BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011461
(485 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC2A9.03 PE=4 SV=2
Length = 426
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 23/323 (7%)
Query: 152 SYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGH 211
S+YEF+R ++ H L V +H V +S+ S+ ++L + Q++++ +
Sbjct: 117 SFYEFQRFLKNPNCLRNHHHLCKSVKVVGEHSVIYVSNNSIRMENTLHDNSVQIIDLKNN 176
Query: 212 VAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN 271
+ + +S L + + G G+ C + G SF +R DD+
Sbjct: 177 I-------------LQKKAISCLDTTNAVGCLGTLYGQY-CIFNFKNG-SFSTRKLSDDS 221
Query: 272 AITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLI 331
N ++++ F ND V D+ + +R VN + L +
Sbjct: 222 --INHIQLFSEKK----FILGCNDGAVYVEDVQRTSPILVYRCSNAVNCVQLFDETPLAL 275
Query: 332 IVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE 391
+ D+ D +L+D + A L H D +WHPNG ATG QD T ++WD+R L +
Sbjct: 276 VCTDSKDAMLIDIRSNSVSAKL-PHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGK 334
Query: 392 SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFS 451
S L + A+ ++ ++ G +A E ADFV ++D K + Q IDFFGEI+G ++S
Sbjct: 335 SFRNLGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTKL-FNTSQVIDFFGEIAGTAYS 393
Query: 452 PDTESLFIGVWDRTYGSLLEYGR 474
+SLFIGV D G +LE+ R
Sbjct: 394 SSGDSLFIGVDDPMLGGILEFRR 416
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 260 VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM--GKYQLSKHFRFPWP 317
+S C T N ++ A SP G + T + DC VR +++ GK L W
Sbjct: 633 LSCCVFTETLGNILSAAF----SPEGQLLATC-DTDCHVRVWEVKSGKLLLICRGHSNW- 686
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
V SPDG++L G + + L G I +L GH F+ A+HP+G T A+ +
Sbjct: 687 VRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASG 746
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 437
DKT ++WD+++ + L G+ +R + ++ DG +A++ + ++DV G
Sbjct: 747 DKTIKLWDIQD-GTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRT 805
Query: 438 EIDFFGEISGISFSPDTESLFIGVWDRT 465
G + ++FS D ++L G DRT
Sbjct: 806 LKSHTGWVRSVAFSADGQTLASGSGDRT 833
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 283 PSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQ------SPDGKLLIIVGDN 336
P G + T S DC V+ +++ Q K HS + SPDG+LL +
Sbjct: 1030 PQGKIIATGSA-DCTVKLWNISTGQCLKTLS-----EHSDKILGMAWSPDGQLLASASAD 1083
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 396
L D TG+ + L GH + +++ + PNG AT + D+T +IWD + + + L
Sbjct: 1084 QSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ-GKCLKTL 1142
Query: 397 KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTES 456
G+ + I ++ DG+ +A+A V ++DV +G I +S ++FSPD E
Sbjct: 1143 TGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEV 1202
Query: 457 LFIG-------VWDRTYGSLLEYGRCR 476
+ G +W+ G L+ R +
Sbjct: 1203 VASGSQDQTVRIWNVKTGECLQILRAK 1229
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPD ++L ++ L D TGK I+SL GH DF + A+ P+ T A+ + D + R+
Sbjct: 945 SPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRL 1004
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
W++ + + +L + + ++ + G+ +AT V ++++ +G + +
Sbjct: 1005 WNI-STGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSD 1063
Query: 444 EISGISFSPDTESL 457
+I G+++SPD + L
Sbjct: 1064 KILGMAWSPDGQLL 1077
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG+ L V + L + TG+ + + G+ D++ A+ P+ A+G+ DKT ++
Sbjct: 903 SPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKL 962
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD + + ++ L+G+ I I ++ D + +A+A V ++++ +G + ++
Sbjct: 963 WDWQT-GKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTD 1021
Query: 444 EISGISFSPDTESLFIG-------VWDRTYGSLLE 471
+ + F P + + G +W+ + G L+
Sbjct: 1022 WVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLK 1056
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPD K+L+ + L D T I +L GH + + A+ P+G T A + D++ R+
Sbjct: 861 SPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRL 920
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY---EKEQEID 440
W+ R + + GN + ++ D + +A+ V ++D ++G E D
Sbjct: 921 WNCRT-GQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTD 979
Query: 441 FFGEISGISFSPDTESL 457
F I GI+FSPD+++L
Sbjct: 980 F---IYGIAFSPDSQTL 993
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG L + L D GK + +L H + + A+ +G T A+G+ D+T +I
Sbjct: 777 SPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKI 836
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
W+ E + G+ ++ SI Y+ D + + + + ++D ++ +
Sbjct: 837 WNYHT-GECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTN 895
Query: 444 EISGISFSPDTESL 457
E+ ++FSPD ++L
Sbjct: 896 EVCSVAFSPDGQTL 909
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 282 SPSGAVHFTASNND-CGVRDFDMGK--YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPD 338
SP+G + T S + + D+ GK L+ H + + + S PDGK+L +
Sbjct: 1113 SPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFS---PDGKILASASHDQT 1169
Query: 339 GLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG 398
+ D TGK GH + A+ P+G A+G+QD+T RIW+++ E + +L+
Sbjct: 1170 VRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKT-GECLQILRA 1228
Query: 399 N 399
Sbjct: 1229 K 1229
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
VN S+ SPDG+ L+ D+ + + +G+ + L GH + + P+G A+ +
Sbjct: 29 VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSS 88
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 437
D + R+WD+ S+ + VLKG+ ++ ++ ++ D + +A+ V++V+SG
Sbjct: 89 DHSIRLWDVAR-SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHL 147
Query: 438 EIDFFGEISGISFSPDTESLFIGVWDRT 465
+ I FSP ++SL G WD T
Sbjct: 148 LVGHCDSIQSSDFSPTSDSLATGSWDST 175
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 282 SPSGAVHFTASNNDCGVRDFDMGKYQ----LSKHFRFPWPVNHSSQSPDGKLLIIVGDNP 337
SP G + +S++D +R +D+ + + L H R V S SPD K L G +
Sbjct: 77 SPDGRL-IASSSSDHSIRLWDVARSKCLHVLKGHQR---SVETVSFSPDSKQLASGGWDK 132
Query: 338 DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAV-- 395
++ + +G+ + L GH D +S + P + ATG+ D T IWDLR + V+
Sbjct: 133 RAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN 192
Query: 396 LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE 455
L+G+ G I + Y++ G +A+ + V+ + Q ++ ++FSPD
Sbjct: 193 LEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDEL 251
Query: 456 SLF-------IGVWDRTYGSLLE 471
L + VWD G LE
Sbjct: 252 KLASAGYSRTVKVWDCLTGKCLE 274
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 282 SPSGAVHFTASNNDC----GVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNP 337
SP G TAS++ C G + + ++L+ H PV SPDG+L+ +
Sbjct: 35 SPDGRTLLTASDDGCVYVWGTKSGRL-LWRLAGHRG---PVKSCCFSPDGRLIASSSSDH 90
Query: 338 DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK 397
L D K + L GH ++ P+ A+G DK +W++++ V +L
Sbjct: 91 SIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS-GRRVHLLV 149
Query: 398 GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTES- 456
G+ +I+S ++ +AT VH++D+++ + G IS + S
Sbjct: 150 GHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG 209
Query: 457 -LFIGVWDRT 465
L G WD+T
Sbjct: 210 LLASGSWDKT 219
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 282 SPSGAVHFTASNNDCGVRDFDMGKYQ----LSKHFRFPWPVNHSSQSPDGKLLIIVGDNP 337
SP G + F +++ DC VR +D+ + + L H R V S SPD + L G +
Sbjct: 72 SPDGHL-FASASCDCTVRLWDVARAKCLRVLKGHQR---SVETVSFSPDSRQLASGGWDK 127
Query: 338 DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVA--V 395
+L D +G+ + L GH D +S + P ATG+ D T IWDLR ++ +V+
Sbjct: 128 RVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQA 187
Query: 396 LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE 455
L+G+ I + Y++ G +A+ +H++ + Q + I+FSPD
Sbjct: 188 LEGHSANISCLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDEL 246
Query: 456 SL-------FIGVWDRTYGSLLE 471
L + VWD G LE
Sbjct: 247 WLASAGYSRMVKVWDCNTGKCLE 269
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 362 ASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA 421
+SA+ P+G TG++D W+ R+ + + L G+ G ++ R++ DG A+A
Sbjct: 26 SSAFSPDGQMLLTGSEDGCVYGWETRS-GQLLWRLGGHTGPVKFCRFSPDGHLFASASCD 84
Query: 422 DFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 464
V ++DV + +SFSPD+ L G WD+
Sbjct: 85 CTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK 127
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 282 SPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGL 340
SP G + T S + C V ++ QL PV SPDG L +
Sbjct: 30 SPDGQMLLTGSEDGC-VYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVR 88
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L D K + L GH ++ P+ A+G DK +WD+++ + + +L G+
Sbjct: 89 LWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQS-GQMLRLLVGHR 147
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTES--LF 458
+I+S ++ +AT VH++D++ G + IS + S L
Sbjct: 148 DSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASGLLA 207
Query: 459 IGVWDRT 465
G WD+T
Sbjct: 208 SGSWDKT 214
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 346 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 405
T + L GH+ + + A+ P+ + A+ + ++WD N + + LKG L +
Sbjct: 222 TSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDC-NTGKCLETLKGVLDVAHT 280
Query: 406 IRYTSDGRYMATA 418
+T DG+ + +
Sbjct: 281 CAFTPDGKILVSG 293
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
+N S S D KL++ D+ + D +G+ + +L GH ++ F ++P+G A+G+
Sbjct: 151 INEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSF 210
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 437
D+T RIW RN ++ + G+ + S+ + DG Y+A+ V ++D +G +
Sbjct: 211 DETIRIWCARN-GNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKT 269
Query: 438 EID-FFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRCR 476
ID I+ + FSP+ + + + T L +Y + R
Sbjct: 270 LIDEEHPPITHVKFSPNGKYILASNLNNTL-KLWDYQKLR 308
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
GHL +HPN TG+ DKTCR+WD+ SV V G+ + ++ DG
Sbjct: 459 FAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR-GHSVRVFNGHTQPVTAVAIAPDG 517
Query: 413 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
MA+A+ +H++D+ +G + G I +SFS ++ L G D T
Sbjct: 518 HTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCT 570
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
L H + + + P+ + ++D + R+W + + VA KG+ G + + + G
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVA-YKGHTGPVWDVAFGPFG 433
Query: 413 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
Y ATA ++ Y ++ ++F P++ + G D+T
