTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC
T ss_pred EEEEEEEe-cCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc
Confidence 56777652 13345678887 59999997543 1 2456778887665445
No 130
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.73 E-value=1e-07 Score=99.91 Aligned_cols=64 Identities=16% Similarity=0.167 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
..++.+.+.+.+++.|| +++++++|+++..++ ++.+.|.+.+...+....+.+|.||+|+|..+
T Consensus 226 d~~~~~~l~~~l~~~Gv----~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 226 DQQMAELVAASMEERGI----PFLRKTVPLSVEKQD-DGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp CHHHHHHHHHHHHHTTC----CEEETEEEEEEEECT-TSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCC----EEEeCCEEEEEEEcC-CCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 35677788889999999 999999999998754 34566776642222345799999999999654
No 131
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.73 E-value=2e-08 Score=104.78 Aligned_cols=138 Identities=23% Similarity=0.247 Sum_probs=77.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
++||+|||||++|+++|+.|++ .|.+|+|+|+..+| |.| .+..+.+...+.... .+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~~g--------G~~--~~~g~~psk~ll~~~-----~~~------ 59 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ--LGLSTAIVEPKYWG--------GVC--LNVGCIPSKALLRNA-----ELV------ 59 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCTT--------HHH--HHHSHHHHHHHHHHH-----HHH------
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCC--------Ccc--cccCchhhHHHHHHH-----HHH------
Confidence 4799999999999999999999 68999999976554 344 121222211111000 000
Q ss_pred CChHHHHHHHHhcCCceeecCCCee-eec----C-CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEE
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRV-FPV----S-DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLL 203 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~-~p~----~-~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V 203 (485)
..+...+...|+. . ...+ ++. . .....+...+.+.+++.|+ +++.++.+. + + .+.+.|
T Consensus 60 ---~~~~~~~~~~g~~---~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv----~~~~g~~~~-i--d--~~~v~V 123 (464)
T 2a8x_A 60 ---HIFTKDAKAFGIS---G-EVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKI----TEIHGYGTF-A--D--ANTLLV 123 (464)
T ss_dssp ---HHHHHHTTTTTEE---E-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC----EEECEEEEE-S--S--SSEEEE
T ss_pred ---HHHHHHHHhcCCC---C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEeEEEE-e--c--CCeEEE
Confidence 0000111222322 0 0000 000 0 0012234456677788899 999887653 2 3 356777
Q ss_pred EEeeecCCceEEEEcCeEEEecCCCc
Q 011458 204 KVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 204 ~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.+.+ +....+.+|.||+|||+.+
T Consensus 124 ~~~~---G~~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 124 DLND---GGTESVTFDNAIIATGSST 146 (464)
T ss_dssp EETT---SCCEEEEEEEEEECCCEEE
T ss_pred EeCC---CceEEEEcCEEEECCCCCC
Confidence 6653 1116899999999999865
No 132
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.73 E-value=6.5e-08 Score=102.26 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=43.0
Q ss_pred CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCC
Q 011458 159 DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 159 ~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
.....+.+.|.+.+ |+ +|+++++|++|..++ +.+.|.+.+ ++.+.||.||+|++..
T Consensus 212 gG~~~l~~~l~~~l---g~----~i~~~~~V~~i~~~~--~~v~v~~~~-----g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 212 GGSGQVSERIMDLL---GD----RVKLERPVIYIDQTR--ENVLVETLN-----HEMYEAKYVISAIPPT 267 (520)
T ss_dssp TCTHHHHHHHHHHH---GG----GEESSCCEEEEECSS--SSEEEEETT-----SCEEEESEEEECSCGG
T ss_pred CCHHHHHHHHHHHc---CC----cEEcCCeeEEEEECC--CeEEEEECC-----CeEEEeCEEEECCCHH
Confidence 34456777776554 78 999999999998764 557787765 5689999999999863
No 133
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.71 E-value=1.3e-08 Score=106.19 Aligned_cols=36 Identities=39% Similarity=0.561 Sum_probs=32.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEe-CCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE-KGKPL 87 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE-~~~~g 87 (485)
++||+|||||++|++||+.|++ .|.+|+|+| ++.+|
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~--~G~~V~liEk~~~~G 40 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK--AKYNVLMADPKGELG 40 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECTTSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCCC
Confidence 5899999999999999999999 689999999 55666
No 134
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.70 E-value=1.6e-08 Score=105.88 Aligned_cols=139 Identities=22% Similarity=0.311 Sum_probs=78.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
++||+|||||++|+++|+.|++ .|.+|+|+|+ ..+| |.| .+..+.+...+.... ..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~~~G--------G~~--~~~g~~psk~l~~~~-----~~------ 61 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ--LGFNTACVEKRGKLG--------GTC--LNVGCIPSKALLNNS-----HL------ 61 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSS--------HHH--HHHSHHHHHHHHHHH-----HH------
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCcC--------Ccc--ceeccHHHHHHHHHH-----HH------
Confidence 5799999999999999999999 6899999997 5565 444 222222211111100 00
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecC-------CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeE
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVS-------DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKF 201 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~-------~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~ 201 (485)
...+...+...|++.. ....++.. .....+...+.+.+++.|| +++.++.+.. + .+.+
T Consensus 62 ---~~~~~~~~~~~gi~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv----~~~~g~~~~~---~--~~~v 126 (478)
T 1v59_A 62 ---FHQMHTEAQKRGIDVN---GDIKINVANFQKAKDDAVKQLTGGIELLFKKNKV----TYYKGNGSFE---D--ETKI 126 (478)
T ss_dssp ---HHHHHHTSGGGTEEEC---SCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC----EEEESEEEES---S--SSEE
T ss_pred ---HHHHHHHHHhcCcccC---CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEEEEEc---c--CCeE
Confidence 0011111222333221 00001000 0011233445566778899 9999987652 3 3567
Q ss_pred EEEEeeecCCceEE------EEcCeEEEecCCCc
Q 011458 202 LLKVEKRTMNLVEC------IEADYLLIASGSSQ 229 (485)
Q Consensus 202 ~V~~~~~~~~~~~~------i~ad~VIlAtG~~~ 229 (485)
.|.+.+ +.... +.+|+||+|||+.+
T Consensus 127 ~V~~~~---G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 127 RVTPVD---GLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp EEECCT---TCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred EEEecC---CCcccccccceEEeCEEEECcCCCC
Confidence 776543 11135 99999999999865
No 135
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.70 E-value=1.2e-07 Score=98.58 Aligned_cols=83 Identities=10% Similarity=0.147 Sum_probs=58.6
Q ss_pred HHHHHHHhcCCceee-cCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCc
Q 011458 134 DTMSWFSDHGVELKT-EDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 212 (485)
Q Consensus 134 ~~~~~~~~~Gi~~~~-~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 212 (485)
++...+...|.++.. +...++.|. ....++.+.+.+.+++.|| +++++++|+++..++ +.+.|.+++
T Consensus 161 E~A~~l~~~g~~Vtlv~~~~~~l~~-~~d~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~--~~v~v~~~~----- 228 (452)
T 3oc4_A 161 EAIDFLVKMKKTVHVFESLENLLPK-YFDKEMVAEVQKSLEKQAV----IFHFEETVLGIEETA--NGIVLETSE----- 228 (452)
T ss_dssp HHHHHHHHTTCEEEEEESSSSSSTT-TCCHHHHHHHHHHHHTTTE----EEEETCCEEEEEECS--SCEEEEESS-----
T ss_pred HHHHHHHhCCCeEEEEEccCccccc-cCCHHHHHHHHHHHHHcCC----EEEeCCEEEEEEccC--CeEEEEECC-----
Confidence 344556666765543 223333331 1246778889999999999 999999999998654 445777653
Q ss_pred eEEEEcCeEEEecCCCc
Q 011458 213 VECIEADYLLIASGSSQ 229 (485)
Q Consensus 213 ~~~i~ad~VIlAtG~~~ 229 (485)
+ ++.+|.||+|+|..+
T Consensus 229 g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 229 Q-EISCDSGIFALNLHP 244 (452)
T ss_dssp C-EEEESEEEECSCCBC
T ss_pred C-EEEeCEEEECcCCCC
Confidence 3 899999999999755
No 136
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.69 E-value=3.1e-08 Score=104.33 Aligned_cols=38 Identities=32% Similarity=0.423 Sum_probs=33.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCC-CCcEEEEeCCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKGKPL 87 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~-g~~V~llE~~~~g 87 (485)
++||+|||||++|++||++|++..+ |.+|+|||+..+|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~G 40 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIG 40 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCcC
Confidence 4799999999999999999999423 8999999976665
No 137
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.68 E-value=5.1e-07 Score=93.82 Aligned_cols=65 Identities=8% Similarity=0.052 Sum_probs=52.3
Q ss_pred eeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEc--CCCCeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 153 RVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSD--NAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 153 ~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~--~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
..||.. ....+.++|.+.+++.|+ +|+++++|++|..+ + +..+.|.++ ++.+.||.||+|+|.++
T Consensus 234 ~~~p~g-G~~~l~~al~~~~~~~G~----~i~~~~~V~~i~~~~~~-~~~~~V~~~------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 234 YLYPMY-GLGELPQGFARLSAIYGG----TYMLDTPIDEVLYKKDT-GKFEGVKTK------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp EEEETT-CTTHHHHHHHHHHHHTTC----EEECSCCCCEEEEETTT-TEEEEEEET------TEEEECSCEEECGGGCG
T ss_pred eEeeCC-CHHHHHHHHHHHHHHcCC----EEECCCEEEEEEEECCC-CeEEEEEEC------CeEEECCEEEECCCccc
Confidence 447754 456899999999999999 99999999999876 5 344566664 57899999999999875
No 138
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.68 E-value=1.5e-07 Score=98.32 Aligned_cols=94 Identities=22% Similarity=0.333 Sum_probs=65.6
Q ss_pred HHHHhc-CCceeec-CCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceE
Q 011458 137 SWFSDH-GVELKTE-DDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVE 214 (485)
Q Consensus 137 ~~~~~~-Gi~~~~~-~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~ 214 (485)
..+... |..+..- ...++.|. .....+.+.+.+.+++.|| +++++++|+++..++ +.+.|.+.+ ++
T Consensus 176 ~~l~~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~--~~v~v~~~~-----g~ 243 (472)
T 3iwa_A 176 VSLADMWGIDTTVVELADQIMPG-FTSKSLSQMLRHDLEKNDV----VVHTGEKVVRLEGEN--GKVARVITD-----KR 243 (472)
T ss_dssp HHHHHHHCCEEEEECSSSSSSTT-TSCHHHHHHHHHHHHHTTC----EEECSCCEEEEEESS--SBEEEEEES-----SC
T ss_pred HHHHHhcCCcEEEEEccCccccc-ccCHHHHHHHHHHHHhcCC----EEEeCCEEEEEEccC--CeEEEEEeC-----CC
Confidence 344455 6554432 22333331 2246778888999999999 999999999998754 556677765 56
Q ss_pred EEEcCeEEEecCCCchhHHHHHHCCCcee
Q 011458 215 CIEADYLLIASGSSQQGHRLAAQLGHSIV 243 (485)
Q Consensus 215 ~i~ad~VIlAtG~~~~g~~la~~~G~~i~ 243 (485)
++.+|.||+|+|..+.. .+++.+|+++.
T Consensus 244 ~i~aD~Vv~a~G~~p~~-~l~~~~gl~~~ 271 (472)
T 3iwa_A 244 TLDADLVILAAGVSPNT-QLARDAGLELD 271 (472)
T ss_dssp EEECSEEEECSCEEECC-HHHHHHTCCBC
T ss_pred EEEcCEEEECCCCCcCH-HHHHhCCccCC
Confidence 89999999999987642 36677787653
No 139
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.67 E-value=5e-08 Score=102.58 Aligned_cols=74 Identities=8% Similarity=0.041 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHH-HHHCC
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRL-AAQLG 239 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G 239 (485)
..++.+.+.+.+++. | +++++++|+++..++ +.+.+.+.+ .+++..++.+|.||+|+|..+....+ ++.+|
T Consensus 214 d~~~~~~l~~~l~~~-V----~i~~~~~v~~i~~~~--~~v~v~~~~-~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g 285 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-F----YFDAKARVISTIEKE--DAVEVIYFD-KSGQKTTESFQYVLAATGRKANVDKLGLENTS 285 (492)
T ss_dssp CHHHHHHHHHHHHTT-S----EEETTCEEEEEEECS--SSEEEEEEC-TTCCEEEEEESEEEECSCCEESCSSSCGGGSC
T ss_pred CHHHHHHHHHHHhhC-c----EEEECCEEEEEEEcC--CEEEEEEEe-CCCceEEEECCEEEEeeCCccCCCCCChhhcC
Confidence 356777888888877 9 999999999998764 456666541 12223689999999999976532111 34455
Q ss_pred Cce
Q 011458 240 HSI 242 (485)
Q Consensus 240 ~~i 242 (485)
+++
T Consensus 286 l~~ 288 (492)
T 3ic9_A 286 IEL 288 (492)
T ss_dssp CCB
T ss_pred CEE
Confidence 543
No 140
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.67 E-value=1.7e-07 Score=96.09 Aligned_cols=69 Identities=22% Similarity=0.176 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCc
Q 011458 162 SSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 241 (485)
Q Consensus 162 ~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~ 241 (485)
..+.+.+.+.+++.|| +++++++|+++..++ ....|.+.+ ++++.+|.||+|+|..+. ..+++.+|++
T Consensus 185 ~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~--~~~~v~~~d-----g~~i~aD~Vv~a~G~~p~-~~l~~~~gl~ 252 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGV----QVELGTGVVGFSGEG--QLEQVMASD-----GRSFVADSALICVGAEPA-DQLARQAGLA 252 (410)
T ss_dssp HHHHHHHHHHHHHHTC----EEECSCCEEEEECSS--SCCEEEETT-----SCEEECSEEEECSCEEEC-CHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCC----EEEeCCEEEEEeccC--cEEEEEECC-----CCEEEcCEEEEeeCCeec-HHHHHhCCCc
Confidence 4567788888999999 999999999998653 555777765 678999999999998764 3467888876
Q ss_pred e
Q 011458 242 I 242 (485)
Q Consensus 242 i 242 (485)
+
T Consensus 253 ~ 253 (410)
T 3ef6_A 253 C 253 (410)
T ss_dssp B
T ss_pred c
Confidence 5
No 141
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.66 E-value=7.1e-08 Score=101.29 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=31.3
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
+.+|||+|||||++|++||+.|++ .|.+|+|+|+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~--~G~~V~liEk 37 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQ--LGKKVAVADY 37 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEEe
Confidence 356899999999999999999999 6899999996
No 142
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.66 E-value=5e-08 Score=101.98 Aligned_cols=138 Identities=21% Similarity=0.270 Sum_probs=78.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHh
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFF 127 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l 127 (485)
.++||+|||||++|++||+.|++ .|.+|+|+|+. .+| |.| .+..+.+...+.. ..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~liE~~~~~G--------G~~--~~~g~~Psk~l~~-----------~~- 60 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQ--LGFKTVCIEKNETLG--------GTC--LNVGCIPSKALLN-----------NS- 60 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSSSS--------HHH--HHHSHHHHHHHHH-----------HH-
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCcC--------Ccc--cccCccchHHHHH-----------HH-
Confidence 46899999999999999999999 68999999976 565 445 2222222111110 00
Q ss_pred hcCChHHHHH--HHHhcCCceeecCCCeeeecC---CC----hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCC
Q 011458 128 SLHGPMDTMS--WFSDHGVELKTEDDGRVFPVS---DS----SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAG 198 (485)
Q Consensus 128 ~~~~~~~~~~--~~~~~Gi~~~~~~~g~~~p~~---~~----a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~ 198 (485)
...+... .+...|++.. ...++.. .. ...+...+.+.+++.|+ +++.++.+ .+ +.
T Consensus 61 ---~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv----~~~~g~~~-~~--~~-- 124 (474)
T 1zmd_A 61 ---HYYHMAHGTDFASRGIEMS----EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKV----VHVNGYGK-IT--GK-- 124 (474)
T ss_dssp ---HHHHHHHSSHHHHTTEEES----CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC----EEEESEEE-EE--ET--
T ss_pred ---HHHHHhhhhhHhhCccccC----CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEEEE-Ee--cC--
Confidence 0001111 2334454311 0111000 00 11122334566778899 99998653 23 32
Q ss_pred CeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 199 RKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 199 ~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+.+.|.+.+ ++..++.+|+||+|||+.+
T Consensus 125 ~~~~v~~~~---gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 125 NQVTATKAD---GGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp TEEEEECTT---SCEEEEEEEEEEECCCEEE
T ss_pred CEEEEEecC---CCcEEEEeCEEEECCCCCC
Confidence 556666532 1135799999999999854
No 143
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.66 E-value=1.1e-07 Score=98.89 Aligned_cols=65 Identities=12% Similarity=0.099 Sum_probs=51.6
Q ss_pred eeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEE-cCCCCeEEEEEeeecCCceEEEEcCeEEEecCCC
Q 011458 153 RVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASS-DNAGRKFLLKVEKRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 153 ~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~-~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
..||... ...+.++|.+.+++.|+ +|+++++|++|.. ++ +..++|++.+ ++.+.||.||.|+|-.
T Consensus 248 ~~yp~gG-~~~L~~aL~r~~~~~Gg----~i~l~t~V~~I~~d~~-g~v~gV~~~~-----G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 248 FIYPLYG-LGGIPEGFSRMCAINGG----TFMLNKNVVDFVFDDD-NKVCGIKSSD-----GEIAYCDKVICDPSYV 313 (475)
T ss_dssp EEEETTC-TTHHHHHHHHHHHHC------CEESSCCEEEEEECTT-SCEEEEEETT-----SCEEEEEEEEECGGGC
T ss_pred eEEECCC-HHHHHHHHHHHHHHcCC----EEEeCCeEEEEEEecC-CeEEEEEECC-----CcEEECCEEEECCCcc
Confidence 4577655 46789999999999999 9999999999998 43 4567888875 5689999999999854
No 144
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.65 E-value=3.5e-09 Score=106.11 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=31.2
Q ss_pred CcEEEECcchHHHHHHHHHhccC----CCCcEEEEeCCCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVA----PKLNVVIIEKGKPL 87 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~----~g~~V~llE~~~~g 87 (485)
+||+|||||++|+++|++|++++ ++.+|+|||+..++
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 48999999999999999999943 23899999976543
No 145
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.65 E-value=4.1e-08 Score=102.43 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=33.5
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (485)
..+||+|||||++|++||++|++ .|.+|+|+|+..+|
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~G 39 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVE--QGAQVTLIERGTIG 39 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCCCC
Confidence 35899999999999999999999 68999999987766
No 146
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.65 E-value=3.5e-09 Score=107.55 Aligned_cols=138 Identities=15% Similarity=0.179 Sum_probs=80.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CC---CcceeecCCCceeccCCCCcchHHHh-hccCCCCccchhh
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KP---LSKVKISGGGRCNVTNGHCADKMILA-GHYPRGHKEFRGS 125 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~---g~k~~~sG~g~~n~tn~~~~~~~~~~-~~~~~~~~~~~~~ 125 (485)
.||+|||||++|+++|+.|++.++|.+|+|+|+. .+ |..+.+++++... .... .+. +. + +
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~-----~~~~-~~~~~~-----~-~--- 65 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQH-----PANP-LSYLDA-----P-E--- 65 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTC-----TTCG-GGGSSC-----G-G---
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHh-----hcCc-chhhhh-----h-H---
Confidence 4899999999999999999994348999999964 34 4455555443220 0000 000 00 0 0
Q ss_pred HhhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEE
Q 011458 126 FFSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKV 205 (485)
Q Consensus 126 ~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~ 205 (485)
...+.+.+...++. .|..+. ...+..|+ ......+.+.|.+.+.+.|+ +++++++|++++..
T Consensus 66 -~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~-~~~r~~l~~~L~~~~~~~gv----~i~~~~~v~~i~~~---------- 127 (381)
T 3c4a_A 66 -RLNPQFLEDFKLVH-HNEPSL-MSTGVLLC-GVERRGLVHALRDKCRSQGI----AIRFESPLLEHGEL---------- 127 (381)
T ss_dssp -GGCCEEECCEEEEE-SSSEEE-CCCCSCEE-EEEHHHHHHHHHHHHHHTTC----EEETTCCCCSGGGC----------
T ss_pred -HHhhccccceEEEe-CCeeEE-ecCCCcee-eecHHHHHHHHHHHHHHCCC----EEEeCCEeccchhc----------
Confidence 00000000000000 121111 11122222 23457889999999999999 99999999877421
Q ss_pred eeecCCceEEEEcCeEEEecCCCc
Q 011458 206 EKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 206 ~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
. .+.||.||.|+|..+
T Consensus 128 ~--------~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 128 P--------LADYDLVVLANGVNH 143 (381)
T ss_dssp C--------GGGCSEEEECCGGGG
T ss_pred c--------cccCCEEEECCCCCc
Confidence 0 146999999999866
No 147
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.65 E-value=5.1e-08 Score=102.51 Aligned_cols=32 Identities=31% Similarity=0.456 Sum_probs=29.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhc-cCCCCcEEEEe
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKT-VAPKLNVVIIE 82 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~-~~~g~~V~llE 82 (485)
.++||+|||||++|++||++|++ . |++|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH--KKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc--CCEEEEEe
Confidence 35899999999999999999998 5 68999999
No 148
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.64 E-value=1.4e-07 Score=102.74 Aligned_cols=76 Identities=9% Similarity=0.180 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHHHHCC---CCCccEEEeCceEEEEEEcC------CCCeEEEEEeee----------------------
Q 011458 160 SSSSVIDCLLTEAKHRG---VAPSVVLQTGKVVTTASSDN------AGRKFLLKVEKR---------------------- 208 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~G---V~~~~~i~~~~~V~~i~~~~------~~~~~~V~~~~~---------------------- 208 (485)
....+.+.|.+.+.+.| + +++++++|++++.++ ++..++|++.+.
T Consensus 117 ~q~~le~~L~~~~~~~g~~~v----~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (665)
T 1pn0_A 117 HQGRIERRILDSIAEISDTRI----KVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSN 192 (665)
T ss_dssp CHHHHHHHHHHHHHHHHTTSS----CEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCH
T ss_pred eHHHHHHHHHHHHHhcCCCce----EEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccccc
Confidence 45677788889998887 8 999999999998753 013466655431
Q ss_pred -----------------cCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 209 -----------------TMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 209 -----------------~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
.++..++++||.||.|+|+.+. +.+.+|++.
T Consensus 193 l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~---VR~~lg~~~ 240 (665)
T 1pn0_A 193 LQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSW---VRRTLGFEM 240 (665)
T ss_dssp HHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCH---HHHHHTCCC
T ss_pred ccccccccccccccccCCCCceEEEEeCEEEeccCCCCH---HHHhcCCCC
Confidence 1223368999999999998873 455567653
No 149
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.64 E-value=1.1e-07 Score=99.19 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 227 (485)
...+.+.|.+.+.+ + +|+++++|++|..++ +.+.|++.+ + .+.||.||+|++.
T Consensus 235 ~~~l~~~l~~~l~~--~----~i~~~~~V~~i~~~~--~~~~v~~~~-----g-~~~ad~vV~a~p~ 287 (475)
T 3lov_A 235 LESLIERLEEVLER--S----EIRLETPLLAISRED--GRYRLKTDH-----G-PEYADYVLLTIPH 287 (475)
T ss_dssp HHHHHHHHHHHCSS--C----EEESSCCCCEEEEET--TEEEEECTT-----C-CEEESEEEECSCH
T ss_pred HHHHHHHHHhhccC--C----EEEcCCeeeEEEEeC--CEEEEEECC-----C-eEECCEEEECCCH
Confidence 44556666555443 7 999999999998875 668888764 4 7999999999985
No 150
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.62 E-value=6.1e-08 Score=102.47 Aligned_cols=39 Identities=15% Similarity=0.406 Sum_probs=34.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCC-CcEEEEe-CCCCCcce
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIE-KGKPLSKV 90 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g-~~V~llE-~~~~g~k~ 90 (485)
.+||+|||||++||+||+.|++ .| .+|+||| ++.+|+.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~--~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQ--NGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHH--TTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--cCCCCEEEEeCCCCCCCce
Confidence 5799999999999999999999 68 9999999 56788654
No 151
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=1.1e-07 Score=99.11 Aligned_cols=37 Identities=30% Similarity=0.457 Sum_probs=33.3
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (485)
.++||+|||||++|++||..|++ .|.+|+|+|++.+|
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~G 40 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ--LGIPTVLVEGQALG 40 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--HTCCEEEECSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCEEEEEccCCCC
Confidence 35899999999999999999999 58999999986665
No 152
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.61 E-value=4.5e-08 Score=101.77 Aligned_cols=35 Identities=34% Similarity=0.415 Sum_probs=32.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (485)
+||+|||||++|++||+.|++ .|.+|+|+|+. .+|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~~G 37 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ--LGMKVGVVEKEKALG 37 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSS
T ss_pred CCEEEECCChhHHHHHHHHHH--CCCeEEEEeCCCCCC
Confidence 799999999999999999999 68999999976 665
No 153
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.57 E-value=1.6e-07 Score=100.89 Aligned_cols=118 Identities=19% Similarity=0.255 Sum_probs=73.5
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
.+.+||+|||||++|++||++|++.+++.+|+|+|+.. .+- ..|. +.....
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~-------~~~~-----------lp~~~~---------- 85 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF-------ANCG-----------LPYYIG---------- 85 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB-------CGGG-----------HHHHHT----------
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc-------cCCC-----------Cchhhc----------
Confidence 34579999999999999999999965589999999653 220 0000 000000
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEe
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVE 206 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~ 206 (485)
+.+.+ ....+...+...+++.++ +++++++|+++..++ +.+.+...
T Consensus 86 -------------------------g~~~~---~~~~~~~~~~~~~~~~gi----~v~~~~~V~~id~~~--~~v~v~~~ 131 (588)
T 3ics_A 86 -------------------------GVITE---RQKLLVQTVERMSKRFNL----DIRVLSEVVKINKEE--KTITIKNV 131 (588)
T ss_dssp -------------------------TSSCC---GGGGBSSCHHHHHHHTTC----EEECSEEEEEEETTT--TEEEEEET
T ss_pred -------------------------CcCCC---hHHhhccCHHHHHHhcCc----EEEECCEEEEEECCC--CEEEEeec
Confidence 00000 000011123334467789 999999999998764 55665541
Q ss_pred eecCCceEEEEcCeEEEecCCCc
Q 011458 207 KRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
..+....+.+|+||+|||+.+
T Consensus 132 --~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 132 --TTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp --TTCCEEEEECSEEEECCCEEE
T ss_pred --CCCCEEEEeCCEEEECCCCCC
Confidence 112234789999999999754
No 154
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.57 E-value=2e-07 Score=99.49 Aligned_cols=94 Identities=21% Similarity=0.298 Sum_probs=64.1
Q ss_pred HHHHHhcCCceee-cCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEc------------------C
Q 011458 136 MSWFSDHGVELKT-EDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSD------------------N 196 (485)
Q Consensus 136 ~~~~~~~Gi~~~~-~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~------------------~ 196 (485)
...+...|.++.. +...++.| .....+.+.+.+.+++.|| ++++++.|+++..+ +
T Consensus 167 A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 240 (565)
T 3ntd_A 167 MESLHHLGIKTTLLELADQVMT--PVDREMAGFAHQAIRDQGV----DLRLGTALSEVSYQVQTHVASDAAGEDTAHQHI 240 (565)
T ss_dssp HHHHHHTTCEEEEEESSSSSCT--TSCHHHHHHHHHHHHHTTC----EEEETCCEEEEEEECCCCCCCGGGTCCCTTCCT
T ss_pred HHHHHhcCCcEEEEEcCCccch--hcCHHHHHHHHHHHHHCCC----EEEeCCeEEEEeccccccccccccccccccccC
Confidence 3344555655432 22233443 2346777888889999999 99999999999863 2
Q ss_pred CCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 197 AGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 197 ~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
++.+.+.+.+ ++.+.+|.||+|+|..+.. .+++.+|+.+
T Consensus 241 -~~~~~v~~~~-----g~~i~~D~vi~a~G~~p~~-~l~~~~g~~~ 279 (565)
T 3ntd_A 241 -KGHLSLTLSN-----GELLETDLLIMAIGVRPET-QLARDAGLAI 279 (565)
T ss_dssp -TCEEEEEETT-----SCEEEESEEEECSCEEECC-HHHHHHTCCB
T ss_pred -CCcEEEEEcC-----CCEEEcCEEEECcCCccch-HHHHhCCccc
Confidence 3556666654 5689999999999977652 3566667654
No 155
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.57 E-value=3.8e-07 Score=95.42 Aligned_cols=59 Identities=12% Similarity=0.075 Sum_probs=43.6
Q ss_pred CChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC
Q 011458 159 DSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 159 ~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 227 (485)
.....+.+.|.+.+.+ . +|+++++|++|..++ +.+.|++.+ .++...++||.||+|+..
T Consensus 236 gG~~~l~~~l~~~l~~--~----~i~~~~~V~~i~~~~--~~v~v~~~~--g~~~~~~~ad~vI~a~p~ 294 (489)
T 2jae_A 236 GGMDRIYYAFQDRIGT--D----NIVFGAEVTSMKNVS--EGVTVEYTA--GGSKKSITADYAICTIPP 294 (489)
T ss_dssp TCTTHHHHHHHHHHCG--G----GEETTCEEEEEEEET--TEEEEEEEE--TTEEEEEEESEEEECSCH
T ss_pred CCHHHHHHHHHHhcCC--C----eEEECCEEEEEEEcC--CeEEEEEec--CCeEEEEECCEEEECCCH
Confidence 3456677888776643 6 899999999998875 678787764 011267999999999973
No 156
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.57 E-value=1e-07 Score=100.22 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=29.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhc-cCCCCcEEEEe
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKT-VAPKLNVVIIE 82 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~-~~~g~~V~llE 82 (485)
+++||+|||||++|++||+.|++ . |++|+|+|
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~--G~~V~liE 38 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY--GKRVAVVD 38 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH--CCCEEEEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhc--CCeEEEEe
Confidence 35899999999999999999998 5 68999999
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.56 E-value=3.1e-08 Score=103.38 Aligned_cols=36 Identities=36% Similarity=0.467 Sum_probs=32.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPL 87 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g 87 (485)
++||+|||||++|++||..|++ .|.+|+|+|+...|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~--~g~~V~lie~~~~G 41 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ--LGLKVLAVEAGEVG 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCCCC
Confidence 4899999999999999999999 68999999977655
No 158
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.54 E-value=6.6e-07 Score=91.71 Aligned_cols=39 Identities=18% Similarity=0.376 Sum_probs=34.1
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCC-CcEEEEeC-CCCCcc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEK-GKPLSK 89 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g-~~V~llE~-~~~g~k 89 (485)
+.+||+|||||++|++||+.|++ .| .+|+|+|+ +.+|+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~--~g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ--AGFHDYTILERTDHVGGK 45 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSSCSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEECCCCCCCc
Confidence 45799999999999999999999 68 89999995 577753
No 159
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.53 E-value=8e-07 Score=91.73 Aligned_cols=71 Identities=20% Similarity=0.209 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEE--cCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHC
Q 011458 161 SSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASS--DNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQL 238 (485)
Q Consensus 161 a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~--~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~ 238 (485)
...+.+.+.+.+++.|| +++++++|+++.. ++ +....|.+.+ +..+.+|.||+|+|..+. ..+++.+
T Consensus 190 ~~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~~~-~~v~~v~~~~-----G~~i~~D~Vv~a~G~~p~-~~l~~~~ 258 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGV----DIRTGTQVCGFEMSTDQ-QKVTAVLCED-----GTRLPADLVIAGIGLIPN-CELASAA 258 (431)
T ss_dssp CHHHHHHHHHHHHHHTC----EEECSCCEEEEEECTTT-CCEEEEEETT-----SCEEECSEEEECCCEEEC-CHHHHHT
T ss_pred hHHHHHHHHHHHHhCCe----EEEeCCEEEEEEeccCC-CcEEEEEeCC-----CCEEEcCEEEECCCCCcC-cchhhcc
Confidence 35677888889999999 9999999999986 43 3444677765 578999999999997654 2467778
Q ss_pred CCce
Q 011458 239 GHSI 242 (485)
Q Consensus 239 G~~i 242 (485)
|+.+
T Consensus 259 gl~~ 262 (431)
T 1q1r_A 259 GLQV 262 (431)
T ss_dssp TCCB
T ss_pred CCCC
Confidence 8765
No 160
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.51 E-value=3.4e-07 Score=95.86 Aligned_cols=36 Identities=36% Similarity=0.532 Sum_probs=31.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
++||+|||||++|++||+.|++.+++.+|+|+|+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 71 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE 71 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 469999999999999999999854589999999754
No 161
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.51 E-value=6.9e-07 Score=92.40 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=33.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSK 89 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k 89 (485)
.+||+|||||++|++||+.|++ .|.+|+|+|+ +.+|+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRK--AGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECCCCCCCc
Confidence 5799999999999999999999 6899999995 567754
No 162
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.50 E-value=1.7e-07 Score=97.29 Aligned_cols=36 Identities=36% Similarity=0.633 Sum_probs=31.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
++||+|||||++|++||+.|++.+++.+|+|+|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 479999999999999999999965588999999653
No 163
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.50 E-value=6.3e-07 Score=98.16 Aligned_cols=57 Identities=11% Similarity=0.165 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCch
Q 011458 164 VIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 164 v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
+...+.+.+++.|| +++++++|++|..+ ...+... ..+.+.++.+|.||+|+|..+.
T Consensus 569 ~~~~l~~~l~~~GV----~i~~~~~V~~i~~~----~~~v~~~--~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 569 EVNRIQRRLIENGV----ARVTDHAVVAVGAG----GVTVRDT--YASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp CHHHHHHHHHHTTC----EEEESEEEEEEETT----EEEEEET--TTCCEEEEECSEEEEESCEEEC
T ss_pred hHHHHHHHHHHCCC----EEEcCcEEEEEECC----eEEEEEc--cCCeEEEEECCEEEECCCCCCC
Confidence 35677888899999 99999999999743 2344321 1223678999999999997553
No 164
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.49 E-value=8.4e-08 Score=90.04 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=32.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (485)
+++||+||||||+||+||+.|++ .|++|+||||. .+|
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~--~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRGSG 38 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCC
Confidence 45899999999999999999999 78999999965 565
No 165
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.49 E-value=1.9e-06 Score=92.20 Aligned_cols=36 Identities=42% Similarity=0.561 Sum_probs=31.4
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+||+||||||.||+.+|..|++. ++.+|+|||++
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~-~~~~VLllEaG 39 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAG 39 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTS-TTSCEEEECSS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecC
Confidence 3469999999999999999999983 34799999965
No 166
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.47 E-value=5.5e-07 Score=94.54 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=70.5
Q ss_pred CCCcEEEECcchHHHHHHHHHhccC-CCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhH
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVA-PKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSF 126 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~-~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~ 126 (485)
+.+||+|||||++|+++|..|++.+ ++.+|+|+|+.. ++ .-.|.+. .+.. .. .
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~-------~~~~~~~--------~~~~----~~--~---- 88 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS-------FLGAGMA--------LWIG----EQ--I---- 88 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS-------BCGGGHH--------HHHT----TS--S----
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC-------ccccccc--------hhhc----Cc--c----
Confidence 3589999999999999999999842 348999999653 32 1111000 0000 00 0
Q ss_pred hhcCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEe
Q 011458 127 FSLHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVE 206 (485)
Q Consensus 127 l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~ 206 (485)
..+.+ ..++ +.+.+++.|+ +++.+++|+.+..++ +.+.+..+
T Consensus 89 ---~~~~~------------------~~~~-----------~~~~~~~~gv----~v~~~~~v~~i~~~~--~~v~v~~~ 130 (490)
T 2bc0_A 89 ---AGPEG------------------LFYS-----------DKEELESLGA----KVYMESPVQSIDYDA--KTVTALVD 130 (490)
T ss_dssp ---SCSGG------------------GBSC-----------CHHHHHHTTC----EEETTCCEEEEETTT--TEEEEEET
T ss_pred ---CCHHH------------------hhhc-----------CHHHHHhCCC----EEEeCCEEEEEECCC--CEEEEEeC
Confidence 00000 0000 1233456799 999999999997654 55555421
Q ss_pred eecCCceEEEEcCeEEEecCCCc
Q 011458 207 KRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+.+.++.+|+||+|||+.+
T Consensus 131 ----g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 131 ----GKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp ----TEEEEEECSEEEECCCEEE
T ss_pred ----CcEEEEECCEEEECCCCCc
Confidence 1146799999999999754
No 167
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.46 E-value=2.3e-07 Score=94.24 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=30.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+||+|||||++|++||..|++.+...+|+|+|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 57999999999999999999995434679999965
No 168
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.46 E-value=3.8e-07 Score=94.70 Aligned_cols=116 Identities=19% Similarity=0.223 Sum_probs=71.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
+||+|||||++|++||..|++.+++.+|+|+|+.. ++ ...|.+. .|.... + ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~-------~~~~~~~------------~~~~g~--~-----~~ 54 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS-------FLSCGIA------------LYLGKE--I-----KN 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC-------BCGGGHH------------HHHTTC--B-----GG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC-------cccccch------------hhhcCC--c-----cc
Confidence 58999999999999999999854589999999753 32 1111000 000000 0 00
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+.+.+ ..+ .+.+.+.+.|+ +++.+++|+.+..++ +.+.+... .
T Consensus 55 ~~~~~------------------~~~-----------~~~~~~~~~gv----~~~~~~~v~~i~~~~--~~v~v~~~--~ 97 (452)
T 2cdu_A 55 NDPRG------------------LFY-----------SSPEELSNLGA----NVQMRHQVTNVDPET--KTIKVKDL--I 97 (452)
T ss_dssp GCGGG------------------GBS-----------CCHHHHHHTTC----EEEESEEEEEEEGGG--TEEEEEET--T
T ss_pred CCHHH------------------hhh-----------cCHHHHHHcCC----EEEeCCEEEEEEcCC--CEEEEEec--C
Confidence 00000 000 11233456799 999999999997664 55555431 1
Q ss_pred CCceEEEEcCeEEEecCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~ 229 (485)
++.+..+.+|.||+|||+.+
T Consensus 98 ~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 98 TNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp TCCEEEEECSEEEECCCEEE
T ss_pred CCceEEEECCEEEEccCCCc
Confidence 12246799999999999754
No 169
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.45 E-value=2.4e-07 Score=96.07 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=31.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
+||+|||||++|++||..|++.+++.+|+|+|+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 48999999999999999999854589999999753
No 170
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.43 E-value=2.2e-06 Score=88.48 Aligned_cols=65 Identities=14% Similarity=0.122 Sum_probs=51.7
Q ss_pred eeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCc
Q 011458 153 RVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 153 ~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
..||... ...+.++|.+.+++.|+ +|+++++|++|..++ ++...|.+ + ++.+.||.||+|+|..+
T Consensus 226 ~~~p~gG-~~~l~~~l~~~~~~~G~----~i~~~~~V~~I~~~~-~~v~~v~~-~-----g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 226 YLYPLYG-LGELPQGFARLSAIYGG----TYMLNKPVDDIIMEN-GKVVGVKS-E-----GEVARCKQLICDPSYVP 290 (433)
T ss_dssp EEEETTC-TTHHHHHHHHHHHHHTC----CCBCSCCCCEEEEET-TEEEEEEE-T-----TEEEECSEEEECGGGCG
T ss_pred EEEeCcC-HHHHHHHHHHHHHHcCC----EEECCCEEEEEEEeC-CEEEEEEE-C-----CeEEECCEEEECCCCCc
Confidence 4577554 67899999999999999 999999999998765 33334554 3 57899999999999765
No 171
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.38 E-value=8.7e-07 Score=95.78 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=31.5
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
..+||+|||||++|+++|+.|++ .|++|+|||+..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~--~G~~V~liE~~~ 79 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVG--AGYKVAMFDIGE 79 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSC
T ss_pred ccCCEEEECCcHHHHHHHHHHHh--CCCcEEEEeccC
Confidence 45899999999999999999999 789999999754
No 172
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.37 E-value=8.8e-06 Score=85.87 Aligned_cols=35 Identities=40% Similarity=0.589 Sum_probs=31.1
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+||+||||||++|+.+|..|++. ++.+|+|||++
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~-~~~~VLvLEaG 50 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED-PDSRVLLIEAG 50 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSS
T ss_pred CCeeEEEECccHHHHHHHHHHHhC-CCCeEEEEcCC
Confidence 479999999999999999999974 57899999965
No 173
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=3.9e-07 Score=92.08 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=29.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
.||+|||||++|++||..|++ .| +|+|+|+..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~--~g-~V~lie~~~ 40 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQ--TY-EVTVIDKEP 40 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TS-EEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhh--cC-CEEEEECCC
Confidence 599999999999999999988 57 999999754
No 174
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.37 E-value=1.8e-06 Score=90.55 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=34.3
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcce
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSKV 90 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k~ 90 (485)
..+||+|||||++|++||+.|++ .|.+|+|||+ +.+|+.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~--~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG--AGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH--HTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCCCCce
Confidence 35799999999999999999999 6899999994 5677543
No 175
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.36 E-value=4.9e-06 Score=85.12 Aligned_cols=91 Identities=19% Similarity=0.244 Sum_probs=61.8
Q ss_pred HHHHHHhcCCceee-cCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCce
Q 011458 135 TMSWFSDHGVELKT-EDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLV 213 (485)
Q Consensus 135 ~~~~~~~~Gi~~~~-~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~ 213 (485)
+...+.+.|.++.. +...++.|. .....+.+.+.+.+++.|| +++++++|+++. + + .|.+.+ +
T Consensus 160 ~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~~l~~~l~~~GV----~i~~~~~v~~i~--~--~--~v~~~~-----g 223 (408)
T 2gqw_A 160 LAATARTAGVHVSLVETQPRLMSR-AAPATLADFVARYHAAQGV----DLRFERSVTGSV--D--G--VVLLDD-----G 223 (408)
T ss_dssp HHHHHHHTTCEEEEEESSSSSSTT-TSCHHHHHHHHHHHHHTTC----EEEESCCEEEEE--T--T--EEEETT-----S
T ss_pred HHHHHHhCCCEEEEEEeCCccccc-ccCHHHHHHHHHHHHHcCc----EEEeCCEEEEEE--C--C--EEEECC-----C
Confidence 33445555655442 222233331 1235677888899999999 999999999997 3 3 566654 5
Q ss_pred EEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 214 ECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 214 ~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
.++.+|.||+|+|..+. ..+++.+|+++
T Consensus 224 ~~i~~D~vi~a~G~~p~-~~l~~~~gl~~ 251 (408)
T 2gqw_A 224 TRIAADMVVVGIGVLAN-DALARAAGLAC 251 (408)
T ss_dssp CEEECSEEEECSCEEEC-CHHHHHHTCCB
T ss_pred CEEEcCEEEECcCCCcc-HHHHHhCCCCC
Confidence 68999999999997664 24677777664
No 176
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.36 E-value=1.7e-06 Score=90.26 Aligned_cols=57 Identities=21% Similarity=0.222 Sum_probs=44.5
Q ss_pred ChHHHHHHHHHHHHHC--------CCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCC
Q 011458 160 SSSSVIDCLLTEAKHR--------GVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGS 227 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~--------GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~ 227 (485)
....+.+.|.+.+.+. |+ +|+++++|++|..++ +.+.|++.+ +.+++||.||+|++.
T Consensus 204 G~~~l~~~l~~~l~~~~~~~~~i~~~----~i~~~~~V~~i~~~~--~~v~v~~~~-----g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 204 GYEAVVYYLAGQYLKTDDKSGKIVDP----RLQLNKVVREIKYSP--GGVTVKTED-----NSVYSADYVMVSASL 268 (472)
T ss_dssp CTTHHHHHHHHTTSCBCTTTCCBCCT----TEESSCCEEEEEECS--SCEEEEETT-----SCEEEESEEEECSCH
T ss_pred cHHHHHHHHHHhcccccccccccccc----EEEcCCEEEEEEEcC--CcEEEEECC-----CCEEEcCEEEEecCH
Confidence 3456777777766554 67 899999999998875 557788765 568999999999984
No 177
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.35 E-value=1.5e-06 Score=92.51 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=31.5
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+||||+|++|+.+|..|++ .|.+|+|||++
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~--~g~~VlvlE~g 39 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSE--AGKKVLLLERG 39 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CceeEEEECcCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 46899999999999999999999 68999999965
No 178
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.34 E-value=2e-06 Score=88.94 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=69.3
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLHG 131 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 131 (485)
+|+|||||++|++||..|++.++..+|+|+|++... +..+|.+. .+..... ... .
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~------~~~~~~l~--------~~~~~~~---~~~--~------ 56 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM------SFANCALP--------YVIGEVV---EDR--R------ 56 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS------SBCGGGHH--------HHHTTSS---CCG--G------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC------CCCcchhH--------HHHcCCc---cch--h------
Confidence 599999999999999999986656789999975311 01222110 0000000 000 0
Q ss_pred hHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCC
Q 011458 132 PMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMN 211 (485)
Q Consensus 132 ~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~ 211 (485)
.... .... +..++.++ +++.+++|+.|..+. ..+.+... ..+
T Consensus 57 ---------------------~~~~--~~~~-------~~~~~~~i----~~~~~~~V~~id~~~--~~~~~~~~--~~~ 98 (437)
T 4eqs_A 57 ---------------------YALA--YTPE-------KFYDRKQI----TVKTYHEVIAINDER--QTVSVLNR--KTN 98 (437)
T ss_dssp ---------------------GTBC--CCHH-------HHHHHHCC----EEEETEEEEEEETTT--TEEEEEET--TTT
T ss_pred ---------------------hhhh--cCHH-------HHHHhcCC----EEEeCCeEEEEEccC--cEEEEEec--cCC
Confidence 0000 0011 12345688 999999999997653 44444432 223
Q ss_pred ceEEEEcCeEEEecCCCc
Q 011458 212 LVECIEADYLLIASGSSQ 229 (485)
Q Consensus 212 ~~~~i~ad~VIlAtG~~~ 229 (485)
.+..+.+|++|+|||+.+
T Consensus 99 ~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 99 EQFEESYDKLILSPGASA 116 (437)
T ss_dssp EEEEEECSEEEECCCEEE
T ss_pred ceEEEEcCEEEECCCCcc
Confidence 356799999999999865
No 179
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.33 E-value=1.3e-06 Score=94.11 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=31.2
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
...+||+|||||+||++||..|++ .|.+|+|+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~--~g~~v~liE~ 138 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAK--YGAKTAVLDY 138 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECC
T ss_pred cccccEEEECCCccHHHHHHHHHh--CCCeEEEEec
Confidence 346899999999999999999999 6899999996
No 180
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.33 E-value=1.7e-06 Score=90.95 Aligned_cols=69 Identities=20% Similarity=0.310 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCc
Q 011458 162 SSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 241 (485)
Q Consensus 162 ~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~ 241 (485)
..+...+.+.+++.|| +++++++|+++..++ +.+.|.+.+ +.++.+|.||+|+|..+.. .+++.+|++
T Consensus 226 ~~~~~~~~~~l~~~GV----~v~~~~~V~~i~~~~--~~~~v~l~d-----G~~i~aD~Vv~a~G~~pn~-~l~~~~gl~ 293 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGV----KVMPNAIVQSVGVSS--GKLLIKLKD-----GRKVETDHIVAAVGLEPNV-ELAKTGGLE 293 (493)
T ss_dssp HHHHHHHHHHHHTTTC----EEECSCCEEEEEEET--TEEEEEETT-----SCEEEESEEEECCCEEECC-TTHHHHTCC
T ss_pred HHHHHHHHHHHHhcCC----EEEeCCEEEEEEecC--CeEEEEECC-----CCEEECCEEEECCCCCccH-HHHHHcCCc
Confidence 5677788889999999 999999999998653 556777765 5689999999999976542 356666765
Q ss_pred e
Q 011458 242 I 242 (485)
Q Consensus 242 i 242 (485)
+
T Consensus 294 ~ 294 (493)
T 1m6i_A 294 I 294 (493)
T ss_dssp B
T ss_pred c
Confidence 4
No 181
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.32 E-value=3.8e-07 Score=93.31 Aligned_cols=50 Identities=20% Similarity=0.070 Sum_probs=37.0
Q ss_pred CCcCCCCCCcccccccCCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHh
Q 011458 419 GGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLS 475 (485)
Q Consensus 419 GGv~~~ei~~~t~esk~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~ 475 (485)
|.|.++ ++|+.+.+||+|++|++..+ ...-..+.|...|.+|+.++...+
T Consensus 286 G~i~vd----~~~~~~~~~~vfa~GD~~~~---~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 286 GFIPTD----LNMVSIKYDNVYAVGDANSM---TVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SCBCBB----TTSBBSSCTTEEECGGGBTT---CCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEeC----cccccCCCCCEEEeehhccC---CCCcHHHHHHHHHHHHHHHHHHHh
Confidence 335554 37888899999999955544 122245789999999999998876
No 182
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.31 E-value=5.1e-06 Score=84.16 Aligned_cols=110 Identities=15% Similarity=0.210 Sum_probs=82.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
..+++|||||..|+.+|..+++ .|.+|+|+|+.. +.. . .+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~~~-------------~------------------~~------ 185 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSS--GGYQLDVVAPCEQVMP-------------G------------------LL------ 185 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSST-------------T------------------TS------
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCcchhh-------------c------------------cc------
Confidence 3589999999999999999998 689999999642 110 0 00
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
...+.+.+.+.+++.|| +++++++|+++..++ +.+.|.+.+
T Consensus 186 --------------------------------~~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~--~~~~v~~~~- 226 (384)
T 2v3a_A 186 --------------------------------HPAAAKAVQAGLEGLGV----RFHLGPVLASLKKAG--EGLEAHLSD- 226 (384)
T ss_dssp --------------------------------CHHHHHHHHHHHHTTTC----EEEESCCEEEEEEET--TEEEEEETT-
T ss_pred --------------------------------CHHHHHHHHHHHHHcCC----EEEeCCEEEEEEecC--CEEEEEECC-
Confidence 02233455566778899 999999999998764 567777765
Q ss_pred cCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 209 TMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+..+.+|.||+|+|..+.. .+++.+|+++
T Consensus 227 ----g~~i~~d~vv~a~G~~p~~-~l~~~~g~~~ 255 (384)
T 2v3a_A 227 ----GEVIPCDLVVSAVGLRPRT-ELAFAAGLAV 255 (384)
T ss_dssp ----SCEEEESEEEECSCEEECC-HHHHHTTCCB
T ss_pred ----CCEEECCEEEECcCCCcCH-HHHHHCCCCC
Confidence 5689999999999987653 3677888765
No 183
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.30 E-value=7.8e-07 Score=91.92 Aligned_cols=53 Identities=17% Similarity=-0.069 Sum_probs=40.5
Q ss_pred ccccccCCCCeEEEEeeeecccCcc-------hHHHHHHHHHHHHHHHHHhHHhhhhhhh
Q 011458 429 NTMESKIHPRLFFAGEVLNVDGVTG-------GFNFQNAWSGGYIAGTSIGKLSNDATLK 481 (485)
Q Consensus 429 ~t~esk~~~gLy~~GE~lDv~g~~G-------Gynl~~A~~sG~~AG~~a~~~~~~~~~~ 481 (485)
++|+++.+||+|++|++..+.+..| --.-+.|...|.+|+.++..++.++..+
T Consensus 290 ~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~ 349 (437)
T 3sx6_A 290 EHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGE 349 (437)
T ss_dssp TTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCC
T ss_pred hhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4788889999999997766544211 1246889999999999999888766544
No 184
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.28 E-value=1e-07 Score=95.92 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=56.9
Q ss_pred cCCCceeEEeeCCcCC--CCCC-c----ccccccCCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHhhhhh
Q 011458 408 KGQFKDEFVTAGGVPL--SEIS-L----NTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDAT 479 (485)
Q Consensus 408 ~~~~~~a~vt~GGv~~--~ei~-~----~t~esk~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~~~~~ 479 (485)
.-++++|.+++.|+.. +.|| | .|||+|.+||||||||+.+++|++ .|+++|.+||.+|+..+++++
T Consensus 293 IpGLE~a~~~r~G~~~ey~~i~sP~~L~~tle~k~~~~Lf~AGqi~G~~Gy~------eAaa~Gl~AG~naa~~~~g~~ 365 (443)
T 3g5s_A 293 IPGLENAEIVRYGVMHRNTYLNAPRLLGETLEFREAEGLYAAGVLAGVEGYL------ESAATGFLAGLNAARKALGLP 365 (443)
T ss_dssp STTCTTCCEEECCEEEEEEEECHHHHBCTTSEETTEEEEEECGGGGTBCSHH------HHHHHHHHHHHHHHHHHTTCC
T ss_pred CcChhhCeeeeCcEeecCceecChhHhChhceecCCCCEEECccccccHHHH------HHHHhHHHHHHHHHHHhcCCC
Confidence 3578999999999987 7788 6 799999999999999887776655 899999999999998876543
No 185
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.26 E-value=1e-06 Score=92.57 Aligned_cols=111 Identities=20% Similarity=0.228 Sum_probs=70.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
.+||+|||||++|++||++|++ . ++|+|||+. .+| |.+. +... ..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~--~-~~V~vie~~~~~G--------G~~~--~~~~---------------~~------ 153 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQ--Y-LTVALIEERGWLG--------GDMW--LKGI---------------KQ------ 153 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTT--T-CCEEEECTTSSSS--------CSGG--GTCS---------------EE------
T ss_pred cCCEEEECccHHHHHHHHHHHh--c-CCEEEEeCCCCCC--------Ceee--cccc---------------cc------
Confidence 4699999999999999999999 5 899999965 444 2221 1000 00
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
+ |++ . ...++...+.+.+ +.++ +++++++|.++..++ ..+.+...+
T Consensus 154 -~------------g~~-----------~--~~~~~~~~l~~~l-~~~v----~~~~~~~v~~i~~~~--~~~~~~~~~- 199 (493)
T 1y56_A 154 -E------------GFN-----------K--DSRKVVEELVGKL-NENT----KIYLETSALGVFDKG--EYFLVPVVR- 199 (493)
T ss_dssp -T------------TTT-----------E--EHHHHHHHHHHTC-CTTE----EEETTEEECCCEECS--SSEEEEEEE-
T ss_pred -C------------CCC-----------C--CHHHHHHHHHHHH-hcCC----EEEcCCEEEEEEcCC--cEEEEEEec-
Confidence 0 000 0 1122233333333 4578 999999999998764 445444321
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.+....+.+|+||+|||+.+
T Consensus 200 -~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 200 -GDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp -TTEEEEEEESCEEECCCEEE
T ss_pred -CCeEEEEECCEEEECCCCCc
Confidence 11124799999999999854
No 186
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.26 E-value=3.9e-07 Score=94.03 Aligned_cols=52 Identities=8% Similarity=-0.073 Sum_probs=39.5
Q ss_pred ccccccCCCCeEEEEeeeecccCcch-------HHHHHHHHHHHHHHHHHhHHhhhhhh
Q 011458 429 NTMESKIHPRLFFAGEVLNVDGVTGG-------FNFQNAWSGGYIAGTSIGKLSNDATL 480 (485)
Q Consensus 429 ~t~esk~~~gLy~~GE~lDv~g~~GG-------ynl~~A~~sG~~AG~~a~~~~~~~~~ 480 (485)
++|+++.+||+|++|++.++....+. -.=|.|...|.+++++++..++++..
T Consensus 279 ~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~ 337 (430)
T 3hyw_A 279 RCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp TTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 78999999999999988776432211 12378999999999999887766543
No 187
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.22 E-value=6.4e-07 Score=88.77 Aligned_cols=38 Identities=32% Similarity=0.489 Sum_probs=33.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (485)
++||+||||||||++||++|++...|++|+|||+. .+|
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 57999999999999999999864369999999965 666
No 188
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.20 E-value=4.1e-06 Score=95.00 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=32.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (485)
.+||+|||||++|++||+.|++ .|++|+|||+. .+|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~--~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR--SGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCCCCC
Confidence 4799999999999999999999 68999999965 555
No 189
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.16 E-value=1.2e-06 Score=90.30 Aligned_cols=57 Identities=11% Similarity=-0.030 Sum_probs=42.2
Q ss_pred cCCCCCCcccccccCCCCeEEEEeeeecccCcc-------hHHHHHHHHHHHHHHHHHhHHhhhhhhh
Q 011458 421 VPLSEISLNTMESKIHPRLFFAGEVLNVDGVTG-------GFNFQNAWSGGYIAGTSIGKLSNDATLK 481 (485)
Q Consensus 421 v~~~ei~~~t~esk~~~gLy~~GE~lDv~g~~G-------Gynl~~A~~sG~~AG~~a~~~~~~~~~~ 481 (485)
|.++ ++|+++.+||+|++|++..+.+..| --..+.|...|.+|+.++.+++.++..+
T Consensus 275 i~Vd----~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~ 338 (430)
T 3h28_A 275 VIVN----RCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp BCCC----TTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred EecC----ccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 5554 4788889999999997666543211 1246889999999999999888766543
No 190
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.13 E-value=1e-06 Score=93.60 Aligned_cols=33 Identities=33% Similarity=0.532 Sum_probs=30.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+||+||||||++|+.+|..|++ +.+|+|||++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG 57 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE---KYKVLVLERG 57 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT---TSCEEEECSS
T ss_pred CcccEEEECccHHHHHHHHHHhc---CCcEEEEecC
Confidence 46999999999999999999998 6899999975
No 191
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.12 E-value=6.4e-06 Score=87.62 Aligned_cols=35 Identities=40% Similarity=0.583 Sum_probs=31.3
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+||||+|++|+.+|..|++. ++.+|+|||+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g 46 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAG 46 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecC
Confidence 468999999999999999999983 38999999965
No 192
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.10 E-value=1.9e-05 Score=83.12 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=31.2
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|++|||+|++|+.+|..|++ .+.+|+|||+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~ 37 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE--AGVQTLMLEMG 37 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCC
Confidence 36899999999999999999999 78999999954
No 193
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.10 E-value=3.1e-06 Score=90.22 Aligned_cols=34 Identities=38% Similarity=0.537 Sum_probs=31.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+||+||||||+||+.+|..|++. ++.+|+|||++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG 35 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAG 35 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSS
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecC
Confidence 58999999999999999999984 68999999965
No 194
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.10 E-value=2.4e-05 Score=82.45 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=31.8
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...+|++|||+|++|+.+|..|++ ++.+|+|||+.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~ 43 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQ--AGIPTQIVEMG 43 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECC
Confidence 356899999999999999999999 78999999954
No 195
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.06 E-value=2.8e-05 Score=80.81 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=78.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+.+|..|++ .|.+|+|+|+. .+.. .