Sbjct: 434 HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKT 486
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L D G ++ GH A A P+G T A+ + + +WD+ + ++G+
Sbjct: 489 LWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDI-GTGRRIKTMRGHR 547
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDV-KSGYEKEQEIDFFGEI 445
G I S+ ++ + + + V +DV K+ Y G +
Sbjct: 548 GNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGSV 593
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG+ + D+ + D+++G +L GH D ++ A+ P+G A+G+ D T +I
Sbjct: 1060 SPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKI 1119
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD + L+G+ G + S+ ++ DG+ +A+ + ++D SG + G
Sbjct: 1120 WDAAS-GTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGG 1178
Query: 444 EISGISFSPDTESLFIGVWDRT 465
+ ++FSPD + + G D+T
Sbjct: 1179 WVQSVAFSPDGQRVASGSSDKT 1200
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG+ + D+ + D+ +G +L GH + A+ P+G A+G+ DKT +I
Sbjct: 934 SPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKI 993
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD + L+G+ G++ S+ ++ DG+ +A+ + ++D SG + G
Sbjct: 994 WDTAS-GTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGG 1052
Query: 444 EISGISFSPDTESLFIG-------VWDRTYGSLLE 471
+ + FSPD + + G +WD G+ +
Sbjct: 1053 WVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQ 1087
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 18/177 (10%)
Query: 324 SPDGKLLIIVGDNPDGLLV--DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 381
SPDG+ + + DG + D+ +G +L GH + + A+ P+G A+G+ D T
Sbjct: 1102 SPDGQR--VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTI 1159
Query: 382 RIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 441
+IWD + L+G+ G ++S+ ++ DG+ +A+ + ++D SG +
Sbjct: 1160 KIWDAAS-GTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGH 1218
Query: 442 FGEISGISFSPDTESLFIG-------VWDRTYGSLLE------YGRCRNYSYLDSLI 485
G + ++FSPD + + G +WD G+ + C ++ Y ++ I
Sbjct: 1219 GGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTLNVGSTATCLSFDYTNAYI 1275
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
S DG+ + D+ + D+ +G +L GH ++ A+ P+ A+G+ DKT +I
Sbjct: 850 SADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKI 909
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD + L+G+ G ++S+ ++ DG+ +A+ + ++D SG +
Sbjct: 910 WDAAS-GTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGS 968
Query: 444 EISGISFSPDTESLFIGVWDRT 465
+ ++FSPD + + G D+T
Sbjct: 969 SVLSVAFSPDGQRVASGSGDKT 990
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 352 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 411
+L GH + A+ +G A+G+ DKT +IWD + L+G+ G++ S+ ++ D
Sbjct: 836 TLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTAS-GTGTQTLEGHGGSVWSVAFSPD 894
Query: 412 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 464
+A+ + ++D SG + G + ++FSPD + + G +WD
Sbjct: 895 RERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDA 954
Query: 465 TYGSLLE 471
G+ +
Sbjct: 955 ASGTCTQ 961
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 282 SPSGAVHFTASNNDCGVRDFDMGK----YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNP 337
SP+G V ++D VR +D+ Y L H + VN + SPDG L +
Sbjct: 1125 SPNG-VTLANGSSDQIVRLWDISSKKCLYTLQGHTNW---VNAVAFSPDGATLASGSGDQ 1180
Query: 338 DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK 397
L D + K + L GH + + ++P+G T A+G+ D+T R+W++ N S+ + +
Sbjct: 1181 TVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEI-NSSKCLCTFQ 1239
Query: 398 GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESL 457
G+ + S+ + DG +A+ V ++D+ S ++ ++F+PD L
Sbjct: 1240 GHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSML 1299
Query: 458 FIGVWDRT 465
G D+T
Sbjct: 1300 ASGSGDQT 1307
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG +L + L +GK + +L GH ++ + + P+G A+G+ D+T R+
Sbjct: 1377 SPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRL 1436
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 432
W++ + E + L G++ ++RS+ ++SDG +A+ + + ++DVK+G
Sbjct: 1437 WNISS-GECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTG 1484
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 289 FTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQ------SPDGKLLIIVGDNPDGLLV 342
+ ++D VR +D+ Q K F+ H+S+ SP+ +L + L
Sbjct: 921 LASGSDDQTVRLWDISSGQCLKTFK-----GHTSRVRSVVFSPNSLMLASGSSDQTVRLW 975
Query: 343 DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGA 402
D +G+ + GH + ++ A++ +G ATG+ D+T R+WD+ + S+ + +G+
Sbjct: 976 DISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISS-SQCFYIFQGHTSC 1034
Query: 403 IRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESL----- 457
+RS+ ++SDG +A+ V ++D+ SG + + FSPD L
Sbjct: 1035 VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGD 1094
Query: 458 --FIGVWDRTYGSLL 470
+ +WD + G+ L
Sbjct: 1095 DQIVRLWDISSGNCL 1109
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG +L GD+ L D +G + +L G+ + + PNGVT A G+ D+ R+
Sbjct: 1083 SPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRL 1142
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD+ + + + L+G+ + ++ ++ DG +A+ V ++D+ S
Sbjct: 1143 WDISS-KKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTS 1201
Query: 444 EISGISFSPDTESLFIGVWDRT 465
++ + F+PD +L G D+T
Sbjct: 1202 WVNSVVFNPDGSTLASGSSDQT 1223
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 282 SPSGAVHFTASNNDCGVRDF---DMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPD 338
SP G + A+ + G+ F GK L+ W VN S DGK+L D+
Sbjct: 873 SPDGKLF--ATGDSGGIVRFWEAATGKELLTCKGHNSW-VNSVGFSQDGKMLASGSDDQT 929
Query: 339 GLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG 398
L D +G+ + + GH + + PN + A+G+ D+T R+WD+ + E + + +G
Sbjct: 930 VRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISS-GECLYIFQG 988
Query: 399 NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 431
+ G + S+ + DG +AT V ++D+ S
Sbjct: 989 HTGWVYSVAFNLDGSMLATGSGDQTVRLWDISS 1021
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 7/151 (4%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
VN +PDG +L + L D + K + + GH ++ + A++P+G A+G+
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 437
D+T R+W++ + S+ + +G+ + S+ ++ DG +A+ V ++ + SG E
Sbjct: 1305 DQTVRLWEISS-SKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSG---EC 1360
Query: 438 EIDFFGE---ISGISFSPDTESLFIGVWDRT 465
F G + + FSPD L G D+T
Sbjct: 1361 LYTFLGHTNWVGSVIFSPDGAILASGSGDQT 1391
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
S DG +L D+ L D +G + +L GH + + P+G A+G D+ R+
Sbjct: 1041 SSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRL 1100
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG---YEKEQEID 440
WD+ + + L+G +R + ++ +G +A V ++D+ S Y + +
Sbjct: 1101 WDISS-GNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTN 1159
Query: 441 FFGEISGISFSPDTESLFIGVWDRT 465
+ ++ ++FSPD +L G D+T
Sbjct: 1160 W---VNAVAFSPDGATLASGSGDQT 1181
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
V+ + SPDG +L D+ L +G+ + + GH ++ + + P+G A+G+
Sbjct: 1329 VSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSG 1388
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 432
D+T R+W + + + + L+G+ + SI ++ DG +A+ V ++++ SG
Sbjct: 1389 DQTVRLWSISS-GKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSG 1442
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 282 SPSGAVHFTASNNDCGVRDFDM--GK--YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNP 337
SP GA+ + + D VR + + GK Y L H + V SPDG LL D+
Sbjct: 1377 SPDGAI-LASGSGDQTVRLWSISSGKCLYTLQGHNNW---VGSIVFSPDGTLLASGSDDQ 1432
Query: 338 DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK 397
L + +G+ + +L GH++ + A+ +G+ A+G+ D+T ++WD++ E + LK
Sbjct: 1433 TVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKT-GECIKTLK 1491
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 364 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADF 423
A+ P+G FATG+ R W+ E + KG+ + S+ ++ DG+ +A+
Sbjct: 871 AFSPDGKLFATGDSGGIVRFWEAATGKE-LLTCKGHNSWVNSVGFSQDGKMLASGSDDQT 929
Query: 424 VHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
V ++D+ SG + + + FSP++ L G D+T
Sbjct: 930 VRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQT 971
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 20/193 (10%)
Query: 282 SPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHS------SQSPDGKLLIIVGD 335
SP GA+ + ++D VR +D+ + F H+ + SPDG ++
Sbjct: 510 SPDGAL-LASGSDDATVRLWDVAAAEERAVFE-----GHTHYVLDIAFSPDGSMVASGSR 563
Query: 336 NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAV 395
+ L + TG A L GH D+ +A A+ P+G A+G++D T R+WD+ E V
Sbjct: 564 DGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKER-DV 622
Query: 396 LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG---YEKEQEIDFFGEISGISFSP 452
L+ + S+ ++ DG + VH++DV SG + E D+ + ++FSP
Sbjct: 623 LQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASGEALHTFEGHTDW---VRAVAFSP 678
Query: 453 DTESLFIGVWDRT 465
D L G DRT
Sbjct: 679 DGALLASGSDDRT 691
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 343 DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGA 402
D +G + +L GH D+ A A+ P+G A+G+ D T R+WD+ +E AV +G+
Sbjct: 487 DVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDV-AAAEERAVFEGHTHY 545
Query: 403 IRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 462
+ I ++ DG +A+ +++V +G E + ++FSPD + G
Sbjct: 546 VLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSR 605
Query: 463 DRT 465
D T
Sbjct: 606 DGT 608
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 275 NAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVG 334
N V + SP G++ S++ + D G+ + W V + SPDG LL
Sbjct: 629 NVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDW-VRAVAFSPDGALLASGS 687
Query: 335 DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 386
D+ L D + +L GH + + A+HP G T A+ ++D T RIW +
Sbjct: 688 DDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 360 SFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE 419
+ A A+ P G A G+ DK +WD+ + E + L+G+ +R++ ++ DG +A+
Sbjct: 462 AVAVAFSPGGSLLAGGSGDKLIHVWDVASGDE-LHTLEGHTDWVRAVAFSPDGALLASGS 520
Query: 420 PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
V ++DV + E+ + I+FSPD + G D T
Sbjct: 521 DDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGT 566
>sp|Q9USR0|CKN1_SCHPO DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ckn1 PE=1 SV=1
Length = 404