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~---------------~------------------------- 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRR--LGAEVTLIEYMPEILP---------------Q------------------------- 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSST---------------T-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCeEEEEEcCCcccc---------------c-------------------------
Confidence 579999999999999999998 68999999964 2210 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+ ..++.+.+.+.+++.|| +++++++|+++..++ +.+.|.+.+..
T Consensus 208 ~------------------------------~~~~~~~l~~~l~~~gV----~i~~~~~v~~i~~~~--~~~~v~~~~~~ 251 (464)
T 2eq6_A 208 G------------------------------DPETAALLRRALEKEGI----RVRTKTKAVGYEKKK--DGLHVRLEPAE 251 (464)
T ss_dssp S------------------------------CHHHHHHHHHHHHHTTC----EEECSEEEEEEEEET--TEEEEEEEETT
T ss_pred c------------------------------CHHHHHHHHHHHHhcCC----EEEcCCEEEEEEEeC--CEEEEEEeecC
Confidence 0 01223445566788899 999999999998764 55666654200
Q ss_pred CCceEEEEcCeEEEecCCCchhHH-HHHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHR-LAAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~-la~~~G~~i 242 (485)
.++..++.+|.||+|+|..+.... .++.+|+.+
T Consensus 252 ~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~ 285 (464)
T 2eq6_A 252 GGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKV 285 (464)
T ss_dssp CCSCEEEEESEEEECSCEEESCTTSSHHHHTCCB
T ss_pred CCceeEEEcCEEEECCCcccCCCCCChhhcCcee
Confidence 022347999999999997654211 145555543
No 196
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.02 E-value=4.6e-06 Score=86.72 Aligned_cols=37 Identities=19% Similarity=0.207 Sum_probs=32.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (485)
..+||+|||||++|+++|+.|++ .|++|+|+|+. .+|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~--~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRA--KGYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH--HTCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeccCCCC
Confidence 45799999999999999999999 58999999965 444
No 197
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=6.8e-05 Score=77.62 Aligned_cols=100 Identities=23% Similarity=0.317 Sum_probs=73.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+. .+. + .
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l-------------------~-------------~-------- 208 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYAN--FGTKVTILEGAGEIL-------------------S-------------G-------- 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS-------------------T-------------T--------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCccc-------------------c-------------c--------
Confidence 589999999999999999998 68999999964 221 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
++ .++.+.+.+.+++.|| +++++++|+++..++ +.+.+.+..
T Consensus 209 ~~------------------------------~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~--~~~~v~~~~-- 250 (455)
T 1ebd_A 209 FE------------------------------KQMAAIIKKRLKKKGV----EVVTNALAKGAEERE--DGVTVTYEA-- 250 (455)
T ss_dssp SC------------------------------HHHHHHHHHHHHHTTC----EEEESEEEEEEEEET--TEEEEEEEE--
T ss_pred cC------------------------------HHHHHHHHHHHHHCCC----EEEeCCEEEEEEEeC--CeEEEEEEe--
Confidence 00 1223345566778899 999999999998764 456666541
Q ss_pred CCceEEEEcCeEEEecCCCch
Q 011458 210 MNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~ 230 (485)
++.+..+.+|.||+|+|..+.
T Consensus 251 ~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 251 NGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp TTEEEEEEESEEEECSCEEES
T ss_pred CCceeEEEcCEEEECcCCCcc
Confidence 122578999999999997653
No 198
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.99 E-value=6.5e-05 Score=78.26 Aligned_cols=103 Identities=21% Similarity=0.249 Sum_probs=74.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+. .+.. . +
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~---------------~-----------------~------- 222 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSR--LGSKVTVVEFQPQIGA---------------S-----------------M------- 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSS---------------S-----------------S-------
T ss_pred ceEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCcccc---------------c-----------------c-------
Confidence 579999999999999999998 68999999964 2210 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEc-CCCCeEEEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSD-NAGRKFLLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~-~~~~~~~V~~~~~ 208 (485)
+ .++.+.+.+.+++.|| +++++++|+++..+ + ++.+.|.+.+.
T Consensus 223 -~------------------------------~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~~-~~~~~v~~~~~ 266 (478)
T 1v59_A 223 -D------------------------------GEVAKATQKFLKKQGL----DFKLSTKVISAKRNDD-KNVVEIVVEDT 266 (478)
T ss_dssp -C------------------------------HHHHHHHHHHHHHTTC----EEECSEEEEEEEEETT-TTEEEEEEEET
T ss_pred -C------------------------------HHHHHHHHHHHHHCCC----EEEeCCEEEEEEEecC-CCeEEEEEEEc
Confidence 0 1233455566788899 99999999999872 2 35566666521
Q ss_pred cCCceEEEEcCeEEEecCCCch
Q 011458 209 TMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
..+.+..+.+|.||+|+|..+.
T Consensus 267 ~~g~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 267 KTNKQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp TTTEEEEEEESEEEECSCEEEC
T ss_pred CCCCceEEECCEEEECCCCCcC
Confidence 1122578999999999997653
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.98 E-value=2.9e-05 Score=80.21 Aligned_cols=98 Identities=23% Similarity=0.344 Sum_probs=72.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
..+++|||||++|+.+|..+++ .|.+|+|+|+.. +.. + +
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~-------------~------------~------------- 188 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAK--AGKKVTVIDILDRPLG-------------V------------Y------------- 188 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTT-------------T------------T-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCeEEEEecCccccc-------------c------------c-------------
Confidence 4689999999999999999998 689999999642 210 0 0
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
++ .++.+.+.+.+++.|| +++++++|+++..++ ..+.+.++
T Consensus 189 -~~------------------------------~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~--~v~~v~~~-- 229 (447)
T 1nhp_A 189 -LD------------------------------KEFTDVLTEEMEANNI----TIATGETVERYEGDG--RVQKVVTD-- 229 (447)
T ss_dssp -CC------------------------------HHHHHHHHHHHHTTTE----EEEESCCEEEEECSS--BCCEEEES--
T ss_pred -CC------------------------------HHHHHHHHHHHHhCCC----EEEcCCEEEEEEccC--cEEEEEEC--
Confidence 00 1234456667788899 999999999997542 33355554
Q ss_pred cCCceEEEEcCeEEEecCCCch
Q 011458 209 TMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
+.++.+|.||+|+|..+.
T Consensus 230 ----~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 230 ----KNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp ----SCEEECSEEEECSCEEES
T ss_pred ----CCEEECCEEEECcCCCCC
Confidence 457999999999997653
No 200
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.95 E-value=3.7e-05 Score=79.63 Aligned_cols=97 Identities=26% Similarity=0.326 Sum_probs=72.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||++|+.+|..|++ .|.+|+|+|+.. +.. . . .
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~--~g~~V~lv~~~~~~l~---------------~-~------------~---------- 207 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHR--LGAEVIVLEYMDRILP---------------T-M------------D---------- 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT---------------T-S------------C----------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCEEEEEecCCcccc---------------c-c------------C----------
Confidence 579999999999999999998 688999999642 110 0 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
.++.+.+.+.+++.|| +++++++|+++..++ +.+.+.+.+
T Consensus 208 --------------------------------~~~~~~l~~~l~~~Gv----~i~~~~~V~~i~~~~--~~v~v~~~~-- 247 (455)
T 2yqu_A 208 --------------------------------LEVSRAAERVFKKQGL----TIRTGVRVTAVVPEA--KGARVELEG-- 247 (455)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC----EEECSCCEEEEEEET--TEEEEEETT--
T ss_pred --------------------------------HHHHHHHHHHHHHCCC----EEEECCEEEEEEEeC--CEEEEEECC--
Confidence 1222334556677899 999999999998764 556676654
Q ss_pred CCceEEEEcCeEEEecCCCch
Q 011458 210 MNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~ 230 (485)
+..+.+|.||+|+|..+.
T Consensus 248 ---g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 248 ---GEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp ---SCEEEESEEEECSCEEEC
T ss_pred ---CeEEEcCEEEECcCCCcC
Confidence 567999999999997653
No 201
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.95 E-value=4.8e-05 Score=82.90 Aligned_cols=39 Identities=28% Similarity=0.307 Sum_probs=33.7
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCc
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLS 88 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~ 88 (485)
...+||+|||||++|++||..|++ .|++|+|+|+. .+|.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAA--RGHQVTLFDAHSEIGG 410 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCC
Confidence 346899999999999999999999 68999999964 5653
No 202
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.95 E-value=2.1e-05 Score=82.44 Aligned_cols=112 Identities=16% Similarity=0.154 Sum_probs=78.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCC-CCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~-g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
.+++|||||..|+-.|..+++..+ |.+|+|+|+.. +..
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------------------------------------- 227 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR---------------------------------------- 227 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc----------------------------------------
Confidence 579999999999999999988311 78999999642 110
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
.++ .++.+.+.+.+++.|| +|+++++|+++..++ ++.+.|.+.+
T Consensus 228 ~~d------------------------------~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~-~~~~~v~~~~- 271 (490)
T 1fec_A 228 GFD------------------------------SELRKQLTEQLRANGI----NVRTHENPAKVTKNA-DGTRHVVFES- 271 (490)
T ss_dssp TSC------------------------------HHHHHHHHHHHHHTTE----EEEETCCEEEEEECT-TSCEEEEETT-
T ss_pred ccC------------------------------HHHHHHHHHHHHhCCC----EEEeCCEEEEEEEcC-CCEEEEEECC-
Confidence 000 1233455667788999 999999999998764 3456777764
Q ss_pred cCCceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 209 TMNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
+..+.+|.||+|+|..+..-.+ ++.+|+.+
T Consensus 272 ----G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~ 302 (490)
T 1fec_A 272 ----GAEADYDVVMLAIGRVPRSQTLQLEKAGVEV 302 (490)
T ss_dssp ----SCEEEESEEEECSCEEESCTTSCGGGGTCCB
T ss_pred ----CcEEEcCEEEEccCCCcCccccCchhcCccC
Confidence 4589999999999976542112 44555543
No 203
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.95 E-value=9.2e-06 Score=85.46 Aligned_cols=51 Identities=14% Similarity=0.109 Sum_probs=38.0
Q ss_pred eCCcCCCCCCcccccccCCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHh
Q 011458 418 AGGVPLSEISLNTMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLS 475 (485)
Q Consensus 418 ~GGv~~~ei~~~t~esk~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~ 475 (485)
.|+|.++ ++|+.+..||+|++|++..+.-+ -.-|.|...|..+++++.+.+
T Consensus 350 ~g~I~Vd----~~lq~~~~~~IfAiGD~a~~~~p---~~a~~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 350 KRGLAVN----DFLQVKGSNNIFAIGDNAFAGLP---PTAQVAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp CSSEEBC----TTSBBTTCSSEEECGGGEESSSC---CCHHHHHHHHHHHHHHHHHHT
T ss_pred CCceeEC----CccccCCCCCEEEEEcccCCCCC---CchHHHHHHHHHHHHHHHHHh
Confidence 3667665 47999999999999976654211 134789999999999987644
No 204
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.90 E-value=7.9e-05 Score=77.56 Aligned_cols=116 Identities=21% Similarity=0.200 Sum_probs=78.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-+|..+++ .|.+|+|+|+. .+.. + .
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~--------~-------------------------------~ 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQR--LGADVTAVEFLGHVGG--------V-------------------------------G 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSC--------S-------------------------------S
T ss_pred ceEEEECCCHHHHHHHHHHHH--cCCEEEEEeccCccCC--------c-------------------------------c
Confidence 479999999999999999998 68999999964 2210 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+ ..++.+.+.+.+++.|| +++++++|+++..++ ++.+.+.+.+..
T Consensus 218 ~------------------------------~~~~~~~l~~~l~~~Gv----~i~~~~~v~~i~~~~-~~~~~v~~~~~~ 262 (474)
T 1zmd_A 218 I------------------------------DMEISKNFQRILQKQGF----KFKLNTKVTGATKKS-DGKIDVSIEAAS 262 (474)
T ss_dssp C------------------------------CHHHHHHHHHHHHHTTC----EEECSEEEEEEEECT-TSCEEEEEEETT
T ss_pred c------------------------------CHHHHHHHHHHHHHCCC----EEEeCceEEEEEEcC-CceEEEEEEecC
Confidence 0 01223345566788899 999999999998764 332566542101
Q ss_pred CCceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
.+.+.++.+|.||+|+|..+....+ ++.+|+++
T Consensus 263 ~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~ 296 (474)
T 1zmd_A 263 GGKAEVITCDVLLVCIGRRPFTKNLGLEELGIEL 296 (474)
T ss_dssp SCCCEEEEESEEEECSCEEECCTTSSHHHHTCCC
T ss_pred CCCceEEEcCEEEECcCCCcCCCcCCchhcCCcc
Confidence 1225789999999999976542111 45556543
No 205
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.90 E-value=4.3e-05 Score=79.80 Aligned_cols=108 Identities=18% Similarity=0.221 Sum_probs=76.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
..+|+|||||+.|+-+|..|++ .|.+|+|+|+.. +..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~---------------------------------------- 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVE--LGKKVRMIERNDHIGT---------------------------------------- 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHH--TTCEEEEECCGGGTTS----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh--cCCeEEEEEeCCchhh----------------------------------------
Confidence 4689999999999999999998 688999999632 110
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
.++ .++.+.+.+.+++.|| +++++++|+++..++ +.+.+.++
T Consensus 224 ~~~------------------------------~~~~~~l~~~l~~~Gv----~i~~~~~v~~i~~~~--~v~~v~~~-- 265 (480)
T 3cgb_A 224 IYD------------------------------GDMAEYIYKEADKHHI----EILTNENVKAFKGNE--RVEAVETD-- 265 (480)
T ss_dssp SSC------------------------------HHHHHHHHHHHHHTTC----EEECSCCEEEEEESS--BEEEEEET--
T ss_pred cCC------------------------------HHHHHHHHHHHHHcCc----EEEcCCEEEEEEcCC--cEEEEEEC--
Confidence 000 1233455667788999 999999999998642 44455554
Q ss_pred cCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 209 TMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+.++.+|.||+|+|..+.. .+++.+|+++
T Consensus 266 ----~~~i~~D~vi~a~G~~p~~-~~l~~~g~~~ 294 (480)
T 3cgb_A 266 ----KGTYKADLVLVSVGVKPNT-DFLEGTNIRT 294 (480)
T ss_dssp ----TEEEECSEEEECSCEEESC-GGGTTSCCCB
T ss_pred ----CCEEEcCEEEECcCCCcCh-HHHHhCCccc
Confidence 3579999999999976531 2445555543
No 206
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.89 E-value=0.00022 Score=73.79 Aligned_cols=145 Identities=10% Similarity=0.159 Sum_probs=80.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
..+|+|||||.+|+-+|..|++..++.+|+++++...-. ..... .+...+. .+.+. ..+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~-------------p~~~~---~~~~~~~--~p~~~-~~~~~ 287 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALK-------------PADDS---PFVNEVF--APKFT-DLIYS 287 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCC-------------BCCCC---HHHHGGG--SHHHH-HHHHH
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCc-------------CccCC---ccchhcc--ChhHH-HHHhc
Confidence 458999999999999999999854478999999642110 00000 1111111 11111 11223
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHH----HHHH-HHHH-CCCCCccEEEeCceEEEEEEcCCCCeEEE
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVID----CLLT-EAKH-RGVAPSVVLQTGKVVTTASSDNAGRKFLL 203 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~----~L~~-~l~~-~GV~~~~~i~~~~~V~~i~~~~~~~~~~V 203 (485)
.....-..+++.... ..|+ .....++. .+.. .+.. .|| +++.+++|+++..++ +.+.|
T Consensus 288 l~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~l~~~~~~~~~~v----~i~~~~~v~~v~~~~--~~~~v 351 (463)
T 3s5w_A 288 REHAERERLLREYHN--------TNYS--VVDTDLIERIYGVFYRQKVSGIPRH----AFRCMTTVERATATA--QGIEL 351 (463)
T ss_dssp SCHHHHHHHHHHTGG--------GTSS--CBCHHHHHHHHHHHHHHHHHCCCCS----EEETTEEEEEEEEET--TEEEE
T ss_pred CCHHHHHHHHHHhhc--------cCCC--cCCHHHHHHHHHHHHHHHhcCCCCe----EEEeCCEEEEEEecC--CEEEE
Confidence 333222233322210 0010 01122222 2222 2221 589 999999999998764 67878
Q ss_pred EEeeecCCceEEEEcCeEEEecCCCc
Q 011458 204 KVEKRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 204 ~~~~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
.+.+..++...++.+|.||+|||..+
T Consensus 352 ~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 352 ALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp EEEETTTCCEEEEEESEEEECCCEEC
T ss_pred EEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 77642234445799999999999654
No 207
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.89 E-value=0.00011 Score=78.64 Aligned_cols=35 Identities=34% Similarity=0.601 Sum_probs=31.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+||||+|++|+++|..|++. ++.+|+|||++
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g 57 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKG 57 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecC
Confidence 468999999999999999999984 58999999954
No 208
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.87 E-value=7.8e-05 Score=77.46 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=77.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+++|||||..|+-.|..+++ .|.+|+|+|+. .+.. .
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~---------------~------------------------- 212 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWAR--LGAEVTVVEFAPRCAP---------------T------------------------- 212 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSST---------------T-------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH--hCCEEEEEecCCcccc---------------c-------------------------
Confidence 579999999999999999998 68899999964 2110 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHH-HHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEA-KHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l-~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
++ .++.+.+.+.+ ++.|| +++++++|+++..++ +.+.+.+.+
T Consensus 213 ~d------------------------------~~~~~~l~~~l~~~~gv----~i~~~~~v~~i~~~~--~~~~v~~~~- 255 (468)
T 2qae_A 213 LD------------------------------EDVTNALVGALAKNEKM----KFMTSTKVVGGTNNG--DSVSLEVEG- 255 (468)
T ss_dssp SC------------------------------HHHHHHHHHHHHHHTCC----EEECSCEEEEEEECS--SSEEEEEEC-
T ss_pred CC------------------------------HHHHHHHHHHHhhcCCc----EEEeCCEEEEEEEcC--CeEEEEEEc-
Confidence 00 12234556667 78899 999999999998764 346666541
Q ss_pred cCCceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 209 TMNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
.+++...+.+|.||+|+|..+....+ ++.+|+++
T Consensus 256 ~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~ 290 (468)
T 2qae_A 256 KNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAK 290 (468)
T ss_dssp C---EEEEEESEEEECSCEEECCTTSCHHHHTCCB
T ss_pred CCCceEEEECCEEEECCCcccCCCCCCchhcCCcc
Confidence 01123679999999999976542111 45556554
No 209
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=6.3e-05 Score=78.52 Aligned_cols=109 Identities=14% Similarity=0.202 Sum_probs=76.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+++|||||..|+-.|..+++ .|.+|+++|+.. +.. .
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------~--------------------------- 223 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHG--LGSETHLVIRGETVLR-------------K--------------------------- 223 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHH--TTCEEEEECSSSSSCT-------------T---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCceEEEEeCCcccc-------------c---------------------------
Confidence 479999999999999999998 688999999642 110 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCC-eEEEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGR-KFLLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~-~~~V~~~~~ 208 (485)
++ .++.+.+.+.+++.|| +++++++|+++..++ ++ ...|.+.+
T Consensus 224 ~d------------------------------~~~~~~l~~~l~~~Gv----~i~~~~~v~~i~~~~-~~~~~~v~~~~- 267 (479)
T 2hqm_A 224 FD------------------------------ECIQNTITDHYVKEGI----NVHKLSKIVKVEKNV-ETDKLKIHMND- 267 (479)
T ss_dssp SC------------------------------HHHHHHHHHHHHHHTC----EEECSCCEEEEEECC--CCCEEEEETT-
T ss_pred cC------------------------------HHHHHHHHHHHHhCCe----EEEeCCEEEEEEEcC-CCcEEEEEECC-
Confidence 00 0112244556677899 999999999998753 23 36677764
Q ss_pred cCCce-EEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 209 TMNLV-ECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 209 ~~~~~-~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
+ ..+.+|.||+|+|..+.. .+ ++..|+++
T Consensus 268 ----G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~ 298 (479)
T 2hqm_A 268 ----SKSIDDVDELIWTIGRKSHL-GMGSENVGIKL 298 (479)
T ss_dssp ----SCEEEEESEEEECSCEEECC-CSSGGGGTCCB
T ss_pred ----CcEEEEcCEEEECCCCCCcc-ccChhhcCceE
Confidence 5 689999999999976643 33 34455543
No 210
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.81 E-value=7.1e-05 Score=78.52 Aligned_cols=112 Identities=16% Similarity=0.198 Sum_probs=78.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCC-CCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~-g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
.+++|||||..|+-.|..+++..+ |.+|+|+|+.. +..
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------------------------------------- 231 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR---------------------------------------- 231 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc----------------------------------------
Confidence 479999999999999999988311 78999999642 110
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
.++ .++.+.+.+.+++.|| +++++++|+++..++ ++.+.|.+.+
T Consensus 232 ~~d------------------------------~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~-~~~~~v~~~~- 275 (495)
T 2wpf_A 232 GFD------------------------------ETIREEVTKQLTANGI----EIMTNENPAKVSLNT-DGSKHVTFES- 275 (495)
T ss_dssp TSC------------------------------HHHHHHHHHHHHHTTC----EEEESCCEEEEEECT-TSCEEEEETT-
T ss_pred ccC------------------------------HHHHHHHHHHHHhCCC----EEEeCCEEEEEEEcC-CceEEEEECC-
Confidence 000 1122345566778899 999999999998764 3456777764
Q ss_pred cCCceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 209 TMNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
+..+.+|.||+|+|..+..-.+ ++.+|+.+
T Consensus 276 ----G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~ 306 (495)
T 2wpf_A 276 ----GKTLDVDVVMMAIGRIPRTNDLQLGNVGVKL 306 (495)
T ss_dssp ----SCEEEESEEEECSCEEECCGGGTGGGTTCCB
T ss_pred ----CcEEEcCEEEECCCCcccccccchhhcCccC
Confidence 5689999999999976542222 45556554
No 211
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.78 E-value=0.00026 Score=69.06 Aligned_cols=101 Identities=18% Similarity=0.314 Sum_probs=71.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||+|..|+-.|..|++ .+.+|+++++.... . . .
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~----------------~--~-----------~----------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSN--IASEVHLIHRRDGF----------------R--A-----------E----------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSSSC----------------C--C-----------C-----------
T ss_pred CeEEEECCCHHHHHHHHHHHh--cCCeEEEEEeCCcc----------------c--c-----------C-----------
Confidence 579999999999999999998 68899999864210 0 0 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecC
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 210 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 210 (485)
..+.+.+.+.+++.|| +++++++|+++..++ ++...|.+.+...
T Consensus 184 -------------------------------~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~-~~v~~v~~~~~~~ 227 (320)
T 1trb_A 184 -------------------------------KILIKRLMDKVENGNI----ILHTNRTLEEVTGDQ-MGVTGVRLRDTQN 227 (320)
T ss_dssp -------------------------------HHHHHHHHHHHHTSSE----EEECSCEEEEEEECS-SSEEEEEEECCTT
T ss_pred -------------------------------HHHHHHHHHhcccCCe----EEEcCceeEEEEcCC-CceEEEEEEeccC
Confidence 0112234455677899 999999999998764 3444566653111
Q ss_pred -CceEEEEcCeEEEecCCCc
Q 011458 211 -NLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 211 -~~~~~i~ad~VIlAtG~~~ 229 (485)
+....+.+|.||+|+|..+
T Consensus 228 ~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 228 SDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp CCCCEEEECSEEEECSCEEE
T ss_pred CCceEEEEcCEEEEEeCCCC
Confidence 2346899999999999654
No 212
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.77 E-value=2.2e-05 Score=79.35 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=32.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC--CCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG--KPL 87 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~--~~g 87 (485)
..+||+|||||++|++||+.|++ .|++|+|+|+. .+|
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~--~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR--AGHDVTILEANANRVG 81 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH--TSCEEEEECSCSSCCB
T ss_pred CCceEEEECCCHHHHHHHHHHHH--CCCcEEEEeccccccC
Confidence 45799999999999999999999 68999999954 666
No 213
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.75 E-value=2e-05 Score=80.23 Aligned_cols=39 Identities=26% Similarity=0.243 Sum_probs=34.2
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCc
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (485)
...+||+|||||++|+++|+.|++ .|.+|+|+|+ +.+|+
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~--~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLAS--SGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSG
T ss_pred CCCCCEEEECccHHHHHHHHHHHH--CCCceEEEeccCCCCC
Confidence 456899999999999999999999 6899999995 46764
No 214
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.74 E-value=3.8e-06 Score=87.34 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=31.9
Q ss_pred CCcEEEECcchHHHHHHHHHhc-cCC----CCcEEEEeCC-CCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKT-VAP----KLNVVIIEKG-KPL 87 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~-~~~----g~~V~llE~~-~~g 87 (485)
.+||+|||||++|++||..|++ ..+ +.+|+|||+. .++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g 46 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW 46 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC
Confidence 4699999999999999999988 533 7899999965 444
No 215
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.71 E-value=2.3e-05 Score=79.93 Aligned_cols=40 Identities=28% Similarity=0.232 Sum_probs=33.9
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSK 89 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k 89 (485)
.++||+|||||++|++||+.|++. +|.+|+|+|+ +.+|+.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~-~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQ-LDKRVLVLERRPHIGGN 46 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHH-SCCCEEEECSSSSSSGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHh-CCCCEEEEeCCCCCCCe
Confidence 368999999999999999999993 2899999995 477743
No 216
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.70 E-value=2.2e-05 Score=80.82 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=30.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
+.+||+|||||++|+++|+.|++ .|.+|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~--~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQ--HDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHH--TTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHH--CCCeEEEEcCCC
Confidence 45799999999999999999999 789999999654
No 217
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.67 E-value=0.00031 Score=72.88 Aligned_cols=95 Identities=16% Similarity=0.243 Sum_probs=72.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-+|..+++ .|.+|+++|+.. +. .
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------------~--------------------------- 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFAR--LGSKVTVLARNTLFF--------------R--------------------------- 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTT--------------T---------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCEEEEEEECCccC--------------C---------------------------
Confidence 479999999999999999998 688999999631 11 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
++ ..+.+.+.+.+++.|| +++++++|+++..++ +.+.|.++
T Consensus 214 ~~------------------------------~~~~~~l~~~l~~~Gv----~i~~~~~v~~i~~~~--~~~~v~~~--- 254 (467)
T 1zk7_A 214 ED------------------------------PAIGEAVTAAFRAEGI----EVLEHTQASQVAHMD--GEFVLTTT--- 254 (467)
T ss_dssp SC------------------------------HHHHHHHHHHHHHTTC----EEETTCCEEEEEEET--TEEEEEET---
T ss_pred CC------------------------------HHHHHHHHHHHHhCCC----EEEcCCEEEEEEEeC--CEEEEEEC---
Confidence 00 1223455666788899 999999999998763 56667665
Q ss_pred CCceEEEEcCeEEEecCCCch
Q 011458 210 MNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~ 230 (485)
+.++.+|.||+|+|..+.
T Consensus 255 ---~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 255 ---HGELRADKLLVATGRTPN 272 (467)
T ss_dssp ---TEEEEESEEEECSCEEES
T ss_pred ---CcEEEcCEEEECCCCCcC
Confidence 357999999999997653
No 218
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.66 E-value=0.0002 Score=74.36 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=72.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+. .+.. . +
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtli~~~~~~l~---------------~-----------------~------- 216 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGR--IGSEVTVVEFASEIVP---------------T-----------------M------- 216 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHH--HTCEEEEECSSSSSST---------------T-----------------S-------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCcccc---------------c-----------------c-------
Confidence 579999999999999999998 57899999964 2210 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+ .++.+.+.+.+++.|| +++++++|+++..++ +.+.+.+.+..
T Consensus 217 -~------------------------------~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~--~~~~v~~~~~~ 259 (470)
T 1dxl_A 217 -D------------------------------AEIRKQFQRSLEKQGM----KFKLKTKVVGVDTSG--DGVKLTVEPSA 259 (470)
T ss_dssp -C------------------------------HHHHHHHHHHHHHSSC----CEECSEEEEEEECSS--SSEEEEEEESS
T ss_pred -c------------------------------HHHHHHHHHHHHHcCC----EEEeCCEEEEEEEcC--CeEEEEEEecC
Confidence 0 1223345566788899 999999999998654 34666654211
Q ss_pred CCceEEEEcCeEEEecCCCch
Q 011458 210 MNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~ 230 (485)
++++..+.+|.||+|+|..+.
T Consensus 260 ~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 260 GGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp SCCCEEEEESEEECCCCEEEC
T ss_pred CCcceEEECCEEEECCCCCcC
Confidence 222468999999999997653
No 219
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.66 E-value=0.00041 Score=72.47 Aligned_cols=115 Identities=16% Similarity=0.133 Sum_probs=76.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+++|||||..|+-.|..+++ .|.+|+++++..+.. . +
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~l~-------------~---------------------------~ 223 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTG--IGLDTTVMMRSIPLR-------------G---------------------------F 223 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCSST-------------T---------------------------S
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCceEEEEcCcccc-------------c---------------------------C
Confidence 479999999999999999998 688999998642110 0 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecC
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 210 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 210 (485)
+ .++.+.+.+.+++.|| ++++++.|+++...+ ++.+.|.+.+...
T Consensus 224 d------------------------------~~~~~~l~~~l~~~gv----~~~~~~~v~~i~~~~-~~~~~v~~~~~~~ 268 (488)
T 3dgz_A 224 D------------------------------QQMSSLVTEHMESHGT----QFLKGCVPSHIKKLP-TNQLQVTWEDHAS 268 (488)
T ss_dssp C------------------------------HHHHHHHHHHHHHTTC----EEEETEEEEEEEECT-TSCEEEEEEETTT
T ss_pred C------------------------------HHHHHHHHHHHHHCCC----EEEeCCEEEEEEEcC-CCcEEEEEEeCCC
Confidence 0 1123345566778899 999999999998754 3556666653111
Q ss_pred CceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 211 NLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 211 ~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
+....+.+|.||+|+|-.+..-.+ ++..|+.+
T Consensus 269 g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~ 301 (488)
T 3dgz_A 269 GKEDTGTFDTVLWAIGRVPETRTLNLEKAGIST 301 (488)
T ss_dssp TEEEEEEESEEEECSCEEESCGGGTGGGGTCCB
T ss_pred CeeEEEECCEEEEcccCCcccCcCCccccCcEe
Confidence 223468999999999975532111 33445543
No 220
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.64 E-value=0.00044 Score=67.67 Aligned_cols=98 Identities=17% Similarity=0.180 Sum_probs=69.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
..+|+|||+|..|+-+|..|++ .+.+|+++++..... .
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~--~g~~v~~v~~~~~~~------------------~---------------------- 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTK--YGSKVFMLVRKDHLR------------------A---------------------- 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSSSCC------------------S----------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCccC------------------C----------------------
Confidence 3579999999999999999998 678999998532110 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHC-CCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHR-GVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~-GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
...+.+.+.+. || ++++++.|+++..++ ++...|.+.+.
T Consensus 211 -----------------------------------~~~~~~~l~~~~gv----~i~~~~~v~~i~~~~-~~~~~v~~~~~ 250 (338)
T 3itj_A 211 -----------------------------------STIMQKRAEKNEKI----EILYNTVALEAKGDG-KLLNALRIKNT 250 (338)
T ss_dssp -----------------------------------CHHHHHHHHHCTTE----EEECSEEEEEEEESS-SSEEEEEEEET
T ss_pred -----------------------------------CHHHHHHHHhcCCe----EEeecceeEEEEccc-CcEEEEEEEEC
Confidence 00122334444 89 999999999998765 34555666542
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
..+.+.++.+|.||+|+|..+
T Consensus 251 ~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 251 KKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp TTTEEEEEECSEEEECSCEEE
T ss_pred CCCceEEEEeCEEEEEeCCCC
Confidence 234457899999999999643
No 221
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.64 E-value=0.00029 Score=73.86 Aligned_cols=97 Identities=19% Similarity=0.202 Sum_probs=72.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+++|||||..|+-.|..+++ .|.+|+++|+.. +.. . +
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------~-------------------~------- 221 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTE--LGVPVTVVASQDHVLP-------------Y-------------------E------- 221 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHH--TTCCEEEECSSSSSSC-------------C-------------------S-------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCcccc-------------c-------------------c-------
Confidence 579999999999999999998 688999999642 110 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+ .++.+.+.+.+++.|| +|+++++|+++..++ +.+.|.+.+
T Consensus 222 -d------------------------------~~~~~~l~~~l~~~GV----~i~~~~~V~~i~~~~--~~v~v~~~~-- 262 (499)
T 1xdi_A 222 -D------------------------------ADAALVLEESFAERGV----RLFKNARAASVTRTG--AGVLVTMTD-- 262 (499)
T ss_dssp -S------------------------------HHHHHHHHHHHHHTTC----EEETTCCEEEEEECS--SSEEEEETT--
T ss_pred -C------------------------------HHHHHHHHHHHHHCCC----EEEeCCEEEEEEEeC--CEEEEEECC--
Confidence 0 1123345566788899 999999999998764 446666554
Q ss_pred CCceEEEEcCeEEEecCCCch
Q 011458 210 MNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~ 230 (485)
+.++.+|.||+|+|..+.
T Consensus 263 ---g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 263 ---GRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp ---SCEEEESEEEECCCEEEC
T ss_pred ---CcEEEcCEEEECCCCCcC
Confidence 568999999999997653
No 222
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.63 E-value=3.6e-05 Score=80.56 Aligned_cols=39 Identities=36% Similarity=0.536 Sum_probs=33.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSK 89 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k 89 (485)
+.+||+|||||++|++||+.|++ .|.+|+|+|+ +.+|+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKI--HGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHT--TSCEEEEECSSSSSCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEeCCCCCCc
Confidence 35799999999999999999999 6899999994 577753
No 223
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.63 E-value=0.00027 Score=73.28 Aligned_cols=112 Identities=20% Similarity=0.256 Sum_probs=76.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-.|..+++ .|.+|+|+|+. .+. + .
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l-------------------~-------------~-------- 209 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKN--YGVDVTIVEFLPRAL-------------------P-------------N-------- 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS-------------------T-------------T--------
T ss_pred CeEEEECCcHHHHHHHHHHHH--cCCeEEEEEcCCccc-------------------c-------------c--------
Confidence 579999999999999999998 68899999964 211 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
++ .++.+.+.+.+++.|| +++++++|+++..++ +.+.+.+.+
T Consensus 210 ~~------------------------------~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~~~--~~~~v~~~~-- 251 (464)
T 2a8x_A 210 ED------------------------------ADVSKEIEKQFKKLGV----TILTATKVESIADGG--SQVTVTVTK-- 251 (464)
T ss_dssp SC------------------------------HHHHHHHHHHHHHHTC----EEECSCEEEEEEECS--SCEEEEEES--
T ss_pred cC------------------------------HHHHHHHHHHHHHcCC----EEEeCcEEEEEEEcC--CeEEEEEEc--
Confidence 00 1112234456677899 999999999998764 345565541
Q ss_pred CCceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
+++..++.+|.||+|+|..+....+ ++.+|+.+
T Consensus 252 ~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~ 285 (464)
T 2a8x_A 252 DGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVAL 285 (464)
T ss_dssp SSCEEEEEESEEEECSCEEECCSSSCHHHHTCCB
T ss_pred CCceEEEEcCEEEECCCCCccCCCCCchhcCCcc
Confidence 1223689999999999976542111 45555543
No 224
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.62 E-value=0.00014 Score=76.00 Aligned_cols=113 Identities=15% Similarity=0.190 Sum_probs=77.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+. .+.. .
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~--~G~~Vtlv~~~~~~l~-------------~--------------------------- 223 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYST--LGSRLDVVEMMDGLMQ-------------G--------------------------- 223 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSSSSST-------------T---------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECCcccc-------------c---------------------------
Confidence 579999999999999999998 57899999964 2110 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
++ .++.+.+.+.+++.|| +++++++|+++..++ +...|.+.+ .
T Consensus 224 ~~------------------------------~~~~~~l~~~l~~~gV----~i~~~~~v~~i~~~~--~~~~v~~~~-~ 266 (482)
T 1ojt_A 224 AD------------------------------RDLVKVWQKQNEYRFD----NIMVNTKTVAVEPKE--DGVYVTFEG-A 266 (482)
T ss_dssp SC------------------------------HHHHHHHHHHHGGGEE----EEECSCEEEEEEEET--TEEEEEEES-S
T ss_pred cC------------------------------HHHHHHHHHHHHhcCC----EEEECCEEEEEEEcC--CeEEEEEec-c
Confidence 00 1122344556677899 999999999998764 456666652 0
Q ss_pred CCceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
.+++..+.+|.||+|+|..+..-.+ ++.+|+++
T Consensus 267 ~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~ 300 (482)
T 1ojt_A 267 NAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAV 300 (482)
T ss_dssp SCCSSCEEESCEEECCCEEECGGGTTGGGTTCCC
T ss_pred CCCceEEEcCEEEECcCCCcCCCCCChhhcCcee
Confidence 1113468899999999976643222 45566544
No 225
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.62 E-value=0.00022 Score=71.78 Aligned_cols=102 Identities=20% Similarity=0.187 Sum_probs=75.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+++|||||+.|+-+|..|++ .|.+|+++|+.. +. . .+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l-------------~----~~---------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE--AGYHVKLIHRGAMFL-------------G----LD---------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH--TTCEEEEECSSSCCT-------------T----CC----------------------
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCCeec-------------c----CC----------------------
Confidence 579999999999999999998 688999999642 11 0 00
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
.++.+.+.+.+++.|| +++++++|+++. . . .|.+++
T Consensus 183 --------------------------------~~~~~~l~~~l~~~gV----~i~~~~~v~~i~--~--~--~v~~~~-- 218 (367)
T 1xhc_A 183 --------------------------------EELSNMIKDMLEETGV----KFFLNSELLEAN--E--E--GVLTNS-- 218 (367)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTE----EEECSCCEEEEC--S--S--EEEETT--
T ss_pred --------------------------------HHHHHHHHHHHHHCCC----EEEcCCEEEEEE--e--e--EEEECC--
Confidence 0123345566778899 999999999986 2 2 255554
Q ss_pred CCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+. +.+|.||+|+|..+.. .+++.+|++.
T Consensus 219 ---g~-i~~D~vi~a~G~~p~~-~ll~~~gl~~ 246 (367)
T 1xhc_A 219 ---GF-IEGKVKICAIGIVPNV-DLARRSGIHT 246 (367)
T ss_dssp ---EE-EECSCEEEECCEEECC-HHHHHTTCCB
T ss_pred ---CE-EEcCEEEECcCCCcCH-HHHHhCCCCC
Confidence 45 9999999999977653 3677778764
No 226
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.59 E-value=0.00035 Score=73.05 Aligned_cols=98 Identities=20% Similarity=0.274 Sum_probs=71.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
..+|+|||||..|+-+|..|++ .|.+|+|+|+.. +.. .
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------~-------------------------- 232 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQR--KGKEVVLIDVVDTCLA-------------G-------------------------- 232 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTT-------------T--------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHH--CCCeEEEEEcccchhh-------------h--------------------------
Confidence 3579999999999999999998 689999999642 110 0
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
.++ .++.+.+.+.+++.|| +++++++|+++..+ +....|.++
T Consensus 233 ~~~------------------------------~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~--~~v~~v~~~-- 274 (490)
T 2bc0_A 233 YYD------------------------------RDLTDLMAKNMEEHGI----QLAFGETVKEVAGN--GKVEKIITD-- 274 (490)
T ss_dssp TSC------------------------------HHHHHHHHHHHHTTTC----EEEETCCEEEEECS--SSCCEEEES--
T ss_pred HHH------------------------------HHHHHHHHHHHHhCCe----EEEeCCEEEEEEcC--CcEEEEEEC--
Confidence 000 1123345566788899 99999999999753 233345553
Q ss_pred cCCceEEEEcCeEEEecCCCch
Q 011458 209 TMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
+.++.+|.||+|+|..+.
T Consensus 275 ----g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 275 ----KNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp ----SCEEECSEEEECCCEEEC
T ss_pred ----CcEEECCEEEECCCCCcC
Confidence 468999999999997653
No 227
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.58 E-value=0.00037 Score=74.53 Aligned_cols=106 Identities=19% Similarity=0.294 Sum_probs=77.5
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-+|..+++ .|.+|+++|+.. +.. . +
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~-------------~-------------------~------- 226 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRE--RGIEVTLVEMANQVMP-------------P-------------------I------- 226 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT-------------T-------------------S-------
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCcccc-------------c-------------------C-------
Confidence 479999999999999999998 688999999532 110 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+ .++.+.+.+.+++.|| +++++++|+++..++ + .|.+.+
T Consensus 227 -~------------------------------~~~~~~l~~~l~~~GV----~i~~~~~v~~i~~~~--~--~v~~~~-- 265 (588)
T 3ics_A 227 -D------------------------------YEMAAYVHEHMKNHDV----ELVFEDGVDALEENG--A--VVRLKS-- 265 (588)
T ss_dssp -C------------------------------HHHHHHHHHHHHHTTC----EEECSCCEEEEEGGG--T--EEEETT--
T ss_pred -C------------------------------HHHHHHHHHHHHHcCC----EEEECCeEEEEecCC--C--EEEECC--
Confidence 0 1123445566778899 999999999997653 3 355554
Q ss_pred CCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+.++.+|.||+|+|..+.. .+++.+|+++
T Consensus 266 ---g~~i~~D~Vi~a~G~~p~~-~~l~~~g~~~ 294 (588)
T 3ics_A 266 ---GSVIQTDMLILAIGVQPES-SLAKGAGLAL 294 (588)
T ss_dssp ---SCEEECSEEEECSCEEECC-HHHHHTTCCB
T ss_pred ---CCEEEcCEEEEccCCCCCh-HHHHhcCceE
Confidence 5689999999999976642 4577777764
No 228
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.57 E-value=4.2e-05 Score=77.03 Aligned_cols=37 Identities=27% Similarity=0.274 Sum_probs=32.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCcc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLSK 89 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~k 89 (485)
+||+|||||++|+++|+.|++ .|.+|+|+|+ +.+|+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK--LNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG--GTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHh--CCCcEEEEecCCCCCcc
Confidence 699999999999999999999 5899999995 567753
No 229
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.55 E-value=0.0005 Score=71.43 Aligned_cols=99 Identities=19% Similarity=0.159 Sum_probs=72.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-.|..+++ .|.+|+++|+.. +. + .
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l-------------------~---------------------~ 218 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWAR--LGAEVTVLEAMDKFL-------------------P---------------------A 218 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS-------------------T---------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCcEEEEecCCCcC-------------------c---------------------c
Confidence 479999999999999999998 688999999632 11 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
++ .++.+.+.+.+++.|| +++++++|+++..++ +...+.+.+
T Consensus 219 ~~------------------------------~~~~~~l~~~l~~~Gv----~v~~~~~v~~i~~~~--~~~~v~~~~-- 260 (476)
T 3lad_A 219 VD------------------------------EQVAKEAQKILTKQGL----KILLGARVTGTEVKN--KQVTVKFVD-- 260 (476)
T ss_dssp SC------------------------------HHHHHHHHHHHHHTTE----EEEETCEEEEEEECS--SCEEEEEES--
T ss_pred cC------------------------------HHHHHHHHHHHHhCCC----EEEECCEEEEEEEcC--CEEEEEEEe--
Confidence 00 1233445566788899 999999999998764 456666653
Q ss_pred CCceEEEEcCeEEEecCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~ 229 (485)
.++...+.+|.||+|+|..+
T Consensus 261 ~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 261 AEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp SSEEEEEEESEEEECSCEEE
T ss_pred CCCcEEEECCEEEEeeCCcc
Confidence 11126799999999999654
No 230
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.53 E-value=0.00057 Score=71.09 Aligned_cols=115 Identities=18% Similarity=0.083 Sum_probs=77.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-.|..+++ .|.+|+++++. .+.+ .
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~----------------------------------------~ 225 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSA--LGSKTSLMIRHDKVLR----------------------------------------S 225 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT----------------------------------------T
T ss_pred ccEEEECCCHHHHHHHHHHHH--cCCeEEEEEeCCcccc----------------------------------------c
Confidence 579999999999999999998 68899999963 2110 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCC-eEEEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGR-KFLLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~-~~~V~~~~~ 208 (485)
++ .++.+.+.+.+++.|| ++++++.|++++.++ ++ .+.|.+.+.
T Consensus 226 ~d------------------------------~~~~~~~~~~l~~~gv----~i~~~~~v~~i~~~~-~~~~~~v~~~~~ 270 (478)
T 3dk9_A 226 FD------------------------------SMISTNCTEELENAGV----EVLKFSQVKEVKKTL-SGLEVSMVTAVP 270 (478)
T ss_dssp SC------------------------------HHHHHHHHHHHHHTTC----EEETTEEEEEEEECS-SSEEEEEEECCT
T ss_pred cC------------------------------HHHHHHHHHHHHHCCC----EEEeCCEEEEEEEcC-CCcEEEEEEccC
Confidence 00 1122345566778899 999999999998764 34 456666531
Q ss_pred cCCc--eEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 209 TMNL--VECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 209 ~~~~--~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
..+. +..+.+|.||+|+|..+....+ ++.+|+++
T Consensus 271 ~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~ 307 (478)
T 3dk9_A 271 GRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQT 307 (478)
T ss_dssp TSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCB
T ss_pred CCCcccceEEEcCEEEEeeccccCCCCCCchhcCCee
Confidence 1111 2689999999999965532212 34445443
No 231
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.51 E-value=0.00067 Score=70.01 Aligned_cols=97 Identities=20% Similarity=0.246 Sum_probs=70.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-.|..+++ .|.+|+++|+.. +.. . .
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------------------------~--------~ 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSN--QNYNVNLIDGHERVLY-------------------------------K--------Y 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSTTT-------------------------------T--------T
T ss_pred CeEEEECcCHHHHHHHHHHHh--cCCEEEEEEcCCchhh-------------------------------h--------h
Confidence 479999999999999999998 688999999642 110 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeE-EEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKF-LLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~-~V~~~~~ 208 (485)
++ .++.+.+.+.+++.|| +++++++|+++..++ +.+ .+.+ +
T Consensus 189 ~~------------------------------~~~~~~l~~~l~~~Gv----~i~~~~~v~~i~~~~--~~v~~v~~-~- 230 (452)
T 2cdu_A 189 FD------------------------------KEFTDILAKDYEAHGV----NLVLGSKVAAFEEVD--DEIITKTL-D- 230 (452)
T ss_dssp SC------------------------------HHHHHHHHHHHHHTTC----EEEESSCEEEEEEET--TEEEEEET-T-
T ss_pred hh------------------------------hhHHHHHHHHHHHCCC----EEEcCCeeEEEEcCC--CeEEEEEe-C-
Confidence 00 1123445566788999 999999999998643 444 3443 3
Q ss_pred cCCceEEEEcCeEEEecCCCch
Q 011458 209 TMNLVECIEADYLLIASGSSQQ 230 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~~ 230 (485)
+.++.+|.||+|+|..+.
T Consensus 231 ----g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 231 ----GKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp ----SCEEEESEEEECCCEEEC
T ss_pred ----CCEEECCEEEECcCCCCC
Confidence 467999999999997653
No 232
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.50 E-value=0.00059 Score=70.35 Aligned_cols=108 Identities=26% Similarity=0.323 Sum_probs=76.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-+|..+++ .|.+|+++|+.. +.. . .
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~-------------~--------------------------~ 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAA--QGKNVTMIVRGERVLR-------------R--------------------------S 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTT-------------T--------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCeEEEEEcCCccch-------------h--------------------------h
Confidence 489999999999999999998 689999999642 110 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
++ .++.+.+.+.+++. | ++++++.|.++..++ ....+.++
T Consensus 188 ~~------------------------------~~~~~~l~~~l~~~-v----~i~~~~~v~~i~~~~--~v~~v~~~--- 227 (449)
T 3kd9_A 188 FD------------------------------KEVTDILEEKLKKH-V----NLRLQEITMKIEGEE--RVEKVVTD--- 227 (449)
T ss_dssp SC------------------------------HHHHHHHHHHHTTT-S----EEEESCCEEEEECSS--SCCEEEET---
T ss_pred cC------------------------------HHHHHHHHHHHHhC-c----EEEeCCeEEEEeccC--cEEEEEeC---
Confidence 00 12233445556666 8 999999999997542 32234333
Q ss_pred CCceEEEEcCeEEEecCCCchhHHHHHHCCCcee
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRLAAQLGHSIV 243 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i~ 243 (485)
+.++.+|.||+|+|..+.. .+++.+|+++.
T Consensus 228 ---g~~i~~D~Vv~a~G~~p~~-~l~~~~gl~~~ 257 (449)
T 3kd9_A 228 ---AGEYKAELVILATGIKPNI-ELAKQLGVRIG 257 (449)
T ss_dssp ---TEEEECSEEEECSCEEECC-HHHHHTTCCBC
T ss_pred ---CCEEECCEEEEeeCCccCH-HHHHhCCccCC
Confidence 5789999999999977642 46778887753
No 233
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.49 E-value=9.2e-05 Score=74.55 Aligned_cols=32 Identities=31% Similarity=0.282 Sum_probs=29.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+||+|||||++|+.||+.|++ .|.+|+|+|+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~--~G~~V~liE~~ 33 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR--LGVPVRLFEMR 33 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEECCT
T ss_pred CCEEEECchHHHHHHHHHHHH--CCCcEEEEecc
Confidence 699999999999999999999 78999999954
No 234
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.49 E-value=0.0001 Score=77.09 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=35.4
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCC-CcEEEEeC-CCCCcceee
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEK-GKPLSKVKI 92 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g-~~V~llE~-~~~g~k~~~ 92 (485)
+.+||+|||||++|+++|+.|++ .| .+|+|+|+ +.+|+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~--~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTE--LGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHH--cCCCCEEEEeCCCCCCCeeee
Confidence 35799999999999999999999 56 79999995 478865543
No 235
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.45 E-value=0.00031 Score=72.79 Aligned_cols=109 Identities=25% Similarity=0.290 Sum_probs=73.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||.+|+-+|..|++ .|.+|+|+|+. .+.. . +
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~---------------~-----------------~------- 210 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRK--LGAQVSVVEARERILP---------------T-----------------Y------- 210 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSST---------------T-----------------S-------
T ss_pred CeEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCCcccc---------------c-----------------c-------
Confidence 579999999999999999998 57899999964 2210 0 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+ .++.+.+.+.+++.|| +++++++|+++.. + + +.+...+
T Consensus 211 -~------------------------------~~~~~~l~~~l~~~gv----~i~~~~~v~~i~~-~--~-v~v~~~~-- 249 (458)
T 1lvl_A 211 -D------------------------------SELTAPVAESLKKLGI----ALHLGHSVEGYEN-G--C-LLANDGK-- 249 (458)
T ss_dssp -C------------------------------HHHHHHHHHHHHHHTC----EEETTCEEEEEET-T--E-EEEECSS--
T ss_pred -C------------------------------HHHHHHHHHHHHHCCC----EEEECCEEEEEEe-C--C-EEEEECC--
Confidence 0 0112234455677899 9999999999975 3 3 4444221
Q ss_pred CCceEEEEcCeEEEecCCCchhHH-HHHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHR-LAAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~-la~~~G~~i 242 (485)
++...+.+|.||+|+|..+.... .++.+|+.+
T Consensus 250 -G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~ 282 (458)
T 1lvl_A 250 -GGQLRLEADRVLVAVGRRPRTKGFNLECLDLKM 282 (458)
T ss_dssp -SCCCEECCSCEEECCCEEECCSSSSGGGSCCCE
T ss_pred -CceEEEECCEEEECcCCCcCCCCCCcHhcCCcc
Confidence 22267999999999997653211 134455543
No 236
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.42 E-value=0.00044 Score=68.82 Aligned_cols=112 Identities=17% Similarity=0.191 Sum_probs=73.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||+|..|+-.|..|++ .+.+|+++++.... . . .+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~-------------~-----~-----------~~~~-------- 204 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIK--NAASVTLVHRGHEF-------------Q-----G-----------HGKT-------- 204 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTT--TSSEEEEECSSSSC-------------S-----S-----------CSHH--------
T ss_pred CcEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCCC-------------C-----C-----------CHHH--------
Confidence 479999999999999999988 57899999864210 0 0 0000
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecC
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 210 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 210 (485)
.+.+.+.+++.|| +++++++|+++..++ +....|.+.. .+
T Consensus 205 ----------------------------------~~~l~~~~~~~gv----~i~~~~~v~~i~~~~-~~v~~v~~~~-~~ 244 (360)
T 3ab1_A 205 ----------------------------------AHEVERARANGTI----DVYLETEVASIEESN-GVLTRVHLRS-SD 244 (360)
T ss_dssp ----------------------------------HHSSHHHHHHTSE----EEESSEEEEEEEEET-TEEEEEEEEE-TT
T ss_pred ----------------------------------HHHHHHHhhcCce----EEEcCcCHHHhccCC-CceEEEEEEe-cC
Confidence 0112334567789 999999999998764 3333555531 12
Q ss_pred CceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 211 NLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 211 ~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+....+.+|.||+|+|..+.. .+++.+|+++
T Consensus 245 g~~~~i~~D~vi~a~G~~p~~-~~l~~~~~~~ 275 (360)
T 3ab1_A 245 GSKWTVEADRLLILIGFKSNL-GPLARWDLEL 275 (360)
T ss_dssp CCEEEEECSEEEECCCBCCSC-GGGGGSSCCE
T ss_pred CCeEEEeCCEEEECCCCCCCH-HHHHhhcccc
Confidence 223689999999999976532 2444555543
No 237
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.40 E-value=0.00013 Score=74.03 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=32.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (485)
++||+|||||++|+++|+.|++ .|.+|+|+|+ +.+|+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE--KGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCcEEEEEecCCcCC
Confidence 4799999999999999999998 6899999995 46764
No 238
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.35 E-value=0.0016 Score=63.43 Aligned_cols=97 Identities=27% Similarity=0.279 Sum_probs=67.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||+|..|+-.|..|++ .+.+|+++++.... . . .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~--~g~~V~~i~~~~~~----------------~--~-----------~----------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSE--YVKNVTIIEYMPKY----------------M--C-----------E----------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTT--TBSEEEEECSSSSC----------------C--S-----------C-----------
T ss_pred CeEEEECCCHHHHHHHHHHHh--hCCcEEEEEcCCcc----------------C--C-----------C-----------
Confidence 479999999999999999998 57899999853200 0 0 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecC
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 210 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 210 (485)
..+.+.+.+.|| +++++++|+++..++ +....|.+.+..+
T Consensus 194 -----------------------------------~~l~~~l~~~gv----~i~~~~~v~~i~~~~-~~v~~v~~~~~~~ 233 (319)
T 3cty_A 194 -----------------------------------NAYVQEIKKRNI----PYIMNAQVTEIVGDG-KKVTGVKYKDRTT 233 (319)
T ss_dssp -----------------------------------HHHHHHHHHTTC----CEECSEEEEEEEESS-SSEEEEEEEETTT
T ss_pred -----------------------------------HHHHHHHhcCCc----EEEcCCeEEEEecCC-ceEEEEEEEEcCC
Confidence 011223446789 999999999998764 2344565542112
Q ss_pred CceEEEEcCeEEEecCCCc
Q 011458 211 NLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 211 ~~~~~i~ad~VIlAtG~~~ 229 (485)
+....+.+|.||+|+|..+
T Consensus 234 g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 234 GEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp CCEEEECCSEEEECCCEEE
T ss_pred CceEEEecCEEEEeeCCcc
Confidence 2235799999999999654
No 239
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.28 E-value=0.0022 Score=62.01 Aligned_cols=97 Identities=22% Similarity=0.285 Sum_probs=67.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||+|..|+-+|..|++ .+.+|+++++.... . .+ .
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~----------------~-~~------------~---------- 183 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAG--IVEHVTLLEFAPEM----------------K-AD------------Q---------- 183 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TBSEEEEECSSSSC----------------C-SC------------H----------
T ss_pred CEEEEECCCHHHHHHHHHHHH--hCCEEEEEEeCccc----------------C-cc------------H----------
Confidence 479999999999999999998 57899999853210 0 00 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHH-CCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~-~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
.+.+.+.+ .|| +++++++|+++..++ +....|.+.+..
T Consensus 184 ------------------------------------~~~~~l~~~~gv----~v~~~~~v~~i~~~~-~~v~~v~~~~~~ 222 (310)
T 1fl2_A 184 ------------------------------------VLQDKLRSLKNV----DIILNAQTTEVKGDG-SKVVGLEYRDRV 222 (310)
T ss_dssp ------------------------------------HHHHHHHTCTTE----EEESSEEEEEEEESS-SSEEEEEEEETT
T ss_pred ------------------------------------HHHHHHhhCCCe----EEecCCceEEEEcCC-CcEEEEEEEECC
Confidence 11223344 588 999999999998764 343356665312
Q ss_pred CCceEEEEcCeEEEecCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~ 229 (485)
.++...+.+|.||+|+|..+
T Consensus 223 ~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 223 SGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp TCCEEEEECSEEEECSCEEE
T ss_pred CCcEEEEEcCEEEEeeCCcc
Confidence 23345799999999999654
No 240
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.26 E-value=0.0024 Score=61.80 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=28.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||+|..|+-.|..|++ .+.+|+++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~ 175 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLAN--ICKKVYLIHRR 175 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHT--TSSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEeeC
Confidence 579999999999999999998 57899999853
No 241
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.24 E-value=0.004 Score=65.46 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=68.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+++|||||..|+-.|..+++ .|.+|+|+++..+.. . +
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~--~G~~Vtlv~~~~~l~-------------~---------------------------~ 248 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAG--IGLDVTVMVRSILLR-------------G---------------------------F 248 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCSST-------------T---------------------------S
T ss_pred CeEEEECCcHHHHHHHHHHHH--cCCeEEEEecccccc-------------c---------------------------C
Confidence 369999999999999999998 688999998632210 0 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCC--CCeEEEEEeee
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNA--GRKFLLKVEKR 208 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~--~~~~~V~~~~~ 208 (485)
+ .++.+.+.+.+++.|| ++++++.|+++...++ ++.+.+....
T Consensus 249 d------------------------------~~~~~~~~~~l~~~GV----~v~~~~~v~~v~~~~~~~~~~~~v~~~~- 293 (519)
T 3qfa_A 249 D------------------------------QDMANKIGEHMEEHGI----KFIRQFVPIKVEQIEAGTPGRLRVVAQS- 293 (519)
T ss_dssp C------------------------------HHHHHHHHHHHHHTTC----EEEESEEEEEEEEEECCTTCEEEEEEEE-
T ss_pred C------------------------------HHHHHHHHHHHHHCCC----EEEeCCeEEEEEEccCCCCceEEEEEEE-
Confidence 0 1123344566778899 9999998888865320 1445555432
Q ss_pred cCCc-eEEEEcCeEEEecCCCc
Q 011458 209 TMNL-VECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~-~~~i~ad~VIlAtG~~~ 229 (485)
.+++ ...+.+|.||+|+|..+
T Consensus 294 ~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 294 TNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp SSSSCEEEEEESEEEECSCEEE
T ss_pred CCCcEEEEEECCEEEEecCCcc
Confidence 1121 24678999999999654
No 242
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.22 E-value=0.0036 Score=61.25 Aligned_cols=111 Identities=18% Similarity=0.205 Sum_probs=74.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||+|..|+-.|..|++ .+.+|+++++...- .. .+ .