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 289 FTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVG--DNPDGLLVDSMT 346
FT+S+ D ++ +D+ Q + F + + SP +I + L D +
Sbjct: 119 FTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHCLIATAYRSSSIRLCDMQS 178
Query: 347 GKTIASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLK-------- 397
G SL GH A W P N A+G+ D TCR+WD+R +S S A +
Sbjct: 179 GSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPS 238
Query: 398 -----GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEI 445
+ G + + +TSD RY+A+ D + V++++SG +E FG I
Sbjct: 239 NQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLRE---FGPI 288
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 277 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKH---FRFPWP-------VNHSSQSPD 326
+++ G P+ +S+ D ++ F++G QL+K R W VN S D
Sbjct: 421 LDVNGYPT---FLASSSQDRTLKRFNLGS-QLNKSDFSNRAVWTIKAHDRDVNAIQVSKD 476
Query: 327 GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 386
G+++ + L DS TG+ + L GH +A +++P A+G+ D+T RIW++
Sbjct: 477 GRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNV 536
Query: 387 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 432
+ + V L+G+ GAI + Y S G + +A V V+ + SG
Sbjct: 537 -DTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG 581
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 347 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI 406
G I++LC F H N A+G D R+WDL N S S+AV +G+ IR +
Sbjct: 145 GGVISALC------FGK--HQNTWVLASGADDSRVRLWDL-NSSRSMAVFEGHSSVIRGL 195
Query: 407 RYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF---SPDTESLF----- 458
+ G ++ + V V+++K + I F + I + P+ + L+
Sbjct: 196 TFEPTGSFLLSGSRDKTVQVWNIKK-RSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEG 254
Query: 459 --IGVWDRTYGSLLEYGRCRNYSYLDSLI 485
I WD GS L+ G +S +++I
Sbjct: 255 NLILAWDWKSGSRLDPGVDTTHSETNAII 283
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS--ESVAVLKG 398
L D + +++A GH + P G +G++DKT ++W+++ S ++ V
Sbjct: 173 LWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFH- 231
Query: 399 NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 440
++ AI + + + + TA + + +D KSG + +D
Sbjct: 232 SVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVD 273
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR---NLSESVAVLKGNLGAIRSI 406
L GH D +GV ATG +D T R+W+L N+ + + V G+ ++ ++
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAV 416
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L D K + +L GH + +HP G FA+G+ D +IWD+R + KG+
Sbjct: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG-CIHTYKGHT 143
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 460
+ +R+T DGR++ + + V V+D+ +G + G+I + F P L G
Sbjct: 144 RGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203
Query: 461 VWDRT 465
DRT
Sbjct: 204 SADRT 208
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
+PDG+ ++ G++ + D GK + H + +HP+ ATG+ D+T +
Sbjct: 152 TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKF 211
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYM 415
WDL E + +R + + DG+ +
Sbjct: 212 WDLETF-ELIGSGGPETAGVRCLSFNPDGKTV 242
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Query: 350 IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYT 409
I SL GH + + + V A G T ++WDL ++ V L G+ S+ +
Sbjct: 52 ILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE-AKIVRTLTGHRSNCISVDFH 110
Query: 410 SDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS---FSPD-------TESLFI 459
G + A+ + ++D++ +K + G G++ F+PD E +
Sbjct: 111 PFGEFFASGSLDTNLKIWDIR---KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 460 GVWDRTYGSLL 470
VWD T G LL
Sbjct: 168 KVWDLTAGKLL 178
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDGK++ + L DS +G I SL H D ++ ++P+G A+ + DKT ++
Sbjct: 1497 SPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKL 1556
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
W + + G+ + S ++ DGRY+A+A V ++ + G
Sbjct: 1557 WRSHD-GHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAG 1615
Query: 444 EISGISFSPDTESLFIGVWDRT 465
+S I FSPD ++L G D T
Sbjct: 1616 VMSAI-FSPDGKTLISGSLDTT 1636
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 326 DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWD 385
DG ++ G + + L S G + +L G+ + ++ P G A+ N DKT +IW
Sbjct: 1374 DGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAI-YGISFTPQGDLIASANADKTVKIWR 1432
Query: 386 LRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEI 445
+R+ +++ L G+ + + ++ DG+ +A+A + V +++V G K+ E+
Sbjct: 1433 VRD-GKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEV 1491
Query: 446 SGISFSPDTESLF-------IGVWDRTYGSLLE 471
+SFSPD + + I +WD G+L++
Sbjct: 1492 FWVSFSPDGKIIASASADKTIRLWDSFSGNLIK 1524
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
VN+ SPDGK L + L D+ +G+ + +L GH + P+G T A G++
Sbjct: 1158 VNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSE 1217
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 437
DKT ++W R + + L G+ + S+ ++ DG+ +A+A + ++ + G +
Sbjct: 1218 DKTVKLWH-RQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKT 1276
Query: 438 EIDFFGEISGISFSPDTESLF-------IGVWDR 464
+ ++FS D +++ I +W+R
Sbjct: 1277 LKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNR 1310
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 344 SMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAI 403
S G+ +L GH D ++ ++ P+G T A+G DKT ++W + + + G+ +
Sbjct: 1100 SRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSD-GTLLKTITGHEQTV 1158
Query: 404 RSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG--- 460
++ ++ DG+ +A+A + ++D SG + + FSPD +++ G
Sbjct: 1159 NNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSED 1218
Query: 461 ----VWDRTYGSLLE 471
+W R G LL+
Sbjct: 1219 KTVKLWHRQDGKLLK 1233
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
VN + SPDGK L + L + GK +L GH D F ++ P+G A+ +
Sbjct: 1449 VNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASA 1508
Query: 378 DKTCRIWD--LRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEK 435
DKT R+WD NL +S L + + S+ + DG +A+ V ++ G+
Sbjct: 1509 DKTIRLWDSFSGNLIKS---LPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLL 1565
Query: 436 EQEIDFFGEISGISFSPD 453
+ SFSPD
Sbjct: 1566 HTFSGHSNVVYSSSFSPD 1583
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
L GH D + + +G T A+G+ DKT ++W R+ L G+ A+ S+ ++ DG
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWS-RD-GRLFRTLNGHEDAVYSVSFSPDG 1125
Query: 413 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWDRT 465
+ +A+ + ++ G + ++ + FSPD ++L I +WD T
Sbjct: 1126 QTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTT 1185
Query: 466 YGSLL 470
G LL
Sbjct: 1186 SGQLL 1190
Score = 39.7 bits (91), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
VN S SPDGK L + L GK + +L GH D + + +G A+ ++
Sbjct: 1242 VNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASR 1301
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 427
D T ++W+ + + G+ G + ++ + D +A+A + + ++
Sbjct: 1302 DNTIKLWNRHGI--ELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLW 1349
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
GHL+ ++HPNG TG+ DKTCR+WD+ + +SV + G+ + SI DG
Sbjct: 605 FAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV-STGDSVRLFLGHTAPVISIAVCPDG 663
Query: 413 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGE--ISGISFSPDTESLFIGVWDRT 465
R+++T ++V+D+ +G ++ +++ G+ I +S+S + L G D T
Sbjct: 664 RWLSTGSEDGIINVWDIGTG-KRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHT 717
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 321 SSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKT 380
+S SPD K L+ ++ L T + S GH + ++ P G FAT + D+T
Sbjct: 531 TSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQT 590
Query: 381 CRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 440
R+W ++ + + G+L + + + +G Y+ T ++DV +G +
Sbjct: 591 ARLWSCDHIY-PLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLG 649
Query: 441 FFGEISGISFSPD-------TESLFIGVWDRTYGSLLEYGR 474
+ I+ PD +E I VWD G L+ R
Sbjct: 650 HTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMR 690
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 349 TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRY 408
T +L GH +++++ P+ +G++DKT R+W + + ++ KG+ + + +
Sbjct: 517 TCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSM-DTHTALVSYKGHNHPVWDVSF 575
Query: 409 TSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
+ G Y ATA ++ Y ++ +SF P+ +F G D+T
Sbjct: 576 SPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKT 632
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 283 PSGAVHFTASNND-CGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLL 341
P+G FT S++ C + D G + PV + PDG+ L + DG++
Sbjct: 619 PNGCYVFTGSSDKTCRMWDVSTGD-SVRLFLGHTAPVISIAVCPDGRWLSTGSE--DGII 675
Query: 342 V--DSMTGKTIASLCGH-LDFSFASAWHPNGVTFATGNQDKTCRIWDLR 387
D TGK + + GH + ++ ++ G +G D T R+WDL+
Sbjct: 676 NVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 330 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 388
LI+ G + V D K + +L GH + +HP G A+G+QD ++WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 389 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 448
V +G+ A+R +R++ DG+++A+A V ++D+ +G + G ++ +
Sbjct: 137 -KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 449 SFSPDTESLFIGVWDRT 465
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSSDRT 212
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 54/272 (19%)
Query: 205 VLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCS 264
+++++GH +P E L ++L+VAG G + L+ +
Sbjct: 56 IMSLTGHTSPVES--------------VRLNTPEELIVAGSQSGSIRVWDLEAAKIL--- 98
Query: 265 RTTYDDNAITNAVEIYGSPSGAVHFTAS-NNDCGVRDFDM----------GKYQLSKHFR 313
RT A +++ + P G F AS + D ++ +D+ G Q + R
Sbjct: 99 RTLMGHKANICSLDFH--PYG--EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 314 FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFA 373
F SPDGK L D+ L D GK ++ GH +HPN A
Sbjct: 155 F---------SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLA 205
Query: 374 TGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 433
+G+ D+T R WDL + V+ ++G G +RS+ + DG + + D + VY G+
Sbjct: 206 SGSSDRTIRFWDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCLYSGC-QDSLRVY----GW 259
Query: 434 EKEQEIDF----FGEISGISFSPDTESLFIGV 461
E E+ D +G+++ ++ D IGV
Sbjct: 260 EPERCFDVVLVNWGKVADLAICNDQ---LIGV 288