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~--~g~~V~~v~~~~~~------------------~~-----------~~----~----- 192 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLD--TARRITLIHRRPQF------------------RA-----------HE----A----- 192 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTT--TSSEEEEECSSSSC------------------CS-----------CH----H-----
T ss_pred CEEEEECCCHHHHHHHHHHHh--hCCEEEEEEcCCcc------------------Cc-----------cH----H-----
Confidence 579999999999999999988 67899999864210 00 00 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecC
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 210 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 210 (485)
..+.+.+.+++.|| +++++++|+++..+ ++...|.+.+..+
T Consensus 193 ---------------------------------~~~~l~~~l~~~gv----~v~~~~~v~~i~~~--~~~~~v~~~~~~~ 233 (335)
T 2zbw_A 193 ---------------------------------SVKELMKAHEEGRL----EVLTPYELRRVEGD--ERVRWAVVFHNQT 233 (335)
T ss_dssp ---------------------------------HHHHHHHHHHTTSS----EEETTEEEEEEEES--SSEEEEEEEETTT
T ss_pred ---------------------------------HHHHHHhccccCCe----EEecCCcceeEccC--CCeeEEEEEECCC
Confidence 01124445677799 99999999999874 3544566542112
Q ss_pred CceEEEEcCeEEEecCCCchhHHHHHHCCCc
Q 011458 211 NLVECIEADYLLIASGSSQQGHRLAAQLGHS 241 (485)
Q Consensus 211 ~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~ 241 (485)
+....+.+|.||+|+|..+.. .+++.+|++
T Consensus 234 g~~~~i~~D~vi~a~G~~p~~-~~l~~~~~~ 263 (335)
T 2zbw_A 234 QEELALEVDAVLILAGYITKL-GPLANWGLA 263 (335)
T ss_dssp CCEEEEECSEEEECCCEEEEC-GGGGGSCCC
T ss_pred CceEEEecCEEEEeecCCCCc-hHhhhccee
Confidence 223689999999999976531 234445544
No 243
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.21 E-value=0.00048 Score=70.94 Aligned_cols=104 Identities=11% Similarity=0.157 Sum_probs=72.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+++|||||..|+-.|..+++ .|.+|+|+|+.. +.. . . .+..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~ll~-------------~---~------------d~~~------- 190 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYE--RGLHPTLIHRSDKINK-------------L---M------------DADM------- 190 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSCCST-------------T---S------------CGGG-------
T ss_pred cEEEEECCccchhhhHHHHHh--cCCcceeeeeeccccc-------------c---c------------cchh-------
Confidence 379999999999999999998 588999999642 210 0 0 0011
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
.+.+.+.+++.|| +++++++|+++.. . .+.+.+
T Consensus 191 -----------------------------------~~~~~~~l~~~gV----~i~~~~~v~~~~~----~--~v~~~~-- 223 (437)
T 4eqs_A 191 -----------------------------------NQPILDELDKREI----PYRLNEEINAING----N--EITFKS-- 223 (437)
T ss_dssp -----------------------------------GHHHHHHHHHTTC----CEEESCCEEEEET----T--EEEETT--
T ss_pred -----------------------------------HHHHHHHhhccce----EEEeccEEEEecC----C--eeeecC--
Confidence 1233455677899 9999999998752 2 245554
Q ss_pred CCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
++.+.+|.||+|+|..+.. .+++..|+.+
T Consensus 224 ---g~~~~~D~vl~a~G~~Pn~-~~~~~~gl~~ 252 (437)
T 4eqs_A 224 ---GKVEHYDMIIEGVGTHPNS-KFIESSNIKL 252 (437)
T ss_dssp ---SCEEECSEEEECCCEEESC-GGGTTSSCCC
T ss_pred ---CeEEeeeeEEEEeceecCc-HHHHhhhhhh
Confidence 6789999999999976532 3445555543
No 244
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.14 E-value=0.0044 Score=59.94 Aligned_cols=108 Identities=18% Similarity=0.232 Sum_probs=74.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||+|..|+-+|..|++ .+.+|+++++.... .. . +
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~--~g~~v~~~~~~~~~-------------~~----~------------~---------- 193 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSS--YSTKVYLIHRRDTF-------------KA----Q------------P---------- 193 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HSSEEEEECSSSSC-------------CS----C------------H----------
T ss_pred CEEEEECCCHHHHHHHHHHHH--hCCeEEEEEeCCCC-------------Cc----C------------H----------
Confidence 579999999999999999998 57889999853210 00 0 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHH-HCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAK-HRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~-~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
.+.+++. +.|| +++++++|+++..++ +...|.+.+..
T Consensus 194 ------------------------------------~~~~~~~~~~gv----~~~~~~~v~~i~~~~--~~~~v~~~~~~ 231 (323)
T 3f8d_A 194 ------------------------------------IYVETVKKKPNV----EFVLNSVVKEIKGDK--VVKQVVVENLK 231 (323)
T ss_dssp ------------------------------------HHHHHHHTCTTE----EEECSEEEEEEEESS--SEEEEEEEETT
T ss_pred ------------------------------------HHHHHHHhCCCc----EEEeCCEEEEEeccC--ceeEEEEEECC
Confidence 0011222 3488 999999999998753 55566665312
Q ss_pred CCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+++...+.+|.||+|+|..+. ..+++.+|+.+
T Consensus 232 ~g~~~~~~~D~vv~a~G~~p~-~~~~~~~g~~~ 263 (323)
T 3f8d_A 232 TGEIKELNVNGVFIEIGFDPP-TDFAKSNGIET 263 (323)
T ss_dssp TCCEEEEECSEEEECCCEECC-HHHHHHTTCCB
T ss_pred CCceEEEEcCEEEEEECCCCC-hhHHhhcCeee
Confidence 233457999999999997765 35677777665
No 245
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.13 E-value=0.0004 Score=75.49 Aligned_cols=39 Identities=15% Similarity=0.364 Sum_probs=34.1
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCc
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (485)
...+||+|||||++|++||+.|++ .|++|+|+|+ +.+|+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~--~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQS--FGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHH--TTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHH--CCCeEEEEecCCCCCC
Confidence 346799999999999999999999 7899999994 56764
No 246
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.09 E-value=0.00046 Score=75.83 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=33.1
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCC
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPL 87 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g 87 (485)
...+||+|||||++|++||+.|++ .|++|+|+|+. .+|
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~--~G~~Vtlie~~~~~G 425 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLME--SGYTVHLTDTAEKIG 425 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcC
Confidence 346899999999999999999999 68999999965 554
No 247
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.05 E-value=0.0056 Score=59.71 Aligned_cols=96 Identities=19% Similarity=0.182 Sum_probs=65.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||+|..|+-+|..|++ .+.+|+++++.... .. . +
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~----------------~~-~------------~---------- 191 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTK--FADEVTVIHRRDTL----------------RA-N------------K---------- 191 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TCSEEEEECSSSSC----------------CS-C------------H----------
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEeCCCcC----------------Cc-c------------h----------
Confidence 479999999999999999998 57899999863210 00 0 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHH-HCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAK-HRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~-~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
.+.+++. +.|| +++++++|+++..+ +....|.+.+..
T Consensus 192 ------------------------------------~~~~~l~~~~gv----~i~~~~~v~~i~~~--~~v~~v~~~~~~ 229 (325)
T 2q7v_A 192 ------------------------------------VAQARAFANPKM----KFIWDTAVEEIQGA--DSVSGVKLRNLK 229 (325)
T ss_dssp ------------------------------------HHHHHHHTCTTE----EEECSEEEEEEEES--SSEEEEEEEETT
T ss_pred ------------------------------------HHHHHHHhcCCc----eEecCCceEEEccC--CcEEEEEEEECC
Confidence 0111222 3588 99999999999865 344456654211
Q ss_pred CCceEEEEcCeEEEecCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~ 229 (485)
++....+.+|.||+|+|..+
T Consensus 230 ~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 230 TGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp TCCEEEEECSEEEECSCEEE
T ss_pred CCcEEEEEcCEEEEccCCCC
Confidence 22335799999999999655
No 248
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.04 E-value=0.00054 Score=76.29 Aligned_cols=38 Identities=16% Similarity=0.399 Sum_probs=33.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEe-CCCCCc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE-KGKPLS 88 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE-~~~~g~ 88 (485)
..+||+|||||++||+||+.|++ .|++|+|+| +..+|+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~--~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQS--FGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEecCcCCC
Confidence 45799999999999999999999 789999999 456775
No 249
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.02 E-value=0.0029 Score=62.76 Aligned_cols=104 Identities=14% Similarity=0.190 Sum_probs=69.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||+|.+|+-+|..|++ .+.+|+++++.. +.. . . .+ +.+ .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~--~g~~V~lv~~~~~~~~-------------~-~-~d------------~~~------~ 211 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAK--NGSDIALYTSTTGLND-------------P-D-AD------------PSV------R 211 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECC-------------------------------------CTT------S
T ss_pred CEEEEECCCcCHHHHHHHHHh--cCCeEEEEecCCCCCC-------------C-C-CC------------CCc------c
Confidence 479999999999999999998 678999999642 110 0 0 00 000 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCC-CCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRG-VAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~G-V~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
+ ...+.+.+.+.+++.| | +++.+++|.++..++ +.+.|.+.+
T Consensus 212 -------------------------~-----~~~~~~~l~~~l~~~g~v----~~~~~~~v~~i~~~~--~~~~v~~~~- 254 (369)
T 3d1c_A 212 -------------------------L-----SPYTRQRLGNVIKQGARI----EMNVHYTVKDIDFNN--GQYHISFDS- 254 (369)
T ss_dssp -------------------------C-----CHHHHHHHHHHHHTTCCE----EEECSCCEEEEEEET--TEEEEEESS-
T ss_pred -------------------------C-----CHHHHHHHHHHHhhCCcE----EEecCcEEEEEEecC--CceEEEecC-
Confidence 0 0122344555567776 9 999999999997653 556777654
Q ss_pred cCCceEEEE-cCeEEEecCCCch
Q 011458 209 TMNLVECIE-ADYLLIASGSSQQ 230 (485)
Q Consensus 209 ~~~~~~~i~-ad~VIlAtG~~~~ 230 (485)
+..+. +|.||+|+|..+.
T Consensus 255 ----g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 255 ----GQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp ----SCCEEESSCCEECCCBCGG
T ss_pred ----CeEeccCCceEEeeccCCc
Confidence 44454 6999999998765
No 250
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.02 E-value=0.0035 Score=61.29 Aligned_cols=98 Identities=20% Similarity=0.169 Sum_probs=67.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
..+|+|||+|..|+-+|..|++ .+.+|+++++.... .. .+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~----------------~~-------------~~--------- 198 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTK--YGSKVYIIHRRDAF----------------RA-------------SK--------- 198 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TSSEEEEECSSSSC----------------CS-------------CH---------
T ss_pred CCeEEEECCChHHHHHHHHHHh--cCCeEEEEecCCcC----------------Cc-------------cH---------
Confidence 3579999999999999999988 57899999964210 00 00
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHH-HHHHHCCCCCccEEEeCceEEEEEEcCCC--CeEEEEEe
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLL-TEAKHRGVAPSVVLQTGKVVTTASSDNAG--RKFLLKVE 206 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~-~~l~~~GV~~~~~i~~~~~V~~i~~~~~~--~~~~V~~~ 206 (485)
.+. +.+++.|| +++++++|+++..++ + ....|.+.
T Consensus 199 -------------------------------------~~~~~~~~~~gv----~i~~~~~v~~i~~~~-~~~~v~~v~~~ 236 (333)
T 1vdc_A 199 -------------------------------------IMQQRALSNPKI----DVIWNSSVVEAYGDG-ERDVLGGLKVK 236 (333)
T ss_dssp -------------------------------------HHHHHHHTCTTE----EEECSEEEEEEEESS-SSSSEEEEEEE
T ss_pred -------------------------------------HHHHHHHhCCCe----eEecCCceEEEeCCC-CccceeeEEEE
Confidence 001 11245688 999999999998754 2 33345554
Q ss_pred eecCCceEEEEcCeEEEecCCCc
Q 011458 207 KRTMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 207 ~~~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..++...++.+|.||+|+|..+
T Consensus 237 ~~~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 237 NVVTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp ETTTCCEEEEECSEEEECSCEEE
T ss_pred ecCCCceEEEecCEEEEEeCCcc
Confidence 21123346899999999999654
No 251
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.00 E-value=0.0093 Score=63.75 Aligned_cols=32 Identities=13% Similarity=0.068 Sum_probs=28.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLAS--LGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCEEEEEECC
Confidence 479999999999999999998 67899999964
No 252
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.98 E-value=0.0052 Score=59.24 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=65.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||+|..|+-+|..|++ .+.+|+++++.... . . .+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~--~g~~v~~~~~~~~~----------------~--~-----------~~---------- 186 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLAN--ICSKIYLIHRRDEF----------------R--A-----------AP---------- 186 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHT--TSSEEEEECSSSSC----------------B--S-----------CH----------
T ss_pred CEEEEECCCHHHHHHHHHHHh--hCCEEEEEEeCCCC----------------C--C-----------CH----------
Confidence 579999999999999999998 57899999853210 0 0 00
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecC
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTM 210 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~ 210 (485)
..+.+.+++.|| +++++++|+++..++ +....|.+.. .+
T Consensus 187 -----------------------------------~~~~~~~~~~gv----~~~~~~~v~~i~~~~-~~~~~v~~~~-~~ 225 (315)
T 3r9u_A 187 -----------------------------------STVEKVKKNEKI----ELITSASVDEVYGDK-MGVAGVKVKL-KD 225 (315)
T ss_dssp -----------------------------------HHHHHHHHCTTE----EEECSCEEEEEEEET-TEEEEEEEEC-TT
T ss_pred -----------------------------------HHHHHHHhcCCe----EEEeCcEEEEEEcCC-CcEEEEEEEc-CC
Confidence 001112245688 999999999998764 3334455541 22
Q ss_pred CceEEEEcCeEEEecCCC
Q 011458 211 NLVECIEADYLLIASGSS 228 (485)
Q Consensus 211 ~~~~~i~ad~VIlAtG~~ 228 (485)
+...++.+|.||+|+|..
T Consensus 226 g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 226 GSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp SCEEEECCSCEEECSCEE
T ss_pred CCeEEeecCeEEEEEcCC
Confidence 333589999999999954
No 253
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.98 E-value=0.0042 Score=60.44 Aligned_cols=108 Identities=18% Similarity=0.155 Sum_probs=73.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
..+|+|||+|..|+-+|..|++ .+.+|+++++...- . . . ...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~--~~~~v~~~~~~~~~----------------~--~--------------~-~~~--- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEP--IAKEVSIIHRRDKF----------------R--A--------------H-EHS--- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT--TBSEEEEECSSSSC----------------S--S--------------C-HHH---
T ss_pred CCEEEEECCCHhHHHHHHHHHh--hCCeEEEEEecCcC----------------C--c--------------c-HHH---
Confidence 3579999999999999999998 57889999853110 0 0 0 000
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
.+.+++.|| +++.+++|+++..++ +...|.+.+..
T Consensus 196 ---------------------------------------~~~l~~~gv----~~~~~~~v~~i~~~~--~~~~v~~~~~~ 230 (332)
T 3lzw_A 196 ---------------------------------------VENLHASKV----NVLTPFVPAELIGED--KIEQLVLEEVK 230 (332)
T ss_dssp ---------------------------------------HHHHHHSSC----EEETTEEEEEEECSS--SCCEEEEEETT
T ss_pred ---------------------------------------HHHHhcCCe----EEEeCceeeEEecCC--ceEEEEEEecC
Confidence 122567899 999999999998764 45556665423
Q ss_pred CCceEEEEcCeEEEecCCCchhHHHHHHCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRLAAQLGHS 241 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~ 241 (485)
.+.+..+.+|.||+|+|..+.. .+++.+|++
T Consensus 231 ~g~~~~~~~D~vv~a~G~~p~~-~~~~~~~~~ 261 (332)
T 3lzw_A 231 GDRKEILEIDDLIVNYGFVSSL-GPIKNWGLD 261 (332)
T ss_dssp SCCEEEEECSEEEECCCEECCC-GGGGGSSCC
T ss_pred CCceEEEECCEEEEeeccCCCc-hHHhhcCcc
Confidence 3445789999999999965431 234444444
No 254
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.89 E-value=0.0026 Score=65.89 Aligned_cols=111 Identities=19% Similarity=0.193 Sum_probs=71.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC-CCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG-KPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~-~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
.+|+|||||..|+-.|..+++ .|.+|+++++. .+.. . .+
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~-------------~------------------~~------- 212 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRL--MGVQTHIIEMLDRALI-------------T------------------LE------- 212 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCT-------------T------------------SC-------
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCcCCC-------------C------------------CC-------
Confidence 579999999999999999998 68899999963 2210 0 00
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
+ .++.+.+.+.++ | +++.+++|+++..++ ++.+.|.+.+ .
T Consensus 213 -d------------------------------~~~~~~l~~~l~---v----~i~~~~~v~~i~~~~-~~~v~v~~~~-~ 252 (466)
T 3l8k_A 213 -D------------------------------QDIVNTLLSILK---L----NIKFNSPVTEVKKIK-DDEYEVIYST-K 252 (466)
T ss_dssp -C------------------------------HHHHHHHHHHHC---C----CEECSCCEEEEEEEE-TTEEEEEECC-T
T ss_pred -C------------------------------HHHHHHHHhcCE---E----EEEECCEEEEEEEcC-CCcEEEEEEe-c
Confidence 0 001112222222 7 999999999998652 2556666651 1
Q ss_pred CCceEEEEcCeEEEecCCCchhHHH-HHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRL-AAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~l-a~~~G~~i 242 (485)
+++..++.+|.||+|+|..+... + ++.+|+++
T Consensus 253 ~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~ 285 (466)
T 3l8k_A 253 DGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSI 285 (466)
T ss_dssp TSCCEEEEESCEEECCCEEECCC-TTTGGGTCCB
T ss_pred CCceEEEEcCEEEECcCCCcccc-cchhhcCcee
Confidence 22235899999999999765433 3 45556554
No 255
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.84 E-value=0.0047 Score=60.64 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=28.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||+|..|+-.|..|++ .+.+|+++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~--~g~~V~l~~~~ 187 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTR--FARSVTLVHRR 187 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTT--TCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHH--hCCeEEEEEcC
Confidence 579999999999999999998 57899999853
No 256
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.82 E-value=0.00085 Score=69.61 Aligned_cols=35 Identities=34% Similarity=0.429 Sum_probs=30.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+||+|||||++|+.+|..|++.+++.+|+|+|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 57999999999999999999985444999999965
No 257
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.82 E-value=0.0031 Score=66.74 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|.+|+-+|..|++ .+.+|+++++.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~ 210 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAP--EVEHLTVFVRT 210 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TCSEEEEEESS
T ss_pred cceEEEECCCchHHHHHHHHHh--hCCEEEEEECC
Confidence 4589999999999999999998 67899999965
No 258
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.67 E-value=0.0013 Score=75.10 Aligned_cols=38 Identities=18% Similarity=0.170 Sum_probs=32.7
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC-CCCc
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG-KPLS 88 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~-~~g~ 88 (485)
..+||+|||||+||++||++|++ .|+ +|+|+|+. .+|+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~--~G~~~Vtv~E~~~~~GG 225 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR--LGYSDITIFEKQEYVGG 225 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH--TTCCCEEEEESSSSCST
T ss_pred CCCEEEEECccHHHHHHHHHHHh--cCCCcEEEEeCCCCCCc
Confidence 35799999999999999999999 677 79999965 5553
No 259
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.55 E-value=0.013 Score=61.70 Aligned_cols=97 Identities=18% Similarity=0.253 Sum_probs=66.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
.+|+|||||.+|+-+|..|++ .+.+|+++++.... . . .
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~--~g~~Vtlv~~~~~l-------------~-----~-----------~----------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAG--IVEHVTLLEFAPEM-------------K-----A-----------D----------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--HBSEEEEECSSSSC-------------C-----S-----------C-----------
T ss_pred CeEEEECCCHHHHHHHHHHHh--hCCEEEEEEeCccc-------------C-----c-----------C-----------
Confidence 579999999999999999998 57899999853210 0 0 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHH-CCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKH-RGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~-~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
..+.+.+.+ .|| ++++++.|+++..++ +....|.+.+..
T Consensus 394 -----------------------------------~~l~~~l~~~~gV----~v~~~~~v~~i~~~~-~~v~~v~~~~~~ 433 (521)
T 1hyu_A 394 -----------------------------------QVLQDKVRSLKNV----DIILNAQTTEVKGDG-SKVVGLEYRDRV 433 (521)
T ss_dssp -----------------------------------HHHHHHHTTCTTE----EEECSEEEEEEEECS-SSEEEEEEEETT
T ss_pred -----------------------------------HHHHHHHhcCCCc----EEEeCCEEEEEEcCC-CcEEEEEEEeCC
Confidence 011122333 478 999999999998754 344456665322
Q ss_pred CCceEEEEcCeEEEecCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~ 229 (485)
.+....+.+|.||+|+|..+
T Consensus 434 ~g~~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 434 SGDIHSVALAGIFVQIGLLP 453 (521)
T ss_dssp TCCEEEEECSEEEECCCEEE
T ss_pred CCceEEEEcCEEEECcCCCC
Confidence 23345799999999999644
No 260
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.54 E-value=0.0053 Score=65.01 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|++|+-.|..|++ .+.+|+|+++.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~--~~~~Vtv~~r~ 217 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAE--TAKELYVFQRT 217 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTT--TBSEEEEEESS
T ss_pred CCeEEEECCCccHHHHHHHHHh--hCCEEEEEEcC
Confidence 4689999999999999999998 57899999965
No 261
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.54 E-value=0.0076 Score=63.12 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCc--eEEEEcCeEEEecCCCc
Q 011458 162 SSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL--VECIEADYLLIASGSSQ 229 (485)
Q Consensus 162 ~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~--~~~i~ad~VIlAtG~~~ 229 (485)
..+.+.+.+.+++.|| ++++++.|++++. +...+.... .++. ++++.+|.||.|+|..+
T Consensus 272 ~~~~~~~~~~L~~~GV----~v~~~~~v~~v~~----~~~~~~~~~-~dg~~~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSI----KVHLRTAVAKVEE----KQLLAKTKH-EDGKITEETIPYGTLIWATGNKA 332 (502)
T ss_dssp HHHHHHHHHHHHHTTC----EEETTEEEEEECS----SEEEEEEEC-TTSCEEEEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHHhcce----eeecCceEEEEeC----CceEEEEEe-cCcccceeeeccCEEEEccCCcC
Confidence 4455666778899999 9999999999853 333333321 1111 35799999999999654
No 262
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.50 E-value=0.0029 Score=60.48 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=68.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
..+|+|||+|..|+-.|..|++ .+ +|+++++... . +.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~--~g-~v~~v~~~~~-----------------~-----------------~~------ 177 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPD--WG-ETTFFTNGIV-----------------E-----------------PD------ 177 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGG--TS-EEEEECTTTC-----------------C-----------------CC------
T ss_pred CCEEEEEecCccHHHHHHHhhh--cC-cEEEEECCCC-----------------C-----------------CC------
Confidence 3579999999999999999998 46 8988874311 0 00
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
..+.+.+++.|| +++. ++|+++..+ + .|.+.+
T Consensus 178 ------------------------------------~~~~~~l~~~gv----~i~~-~~v~~i~~~---~--~v~~~~-- 209 (297)
T 3fbs_A 178 ------------------------------------ADQHALLAARGV----RVET-TRIREIAGH---A--DVVLAD-- 209 (297)
T ss_dssp ------------------------------------HHHHHHHHHTTC----EEEC-SCEEEEETT---E--EEEETT--
T ss_pred ------------------------------------HHHHHHHHHCCc----EEEc-ceeeeeecC---C--eEEeCC--
Confidence 011234566789 9985 889988632 2 566665
Q ss_pred CCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 210 MNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+..+.+|.||+|+|..+.. .+++.+|+++
T Consensus 210 ---g~~~~~D~vi~a~G~~p~~-~~~~~~g~~~ 238 (297)
T 3fbs_A 210 ---GRSIALAGLFTQPKLRITV-DWIEKLGCAV 238 (297)
T ss_dssp ---SCEEEESEEEECCEEECCC-SCHHHHTCCE
T ss_pred ---CCEEEEEEEEEccCcccCc-hhHHhcCCcc
Confidence 5789999999999965432 3455566554
No 263
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.43 E-value=0.023 Score=58.71 Aligned_cols=51 Identities=16% Similarity=0.102 Sum_probs=33.4
Q ss_pred CCCCCccEEEeCceEEEEEEcCCC-CeEEEEEeeec------------CCceEEEEcCeEEEecCCCc
Q 011458 175 RGVAPSVVLQTGKVVTTASSDNAG-RKFLLKVEKRT------------MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 175 ~GV~~~~~i~~~~~V~~i~~~~~~-~~~~V~~~~~~------------~~~~~~i~ad~VIlAtG~~~ 229 (485)
.|| ++++++.+.+|..++++ ....|++.... ++....+.+|.||.|+|-.+
T Consensus 270 ~gv----~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAW----GLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEE----EEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceE----EEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 789 99999999999765211 22234332100 12236899999999999655
No 264
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.35 E-value=0.0013 Score=71.41 Aligned_cols=61 Identities=16% Similarity=0.115 Sum_probs=40.9
Q ss_pred CCChHHHHHHHHHHHHHCCCCCccEEEeCceEE--EEEEcCCCC------eEEEEEeeecCCceEEEEcCeEEEecC
Q 011458 158 SDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVT--TASSDNAGR------KFLLKVEKRTMNLVECIEADYLLIASG 226 (485)
Q Consensus 158 ~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~--~i~~~~~~~------~~~V~~~~~~~~~~~~i~ad~VIlAtG 226 (485)
......+.+.|.+.+.+ |. .|+++++|+ +|..++ ++ .+.|.... .+...++.||.||+|+-
T Consensus 343 ~GG~~~L~~aLa~~l~~-g~----~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~--~G~~~~~~aD~VIvTvP 411 (721)
T 3ayj_A 343 VTENVEFIRNLFLKAQN-VG----AGKLVVQVRQERVANAC-HSGTASARAQLLSYDS--HNAVHSEAYDFVILAVP 411 (721)
T ss_dssp SSSTHHHHHHHHHHHHH-HT----TTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEET--TCCEEEEEESEEEECSC
T ss_pred CCcHHHHHHHHHHhccc-CC----ceEeCCEEEeeeEEECC-CCCccccceEEEEEec--CCceEEEEcCEEEECCC
Confidence 34567788888888743 33 467789999 998764 23 36664431 22234799999999875
No 265
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.20 E-value=0.011 Score=60.96 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=28.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
..+|+|||||..|+-+|..+.+ .|. +|+++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r--~Ga~~Vtiv~r~ 297 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIR--QGATSVKCLYRR 297 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CCEEEEECCChhHHHHHHHHHH--cCCCEEEEEEeC
Confidence 4589999999999999999988 566 59999853
No 266
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.13 E-value=0.017 Score=59.58 Aligned_cols=22 Identities=27% Similarity=0.185 Sum_probs=19.8
Q ss_pred CCcEEEECcchHHHHHHHHHhc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKT 71 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~ 71 (485)
...|+|||+|..|+-+|..|++
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~ 168 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLT 168 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHh
Confidence 3579999999999999999886
No 267
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.74 E-value=0.11 Score=49.90 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~--~G~~Vt~v~~~ 184 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTK--YGSKVIILHRR 184 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTT--TSSEEEEECSS
T ss_pred CeEEEECCChHHHHHHHHHHH--hCCeeeeeccc
Confidence 579999999999999999998 68999999953
No 268
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.73 E-value=0.065 Score=61.02 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=28.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
.+|+|||||..|+-+|..+++ .|. +|+|+++.
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~--~G~~~Vtvv~r~ 365 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALR--CGARRVFLVFRK 365 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CcEEEECCChHHHHHHHHHHH--cCCCEEEEEEec
Confidence 389999999999999999998 565 89999963
No 269
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.53 E-value=0.013 Score=62.99 Aligned_cols=65 Identities=12% Similarity=0.104 Sum_probs=49.5
Q ss_pred CeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCC-CCeEEEEEeeecCCceEEEEcCeEEEecC
Q 011458 152 GRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNA-GRKFLLKVEKRTMNLVECIEADYLLIASG 226 (485)
Q Consensus 152 g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~-~~~~~V~~~~~~~~~~~~i~ad~VIlAtG 226 (485)
+..||..+ ...+.++|.+.++..|+ +|+++++|++|..+++ +...+|++.+ |+.+.||.||....