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 330 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 388
LI+ G + V D K + +L GH + +HP G A+G+QD ++WD+R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 389 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 448
V +G+ A+R +R++ DG+++A+A V ++D+ +G + G ++ +
Sbjct: 137 -KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 449 SFSPDTESLFIGVWDRT 465
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSSDRT 212
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 54/272 (19%)
Query: 205 VLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCS 264
+++++GH +P E L ++L+VAG G + L+ +
Sbjct: 56 IMSLTGHTSPVES--------------VRLNTPEELIVAGSQSGSIRVWDLEAAKIL--- 98
Query: 265 RTTYDDNAITNAVEIYGSPSGAVHFTAS-NNDCGVRDFDM----------GKYQLSKHFR 313
RT A +++ + P G F AS + D ++ +D+ G Q + R
Sbjct: 99 RTLMGHKANICSLDFH--PYG--EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 314 FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFA 373
F SPDGK L D+ L D GK ++ GH +HPN A
Sbjct: 155 F---------SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLA 205
Query: 374 TGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 433
+G+ D+T R WDL + V+ ++G G +RS+ + DG + + D + VY G+
Sbjct: 206 SGSSDRTIRFWDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCLYSGC-QDSLRVY----GW 259
Query: 434 EKEQEIDF----FGEISGISFSPDTESLFIGV 461
E E+ D +G+++ ++ D IGV
Sbjct: 260 EPERCFDVVLVNWGKVADLAICNDQ---LIGV 288
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SP+G L+ V + L D +GKT+A L GH W P+G T + D T R+
Sbjct: 1556 SPEGNLIATVSADHTARLWDR-SGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARL 1614
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 431
WDL + L+G+ +RS ++ DGR++ T+ ++ VK+
Sbjct: 1615 WDLS--GRELLTLEGHGNWVRSAEFSPDGRWVLTSSADGTAKLWPVKT 1660
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 282 SPSGAVHFTASNNDCGVRDFDMGK---YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPD 338
S G FT S D R +D+ + L+ H + V ++ +P G L+ V +
Sbjct: 1310 SADGRFVFTVSA-DQTARQWDISQKDTITLTGHSHW---VRNAHFNPKGDRLLTVSRDKT 1365
Query: 339 GLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG 398
L + G+ +A L H + + P+G TG+ DKT ++W++ L + + VL+G
Sbjct: 1366 ARLW-TTEGECVAVLADHQGWVREGQFSPDGQWIVTGSADKTAQLWNV--LGKKLTVLRG 1422
Query: 399 NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLF 458
+ A+ ++R++ D +Y+ TA V++ +G E + I FS D + +
Sbjct: 1423 HQDAVLNVRFSPDSQYIVTASKDGTARVWN-NTGRELAVLRHYEKNIFAAEFSADGQFIV 1481
Query: 459 IGVWDRTYGSL----LEYGRCRNY 478
D T G E G CR +
Sbjct: 1482 TASDDNTAGIWEIVGREVGICRGH 1505
Score = 51.6 bits (122), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 317 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
PV + S D + ++ + + D + G+ + +L GH + + + P G AT +
Sbjct: 1508 PVYFAQFSADSRYILTASVDNTARIWDFL-GRPLLTLAGHQSIVYQARFSPEGNLIATVS 1566
Query: 377 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE 436
D T R+WD ++VAVL G+ G + ++ ++ DG+ + TA ++D+ SG E
Sbjct: 1567 ADHTARLWD--RSGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDL-SGRELL 1623
Query: 437 QEIDFFGEISGISFSPD 453
+ FSPD
Sbjct: 1624 TLEGHGNWVRSAEFSPD 1640
Score = 44.7 bits (104), Expect = 0.002, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
V ++ SPDG+ ++ + L D ++ + A L GH ++ + W P+G T +
Sbjct: 1181 VRNAQFSPDGQWIVTCSADGTARLWD-LSSQCFAVLKGHQNWVNNALWSPDGQHIITSSS 1239
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMAT 417
D T R+W + + L+G+ I R++ DG+ + T
Sbjct: 1240 DGTARVWSRH--GKCLGTLRGHDHNIHGARFSLDGQKIVT 1277
Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 344 SMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAI 403
S G+ I L GH + A W +G FAT + D T ++W + E VA L+G+ +
Sbjct: 1042 SFHGELINVLRGHQEAITALDWSADGQYFATASADHTVKLW--QRHGEEVATLRGHEDWV 1099
Query: 404 RSIRYTSDGRYMATA 418
RS+ ++ +++ T+
Sbjct: 1100 RSVHFSPHHQFLVTS 1114
Score = 42.7 bits (99), Expect = 0.006, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SP + L+ G + + + + G+ + GH D+ + ++ +G T ++D T R+
Sbjct: 1105 SPHHQFLVTSGQD-NTARIWNFAGEQLTLCQGHADWVRNAEFNCHGQILLTASRDGTARL 1163
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS-------GYEKE 436
WDL + + +G+ +R+ +++ DG+++ T ++D+ S G++
Sbjct: 1164 WDLE--GREIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVLKGHQN- 1220
Query: 437 QEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRC 475
++ +SPD + + D T +G+C
Sbjct: 1221 -------WVNNALWSPDGQHIITSSSDGTARVWSRHGKC 1252
Score = 42.4 bits (98), Expect = 0.008, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 324 SPDGKLLIIVGDNPDGLL-VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCR 382
SPD + IV + DG V + TG+ +A L + FA+ + +G T + D T
Sbjct: 1433 SPDSQY--IVTASKDGTARVWNNTGRELAVLRHYEKNIFAAEFSADGQFIVTASDDNTAG 1490
Query: 383 IWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYD 428
IW++ + V + +G+ G + ++++D RY+ TA + ++D
Sbjct: 1491 IWEI--VGREVGICRGHEGPVYFAQFSADSRYILTASVDNTARIWD 1534
Score = 40.0 bits (92), Expect = 0.040, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 12/162 (7%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLL-VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
VN++ SPDG+ I+ + DG V S GK + +L GH + + +G T +
Sbjct: 1222 VNNALWSPDGQH--IITSSSDGTARVWSRHGKCLGTLRGHDHNIHGARFSLDGQKIVTYS 1279
Query: 377 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE 436
D T R+W + +L+G+ + +++DGR++ T +D+ ++
Sbjct: 1280 TDNTARLWTKE--GTLLTILRGHQKEVYDADFSADGRFVFTVSADQTARQWDI----SQK 1333
Query: 437 QEIDFFGE---ISGISFSPDTESLFIGVWDRTYGSLLEYGRC 475
I G + F+P + L D+T G C
Sbjct: 1334 DTITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARLWTTEGEC 1375
Score = 40.0 bits (92), Expect = 0.043, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 347 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI 406
G+ +A+L GH D+ + + P+ T QD T RIW+ E + + +G+ +R+
Sbjct: 1086 GEEVATLRGHEDWVRSVHFSPHHQFLVTSGQDNTARIWNFA--GEQLTLCQGHADWVRNA 1143
Query: 407 RYTSDGRYMATAEPADFVHVYDVK 430
+ G+ + TA ++D++
Sbjct: 1144 EFNCHGQILLTASRDGTARLWDLE 1167
Score = 40.0 bits (92), Expect = 0.044, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG++L+ ++ L D ++G+ + +L GH ++ ++ + P+G T + D T ++
Sbjct: 1597 SPDGQMLVTASNDGTARLWD-LSGRELLTLEGHGNWVRSAEFSPDGRWVLTSSADGTAKL 1655
Query: 384 WDLRNLSE 391
W ++ L +
Sbjct: 1656 WPVKTLPQ 1663
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 330 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 388
LI+ G L V D K + +L GH + +HP G A+G+ D ++WD+R
Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRR 136
Query: 389 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 448
V KG+ A+R +R++ DG+++A+A V ++D+ +G + + G ++ I
Sbjct: 137 -KGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 449 SFSPDTESLFIGVWDRT 465
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSADRT 212
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 304 GKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFAS 363
G Q + RF SPDGK L D+ L D GK +A L H
Sbjct: 145 GHTQAVRCLRF---------SPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 364 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADF 423
+HPN A+G+ D+T R WDL + + +G +R+I ++SDG + D
Sbjct: 196 EFHPNEYLLASGSADRTVRFWDLEKF-QLIGCTEGETIPVRAILFSSDGGCIFCGG-RDA 253
Query: 424 VHVYDVKSGYEKEQEID 440
+ VY G+E +Q D
Sbjct: 254 LRVY----GWEPDQCFD 266
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 330 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 388
LI+ G L + D K + +L GH + +HP G A+G+ D ++WD+R
Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRR 136
Query: 389 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 448
V KG+ A+R +R++ DG+++A+A V ++D+ +G + + G ++ I
Sbjct: 137 -KGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 449 SFSPDTESLFIGVWDRT 465
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSADRT 212
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 304 GKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFAS 363
G Q + RF SPDGK L D+ L D GK +A L H
Sbjct: 145 GHTQAVRCLRF---------SPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 364 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADF 423
+HPN A+G+ D+T R WDL + V +G +R+I +++DG + D
Sbjct: 196 EFHPNEYLLASGSADRTVRFWDLEKF-QLVGCTEGETIPVRAILFSNDGGCIFCGG-KDS 253
Query: 424 VHVYDVKSGYEKEQEIDF----FGEISGISF 450
+ VY G+E +Q D +G++S ++
Sbjct: 254 LRVY----GWEPDQCFDTVPVGWGKVSDLAI 280
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 325 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 384
PDG L+ G++ G + D +GK+I L H+ A AW PNG AT + D T +IW
Sbjct: 317 PDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIW 376
Query: 385 DLRNLSESVAVLKGNLGAIRSIRYTSDG--RYMATA 418
DLR +S + + + + +RY G R++AT+
Sbjct: 377 DLRKVSLA-HTIPAHSSLVSDVRYIESGVNRFIATS 411
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 325 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 384
P G L+ + L D TG + GH + F+ A P+G ++G D RIW
Sbjct: 275 PSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIW 334
Query: 385 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 430
DLR+ +S+ VL ++ I ++ ++ +G +AT+ D V ++D++
Sbjct: 335 DLRS-GKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLR 379
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
L GHL A+HP+G + + D T R+WD+ E + + +G+ I SI DG
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVE-LLMQEGHSEGIFSIACQPDG 319
Query: 413 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWDRT 465
+++ ++D++SG + +I +++SP+ L + +WD
Sbjct: 320 SLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLR 379
Query: 466 YGSL 469
SL
Sbjct: 380 KVSL 383
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 355 GHLDFSFASAWHP---------NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 405
GH D W+P +T ATG D T +W S + L+G+L +
Sbjct: 212 GHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQ-STPLLRLEGHLARVGR 270
Query: 406 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 453
+ + G Y+ +A ++DV +G E + I I+ PD
Sbjct: 271 VAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPD 318
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
GHL + +HPN ATG+ D+T R+WD+ N V + G+ G I S+ ++ +G
Sbjct: 624 FAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSPNG 682
Query: 413 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
R++AT V ++D+ G + + + FS D E L G D T
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 735
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L D + G + GH + + PNG ATG D +WD+ + V LKG+