T Consensus 369 g~~yp~GG-~g~L~qaL~r~~~~~Gg----~i~l~~~V~~I~~~~~~g~v~gV~~~~-----Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 369 PFLFPLYG-QGELPQCFCRMCAVFGG----IYCLRHSVQCLVVDKESRKCKAVIDQF-----GQRIISKHFIIEDS 434 (650)
T ss_dssp SEEEETTC-TTHHHHHHHHHHHHTTC----EEESSCCEEEEEEETTTCCEEEEEETT-----SCEEECSEEEEEGG
T ss_pred ceEEeCCc-hhHHHHHHHHHHHHcCC----EEEeCCEeeEEEEeCCCCeEEEEEeCC-----CCEEEcCEEEEChh
Confidence 45677553 67889999999999999 9999999999987641 2345565544 67899999987544
No 270
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.34 E-value=0.087 Score=59.54 Aligned_cols=104 Identities=20% Similarity=0.188 Sum_probs=70.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhcC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSLH 130 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (485)
..|+|||+|..|+-+|..|++ .|.+|+|+|+.... . .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~--~G~~Vtvv~~~~~~----------------------------------~-~------ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAA--TGGVVAVIDARSSI----------------------------------S-A------ 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGG--GTCCSEEEESCSSC----------------------------------C-H------
T ss_pred CeEEEEcCCHHHHHHHHHHHH--cCCcEEEEECCCcc----------------------------------c-h------
Confidence 479999999999999999998 57789999953100 0 0
Q ss_pred ChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEc-CCCCeEEEEEeee-
Q 011458 131 GPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSD-NAGRKFLLKVEKR- 208 (485)
Q Consensus 131 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~-~~~~~~~V~~~~~- 208 (485)
. .+.+++.|| +|++++.|+++..+ + +....|++.+.
T Consensus 322 ---~----------------------------------~~~l~~~GV----~v~~~~~v~~i~~~~~-~~v~~v~~~~~~ 359 (965)
T 2gag_A 322 ---A----------------------------------AAQAVADGV----QVISGSVVVDTEADEN-GELSAIVVAELD 359 (965)
T ss_dssp ---H----------------------------------HHHHHHTTC----CEEETEEEEEEEECTT-SCEEEEEEEEEC
T ss_pred ---h----------------------------------HHHHHhCCe----EEEeCCEeEEEeccCC-CCEEEEEEEecc
Confidence 0 123567899 99999999999873 2 34334554320
Q ss_pred c---CCceEEEEcCeEEEecCCCchhHHHHHHCCC
Q 011458 209 T---MNLVECIEADYLLIASGSSQQGHRLAAQLGH 240 (485)
Q Consensus 209 ~---~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~ 240 (485)
. .++..++.+|.||+|+|-.+. ..++...+.
T Consensus 360 ~~~~~G~~~~i~~D~Vv~a~G~~P~-~~l~~~~~g 393 (965)
T 2gag_A 360 EARELGGTQRFEADVLAVAGGFNPV-VHLHSQRQG 393 (965)
T ss_dssp TTCCEEEEEEEECSEEEEECCEEEC-CHHHHHTTC
T ss_pred ccCCCCceEEEEcCEEEECCCcCcC-hHHHHhCCC
Confidence 0 112368999999999997654 245555543
No 271
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.30 E-value=0.018 Score=60.94 Aligned_cols=33 Identities=12% Similarity=0.273 Sum_probs=29.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|++|+-+|..|++ .+.+|+++++.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~ 223 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAE--QAEQLFVFQRS 223 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HBSEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHh--hCCEEEEEECC
Confidence 4589999999999999999998 57899999965
No 272
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.88 E-value=0.17 Score=55.30 Aligned_cols=32 Identities=16% Similarity=0.019 Sum_probs=28.7
Q ss_pred CcEEEEC--cchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVG--GGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIG--gG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+||| ||..|+-+|..|++ .|.+|+|+++.
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~--~G~~Vtlv~~~ 562 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLAT--AGHEVTIVSGV 562 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CeEEEEcCCCCchHHHHHHHHHH--cCCEEEEEecc
Confidence 4899999 99999999999998 67899999964
No 273
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.74 E-value=0.031 Score=57.29 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=28.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCc-EEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLN-VVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~-V~llE~~ 84 (485)
..+|+|||+|.+|+-.|..|++ .+.+ |+|+++.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~--~~~~~V~l~~r~ 245 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTP--VAKHPIYQSLLG 245 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTT--TSCSSEEEECTT
T ss_pred CCEEEEEccCcCHHHHHHHHHH--HhCCcEEEEeCC
Confidence 3579999999999999999998 5677 9998863
No 274
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.72 E-value=0.24 Score=51.57 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
++|+|||+|.+|.-.|..|++..++.+|+++=|.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~ 280 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRD 280 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCC
Confidence 4699999999999999999875457889998864
No 275
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.30 E-value=0.064 Score=45.52 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=30.3
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
....|+|||+|..|...|..|.+ .|.+|+++|++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~ 39 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETS 39 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 34579999999999999999998 68999999965
No 276
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.39 E-value=0.089 Score=45.37 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=29.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||+|..|...|..|.+ .|.+|+++|++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 3579999999999999999988 67899999964
No 277
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.27 E-value=0.086 Score=44.00 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
++|+|||+|..|...|..|++ .|.+|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~--~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE--KGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 579999999999999999998 67999999964
No 278
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.62 E-value=0.13 Score=43.30 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=29.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|+|+|+|..|...|..|.+ .|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~--~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTA--AGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCeEEEEECC
Confidence 479999999999999999998 68999999965
No 279
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.07 E-value=0.14 Score=41.31 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=29.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCC-CcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g-~~V~llE~~ 84 (485)
...|+|+|+|..|...+..|.+ .| .+|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~--~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT--SSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--CSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 3579999999999999999998 57 899999965
No 280
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=91.91 E-value=0.13 Score=49.49 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=28.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~ 177 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTK--FADKVTIVHRR 177 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEecc
Confidence 479999999999999999998 68999999963
No 281
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.48 E-value=0.19 Score=44.42 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=29.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCC-CCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAP-KLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~-g~~V~llE~~ 84 (485)
...|+|||+|..|...|..|.+ . |++|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECC
Confidence 4579999999999999999988 6 7899999965
No 282
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=91.28 E-value=0.072 Score=49.31 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=32.5
Q ss_pred cccccCCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHh
Q 011458 430 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLS 475 (485)
Q Consensus 430 t~esk~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~ 475 (485)
+++.+.+||||+||++. +.| ..++|+-+|+.+|.++.+.+
T Consensus 192 ~~~~t~~p~iya~G~~a-~~g-----~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 192 TFRLKRLEGLYAVGLCV-REG-----DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTEETTSBSEEECGGGT-SCC-----CHHHHHHHHHHHHHHHHHHC
T ss_pred cccccccccceeeeecc-cCc-----cHHHHHHHHHHHHHHHHhhc
Confidence 45556999999999888 655 66788999999999987653
No 283
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.26 E-value=0.14 Score=51.48 Aligned_cols=32 Identities=19% Similarity=0.066 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~--~g~~Vtvv~~~ 178 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIID--SGTPASIGIIL 178 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--HTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCeEEEEEcC
Confidence 479999999999999999998 57899999964
No 284
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.07 E-value=0.26 Score=42.16 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|+|+|+|..|...|..|.+ .|.+|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~--~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQ--RGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 469999999999999999998 68999999974
No 285
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.83 E-value=0.22 Score=41.55 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=28.5
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|+|+|+|..|...|..|.+ .|.+|+++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~--~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR--MGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 369999999999999999998 57899999964
No 286
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=90.48 E-value=0.51 Score=45.15 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=37.8
Q ss_pred HHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 172 AKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 172 l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+.+.|+ +++.+ .|+.+..++ +....|++.+ +.++.+|.+|+++|+.+.. .++..+|+++
T Consensus 190 l~~~g~----~~~~~-~v~~~~~~~-~~~~~v~~~~-----g~~i~~~~~vi~~g~~~~~-~~~~~~g~~~ 248 (304)
T 4fk1_A 190 LSNKNI----PVITE-SIRTLQGEG-GYLKKVEFHS-----GLRIERAGGFIVPTFFRPN-QFIEQLGCEL 248 (304)
T ss_dssp HHTTTC----CEECS-CEEEEESGG-GCCCEEEETT-----SCEECCCEEEECCEEECSS-CHHHHTTCCC
T ss_pred hhccce----eEeee-eEEEeecCC-Ceeeeeeccc-----cceeeecceeeeeccccCC-hhhhhcCeEE
Confidence 344566 77665 466666543 3334567765 6788899999998865432 3567777765
No 287
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.33 E-value=0.26 Score=51.12 Aligned_cols=61 Identities=15% Similarity=0.106 Sum_probs=48.3
Q ss_pred HHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCce
Q 011458 170 TEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHSI 242 (485)
Q Consensus 170 ~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~i 242 (485)
+.+++.|| +|++++.|+++..++ +...|.+.+ +.++.+|.||+|+|-.+. ..+++.+|+++
T Consensus 265 ~~l~~~GV----~v~~~~~v~~i~~~~--~v~~v~~~~-----g~~i~aD~Vv~a~G~~p~-~~l~~~~g~~~ 325 (493)
T 1y56_A 265 QELERWGI----DYVHIPNVKRVEGNE--KVERVIDMN-----NHEYKVDALIFADGRRPD-INPITQAGGKL 325 (493)
T ss_dssp HHHHHHTC----EEEECSSEEEEECSS--SCCEEEETT-----CCEEECSEEEECCCEEEC-CHHHHHTTCCE
T ss_pred HHHHhCCc----EEEeCCeeEEEecCC--ceEEEEeCC-----CeEEEeCEEEECCCcCcC-chHHHhcCCCc
Confidence 67788999 999999999998653 444566654 578999999999997765 35788888875
No 288
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.28 E-value=0.28 Score=47.32 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=29.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~--~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA--TGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 3579999999999999999998 68999999964
No 289
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.03 E-value=0.26 Score=48.01 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=29.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
.+|.|||+|..|.+.|..|++ .|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK--TGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH--TTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCeEEEEeCCh
Confidence 579999999999999999998 689999999764
No 290
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.76 E-value=0.3 Score=44.49 Aligned_cols=31 Identities=32% Similarity=0.491 Sum_probs=28.6
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.|+|||+|..|...|..|.+ .|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~--~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS--RKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 69999999999999999998 68999999965
No 291
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.74 E-value=0.48 Score=48.63 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=29.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~--aG~~V~l~D~~ 86 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGL--AGIETFLVVRN 86 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCeEEEEECc
Confidence 4579999999999999999998 78999999965
No 292
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.50 E-value=0.26 Score=47.77 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=29.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
.+|.|||+|..|.+.|..|++ .|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR--SGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH--TSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCc
Confidence 579999999999999999998 688999999764
No 293
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.10 E-value=0.31 Score=47.54 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=29.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|..-|..++. .|++|+|+|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~--~G~~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHh--CCCeEEEEECC
Confidence 3579999999999999999998 79999999954
No 294
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.05 E-value=0.39 Score=47.67 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||+|..|.+.|..|++ .|++|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~--~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR--KGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT--TTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 4589999999999999999998 68999999975
No 295
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=88.92 E-value=1.1 Score=47.96 Aligned_cols=39 Identities=15% Similarity=0.131 Sum_probs=34.6
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEe-CCCCCc
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE-KGKPLS 88 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE-~~~~g~ 88 (485)
+++|||+|||+|..|...|..|++ .|.+|++|| ++..|+
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~--~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSR--SGQRVLHVDSRSYYGG 45 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHh--CCCEEEEEcCCCcccC
Confidence 457999999999999999999999 799999999 557774
No 296
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=88.91 E-value=0.31 Score=49.80 Aligned_cols=32 Identities=25% Similarity=0.123 Sum_probs=29.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~ 199 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVING--LGAKTHLFEMF 199 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--cCCEEEEEEeC
Confidence 479999999999999999998 68999999964
No 297
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=88.91 E-value=0.19 Score=51.12 Aligned_cols=108 Identities=14% Similarity=0.218 Sum_probs=68.8
Q ss_pred CCcEEEECcchHHHHHHHHHhc-cCCCCcEEEEeCCCCCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhh
Q 011458 50 EELLVVVGGGAAGVYGAIRAKT-VAPKLNVVIIEKGKPLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFS 128 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~-~~~g~~V~llE~~~~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (485)
++||+|||||++|+++|..|++ ..++.+|+|||+...- .. .+ .+......
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~-------------~~---~~-------------~~~~~~~g 54 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF-------------QF---VP-------------SNPWVGVG 54 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE-------------EC---GG-------------GHHHHHHT
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC-------------cc---cC-------------CccccccC
Confidence 4699999999999999999987 2247899999965310 00 00 00000000
Q ss_pred cCChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee
Q 011458 129 LHGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR 208 (485)
Q Consensus 129 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~ 208 (485)
... ..++...+.+.+++.|| +++. .+|+.++.++ . .|.+++
T Consensus 55 ~~~-----------------------------~~~~~~~l~~~~~~~gv----~~~~-~~v~~id~~~--~--~V~~~~- 95 (437)
T 3sx6_A 55 WKE-----------------------------RDDIAFPIRHYVERKGI----HFIA-QSAEQIDAEA--Q--NITLAD- 95 (437)
T ss_dssp SSC-----------------------------HHHHEEECHHHHHTTTC----EEEC-SCEEEEETTT--T--EEEETT-
T ss_pred ccC-----------------------------HHHHHHHHHHHHHHCCC----EEEE-eEEEEEEcCC--C--EEEECC-
Confidence 000 11122223445567899 9874 6899997653 3 456654
Q ss_pred cCCceEEEEcCeEEEecCCCc
Q 011458 209 TMNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 209 ~~~~~~~i~ad~VIlAtG~~~ 229 (485)
+..+.+|+||+|||+.+
T Consensus 96 ----g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 96 ----GNTVHYDYLMIATGPKL 112 (437)
T ss_dssp ----SCEEECSEEEECCCCEE
T ss_pred ----CCEEECCEEEECCCCCc
Confidence 56799999999999865
No 298
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=88.78 E-value=0.71 Score=46.25 Aligned_cols=84 Identities=14% Similarity=0.180 Sum_probs=56.8
Q ss_pred HHHHhcCC----ceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCc
Q 011458 137 SWFSDHGV----ELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNL 212 (485)
Q Consensus 137 ~~~~~~Gi----~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 212 (485)
+++.+.|+ .+.........| .....+.+.+.+.+++.|| +++++++|++++. +. |.+.+
T Consensus 191 ~~l~~~g~~~~~~v~~~~~~~~l~--~~~~~~~~~~~~~l~~~gV----~~~~~~~v~~i~~----~~--v~~~~----- 253 (409)
T 3h8l_A 191 GYFKKKGMLDKVHVTVFSPGEYLS--DLSPNSRKAVASIYNQLGI----KLVHNFKIKEIRE----HE--IVDEK----- 253 (409)
T ss_dssp HHHHTTTCTTTEEEEEECSSSSST--TBCHHHHHHHHHHHHHHTC----EEECSCCEEEECS----SE--EEETT-----
T ss_pred HHHHHcCCCCCeEEEEEeCCcccc--ccCHHHHHHHHHHHHHCCC----EEEcCCceEEECC----Ce--EEECC-----
Confidence 45667774 333222222322 2236778889999999999 9999999999853 22 55554
Q ss_pred eEEEEcCeEEEecCCCchhHHHHHHCC
Q 011458 213 VECIEADYLLIASGSSQQGHRLAAQLG 239 (485)
Q Consensus 213 ~~~i~ad~VIlAtG~~~~g~~la~~~G 239 (485)
++++.+|.||+|+|..+. .+++..|
T Consensus 254 g~~~~~D~vi~a~G~~~~--~~l~~~~ 278 (409)
T 3h8l_A 254 GNTIPADITILLPPYTGN--PALKNST 278 (409)
T ss_dssp SCEEECSEEEEECCEECC--HHHHTSC
T ss_pred CCEEeeeEEEECCCCCcc--HHHHhcc
Confidence 578999999999997664 3555553
No 299
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=88.58 E-value=0.38 Score=48.47 Aligned_cols=33 Identities=33% Similarity=0.552 Sum_probs=29.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||||..|+-+|..|++ .|.+|+++|+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 177 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATART--AGVHVSLVETQ 177 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCEEEEEEeC
Confidence 3589999999999999999998 68999999964
No 300
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.55 E-value=0.38 Score=46.64 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=28.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
..|+|||+|..|...|..|++ .|. +|+++|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~--~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ--RGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 589999999999999999998 567 89999965
No 301
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.83 E-value=0.48 Score=43.72 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=28.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
...|+|||||..|...|..|.+ .|++|+|++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~--~GA~VtVvap 62 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQ--EGAAITVVAP 62 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGG--GCCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEECC
Confidence 4589999999999999999998 6889999984
No 302
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.78 E-value=0.39 Score=45.82 Aligned_cols=32 Identities=13% Similarity=0.423 Sum_probs=29.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
...|+|||||..|...|..|.+ .|++|+|++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~--~Ga~VtViap 44 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMP--TGCKLTLVSP 44 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGG--GTCEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHh--CCCEEEEEcC
Confidence 4579999999999999999999 6899999994
No 303
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.71 E-value=0.33 Score=46.63 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|.|||+|..|.+.|..|++ .|.+|++++|+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~--~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQ--SLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--HCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHH--CCCeEEEEEec
Confidence 579999999999999999998 57899999976
No 304
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=87.68 E-value=0.42 Score=49.08 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=29.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-+|..|++ .|.+|+|+|+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~--~G~~Vtlv~~~ 198 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRS--FGSEVTVVALE 198 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcC
Confidence 479999999999999999998 68999999964
No 305
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=87.66 E-value=0.44 Score=48.64 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=28.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
..|+|||.|.+|+++|..|++ .|++|++.|.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~--~G~~v~~~D~ 36 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLA--RGVTPRVMDT 36 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHT--TTCCCEEEES
T ss_pred CEEEEEeecHHHHHHHHHHHh--CCCEEEEEEC
Confidence 469999999999999999988 6899999993
No 306
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=87.62 E-value=0.51 Score=46.31 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=28.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
..+|+|||+|..|...|..|++ .++ +|+|+|.+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~--~g~~~V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCAL--RELADVVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 3589999999999999999998 466 89999954
No 307
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.62 E-value=0.23 Score=45.15 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=29.6
Q ss_pred cCCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHhh
Q 011458 434 KIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSN 476 (485)
Q Consensus 434 k~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~~ 476 (485)
...+++|+||+ + ++|-.++.||.||+.|++.+.++++
T Consensus 292 ~~~~~v~l~GD---a---~~g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 292 DADLGIYVCGD---W---CLSGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp ETTTTEEECCG---G---GTTSSHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCEEEEec---c---cCCcCHHHHHHHHHHHHHHHHHHhh
Confidence 35699999994 3 2333689999999999999998874
No 308
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=87.40 E-value=0.31 Score=42.67 Aligned_cols=45 Identities=16% Similarity=0.116 Sum_probs=32.6
Q ss_pred cccccCCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHhhhhh
Q 011458 430 TMESKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSNDAT 479 (485)
Q Consensus 430 t~esk~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~~~~~ 479 (485)
.|+. .+||+|++|++. +.... ..+.|...|++|+.++....+...
T Consensus 130 ~~~t-~~~~i~a~GD~~---~~~~~-~~~~A~~~g~~aa~~i~~~~~~~~ 174 (180)
T 2ywl_A 130 GGRT-SYPRVYAAGVAR---GKVPG-HAIISAGDGAYVAVHLVSDLRGEP 174 (180)
T ss_dssp TCBC-SSTTEEECGGGG---TCCSC-CHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCc-CCCCEEEeeccc---Ccchh-hHHHHHHhHHHHHHHHHHHhhhcc
Confidence 4554 789999999543 32211 668899999999999987765543
No 309
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.34 E-value=0.5 Score=46.92 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=30.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||.|..|...|..|++ .|++|+++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~--~G~~V~v~dr~ 54 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK--GGHECVVYDLN 54 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 4689999999999999999999 68999999965
No 310
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.27 E-value=0.58 Score=51.02 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~--aG~~V~l~D~~ 344 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALIL--SNYPVILKEVN 344 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT--TTCCEEEECSS
T ss_pred CcEEEEEcCCHhhHHHHHHHHh--CCCEEEEEECC
Confidence 3579999999999999999998 68999999965
No 311
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=87.04 E-value=0.29 Score=49.68 Aligned_cols=35 Identities=29% Similarity=0.623 Sum_probs=31.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+||+|||||++|+++|+.|++.+++.+|+|||+.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 36999999999999999999985457999999965
No 312
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.88 E-value=0.54 Score=45.06 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=28.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||+|..|...|..|++ .|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ--GGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHh--CCCcEEEEECC
Confidence 579999999999999999998 68899999964
No 313
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.85 E-value=0.56 Score=47.89 Aligned_cols=35 Identities=29% Similarity=0.181 Sum_probs=30.8
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+++..|.|||.|-.|+..|..+++ .|++|+.+|-+
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~--~G~~V~g~Did 53 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFAL--LGHRVVGYDVN 53 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHh--CCCcEEEEECC
Confidence 346789999999999999999998 58999999943
No 314
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.82 E-value=0.66 Score=44.24 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||+|..|...|..+++ .|++|+++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~--~G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF--HGFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 479999999999999999998 68999999964
No 315
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=86.69 E-value=0.51 Score=48.85 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=29.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-+|..+++ .|.+|+++|+.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~ 206 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSR--LGVIVKVFGRS 206 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHH--TTCEEEEECCT
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEEC
Confidence 579999999999999999999 68999999964
No 316
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=86.65 E-value=0.15 Score=49.61 Aligned_cols=44 Identities=25% Similarity=0.258 Sum_probs=31.8
Q ss_pred ccCCCCeEEEEeeee-cccCcc-hHHHHHHHHHHHHHHHHHhHHhh
Q 011458 433 SKIHPRLFFAGEVLN-VDGVTG-GFNFQNAWSGGYIAGTSIGKLSN 476 (485)
Q Consensus 433 sk~~~gLy~~GE~lD-v~g~~G-Gynl~~A~~sG~~AG~~a~~~~~ 476 (485)
.+.+||+|+||..+. ++|... |..+..+..||+.|++.+.+++.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 467899999997553 454332 44455677899999999988763
No 317
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.52 E-value=0.68 Score=44.77 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=30.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||.|..|...|..|++ .|++|++++++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~--~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLK--NGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 4689999999999999999998 68999999965
No 318
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=86.49 E-value=0.62 Score=45.58 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|.|||+|..|...|..|++ .|.+|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~--~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLAL--AGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHH--TTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCEEEEEECh
Confidence 579999999999999999999 68899999963
No 319
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=86.45 E-value=0.57 Score=47.56 Aligned_cols=33 Identities=30% Similarity=0.543 Sum_probs=29.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||||..|+-+|..|++ .|.+|+++|+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~ 181 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIK--ANMHVTLLDTA 181 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCEEEEEEeC
Confidence 3579999999999999999998 68999999964
No 320
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=86.30 E-value=0.68 Score=50.52 Aligned_cols=71 Identities=17% Similarity=0.153 Sum_probs=44.9
Q ss_pred HHHHHhhhhhhcccceeccccccccccccc--C-CCCCCCCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 12 FAVSLDTASTRSNCKYLLLTSKKRKFTTAA--I-PLTHTSSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
|+.++.+++-|..+..+...++..+.+... . .......-..|.|||+|..|...|..++. .|++|+|+|.+
T Consensus 275 F~~l~~s~~~k~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGaG~MG~gIA~~~a~--aG~~V~l~D~~ 348 (742)
T 3zwc_A 275 FMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFAR--VGISVVAVESD 348 (742)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSS
T ss_pred HHHhcCCHHHHHHHHHHHHHhhcccccccccccccccCcccccEEEEEcccHHHHHHHHHHHh--CCCchhcccch
Confidence 444555566555555444443333322211 1 11122234689999999999999999998 79999999954
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=86.08 E-value=0.65 Score=46.75 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=29.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||+|.+|+.+|..|.. .|.+|+++|+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR--LGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 3589999999999999998887 68899999954
No 322
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=86.02 E-value=0.66 Score=43.88 Aligned_cols=31 Identities=19% Similarity=0.035 Sum_probs=28.3
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+|.|||+|..|...|..|++ .|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK--QGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred eEEEECcCHHHHHHHHHHHh--CCCCEEEEEcC
Confidence 58999999999999999998 68899999965
No 323
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=85.76 E-value=0.65 Score=46.71 Aligned_cols=33 Identities=39% Similarity=0.573 Sum_probs=29.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|..|+-+|..+++ .|.+|+++|+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtvv~~~ 175 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARK--LGLSVTILEAG 175 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecC
Confidence 3579999999999999999998 68999999954
No 324
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=85.58 E-value=0.62 Score=46.58 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=29.5
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
....|+|+|+|.+|+.+|-.+.. .|. +|+++|+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~--~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLA--AGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH--HTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHH--cCCCeEEEEECC
Confidence 35689999999999999998887 466 99999965
No 325
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.54 E-value=0.42 Score=49.16 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=29.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+.|+|+|+|-.|...|..|.+ .|++|+|+|++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~--~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVG--ENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCS--TTEEEEEEESC
T ss_pred cCEEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 4579999999999999999988 68999999965
No 326
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=85.53 E-value=0.67 Score=47.89 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=30.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+.|.|||.|..|+..|..|++ .|++|+++|++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~--~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD--IGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 4689999999999999999999 68999999964
No 327
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=85.46 E-value=0.71 Score=46.98 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=28.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||.|..|+..|..|++ |++|+++|++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~ 67 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ---NHEVVALDIV 67 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TSEEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHc---CCeEEEEecC
Confidence 4589999999999999999986 6899999964
No 328
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.24 E-value=0.77 Score=44.77 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=29.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~--~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 3579999999999999999998 68999999964
No 329
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.22 E-value=0.68 Score=47.95 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=29.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-.|..|++ .|.+|+|+|+.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~ 208 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKR--LGIDSYIFARG 208 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHT--TTCEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHH--cCCeEEEEecC
Confidence 479999999999999999998 68999999964
No 330
>3r8n_M 30S ribosomal protein S13; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_M* 3j18_M 3oaq_M 3ofa_M 3ofx_M 3ofo_M 3r8o_M 4a2i_M 4gd1_M 4gd2_M 3i1m_M 1vs7_M* 3e1a_F 3e1c_F 1vs5_M 3i1o_M 3i1q_M 3i1s_M 3i1z_M 3i21_M ...
Probab=85.19 E-value=0.9 Score=37.09 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=36.8
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhccCe
Q 011458 362 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKHCT 402 (485)
Q Consensus 362 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~ 402 (485)
.+-.+++..+|+.+++++++++.+|+++++..|.+.+.+|.
T Consensus 23 GIG~~~A~~I~~~~gid~~~r~~~Lt~~ei~~l~~~i~~~~ 63 (114)
T 3r8n_M 23 GVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFV 63 (114)
T ss_dssp TCCHHHHHHHHHHTTCCTTCCSTTCCHHHHHHHHHHHSSSC
T ss_pred CcCHHHHHHHHHHcCcCcccCcccCCHHHHHHHHHHHHHhc
Confidence 46688899999999999999999999999999999886654
No 331
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=84.94 E-value=0.84 Score=44.21 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=28.4
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+|+|||+|..|...|..|++.+.+.+|+++|++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 699999999999999999984236899999964
No 332
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=84.94 E-value=0.75 Score=47.12 Aligned_cols=32 Identities=28% Similarity=0.214 Sum_probs=29.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
++|.|||.|..|+..|..|++ .|++|+++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~--~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE--LGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHh--cCCEEEEEECC
Confidence 579999999999999999999 68999999965
No 333
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.93 E-value=0.99 Score=46.40 Aligned_cols=33 Identities=27% Similarity=0.221 Sum_probs=29.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~ 69 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR--VGISVVAVESD 69 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 3579999999999999999998 68999999964
No 334
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=84.73 E-value=0.72 Score=47.31 Aligned_cols=32 Identities=9% Similarity=-0.033 Sum_probs=28.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||+|.+|+-.|..|++ .+.+|+++++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~--~g~~V~li~~~ 229 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYK--YGAKKLISCYR 229 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHH--TTCSEEEEECS
T ss_pred CEEEEEcCCCCHHHHHHHHHH--hCCeEEEEEEC
Confidence 579999999999999999999 68899999953
No 335
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=84.71 E-value=0.69 Score=47.37 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=29.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|.+|+++|..|++ .|++|++.|..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~ 41 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGK 41 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 3579999999999999999998 78999999953
No 336
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.70 E-value=0.9 Score=41.19 Aligned_cols=33 Identities=12% Similarity=0.055 Sum_probs=29.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..|++ .|.+|++++++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~--~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEI--AGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCEEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 3579999999999999999998 67899999965
No 337
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=84.68 E-value=0.88 Score=44.50 Aligned_cols=32 Identities=19% Similarity=0.290 Sum_probs=28.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
..|.|||+|..|...|..+++ .|+ +|+|+|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~--~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ--KDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 479999999999999999998 566 89999954
No 338
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=84.33 E-value=0.83 Score=44.36 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=28.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
..|.|||+|..|...|..+++ .|+ +|+++|++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~--~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGK--DNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 579999999999999999998 566 89999964
No 339
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.21 E-value=0.72 Score=43.20 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=29.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (485)
..|+|||+|..|..+|..|++ .|. +++|+|++.+
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~--~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLAS--AGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHH--cCCCeEEEEcCCCc
Confidence 579999999999999999999 565 8999997643
No 340
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=84.14 E-value=0.74 Score=45.95 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=28.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||+|..|+.+|..|.. .|.+|+++|+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKR--LGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH--HTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 3589999999999999999887 57899999954
No 341
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=84.09 E-value=3.3 Score=44.49 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=50.5
Q ss_pred eeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeee-cCCceEEEEcCeEEEecCCCchhH
Q 011458 154 VFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKR-TMNLVECIEADYLLIASGSSQQGH 232 (485)
Q Consensus 154 ~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~i~ad~VIlAtG~~~~g~ 232 (485)
.+........+.++|.+ ++ +|+++++|++|..++ +.+.|++.+. ..+.+.+++||+||+|+. .
T Consensus 393 ~~~~~gG~~~l~~~La~-----~l----~I~l~~~V~~I~~~~--~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP-----~ 456 (662)
T 2z3y_A 393 HLTVRNGYSCVPVALAE-----GL----DIKLNTAVRQVRYTA--SGCEVIAVNTRSTSQTFIYKCDAVLCTLP-----L 456 (662)
T ss_dssp CEEETTCTTHHHHHHTT-----TC----EEETTEEEEEEEEET--TEEEEEEEESSCTTCEEEEEESEEEECCC-----H
T ss_pred eeeecCcHHHHHHHHHh-----cC----ceecCCeEEEEEECC--CcEEEEEeecccCCCCeEEEeCEEEECCC-----H
Confidence 34334445566666543 67 999999999999875 5677876531 112246899999999987 3
Q ss_pred HHHHHCC--CceecCCCc
Q 011458 233 RLAAQLG--HSIVDPVPS 248 (485)
Q Consensus 233 ~la~~~G--~~i~~~~p~ 248 (485)
.+++.+. +...|+.|.
T Consensus 457 ~vL~~l~~~i~f~P~LP~ 474 (662)
T 2z3y_A 457 GVLKQQPPAVQFVPPLPE 474 (662)
T ss_dssp HHHHCSSCSSEEESCCCH
T ss_pred HHHhcccCceEEcCCCCH
Confidence 4555432 344554443
No 342
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.07 E-value=0.88 Score=43.95 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=27.7
Q ss_pred cEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
+|+|||+|..|...|..++. .|+ +|+++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~--~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL--RGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 69999999999999999998 566 89999964
No 343
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=83.90 E-value=0.84 Score=47.85 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-+|..|++ .|.+|+++|+.
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~ 183 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHH--LGIKTTLLELA 183 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHh--cCCcEEEEEcC
Confidence 479999999999999999998 68999999954
No 344
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=83.72 E-value=0.83 Score=45.56 Aligned_cols=34 Identities=32% Similarity=0.301 Sum_probs=29.3
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
....|+|+|+|.+|..+|..|... |. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~--G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL--GVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECC
Confidence 356899999999999999999884 55 89999965
No 345
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=83.60 E-value=0.79 Score=48.17 Aligned_cols=33 Identities=12% Similarity=0.058 Sum_probs=29.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
.+++|||||..|+-.|..+++ -|.+|+|++++.
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~--lG~~VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNS--LGYDVTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--HTCCEEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHh--cCCeEEEecccc
Confidence 479999999999999999998 589999999653
No 346
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=83.56 E-value=1 Score=45.52 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=29.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||.|..|...|..|.+ .|.+|++||++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 3469999999999999999998 68999999965
No 347
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.46 E-value=0.98 Score=44.07 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=29.8
Q ss_pred CCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 49 SEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 49 ~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+..+|.|||+|..|...|..|++ .|++|+++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~--~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHE--NGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 35689999999999999999998 68999999964
No 348
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.38 E-value=0.99 Score=44.17 Aligned_cols=32 Identities=19% Similarity=0.098 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|.|||+|..|...|..|++ .|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~--~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL--KGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 579999999999999999998 68899999964
No 349
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=83.31 E-value=1.1 Score=46.42 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=30.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|+..|..|++.++|++|+++|++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 35899999999999999999985447899999954
No 350
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.22 E-value=0.57 Score=39.54 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=27.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|+|||+|..|...|..|++ .|.+|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~--~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY--PQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT--TTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 479999999999999988887 57788888864
No 351
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=83.18 E-value=0.98 Score=46.60 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCC-CC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAP-KL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~-g~-~V~llE~~ 84 (485)
..+|.|||+|..|+..|..|++ . |+ +|+++|++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~--~~G~~~V~~~D~~ 52 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFAD--APCFEKVLGFQRN 52 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH--STTCCEEEEECCC
T ss_pred CCEEEEECcCHHHHHHHHHHHH--hCCCCeEEEEECC
Confidence 3589999999999999999999 6 89 99999955
No 352
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=83.10 E-value=1.1 Score=44.04 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=28.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|+|||||..|.++|+.+.+ .|++|+++|.+
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~--~G~~vv~vd~~ 33 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKK--AGMKVVLVDKN 33 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 579999999999999998888 69999999943
No 353
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=82.94 E-value=0.97 Score=43.87 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=28.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||+|..|.+.|..|++ .|.+|+++ +.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~--~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLAR--AGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHH--TTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHH--CCCeEEEE-Ec
Confidence 4589999999999999999998 68899999 54
No 354
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=82.92 E-value=1.1 Score=45.05 Aligned_cols=33 Identities=30% Similarity=0.375 Sum_probs=29.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|..|+-+|..+++ .|.+|+++|+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtvv~~~ 184 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK--FGVNVTLLEAL 184 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--cCCeEEEEecC
Confidence 4579999999999999999998 68999999954
No 355
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=82.82 E-value=0.62 Score=44.79 Aligned_cols=31 Identities=26% Similarity=0.253 Sum_probs=27.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCC-----C-CcEEEEeC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAP-----K-LNVVIIEK 83 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~-----g-~~V~llE~ 83 (485)
.+|.|||+|..|...|..|++ . | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~--~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLAL--RAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--HHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHh--CccccCCCCCEEEEEc
Confidence 479999999999999999998 5 7 89999986
No 356
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=82.63 E-value=1.1 Score=44.46 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=28.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|+|+|+|.+|..++..|+. .|.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~--~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVG--LGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 589999999999999999988 57799999864
No 357
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=82.49 E-value=1.1 Score=44.91 Aligned_cols=32 Identities=31% Similarity=0.429 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||+|..|+-+|..+++ .+.+|+++|+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~--~g~~Vtvv~~~ 174 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARA--KGLEVDVVELA 174 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 479999999999999999998 68999999954
No 358
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=82.41 E-value=0.83 Score=47.11 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=28.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|+|||||..|+-.|..+++ .|.+|+++|+.
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 230 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWAR--LGAKVTVVEFL 230 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--HTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCEEEEEecc
Confidence 479999999999999999998 57899999954
No 359
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=82.28 E-value=0.8 Score=47.07 Aligned_cols=37 Identities=30% Similarity=0.467 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC-CCCCc
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK-GKPLS 88 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~-~~~g~ 88 (485)
+++|||||||++||+||+.|++ .|++|+|||+ +.+|+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~--~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQA--AGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH--TTCCEEEECCC-----
T ss_pred CCCEEEECCcHHHHHHHHHHHH--CCCcEEEEccCCCCCC
Confidence 3689999999999999999999 7899999995 57775
No 360
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=82.21 E-value=1.5 Score=42.14 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=29.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..|++ .|.+|++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~--~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLK--MGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCeEEEEcccHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 3579999999999999999988 67899999964
No 361
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=82.16 E-value=1.4 Score=41.01 Aligned_cols=33 Identities=21% Similarity=0.124 Sum_probs=29.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|...|..|++ .|++|++.+++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~--~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALAD--LGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4689999999999999999998 68999999965
No 362
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=82.01 E-value=1.7 Score=44.16 Aligned_cols=112 Identities=18% Similarity=0.230 Sum_probs=70.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCC-CCcceeecCCCceeccCCCCcchHHHhhccCCCCccchhhHhhc
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGK-PLSKVKISGGGRCNVTNGHCADKMILAGHYPRGHKEFRGSFFSL 129 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~-~g~k~~~sG~g~~n~tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (485)
+||+|||||++|++||.+|++.+++.+|+|||+.. .+- ..|.+. .|... .. .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~-------~~~~~~------------~~~~~--~~-----~- 55 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGY-------LSGGLS------------AYFNH--TI-----N- 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSS-------CCC-------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcc-------cCccch------------hhhcC--CC-----C-
Confidence 69999999999999999999965589999999653 330 011000 00000 00 0
Q ss_pred CChHHHHHHHHhcCCceeecCCCeeeecCCChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeec
Q 011458 130 HGPMDTMSWFSDHGVELKTEDDGRVFPVSDSSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRT 209 (485)
Q Consensus 130 ~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~ 209 (485)
... ...+ .+.+.+.+.++ +++.+++|+++..+. +.+.+...
T Consensus 56 -~~~------------------~~~~-----------~~~~~~~~~gi----~~~~~~~V~~id~~~--~~v~v~~~--- 96 (452)
T 3oc4_A 56 -ELH------------------EARY-----------ITEEELRRQKI----QLLLNREVVAMDVEN--QLIAWTRK--- 96 (452)
T ss_dssp ------------------------CC-----------CCHHHHHHTTE----EEECSCEEEEEETTT--TEEEEEET---
T ss_pred -CHH------------------Hhhc-----------CCHHHHHHCCC----EEEECCEEEEEECCC--CEEEEEec---
Confidence 000 0000 01233466789 999999999998764 56666421
Q ss_pred CCceEEEEcCeEEEecCCCc
Q 011458 210 MNLVECIEADYLLIASGSSQ 229 (485)
Q Consensus 210 ~~~~~~i~ad~VIlAtG~~~ 229 (485)
+.+..+.+|.+|+|||+.+
T Consensus 97 -~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 97 -EEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp -TEEEEEECSEEEECCCCCB
T ss_pred -CceEEEEcCEEEECCCccc
Confidence 1257899999999999865
No 363
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=81.99 E-value=2.3 Score=42.93 Aligned_cols=68 Identities=9% Similarity=0.077 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCCc
Q 011458 162 SSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGHS 241 (485)
Q Consensus 162 ~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~~ 241 (485)
....+.+.+.+++.|| ++++++.|++++. +...+.. .++.++++.+|.||+|+|..+. .+....+..
T Consensus 200 ~~~~~~l~~~l~~~GV----~~~~~~~v~~v~~----~~~~~~~---~~g~~~~i~~d~vi~~~G~~~~--~~~~~~~~~ 266 (430)
T 3hyw_A 200 GASKRLVEDLFAERNI----DWIANVAVKAIEP----DKVIYED---LNGNTHEVPAKFTMFMPSFQGP--EVVASAGDK 266 (430)
T ss_dssp TTHHHHHHHHHHHTTC----EEECSCEEEEECS----SEEEEEC---TTSCEEEEECSEEEEECEEECC--HHHHTTCTT
T ss_pred HHHHHHHHHHHHhCCe----EEEeCceEEEEeC----CceEEEe---eCCCceEeecceEEEeccCCCc--hHHHhcccc
Confidence 3455677788899999 9999999999853 3333332 2234578999999999997653 455555544
Q ss_pred e
Q 011458 242 I 242 (485)
Q Consensus 242 i 242 (485)
+
T Consensus 267 l 267 (430)
T 3hyw_A 267 V 267 (430)
T ss_dssp T
T ss_pred c
Confidence 3
No 364
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=81.94 E-value=0.94 Score=43.83 Aligned_cols=33 Identities=15% Similarity=0.076 Sum_probs=29.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
...|.|||.|..|...|..|++ .|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~--~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQ--AGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--HSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHH--CCCCeEEEEcCC
Confidence 4689999999999999999998 578 99999974
No 365
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=81.93 E-value=1.4 Score=39.97 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=28.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..|++ .|++|++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~--~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVG--SGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4579999999999999999988 57899999964
No 366
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=81.90 E-value=1.3 Score=44.71 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=28.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||+|.+|+.+|..|.. .|.+|+++|+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANS--LGAIVRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 3579999999999999998887 57899999954
No 367
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=81.75 E-value=1.4 Score=42.84 Aligned_cols=32 Identities=28% Similarity=0.330 Sum_probs=28.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
.+|.|||+|..|...|..++. .+. +|+|+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~--~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ--KNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCC
Confidence 579999999999999999998 566 89999954
No 368
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=81.50 E-value=0.53 Score=51.23 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=29.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|...|..+++ .|++|+++|++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~--aG~~V~l~D~~ 346 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSAS--KGTPILMKDIN 346 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCEEEEECCChhhHHHHHHHHh--CCCEEEEEECC
Confidence 3479999999999999999998 68999999964
No 369
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=81.45 E-value=0.99 Score=44.58 Aligned_cols=31 Identities=26% Similarity=0.202 Sum_probs=28.4
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+|.|||+|..|...|..|++ .|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~--~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK--KCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 79999999999999999998 68899999964
No 370
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=81.30 E-value=1.1 Score=43.49 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=29.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|...|..|++ .|++|++++++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCE--AGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHh--CCCeEEEEcCC
Confidence 4589999999999999999998 68999999965
No 371
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=81.05 E-value=1.4 Score=42.52 Aligned_cols=32 Identities=19% Similarity=0.401 Sum_probs=27.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.++|.|||+|..|.+.|..|+ . |.+|++++|+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-c--CCceEEEECC
Confidence 357999999999999999998 3 6899999975
No 372
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=81.04 E-value=1.5 Score=42.73 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=28.0
Q ss_pred CCcEEEECcchHHHH-HHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVY-GAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~-aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|.+|++ +|..|.+ .|++|++.|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~--~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKE--AGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CcEEEEEEECHHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 357999999999997 6777777 68999999953
No 373
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=80.87 E-value=1.4 Score=43.93 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=28.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||+|.+|+.+|..|.. .|.+|+++|+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKR--LGAVVMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4589999999999999998887 57889999954
No 374
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=80.85 E-value=1.6 Score=42.68 Aligned_cols=33 Identities=24% Similarity=0.331 Sum_probs=28.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
..+|.|||+|..|.+.|..|+. .+. +|+|+|.+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~--~~~~~v~L~Di~ 40 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGL--KELGDVVLFDIA 40 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCC
Confidence 4589999999999999999998 466 99999954
No 375
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.79 E-value=1.2 Score=45.39 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=28.3
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.|.|||+|..|+..|..|++ .|++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~--~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA--RGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHH--CCCEEEEEECC
Confidence 68999999999999999998 68999999964
No 376
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=80.57 E-value=1.5 Score=45.07 Aligned_cols=32 Identities=22% Similarity=0.178 Sum_probs=29.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+++|||||..|+-.|..+++ .|.+|+++++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~ 219 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKG--LGYEPTVMVRS 219 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHH--cCCEEEEEeCC
Confidence 479999999999999999998 68999999964
No 377
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=80.55 E-value=1.4 Score=45.31 Aligned_cols=34 Identities=15% Similarity=0.353 Sum_probs=29.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||.|..|+..|..|++.++|++|+++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5799999999999999999984337899999964
No 378
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=80.48 E-value=1.1 Score=43.26 Aligned_cols=33 Identities=21% Similarity=0.471 Sum_probs=28.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
...|.|||+|..|...|+.++. .+. +|+|+|.+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~--~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISA--KGIADRLVLLDLS 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--cCCCCEEEEEcCC
Confidence 3589999999999999999988 456 89999943
No 379
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=80.44 E-value=1.5 Score=42.02 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||.|..|...|..|++ .|++|++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR--AGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCeEEEEECC
Confidence 3579999999999999999998 68999999965
No 380
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=80.43 E-value=1.4 Score=42.63 Aligned_cols=32 Identities=19% Similarity=0.366 Sum_probs=27.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
.+|.|||+|..|...|..++. .+. +|+++|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~--~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA--KELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCCeEEEEeCC
Confidence 479999999999999999998 454 89999954
No 381
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=80.18 E-value=2.3 Score=40.77 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=29.1
Q ss_pred CCcEEEEC-cchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVG-GGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIG-gG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.||| .|..|.+.|..|++ .|++|++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~--~G~~V~~~~~~ 54 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRA--SGYPISILDRE 54 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHT--TTCCEEEECTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 34799999 99999999999998 67899999964
No 382
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=80.05 E-value=1.6 Score=44.65 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=30.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...+.|||.|..|+..|..|++ .|++|+++|++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~--~G~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSD--FGHEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4579999999999999999999 68999999965
No 383
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=80.03 E-value=1.8 Score=41.90 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=29.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
...|.|||.|..|.+.|..|++ .|. +|+++|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~--~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCCCEEEEEECC
Confidence 3589999999999999999998 577 89999965
No 384
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=79.93 E-value=1.7 Score=43.10 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=28.5
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|+|+|+|..|..+|..|+. .|.+|+++|+.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~--~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALG--MGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 579999999999999999988 68899999964
No 385
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=79.72 E-value=1.7 Score=41.00 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=27.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
...++|+|+|.+|..+|..|++ .|.+|++++|
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~--~G~~V~v~~R 150 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLS--LDCAVTITNR 150 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECS
T ss_pred CCEEEEECCcHHHHHHHHHHHH--cCCEEEEEEC
Confidence 3579999999999999999998 5678888775
No 386
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=79.58 E-value=1.2 Score=43.05 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=27.6
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
.|.|||+|..|...|..|++ .|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~--~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVD--NGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHH--HCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHh--CCCeEEEEEc
Confidence 58999999999999999998 5789999997
No 387
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=79.54 E-value=1.7 Score=41.28 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||.|..|...|..|++ .|++|++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK--AGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHH--CCCeEEEEcCC
Confidence 469999999999999999998 68999999965
No 388
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=79.40 E-value=1.5 Score=41.92 Aligned_cols=33 Identities=12% Similarity=0.075 Sum_probs=29.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+..|.|||.|..|...|..|++ .|++|++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~--~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLK--AGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEEeecHHHHHHHHHHHh--CCCeEEEEcCC
Confidence 3579999999999999999998 68999999965
No 389
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=79.31 E-value=1.5 Score=45.67 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=29.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+++|||||..|+-.|..+++ .|.+|+++|+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~ 246 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA--TGRRTVMLVRT 246 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEec
Confidence 689999999999999999998 68999999964
No 390
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=79.29 E-value=1.3 Score=42.99 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=27.5
Q ss_pred cEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
.|.|||+|..|...|..|++ .|. +|+++|++
T Consensus 2 kI~VIGaG~~G~~la~~l~~--~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLM--KGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCC
Confidence 68999999999999999998 466 89999964
No 391
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=79.29 E-value=1.6 Score=41.76 Aligned_cols=33 Identities=21% Similarity=0.093 Sum_probs=29.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||.|..|...|..|++ .|++|+++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~--~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE--WPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT--STTCEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 3579999999999999999998 68999999965
No 392
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=78.96 E-value=1.7 Score=42.30 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=27.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
.+|+|||+|..|...|+.++. .+. +|+++|.+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~--~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL--RQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 589999999999999999998 455 89999943
No 393
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=78.76 E-value=1.7 Score=42.09 Aligned_cols=33 Identities=9% Similarity=0.004 Sum_probs=28.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCC----CcEEEEeCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPK----LNVVIIEKGK 85 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g----~~V~llE~~~ 85 (485)
+.|.|||+|..|...|..|++ .| .+|++++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~--~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTA--AGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHH--TTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCCCcceEEEECCCc
Confidence 579999999999999999988 56 7899999653
No 394
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=78.53 E-value=2.1 Score=38.33 Aligned_cols=31 Identities=23% Similarity=0.258 Sum_probs=27.7
Q ss_pred cEEEEC-cchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVG-GGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIG-gG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.|.||| +|..|...|..|++ .|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~--~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT--LGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT--TTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 589999 99999999999998 67899999864
No 395
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=78.35 E-value=1.5 Score=42.30 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=27.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCC--CcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPK--LNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g--~~V~llE~~ 84 (485)
..|.|||+|..|...|..|++ .| .+|+++|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~--~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA--QGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEcCC
Confidence 469999999999999999998 45 689999964
No 396
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=78.32 E-value=2.8 Score=40.27 Aligned_cols=33 Identities=27% Similarity=0.182 Sum_probs=29.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||.|..|...|..|++ .|++|++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~--~G~~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLK--QGKRVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4579999999999999999998 68999999965
No 397
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=78.32 E-value=2 Score=44.42 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=29.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||+|..|...|..+++ .|++|+++|++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~--aG~~V~l~D~~ 37 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAAS--HGHQVLLYDIS 37 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCeEEEEECC
Confidence 479999999999999999998 68999999965
No 398
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=78.12 E-value=2.1 Score=41.99 Aligned_cols=34 Identities=15% Similarity=0.388 Sum_probs=29.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGK 85 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~ 85 (485)
...|+|||+|..|..+|..|++ .|. +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~--aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cCCCEEEEecCCE
Confidence 4689999999999999999999 454 799999654
No 399
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=78.10 E-value=1.3 Score=44.47 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=27.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEe
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE 82 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE 82 (485)
++|.|||+|..|...|..|++. .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~-~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASR-DGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-TTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhC-CCCEEEEEe
Confidence 4799999999999999999872 378999999
No 400
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=77.97 E-value=1.7 Score=41.30 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=28.7
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||+|..|...|..|++ .|++|++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK--AGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 579999999999999999998 57899999964
No 401
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=77.81 E-value=1.7 Score=41.79 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKGKP 86 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~~~ 86 (485)
...|+|||+|..|..+|..|++.+- -+++|+|.+.+
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGV-G~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGI-GKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCC-CEEEEECCCcc
Confidence 4689999999999999999999432 38999997644
No 402
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=77.68 E-value=2.2 Score=42.48 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=28.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||+|..|..+|..|+. .|.+|+++|+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~--~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANG--MGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 3579999999999999998887 57899999854
No 403
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=77.60 E-value=2 Score=41.63 Aligned_cols=33 Identities=12% Similarity=-0.016 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCC-CcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g-~~V~llE~~ 84 (485)
...|.|||.|..|...|..|++ .| ++|++++++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~--~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGG--RNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCSEEEEECGG
T ss_pred CCeEEEECccHHHHHHHHHHHH--cCCCeEEEEeCC
Confidence 4679999999999999999998 68 899999965
No 404
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=77.59 E-value=2 Score=41.69 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=28.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
..|.|||+|..|...|+.++. .+. +|+++|.+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~--~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ--KELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCeEEEEecc
Confidence 479999999999999999998 567 99999964
No 405
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=77.42 E-value=1.5 Score=39.93 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=28.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEE-EeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVI-IEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~l-lE~~ 84 (485)
+..|.|||+|..|...|..|++ .|.+|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQIPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TTCCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCC
Confidence 4689999999999999999998 6788888 6654
No 406
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.32 E-value=2.4 Score=38.60 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=29.4
Q ss_pred CCcEEEECc-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+.|+|.|| |..|...|..|++ .|++|+++.|+
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~--~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKN--KGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCeEEEECCCChHHHHHHHHHHh--CCCeEEEEECC
Confidence 457999998 9999999999998 68999999975
No 407
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=77.24 E-value=2.4 Score=43.23 Aligned_cols=35 Identities=31% Similarity=0.458 Sum_probs=31.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+||+|||||++|++||..|++.+++.+|+|||+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~ 37 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA 37 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECC
Confidence 36999999999999999999996558999999965
No 408
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=77.00 E-value=2.2 Score=39.94 Aligned_cols=35 Identities=14% Similarity=0.331 Sum_probs=29.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (485)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~--~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAG--AGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHH--TTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHH--cCCCeEEEEeCCCc
Confidence 3589999999999999999999 554 7899996643
No 409
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=76.94 E-value=1.7 Score=41.34 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=28.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|.|||.|..|...|..|++ .|++|++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~--~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR--AGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH--HTCCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHH--CCCeEEEEcCC
Confidence 369999999999999999998 57999999965
No 410
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=76.76 E-value=2.5 Score=41.32 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=28.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
...|.|||+|..|...|+.++. .+. +|+++|.+
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~--~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLM--KDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHH--HCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEECC
Confidence 4689999999999999999988 354 89999953
No 411
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=76.69 E-value=2.5 Score=40.62 Aligned_cols=32 Identities=9% Similarity=0.159 Sum_probs=27.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEK 83 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~ 83 (485)
...|+|||+|.+|..+|..|++ .|. +|+|+.|
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~--~G~~~V~v~nR 173 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLS--TAAERIDMANR 173 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TTCSEEEEECS
T ss_pred CCEEEEECcHHHHHHHHHHHHH--CCCCEEEEEeC
Confidence 3579999999999999999998 566 7888775
No 412
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=76.56 E-value=2 Score=44.07 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=29.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||||..|...|..|.+ .|++|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~--~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLE--AGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CcCEEEEEcCC
Confidence 3579999999999999999999 68999999953
No 413
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=76.36 E-value=2.2 Score=44.05 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=29.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||.|..|...|..|++ .|++|+++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~--~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIES--RGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHT--TTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 3479999999999999999998 68999999965
No 414
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=76.34 E-value=0.86 Score=45.72 Aligned_cols=62 Identities=16% Similarity=0.078 Sum_probs=27.8
Q ss_pred hcccceecccccccccccccCCCCCCCCCCcEEEECcchHHHHHHHHHhccCCC------CcEEEEeCC
Q 011458 22 RSNCKYLLLTSKKRKFTTAAIPLTHTSSEELLVVVGGGAAGVYGAIRAKTVAPK------LNVVIIEKG 84 (485)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dViIIGgG~aGl~aA~~la~~~~g------~~V~llE~~ 84 (485)
|.++.-.++.+.++ .++.+.+....++..+|.|||+|.-|.+.|..|++.+.+ .+|.+.-+.
T Consensus 7 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~ 74 (391)
T 4fgw_A 7 RLNLTSGHLNAGRK-RSSSSVSLKAAEKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFE 74 (391)
T ss_dssp ---------------------------CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCC
T ss_pred HHHHHhhhhccccc-cccccccccccCCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcc
Confidence 44444444444422 223333333444556899999999999999999984211 248887743
No 415
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=76.18 E-value=2.7 Score=41.03 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=28.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
...|.|||+|..|...|+.++. .+. +++|+|.+
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~--~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILM--KDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCceEEEEeCC
Confidence 4689999999999999999988 454 89999954
No 416
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=76.08 E-value=2.6 Score=40.97 Aligned_cols=32 Identities=28% Similarity=0.347 Sum_probs=27.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
..|.|||+|..|.+.|..++. .+. +|+|+|.+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~--~~~~~v~l~Di~ 38 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALI--KQLGDVVLFDIA 38 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 579999999999999999998 455 99999954
No 417
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=76.08 E-value=2.4 Score=39.84 Aligned_cols=31 Identities=19% Similarity=0.114 Sum_probs=27.7
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.|.|||+|..|...|..|++ .|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR--RGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHH--CCCEEEEEECC
Confidence 58999999999999999988 57899999964
No 418
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=76.03 E-value=2.2 Score=40.96 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=27.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|..|+-+|..|++ .+ +|+++.+.