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH-GLMVGELKGHT 712
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 460
+ S+R++ DG +A+ + V ++D +E + DF I+ +++ L +G
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLG 772
Query: 461 VW 462
+
Sbjct: 773 TY 774
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 317 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
PV +S SPD L+ ++ L T + GH + + + P G F +G
Sbjct: 546 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 605
Query: 377 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE 436
D+ R+W + + + + G+L + RY + Y+AT V ++DV +G
Sbjct: 606 HDRVARLWATDHY-QPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR 664
Query: 437 QEIDFFGEISGISFSPDTESLFIG-------VWDRTYGSLL 470
G I ++FSP+ L G +WD +G ++
Sbjct: 665 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMV 705
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 317 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
P++ + SP+G+ L + LL D G + L GH D + + +G A+G+
Sbjct: 672 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 731
Query: 377 QDKTCRIWDLRNLSESV-----AVLKGNLGAIRSIRYTSDGRYMATAEPADFVH 425
D T R+WD E + G++ + + G YM + P +H
Sbjct: 732 MDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLH 785
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 355 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 414
GHL +HPN ATG+ DKT R+W + SV + G+ G + S+ ++ +G+Y
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSPNGKY 482
Query: 415 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT 454
+A+A + ++D+ SG ++ I+ ++FSPD+
Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS 522
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 317 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
PV + SP+GK L G++ L D +G L GH D + + P+ A+ +
Sbjct: 470 PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASAS 529
Query: 377 QDKTCRIWDLRNL----------SESVAVLKGNLGAIRSIRYTSDGRYMAT 417
D + R+WD+RN SE V V G + + S+++ + + T
Sbjct: 530 MDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVT 580
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L + G ++ GH + A+ PNG A+ +D+ ++WDL + L+G+
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS-GTLYKELRGHT 510
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 433
I S+ ++ D +A+A + V V+D+++ Y
Sbjct: 511 DNITSLTFSPDSGLIASASMDNSVRVWDIRNTY 543
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 367 PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHV 426
P + FA+G+ D+T R+W + + + + G+L + +++ + Y+AT V +
Sbjct: 394 PYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 427 YDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWDRTYGSL 469
+ + G G + ++FSP+ + L + +WD G+L
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
GHL + +HPN ATG+ D+T R+WD+ N V + G+ G I S+ ++ +G
Sbjct: 623 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSPNG 681
Query: 413 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
R++AT V ++D+ G + + + FS D E L G D T
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 734
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L D + G + GH + + PNG ATG D +WD+ + V LKG+
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH-GLMVGELKGHT 711
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 460
+ S+R++ DG +A+ + V ++D +E + DF I+ +++ L +G
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLG 771
Query: 461 VW 462
+
Sbjct: 772 TY 773
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 317 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
PV +S SPD L+ ++ L T + GH + + + P G F +G
Sbjct: 545 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 604
Query: 377 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE 436
D+ R+W + + + + G+L + R+ + Y+AT V ++DV +G
Sbjct: 605 HDRVARLWATDHY-QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
Query: 437 QEIDFFGEISGISFSPDTESLFIG-------VWDRTYGSLL 470
G I ++FSP+ L G +WD +G ++
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMV 704
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 317 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
P++ + SP+G+ L + LL D G + L GH D + + +G A+G+
Sbjct: 671 PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 730
Query: 377 QDKTCRIWDLRNLSESV-----AVLKGNLGAIRSIRYTSDGRYMATAEPADFVH 425
D T R+WD E + G++ + + G YM + P +H
Sbjct: 731 MDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLH 784
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG+L++ D+ L D + + I S C H F +HP+G A D T ++
Sbjct: 153 SPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKV 212
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD+R +++ + + + G + S+ + G Y+ TA + V D+ G G
Sbjct: 213 WDIR-MNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQG 271
Query: 444 EISGISFSPDTESLFIG-------VWDR-----TYGSLLEY 472
++ + FS + E G VW +Y LL+Y
Sbjct: 272 PVTSVKFSREGEFFASGGSDEQVMVWKTNFDSASYADLLKY 312
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
GH D + + P+G A+ ++DKT R+W ES V K + G +RS+ ++ DG
Sbjct: 56 FVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGEST-VFKAHTGTVRSVSFSGDG 114
Query: 413 RYMATAEPADFVHVYDV---KSGYEKEQEIDFFGEISGISFSPD-------TESLFIGVW 462
+ + TA + V+ V K + Q I++ + FSPD ++ I +W
Sbjct: 115 QSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---VRCAKFSPDGRLIVSASDDKTIKLW 171
Query: 463 DRT----YGSLLEYGRCRNY 478
D+T S E+G N+
Sbjct: 172 DKTSRECIHSFCEHGGFVNF 191
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
S DG+ L+ D+ + K + SL H+++ + + P+G + + DKT ++
Sbjct: 111 SGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKL 170
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD + E + + G + + + G +A A + V V+D++ + G
Sbjct: 171 WD-KTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSG 229
Query: 444 EISGISFSPDTESLFIGVWDRTYGSL-LEYGR 474
++ +SF P L D T L L GR
Sbjct: 230 VVNSLSFHPSGNYLITASNDSTLKVLDLLEGR 261
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 355 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 414
GH D ++PN A+G+ D IW+++ + + G+ AI S+ ++ G
Sbjct: 16 GHRDTVTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFV-GHKDAILSVDFSPSGHL 74
Query: 415 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
+A+A V ++ E G + +SFS D +SL D+T
Sbjct: 75 IASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKT 125
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 355 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 414
GHL +HPN ATG+ DKT R+W + SV + G+ G + S+ ++ +G+Y
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLSFSPNGKY 482
Query: 415 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT 454
+A+A + ++D+ SG ++ I+ ++FSPD+
Sbjct: 483 LASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDS 522
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 317 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
PV S SP+GK L G++ L D +G L GH D + A+ P+ A+ +
Sbjct: 470 PVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASAS 529
Query: 377 QDKTCRIWDLRNL----------SESVAVLKGNLGAIRSIRYTSDGRYMAT 417
D + R+WD+R+ E V V G + + S+++ + + T
Sbjct: 530 MDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVT 580
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 367 PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHV 426
P + FA+G+ D+T R+W + + + + G+L + +++ + Y+AT V +
Sbjct: 394 PFSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 427 YDVKSGYEKEQEIDFFGEISGISFSPDTESLF-------IGVWDRTYGSLLEYGR 474
+ + G G + +SFSP+ + L + +WD G+L + R
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR 507
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L + G ++ GH + ++ PNG A+ +D+ ++WDL + L+G+
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS-GTLFKELRGHT 510
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 448
+I S+ ++ D +A+A + V V+D++S GE+ G+
Sbjct: 511 DSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV 558
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 330 LIIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 388
L++ G + + D K + +L GH + +HP G A+G+ D ++WD+R
Sbjct: 73 LVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRR 132
Query: 389 LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 448
+ KG+ + I+++ DG+++ TA + ++D+ G ++ + G ++GI
Sbjct: 133 KG-CIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGI 191
Query: 449 SFSPDTESLFIGVWDRT 465
F P+ L G DRT
Sbjct: 192 EFHPNEFLLASGSSDRT 208
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
VN SPDGK L+ ++ L D GK H +HPN A+G+
Sbjct: 146 VNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSS 205
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 437
D+T + WDL + V+ A+RSI + DG Y+ + D +H + G+E +
Sbjct: 206 DRTVQFWDLETF-QLVSSTSPGASAVRSISFHPDGSYLFCSS-QDMLHAF----GWEPIR 259
Query: 438 EIDFF 442
D F
Sbjct: 260 CFDTF 264
>sp|Q7PS24|CIAO1_ANOGA Probable cytosolic iron-sulfur protein assembly protein Ciao1
OS=Anopheles gambiae GN=Ciao1 PE=3 SV=3
Length = 341
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 350 IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVA---VLKGNLGAIRSI 406
+ +L GH +++AWHP G FA+ +DKT R+W+ + VA + G+ IR +
Sbjct: 7 LQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIREL 66
Query: 407 RYTSDGRYMATAEPADFVHVYDVKSG 432
++ G Y+A+A V V+D KSG
Sbjct: 67 AWSCCGHYLASASFDTTVAVWDKKSG 92
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 306 YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAW 365
+ L++H + V + SPDG+L++ D+ L D + + I S C H F +
Sbjct: 138 FSLNQHINW---VRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDF 194
Query: 366 HPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVH 425
HP+G A D T ++WD+R +++ + + + G + S+ + G Y+ TA +
Sbjct: 195 HPSGTCIAAAATDNTVKVWDIR-MNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLK 253
Query: 426 VYDVKSG 432
V D+ G
Sbjct: 254 VLDLLEG 260
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 353 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 412
GH D + + P+G A+ ++DKT R+W ES A K + G +RS+ ++ DG
Sbjct: 56 FVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTA-FKAHTGTVRSVSFSGDG 114
Query: 413 RYMATAEPADFVHVYDV---KSGYEKEQEIDFFGEISGISFSPD-------TESLFIGVW 462
+ + TA + V+ V K + Q I++ + FSPD ++ I +W
Sbjct: 115 QSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---VRCAKFSPDGRLIVSASDDKTIKLW 171
Query: 463 DRT----YGSLLEYGRCRNY 478
D+T S E+G N+
Sbjct: 172 DKTSRECIQSFCEHGGFVNF 191
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
S DG+ L+ D+ + K + SL H+++ + + P+G + + DKT ++
Sbjct: 111 SGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKL 170
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD + E + + G + + + G +A A + V V+D++ + G
Sbjct: 171 WD-KTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSG 229
Query: 444 EISGISFSPDTESLFIGVWDRTYGSL-LEYGR 474
++ +SF P L D T L L GR
Sbjct: 230 VVNSLSFHPSGNYLITASNDSTLKVLDLLEGR 261
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 7/161 (4%)
Query: 263 CSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF-PWPVNHS 321
C ++ + N V+ + PSG A+ D V+ +D+ +L +H++ VN
Sbjct: 178 CIQSFCEHGGFVNFVDFH--PSGTC-IAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSL 234
Query: 322 SQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 381
S P G LI ++ ++D + G+ + +L GH + G FA+G D+
Sbjct: 235 SFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFASGGSDEQV 294
Query: 382 RIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD 422
+W + S L L ++ + S G Y + +PAD
Sbjct: 295 MVWKTNFDAGSYPDL---LKYRQNDTFPSGGDYTSIVQPAD 332
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 355 GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 414
GH D A ++ N A+G+ D +W+++ + + G+ AI S+ ++ G
Sbjct: 16 GHRDTVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFV-GHKDAILSVDFSPSGHL 74
Query: 415 MATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
+A+A V ++ E G + +SFS D +SL D+T
Sbjct: 75 IASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKT 125
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
+N S S + + + D+ + D ++G + ++ GH ++ F +++P A+
Sbjct: 258 INDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGF 317
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 437
D+T R+WD + V + + I SI Y DG MAT+ + V+D SG +
Sbjct: 318 DETVRVWDFKT-GLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKT 376
Query: 438 EIDF-FGEISGISFSPDTESLF-------IGVWDRTYGSLLEY 472
+D ++ + FSP+ + L + +WD L+Y
Sbjct: 377 LVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKY 419
>sp|A8IZG4|CIAO1_CHLRE Probable cytosolic iron-sulfur protein assembly protein CIAO1
homolog OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_130093 PE=3 SV=1
Length = 352
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 342 VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES-----VAVL 396
+D T + I +L GH D + AW P G A+ + DKT RIW R S A+L
Sbjct: 1 MDPFTLEPIGALSGHDDRVWNVAWSPQGDMLASCSGDKTVRIWSRRQPRPSEQWYCSAIL 60
Query: 397 -KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG-YEKEQEIDFF-GEISGISFSPD 453
+ + IRS+ ++ GR +ATA V V+++ SG +E+ E++ E+ ++++PD
Sbjct: 61 DQCHTRTIRSVAWSPTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPD 120
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 364 AWHPNGVTFATGNQDKTCRIWDLRN-LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD 422
AW P G AT + D T +W+L + + E VA L+G+ ++ + + DGR +AT
Sbjct: 72 AWSPTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRLIATCGRDR 131
Query: 423 FVHVYDVKSGYEKE 436
V +++ G E E
Sbjct: 132 SVWIWESMPGREFE 145
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTG--KTIASLCGHLDFSFASAWHPNGVTFATG 375
+ + SP G+ L + + + +G + +A L GH + AW+P+G AT
Sbjct: 68 IRSVAWSPTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRLIATC 127
Query: 376 NQDKTCRIWDL---RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 427
+D++ IW+ R E V V +G+ ++++ + G + +A D + ++
Sbjct: 128 GRDRSVWIWESMPGREF-ECVDVKQGHSQDVKAVTWHPSGELLVSAGYDDTIKLW 181
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 346 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 405
TGK + GH +++P ATG+ D T ++WD+++ E V L G+L I S
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQS-GEEVVTLTGHLAEIIS 224
Query: 406 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
+ + + G + T V V+D +G + I EIS FS D + G D+T
Sbjct: 225 LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKT 284
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 331 IIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL 389
II G ++V D+ TG+ + +L GH ++ + + TG+ DKTC +WD +
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS- 292
Query: 390 SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 449
+ VA L G+ I + G+ +ATA VY+ + + GEIS IS
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS 352
Query: 450 FSPDTESLFIG-------VWDRTYGSLLE 471
F+P L G +WD G L+
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDVQTGQCLQ 381
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 343 DSMTGKTIASLCGHLDFSFASAWH-PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLG 401
D+ +G+ + +L GH + +A A++ P G ATG+ DKTC++W + +G+
Sbjct: 120 DTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAET-GKCYHTFRGHTA 178
Query: 402 AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGV 461
I + + +AT ++D++SG E EI +SF + + G
Sbjct: 179 EIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGS 238
Query: 462 WDRT 465
+D T
Sbjct: 239 FDHT 242
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 327 GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 386
GKL+ + + ++ T K I L GH +++P G TG+ DKT RIWD+
Sbjct: 315 GKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDV 374
Query: 387 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 427
+ + + VL+G+ I S + G + T + ++
Sbjct: 375 QT-GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
++ S +P G L+ + + D TG+ + L GH D F+ A++ G TG++
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSK 407
Query: 378 DKTCRIW 384
D +CRIW
Sbjct: 408 DNSCRIW 414
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 364 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD-GRYMATAEPAD 422
A + G F TG+ D+TC++WD + E + L+G+ + +I + + G +AT
Sbjct: 99 ALNKAGSCFITGSYDRTCKVWDTAS-GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 423 FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
++ ++G EI +SF+P + + G D T
Sbjct: 158 TCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTT 200
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 316 WPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG 375
+PV +P G + + L + + + + GHL +HPN ATG
Sbjct: 493 YPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATG 552
Query: 376 NQDKTCRIWDLRNLS-ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE 434
+ D+T R+WD N++ +SV ++ G+ G++ S+ +++ GRY+A+ + ++D+ +G
Sbjct: 553 SSDRTVRLWD--NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSL 610
Query: 435 KEQEIDFFGEISGISFSPD 453
+ ++ I+FS D
Sbjct: 611 VTTLLRHTSTVTTITFSRD 629
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 317 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 376
PV + +P+ LL+ ++ L +T + + GH+ + + P+G F + +
Sbjct: 452 PVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCS 511
Query: 377 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE 436
DKT R+W + ++++ V G+L + +++ + Y+AT V ++D +G
Sbjct: 512 YDKTARLW-ATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVR 570
Query: 437 QEIDFFGEISGISFSPDTESLFIG-------VWDRTYGSLL 470
G +S ++FS L G +WD + GSL+
Sbjct: 571 LMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLV 611
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
++D +G+ SL GH + A+ P + ++D T R+W L S V +G++
Sbjct: 434 MLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWS-CVVTYRGHV 492
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 460
+ +R+ G Y + ++ S + ++ + F P++ + G
Sbjct: 493 YPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATG 552
Query: 461 VWDRT 465
DRT
Sbjct: 553 SSDRT 557
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDGK L D+ L D + GK I H +HPN A+G+ D+T ++
Sbjct: 156 SPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKL 215
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-- 441
WDL + + +G G +RS+ + DG + + + + VY G+E ++ D
Sbjct: 216 WDLEKFN-MIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY----GWEPDRCFDVVH 269
Query: 442 --FGEISGISFS 451
+G++S ++ S
Sbjct: 270 VGWGKVSDLAIS 281
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L D K + +L GH + +HP G A+G+ D ++WD+R V KG+
Sbjct: 89 LWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRR-KGCVFRYKGHT 147
Query: 401 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG 460
A+R + ++ DG+++A+A V ++D+ +G + ++ + F P+ L G
Sbjct: 148 QAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASG 207
Query: 461 VWDRT 465
DRT
Sbjct: 208 SADRT 212
>sp|O74855|NLE1_SCHPO Ribosome assembly protein C18.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1
Length = 502
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
VNH+S SPDG+ + + L D TGK +A+L GH+ + AW + + +Q
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQ 451
Query: 378 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 427
D T ++WD+R+ L G+ + ++ ++ DG+ +A+ V ++
Sbjct: 452 DTTLKVWDVRSKKMKFD-LPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 327 GKLLIIVGDNPDGLLVDSM-TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWD 385
G+ L+ D+ +L D + K I + GH +++ P+G AT + D + R+WD
Sbjct: 358 GERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Query: 386 LRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG-- 443
+ + +A L+G++ A+ +++D R + ++ + V+DV+S K+ + D G
Sbjct: 418 GKT-GKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS---KKMKFDLPGHE 473
Query: 444 -EISGISFSPDTESLFIGVWDR 464
++ + +SPD + + G D+
Sbjct: 474 DQVFAVDWSPDGQRVASGGADK 495
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 341 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 400
L D T IA++ GH ++ AW P+ ATG+ D T R WD + S L+ +
Sbjct: 161 LWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHT 220
Query: 401 GAIRSIRYTS------DGRY-MATAEPADFVHVYDVK 430
I ++ + G Y +A+ + V +++VK
Sbjct: 221 KPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVK 257
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 336 NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVT-FATGNQDKTCRIWDLRNLSESVA 394
P + + AS+ GH ++ + P+ + TG+ D T R+WD + +A
Sbjct: 113 TPQAVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDC-DTQTPIA 171
Query: 395 VLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 432
+KG+ + + + D +AT + + +D K G
Sbjct: 172 TMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKG 209
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 365 WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFV 424
+HP+G+ F TG D +IWDL+N + + A G+ A+RSI ++ +G Y+AT V