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~--~~-~v~~v~~~ 194 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVST--VA-ETTWITQH 194 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TS-EEEEECSS
T ss_pred CCEEEEECCCcCHHHHHHHHHh--hC-CEEEEECC
Confidence 3589999999999999999998 45 69999854
No 419
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=75.96 E-value=1.9 Score=41.43 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=27.1
Q ss_pred cEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
+|.|||+|..|.+.|+.|++ .+. +|+|+|.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~--~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLL--NLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCeEEEEECC
Confidence 69999999999999999998 355 89999954
No 420
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=75.90 E-value=2.5 Score=40.05 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=29.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...++|||+|.+|.++|..|++ .|.+|+|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~--~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKK--QGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4689999999999999999998 56889999864
No 421
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=75.74 E-value=2.2 Score=43.78 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=29.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+++|||+|..|+-.|..+++ .|.+|+++++.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~--~g~~Vtli~~~ 223 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHG--LGVKTTLLHRG 223 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHH--cCCeEEEEECC
Confidence 589999999999999999998 68899999964
No 422
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=75.59 E-value=2 Score=40.57 Aligned_cols=33 Identities=15% Similarity=0.285 Sum_probs=28.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...++|+|+|.+|..+|..|++ .|.+|+|+.|.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~--~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQ--AQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCEEEEEECC
Confidence 3579999999999999999998 56888888763
No 423
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=75.26 E-value=2.3 Score=43.30 Aligned_cols=33 Identities=24% Similarity=0.290 Sum_probs=29.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+++|||||..|+-.|..+++ .|.+|+++++.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vt~v~~~ 202 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHG--LGVKTTLIYRG 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcC
Confidence 3579999999999999999998 68899999964
No 424
>3u5c_S 40S ribosomal protein S18-A, 40S ribosomal protein S17-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_M 3o30_L 3o2z_L 3u5g_S 1s1h_M 3jyv_M* 2zkq_m
Probab=75.08 E-value=3.3 Score=35.25 Aligned_cols=39 Identities=8% Similarity=0.200 Sum_probs=35.7
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011458 362 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 400 (485)
Q Consensus 362 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 400 (485)
.+-.+++..+|+.++|++++++.+|+++++..|...+.+
T Consensus 37 GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~l~~~i~~ 75 (146)
T 3u5c_S 37 GVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 75 (146)
T ss_dssp TCCHHHHHHHHHHHTCCTTSCSSSCCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHcCCCCCceeccCCHHHHHHHHHHHHh
Confidence 466889999999999999999999999999999988864
No 425
>3j20_O 30S ribosomal protein S13P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=74.96 E-value=3.2 Score=35.43 Aligned_cols=39 Identities=13% Similarity=0.109 Sum_probs=35.3
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011458 362 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 400 (485)
Q Consensus 362 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 400 (485)
.+-.+++..+|+.++|++++++.+|+++++..|...+.+
T Consensus 30 GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~i~~~i~~ 68 (148)
T 3j20_O 30 GIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILAD 68 (148)
T ss_dssp TCCHHHHHHHHHHHTCCSSSCTTBCCHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHhCCCCCceeccCCHHHHHHHHHHHhc
Confidence 466888999999999999999999999999999988865
No 426
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=74.70 E-value=6.1 Score=38.42 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=28.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|...|..++. .|.+|+++++.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~--~G~~V~~~d~~ 187 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKP--FGVQRFLYTGR 187 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG--GTCCEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHH--CCCEEEEECCC
Confidence 4579999999999999999987 57899999954
No 427
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=74.68 E-value=3.4 Score=40.00 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=28.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||+|..|.+.|+.++..+...+|+++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 35899999999999999999874322379999954
No 428
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=74.67 E-value=4 Score=39.20 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=29.4
Q ss_pred CCcEEEECc-chHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 50 EELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 50 ~~dViIIGg-G~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
.+.|+|.|| |..|...+..|++ .|++|+++.+..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~--~g~~V~~~~r~~ 54 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLP--QGHEILVIDNFA 54 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGG--GTCEEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEECCC
Confidence 457999998 9999999999998 579999999753
No 429
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=74.60 E-value=2.2 Score=39.66 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=27.6
Q ss_pred cEEEECcchHHHHHHHHHhccCCC-CcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPK-LNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g-~~V~llE~~ 84 (485)
.|.|||+|..|...|..|++ .| .+|++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~--~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVK--QGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHH--HCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHH--CCCCeEEEECCC
Confidence 58999999999999999988 57 899999964
No 430
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=74.55 E-value=3.1 Score=39.42 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=28.7
Q ss_pred CcEEEECc-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||+ |..|...|..|++ .|++|++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~--~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD--SAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH--SSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 57999999 9999999999998 67899999964
No 431
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=74.35 E-value=2.5 Score=40.16 Aligned_cols=32 Identities=22% Similarity=0.112 Sum_probs=28.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||+|..|...|..|++ .|++|++++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK--EGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 579999999999999999988 67899999964
No 432
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=74.27 E-value=3 Score=39.26 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=27.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
..|.|||+|..|...|..|++ .|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~--~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHh--cCCCcEEEEEeCC
Confidence 369999999999999999998 566 89999964
No 433
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=74.18 E-value=3.3 Score=38.26 Aligned_cols=32 Identities=9% Similarity=0.152 Sum_probs=27.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC----cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL----NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~----~V~llE~~ 84 (485)
..|.|||+|..|...|..|.+ .|+ +|++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~--~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMIN--KNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHh--CCCCCCCeEEEEeCC
Confidence 479999999999999999998 566 88888864
No 434
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=74.16 E-value=1.8 Score=42.84 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=28.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCC-------CcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPK-------LNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g-------~~V~llE~~ 84 (485)
..|.|||+|..|...|..|++ .| .+|+++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~--~G~~~~~~~~~V~~~~r~ 60 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGT--NAKNNYLFENEVRMWIRD 60 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHH--HHHHCTTBCSCEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHHH--cCCccCCCCCeEEEEECC
Confidence 469999999999999999988 56 899999964
No 435
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=74.03 E-value=3.1 Score=43.12 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=29.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|...|..|++ .|++|+++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~--~G~~V~v~dr~ 42 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAAD--HGFTVCAYNRT 42 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4579999999999999999999 68999999965
No 436
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=73.98 E-value=2.9 Score=38.78 Aligned_cols=32 Identities=13% Similarity=0.071 Sum_probs=28.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||.|..|...|..|++ .|.+|.+++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~--~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ--TPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--SSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHh--CCCeEEEECCC
Confidence 579999999999999999988 56889999964
No 437
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=73.87 E-value=2.5 Score=41.17 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=28.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC--cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL--NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~--~V~llE~~ 84 (485)
...|.|||+|..|.+.|..|+.. +. +|+++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ--GITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecc
Confidence 35799999999999999999883 44 89999953
No 438
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=73.64 E-value=3.2 Score=38.85 Aligned_cols=33 Identities=9% Similarity=0.055 Sum_probs=29.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+..|+|.|+|..|...+..|.+ .|++|+++.|.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~--~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAP--QGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGG--GTCEEEEEESC
T ss_pred cCcEEEECCcHHHHHHHHHHHH--CCCEEEEEEcC
Confidence 4689999999999999999998 58999999975
No 439
>3iz6_M 40S ribosomal protein S18 (S13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=73.48 E-value=3.7 Score=35.22 Aligned_cols=39 Identities=8% Similarity=0.160 Sum_probs=35.7
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011458 362 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 400 (485)
Q Consensus 362 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 400 (485)
.+-.+++..+|+.++|++++++.+|+++|+..|...+.+
T Consensus 35 GIG~~~A~~I~~~~gid~~~r~g~Lt~~ei~~l~~~i~~ 73 (152)
T 3iz6_M 35 GVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVVHN 73 (152)
T ss_dssp TCCHHHHHHHHHHHTCCSSSBTTTSCHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHcCCCCCcEeCcCCHHHHHHHHHHHHh
Confidence 466889999999999999999999999999999998865
No 440
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=73.47 E-value=2.9 Score=39.64 Aligned_cols=31 Identities=16% Similarity=0.045 Sum_probs=27.9
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+|.|||.|..|...|..|++ .|++|++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~--~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK--HGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH--TTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 58999999999999999988 67899999964
No 441
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=73.38 E-value=3.7 Score=39.67 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=29.6
Q ss_pred CCcEEEECc-chHHHHHHHHHhccCCCCcEEEEeCCC
Q 011458 50 EELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKGK 85 (485)
Q Consensus 50 ~~dViIIGg-G~aGl~aA~~la~~~~g~~V~llE~~~ 85 (485)
...|+|.|| |..|...+..|.+ .|.+|+++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~ 61 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMM--DGHEVTVVDNFF 61 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEECCS
T ss_pred CCEEEEEcCccHHHHHHHHHHHH--CCCEEEEEeCCC
Confidence 467999998 9999999999998 689999999653
No 442
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=72.97 E-value=1.7 Score=39.88 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=27.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|+|+|..|...|..|.+ .|. |+++|++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~--~g~-v~vid~~ 40 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRG--SEV-FVLAEDE 40 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTT--SEE-EEEESCG
T ss_pred CCEEEEECCChHHHHHHHHHHh--CCe-EEEEECC
Confidence 3479999999999999999987 578 9999965
No 443
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=72.74 E-value=1.4 Score=39.14 Aligned_cols=40 Identities=15% Similarity=0.228 Sum_probs=31.5
Q ss_pred ccCCCCeEEEEeeeecccCcchHHHHHHHHHHHHHHHHHhHHhh
Q 011458 433 SKIHPRLFFAGEVLNVDGVTGGFNFQNAWSGGYIAGTSIGKLSN 476 (485)
Q Consensus 433 sk~~~gLy~~GE~lDv~g~~GGynl~~A~~sG~~AG~~a~~~~~ 476 (485)
.+++.+||||||-.. . ..|| ++.|+.||..|+..+.+...
T Consensus 114 ~~p~grl~FAGe~ts-~--~~g~-~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 114 VRPEGPVYFAGEHVS-L--KHAW-IEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp HSCBTTEEECSGGGT-T--STTS-HHHHHHHHHHHHHHHHTCCC
T ss_pred hCCCCcEEEEEHHHc-C--CccC-HHHHHHHHHHHHHHHHHHhc
Confidence 456789999999665 2 4564 99999999999999876553
No 444
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=72.72 E-value=3 Score=39.69 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=28.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
...++|||+|.+|..+|..|++ .|. +|+|+.|.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~--~G~~~v~v~~R~ 150 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYK--IVRPTLTVANRT 150 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHT--TCCSCCEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEeCC
Confidence 4579999999999999999998 576 88888864
No 445
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=72.70 E-value=3.6 Score=39.92 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=27.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
...++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~--~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAAL--DGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH--TTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHH--CCCCEEEEEECC
Confidence 4579999999999999999998 576 78888764
No 446
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=72.69 E-value=3.5 Score=39.32 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=27.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
...++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~--~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVT--HGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEECC
Confidence 4579999999999999999998 566 58887653
No 447
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=72.66 E-value=3.3 Score=43.68 Aligned_cols=35 Identities=14% Similarity=0.359 Sum_probs=29.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (485)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~--aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCcc
Confidence 3579999999999999999999 554 7999996543
No 448
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=72.57 E-value=2.9 Score=41.97 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=27.1
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.|.|||.|..|+..|..|++ |++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~---G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL---QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC---CCEEEEEECC
Confidence 68999999999999999987 5899999964
No 449
>2xzm_M RPS18E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_M
Probab=72.49 E-value=4.4 Score=34.85 Aligned_cols=39 Identities=13% Similarity=0.101 Sum_probs=35.6
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011458 362 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 400 (485)
Q Consensus 362 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 400 (485)
.+-.+++..+|+.+++++++++.+|+++++..|...+.+
T Consensus 37 GIG~~~A~~I~~~~gid~~~r~~~Lt~~ei~~l~~~i~~ 75 (155)
T 2xzm_M 37 GIGRRFAYIICKVLKIDPNARAGLLTEDQCNKITDLIAD 75 (155)
T ss_dssp TCCHHHHHHHHHHTTCCSSSCSSCSCHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHcCCCcccccccCCHHHHHHHHHHHhC
Confidence 466889999999999999999999999999999888776
No 450
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=72.42 E-value=2.7 Score=40.72 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=26.9
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.|.|||+|..|.+.|+.+++.+...+|+|+|.+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 699999999999999999884222289999953
No 451
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=72.25 E-value=3 Score=41.13 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=29.5
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (485)
...|+|||+|..|..+|..|++. |. +++|+|.+.+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a--Gvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS--GIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH--TCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC--CCCeEEEECCCcC
Confidence 35799999999999999999994 54 7999997644
No 452
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=72.24 E-value=3.5 Score=38.94 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=28.8
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|.|||+|..|...|..|++.+.+.+|++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 5799999999999999999884336789999964
No 453
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=72.23 E-value=8.2 Score=39.51 Aligned_cols=36 Identities=19% Similarity=0.113 Sum_probs=29.6
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC---cEEEEeCCCCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL---NVVIIEKGKPL 87 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~---~V~llE~~~~g 87 (485)
.+|+|||+|..|-.+|.-++++ .+. +|+++|+...+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~-~dv~~~~I~vaD~~~~~ 52 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK-FDIKPSQVTIIAAEGTK 52 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-BCCCGGGEEEEESSCCS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-CCCceeEEEEeccchhh
Confidence 5799999999999999999885 455 79999965444
No 454
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=72.21 E-value=3.7 Score=38.39 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=27.6
Q ss_pred cEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
.++|||+|-+|.+++..|.+ .|. +|+|++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~--~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQ--MGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHH--TTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHH--cCCCEEEEEeCC
Confidence 79999999999999999998 566 89999864
No 455
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=72.20 E-value=3.5 Score=39.51 Aligned_cols=32 Identities=28% Similarity=0.288 Sum_probs=28.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+..|.|||+|..|...|..++ . |++|+++|++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECC
Confidence 457999999999999999888 4 7899999965
No 456
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=71.89 E-value=4 Score=40.00 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=29.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|.+.|..|++ .|.+|+++|++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~--~G~~V~~~dr~ 40 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHA--ANHSVFGYNRS 40 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSC
T ss_pred CCEEEEEeecHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 3479999999999999999998 68999999965
No 457
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=71.87 E-value=3.5 Score=39.92 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=28.2
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|..|...|+.|+..+....|.|+|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 35899999999999999999984222479999953
No 458
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=71.87 E-value=3.4 Score=39.25 Aligned_cols=30 Identities=23% Similarity=0.392 Sum_probs=26.2
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
..++|+|+|..|...|..|++ .| +|++++|
T Consensus 129 k~vlV~GaGgiG~aia~~L~~--~G-~V~v~~r 158 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAK--DN-NIIIANR 158 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTS--SS-EEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHH--CC-CEEEEEC
Confidence 479999999999999999998 57 8888775
No 459
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=71.80 E-value=1 Score=44.83 Aligned_cols=59 Identities=8% Similarity=0.064 Sum_probs=44.5
Q ss_pred HHHHHHCCCCCccEEEeCceEEEEEEcCCCCeEEEEEeeecCCceEEEEcCeEEEecCCCchhHHHHHHCCC
Q 011458 169 LTEAKHRGVAPSVVLQTGKVVTTASSDNAGRKFLLKVEKRTMNLVECIEADYLLIASGSSQQGHRLAAQLGH 240 (485)
Q Consensus 169 ~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~i~ad~VIlAtG~~~~g~~la~~~G~ 240 (485)
...+++.|+ +++.++++..++.+. ....+.+.+ ++++.+|.||+|+|..+. .+++..|+
T Consensus 209 ~~~l~~~gi----~v~~~~~v~~v~~~~--~~~~v~~~~-----g~~i~~D~vi~~~g~~~~--~~~~~~gl 267 (401)
T 3vrd_B 209 GFGTENALI----EWHPGPDAAVVKTDT--EAMTVETSF-----GETFKAAVINLIPPQRAG--KIAQSASL 267 (401)
T ss_dssp CTTSTTCSE----EEECTTTTCEEEEET--TTTEEEETT-----SCEEECSEEEECCCEEEC--HHHHHTTC
T ss_pred HHHHHhcCc----EEEeCceEEEEEecc--cceEEEcCC-----CcEEEeeEEEEecCcCCc--hhHhhccc
Confidence 344467789 999999999988764 445677765 678999999999997653 56666665
No 460
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=71.77 E-value=3.5 Score=43.57 Aligned_cols=35 Identities=14% Similarity=0.359 Sum_probs=29.7
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (485)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~--aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIA--WGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCCC
Confidence 3589999999999999999999 454 7999997643
No 461
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=71.65 E-value=4.1 Score=41.05 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=28.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
...|+|||+|..|.+.+..+.+ .|.+|+++|.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~--lG~~v~v~d~ 66 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQS--MGYRVAVLDP 66 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEECC
Confidence 4579999999999999999988 6899999994
No 462
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=71.58 E-value=3.4 Score=42.51 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=29.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|+|+|..|..+|..|+. .|.+|++.|++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa--~GA~Viv~D~~ 297 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQ--AGARVIVTEID 297 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 3579999999999999999998 68899999854
No 463
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=71.45 E-value=3.8 Score=40.21 Aligned_cols=35 Identities=29% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCcEEEECc-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+ |..|..+|+.++.++...+|+|+|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 357999997 99999999999884322489999953
No 464
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=71.43 E-value=2.3 Score=42.86 Aligned_cols=54 Identities=15% Similarity=0.031 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHHHHHCCCCCccEEEeCceEEEEEEcCCCCe-EEEEEeeecCCceEEEEcCeEEEecCCC
Q 011458 160 SSSSVIDCLLTEAKHRGVAPSVVLQTGKVVTTASSDNAGRK-FLLKVEKRTMNLVECIEADYLLIASGSS 228 (485)
Q Consensus 160 ~a~~v~~~L~~~l~~~GV~~~~~i~~~~~V~~i~~~~~~~~-~~V~~~~~~~~~~~~i~ad~VIlAtG~~ 228 (485)
....+.+.|.+.+ |+ +|+++++|++|..++ +. +.|+++ ++++.||.||+|++..
T Consensus 213 G~~~l~~~l~~~l---g~----~i~~~~~V~~i~~~~--~~~v~v~~~------~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 213 GMQQVSIRMAEAL---GD----DVFLNAPVRTVKWNE--SGATVLADG------DIRVEASRVILAVPPN 267 (453)
T ss_dssp CTHHHHHHHHHHH---GG----GEECSCCEEEEEEET--TEEEEEETT------TEEEEEEEEEECSCGG
T ss_pred ChHHHHHHHHHhc---CC----cEEcCCceEEEEEeC--CceEEEEEC------CeEEEcCEEEEcCCHH
Confidence 3456667776544 78 999999999998774 55 777653 5689999999999853
No 465
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=71.35 E-value=4 Score=39.04 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=28.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|..+|..|.. .|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAA--LGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHH--CCCEEEEEECC
Confidence 4579999999999999999987 57899999864
No 466
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=71.28 E-value=3.1 Score=38.62 Aligned_cols=32 Identities=19% Similarity=0.050 Sum_probs=27.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCC----CcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPK----LNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g----~~V~llE~~ 84 (485)
..|.|||+|..|...|..|++ .| .+|+++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~--~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIAN--ANIIKKENLFYYGPS 40 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHH--HTSSCGGGEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCCCCCeEEEEeCC
Confidence 479999999999999999988 46 689999964
No 467
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=71.26 E-value=1.4 Score=45.45 Aligned_cols=37 Identities=24% Similarity=0.439 Sum_probs=32.2
Q ss_pred CCCCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 48 SSEELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 48 ~~~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+..+||+|||||++|++||..|++...+.+|+|||+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~ 45 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSED 45 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 3468999999999999999999875568999999965
No 468
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=71.16 E-value=8.1 Score=37.64 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=29.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|...|..|+. .|.+|+++++.
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~--~G~~V~~~dr~ 196 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEA--FDCPISYFSRS 196 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHT--TTCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEECCC
Confidence 3579999999999999999987 68999999954
No 469
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=70.99 E-value=4.2 Score=38.75 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=28.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|..+|..|.. .|.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAA--LGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 3579999999999999999987 57899999964
No 470
>2vqe_M 30S ribosomal protein S13, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.156.1.1 PDB: 1gix_P* 1hnw_M* 1hnx_M* 1hnz_M* 1hr0_M 1ibk_M* 1ibl_M* 1ibm_M 1j5e_M 1jgo_P* 1jgp_P* 1jgq_P* 1mj1_P* 1ml5_P* 1n32_M* 1n33_M* 1n34_M 1n36_M 1xmo_M* 1xmq_M* ...
Probab=70.95 E-value=2.7 Score=34.85 Aligned_cols=39 Identities=13% Similarity=0.178 Sum_probs=35.0
Q ss_pred chhHHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHhcc
Q 011458 362 CLVKRFWKYILGREGLSGDTLWASVSNNSLISIARLLKH 400 (485)
Q Consensus 362 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~l~~~l~~ 400 (485)
.+-.+.+..+|+.+++++++++.+|+++|+..|...+.+
T Consensus 24 GIG~~~A~~I~~~~gi~~~~r~~~Lt~~ei~~l~~~i~~ 62 (126)
T 2vqe_M 24 GIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVEN 62 (126)
T ss_dssp SCCSHHHHHHTTTTTCCTTSBGGGCCHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHcCCCcccccCcCCHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999988874
No 471
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=70.95 E-value=3.7 Score=42.32 Aligned_cols=33 Identities=9% Similarity=0.133 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|.|||.|..|...|..|++ .|++|++++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~--~G~~V~v~dr~ 36 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMND--HGFVVCAFNRT 36 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCEEEEEChhHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 3579999999999999999999 68999999965
No 472
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=70.79 E-value=4.1 Score=39.68 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=28.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|..|.+.|+.|+..+....+.|+|.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 46899999999999999999874222379999953
No 473
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=70.62 E-value=4.6 Score=38.41 Aligned_cols=32 Identities=9% Similarity=0.177 Sum_probs=27.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEK 83 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~ 83 (485)
...++|+|+|-+|...|..|++ .|. +|+|+.|
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~--~G~~~v~v~~R 158 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLD--QQPASITVTNR 158 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TCCSEEEEEES
T ss_pred CCEEEEECchHHHHHHHHHHHh--cCCCeEEEEEC
Confidence 4579999999999999999998 574 7888775
No 474
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=70.62 E-value=3.4 Score=42.54 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=28.5
Q ss_pred cEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
+|.|||.|..|...|..|++ .|++|+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~--~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAE--KGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 69999999999999999998 68899999964
No 475
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=70.58 E-value=3.6 Score=42.34 Aligned_cols=32 Identities=9% Similarity=0.120 Sum_probs=28.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+|.|||.|..|...|..|++ .|++|+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~--~G~~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND--HGFVVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 479999999999999999998 68899999964
No 476
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=70.47 E-value=4 Score=39.61 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=28.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..+|+|||+|..|.+.|+.|+..+....+.|+|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 36899999999999999999884222379999953
No 477
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=70.39 E-value=4 Score=38.90 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=28.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
...++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~--~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKD--NFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHH--TTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHH--cCCCEEEEEeCC
Confidence 4589999999999999999998 576 78888764
No 478
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=70.21 E-value=3.1 Score=39.35 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=27.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|||+|.+|.+.|..|.+ .|.+|+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~--~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVK--EGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHH--HTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHH--cCCEEEEEECC
Confidence 3579999999999999999988 45688887753
No 479
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=69.96 E-value=2.3 Score=40.31 Aligned_cols=30 Identities=20% Similarity=0.127 Sum_probs=27.4
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEe
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIE 82 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE 82 (485)
..|.|||+|..|...|..|++ .|++|++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR--AGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH--TTCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHh--CCCEEEEEc
Confidence 479999999999999999988 678999998
No 480
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=69.90 E-value=4.5 Score=38.28 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=27.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
...++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~--~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ--AGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH--TCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHH--cCCCEEEEEeCC
Confidence 4579999999999999999998 574 78887753
No 481
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=69.90 E-value=3.4 Score=40.30 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=27.9
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||+|..|.+.|+.|+..+...+++|+|.+
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 35799999999999999999884221289999953
No 482
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=69.76 E-value=2.2 Score=41.76 Aligned_cols=32 Identities=19% Similarity=0.071 Sum_probs=28.3
Q ss_pred CcEEEECcchHHHHHHHHHhccCCC-------CcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPK-------LNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g-------~~V~llE~~ 84 (485)
..|.|||+|..|...|..|++ .| .+|++++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~--~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGG--NAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--HHHHCTTEEEEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHh--cCCcccCCCCeEEEEEcC
Confidence 479999999999999999988 56 789999965
No 483
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=69.73 E-value=4.9 Score=38.07 Aligned_cols=32 Identities=9% Similarity=0.231 Sum_probs=28.0
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCC---cEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKL---NVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~---~V~llE~~ 84 (485)
..|.|||+|..|.+.|..+++ .|+ +|++.+++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~--~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIA--NGYDPNRICVTNRS 38 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHH--TTCCGGGEEEECSS
T ss_pred CEEEEEcccHHHHHHHHHHHH--CCCCCCeEEEEeCC
Confidence 579999999999999999998 566 89999964
No 484
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=69.72 E-value=4.1 Score=41.40 Aligned_cols=31 Identities=32% Similarity=0.392 Sum_probs=27.6
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC---cEEEEe
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL---NVVIIE 82 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~---~V~llE 82 (485)
...|+|+|+|.+|..+|..|.+ .|. +|+|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~--~G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTE--AGVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHH--TTCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHH--cCCCcCeEEEEE
Confidence 3579999999999999999998 576 799998
No 485
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=69.48 E-value=4.7 Score=38.98 Aligned_cols=33 Identities=15% Similarity=0.322 Sum_probs=27.4
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~ 84 (485)
...++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~--~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAI--EGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHH--cCCCEEEEEECC
Confidence 4579999999999999999998 566 68877753
No 486
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=69.25 E-value=4.4 Score=40.51 Aligned_cols=32 Identities=13% Similarity=0.240 Sum_probs=28.1
Q ss_pred CCcEEEECc-chHHHHHHHHHhccCCCC---cEEEEeC
Q 011458 50 EELLVVVGG-GAAGVYGAIRAKTVAPKL---NVVIIEK 83 (485)
Q Consensus 50 ~~dViIIGg-G~aGl~aA~~la~~~~g~---~V~llE~ 83 (485)
...|+|||| |.+|+.|+-.+.. -|+ +|+++|.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~--lGa~~~~V~v~D~ 249 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHK--VGIPDANILKWDI 249 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHH--TTCCGGGEEEECH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHh--CCCCcCceEEeec
Confidence 468999999 9999999998888 576 8999994
No 487
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=69.24 E-value=4.8 Score=40.88 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=29.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGKP 86 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~~ 86 (485)
...|+|||+|..|..+|..|++ .|. +++|+|.+.+
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~--aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLAL--SGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHH--TTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHH--cCCCEEEEEcCCEe
Confidence 4589999999999999999999 454 8999996643
No 488
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=69.23 E-value=4.1 Score=42.69 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=29.5
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..++|||+|..|...|..|.+ .|.+|+++|++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~--~g~~v~vid~d 380 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDR--KPVPFILIDRQ 380 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 579999999999999999998 68999999965
No 489
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=69.08 E-value=6.6 Score=38.25 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=28.8
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|.|||.|..|...|..|+. .|.+|+++++.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~--~G~~V~~~d~~ 182 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKG--FNMRILYYSRT 182 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEEccCHHHHHHHHHHHh--CCCEEEEECCC
Confidence 4579999999999999999988 68899999854
No 490
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=69.06 E-value=4.3 Score=39.27 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=27.5
Q ss_pred cEEEECc-chHHHHHHHHHhccCCC--CcEEEEeCCC
Q 011458 52 LLVVVGG-GAAGVYGAIRAKTVAPK--LNVVIIEKGK 85 (485)
Q Consensus 52 dViIIGg-G~aGl~aA~~la~~~~g--~~V~llE~~~ 85 (485)
+|+|||+ |..|...|..|+. .+ .+|+++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~--~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN--SPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT--CTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHh--CCCCcEEEEEeCCc
Confidence 6999998 9999999999998 45 6899999543
No 491
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=68.98 E-value=3.7 Score=40.32 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=29.1
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCC-cEEEEeCCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKL-NVVIIEKGK 85 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~-~V~llE~~~ 85 (485)
...|+|||+|..|..+|..|++ .|. +++|+|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~--~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLIL--AGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCCCEEEEEECCC
Confidence 3589999999999999999999 455 899999653
No 492
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=68.75 E-value=3 Score=42.86 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=29.0
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
...|+|+|+|.+|...|..|++. .+.+|++++|+
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~-~g~~V~v~~R~ 56 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAN-DDINVTVACRT 56 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-TTEEEEEEESS
T ss_pred CCEEEEECChHHHHHHHHHHHhC-CCCeEEEEECC
Confidence 35799999999999999999984 36799999975
No 493
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=68.75 E-value=3.7 Score=38.26 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=27.5
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCc-EEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLN-VVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~-V~llE~~ 84 (485)
..|.|||+|..|...|..+++ .|++ |.+++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~--~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYR--KGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHH--CCCeEEEEEeCC
Confidence 479999999999999999988 4777 8888864
No 494
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=68.38 E-value=5.2 Score=35.50 Aligned_cols=31 Identities=26% Similarity=0.279 Sum_probs=27.8
Q ss_pred cEEEECc-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.|+|+|| |..|...+..|++ .|++|+++.|+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~--~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN--RGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHh--CCCEEEEEEcC
Confidence 5999996 9999999999998 68999999975
No 495
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=68.37 E-value=3.7 Score=41.65 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=29.1
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.+..|||.|..|+..|..|++ .|++|+++|++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~--~G~~V~~~D~~ 43 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAK--HGVDVLGVDIN 43 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred CccEEEeeCHHHHHHHHHHHH--CCCEEEEEECC
Confidence 368899999999999999999 68999999964
No 496
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=68.22 E-value=5.3 Score=35.68 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=28.0
Q ss_pred cEEEECc-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 52 LLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.|+|.|| |..|...+..|++ .|.+|+++.|+
T Consensus 2 kilVtGatG~iG~~l~~~L~~--~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARR--RGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHH--CCCEEEEEEec
Confidence 5999998 9999999999998 68999999975
No 497
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=68.16 E-value=5.6 Score=38.27 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=25.4
Q ss_pred CcEEEECc-chHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGG-GAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGg-G~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
.-++|.|| |-.|...|..|++ .|.+|++++++
T Consensus 28 k~vlVTGas~GIG~aia~~la~--~G~~Vv~~~r~ 60 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAA--EGARVVVNDIG 60 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH--TTCEEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCc
Confidence 34677776 4578889999998 68999999864
No 498
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=67.90 E-value=5 Score=39.70 Aligned_cols=32 Identities=16% Similarity=0.092 Sum_probs=28.3
Q ss_pred CCcEEEECcchHHHHHHHHHhccCCCCcEEEEeC
Q 011458 50 EELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEK 83 (485)
Q Consensus 50 ~~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~ 83 (485)
...|+|+|.|..|..+|..|.+ .|.+|++.|+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~--~GakVvv~D~ 204 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNT--EGAKLVVTDV 204 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TTCEEEEECS
T ss_pred cCEEEEECchHHHHHHHHHHHH--CCCEEEEEcC
Confidence 4579999999999999999998 6889988874
No 499
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=67.78 E-value=5.7 Score=37.12 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=28.9
Q ss_pred CcEEEECcchHHHHHHHHHhccCCCCcEEEEeCC
Q 011458 51 ELLVVVGGGAAGVYGAIRAKTVAPKLNVVIIEKG 84 (485)
Q Consensus 51 ~dViIIGgG~aGl~aA~~la~~~~g~~V~llE~~ 84 (485)
..|+|.|+|..|...+..|.+ .|.+|+++.|.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~--~g~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTA--QGHEVTGLRRS 35 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEEECT
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 479999999999999999998 68999999965
No 500
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=67.78 E-value=6.8 Score=35.01 Aligned_cols=31 Identities=6% Similarity=0.219 Sum_probs=27.4
Q ss_pred cEEEECc-chHHHHHHHHHh-ccCCCCcEEEEeCC
Q 011458 52 LLVVVGG-GAAGVYGAIRAK-TVAPKLNVVIIEKG 84 (485)
Q Consensus 52 dViIIGg-G~aGl~aA~~la-~~~~g~~V~llE~~ 84 (485)
.|+|.|| |..|...|..|+ + .|++|+++.|+
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~--~g~~V~~~~r~ 39 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTY--TDMHITLYGRQ 39 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHH--CCCEEEEEESS
T ss_pred EEEEEeCCcHHHHHHHHHHHhc--CCceEEEEecC
Confidence 4999996 899999999999 6 68999999975
Done!