Sbjct: 346 FHPDGLIFGTGAADAVVKIWDLKNQTVA-AAFPGHTAAVRSIAFSENGYYLATGSEDGEV 404
Query: 425 HVYDVKS-------GYEKEQEIDFFGEISGISFSPDTESLFIGV 461
++D++ E++Q I+ S S D F+G+
Sbjct: 405 KLWDLRKLKNLKTFANEEKQPIN--------SLSFDMTGTFLGI 440
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 346 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 405
TGK + GH +++P ATG+ D T ++WD++N E V L+G+ I S
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN-GEEVYTLRGHSAEIIS 224
Query: 406 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
+ + + G + T V V+D +G + I EIS SF+ D + G D+T
Sbjct: 225 LSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKT 284
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 331 IIVGDNPDGLLV-DSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL 389
II G ++V D+ TG+ + L GH +++++ + TG+ DKTC++WD N
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN- 292
Query: 390 SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 449
+ VA L G+ I + G+ +ATA ++ + + GEIS IS
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS 352
Query: 450 FSPDTESLFIG-------VWDRTYGSLLE 471
F+P L G +WD G L+
Sbjct: 353 FNPQGNHLLTGSSDKTARIWDAQTGQCLQ 381
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 318 VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 377
++ S +P G L+ + + D+ TG+ + L GH D F+ A++ G TG++
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSK 407
Query: 378 DKTCRIW 384
D TCRIW
Sbjct: 408 DNTCRIW 414
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 327 GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 386
GKL+ + + + T K IA L GH +++P G TG+ DKT RIWD
Sbjct: 315 GKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDA 374
Query: 387 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVY 427
+ + + VL+G+ I S + G + T + ++
Sbjct: 375 QT-GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 39.3 bits (90), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 364 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD-GRYMATAEPAD 422
A + +G F TG+ D+TC++WD + E + L+G+ + +I + + G +AT
Sbjct: 99 ALNKSGSCFITGSYDRTCKLWDTAS-GEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 423 FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
++ V++G EI +SF+P + + G D T
Sbjct: 158 TCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTT 200
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 277 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN 336
++I+G+ G T S + G+ D + S D LL+ D+
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDV--------------------AWSSDSNLLVSASDD 108
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 396
+ D +GK + +L GH ++ F ++P +G+ D++ RIWD++ + + L
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTL 167
Query: 397 KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG-EISGISFSPDTE 455
+ + ++ + DG + ++ ++D SG + ID +S + FSP+ +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 456 SLF-------IGVWDRTYGSLLEYGRC-RNYSY 480
+ + +WD + G L+ C +N Y
Sbjct: 228 YILAATLDNTLKLWDYSKGKCLKTYTCHKNEKY 260
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 352 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 411
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 412 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 464
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 465 TYGSLLE 471
G L+
Sbjct: 159 KTGKCLK 165
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 8/158 (5%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SP G + L D + GH + ++HPN ATG+ D T R+
Sbjct: 454 SPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRM 513
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD+R +V V + + ++ ++DG +A+A+ + + V+D++S + +
Sbjct: 514 WDVRT-GGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSS 572
Query: 444 EISGISFSPDTESLFIG-------VWDRTYGSLLEYGR 474
+ +SFS D + L G WD TY + L G
Sbjct: 573 IVYSLSFSYDNKILVSGGADTDVNFWDLTYRNNLSDGE 610
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 16/195 (8%)
Query: 281 GSPSGAVHFTASNND-----CGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGD 335
G ++H +S N+ G ++ + K L H R PV S SP + ++ +
Sbjct: 367 GCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTR---PVFGVSISPQKEFILSCSE 423
Query: 336 NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAV 395
+ L T TI GH + + P G FAT + D+T R+WD+ + + + V
Sbjct: 424 DGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEH-AAPLRV 482
Query: 396 LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE 455
G+ + + + + Y+AT ++DV++G +S + S D
Sbjct: 483 FVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGL 542
Query: 456 SL-------FIGVWD 463
SL I VWD
Sbjct: 543 SLASADESGIIKVWD 557
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 351 ASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTS 410
+SL GH F + P + ++D R+W ++ ++ G+ I ++++
Sbjct: 397 SSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWS-KDTKSTIVKYAGHNAPIWDVQFSP 455
Query: 411 DGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 465
G Y ATA ++DV+ + ++ +SF P+ L G D T
Sbjct: 456 FGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHT 510
>sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein
OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1
Length = 554
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 326 DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWD 385
DG L G + + D TG++I GH+ F+ + PNG A+G +D CRIWD
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Query: 386 LRNLSESVAVLKGNLGAIRSIRY-TSDGRYMATA 418
LR + +S+ ++ + + ++Y +G ++ATA
Sbjct: 452 LR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATA 484
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 347 GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI 406
G + + GHLD A+HP+G T + DKT R+WD+ N + + +G+ ++ I
Sbjct: 329 GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI-NTGAELLLQEGHSRSVYGI 387
Query: 407 RYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS---GISFSPDTESLFIG--- 460
+ DG A+ V+D+++G + F G I ++FSP+ L G
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTG---RSILVFQGHIKPVFSVNFSPNGYHLASGGED 444
Query: 461 ----VWD 463
+WD
Sbjct: 445 NQCRIWD 451
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 325 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 384
P GK L + L D TG + GH + A+ +G A+ D R+W
Sbjct: 349 PSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVW 408
Query: 385 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 430
DLR S+ V +G++ + S+ ++ +G ++A+ + ++D++
Sbjct: 409 DLRT-GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 3/138 (2%)
Query: 317 PVNHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG 375
P+ S S DGK+L L TIA L H + + + P AT
Sbjct: 257 PLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATA 316
Query: 376 NQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEK 435
+ D+T ++W + + +G+L + + + G+Y+ T ++D+ +G E
Sbjct: 317 SADRTAKLW--KTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Query: 436 EQEIDFFGEISGISFSPD 453
+ + GI+F D
Sbjct: 375 LLQEGHSRSVYGIAFQQD 392
>sp|P36408|GBB_DICDI Guanine nucleotide-binding protein subunit beta OS=Dictyostelium
discoideum GN=gpbA PE=1 SV=1
Length = 347
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 322 SQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 381
S SPD I + L D +GK + + GH A + PNG++F TG+ D +C
Sbjct: 198 SVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASC 257
Query: 382 RIWDLRNLSESVAVLKGN-LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 440
R++D+R E + N L I S+ ++ GR++ +V+D G
Sbjct: 258 RLFDIRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTG 317
Query: 441 FFGEISGISFSPDTESLFIGVWD 463
+S + D +L G WD
Sbjct: 318 HGNRVSCLGVPTDGMALCTGSWD 340
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 305 KYQLSKHFRFPWP---VNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSF 361
K L+K + W V+ S S DGKLL+ DGL + + + S +
Sbjct: 59 KGHLAKIYAMHWAEDNVHLVSASQDGKLLVW-----DGLTTNKVHAIPLRS-----SWVM 108
Query: 362 ASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAV---LKGNLGAIRSIRYTSDGRYMATA 418
A+ P A G D C I++LR+ + + V L + G + R+ +D R + T+
Sbjct: 109 TCAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLND-RQIVTS 167
Query: 419 EPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL-LEYGRC 475
++DV++G + + D G++ +S SPD G D T L G+C
Sbjct: 168 SGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKC 225
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 10/137 (7%)
Query: 340 LLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN 399
+L D G I H + + P+ F +G D T ++WDLR+ + V G+
Sbjct: 174 ILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRS-GKCVQTFTGH 232
Query: 400 LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI--DFFGEISGISFSPDTESL 457
I +++Y +G T ++D+++ E Q + I+ + FS L
Sbjct: 233 EADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRFL 292
Query: 458 FIG-------VWDRTYG 467
F G VWD G
Sbjct: 293 FAGYDDFTCNVWDTLKG 309
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 277 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN 336
++I+G+ G T S + G+ D + S D LL+ D+
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDV--------------------AWSSDSNLLVSASDD 108
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 396
+ D +GK + +L GH ++ F ++P +G+ D++ RIWD++ + + L
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTL 167
Query: 397 KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG-EISGISFSPDTE 455
+ + ++ + DG + ++ ++D SG + ID +S + FSP+ +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 456 SLFIGVWDRTYGSLLEY--GRC 475
+ D T L +Y G+C
Sbjct: 228 YILAATLDNTL-KLWDYSKGKC 248
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 352 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 411
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 412 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 464
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 465 TYGSLLE 471
G L+
Sbjct: 159 KTGKCLK 165
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 277 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN 336
++I+G+ G T S + G+ D + S D LL+ D+
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDV--------------------AWSSDSNLLVSASDD 108
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 396
+ D +GK + +L GH ++ F ++P +G+ D++ RIWD++ + + L
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTL 167
Query: 397 KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG-EISGISFSPDTE 455
+ + ++ + DG + ++ ++D SG + ID +S + FSP+ +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 456 SLFIGVWDRTYGSLLEY--GRC 475
+ D T L +Y G+C
Sbjct: 228 YILAATLDNTL-KLWDYSKGKC 248
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 352 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 411
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 412 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 464
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 465 TYGSLLE 471
G L+
Sbjct: 159 KTGKCLK 165
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 277 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN 336
++I+G+ G T S + G+ D + S D LL+ D+
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDV--------------------AWSSDSNLLVSASDD 108
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 396
+ D +GK + +L GH ++ F ++P +G+ D++ RIWD++ + + L
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTL 167
Query: 397 KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG-EISGISFSPDTE 455
+ + ++ + DG + ++ ++D SG + ID +S + FSP+ +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 456 SLFIGVWDRTYGSLLEY--GRC 475
+ D T L +Y G+C
Sbjct: 228 YILAATLDNTL-KLWDYSKGKC 248
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 352 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 411
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 412 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 464
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 465 TYGSLLE 471
G L+
Sbjct: 159 KTGKCLK 165
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
S D KL+ D+ + D +GK + +L GH ++ F +++P +G+ D+ RI
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 384 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 443
WD+ N E ++ + + + + DG + + V ++D +G Q ++
Sbjct: 157 WDV-NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTG----QLLNTIS 211
Query: 444 -----EISGISFSPDTESLFIGVWDRT 465
E+S + FSP+ + + G D T
Sbjct: 212 TEDGKEVSFVKFSPNGKFVLAGTLDNT 238
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 305 KYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASA 364
KY L H + ++ SPDGK L + + + GK +L GH + A
Sbjct: 39 KYTLKGHLK---SISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIA 95
Query: 365 WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFV 424
W + + + DKT +IWD+ + + V LKG+ + + + + + + V
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVES-GKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENV 154
Query: 425 HVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDRTYGSLL 470
++DV +G + ++G+ F+ D + G +WD T G LL
Sbjct: 155 RIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 277 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN 336
++I+G+ G T S + G+ D + S D +LL+ D+
Sbjct: 96 IKIWGAYDGKFEKTISGHKLGISDV--------------------AWSSDSRLLVSGSDD 135
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 396
+ + TGK++ +L GH ++ F ++P +G+ D++ RIWD+R + + L
Sbjct: 136 KTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-GKCLKTL 194
Query: 397 KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG-EISGISFSPDTE 455
+ + ++ + DG + ++ ++D SG + ID +S + FSP+ +
Sbjct: 195 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 254
Query: 456 SLFIGVWDRTYGSLLEY--GRC 475
+ D T L +Y G+C
Sbjct: 255 YILAATLDNTL-KLWDYSKGKC 275
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 352 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 411
+L GH A + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 125
Query: 412 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 464
R + + + V+++ +G + + +F+P + + G +WD
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 465 TYGSLLE 471
G L+
Sbjct: 186 RTGKCLK 192
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 277 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN 336
++I+G+ G T S + G+ D + S D LL+ D+
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDV--------------------AWSSDSNLLVSASDD 108
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 396
+ D +GK + +L GH ++ F ++P +G+ D++ RIWD++ + + L
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTL 167
Query: 397 KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG-EISGISFSPDTE 455
+ + ++ + DG + ++ ++D SG + ID +S + FSP+ +
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 456 SLFIGVWDRTYGSLLEY--GRC 475
+ D T L +Y G+C
Sbjct: 228 YILAATLDNTL-KLWDYSKGKC 248
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 352 SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSD 411
+L GH + + PNG A+ + DK +IW + + LG I + ++SD
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 412 GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-------VWDR 464
+ +A + ++DV SG + + +F+P + + G +WD
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 465 TYGSLLE 471
G L+
Sbjct: 159 KTGKCLK 165
>sp|P87229|YC03_SCHPO Uncharacterized protein C4G3.03 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC4G3.03 PE=4 SV=1
Length = 347
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 292 SNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVD-------S 344
S+ND ++ D+ L K FP +NH+S S DG+ ++ VGD+P +
Sbjct: 135 SSNDHTIKVVDLEHGLLRKQLHFPVNMNHASVSNDGRFMVCVGDSPQVFFYEIDRSGEYH 194
Query: 345 MTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL---- 400
+ T+A D SF ++ FA +QD + ++D+R L + +
Sbjct: 195 LRHTTVADT---TDSSFCTSISQRNELFAVASQDSSLSVFDVRYLRTPMLTKTSSRPDPN 251
Query: 401 GAIRSIRYTSDG----RYMATAEPADFVHVYDVKSGYEKE----QEIDFFG----EISGI 448
G+IRS +T + +E + H+ D+++G + E E FF +I G
Sbjct: 252 GSIRSCHFTPPNGGPLDLLLYSEGFSYSHLLDLRTGKDVELVLPSEDRFFSPASQDIFGS 311
Query: 449 SFSPDTESLFIG 460
F+ D S+++
Sbjct: 312 CFADDGSSVYVA 323
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 19/183 (10%)
Query: 277 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN 336
+I+ G FT N + G ++ V + SPDG+L+ +
Sbjct: 393 AKIWDIEKGKCAFTLGNEEVGPKNG----------------VTSVAMSPDGRLVAAGSLD 436
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL---RNLSESV 393
L D+ TG + GHLD ++ A+ P+G + A+G+ DK+ ++WDL R+ S
Sbjct: 437 NIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCR 496
Query: 394 AVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 453
A G+ + S+ ++ DG ++ + V +D ++G + ++ SP
Sbjct: 497 ATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPK 556
Query: 454 TES 456
S
Sbjct: 557 NNS 559
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDG L ++ + D T K + GH ++ + +G +G+ DK +I
Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKI 395
Query: 384 WDLRNLSESVAVLKGNLG---AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 440
WD+ + + +G + S+ + DGR +A + V ++D ++GY E+
Sbjct: 396 WDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEG 455
Query: 441 FFGEISGISFSPDTESLFIGVWDRT 465
+ ++FSPD +SL G D++
Sbjct: 456 HLDSVYSVAFSPDGKSLASGSLDKS 480
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 406 IRYTSDGRYMATAEPADFVHVYDVKSGY-------EKEQEIDFFGEISGISFSPDTESLF 458
+ +++DG+Y+AT +YDV +G E E++ D + I + FSPD L
Sbjct: 287 VNFSNDGKYLATGCNRS-AQIYDVDTGKKVHAFVDESEKDGDLY--IRSVCFSPDGNYLA 343
Query: 459 IGVWDRT 465
G D+T
Sbjct: 344 TGAEDKT 350
>sp|O54929|WSB2_MOUSE WD repeat and SOCS box-containing protein 2 OS=Mus musculus GN=Wsb2
PE=2 SV=2
Length = 404
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 12/176 (6%)
Query: 299 RDFDMGKYQLSKHFRFPWP--------VNHSSQSPDGKLLIIVGDNPDGLL--VDSMTGK 348
+ D G+ F PWP H Q+PD LI+ DG + + TG
Sbjct: 86 KTLDCGQIVWGLAFS-PWPSPPSRKLWARHHPQAPDVSCLILATGLNDGQIKIWEVQTGL 144
Query: 349 TIASLCGHLDFSFASAWHPNG-VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIR 407
+ +L GH D ++ P+G + + ++DKT RIWDL + + VL G+L +
Sbjct: 145 LLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCS 204
Query: 408 YTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWD 463
+ D + +A V ++ ++S + + FSPD+ L +D
Sbjct: 205 ISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYD 260
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 282 SPSGAVHFTASNNDCGVRDFDMGKY-----QLSKHFRFPWPVNHSSQSPDGKLLIIVGDN 336
+PSG++ +++ D +R +D+ K+ LS H ++ V S SPD +L
Sbjct: 162 TPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQW---VYCCSISPDCSMLCSAAGE 218
Query: 337 PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWD------LRNLS 390
L + I L GH + + P+ T + D + +WD LR+L
Sbjct: 219 KSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLH 278
Query: 391 ESVAVLKGN-----LGAIRSIRYTSDGRYMATAEPADFVHVYDVK 430
+ + + ++RS+ ++ +G Y+AT + ++ ++
Sbjct: 279 HTQLEPTMDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALE 323
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 324 SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 383
SPDGKLL ++ + D T + I L GH ++ + P+G +G+ D++ RI
Sbjct: 263 SPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRI 322
Query: 384 WDLR--NLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 441
WDLR S ++++ G + ++ + DG+ +A V V+D +G+ E+ +D
Sbjct: 323 WDLRTSQCSLTLSIEDG----VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVER-LDS 377
Query: 442 FGE--------ISGISFSPDTESLFIGVWDRT 465
E + ++FS + E + G DRT
Sbjct: 378 GNENGNGHEDSVYSVAFSNNGEQIASGSLDRT 409
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 288 HFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLL--------IIVGDNPDG 339
+ + D VR +D+ Q S V + SPDGKL+ + V D+ G
Sbjct: 310 RLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTG 369
Query: 340 LLVDSM-TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK- 397
LV+ + +G + GH D ++ A+ NG A+G+ D+T ++W L S+ + +
Sbjct: 370 FLVERLDSGNENGN--GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEV 427
Query: 398 ---GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 432
G+ + S+ T D Y+ + V +D SG
Sbjct: 428 TYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASG 465
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,624,692
Number of Sequences: 539616
Number of extensions: 8248418
Number of successful extensions: 30446
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 491
Number of HSP's that attempted gapping in prelim test: 26616
Number of HSP's gapped (non-prelim): 3300
length of query: 485
length of database: 191,569,459
effective HSP length: 121
effective length of query: 364
effective length of database: 126,275,923
effective search space: 45964435972
effective search space used: 45964435972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)